BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010028
(520 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224077862|ref|XP_002305441.1| predicted protein [Populus trichocarpa]
gi|222848405|gb|EEE85952.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/522 (75%), Positives = 436/522 (83%), Gaps = 43/522 (8%)
Query: 1 MEEA----KKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQV 56
MEE+ + K++PVLPWMRSPVDVS FE+ PLD LPCLDPRLK+ALQNMG +LFPVQ+
Sbjct: 1 MEESTIAKQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQI 60
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
AVWQETIGPG FERDLCINSPTGSGKTL+YALPIVQ LS RAV+CLRALVVLPTRDLAL
Sbjct: 61 AVWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLAL- 119
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
QVK VFAAIAPA+GLSVGLAVG
Sbjct: 120 --------------------------------------QVKQVFAAIAPAMGLSVGLAVG 141
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
QSSIADEISELIK+P+ EAGICYDP+DVLQELQS+VDILVATPGRLMDHI T+GFTLEH
Sbjct: 142 QSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDILVATPGRLMDHITTTKGFTLEH 201
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
LCYLVVDETDRLLRE+YQ+WLPTVL+LTR +E+ + FLP A GSLKTIRRCGVER
Sbjct: 202 LCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLVPGVNNFLPCASGSLKTIRRCGVER 261
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
GFK K YPRL KMVLSATLTQDP+KLAQL+LHHPLFLTTG+ RY+LPE+LESYKLIC SK
Sbjct: 262 GFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPEKLESYKLICVSK 321
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
LKPLYLVA+LQ LG EKCIVFTSSVESTHRLCTLLN FG+L++KIKEYSGLQRQSVRSKT
Sbjct: 322 LKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFGDLKVKIKEYSGLQRQSVRSKT 381
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
LKAFREG+IQVLVSSDAMTRGMD+EGV N++NYD PAY+KTY+HRAGRTARAGQ GRC T
Sbjct: 382 LKAFREGEIQVLVSSDAMTRGMDIEGVRNIINYDMPAYVKTYVHRAGRTARAGQTGRCIT 441
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
LL EVKRFKKLLQKADNDSCPI+SIPSS ++SL P Y S
Sbjct: 442 LLRTHEVKRFKKLLQKADNDSCPIYSIPSSSVKSLHPFYLSA 483
>gi|449433605|ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus]
gi|449490565|ref|XP_004158642.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus]
Length = 517
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/517 (76%), Positives = 431/517 (83%), Gaps = 39/517 (7%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
++ K+K +PVLPWMRSPVDVSL E+CPL+ LP LD RLK ALQNMGISSLFPVQ+AVWQE
Sbjct: 3 DKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQE 62
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
IGPG F+RDLCINSPTGSGKTL+YALPIVQ LS+R V+CLRALVVLPTRDLAL
Sbjct: 63 AIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLAL------ 116
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVK+VF+AIAPAVGLSVGLAVGQSSIA
Sbjct: 117 ---------------------------------QVKEVFSAIAPAVGLSVGLAVGQSSIA 143
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
DEISELIKRPKLEAGICYDP+D L ELQS+VDILVATPGRLMDHIN T+GFTL+HL YLV
Sbjct: 144 DEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLV 203
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 301
+DETDRLLREAYQ+WLPTVLQLT +D+ + + P + GSLKTIRR GVERGFK K
Sbjct: 204 IDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYISNPCSDGSLKTIRRFGVERGFKGK 263
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 361
PYPRL KMVLSATLTQDP KLAQLDLHHPLFLTTG+ RYKLPE+LESY +ICESKLKPLY
Sbjct: 264 PYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESKLKPLY 323
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 421
LVALLQSLGEEKCIVFTSSVESTHRLC+LLN F +L +KIKEYSGLQRQS+RSKTL AFR
Sbjct: 324 LVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELKIKEYSGLQRQSLRSKTLNAFR 383
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
G+IQVLVSSDAMTRGMDVEGV NV+NYD PA+IKTYIHRAGRTARAGQ GRCFTLL KD
Sbjct: 384 GGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLRKD 443
Query: 482 EVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
EVKRFKKLLQKADNDSCP+H++PSS IE L+P Y S
Sbjct: 444 EVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSA 480
>gi|225443938|ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
gi|297740757|emb|CBI30939.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/519 (74%), Positives = 431/519 (83%), Gaps = 40/519 (7%)
Query: 1 MEEAK-KKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
M+EAK KK++PVLPWMRSP+DVSLFE+CPL PCLDPRL+VAL+NMG SSLFPVQVAVW
Sbjct: 1 MKEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVW 60
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 119
QET+GPG FERDLCINSPTGSGKTL+YALPIV LS+RAV+CLRALVVLPTRDLAL
Sbjct: 61 QETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLAL---- 116
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
QVK+VFAAIAPAVGLSVGLAVGQ+S
Sbjct: 117 -----------------------------------QVKEVFAAIAPAVGLSVGLAVGQTS 141
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
IADEISELIKRPKLEAGICYDPED+ ELQS+VDILVATPGRLMDHIN T+GFTL+HL Y
Sbjct: 142 IADEISELIKRPKLEAGICYDPEDISLELQSSVDILVATPGRLMDHINTTKGFTLKHLRY 201
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LVVDETDRLLREAYQ+WLPTVLQLTRS +E+ F T LPS FGS+ TIRRCGVERGFK
Sbjct: 202 LVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTILPSTFGSMNTIRRCGVERGFK 261
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 359
+ YPRLVK+VLSATLTQDP+KLA LDLHHPL LT G+ RY+LPE+L+S+KLICESKLKP
Sbjct: 262 GRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEKLKSFKLICESKLKP 321
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
LYLVALL+ LG EKCIVFTSSVES HRLCTLLN FG+L+IKI EYSGLQ Q VRSKTL+
Sbjct: 322 LYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQIKIGEYSGLQHQRVRSKTLEE 381
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
FR GKIQVL+SSD MTRGMDVEGV NV+NYD P +IKTYIHRAGRTARAGQ GRCFTLL
Sbjct: 382 FRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKTYIHRAGRTARAGQTGRCFTLLR 441
Query: 480 KDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
KDE KRFK+LLQKAD+DSCP+HS+ S+ IE+L VY S
Sbjct: 442 KDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVSA 480
>gi|240255886|ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 1
gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis thaliana]
Length = 522
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/514 (68%), Positives = 410/514 (79%), Gaps = 39/514 (7%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E K + V+PWMR+PVDVS E+C LD LPCL+P+LK AL+NMGISSLFPVQVAVW E
Sbjct: 5 KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
TIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLAL
Sbjct: 65 TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLAL------ 118
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVKDVF AIAPAVGLSVG AVGQSSIA
Sbjct: 119 ---------------------------------QVKDVFDAIAPAVGLSVGSAVGQSSIA 145
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDHIN T+GFTLEHL YLV
Sbjct: 146 GEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLV 205
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 301
VDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+PSAFGSL+T+RR VERGFK K
Sbjct: 206 VDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGK 265
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 361
PYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+LE +LICE+ +KP+Y
Sbjct: 266 PYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVY 325
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 421
LVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYSG QS+RSK LKAFR
Sbjct: 326 LVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFR 385
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRTARAGQ GRCFTLL
Sbjct: 386 KGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNH 445
Query: 482 EVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
EV+RF KLL+K +DSCPI+ IP + ++S+R Y
Sbjct: 446 EVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATY 479
>gi|297804642|ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
lyrata]
gi|297316041|gb|EFH46464.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/514 (68%), Positives = 407/514 (79%), Gaps = 39/514 (7%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E K + V+PWMR+PVDVS E+C L+ LPCL+P+LK AL+NMGISSLFPVQVAVW E
Sbjct: 5 KEDKTEIDSVVPWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWHE 64
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
TIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLAL
Sbjct: 65 TIGPGGFERDICVNSPTGSGKTLSYALPIVQILASRPVRCLRALVVLPTRDLAL------ 118
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVKDVF AIAP VGLSVG AVGQSSIA
Sbjct: 119 ---------------------------------QVKDVFDAIAPTVGLSVGSAVGQSSIA 145
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
EIS+LIK PKL+AGICYDPED+ Q +SAVDILVATPGRLMDHIN T+GFTLEHL YLV
Sbjct: 146 GEISQLIKTPKLDAGICYDPEDLSQNFESAVDILVATPGRLMDHINNTKGFTLEHLRYLV 205
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 301
VDETDRLLREAYQ+WLPTVLQLT++ ++ F + F+PSAFGSL+T+RR VERGFK K
Sbjct: 206 VDETDRLLREAYQSWLPTVLQLTQTSDDGLFPSCTPFVPSAFGSLRTVRRQSVERGFKGK 265
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 361
PYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+LE +LICE+ +KP+Y
Sbjct: 266 PYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVY 325
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 421
LVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYSG QSVRSK LKAFR
Sbjct: 326 LVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSVRSKELKAFR 385
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRTARAGQ GRCFTLL
Sbjct: 386 KGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNH 445
Query: 482 EVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
EV+RF KLL+K +DSCPI+ IP + ++S+R Y
Sbjct: 446 EVRRFSKLLKKVGSDSCPIYPIPPTSLDSIRATY 479
>gi|255584180|ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 469
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/530 (67%), Positives = 405/530 (76%), Gaps = 76/530 (14%)
Query: 1 MEEAK--KKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
MEE+K KK++PVLPWMR PVD+ FE+C LD +PCLDPRLKVAL+NMG +SLF VQVAV
Sbjct: 1 MEESKLEKKNVPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVAV 60
Query: 59 WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
WQETIGPG FERDLCIN+PTGSGKTL+YALPI+Q LS R+++CLRAL+VLPTRDLALQV
Sbjct: 61 WQETIGPGNFERDLCINAPTGSGKTLAYALPIIQMLSTRSIKCLRALIVLPTRDLALQV- 119
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
K VFAA+APAVGLSVGLAVGQS
Sbjct: 120 --------------------------------------KQVFAALAPAVGLSVGLAVGQS 141
Query: 179 SIADEISELIKRPKLEAGICYDPEDV--LQELQSAVDILVATPGRLMDHINATRGFTLEH 236
SIA EISELIKRPKLEAGICYD +DV +QELQ++VDILVATPGRLMDHI T+GFTLEH
Sbjct: 142 SIAGEISELIKRPKLEAGICYDRDDVILMQELQTSVDILVATPGRLMDHITNTKGFTLEH 201
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
LCYL + ++ LTRS RF LP ++ VER
Sbjct: 202 LCYLHLLDS-----------------LTRSTLLLRF------LPIII----VLKDSSVER 234
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
GFK K YPRL KMVLSATLTQDP+KL QLDLHHPLFLTTG++RY+LPE+LESY++ICE K
Sbjct: 235 GFKGKSYPRLAKMVLSATLTQDPSKLVQLDLHHPLFLTTGQSRYQLPEKLESYRVICEPK 294
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
LKPLYLVALLQ+L EKCIVF SSVESTHRLCTLL FG+L++KIKEYSGLQ QSVRSKT
Sbjct: 295 LKPLYLVALLQNLVGEKCIVFASSVESTHRLCTLLKFFGDLKVKIKEYSGLQHQSVRSKT 354
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
LKAFREGKIQVLVSSDAMTRGMDVEGV NV+NYDKPAYIKTYIHRAGRTARAGQ+GRCFT
Sbjct: 355 LKAFREGKIQVLVSSDAMTRGMDVEGVRNVINYDKPAYIKTYIHRAGRTARAGQVGRCFT 414
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHSIPS------SLIESLRPVYKSGDV 520
LLHK+EV+ F+KLLQKADNDS P++S+P +L+ S P + SG V
Sbjct: 415 LLHKEEVRHFRKLLQKADNDSFPVYSLPPVTLSLFTLLMSQIPGWGSGTV 464
>gi|357491905|ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 497
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/519 (64%), Positives = 394/519 (75%), Gaps = 40/519 (7%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
M E K++S+P LPWMR PVDV+L + PL +P L P+LK AL++MGIS+LFPVQVAVW
Sbjct: 1 MGEEKQQSIPALPWMRDPVDVTLTQQLPLHSVPSLHPKLKSALEDMGISNLFPVQVAVWH 60
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
ET+GPG FERD+C+NSPTGSGKTL+YALP+VQ LS R +CLRALVV+PTRDLALQV
Sbjct: 61 ETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSGRVTKCLRALVVVPTRDLALQV--- 117
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
K VF A+A +GL VGLAVGQSS+
Sbjct: 118 ------------------------------------KQVFDAVASPLGLRVGLAVGQSSL 141
Query: 181 ADEISELIKRPKLEAGICYDPEDV-LQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
ADEISEL++ P + G CYDP + L QS VDILVATPGRLMDHIN T GFTLEHL Y
Sbjct: 142 ADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVATPGRLMDHINTTIGFTLEHLYY 201
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LVVDETDRLLREAYQ+WLPTVL+L +S+++ +++F P + +L+T RRCGVERGFK
Sbjct: 202 LVVDETDRLLREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSASALRTRRRCGVERGFK 261
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 359
DKPYPRL KMVLSATLTQDP +L QL+LHHPL L G+ RY+LPE LESYKLICE K+KP
Sbjct: 262 DKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYKLICEKKVKP 321
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
LYL+ALL+SLGEEKC+VFT SV+STHRLC LLN F +LRI IKEYS LQ Q VRSKTL
Sbjct: 322 LYLIALLKSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEYSSLQHQRVRSKTLNE 381
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
FR+G QVL+SSDA+TRGMDVEGV NV+NYD P +IKT++HRAGRTARAGQ GRCFTL+
Sbjct: 382 FRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQTGRCFTLMS 441
Query: 480 KDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
+DEV+RFKKL+ KA+ SC H +PSS IE+L Y+S
Sbjct: 442 EDEVRRFKKLIGKAEGGSCLDHIVPSSQIEALNTTYESA 480
>gi|5281020|emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
Length = 474
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/470 (69%), Positives = 376/470 (80%), Gaps = 39/470 (8%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
MGISSLFPVQVAVW ETIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRAL
Sbjct: 1 MGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRAL 60
Query: 106 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 165
VVLPTRDLAL QVKDVF AIAP
Sbjct: 61 VVLPTRDLAL---------------------------------------QVKDVFDAIAP 81
Query: 166 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 225
AVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDH
Sbjct: 82 AVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDH 141
Query: 226 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 285
IN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+PSAFGS
Sbjct: 142 INNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGS 201
Query: 286 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 345
L+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+
Sbjct: 202 LQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEK 261
Query: 346 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 405
LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYS
Sbjct: 262 LECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYS 321
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
G QS+RSK LKAFR+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRT
Sbjct: 322 GGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRT 381
Query: 466 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
ARAGQ GRCFTLL EV+RF KLL+K +DSCPI+ IP + ++S+R Y
Sbjct: 382 ARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATY 431
>gi|115449213|ref|NP_001048386.1| Os02g0795900 [Oryza sativa Japonica Group]
gi|122170850|sp|Q0DWT8.1|RH1_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 1
gi|113537917|dbj|BAF10300.1| Os02g0795900 [Oryza sativa Japonica Group]
gi|215740532|dbj|BAG97188.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 521
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 311/511 (60%), Positives = 370/511 (72%), Gaps = 42/511 (8%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 18 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 77
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLAL
Sbjct: 78 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLAL------------- 124
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
QVK+VF AIAP VGLSVG AVGQSSIADE+S LI
Sbjct: 125 --------------------------QVKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLI 158
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
++ K D E + E Q+ VDILVATPGRLMDHI+ T+GF+LEHL YLVVDETDR+
Sbjct: 159 EKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRM 218
Query: 249 LREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
LREAYQ+WLPTV+QLTRS ++N +SD + + L TIRR GVERGFK K +PRL
Sbjct: 219 LREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLHPLTTIRRSGVERGFKGKSFPRLA 276
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+SYKL+C+S LKPL L+ LLQ
Sbjct: 277 KIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSNLKPLSLIVLLQ 336
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
L EKC+VFTSSVES+HRL TLL F +L K EYS LQR+S R KTL AF+EGKI V
Sbjct: 337 ELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRLQRESTRRKTLDAFKEGKIDV 396
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
L+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFT L K EVK F
Sbjct: 397 LIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHEVKAFD 456
Query: 488 KLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
K+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 457 KMLKKADNSSCSLHSLPEESVETLRPVFSSA 487
>gi|47497023|dbj|BAD19076.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
gi|47497232|dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group]
Length = 517
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 311/511 (60%), Positives = 370/511 (72%), Gaps = 42/511 (8%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 14 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 73
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLAL
Sbjct: 74 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLAL------------- 120
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
QVK+VF AIAP VGLSVG AVGQSSIADE+S LI
Sbjct: 121 --------------------------QVKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLI 154
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
++ K D E + E Q+ VDILVATPGRLMDHI+ T+GF+LEHL YLVVDETDR+
Sbjct: 155 EKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRM 214
Query: 249 LREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
LREAYQ+WLPTV+QLTRS ++N +SD + + L TIRR GVERGFK K +PRL
Sbjct: 215 LREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLHPLTTIRRSGVERGFKGKSFPRLA 272
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+SYKL+C+S LKPL L+ LLQ
Sbjct: 273 KIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSNLKPLSLIVLLQ 332
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
L EKC+VFTSSVES+HRL TLL F +L K EYS LQR+S R KTL AF+EGKI V
Sbjct: 333 ELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRLQRESTRRKTLDAFKEGKIDV 392
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
L+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFT L K EVK F
Sbjct: 393 LIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHEVKAFD 452
Query: 488 KLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
K+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 453 KMLKKADNSSCSLHSLPEESVETLRPVFSSA 483
>gi|242066828|ref|XP_002454703.1| hypothetical protein SORBIDRAFT_04g035895 [Sorghum bicolor]
gi|241934534|gb|EES07679.1| hypothetical protein SORBIDRAFT_04g035895 [Sorghum bicolor]
Length = 519
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 316/520 (60%), Positives = 365/520 (70%), Gaps = 46/520 (8%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
EE +P LPWMR PVD+ F CP+ LP LDPRL ALQ MGI S FPVQ A W E
Sbjct: 10 EEGPADRVPHLPWMRCPVDIDTFSGCPVTQLPRLDPRLAEALQRMGIESFFPVQEAAWLE 69
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
TIGPG FERD+CINSPTGSGKTL+YALPIVQ L R VRCLRALVVLPTRDLAL
Sbjct: 70 TIGPGAFERDICINSPTGSGKTLAYALPIVQMLCKRKVRCLRALVVLPTRDLAL------ 123
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVK+VF AIAP VGLSVG AVGQSSIA
Sbjct: 124 ---------------------------------QVKEVFDAIAPVVGLSVGSAVGQSSIA 150
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
DE+S L+++PK E D E V E Q+ +DILVATPGRLMDHIN T GF+LEHL YLV
Sbjct: 151 DEVSRLVQKPKQEFYPTIDEEYVQMEPQTKIDILVATPGRLMDHINMTNGFSLEHLQYLV 210
Query: 242 VDETDRLLREAYQAWLPTVLQLTRS---DNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
+DETDR+LREAYQ+WLPTV+QLT S D+ D T L L TIRR GVERGF
Sbjct: 211 IDETDRMLREAYQSWLPTVIQLTHSIGQDHSWHDIDGKTLL----HPLTTIRRSGVERGF 266
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
K K YPRL K+VLSATLTQDP+KL+QL+LHHPL L +G+ RY++P +LESYKLIC+S LK
Sbjct: 267 KGKCYPRLAKIVLSATLTQDPSKLSQLELHHPLLLNSGKKRYRIPTKLESYKLICKSNLK 326
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
PL L+ LLQ L KC+VFTSSVES+HRL TLL F L K EYS LQR+S R KTL+
Sbjct: 327 PLSLIVLLQELQGNKCLVFTSSVESSHRLSTLLCFFENLPFKFSEYSRLQRESTRRKTLE 386
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFT L
Sbjct: 387 AFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFL 446
Query: 479 HKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
K EVK F K+L+KADN SC +HS+P IE+LRP + S
Sbjct: 447 RKHEVKTFDKMLKKADNASCSLHSLPEESIETLRPTFSSA 486
>gi|357137417|ref|XP_003570297.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Brachypodium
distachyon]
Length = 522
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 314/520 (60%), Positives = 365/520 (70%), Gaps = 46/520 (8%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E +P LPWMR PVD+ F CP+ LP LDPRL A+Q MGI S F VQVA W E
Sbjct: 12 DEGPSSRVPHLPWMRYPVDIDGFSGCPVARLPRLDPRLAEAVQRMGIESFFSVQVATWLE 71
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
TIGPG FERD+CINSPTGSGKTL+YALPIVQ LS R VRCLRALVVLPTRDLAL
Sbjct: 72 TIGPGAFERDICINSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLAL------ 125
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVK+VF AIAP VGLSV AVGQSSIA
Sbjct: 126 ---------------------------------QVKEVFDAIAPVVGLSVASAVGQSSIA 152
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
DEIS+LIK+ K E D E V E Q+ VDILVATPGRLMDHIN T+GF+LEHL YLV
Sbjct: 153 DEISDLIKKSKQELYATLDEEYVEMEPQTKVDILVATPGRLMDHINMTKGFSLEHLQYLV 212
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNEN---RFSDASTFLPSAFGSLKTIRRCGVERGF 298
VDETDR+LREAYQ+WLPTV+Q TRS N+N R + T L L T RR GVERGF
Sbjct: 213 VDETDRMLREAYQSWLPTVIQFTRSTNQNHPWRDTAGQTLL----HPLTTNRRSGVERGF 268
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
K K YPRL K+V SATLTQDP+KL+QL+LHHPL L +G+ RY++P +LESYKLIC + LK
Sbjct: 269 KGKCYPRLAKIVCSATLTQDPSKLSQLELHHPLLLNSGKKRYRIPTKLESYKLICTTNLK 328
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
PL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K E+S LQR+S R KTL
Sbjct: 329 PLCLIVLLQELHGEKCLVFTSSVESSHRLSTLLGFFEDLPFKFSEFSRLQRESTRRKTLA 388
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFTLL
Sbjct: 389 DFKEGKIDVLIGTDIMARGIHIDGLKYVINYDMPPYVKTYIHRAGRTARAGESGSCFTLL 448
Query: 479 HKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
K EVK F K+L+KAD+ SC + S+P IE+ RPV+ S
Sbjct: 449 RKHEVKTFDKMLKKADDSSCSLRSLPDESIETFRPVFSSA 488
>gi|125584003|gb|EAZ24934.1| hypothetical protein OsJ_08714 [Oryza sativa Japonica Group]
Length = 499
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 304/510 (59%), Positives = 360/510 (70%), Gaps = 58/510 (11%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 14 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 73
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLAL
Sbjct: 74 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLAL------------- 120
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
QVK+VF AIAP VGLSVG AVGQSSIADE+S LI
Sbjct: 121 --------------------------QVKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLI 154
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
++ K D E + E Q+ VDILVATPGRLMDHI+ T+GF+LEHL YLVVDETDR+
Sbjct: 155 EKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRM 214
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
LREAYQ+WLPTV+QLTRS ++N GVERGFK K +PRL K
Sbjct: 215 LREAYQSWLPTVIQLTRSSDQN-------------------HSWGVERGFKGKSFPRLAK 255
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 368
+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+SYKL+C+S LKPL L+ LLQ
Sbjct: 256 IVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSNLKPLSLIVLLQE 315
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
L EKC+VFTSSVES+HRL TLL F +L K EYS LQR+S R KTL AF+EGKI VL
Sbjct: 316 LRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRLQRESTRRKTLDAFKEGKIDVL 375
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFT L K EVK F K
Sbjct: 376 IGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHEVKAFDK 435
Query: 489 LLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 436 MLKKADNSSCSLHSLPEESVETLRPVFSSA 465
>gi|3445416|emb|CAA72041.1| DEAD box-like RNA helicase [Arabidopsis thaliana]
Length = 450
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 302/446 (67%), Positives = 352/446 (78%), Gaps = 39/446 (8%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLAL
Sbjct: 1 RDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLAL-------------- 46
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
QVKDVF AIAPAVGLSVG AVGQSSIA EIS+LIK
Sbjct: 47 -------------------------QVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIK 81
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDHIN T+GFTLEHL YLVVDETDRLL
Sbjct: 82 TPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLL 141
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
REAYQ+WLPTVLQLT++ +++ F + F+PSAFGSL+T+RR VERGFK KPYPRLVKM
Sbjct: 142 REAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKM 201
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
VLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+LE +LICE+ +KP+YL ALL+S
Sbjct: 202 VLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLGALLKSW 261
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
EKCI+FTSS E+T RLC LLN FG+ +IK KEYSG QS+RSK LKAFR+G IQVLV
Sbjct: 262 EGEKCIIFTSSGETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLV 321
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRTARAGQ GRCFTLL EV+RF KL
Sbjct: 322 ASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKL 381
Query: 490 LQKADNDSCPIHSIPSSLIESLRPVY 515
L+K +DSCPI+ IP + ++S+R Y
Sbjct: 382 LKKVGSDSCPIYPIPPTSLDSIRATY 407
>gi|125541460|gb|EAY87855.1| hypothetical protein OsI_09277 [Oryza sativa Indica Group]
Length = 499
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 304/510 (59%), Positives = 360/510 (70%), Gaps = 58/510 (11%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 14 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 73
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLAL
Sbjct: 74 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLAL------------- 120
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
QVK+VF AIAP VGLSVG AVGQSSIADE+S LI
Sbjct: 121 --------------------------QVKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLI 154
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
++ K D E + E Q+ VDILVATPGRLMDHI+ T+GF+LEHL YLVVDETDR+
Sbjct: 155 EKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRM 214
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
LREAYQ+WLPTV+QLTRS ++N GVERGFK K +PRL K
Sbjct: 215 LREAYQSWLPTVIQLTRSSDQN-------------------HSWGVERGFKGKSFPRLAK 255
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 368
+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+SYKL+C+S LKPL L+ LLQ
Sbjct: 256 IVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSNLKPLSLIVLLQE 315
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
L EKC+VFTSSVES+HRL TLL F +L K EYS LQR+S R KTL AF+EGKI VL
Sbjct: 316 LRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRLQRESTRRKTLDAFKEGKIDVL 375
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFT L K EVK F K
Sbjct: 376 IGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHEVKAFDK 435
Query: 489 LLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 436 MLKKADNSSCSLHSLPEESVETLRPVFSSA 465
>gi|413939310|gb|AFW73861.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
1 [Zea mays]
gi|413939311|gb|AFW73862.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
2 [Zea mays]
Length = 523
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 311/517 (60%), Positives = 362/517 (70%), Gaps = 46/517 (8%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
EE +P LPWMR PVD+ F P+ LP LDPRL ALQ MGI S FPVQ A W E
Sbjct: 10 EEGPADRVPHLPWMRYPVDIDTFSGRPVTQLPRLDPRLVEALQRMGIESFFPVQEAAWLE 69
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
TIGPG FERD+CINSPTGSGKTL+YALPIVQ L R VRCLRALVVLPTRDLAL
Sbjct: 70 TIGPGAFERDICINSPTGSGKTLAYALPIVQMLCTRKVRCLRALVVLPTRDLAL------ 123
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVK+VF AIAP VGLSVG AVGQSSIA
Sbjct: 124 ---------------------------------QVKEVFDAIAPVVGLSVGSAVGQSSIA 150
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
DE+S L+++P+ E D E V E ++ +DILVATPGRLMDHIN T GF+LEHL YLV
Sbjct: 151 DEVSSLVQKPRQEFYPTIDKEYVQMEPRTKIDILVATPGRLMDHINMTNGFSLEHLQYLV 210
Query: 242 VDETDRLLREAYQAWLPTVLQLTRS---DNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
+DETDR+LREAYQ+WLPTV+QLT S D+ D T L L TIRR GVERGF
Sbjct: 211 IDETDRMLREAYQSWLPTVIQLTHSIGQDHSCHDIDGKTLL----HPLTTIRRSGVERGF 266
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
K K YPRL K+VLSATLTQDP+KL+QL+LHHPL L +G+ RY++P +LESYKLIC+S LK
Sbjct: 267 KSKCYPRLAKIVLSATLTQDPSKLSQLELHHPLLLNSGKKRYRIPTKLESYKLICKSNLK 326
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
PL L+ LLQ L KC+VFTSSVES+HRL TLL F L K EYS LQR+S R KTL+
Sbjct: 327 PLSLIVLLQELQGNKCLVFTSSVESSHRLSTLLRFFENLPFKFSEYSRLQRESTRRKTLE 386
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFT L
Sbjct: 387 AFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFL 446
Query: 479 HKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
K EVK F K+L+KADN C +HS+P IE+LRP +
Sbjct: 447 RKHEVKTFDKMLKKADNAGCNLHSLPEESIETLRPAF 483
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 293/511 (57%), Positives = 344/511 (67%), Gaps = 86/511 (16%)
Query: 11 VLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQETIGPGLFE 69
VLPWMR PVD++ + P+ +P + RL+ L+ NMGIS LFPVQVA+WQET+GPG FE
Sbjct: 166 VLPWMRHPVDITRCPELPVCSVPLMKRRLQSVLEENMGISKLFPVQVALWQETVGPGDFE 225
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RDLCINSPTGSGKTL+YALPIVQ L LRALVV+PTRDLALQV
Sbjct: 226 RDLCINSPTGSGKTLAYALPIVQNLFTNPGGRLRALVVVPTRDLALQV------------ 273
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
K VF A+A +GL +GLA GQSS+ E+S LI
Sbjct: 274 ---------------------------KRVFDALASPLGLRIGLAAGQSSLRHELSSLIY 306
Query: 190 RPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
P + G DP L L QS VDILVATPGRL+DH+N +L+HL YLVVDE DR
Sbjct: 307 LPGEDDGP--DP-GFLSPLWFQSKVDILVATPGRLVDHVNK---LSLKHLRYLVVDEADR 360
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
LLRE YQ+WLPTVL+LT+S RL
Sbjct: 361 LLREDYQSWLPTVLKLTQS--------------------------------------RLA 382
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
K+VLSATLT+DP +LAQL+LHHPLFL+ G+ RY+LPE LE YKLICE K+KPLYLVALL+
Sbjct: 383 KIVLSATLTRDPGRLAQLNLHHPLFLSAGKMRYRLPEYLECYKLICERKVKPLYLVALLK 442
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
SLGEEKCIVFT SVESTH LC LLN FG+L+I IKE+SGL+ Q VRSKT+ FR G+ QV
Sbjct: 443 SLGEEKCIVFTRSVESTHHLCKLLNCFGDLKIGIKEFSGLKHQRVRSKTVGEFRRGEFQV 502
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
LVSSDAMTRGMDVEGV NV+NYD P Y KTY+HRAGRTARAGQ GRCFTL+ KDEV RFK
Sbjct: 503 LVSSDAMTRGMDVEGVRNVINYDMPKYTKTYVHRAGRTARAGQTGRCFTLMSKDEVXRFK 562
Query: 488 KLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
KL++KA+ C +++PSSLIE+L Y+S
Sbjct: 563 KLMKKAEASDCLEYTVPSSLIEALHSTYQSA 593
>gi|302794133|ref|XP_002978831.1| hypothetical protein SELMODRAFT_109199 [Selaginella moellendorffii]
gi|300153640|gb|EFJ20278.1| hypothetical protein SELMODRAFT_109199 [Selaginella moellendorffii]
Length = 513
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 276/515 (53%), Positives = 343/515 (66%), Gaps = 52/515 (10%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K+ PVL WMR P+DV+ FE+ LD +P L P L +L+N+GI SLFPVQ AVW ET+GPG
Sbjct: 3 KAPPVLQWMRQPLDVNSFEEQSLDSVPFLHPGLMESLRNVGIHSLFPVQAAVWHETVGPG 62
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
RDL I+SPTGSGKTL+Y+LPI Q+LS +R LRAL+V+PTRDLA+
Sbjct: 63 GGARDLSISSPTGSGKTLAYSLPIAQSLSQCLLRRLRALIVVPTRDLAM----------- 111
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
QVK VF AIAP+VGLSVG+AVGQ+S+A E S+
Sbjct: 112 ----------------------------QVKQVFDAIAPSVGLSVGIAVGQTSVAAEASQ 143
Query: 187 LIKRPKLEAGICYD----PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 242
L+ P + C+ D L E S VDILVATPGRLMDHI T GFTLEHL YLVV
Sbjct: 144 LVLFPG-KIDTCFRELHLASDNLAE--SRVDILVATPGRLMDHIQNTPGFTLEHLQYLVV 200
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DETDRLLREAYQ WLPTVL+ + N FS + P GS++TIRR +ERG K
Sbjct: 201 DETDRLLREAYQEWLPTVLEAASAKN---FSPSDDSNP-GIGSVRTIRRSCLERGIKGCV 256
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETRYKLPERLESYKLICESKLKPL 360
PRL K+++SATLT+DP K+AQL L+HPL L+T + YKLPE+L SY +IC+++ KPL
Sbjct: 257 VPRLQKIIVSATLTRDPAKIAQLRLYHPLSVALSTSDNLYKLPEQLRSYTIICKAQQKPL 316
Query: 361 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 420
LV LL SLG+++ ++FTSSV +THRL T L F +L + EYS Q Q RSK L AF
Sbjct: 317 KLVTLLHSLGDQRTVIFTSSVSNTHRLSTFLACFEDLPFRAVEYSSFQHQLARSKALAAF 376
Query: 421 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
R G+ QVLV+SDAM RGMDVEGV +++NYD P + +TY+HR GRTARAG+ G CFTLL K
Sbjct: 377 RAGEAQVLVASDAMARGMDVEGVTHIINYDMPPFARTYVHRVGRTARAGRSGSCFTLLRK 436
Query: 481 DEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+EV+ FK +L K N SC + + S + LRP Y
Sbjct: 437 EEVRYFKSILAKVQNSSCKTYKVSSESTKELRPRY 471
>gi|302787757|ref|XP_002975648.1| hypothetical protein SELMODRAFT_174931 [Selaginella moellendorffii]
gi|300156649|gb|EFJ23277.1| hypothetical protein SELMODRAFT_174931 [Selaginella moellendorffii]
Length = 513
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 276/515 (53%), Positives = 342/515 (66%), Gaps = 52/515 (10%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K+ PVL WMR P+DV FE+ LD +P L P L +L+N+GI SLFPVQ AVW ET+GPG
Sbjct: 3 KAPPVLQWMRQPLDVKSFEEQSLDSVPFLHPGLMESLRNVGIHSLFPVQAAVWHETVGPG 62
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
RDL I+SPTGSGKTL+Y+LPI Q+LS R +R LRAL+V+PTRDLA+
Sbjct: 63 GGARDLSISSPTGSGKTLAYSLPIAQSLSQRLLRRLRALIVVPTRDLAM----------- 111
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
QVK VF AIAP+VGLS+G+AVGQ+S+A E S+
Sbjct: 112 ----------------------------QVKQVFDAIAPSVGLSIGIAVGQTSVAAEASQ 143
Query: 187 LIKRPKLEAGICYD----PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 242
L+ P + C+ D L E S VDILVATPGRLMDHI T GFTLEHL YLVV
Sbjct: 144 LVLFPG-KTDTCFRELHLASDNLPE--SRVDILVATPGRLMDHIQNTPGFTLEHLQYLVV 200
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DETDRLLREAYQ WLPTVL+ N FS + P GS++TIRR +ERG K
Sbjct: 201 DETDRLLREAYQEWLPTVLEAATGKN---FSPSDDSNP-GIGSVRTIRRSCLERGIKGCV 256
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETRYKLPERLESYKLICESKLKPL 360
PRL K+++SATLT+DP K+AQL L+HPL L+T + YKLPE+L SY +IC+++ KPL
Sbjct: 257 VPRLQKIIVSATLTRDPAKIAQLGLYHPLSIALSTSDNLYKLPEQLRSYTIICKAQQKPL 316
Query: 361 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 420
LV LL SLG+++ ++FTSSV +THRL T L F +L + EYS Q Q RSK L AF
Sbjct: 317 KLVTLLHSLGDQRTVIFTSSVSNTHRLSTFLACFEDLPFRAVEYSSFQHQLARSKALAAF 376
Query: 421 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
R G+ QVLV+SDAM RGMDVEGV +++NYD P + +TY+HR GRTARAG+ G CFTLL K
Sbjct: 377 RAGEAQVLVASDAMARGMDVEGVTHIINYDMPPFARTYVHRVGRTARAGRSGSCFTLLRK 436
Query: 481 DEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+EV+ FK +L K N SC + + S + LRP Y
Sbjct: 437 EEVRYFKSILAKVQNSSCKTYKVSSESTKELRPRY 471
>gi|356554249|ref|XP_003545461.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 492
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/511 (51%), Positives = 323/511 (63%), Gaps = 86/511 (16%)
Query: 11 VLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQETIGPGLFE 69
VLPWMR PVD++ ++ P+ +P + RL++ L+ NMGIS LFPV V +WQET+GP FE
Sbjct: 41 VLPWMRHPVDITRCQELPVCSVPLMKWRLQLVLEVNMGISKLFPVXVTLWQETVGPSDFE 100
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RDLCINSPTG GKTL+YALP++Q L CLRALVV+PT D ALQV
Sbjct: 101 RDLCINSPTGRGKTLAYALPLIQNLFTDPGGCLRALVVVPTHDFALQV------------ 148
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
K VF A+A +GL +GLA GQSS+ E S LI
Sbjct: 149 ---------------------------KRVFDALASLLGLRIGLAAGQSSLRHEFSSLIF 181
Query: 190 RPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
P+ + G L L QS V+ILVAT GRL+DH+N +L+HL YLVVDE DR
Sbjct: 182 LPREDDG---PNPGFLSSLWFQSKVNILVATLGRLVDHVNK---LSLKHLRYLVVDEADR 235
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
L E YQ+WLPTV++LT+ FG L
Sbjct: 236 FLHEDYQSWLPTVIKLTQ-----------------FG---------------------LA 257
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
K+VL A LT+ P +LAQL LH+ LFL+ G+ Y+LPE LE YKLICE K+KPLYLVALL+
Sbjct: 258 KIVLFAMLTRGPGRLAQLILHYLLFLSAGKMCYRLPEYLECYKLICERKVKPLYLVALLK 317
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
SLGEEKCIVFT VESTH LC LLN FG+L+I IKE+SGL+ Q VRSKT+ F+ + QV
Sbjct: 318 SLGEEKCIVFTRFVESTHHLCKLLNFFGDLKIGIKEFSGLKHQQVRSKTVGEFQRREFQV 377
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
LVSSDAMTR MDVEG+ NV+NYD P Y KTY+HR GRTARAGQ G CFTL+ KDEV F+
Sbjct: 378 LVSSDAMTRVMDVEGLRNVINYDVPKYTKTYVHRPGRTARAGQTGCCFTLMSKDEVGGFE 437
Query: 488 KLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
KL++KA+ C H++PSSLIE+L Y S
Sbjct: 438 KLMKKAEASDCLQHTVPSSLIEALHSTYSSA 468
>gi|326532600|dbj|BAK05229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/393 (60%), Positives = 277/393 (70%), Gaps = 40/393 (10%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+EA ++ +P LPWMR PVD+ F CP+ LP LDPRL ALQ MGI S FPVQV+ W E
Sbjct: 11 DEAPEERVPHLPWMRHPVDIDSFSACPVASLPRLDPRLAEALQRMGIESFFPVQVSAWLE 70
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
TIGPG F+RD+CINSPTGSGKTL+YALPIVQ LS R VRCLRALVVLPTRDLAL
Sbjct: 71 TIGPGAFQRDICINSPTGSGKTLAYALPIVQMLSTRKVRCLRALVVLPTRDLAL------ 124
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVK+VF AIAP VGL+V AVGQSSIA
Sbjct: 125 ---------------------------------QVKEVFDAIAPVVGLTVASAVGQSSIA 151
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
DEIS+LIK+ K E D E V E Q+ VDILVATPGRLMDHIN T+GF+LEHL YLV
Sbjct: 152 DEISDLIKKSKQELYPSLDDEYVEMEPQTKVDILVATPGRLMDHINMTKGFSLEHLQYLV 211
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 301
VDETDR+LREAYQ+WLPTV+Q TR ++ F +T + L TIRR GVERGFK K
Sbjct: 212 VDETDRMLREAYQSWLPTVIQFTRPTKQDLFRHDTTGR-TLLHPLTTIRRSGVERGFKGK 270
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 361
YPRL K+V SATLTQDP+KL+QL+LHHPL L +G+ RY++PE+LESYKLIC S +KPL
Sbjct: 271 CYPRLAKIVCSATLTQDPSKLSQLELHHPLLLNSGKKRYRIPEKLESYKLICTSNIKPLC 330
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
L+ LLQ L EKC+VFT SV+ +HRL TLL F
Sbjct: 331 LIVLLQELRGEKCLVFTKSVDDSHRLSTLLGFF 363
>gi|168044025|ref|XP_001774483.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674195|gb|EDQ60707.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 462
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/486 (51%), Positives = 317/486 (65%), Gaps = 50/486 (10%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K P LPWMRSPV++++ + +D +P LD RL+ AL+ GI +LFPVQVAVW + +GPG
Sbjct: 14 KGPPALPWMRSPVEIAIHDPLSVDEVPLLDSRLQEALRKAGIEALFPVQVAVWNQVLGPG 73
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
ERDLC+ SPTGSGKTLS+ALPIVQ LS R +R LRALVVLPTRDLA+QV
Sbjct: 74 GRERDLCVCSPTGSGKTLSFALPIVQLLSTRVLRRLRALVVLPTRDLAVQV--------- 124
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
K VF +APAVGLSVG+ VGQS++A E+ E
Sbjct: 125 ------------------------------KSVFDILAPAVGLSVGI-VGQSTVAAEVGE 153
Query: 187 LIK-RPKLEAGI-CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
L+K R +L Y+ + +S +DILVATPGRLMDH+ T GFT+EHL YLVVDE
Sbjct: 154 LVKTRSRLVHSFETYEAVENNLVYESCIDILVATPGRLMDHLKNTPGFTVEHLQYLVVDE 213
Query: 245 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF---GSLKTIRRCGVERGFKDK 301
TDRLLR+ YQ+WLP VL + + RF D S G T RR +ERG K +
Sbjct: 214 TDRLLRQDYQSWLPNVLNVIQI--PERFDDVSRRKAQCLRGTGVAFTQRRWCLERGSKGR 271
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL--TTGETRYKLPERLESYKLICESKLKP 359
+PR++K +LSATLT+DP K+AQLDL+ PL+L + E+RY LP++L+++KLI + KP
Sbjct: 272 VHPRVMKFLLSATLTKDPAKIAQLDLYWPLYLAPSAEESRYHLPKQLKAFKLITRASKKP 331
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-GELRIKIKEYSGLQRQSVRSKTLK 418
L LVALL+ + I+F +SVE+TH+L LL HF + EYS Q Q +R K L
Sbjct: 332 LVLVALLEQFKNQSTIIFNASVEATHQLFLLLRHFYAGQEFSVVEYSSRQPQHIRRKALA 391
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F +GK+ V+V+SDAMTRGMDVEGV NV+NYD P Y KTY+HR GRTARAGQ GR FTLL
Sbjct: 392 DFTDGKVHVIVASDAMTRGMDVEGVANVINYDVPVYAKTYVHRVGRTARAGQAGRAFTLL 451
Query: 479 HKDEVK 484
K EV
Sbjct: 452 VKKEVN 457
>gi|2326341|emb|CAA72069.1| RH1 protein [Arabidopsis thaliana]
Length = 244
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/244 (72%), Positives = 211/244 (86%)
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F
Sbjct: 1 PGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPF 60
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
+PSAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +
Sbjct: 61 VPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGS 120
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
RY+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +
Sbjct: 121 RYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPK 180
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
IK KEYSG QS+RSK LKAFR+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+
Sbjct: 181 IKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTF 240
Query: 459 IHRA 462
IHRA
Sbjct: 241 IHRA 244
>gi|384254028|gb|EIE27502.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 562
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 222/538 (41%), Positives = 291/538 (54%), Gaps = 100/538 (18%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI 63
A K+ PVLPWMR P+ + + PL+ + LD RL+ AL+ G LFPVQ A WQ T
Sbjct: 80 ADGKNQPVLPWMRLPIKIEAGQGVPLEDVRGLDSRLQDALKACGFVELFPVQAAAWQVTA 139
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
G DLCI++PTGSGKTL+YALPI+Q L R V LR LVVLPTRDLA QV
Sbjct: 140 GGHSAAHDLCISAPTGSGKTLAYALPILQGLLGRCVPRLRCLVVLPTRDLAAQVFK---- 195
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
VFA + P +GL VG+A Q+S+ E
Sbjct: 196 -----------------------------------VFADLCPPLGLRVGMAAAQTSVGTE 220
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQS-----------AVDILVATPGRLMDHINATRGF 232
+ L D +++ QS AVDILVATPGRLM H+ T G
Sbjct: 221 AATLFP-------------DAIRDQQSIRGMAAVSNSSAVDILVATPGRLMAHLKGTPGA 267
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
TL L YLV+DETDRLLR+AYQ WLP V T + +R
Sbjct: 268 TLNDLRYLVIDETDRLLRQAYQDWLPFVTAATVGGPGD----------------PPVRGP 311
Query: 293 GVE--RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------ 338
G + RG P ++K+V SATLT+DP+K+ +L L+ P ++ G +
Sbjct: 312 GGQPVRG----PQRHVLKIVASATLTRDPSKIERLGLNCPRYIALGASDHRHATILHLLS 367
Query: 339 ---RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
Y +P+ L+ +K++C KP+ VALL+ L E ++FT+SVE+T RL LL+
Sbjct: 368 HAREYAMPKSLKEFKVVCAGADKPVLAVALLRQLANEPTLIFTASVEATRRLFVLLHAVP 427
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
LR + E+S L R+ TL AFR G ++LV+SD MTRGMDV V NVVNYD P Y
Sbjct: 428 SLRESVLEFSSLNSGPERAATLAAFRGGDARILVASDGMTRGMDVPSVANVVNYDAPIYA 487
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRP 513
KTY+HRAGRTAR G+ GR FTLL +EV+ FK LL+K DN +++P + +++ RP
Sbjct: 488 KTYVHRAGRTARGGREGRVFTLLRTEEVRHFKGLLRKVDNAFVKDYALPKADVDAARP 545
>gi|302839717|ref|XP_002951415.1| hypothetical protein VOLCADRAFT_61333 [Volvox carteri f.
nagariensis]
gi|300263390|gb|EFJ47591.1| hypothetical protein VOLCADRAFT_61333 [Volvox carteri f.
nagariensis]
Length = 654
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 217/531 (40%), Positives = 301/531 (56%), Gaps = 63/531 (11%)
Query: 3 EAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQN-MGISSLFPVQVAVWQE 61
E + PVLPWM P+ + P++ + LD RL L+N G LFPVQ AVWQ
Sbjct: 24 ETSGGAGPVLPWMCVPLTIESGSGIPVEKVLGLDARLASQLRNGFGFPELFPVQTAVWQH 83
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
+ G DLC+ +PTGSGKTL+YALP+V +L++ V CLRALVVLPTRDLA+QV
Sbjct: 84 SAGGTSTAHDLCVAAPTGSGKTLAYALPVVNSLAD--VGCLRALVVLPTRDLAVQVY--- 138
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
DVF + AV L+V LA ++S A
Sbjct: 139 ------------------------------------DVFRPLCDAVQLNVALAAARTSEA 162
Query: 182 DEISELIKRPKLEAG----ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
E + ++ P + + + D+LVATPGRLM H++ + G +L HL
Sbjct: 163 AEAAAIVGLPASSSSSSPFVAGGGSAAAPGCRRGADVLVATPGRLMSHLSGSPGVSLRHL 222
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL-KTIRRCGVER 296
+LV DETDRLLR++YQ+WLP +L + + + + + P FGSL + RR +
Sbjct: 223 RFLVADETDRLLRQSYQSWLP---RLPEAVPKPKLHISPSDSPILFGSLPRHARRSASSQ 279
Query: 297 GFKDKPYP--RLVKMVLSATLTQDPNKLAQLDLHHPLFL-----------TTGETRYKLP 343
+ + R+VK+V+SATLT+DP KL +L LHHP F+ RY LP
Sbjct: 280 TYIPCTHVMCRVVKIVVSATLTRDPAKLQRLALHHPRFVATATAAGGGGGGAAAGRYSLP 339
Query: 344 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 403
L Y+L+C + KPL L+ALLQ + IVFTSS+E TH+L +L+ +L ++ E
Sbjct: 340 RSLSEYRLMCSAARKPLVLLALLQEWSGQSTIVFTSSLEMTHKLFLMLSAVQDLPDEVVE 399
Query: 404 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 463
YS L R+ L+ FR G +++LV+SDAMTRGMDV+ V NV+NYD P Y KTY+HRAG
Sbjct: 400 YSSLVPVRARAAALERFRTGSVELLVASDAMTRGMDVDCVQNVINYDAPVYAKTYVHRAG 459
Query: 464 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
RTARAG+ GR TLL ++++ FK ++ KADN+ + +PS +E+LRP
Sbjct: 460 RTARAGKPGRVITLLRDEDMRHFKAMIHKADNNFVREYKLPSERVEALRPA 510
>gi|356554241|ref|XP_003545457.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 333
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 209/412 (50%), Positives = 255/412 (61%), Gaps = 86/412 (20%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQ 60
EE ++ S+ VLPWMR PVD++ +++ P+ +P + RL+ L+ NMGIS LFPVQV +W
Sbjct: 3 EEKQQPSVVVLPWMRHPVDITRYQELPICSVPLMKRRLQSVLEKNMGISKLFPVQVTLWX 62
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
ET+GPG FERDLCI P SGKTL+YA PIVQ LS LRALVV+PTRDL+LQV
Sbjct: 63 ETVGPGDFERDLCIKLPIESGKTLAYAFPIVQNLSTDTGGRLRALVVVPTRDLSLQV--- 119
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
K VF A+A +GL + LA QSS+
Sbjct: 120 ------------------------------------KRVFDALASLLGLRICLATDQSSL 143
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLMDHINATRGFTLEHLC 238
++S LI P + G DP L L QS VDILV TPGRL+DH+N +L+HL
Sbjct: 144 RHKLSSLIYLPGEDDG--QDP-GFLSSLWFQSKVDILVVTPGRLVDHVNK---LSLKHLR 197
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
YL+VDE DRLLRE YQ+WLPTVL+LT+S
Sbjct: 198 YLMVDEADRLLREDYQSWLPTVLKLTQS-------------------------------- 225
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
RL K+VLSATLT+DP +LAQL+LHHPLFL+TG+ RY+LPE LE YKLICE K+K
Sbjct: 226 ------RLTKIVLSATLTRDPGRLAQLNLHHPLFLSTGKMRYRLPEYLECYKLICERKVK 279
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 410
PLYLVALL+SLGEE CIVFT SVESTH LC LLN FG+L+I IKE+S L+ Q
Sbjct: 280 PLYLVALLKSLGEENCIVFTRSVESTHHLCKLLNCFGDLKIGIKEFSSLKHQ 331
>gi|356528222|ref|XP_003532704.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 341
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 207/412 (50%), Positives = 254/412 (61%), Gaps = 86/412 (20%)
Query: 5 KKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQ-NMGISSLFPVQVAVWQETI 63
++ S+ +LPWM PVD++ ++ P+ +P ++ RL+ L+ NMGIS LF VQVA+WQET+
Sbjct: 2 EQPSVAILPWMHHPVDITRCQELPVCSVPLMERRLQSVLEENMGISKLFSVQVALWQETV 61
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
G FERDLCINSPT SGKTL+YALPIVQ LS L ALVV+PTRDLALQV
Sbjct: 62 GSDDFERDLCINSPTESGKTLAYALPIVQNLSTNTSDRLFALVVVPTRDLALQV------ 115
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
K VF A+A ++GL +GLA GQSS+ E
Sbjct: 116 ---------------------------------KRVFDALASSLGLHIGLAAGQSSLRHE 142
Query: 184 ISELIKRPKLEAGICYDPEDVLQEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
+S LI P + G DP L L QS V+ILVATPGRLMDH+N +L+HL YLV
Sbjct: 143 LSSLIYLPGEDDG--PDP-GFLSPLWFQSKVNILVATPGRLMDHVNK---LSLKHLRYLV 196
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 301
VDE DRLLRE YQ+WLPTVL+LT+
Sbjct: 197 VDEADRLLREDYQSWLPTVLKLTQF----------------------------------- 221
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 361
RL K+VLS LT DP +LA L+LHHPLFL+ G+ RY+L E LE +KLICE K+KPLY
Sbjct: 222 ---RLAKIVLSVILTLDPGRLAXLNLHHPLFLSAGKMRYRLLEYLECFKLICERKVKPLY 278
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 413
LV LL+SLG+EKCIVFT SVESTH LC LLN FG+L+I IKE+SGL+ Q V+
Sbjct: 279 LVTLLKSLGKEKCIVFTRSVESTHHLCKLLNCFGDLKIGIKEFSGLKHQLVQ 330
>gi|194214438|ref|XP_001915702.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Equus caballus]
Length = 550
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 283/545 (51%), Gaps = 98/545 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V+ ++ +D P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 54 KVQPFLPAWLAEPSCVEKNVTKDLVPIEDVPEVHPDLQKKLRAHGISSYFPVQAAVIPAL 113
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 114 LESMANGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPLVQALLHRAVCQVRALVVLPTKE 173
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 174 LAQQVS---------KVFNVYTD------------------------------ATPLRVA 194
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ ++A E L++R + + DI+VATPGRL+DHI+ T GF
Sbjct: 195 LVTGQKTLAKEQETLVQR-------------TVDGFRCLADIVVATPGRLVDHIDQTPGF 241
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQ--LTRSDNENRFSDASTFLPSAFGSLKTIR 290
+L+ L +LV+DE DR++ +Q+WLP V+ R ++ FS P A + T
Sbjct: 242 SLQQLRFLVIDEADRMIDSMHQSWLPRVMAAAFPREGTKSLFSLLQRRQPQAITAASTC- 300
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------------- 336
C P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 301 -C---------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAQRGSRDADAEAD 350
Query: 337 ---ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
+Y P L + + C + KPL ++ L+ + + + FT+S E++HRL L
Sbjct: 351 GESAGKYTFPAGLTHHYVPCSLRSKPLVVLHLVLEMNFSRVLCFTNSRENSHRLFLLAQA 410
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
FG + + E+S R LK F +GKIQ+L+S+DAM RG+DV+GV VVNYD P
Sbjct: 411 FGG--VSVAEFSSRYGPGQRKMILKQFEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQ 468
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRP 513
Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L + H PS L++ L P
Sbjct: 469 YLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLAEGGVPELERHDTPSKLLQPLVP 528
Query: 514 VYKSG 518
Y++
Sbjct: 529 RYEAA 533
>gi|109099284|ref|XP_001105887.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Macaca mulatta]
Length = 664
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 278/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 171 KVQPFLPRWLAEPSCVRKNVNEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 230
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 231 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 290
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QVN +F + D A L V
Sbjct: 291 LAQQVN---------KVFNIYTD------------------------------ATPLRVS 311
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 312 LITGQKSLAKEQESLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGF 358
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L+ L +LV+DE DR++ +Q+WLP V+ F P A + ++
Sbjct: 359 NLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPTDPCALLQRRQVQ-- 409
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------------- 339
V P L K++ SATLTQ+P KL QL LH P +TG R
Sbjct: 410 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLARRGLEDTDGDGDLG 469
Query: 340 -YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
Y P L + + C KPL ++ L+ +G K + FT+S E++HRL L+ FG
Sbjct: 470 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSKVLCFTNSRENSHRLFLLVQAFGG-- 527
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R + LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 528 VDVAEFSSRYGPGQRRRILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 587
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HRAGRTARAG++G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 588 VHRAGRTARAGKMGQAFTLLLKVQERRFLQMLTEAGAPELRRHELSSKLLQPLVPRYE 645
>gi|344299254|ref|XP_003421302.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Loxodonta africana]
Length = 690
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 278/541 (51%), Gaps = 94/541 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P+LP W+ P V + E P+ +P + P L+ L+ GISS FPVQ AV
Sbjct: 194 KVQPLLPTWLAEPSWVGKKVTEHLVPIQDIPEVHPDLQRKLRAQGISSYFPVQAAVIPAL 253
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G F RDLC+++PTGSGKTL++ +P+VQTL +R V +RALVVLPT++
Sbjct: 254 LESAAGGFLVGRGGFRPRDLCVSAPTGSGKTLAFVIPVVQTLLHRVVCRIRALVVLPTKE 313
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QVN +F + D A L V
Sbjct: 314 LAQQVN---------RVFNIYTD------------------------------ATPLRVA 334
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + C DI+VATPGRL+DHI+ T GF
Sbjct: 335 LVTGQKSLAKEQESLVQK-SADGYRCL------------ADIVVATPGRLVDHIDQTAGF 381
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +LV+DE DR++ +Q+WLP V+ F P A +R
Sbjct: 382 SLQQLRFLVIDEADRMVDSMHQSWLPRVVAAA-------FQSQGPADPCALLQRGPLR-- 432
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-ETR------------ 339
V P L K++ SATLTQ+P KL QL LH P + G E+R
Sbjct: 433 AVTAASTWAPQMPLQKLLFSATLTQNPEKLQQLALHQPRLFSAGLESRGLEGTGDDVAGD 492
Query: 340 ----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
Y PE L + + C KPL ++ L+ ++ + + FT+S E++HRL L+ FG
Sbjct: 493 MGGKYAFPEGLAHHYVPCSLSTKPLAVLHLVLTMRFSRVLCFTNSRENSHRLFLLVQAFG 552
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ + E+S R +TLK F +GKIQ+LVS+DA RG+DV+GV V+NYD P Y
Sbjct: 553 G--VSVAEFSSRHGPGQRKRTLKKFEQGKIQLLVSTDATARGIDVQGVELVLNYDAPQYA 610
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+TY+HR GRTARAG+ G+ FTLL + + +RF ++L A H IP L++ L P Y
Sbjct: 611 RTYVHRVGRTARAGRAGQAFTLLLRVQERRFLRMLAGAGVLELRRHEIPGELLQPLVPCY 670
Query: 516 K 516
+
Sbjct: 671 E 671
>gi|301775625|ref|XP_002923233.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Ailuropoda
melanoleuca]
Length = 517
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 278/541 (51%), Gaps = 91/541 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-- 60
K P LP W+ P V S+ ED P++ +P + P ++ L+ GISS FPVQ AV
Sbjct: 22 KVQPFLPSWLAEPSCVGKSVTEDLVPIEDIPEVHPDMQKKLRAHGISSYFPVQAAVIPAL 81
Query: 61 -ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
E+ G RDLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++
Sbjct: 82 LESTANGFLVARGGYRPRDLCVSAPTGSGKTLAFVIPVVQALLRRAVCQVRALVVLPTKE 141
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ VF + A L V
Sbjct: 142 LAQQVSK---------------------------------------VFNSYTDATPLRVA 162
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+ E L+++ + D++VATPGRL+DHI+ T GF
Sbjct: 163 LITGQKSLVKEQESLVQK-------------TADGFRCLADVVVATPGRLVDHIDQTPGF 209
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+HL +LV+DE DR++ +Q+WLP V++ SD + P A L+ +
Sbjct: 210 SLQHLRFLVIDEADRMIDSMHQSWLPRVVEAVFR------SDGAKDRPLAL--LQRRQPQ 261
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------------- 339
P L K++ SATLTQ+P KL QL L+ P +TG R
Sbjct: 262 ATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGLARRGPRDADEDRDSG 321
Query: 340 --YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
Y P L + + C + KPL ++ L+ + + FT+S E++HRL L+ FG
Sbjct: 322 GKYTFPTGLSHHYVPCSLRTKPLAVLHLILEKNFSRVLCFTNSRENSHRLFLLVQAFGG- 380
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ E+S S R LK F +GKIQ+L+S+DAM RG+DV+GV V+NYD P Y++T
Sbjct: 381 -VTAAEFSSRCGPSQRKVVLKQFEQGKIQLLISTDAMARGIDVQGVQRVINYDAPQYLRT 439
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
Y+HR GRTARAG+ G+ FTLL K + ++F ++L +A H IP+ L++ L P Y+
Sbjct: 440 YVHRVGRTARAGKTGQAFTLLLKVQERKFLRMLAEAGVPEMARHDIPNELLQPLLPRYEE 499
Query: 518 G 518
Sbjct: 500 A 500
>gi|73994975|ref|XP_543351.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Canis lupus
familiaris]
Length = 631
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 279/540 (51%), Gaps = 94/540 (17%)
Query: 7 KSMPVLP-WMRSPVDV--SLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-- 60
K+ P LP W+ P V S+ ED P++ +P + P ++ LQ GISS FPVQ AV
Sbjct: 137 KAQPFLPLWLAEPSSVGKSVTEDLVPIEDIPEVHPDMQKKLQAHGISSYFPVQAAVIPTL 196
Query: 61 -ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
E+I G DLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++
Sbjct: 197 LESIANGFLVARGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLCRAVCQVRALVVLPTKE 256
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 257 LAQQVS---------KVFNIYTD------------------------------ATPLRVA 277
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+ E L+++ + + D++VATPGRL+DHI+ T GF
Sbjct: 278 LITGQKSLVKEQESLVQK-------------TVDGFRCLADVVVATPGRLVDHIDQTPGF 324
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLT-RSDNENRFSDASTFLPSAFGSLKTIRR 291
+L+HL +L++DE DR++ +Q+WLP V++ SD N F L+ +
Sbjct: 325 SLQHLRFLIIDEADRMIDSMHQSWLPRVVEAAFPSDVAN----------DPFALLQRRQL 374
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------- 336
P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 375 QATTAASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGLAGRGPRDIDRDGES 434
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y P L + + C + KPL ++ L+ + + FT+S E++HRL L+ FG
Sbjct: 435 GGKYTFPTGLSHHYVPCSLRTKPLAILHLILERNFSRVLCFTNSRENSHRLFLLVQAFGG 494
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+ E+S R R LK F +GKIQ+L+S+DAM RG+DV+GV V+NYD P Y++
Sbjct: 495 --VAAAEFSSRCRPGQRKVVLKQFEQGKIQLLISTDAMARGIDVQGVQLVINYDAPQYLR 552
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H I S L++ L P Y+
Sbjct: 553 TYVHRVGRTARAGRTGQAFTLLLKVQERRFLQMLAEAGVPKMARHDIHSELLQPLVPRYE 612
>gi|281340804|gb|EFB16388.1| hypothetical protein PANDA_012336 [Ailuropoda melanoleuca]
Length = 490
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 277/538 (51%), Gaps = 91/538 (16%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ET 62
P LP W+ P V S+ ED P++ +P + P ++ L+ GISS FPVQ AV E+
Sbjct: 3 PFLPSWLAEPSCVGKSVTEDLVPIEDIPEVHPDMQKKLRAHGISSYFPVQAAVIPALLES 62
Query: 63 IGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
G RDLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++LA
Sbjct: 63 TANGFLVARGGYRPRDLCVSAPTGSGKTLAFVIPVVQALLRRAVCQVRALVVLPTKELAQ 122
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
QV+ VF + A L V L
Sbjct: 123 QVSK---------------------------------------VFNSYTDATPLRVALIT 143
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
GQ S+ E L+++ + D++VATPGRL+DHI+ T GF+L+
Sbjct: 144 GQKSLVKEQESLVQK-------------TADGFRCLADVVVATPGRLVDHIDQTPGFSLQ 190
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
HL +LV+DE DR++ +Q+WLP V++ SD + P A L+ +
Sbjct: 191 HLRFLVIDEADRMIDSMHQSWLPRVVEAVFR------SDGAKDRPLAL--LQRRQPQATT 242
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---------------Y 340
P L K++ SATLTQ+P KL QL L+ P +TG R Y
Sbjct: 243 AASISCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGLARRGPRDADEDRDSGGKY 302
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
P L + + C + KPL ++ L+ + + FT+S E++HRL L+ FG +
Sbjct: 303 TFPTGLSHHYVPCSLRTKPLAVLHLILEKNFSRVLCFTNSRENSHRLFLLVQAFGG--VT 360
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E+S S R LK F +GKIQ+L+S+DAM RG+DV+GV V+NYD P Y++TY+H
Sbjct: 361 AAEFSSRCGPSQRKVVLKQFEQGKIQLLISTDAMARGIDVQGVQRVINYDAPQYLRTYVH 420
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
R GRTARAG+ G+ FTLL K + ++F ++L +A H IP+ L++ L P Y+
Sbjct: 421 RVGRTARAGKTGQAFTLLLKVQERKFLRMLAEAGVPEMARHDIPNELLQPLLPRYEEA 478
>gi|297484677|ref|XP_002694482.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
gi|296478689|tpg|DAA20804.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Bos taurus]
Length = 555
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 278/541 (51%), Gaps = 94/541 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 59 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPEVHPDLQKKLRAQGISSYFPVQAAVIPAV 118
Query: 59 WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T L R DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 119 LESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKE 178
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 179 LAQQVS---------KVFNVYTD------------------------------ATPLRVA 199
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 200 LITGQKSLAKEQESLVQK-------------TADGFRCLADIMVATPGRLVDHIDQTPGF 246
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+HL +L++DE DR++ +Q+WLP V+ R + F + L C
Sbjct: 247 SLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR-DPCAVFQRTQPRVLTAASMC 305
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-------------- 338
P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 306 C--------PQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGSAHRGPSDPDIDVDED 357
Query: 339 ---RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+Y P L+ + + C + KPL ++ L+ + + + FT+S E++HRL L+ FG
Sbjct: 358 SGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRVLCFTNSRENSHRLFLLVQAFG 417
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ + E+S R LK F +GKIQ+L+S+DAM RG+DV+GV VVNYD P Y+
Sbjct: 418 G--VTVAEFSSRYGPGQRKSILKQFEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQYL 475
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+TY+HR GRTARAG+ G+ FTLL K + +RF ++L++ H PS L++ L P Y
Sbjct: 476 RTYVHRVGRTARAGKSGQAFTLLLKVQERRFLRMLEEGGVPGLERHDTPSELLQPLVPQY 535
Query: 516 K 516
+
Sbjct: 536 E 536
>gi|194674602|ref|XP_001787674.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
Length = 565
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 278/541 (51%), Gaps = 94/541 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 69 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPEVHPDLQKKLRAQGISSYFPVQAAVIPAV 128
Query: 59 WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T L R DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 129 LESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKE 188
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 189 LAQQVS---------KVFNVYTD------------------------------ATPLRVA 209
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 210 LITGQKSLAKEQESLVQK-------------TADGFRCLADIMVATPGRLVDHIDQTPGF 256
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+HL +L++DE DR++ +Q+WLP V+ R + F + L C
Sbjct: 257 SLQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR-DPCAVFQRTQPRVLTAASMC 315
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-------------- 338
P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 316 C--------PQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGSAHRGPSDPDIDVDED 367
Query: 339 ---RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+Y P L+ + + C + KPL ++ L+ + + + FT+S E++HRL L+ FG
Sbjct: 368 SGGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRVLCFTNSRENSHRLFLLVQAFG 427
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ + E+S R LK F +GKIQ+L+S+DAM RG+DV+GV VVNYD P Y+
Sbjct: 428 G--VTVAEFSSRYGPGQRKSILKQFEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQYL 485
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+TY+HR GRTARAG+ G+ FTLL K + +RF ++L++ H PS L++ L P Y
Sbjct: 486 RTYVHRVGRTARAGKSGQAFTLLLKVQERRFLRMLEEGGVPGLERHDTPSELLQPLVPQY 545
Query: 516 K 516
+
Sbjct: 546 E 546
>gi|355786666|gb|EHH66849.1| hypothetical protein EGM_03914, partial [Macaca fascicularis]
Length = 494
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 277/537 (51%), Gaps = 91/537 (16%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET--- 62
P LP W+ P V ++ +D P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 4 PFLPRWLAEPSCVRKNVNKDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPALLES 63
Query: 63 ------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++LA
Sbjct: 64 AACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKELAQ 123
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
QVN +F + D A L V L
Sbjct: 124 QVN---------KVFNIYTD------------------------------ATPLRVSLIT 144
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF L+
Sbjct: 145 GQKSLAKEQESLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGFNLQ 191
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +LV+DE DR++ +Q+WLP V+ F P A + ++ V
Sbjct: 192 QLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPTDPCALLQRRQVQ--AVT 242
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--------------YK 341
P L K++ SATLTQ+P KL QL LH P +TG R Y
Sbjct: 243 AASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLARRGLEDTDGDGDLGKYA 302
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
P L + + C KPL ++ L+ +G K + FT+S E++HRL L+ FG + +
Sbjct: 303 FPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSKVLCFTNSRENSHRLFLLVQAFGG--VDV 360
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E+S R + LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+HR
Sbjct: 361 AEFSSRYGPGQRRRILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHR 420
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
AGRTARAG++G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 421 AGRTARAGKMGQAFTLLLKVQERRFLQMLTEAGAPELRRHELSSKLLQPLVPQYEEA 477
>gi|291412934|ref|XP_002722733.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Oryctolagus
cuniculus]
Length = 507
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 279/540 (51%), Gaps = 98/540 (18%)
Query: 10 PVLP-WMRSPV----DVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET-- 62
P LP W+ P DVS PL+ +P + P L+ L+ GIS+ FPVQ AV
Sbjct: 16 PFLPGWLAEPSCVRKDVS-GNLTPLEDVPEVHPDLQRQLRAQGISAYFPVQAAVIPVVLE 74
Query: 63 -------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
+G G ++ RDLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++LA
Sbjct: 75 SAASGFLVGRGGYQPRDLCVSAPTGSGKTLAFVIPVVQALLHRVVCQIRALVVLPTKELA 134
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
QV+ +F + D A L V L
Sbjct: 135 QQVS---------KVFNIYTD------------------------------ATPLRVALV 155
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
GQ S+A E L++R + DI+VATPGRL+DHI+ T GF L
Sbjct: 156 TGQRSLAKEQEGLVQR-------------TADGYRCLADIVVATPGRLVDHIDQTPGFHL 202
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQ--LTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+ L +LV+DE DR++ +Q+WLP V+ R + S P A + T R
Sbjct: 203 QQLRFLVIDEADRMVDSMHQSWLPRVVAAAFQREGPGDLCSVLQRSQPPAVTAASTCR-- 260
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-------------- 338
P L K++ SATLTQDP +L +L LH P ++G+
Sbjct: 261 ---------PQVPLQKLLFSATLTQDPERLQRLGLHQPRLFSSGQAHGGSRDGEERGGLA 311
Query: 339 -RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+Y P L + + C + KPL ++ L+ L + + FT+S E++HRL L+ FG
Sbjct: 312 GKYDFPAGLTHHYVPCRLRSKPLVVLHLILELKFSRVLCFTNSRENSHRLFLLVQAFGG- 370
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ + E+S R LK F++GKIQ+LVS+DA RG+DV+GV VVNYD P Y++T
Sbjct: 371 -VSVAEFSSRCGPGQRRGILKRFQQGKIQLLVSTDAAARGIDVQGVELVVNYDAPQYLRT 429
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
Y+HR GRTARAG+ G+ FTLL K + +RF ++L++A H PS L++ L P Y++
Sbjct: 430 YVHRVGRTARAGRTGQAFTLLLKVQERRFLQMLEEAGAPRLQRHETPSELLQPLVPRYEA 489
>gi|25455599|gb|AAH40185.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sapiens]
Length = 666
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 276/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVKPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRLSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 293 LARQVS---------KVFNIYTD------------------------------ATPLRVS 313
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 314 LVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 360
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ F P A LK +
Sbjct: 361 SLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LKRRQAQ 411
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 412 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSG 471
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 472 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 529
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 530 VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 589
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 590 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 647
>gi|297693495|ref|XP_002824053.1| PREDICTED: ATP-dependent RNA helicase DDX51 isoform 1 [Pongo
abelii]
Length = 672
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 279/541 (51%), Gaps = 91/541 (16%)
Query: 4 AKKKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
++ P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 176 GREGGRPFLPRWLTEPSCVRKNVTEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVI 235
Query: 60 QET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLP
Sbjct: 236 PALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLP 295
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
T++LA QV+ +F + D A L
Sbjct: 296 TKELAQQVS---------KVFNIYTD------------------------------ATPL 316
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
V L GQ S+A E L+++ + DI+VATPGRL+DHI+ T
Sbjct: 317 RVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQT 363
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ + F ++
Sbjct: 364 PGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCALFQRRQAQAVTAA 422
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET----------- 338
C P L K++ SATLTQ+P KL QL LH P +TG T
Sbjct: 423 STCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLTHRGLEDTDGDG 474
Query: 339 ---RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 475 DSEKYAFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFG 534
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y+
Sbjct: 535 G--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYL 592
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y
Sbjct: 593 RTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRY 652
Query: 516 K 516
+
Sbjct: 653 E 653
>gi|402888183|ref|XP_003907453.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Papio anubis]
Length = 656
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 278/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 163 KVQPFLPRWLAEPSCVRKNVNEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 222
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 223 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 282
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 283 LAQQVS---------KVFNIYTD------------------------------ATPLRVS 303
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 304 LITGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 350
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L+ L +LV+DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 351 NLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LQRRQAQ 401
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 402 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLENTDGDGDSG 461
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 462 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 519
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R + LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 520 VDVAEFSSRYGPGQRRRILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 579
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HRAGRTARAG+ G+ FTLL + + +RF ++L +A H + S L+++L P Y+
Sbjct: 580 VHRAGRTARAGKTGQAFTLLLRVQERRFLQMLTEAGVPELRRHELSSKLLQALVPRYE 637
>gi|426247154|ref|XP_004017351.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51
[Ovis aries]
Length = 676
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 276/541 (51%), Gaps = 94/541 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 180 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPAVHPDLQKKLRAQGISSYFPVQAAVIPAL 239
Query: 59 WQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T L R DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++
Sbjct: 240 LESTANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKE 299
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 300 LAQQVS---------KVFNVYTD------------------------------ATPLRVA 320
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DH++ T GF
Sbjct: 321 LITGQKSLAKEQESLVQK-------------TADGFRCLADIMVATPGRLVDHVDQTPGF 367
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+HL +L++DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 368 SLQHLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FPSEGPKDPCAL--LQRTQPR 418
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-------------- 338
V P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 419 VVTAASMCCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGSAYRAPSNPGIDVDGD 478
Query: 339 ---RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+Y P L + + C + KPL ++ L+ + + + FT+S E++HRL L+ FG
Sbjct: 479 SGGKYTFPVGLTHHYVPCSLRFKPLVILHLILEMNFSRVLCFTNSRENSHRLFLLVQAFG 538
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y+
Sbjct: 539 G--VTVAEFSSRYGPGQRKSILKQFEQGKIQLLISTDATARGIDVQGVQLVVNYDAPQYL 596
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+TY+HR GRTARAG+ G+ FTLL K + +RF +L++ H PS L++ L P Y
Sbjct: 597 RTYVHRVGRTARAGKSGQAFTLLLKVQERRFLHMLEEGGVPGMERHDTPSELLQPLVPRY 656
Query: 516 K 516
+
Sbjct: 657 E 657
>gi|297693497|ref|XP_002824054.1| PREDICTED: ATP-dependent RNA helicase DDX51 isoform 2 [Pongo
abelii]
Length = 665
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 280/542 (51%), Gaps = 91/542 (16%)
Query: 3 EAKKKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
+A K S LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 168 KAPKVSPAFLPRWLTEPSCVRKNVTEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAV 227
Query: 59 WQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVL
Sbjct: 228 IPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVL 287
Query: 109 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 168
PT++LA QV+ +F + D A
Sbjct: 288 PTKELAQQVS---------KVFNIYTD------------------------------ATP 308
Query: 169 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 228
L V L GQ S+A E L+++ + DI+VATPGRL+DHI+
Sbjct: 309 LRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQ 355
Query: 229 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 288
T GF+L+ L +LV+DE DR++ +Q+WLP V+ +E+ + F ++
Sbjct: 356 TPGFSLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCALFQRRQAQAVTA 414
Query: 289 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET---------- 338
C P L K++ SATLTQ+P KL QL LH P +TG T
Sbjct: 415 ASTCC--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLTHRGLEDTDGD 466
Query: 339 ----RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ F
Sbjct: 467 GDSEKYAFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAF 526
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y
Sbjct: 527 GG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQY 584
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P
Sbjct: 585 LRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPR 644
Query: 515 YK 516
Y+
Sbjct: 645 YE 646
>gi|154759257|ref|NP_778236.2| ATP-dependent RNA helicase DDX51 [Homo sapiens]
gi|229462978|sp|Q8N8A6.3|DDX51_HUMAN RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
Length = 666
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 276/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 293 LAQQVS---------KVFNIYTD------------------------------ATPLRVS 313
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 314 LVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 360
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 361 SLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LQRRQAQ 411
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 412 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSG 471
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 472 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 529
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 530 VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 589
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 590 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 647
>gi|355683374|gb|AER97086.1| DEAD box polypeptide 51 [Mustela putorius furo]
Length = 474
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 186/519 (35%), Positives = 264/519 (50%), Gaps = 88/519 (16%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ETIGPGLF-------ERDLCI 74
+ P++H+P + P ++ L+ GISS FPVQ AV E+ G RDLC+
Sbjct: 4 DSVPIEHIPAVHPDMQKKLRAHGISSYFPVQAAVIPALLESTADGFLVARGGYRPRDLCV 63
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIA 134
++PTGSGKTL++ +P+VQ L RA+ +RALVVLPT++LA QV CK +F +
Sbjct: 64 SAPTGSGKTLAFVIPVVQALLGRAICQVRALVVLPTKELAQQV--------CK-VFNIYT 114
Query: 135 DHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 194
D A L V L GQ S+ E L+++
Sbjct: 115 D------------------------------ATPLRVALITGQKSLVKEQESLVQK---- 140
Query: 195 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 254
+ D++VATPGRL+DHI+ T GF+L HL +LV+DE DR++ +Q
Sbjct: 141 ---------TADGFRCLADVVVATPGRLVDHIDQTPGFSLLHLRFLVIDEADRMIDSMHQ 191
Query: 255 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
+WLP V+ E F P F L+ + P L K++ SAT
Sbjct: 192 SWLPRVV-------EAAFPSDGAKDP--FVLLQRRQPQAPTAASISCPQMPLQKLLFSAT 242
Query: 315 LTQDPNKLAQLDLHHPLFLTTGETR---------------YKLPERLESYKLICESKLKP 359
LTQ+P KL QL LH P +TG R Y P L + + C + KP
Sbjct: 243 LTQNPEKLQQLGLHQPWLFSTGLARRDPGDSDADRDSGGKYAFPAGLSHHYVPCSLRTKP 302
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
L ++ L+ + + FT+S E++HRL L+ FG + E+S R LK
Sbjct: 303 LAILHLILEKNFSRVLCFTNSRENSHRLFLLVQAFGG--VTAAEFSSRCGPGQRKAVLKQ 360
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL
Sbjct: 361 FEQGKIQLLISTDATARGIDVQGVQLVVNYDAPQYLRTYVHRVGRTARAGRTGQAFTLLL 420
Query: 480 KDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
K + +RF ++L +A IPS L++ L P Y+
Sbjct: 421 KVQERRFLRMLAEAGVPDMTRQDIPSELLQPLVPRYEEA 459
>gi|345314845|ref|XP_001512662.2| PREDICTED: ATP-dependent RNA helicase DDX51, partial
[Ornithorhynchus anatinus]
Length = 652
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 278/538 (51%), Gaps = 85/538 (15%)
Query: 2 EEAKKKSMPVLP-WMRSPVDV--SLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVA 57
++A +K P LP W+ P V S+ ED P+ +P + P ++ L+ GISS FPVQ A
Sbjct: 168 KKALQKVQPFLPQWLAEPSRVRKSVTEDLVPIRDIPGIHPDVQKKLEANGISSYFPVQAA 227
Query: 58 VWQET---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
V +G G + RD+C+++PTGSGKTLS+ +P+VQ LS RAV +RALVV
Sbjct: 228 VIPVVLESATHGFLVGRGGYRPRDICVSAPTGSGKTLSFVIPVVQVLSERAVCHVRALVV 287
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
LPT++LA QV+ VF
Sbjct: 288 LPTKELAQQVSK---------------------------------------VFHTYTEQT 308
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
L V L GQ +A E L++ E Y +S DI+VATPGRL+DHI+
Sbjct: 309 ALRVALITGQKPLAKEQELLVQ----ETDTGY---------RSLADIVVATPGRLVDHID 355
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T GF+L L +LV+DE DR++ Q+WLP V+ +A G +
Sbjct: 356 QTPGFSLRQLRFLVIDEADRMIDSMQQSWLPRVMAAV-FGGTGSGGPGELLQRTAPGVIT 414
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG-------ETR 339
C +P L K++ SATLT++P KL QL L+ P LF TTG + +
Sbjct: 415 AASSC--------RPQMPLQKLLFSATLTRNPEKLQQLGLYQPRLFSTTGTREGPAGDGK 466
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
Y P L Y + C KP+ ++ LL + + FT+S E++HRL L+ FG +
Sbjct: 467 YTFPAGLSHYYVPCSLSSKPMLVLHLLHQEDFPRVLCFTNSRENSHRLFLLIQAFGG--V 524
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
K+ E+S R LK F +GKIQ+L+S+DA RG+DVEGV V+NYD P YI++Y+
Sbjct: 525 KVAEFSSRFGPGQRKLILKQFEQGKIQLLISTDATARGIDVEGVKLVINYDAPHYIRSYV 584
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
HR GRTARAG+ G +T L K + ++F ++L++A + + I L+E L P Y++
Sbjct: 585 HRVGRTARAGRTGLAYTFLLKVQEQKFLRMLREAGAPALQPYPIRRELLEPLVPQYQA 642
>gi|403292279|ref|XP_003945289.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Saimiri boliviensis boliviensis]
Length = 553
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 278/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 60 KVQPFLPKWLAEPSCVRKNVTEDLVPIEDIPEVHPELQKQLRAHGISSYFPVQAAVIPAL 119
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 120 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHVRALVVLPTKE 179
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 180 LAQQVS---------KVFNIYTD------------------------------ATPLRVS 200
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 201 LITGQKSLAKEQDSLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 247
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 248 SLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPAEPCAL--LQRRQAQ 298
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------ET------- 338
V P L K++ SATLTQ+P KL QL LH P +TG ET
Sbjct: 299 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGPEETDGDRESG 358
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 359 KYAFPAGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 416
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 417 VDVAEFSSRYGPGQRKAILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 476
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL + + +RF ++L ++ H + S L++ L P Y+
Sbjct: 477 VHRVGRTARAGKTGQAFTLLLRVQERRFLRMLAESGAPELQRHELSSKLLQPLVPKYE 534
>gi|348550777|ref|XP_003461207.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX51-like [Cavia porcellus]
Length = 677
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 279/539 (51%), Gaps = 92/539 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ +P V ++ +D P++ +P + P L+ L+ GIS+ FPVQ AV
Sbjct: 183 KVQPFLPAWLANPSCVKKNVTKDLVPIEDIPEVHPDLQKQLRAHGISAYFPVQAAVIPAV 242
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 243 LESSASGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 302
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 303 LAQQVS---------RVFNVYTD------------------------------ATPLRVA 323
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ +A E L+++ + DI+VATPGRL+DHI+ T+GF
Sbjct: 324 LVTGQKPLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTQGF 370
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L+VDE DR++ +Q+WLP V+ F P+ L+ R
Sbjct: 371 SLQQLRFLIVDEADRMIDSMHQSWLPRVMAAA-------FPCEGPTDPATL--LQRRRAP 421
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GE 337
V P L K++ SATLTQ+P KL +L L+ P +T E
Sbjct: 422 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQRLGLYLPRLFSTRLAHRALEDDTAGGDPE 481
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+Y P L + + C KPL ++ L+ + + + FT+S E++HRL L+ FG
Sbjct: 482 GKYAFPSGLTHHYVPCSLNAKPLAIIHLVLGMSISRTLCFTNSRENSHRLFLLVQAFGG- 540
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ + E+S R K LK F +GKIQ+L+S+DA RG+DV GV V+NYD P Y++T
Sbjct: 541 -VSVAEFSACYGPGHRRKILKQFEQGKIQLLISTDATARGIDVPGVELVINYDAPQYLRT 599
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
Y+HR GRTARAG++GR FTLL K + +RF ++L +A H +PS L++ L P Y+
Sbjct: 600 YVHRVGRTARAGRMGRAFTLLLKVQERRFLRMLAEAGAPELVRHEVPSKLLQPLVPRYE 658
>gi|410976432|ref|XP_003994624.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Felis catus]
Length = 538
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 278/558 (49%), Gaps = 105/558 (18%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV----WQE 61
P LP W+ P V S+ ED P++ +P + P ++ L+ GISS FPVQ AV +
Sbjct: 16 PFLPSWLAEPSCVGKSVTEDSVPIEDIPAVHPDMQKQLRAHGISSYFPVQAAVIPALLES 75
Query: 62 TIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
T L R DLC+++PTGSGKTL++ +P+VQ L RAV +RALVVLPT++LA
Sbjct: 76 TANGFLVARGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLCRAVCQVRALVVLPTKELAQ 135
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
QV+ +F + D A L V L
Sbjct: 136 QVS---------KVFNVYTD------------------------------ATPLRVALIT 156
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
GQ S+ E L++R + D++VATPGRL+DHI+ T GF+L
Sbjct: 157 GQKSLVKEQETLVQR-------------TADGFRCLADVVVATPGRLVDHIDQTPGFSLR 203
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR-------------FSDASTFLPSA 282
HL +LV+DE DR++ +Q+WLP V++ + + + A LP
Sbjct: 204 HLRFLVIDEADRMIDSMHQSWLPRVVEAAFPSDSAKDPCALLQRRQLRATTAARPALPWR 263
Query: 283 FGSLKTIRRCGVERGFKDK---------PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
+ + C ++G + P L K++ SATLTQ+P KL QL LH P
Sbjct: 264 VPGGQVQQVCRPDQGRRPTARSPSSTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLF 323
Query: 334 TTGETR---------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFT 378
+TG R Y P L + C + KPL ++ L+ + + + FT
Sbjct: 324 STGLARGGPKDADADGDSGGKYTFPAGLSHCYVPCSLRTKPLVILHLILEMNFSRVLCFT 383
Query: 379 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 438
+S E++HRL L+ FG + E+S R LK F +GKI++L+S+DA RG+
Sbjct: 384 NSRENSHRLFLLVQAFGG--VTAAEFSSRCGPGQRKAVLKQFEQGKIRLLISTDATARGI 441
Query: 439 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSC 498
D++GV VVNYD P Y++TY+HR GRTARAG+ GR FTLL K + +RF ++L +A
Sbjct: 442 DMQGVQLVVNYDAPQYLRTYVHRVGRTARAGRTGRAFTLLLKVQERRFLRMLAEAGAPEL 501
Query: 499 PIHSIPSSLIESLRPVYK 516
H IP L+ L P Y+
Sbjct: 502 ARHDIPGELLRPLVPRYE 519
>gi|397487104|ref|XP_003814650.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Pan paniscus]
Length = 529
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 189/538 (35%), Positives = 276/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GIS FPVQ AV
Sbjct: 36 KVQPFLPRWLAEPNCVRKNVTEDLVPIEDIPDVHPDLQKQLRAHGISFYFPVQAAVIPAL 95
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 96 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 155
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 156 LAQQVS---------KVFNIYTD------------------------------ATSLRVS 176
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 177 LVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 223
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +LV+DE DR++ +Q+WLP V+ +E+ + F ++ C
Sbjct: 224 SLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCALFQRRQAQAVTAASTC 282
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 283 C--------PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSG 334
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 335 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 392
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 393 VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 452
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 453 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 510
>gi|296213300|ref|XP_002753212.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Callithrix jacchus]
Length = 797
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 277/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 174 KVQPFLPKWLAEPSCVRKNVTEDLVPIEDIPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 233
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 234 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHVRALVVLPTKE 293
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 294 LAQQVS---------RVFNIYTD------------------------------ATPLRVS 314
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 315 LVTGQKSVAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 361
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 362 SLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LQRRQAQ 412
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------ET------- 338
V P L K++ SATLTQ+P KL QL LH P +TG ET
Sbjct: 413 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGPEETGGDRESG 472
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 473 KYAFPVGLTHHYVPCSLSSKPLVILHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 530
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 531 VDVAEFSSRYGPGQRRAILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 590
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A + H +P L+ L Y+
Sbjct: 591 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLAEAGAPALQRHELPGKLLRPLVSRYE 648
>gi|449281559|gb|EMC88606.1| ATP-dependent RNA helicase DDX51, partial [Columba livia]
Length = 489
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 282/538 (52%), Gaps = 99/538 (18%)
Query: 10 PVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----AVWQE 61
P LP W+ P V + ++ P+ +P + PRL LQ GI S FPVQ A+ Q
Sbjct: 6 PFLPQWLAQPKLVQKRIKDNLVPVGDIPGIHPRLLKKLQMNGIQSFFPVQAEVIPAILQS 65
Query: 62 T-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
+G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT++LA
Sbjct: 66 ASNGYLMGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCQVRALVVLPTKELAQ 125
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
QV+ +F + D GL V L
Sbjct: 126 QVS---------KVFNIYTD------------------------------GTGLKVVLIT 146
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
GQ S A E L++ K G C S DI+VATPGRL DHIN T GF+L
Sbjct: 147 GQKSFAKEQEMLVQ--KKVTGYC-----------SLADIIVATPGRLTDHINQTPGFSLT 193
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +LVVDE DR++ + +Q L +++ EN + F + G + C
Sbjct: 194 QLRFLVVDEADRMIDDMHQNCLNQIVKAA-FQVENGSGSNTLFWRTKPGPITAASSC--- 249
Query: 296 RGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLHHPLFLTT--------GE-------T 338
YP+ L K++ SATLTQDP KL QL+L P T+ GE T
Sbjct: 250 -------YPQIPLQKLLFSATLTQDPEKLQQLNLFQPRLFTSVYSEKKSLGEGTETEQDT 302
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y LPE L + C+ KPL L+ + ++ + + FT+S E++HRL L+ FG R
Sbjct: 303 KYTLPEGLSQCYVPCDLNSKPLLLLHFMLTMKFSRVLCFTNSREASHRLFLLVQAFG--R 360
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S + R +T+K F +GKIQ+L+S+DA RG+D++GVN V+NYD P +I+TY
Sbjct: 361 VTVAEFSSRLSPNERQRTMKEFEQGKIQLLISTDATARGIDIKGVNYVINYDAPQFIRTY 420
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
IHR GRTARAG++G F+L+ + + +RF ++L+ A H + + SL+P+ +
Sbjct: 421 IHRVGRTARAGEVGVAFSLVLRIQERRFLRMLKDAGIRDVKKHPVKGN---SLKPLVQ 475
>gi|21756727|dbj|BAC04942.1| unnamed protein product [Homo sapiens]
gi|326205429|dbj|BAJ84089.1| ATP-dependent RNA helicase DDX51 [Homo sapiens]
Length = 666
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 190/538 (35%), Positives = 275/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 293 LAQQVS---------KVFNIYTD------------------------------ATPLRVS 313
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+ E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 314 LVTGQKSLVKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 360
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 361 SLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LQRRQAQ 411
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 412 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSG 471
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 472 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 529
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 530 VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 589
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 590 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 647
>gi|410047553|ref|XP_003954509.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Pan troglodytes]
Length = 497
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 273/532 (51%), Gaps = 90/532 (16%)
Query: 14 WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET-------- 62
W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 12 WLAEPXCVRKNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPALLESAACGF 71
Query: 63 -IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++LA QV+
Sbjct: 72 LVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKELAQQVS-- 129
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+F + D A L V L GQ S+
Sbjct: 130 -------KVFNIYTD------------------------------ATPLRVSLVTGQKSL 152
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
A E L+++ + DI+VATPGRL+DHI+ T GF+L+ L +L
Sbjct: 153 AKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFL 199
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR++ +Q+WLP V+ +E+ + F ++ C
Sbjct: 200 VIDEADRMIDSMHQSWLPRVVAAA-FQSEDPADPCALFQRRQAQAVTAASTCC------- 251
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ETRYKLPERL 346
P L K++ SATLTQ+P KL QL LH P +TG +Y P L
Sbjct: 252 -PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGL 310
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ + C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S
Sbjct: 311 THHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSS 368
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+HR GRTA
Sbjct: 369 RYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTA 428
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
RAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 429 RAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYEEA 480
>gi|441630929|ref|XP_004093170.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51,
partial [Nomascus leucogenys]
Length = 684
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 189/538 (35%), Positives = 276/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 83 KVQPFLPRWLAEPSCVRKNVTEDLVPIEDVPEVHPDLQKQLRAHGISSYFPVQAAVIPAL 142
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 143 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 202
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 203 LAQQVS---------KVFNIYTD------------------------------ATPLRVS 223
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 224 LVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 270
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +LV+DE DR++ +Q+WLP V+ +E+ + F ++ C
Sbjct: 271 SLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FQSEDSADPCALFQRRQAQAVTAASTC 329
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 330 --------CPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSG 381
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 382 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 439
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 440 VDVAEFSSRYGPXQRRMILKQXEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 499
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 500 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 557
>gi|326929902|ref|XP_003211092.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Meleagris
gallopavo]
Length = 582
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 281/547 (51%), Gaps = 100/547 (18%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K P LP W+ P V + E+ P+ +P + P+L LQ GI S FPVQ A
Sbjct: 85 QKVQPFLPHWLAQPKLVQKRIKENLTPIKDVPGIHPKLLKKLQMNGIESFFPVQAEVIPA 144
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
V Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT+
Sbjct: 145 VLQSASNGYLMGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCQVRALVVLPTK 204
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV +F + D GL V
Sbjct: 205 ELAQQVG---------KVFNIYTD------------------------------GTGLKV 225
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
L GQ S A E L++ K G C S DI+VATPGRL DHI+ T G
Sbjct: 226 VLITGQKSFAKEQEMLVQ--KKVTGYC-----------SLADIIVATPGRLADHISKTPG 272
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT-RSDNENRFSDASTFLPSAFGSLKTIR 290
F+L L +L++DE DR++ + +Q WL V++ +++NE+ + F + G +
Sbjct: 273 FSLTQLRFLIIDEADRMIDDMHQNWLNQVVKAAFQAENED--GSNTLFQRTKPGPVTAAG 330
Query: 291 RCGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLHHPLFLTT------------- 335
C YP+ L K++ SATLTQDP KL QL L P T+
Sbjct: 331 CC----------YPQIPLQKLLFSATLTQDPEKLQQLGLFQPCLFTSVYSEKKPLRDGTE 380
Query: 336 ----GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
E +Y LPE L + C+ KPL L+ + + + + FT+S E++HRL L+
Sbjct: 381 TEQDSEEKYTLPEELSQSYVPCDLNSKPLLLLHFMLTKKFTRVLCFTNSREASHRLFLLV 440
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
FG I + E+S + R +TLK F +GKIQ+L+S+DA RG+D++GVN V+NYD
Sbjct: 441 QAFG--GITVAEFSSRLPPNERKRTLKEFEQGKIQLLISTDATARGIDIKGVNCVINYDT 498
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 511
P +I+TYIHR GRTARAG+ G F+++ + + +RF ++L+ A H + L++ L
Sbjct: 499 PQFIRTYIHRVGRTARAGKAGLAFSMVLRIQERRFLRMLKDAGIPDIKQHLVKGKLLKPL 558
Query: 512 RPVYKSG 518
Y+
Sbjct: 559 VQQYEEA 565
>gi|395513523|ref|XP_003760973.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Sarcophilus harrisii]
Length = 668
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 278/543 (51%), Gaps = 99/543 (18%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ D P+ +P + P L+ L+ GI S FPVQ AV
Sbjct: 175 KVQPFLPKWLAEPSRVQKSVKNDLVPIQDIPGIHPCLQKKLKTNGILSYFPVQAAVIPAL 234
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ D+C+++PTGSGKTLS+ +P++Q L R V +RALVVLPT++
Sbjct: 235 LESASHGFLVGKGGYQPSDICVSAPTGSGKTLSFVIPVIQVLLERVVCHIRALVVLPTKE 294
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + AD GL V
Sbjct: 295 LAQQVS---------KVFNVYAD------------------------------GTGLRVA 315
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
GQ S+A E L++ K ++G S DI+VATPGRL+DHI+ T GF
Sbjct: 316 QITGQKSLAKEQEILVQ--KTDSG-----------YHSLADIVVATPGRLVDHIDQTPGF 362
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L L +L++DE DR++ +Q+WLP V++ ++ A GS RR
Sbjct: 363 SLRQLRFLIIDEADRMIDSMHQSWLPRVVKAVFHGDD------------APGSSPLFRRV 410
Query: 293 ---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG------------- 336
+ +P L K++ SATLT++P KL +L L+ P +TG
Sbjct: 411 EPRAITAASTSQPQMPLQKLLFSATLTRNPEKLQELGLYQPRLFSTGLESQESTVQPGIE 470
Query: 337 ---ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
E +Y P L + + C KPL ++ L+++L + + FT+S E +HRL L+
Sbjct: 471 QDVEGKYAFPAGLSHFYVPCSLNSKPLVILHLMRNLKFSRVLCFTNSREHSHRLFLLVKA 530
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
FG I + E+S R LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P
Sbjct: 531 FGG--IPVAEFSSRFGPGQRKMILKQFEQGKIQLLISTDATARGIDVKGVKLVINYDAPQ 588
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRP 513
YI+TY+HR GRTARAG G FTLL K + ++F ++L++A H + + ++SL P
Sbjct: 589 YIRTYVHRVGRTARAGHTGLAFTLLLKVQEQKFLQMLREARAPELGKHLVRNEHLKSLVP 648
Query: 514 VYK 516
Y+
Sbjct: 649 QYE 651
>gi|426374738|ref|XP_004054220.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Gorilla gorilla
gorilla]
Length = 641
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 190/538 (35%), Positives = 275/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
+ P LP W+ P V ++ ED P++ + + P L+ L+ GISS FPVQ AV
Sbjct: 148 RVQPFLPRWLAEPNCVRKNVTEDLVPVEDIRDVHPDLQKQLRAHGISSYFPVQAAVIPAL 207
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 208 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 267
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 268 LAQQVS---------KVFNIYTD------------------------------ATPLRVS 288
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 289 LVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 335
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +LV+DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 336 SLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LQRRQAQ 386
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 387 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDRDSG 446
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 447 KYTFPVGLTHHYVPCSLNSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 504
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 505 VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 564
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 565 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 622
>gi|449543170|gb|EMD34147.1| hypothetical protein CERSUDRAFT_125827 [Ceriporiopsis subvermispora
B]
Length = 699
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 275/560 (49%), Gaps = 112/560 (20%)
Query: 18 PVDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE------- 69
P +S F+ P D L +++ L+++G+S LF VQ AV +
Sbjct: 180 PTQLSPFDTTPDSDSGTGLSEKMRKRLKDLGVSELFAVQTAVIPFLLASSRLRSLYLPYD 239
Query: 70 --RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCK 127
RDLC+++PTGSGKTL+Y LPI +TL++R V LRALVVLPTRDL VN
Sbjct: 240 PPRDLCVSAPTGSGKTLAYVLPITETLTSRIVTRLRALVVLPTRDL---VN--------- 287
Query: 128 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 187
QV++ F A+A GL +G A GQ S A E ++L
Sbjct: 288 ---------------------------QVRETFEAVAKGRGLKIGTATGQHSFAHEQAQL 320
Query: 188 I---KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
+ RP +Q S VDIL+ TPGRL+DH+N T F+L+HL YLV+DE
Sbjct: 321 VAERSRP-------------VQGGSSKVDILICTPGRLIDHLNGTPNFSLQHLRYLVIDE 367
Query: 245 TDRLLREAYQAWLPTVLQLTR-----------SDNENRFSDAST--------FLPSAFGS 285
DRLL +++Q WL VL T S +E R S S+ L AF
Sbjct: 368 ADRLLAQSFQDWLAQVLSATNAPQRLDDAETSSISEGRLSSTSSPTAIPYPDALSPAFLH 427
Query: 286 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET------ 338
L R +K K++ SATLT+DP+K+A L+LH P F+ T
Sbjct: 428 L-LDRMPASTTDVDEKTEASCQKLLFSATLTRDPSKIAALNLHSPKYFVVQSRTDRSDSK 486
Query: 339 ----------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 388
++ +P L ++CE+ KPL L L+ + +VFT S EST RL
Sbjct: 487 EDGVLNIVMEKFSMPSTLSENMIVCETSEKPLMLFHLVHAHSVTNALVFTKSAESTARLV 546
Query: 389 TLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
L F G RI +K YS S R L+ F+ KI +LV SD ++RG+D
Sbjct: 547 RLFEFFEAAQSSTAQGSARIVVKAYSSDLSPSERKSILEQFKNQKIHILVCSDLISRGID 606
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN-DSC 498
+ V++VV+YD P ++ Y+HR GRTARAG+ G +TL+ + E + FK +L++AD+ D
Sbjct: 607 ISHVSHVVSYDAPVDMRKYVHRVGRTARAGRFGSAWTLVEEQEARYFKSMLKEADHLDKV 666
Query: 499 PIHSIPSSLIESLRPVYKSG 518
+ LRP Y++
Sbjct: 667 KRLRVSEKETTPLRPAYENA 686
>gi|354479142|ref|XP_003501772.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Cricetulus
griseus]
Length = 552
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 278/539 (51%), Gaps = 92/539 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV---- 58
K P LP W+ P V S+ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 58 KVQPFLPTWLAEPSCVKKSVTEDLTPIEDIPGVHPDLQKQLRANGISSYFPVQAAVIPAL 117
Query: 59 WQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+ T +G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 118 LESTDSGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 177
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 178 LAQQVS---------KVFNIYTD------------------------------ATPLRVA 198
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + + DILVATPGRL+DHI+ T GF
Sbjct: 199 LVTGQKSLAKEQESLVQK-------------TVDGYRCLADILVATPGRLVDHIDQTPGF 245
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +LV+DE DR++ +Q+WLP V+ +E + + ++ T C
Sbjct: 246 SLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FHSEGPSGSCALLQRTQPQAVTTASTC 304
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GE 337
F P L K++ SATLTQ+P KL +L L+ P +T
Sbjct: 305 -----FPQMP---LQKLLFSATLTQNPEKLQRLGLYQPRLFSTRLGHKGPKDTVEVDENL 356
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+Y P L + + C KPL ++ L+ + + + FT+S E +HRL L FG
Sbjct: 357 GKYTFPVGLTHHYVPCRLSSKPLIVLHLVLGMNFSRALCFTNSREHSHRLFLLAQAFGG- 415
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ + E+S R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y++T
Sbjct: 416 -VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRT 474
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
Y+HR GRTARAG+ G+ FTLL K + ++F +++ +A H IP L++ L Y+
Sbjct: 475 YVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELACHEIPRELLQPLVSRYE 533
>gi|440909766|gb|ELR59643.1| ATP-dependent RNA helicase DDX51, partial [Bos grunniens mutus]
Length = 542
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 273/540 (50%), Gaps = 96/540 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--WQ 60
K P LP W+ P V ++ E P++ +P + P L+ L+ GISS FP A+ W
Sbjct: 50 KVQPFLPVWLAQPSCVGKNVTEGLVPIEDIPEVHPDLQKKLRAQGISSYFPGAPALGRWT 109
Query: 61 ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
G DLC+++PTGSGKTL++ +P+VQ L +RAV +RALVVLPT++L
Sbjct: 110 GDGANGFLVSRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLHRAVCQVRALVVLPTKEL 169
Query: 114 ALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGL 173
A QV+ +F + D A L V L
Sbjct: 170 AQQVS---------KVFNVYTD------------------------------ATPLRVAL 190
Query: 174 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 233
GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF+
Sbjct: 191 ITGQKSLAKEQESLVQK-------------TADGFRCLADIMVATPGRLVDHIDQTPGFS 237
Query: 234 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 293
L+HL +L++DE DR++ +Q+WLP V+ R + F + L C
Sbjct: 238 LQHLRFLIIDEADRMIDSMHQSWLPRVVAAAFPSEGPR-DPCAVFQRTQPRVLTAASMC- 295
Query: 294 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET--------------- 338
P L K++ SATLTQ+P KL QL L+ P +TG
Sbjct: 296 -------CPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTGSAHRGPSDPDIDVDEDS 348
Query: 339 --RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y P L+ + + C + KPL ++ L+ + + + FT+S E++HRL + FG
Sbjct: 349 GGKYTFPTGLKHHYVPCSLRFKPLVILHLILEMNFSRVLCFTNSRENSHRL---VQAFGG 405
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+ + E+S R LK F +GKIQ+L+S+DAM RG+DV+GV VVNYD P Y++
Sbjct: 406 --VTVAEFSSRYGPGQRKGILKQFEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQYLR 463
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
TY+HR GRTARAG+ G+ FTLL K + +RF ++L++ H PS L++ L P Y+
Sbjct: 464 TYVHRVGRTARAGKSGQAFTLLLKVQERRFLRMLEEGGVPGLERHDTPSELLQPLVPQYE 523
>gi|302683871|ref|XP_003031616.1| hypothetical protein SCHCODRAFT_55946 [Schizophyllum commune H4-8]
gi|300105309|gb|EFI96713.1| hypothetical protein SCHCODRAFT_55946 [Schizophyllum commune H4-8]
Length = 566
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 263/528 (49%), Gaps = 99/528 (18%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVW--------QETIGPGLFERDLCINSPTGSGKTLSY 86
L R + L +GI+ LF VQ A+ + P RD C+++PTGSGKTL+Y
Sbjct: 87 LSQRTRKRLHELGITELFAVQTALLPFLLANPSRAVYTPYNLPRDACVSAPTGSGKTLAY 146
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
PIV+ LS+R LRALVV+PTRDL
Sbjct: 147 VTPIVEVLSSRITTRLRALVVVPTRDL--------------------------------- 173
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
+ QVK+ F A+ GL +G+ GQ S + E S+++ D L
Sbjct: 174 ------VTQVKETFEAVGKGRGLKIGVVTGQHSFSHEQSQIVG----------DSTTSLA 217
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
S VDIL+ TPGRL+DH+N T FTL+HL +L++DE DRLL +++Q WL TVL T
Sbjct: 218 GGTSKVDILICTPGRLIDHLNGTTNFTLQHLRFLIIDEADRLLAQSFQGWLSTVLAATTQ 277
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD-------KPYPRLVKMVLSATLTQDP 319
S + LP A + + GF + +P K++ SATLTQDP
Sbjct: 278 STVPSTSSQDSNLPRAEAAAPHVVPA---LGFPNVLSRQPERPRSSCQKLLFSATLTQDP 334
Query: 320 NKLAQLDLHHPLF-----------LTTG---------ETRYKLPERLESYKLICESKLKP 359
KLA L+LH+P + +T+G R+ +PE L + +C+ KP
Sbjct: 335 GKLAALNLHNPKYFIVRSKAKRETITSGILPDVADVVMERFSMPEGLTEHMAVCDPADKP 394
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-----------IKIKEYSGLQ 408
L L+ S G +VFT S EST RL L F + R + I YS
Sbjct: 395 LAFFHLITSHGIRNALVFTKSAESTTRLVRLFEFFEKARAERSPAGDSRPVTISAYSSDL 454
Query: 409 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 468
+ R L+ FR+ +IQ+LV+SD ++RG+DV V++VV+YD P ++ Y+HR GRTARA
Sbjct: 455 GGAERRAILERFRKQEIQILVASDLISRGLDVSHVSHVVSYDAPVDVRKYVHRVGRTARA 514
Query: 469 GQLGRCFTLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVY 515
G+ G +TL+ + E + FK ++++AD+ S + +E LRP+Y
Sbjct: 515 GRAGSAWTLVEEQEARYFKNMMKEADHLPSLKKVKVDRKEMEELRPLY 562
>gi|344246330|gb|EGW02434.1| ATP-dependent RNA helicase DDX51 [Cricetulus griseus]
Length = 605
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 276/539 (51%), Gaps = 92/539 (17%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 111 KVQPFLPTWLAEPSCVKKSVTEDLTPIEDIPGVHPDLQKQLRANGISSYFPVQAAVIPAL 170
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 171 LESTDSGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 230
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 231 LAQQVS---------KVFNIYTD------------------------------ATPLRVA 251
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + + DILVATPGRL+DHI+ T GF
Sbjct: 252 LVTGQKSLAKEQESLVQK-------------TVDGYRCLADILVATPGRLVDHIDQTPGF 298
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +LV+DE DR++ +Q+WLP V+ +E + + ++ T C
Sbjct: 299 SLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-FHSEGPSGSCALLQRTQPQAVTTASTC 357
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GE 337
F P L K++ SATLTQ+P KL +L L+ P +T
Sbjct: 358 -----FPQMP---LQKLLFSATLTQNPEKLQRLGLYQPRLFSTRLGHKGPKDTVEVDENL 409
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+Y P L + + C KPL ++ L+ + + + FT+S E +HRL L FG
Sbjct: 410 GKYTFPVGLTHHYVPCRLSSKPLIVLHLVLGMNFSRALCFTNSREHSHRLFLLAQAFGG- 468
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ + E+S R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y++T
Sbjct: 469 -VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRT 527
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
Y+HR GRTARAG+ G+ FTLL K + ++F +++ +A H IP L++ L Y+
Sbjct: 528 YVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELACHEIPRELLQPLVSRYE 586
>gi|224072122|ref|XP_002196880.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Taeniopygia
guttata]
Length = 707
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 273/538 (50%), Gaps = 95/538 (17%)
Query: 6 KKSMPVLP-WMRSPVDVS-LFED--CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K P LP W+ P V D CP+ ++P + P+L LQ GI S FPVQ A
Sbjct: 212 QKVQPFLPQWLAEPKRVQKRIRDNLCPVRNMPGIHPQLLKKLQRNGIDSFFPVQAEVIPA 271
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT+
Sbjct: 272 ILQSAANGYLLGRGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCHVRALVVLPTK 331
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV+ +F + D GL V
Sbjct: 332 ELAQQVS---------KVFNIYTD------------------------------GTGLKV 352
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
L GQ S A E L++ K G C S DI+VATPGRL DHIN T G
Sbjct: 353 VLITGQKSFAKEQEMLVE--KKVTGYC-----------SLADIVVATPGRLTDHINQTPG 399
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +LVVDE DR++ + +Q L +++ EN F + G L
Sbjct: 400 FSLTQLRFLVVDEADRMIDDMHQNCLNQIVKAA-FQGENSSGSNMLFQRTKPGPLTAASS 458
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------G 336
C P L K++ SATLTQDP KL QLDL P T+
Sbjct: 459 CS--------PQIPLQKLLFSATLTQDPEKLQQLDLFQPRLFTSVYSEKNRDGTETEQDT 510
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y LPE L + C+ KPL L+ + + + + FT+S E++HRL L+ FG
Sbjct: 511 TNKYTLPEGLSQCYVPCDLNSKPLLLLYFMLKMKFTRVLCFTNSREASHRLFLLVQAFGG 570
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + E+S + R +T+K F +GKIQ+L+S+DA RG+DV+ VN V+NYD P +I+
Sbjct: 571 --ITVAEFSSRLTPNERKRTMKEFEQGKIQLLISTDATARGIDVKRVNYVINYDAPQFIR 628
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
TY+HR GRTARAG+ G F+L+ + + +RF ++L+ A H + + SL+P+
Sbjct: 629 TYVHRVGRTARAGEAGVAFSLVLRIQERRFLRMLRDAGIRDIKKHPVKGN---SLKPL 683
>gi|118098682|ref|XP_415229.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Gallus gallus]
Length = 764
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 277/544 (50%), Gaps = 98/544 (18%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K P LP W+ P V + E+ P+ +P + P+L LQ GI S FPVQ A
Sbjct: 267 QKVQPFLPHWLAQPKLVQKRIKENLIPIRDVPGIHPKLLKKLQMNGIESFFPVQAEVIPA 326
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
V Q +G G + +D+C+++PTGSGKTLS+ +PIVQ L +R V +RALVVLPT+
Sbjct: 327 VLQSASNGYLVGQGGYRPKDICVSAPTGSGKTLSFVIPIVQVLLDRVVCQVRALVVLPTK 386
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV+ +F + D GL V
Sbjct: 387 ELAQQVS---------KVFNIYTD------------------------------GTGLKV 407
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
L GQ S A E L++ K G C S DI+VATPGRL DHI+ T G
Sbjct: 408 VLITGQKSFAKEQEMLVQ--KKVTGYC-----------SLADIIVATPGRLADHISKTPG 454
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +L+VDE DR++ + +Q WL V++ EN F + G +
Sbjct: 455 FSLTQLRFLIVDEADRMIDDMHQNWLNQVVKAA-FQAENEAGSNMLFQRTKPGPVTAASC 513
Query: 292 CGVERGFKDKPYPR--LVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------------- 335
C YP+ L K++ SATLTQDP KL QL L P T+
Sbjct: 514 C----------YPQIPLQKLLFSATLTQDPEKLQQLGLFQPRLFTSVYSEKKTLRDGTET 563
Query: 336 ---GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
E +Y LPE L + C+ KPL L+ + + + + FT+S E++HRL L+
Sbjct: 564 KEDCEEKYTLPEGLSQSYVPCDLNSKPLLLLHFMLTKKFTRVLCFTNSREASHRLFLLVQ 623
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
FG I + E+S + R +T+K F +GKIQ+L+S+DA RG+D++GVN V+NYD P
Sbjct: 624 AFGG--ITVAEFSSRLPPNERQRTMKEFEQGKIQLLISTDATARGIDIKGVNCVINYDTP 681
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
+I+TYIHR GRTARAG+ G F+++ + + +RF ++L+ A H + L++ L
Sbjct: 682 QFIRTYIHRVGRTARAGKAGLAFSMVLRIQERRFLRMLKDAGIPDIKQHLVKGKLLKPLV 741
Query: 513 PVYK 516
Y+
Sbjct: 742 QQYE 745
>gi|51467974|ref|NP_001003864.1| ATP-dependent RNA helicase DDX51 [Danio rerio]
gi|82200454|sp|Q6DRI7.1|DDX51_DANRE RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
gi|49619011|gb|AAT68090.1| DEAD/H box 51 RNA helicase [Danio rerio]
Length = 652
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 267/532 (50%), Gaps = 92/532 (17%)
Query: 11 VLP-WMRSPVDVSLFEDC-----PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---E 61
VLP W+ P DV + +D P+ +P + P L LQ GI S FPVQ V E
Sbjct: 168 VLPQWLSQP-DV-IQKDIKSNLIPISEVPGICPTLLRKLQTNGIQSFFPVQAEVIPAILE 225
Query: 62 TIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
++G GL RD+C+++PTGSGKTL++ +P+VQ LS R VR +RAL VLPT++LA
Sbjct: 226 SVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVRALAVLPTKELA 285
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
QV+ +VF+A L V +
Sbjct: 286 QQVS---------------------------------------NVFSAYTEGSSLKVVMI 306
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
GQ S A E + L ++ G+ + S DI+VATPGRL+DHIN F+L
Sbjct: 307 TGQKSFAAEQTAL---SEIRGGVSH----------SMADIVVATPGRLVDHINKNSSFSL 353
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
+HL +L++DE DR++ +Q+WL V + S + S F + G +
Sbjct: 354 QHLRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGE--THTSVFRRTVPGPITAASLS-- 409
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT---------GETRYKLPE 344
P L K++ SATLTQ+P KL LDLH P LF +T + + P+
Sbjct: 410 ------PPQIPLQKLLFSATLTQNPEKLQLLDLHQPRLFSSTHSLTDNPAQSQDTFHFPQ 463
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
L Y + C KPL ++ L L + FT+S E HRL L+ FG +++ E+
Sbjct: 464 GLSEYYVPCTFSKKPLIILHFLLRLKFSPALCFTNSREGAHRLYLLVKLFGG--VEVAEF 521
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
S R KTLK F +GKI +L+S+DA RG+D+ GV V+NYD P YI+TYIHR GR
Sbjct: 522 SSKLSPGERQKTLKDFEKGKIPLLISTDAAARGIDINGVKCVINYDAPQYIRTYIHRVGR 581
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
TARAG+ G FT L K + KRF K++ A + + ++S+ Y+
Sbjct: 582 TARAGKAGLAFTFLLKVQEKRFLKMVSDAGSPGIQKQHVHPEALKSMESRYE 633
>gi|148688064|gb|EDL20011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Mus musculus]
Length = 639
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 276/544 (50%), Gaps = 98/544 (18%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D L V
Sbjct: 265 LAQQVS---------KVFNIYTD------------------------------TTPLRVA 285
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 286 LVTGQKSLAKEQESLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGF 332
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ A+ + GS ++R
Sbjct: 333 SLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AAFYSEGPTGSCALLQRT 380
Query: 293 ---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------------- 335
V P L K++ SATLTQDP KL +L L+ P +T
Sbjct: 381 QPQAVTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDTAEVD 440
Query: 336 -GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y P L + + C KPL ++ L+ + + + FT+S E++HRL L F
Sbjct: 441 ENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAF 500
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + E+S R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y
Sbjct: 501 GG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQY 558
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A H IP L++ L
Sbjct: 559 LRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELTHHEIPRKLLQPLVAR 618
Query: 515 YKSG 518
Y++
Sbjct: 619 YETA 622
>gi|395332279|gb|EJF64658.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 694
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 266/542 (49%), Gaps = 106/542 (19%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGS 80
D L R++ LQ++GI+ LF VQ AV + P DLC+++PTGS
Sbjct: 190 DERTGLSGRMRRRLQDLGITELFAVQTAVVPLLLSSPRSRALYRPYDPPEDLCVSAPTGS 249
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
GKTL+Y LPIV+ LS+R V LRALVVLPTRDL LQV
Sbjct: 250 GKTLAYVLPIVEILSSRVVTRLRALVVLPTRDLVLQV----------------------- 286
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
++ F AIA GL +G A GQ S A E ++L+ E
Sbjct: 287 ----------------RETFEAIAKGRGLKIGTATGQHSFAHEQAQLVAERNEE------ 324
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
LQ S VDIL+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q WL V
Sbjct: 325 ----LQGGSSKVDILICTPGRLIDHLNGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQV 380
Query: 261 LQLTRSDNENRFSDAS---------------------TFLPSAFGSLKTIRRCGVERGFK 299
L TR + S AS + P+ L+ + V +
Sbjct: 381 LAATRPPRASDDSGASLSSELTTASINLAARGRPHPDSLSPTFLHLLRGVHY--VRTDYD 438
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE-----------------TRYKL 342
+K P K++ SATLT+DP K+A L L P ++ ++ +
Sbjct: 439 EKKEPSCQKLLFSATLTRDPAKIAALGLRQPKYVVVQSPKTSAASKEEGVLDFVMEKFTM 498
Query: 343 PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL----- 397
P L + ++CES +KPL L L+ + G +VFT S EST RL L F
Sbjct: 499 PATLTEHMVVCESSVKPLMLFHLVHARGVTNALVFTKSAESTARLVRLFEFFESAHSDSQ 558
Query: 398 --RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
RI + YS R L+ F+ +Q+LV SD ++RG+D+ V++VV+YD P
Sbjct: 559 GRRIVARAYSSDLAPGERKSILEQFKSQDVQLLVCSDLISRGIDISHVSHVVSYDVPVDF 618
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPV 514
+ Y+HR GRTARAG+ G +TL+ + E + FK +L++AD+ D + + +E L+P
Sbjct: 619 RKYVHRVGRTARAGRAGDAWTLVEEQEARYFKTMLKEADHLDKVKRVRVADADVEPLKPA 678
Query: 515 YK 516
Y+
Sbjct: 679 YE 680
>gi|449663831|ref|XP_002165436.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Hydra
magnipapillata]
Length = 734
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 260/508 (51%), Gaps = 98/508 (19%)
Query: 6 KKSMPVLPWMRSPVDVSLFED----CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--- 58
K+++P W+ PV +S D +D L + L++ GI LFPVQ AV
Sbjct: 182 KRALP--RWLAEPVSISANIDKENESIVDSLDYITKNTINNLKSSGIEHLFPVQTAVITY 239
Query: 59 -WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+T RD+C+ +PTGSGKTLSY LP++++L+ V+ L LVVLP++DLA+QV
Sbjct: 240 MHSQTKMLNFPPRDICVEAPTGSGKTLSYVLPVIESLTQYIVKELYCLVVLPSKDLAIQV 299
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
K VF++ + VGL G
Sbjct: 300 ---------------------------------------KQVFSSYLKGTNIKVGLICGV 320
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
++ E S+L+ C P+ + + V+ILVATPGRL+DH+ T GF+L+HL
Sbjct: 321 KTLEKERSKLV---------CKGPQGYM----NMVEILVATPGRLVDHLKTTSGFSLKHL 367
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL + Y WL VL+ +S + +F T R
Sbjct: 368 RFLVIDEADRLLSQDYSGWLELVLESAQSLSYRKFPHPLTV-----------------RT 410
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------------GETRYK 341
F+ P L K++ SATLTQ+P KLA L L++P+ + E R+
Sbjct: 411 FQKNIIP-LQKLLFSATLTQNPEKLAPLRLYNPILFISKRDNEKTKKDGSTENKSEFRFI 469
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+PE+L +I + +LKPL +V L+ L ++ + FT S+E+THRL LL G +
Sbjct: 470 VPEQLVEKMVIVKEELKPLVIVHLMLKLKYKRILCFTKSIEATHRLHLLLQSIGGFTVA- 528
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E+S ++ R ++ F+ G I L+SSDAM RGMD++ VN VVNYD PA KTY+HR
Sbjct: 529 -EFSSNLTETQRKGIIRDFKNGSIDALISSDAMARGMDIDNVNMVVNYDSPANSKTYVHR 587
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG G T+L K +V FKK+
Sbjct: 588 VGRTARAGNRGEALTILTKKKVYPFKKM 615
>gi|351698593|gb|EHB01512.1| ATP-dependent RNA helicase DDX51, partial [Heterocephalus glaber]
Length = 536
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 272/538 (50%), Gaps = 103/538 (19%)
Query: 14 WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET-------- 62
W+ +P V ++ +D P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 54 WLANPSCVKKNVTKDLVPIEDIPEVHPDLQKQLRARGISSYFPVQAAVIPALLENAASGF 113
Query: 63 -IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALV+LPT++LA QV+
Sbjct: 114 LVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHVRALVMLPTKELAQQVS-- 171
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+F + D A L V L GQ +
Sbjct: 172 -------KVFNIYTD------------------------------ATPLRVALVTGQKPL 194
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
A E L+++ + DI+VATPGRL+DHIN T GF+L+ L +L
Sbjct: 195 ATEQESLVQK-------------TADGFRCLADIVVATPGRLVDHINQTPGFSLQQLRFL 241
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS-----LKTIRRCGVE 295
VVDE DR++ +Q+WLP V+ + LPS + L+ R V
Sbjct: 242 VVDEADRMIDSMHQSWLPRVM--------------AAALPSKGPADPCALLQRWRPQAVT 287
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-----------------GET 338
P L K++ SATLTQ+P KL QL L+ P +T E
Sbjct: 288 AASACCPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTRLAHRVPKDEGTEVDRDPEG 347
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ + + FT+S E++HRL LL FG
Sbjct: 348 KYTFPAGLTHHYVPCSLSSKPLAIMHLVVGKNFSRALCFTNSRENSHRLFLLLQAFGG-- 405
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R K LK F +GKIQ+L+S+DA RG+DV GV V+NYD P Y++TY
Sbjct: 406 VSVAEFSSRYGPGHRRKVLKQFEQGKIQLLISTDATARGIDVLGVELVINYDAPQYLRTY 465
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + + F ++L + H IPS L++ L P Y+
Sbjct: 466 VHRVGRTARAGKTGQAFTLLLKVQERTFLRMLAEGGAPELARHEIPSKLLQPLVPRYE 523
>gi|40538825|ref|NP_081432.2| ATP-dependent RNA helicase DDX51 [Mus musculus]
gi|81892367|sp|Q6P9R1.1|DDX51_MOUSE RecName: Full=ATP-dependent RNA helicase DDX51; AltName: Full=DEAD
box protein 51
gi|38614333|gb|AAH60646.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Mus musculus]
Length = 639
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 276/544 (50%), Gaps = 98/544 (18%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D L V
Sbjct: 265 LAQQVS---------KVFNIYTD------------------------------TTPLRVA 285
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 286 LVTGQKSLAKEQESLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGF 332
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ A+ + GS ++R
Sbjct: 333 SLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AAFYSEGPTGSCALLQRT 380
Query: 293 ---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------------- 335
+ P L K++ SATLTQDP KL +L L+ P +T
Sbjct: 381 QPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDTAEVD 440
Query: 336 -GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y P L + + C KPL ++ L+ + + + FT+S E++HRL L F
Sbjct: 441 ENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAF 500
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + E+S R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y
Sbjct: 501 GG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQY 558
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A H IP L++ L
Sbjct: 559 LRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELTHHEIPRKLLQPLVAR 618
Query: 515 YKSG 518
Y++
Sbjct: 619 YETA 622
>gi|74220751|dbj|BAE31347.1| unnamed protein product [Mus musculus]
Length = 639
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 276/544 (50%), Gaps = 98/544 (18%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D L V
Sbjct: 265 LAQQVS---------KVFNIYTD------------------------------TTPLRVA 285
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 286 LVTGQKSLAKEQESLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGF 332
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ A+ + GS ++R
Sbjct: 333 SLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AAFYSEGPTGSCALLQRT 380
Query: 293 ---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------------- 335
+ P L K++ SATLTQDP KL +L L+ P +T
Sbjct: 381 QPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDTAEVD 440
Query: 336 -GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y P L + + C KPL ++ L+ + + + FT+S E++HRL L F
Sbjct: 441 ENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAF 500
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + E+S R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y
Sbjct: 501 GG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQY 558
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A H IP L++ L
Sbjct: 559 LRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELTHHEIPRKLLQPLVAR 618
Query: 515 YKSG 518
Y++
Sbjct: 619 YETA 622
>gi|348688141|gb|EGZ27955.1| hypothetical protein PHYSODRAFT_258291 [Phytophthora sojae]
Length = 550
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 190/514 (36%), Positives = 259/514 (50%), Gaps = 86/514 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQ-VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L P + +L + I S FPVQ VA+ + D+CI++PTGSGKTL+Y +PIVQ
Sbjct: 27 LAPEVSRSLAALSIRSFFPVQAVAIPKILASDSDRVTDICISAPTGSGKTLTYVVPIVQR 86
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L R V +RAL+VLP+RDLA+QV H I + V+
Sbjct: 87 LLPRVVCRVRALIVLPSRDLAVQV------------------HQIVQQFVK--------- 119
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
L GLA+GQS+ A E S L+ E +S VD
Sbjct: 120 ------------GTPLKCGLAIGQSNFAVEQSALVGDVSGE-----KVSSTTDGGRSLVD 162
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
ILVATPGRL+DH+ T GFTL+HL ++VDE DRLL ++YQ W+P V + E
Sbjct: 163 ILVATPGRLVDHLEQTPGFTLQHLQIMIVDEADRLLNQSYQDWIPKVYASVFNGQE---V 219
Query: 274 DASTFLPSAFGSLKTIRRC-GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
D A G T RR + R P L +++LSATLT++P KLA + + +
Sbjct: 220 DEEGL---ALGVGVTCRRQDSINRRRIRTP---LTRVLLSATLTRNPRKLAAIGMSNAEL 273
Query: 333 LTTGE-------------------------------TRYKLPERLESYKLICESKLKPLY 361
G Y P LE Y + C++ KPL
Sbjct: 274 TKIGRIDDPLADNAKQGTAGDSDDDDEDGEEASGSAKMYSTPTNLEEYWIECDTGSKPLV 333
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 421
L+ LL IVFT+SV STHRL LL + +I+E+S Q RS + F+
Sbjct: 334 LLELLSEFAGALSIVFTASVNSTHRLARLLQLYSTHPERIREFSSSLSQKQRSALVADFK 393
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
G+++ +V SDAM RGMD+E V NVVNYD P++IKTYIHR GRTARAG+ GRC TL+
Sbjct: 394 AGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMG 453
Query: 482 EVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
++K ++L+KADN+ + + +++L P Y
Sbjct: 454 QMKGMMRMLKKADNNKLKPYPLQQEHMKTLVPRY 487
>gi|417411466|gb|JAA52168.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 535
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 276/542 (50%), Gaps = 96/542 (17%)
Query: 7 KSMPVLP-WMRSPVDV--SLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ + + P L+ L+ GISS FPVQ AV
Sbjct: 41 KVHPFLPKWLAEPSRVRKNVTEDRVPVEDVIEVHPDLQKKLRAHGISSYFPVQAAVIPAV 100
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ RDLC+++PTGSGKTL++ LP+VQ L RAV +RALVVLPT++
Sbjct: 101 LESAANGFLVGRGGYQPRDLCVSAPTGSGKTLAFVLPVVQALLWRAVCHVRALVVLPTKE 160
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 161 LAQQVS---------RVFNVYTD------------------------------ATPLRVA 181
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 182 LVTGQKSLAKEQETLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGF 228
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQ--LTRSDNENRFSDASTFLPSAFGSLKTIR 290
+L L +LV+DE DR++ +Q+WLP V+ R ++ + P A + T
Sbjct: 229 SLRQLRFLVIDEADRMMDSMHQSWLPRVVAAAFPREGAQDPCALLQRRQPQAVTAAST-- 286
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR----------- 339
C P L K++ SATLTQ+P KL QL L+ P +T R
Sbjct: 287 -C--------SPQMPLQKLLFSATLTQNPEKLQQLGLYQPRLFSTQPARGGPGDADADVG 337
Query: 340 ----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
Y P L + + C + KPL ++ L+ L + + FT+S E+ HRL L+ FG
Sbjct: 338 SGAKYTFPSGLSHHYVPCSLQAKPLVILHLILHLSFSRVLCFTNSRENAHRLFLLVQAFG 397
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ + E+S R LK F +GKIQ+L+S+DA RG+DV GV VVNYD P Y+
Sbjct: 398 G--VAVAEFSSRYGPGWRKMILKQFEQGKIQLLISTDATARGIDVRGVQLVVNYDAPQYL 455
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+TY+HR GRTARAG+ G+ FTLL K + ++F ++L +A H P+ L++ L P Y
Sbjct: 456 RTYVHRVGRTARAGKTGQAFTLLLKVQERKFLRMLTEAGAPELQRHDAPTELLQPLVPRY 515
Query: 516 KS 517
++
Sbjct: 516 EA 517
>gi|299750023|ref|XP_001836493.2| ATP-dependent RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298408706|gb|EAU85306.2| ATP-dependent RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 692
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 264/529 (49%), Gaps = 102/529 (19%)
Query: 43 LQNMGISSLFPVQVAVWQETI-----GPGLFE-----RDLCINSPTGSGKTLSYALPIVQ 92
L +GI+ LF VQ A+ + G GL+ DLC+++PTGSGKTL+Y LPIV+
Sbjct: 203 LAELGITELFAVQTAIVPHLLTGSSSGGGLYRPYDPPYDLCVSAPTGSGKTLAYVLPIVE 262
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
TL R V LRALVVLPTRDL
Sbjct: 263 TLQTRVVTRLRALVVLPTRDL--------------------------------------- 283
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
+ QV++ F AI+ GL +G A GQ S A E S+L+ YD L S V
Sbjct: 284 VGQVRETFEAISKGTGLKIGSASGQHSFAHEQSQLV----------YDRTSHLAGGSSKV 333
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
DIL+ TPGRLMDH+ T F+L+HL YLV+DE DRLL +++Q WL VL R+ + F
Sbjct: 334 DILICTPGRLMDHLVGTPNFSLQHLRYLVIDEADRLLAQSFQDWLAQVLAAIRTPKKGTF 393
Query: 273 SDASTF--LPSAFG--SLKTIRRCGVERGFKDKPYPRLV------------KMVLSATLT 316
D++T +PS+ +++ I P P + K++ SATLT
Sbjct: 394 LDSTTVDNIPSSTSPYTIQPIPDGLAPNTLHQLPIPDIPTFLNEDRASSCQKLLFSATLT 453
Query: 317 QDPNKLAQLDLHHPLFL--TTGE-------------TRYKLPERLESYKLICESKLKPLY 361
+DP K+A LDL P ++ +G+ ++ +P+ L + ++ KPL
Sbjct: 454 RDPGKIAALDLRDPRYIIVQSGKDQSVEENVTQVVLEKFAVPDTLREHMIVVNPSKKPLI 513
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-----------IKIKEYSGLQRQ 410
+ L+ S +VFT S EST RL L F E R I + YS
Sbjct: 514 MFHLVYSHQVTNALVFTKSAESTTRLLRLFEFFEEARMAAGGEDTSSRIVARAYSSDSPP 573
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
S R L+ F+ KI +L+ SD ++RG+D+ VN+VV+YD P I+ Y+HR GRTARAG+
Sbjct: 574 SERKSILEDFKAQKIHILICSDLISRGIDISHVNHVVSYDAPVDIRKYVHRVGRTARAGR 633
Query: 471 LGRCFTLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVYKSG 518
G +TL+ + E FKK++++AD+ DS + + L P Y++
Sbjct: 634 EGDAWTLVEEQEAHYFKKMMKEADHLDSVKRLRVAETATAPLEPFYEAA 682
>gi|392564142|gb|EIW57320.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 682
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 191/540 (35%), Positives = 272/540 (50%), Gaps = 102/540 (18%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAV----WQETIGPGLFE-----RDLCINSPTGS 80
D L +++ LQ +GI+ LF VQ AV T L+ DLC+++PTGS
Sbjct: 182 DERTGLSGKMRKRLQELGIAELFAVQTAVVPLLLSSTRAQSLYRPYDPPEDLCVSAPTGS 241
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
GKTL+Y LPIV+ LS R V LRAL+VLPTRDL +QV
Sbjct: 242 GKTLAYVLPIVEVLSARIVTRLRALIVLPTRDLVVQV----------------------- 278
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
++ F A+A GL +G A GQ S A E S+L+ E G
Sbjct: 279 ----------------RETFEAVAKGRGLKIGTATGQHSFAHEQSQLV----AERG---- 314
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
LQ S VD+L+ TPGRLMDHI T F+L+HL +LV+DE DRLL +++Q WL V
Sbjct: 315 --SDLQGGSSKVDVLICTPGRLMDHITGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQV 372
Query: 261 LQLTRSD--NENRFSDAST------------FLPSAFGSLKTIRRCGVER-GFKDKPYPR 305
L +TR +++ S+AST L AF L +R R ++ P
Sbjct: 373 LAVTRPPRPSDDTRSEASTPPSHTTPRPHPDALAPAF--LHLLRGAPYTRTDIDERKEPS 430
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFL---------TTGET--------RYKLPERLES 348
K++ SATLT+DP K+A L L P ++ T E ++ +P L
Sbjct: 431 CQKLLFSATLTRDPAKIAALGLRAPRYIVVQGRKSAAATKEEGVLDFVMEKFTMPATLTE 490
Query: 349 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-GELR--------I 399
+ L+CES KPL L ++ + G +VFT S ES RL L F G LR +
Sbjct: 491 HMLVCESAAKPLMLFHMVHARGVTNALVFTKSAESATRLVRLFEFFEGALRAADASKKPV 550
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
+ YS R L+ FR +I +L+ SD ++RG+D+ V++VV+YD P + Y+
Sbjct: 551 VARAYSSDLAPGERKAILEQFRNQEINILICSDLVSRGIDISHVSHVVSYDVPVDFRKYV 610
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN-DSCPIHSIPSSLIESLRPVYKSG 518
HR GRTARAG+ G +TL+ + E + FK +L++AD+ + + S + SL+P Y++
Sbjct: 611 HRVGRTARAGREGDAWTLVEEQEARYFKGMLKEADHLEKVKRLRVSDSDVASLKPAYETA 670
>gi|384494370|gb|EIE84861.1| hypothetical protein RO3G_09571 [Rhizopus delemar RA 99-880]
Length = 483
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 185/495 (37%), Positives = 260/495 (52%), Gaps = 86/495 (17%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW-----QE 61
K+M V W+ P VS + C LD + L P L +++G+SSLF VQ+AV +
Sbjct: 17 KNMGVPDWLLHPTVVSPKDTCELDQV-GLSPWLVQRCKDIGLSSLFAVQMAVIPVFLRHK 75
Query: 62 TIGPGL-FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
T+ + DLCI++PTGSGKT++YALPIV LS R V+ LRA+VVLPTRDL +QV
Sbjct: 76 TLYDTIKVSGDLCISAPTGSGKTMAYALPIVDILSKRVVKRLRAVVVLPTRDLVVQV--- 132
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
K+ F A L V GQ S
Sbjct: 133 ------------------------------------KETFDAFVKGTDLVVAAVSGQQSF 156
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
E L+ + E+ +S VDIL+ATPGRL+DH+N+T FTL+H+ +L
Sbjct: 157 THEQHVLVG----------NEEESYPGGKSRVDILIATPGRLIDHLNSTPNFTLQHVRFL 206
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF----------LPSAFGSLKTIR 290
V+DE DRLL +++ WL +L T N +DA LP A T
Sbjct: 207 VIDEADRLLNQSFNDWLNRILLAT---NPVVNADAPLLGFKTDKNGITLPDAIAP--TFL 261
Query: 291 RCGVERGFKDKPYPR---LVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------GETRY 340
+ + D P+ + K++ SATLT++P K+A L L+ P +++ + Y
Sbjct: 262 QSHYKLPVTDLDIPKAPFIQKLLFSATLTKNPAKIAGLHLNEPEYISVQHEDEDHAQREY 321
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL--- 397
PE L+ Y +I ++ KPL ++ LL LG + + FT SVEST RL TL+N + L
Sbjct: 322 TTPEGLKEYMIIVSTEKKPLTVIYLLHQLGVKSGLCFTKSVESTERLQTLINAYEALQPE 381
Query: 398 --RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
RIK+KEYS R + R LK F++G+I +L+ SD + RG+D++ V VV+YD PAY+
Sbjct: 382 EKRIKVKEYSSELRPTERKAVLKQFKDGEIDLLICSDLIGRGIDLDSVEYVVSYDAPAYM 441
Query: 456 KTYIHRAGRTARAGQ 470
YIHR GRTARAG+
Sbjct: 442 DKYIHRVGRTARAGR 456
>gi|301117032|ref|XP_002906244.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107593|gb|EEY65645.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 564
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/514 (36%), Positives = 261/514 (50%), Gaps = 86/514 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQ-VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L P + L + I S FPVQ VA+ + D+CI++PTGSGKTL+Y +PIVQ
Sbjct: 29 LAPEVCATLTKLNIRSFFPVQAVAIPKILASDSDRVTDICISAPTGSGKTLTYVVPIVQR 88
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L R V +RAL+VLP+RDLA+QV H I + VQ
Sbjct: 89 LLPRVVCRVRALIVLPSRDLAVQV------------------HQIVQQFVQ--------- 121
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
L GLA+GQS+ A E + L+ I +S VD
Sbjct: 122 ------------GTPLKCGLAIGQSNFAAEQNALVGATSGNKVIATTDGG-----RSLVD 164
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
ILVATPGRL+DH+ T GFTL+HL ++VDE DRLL ++YQ W+ V + E
Sbjct: 165 ILVATPGRLVDHLEQTPGFTLQHLQIMIVDEADRLLNQSYQDWISKVYASVFNGQEVD-E 223
Query: 274 DASTFLPSAFGSLKTIRRC-GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH--- 329
D T G T RR + R P L +++LSATLT++P KLA + + +
Sbjct: 224 DGLTL-----GVGVTCRRQDSINRRRIRTP---LTRVLLSATLTRNPRKLAAIGMSNAEL 275
Query: 330 --------PL-------------------FLTTGETR-YKLPERLESYKLICESKLKPLY 361
PL TG + Y P L+ Y + C++ KPL
Sbjct: 276 TKIGRIDDPLADNAKLGNAGDSDDEDEDGDEATGSKKMYSTPTNLDEYWIECDTGSKPLV 335
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 421
L+ LL IVFT+SV STHRL LL + +I+E+S Q RS + +
Sbjct: 336 LLELLSEFAGSLSIVFTASVNSTHRLARLLQLYSTHPERIREFSSSLSQKQRSSLVADCK 395
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
G+++ +V SDAM RGMD+E V NVVNYD P++IKTYIHR GRTARAG+ GRC TL+
Sbjct: 396 AGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKLG 455
Query: 482 EVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
++K ++L+KADN+ +++ +++L P Y
Sbjct: 456 QMKSMMRMLKKADNNKLKPYALQQEHMKTLVPRY 489
>gi|395840150|ref|XP_003792928.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Otolemur garnettii]
Length = 665
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 271/537 (50%), Gaps = 90/537 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P + ++ E P++ +P + P L+ L+ GIS FPVQ AV
Sbjct: 173 KVQPFLPAWLAEPSCIQKNIAEGLVPIEDIPEVHPDLQKQLRAQGISFYFPVQAAVIPTL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L R V +RALVVLPT++
Sbjct: 233 LESAANGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLQRVVCHVRALVVLPTKE 292
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D L V
Sbjct: 293 LAQQVS---------KVFNIYTD------------------------------TTPLRVA 313
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ ++A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 314 LITGQKTLAKEQESLVQK-------------TTDGYRCLADIVVATPGRLVDHIDQTPGF 360
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +LV+DE DR++ +Q+WLP V+ F P + ++
Sbjct: 361 SLQQLRFLVIDEADRMIDSMHQSWLPRVVAAA-------FQGEGPPDPCVLLQRRQLQ-- 411
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-----------GET--R 339
V P L K++ SATLTQ+P KL QL LHHP +T G+ +
Sbjct: 412 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHHPRLFSTSLACKGPQDADGDVGGK 471
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
Y P L + + C KPL ++ L+ + + FT+S E++HRL L+ FG +
Sbjct: 472 YAFPVGLTHHYVPCSLSTKPLLVLHLILEKSFSRVLCFTNSRENSHRLFLLVQAFGG--V 529
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
+ E+S R LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y++TY+
Sbjct: 530 SVAEFSSRYGPGQRKMILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYV 589
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
HR GRTARAG G+ FTLL K + +RF ++L + + H + S L++ L P Y+
Sbjct: 590 HRVGRTARAGNAGQAFTLLLKVQERRFLRMLTEGGVPALQRHELLSELLQPLVPRYE 646
>gi|393245833|gb|EJD53343.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 522
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 189/521 (36%), Positives = 260/521 (49%), Gaps = 96/521 (18%)
Query: 29 LDHLPC--LDPRLKVALQNMGISSLFPVQVAVWQETIG--------PGLFERDLCINSPT 78
LD LP L R K L+++GI LF +Q A+ + P RD+C ++PT
Sbjct: 52 LDALPAGTLSERTKKRLKDLGIRELFAIQTALVPHLLAKPTRALYLPYSPPRDVCASAPT 111
Query: 79 GSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSI 138
GSGKTL+Y LP+ + L+ RAV LRAL+VLPTRDL
Sbjct: 112 GSGKTLAYVLPLAELLAMRAVPRLRALIVLPTRDL------------------------- 146
Query: 139 AEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 198
+ QV++VF A+A GL VG G +S A E ++L+ +
Sbjct: 147 --------------VAQVREVFEAVAKGAGLRVGSVTGAASFAHEKAQLVDK-------- 184
Query: 199 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 258
+S VD+LV TPGRL+DH++ T GFTL+HL +LV+DE DRLL +++Q WL
Sbjct: 185 --------RGESKVDVLVCTPGRLIDHLDGTEGFTLQHLRFLVIDEADRLLTQSFQDWLA 236
Query: 259 TVLQL-----TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
VL T S A +FLP F S + R F+ P P KM+LSA
Sbjct: 237 RVLSAITPPSTPSSTLPSRPVAPSFLPHPFASAGSNLRPD----FEPPPRPSCQKMLLSA 292
Query: 314 TLTQDPNKLAQLDLHHPLFLTTG--------ETRYKLPERLESYKLICESKLKPLYLV-- 363
TLT+DP +LA L LHHP + E +PE L+ + + KPL L
Sbjct: 293 TLTRDPGRLAALGLHHPQYFVVSSSGGAAAPEEFGAVPEGLDERFCVIDPAEKPLVLAWI 352
Query: 364 ----ALLQSLGEEK--CIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKT 416
LL + GEEK +VF SVE+ RL LL ++ + YS +S+
Sbjct: 353 LREHVLLAAGGEEKKQVLVFCKSVEAATRLGVLLAAMLADVGKSVASYSSDAPRSL---- 408
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L+ FR G + VLV SD ++RG+DV V V+NYD P + Y+HR GRTARAG+ G +T
Sbjct: 409 LERFRTGAVDVLVCSDLVSRGLDVPSVAAVLNYDAPVDARKYVHRVGRTARAGRRGDAWT 468
Query: 477 LLHKDEVKRFKKLLQKAD-NDSCPIHSIPSSLIESLRPVYK 516
++ E + FK+LL A D + ++E LRP Y+
Sbjct: 469 MVEGQEARHFKELLAAAGRTDRVKKVRVAEKVLEPLRPAYE 509
>gi|388582635|gb|EIM22939.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 675
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 259/537 (48%), Gaps = 102/537 (18%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
EE KK +P + PVD + H + RLK L ++G SLF VQ+A
Sbjct: 165 EELKKLGLPDVFANEIPVDANQTFPSAQSHTLGIGQRLKSRLTDVGFESLFAVQLAAIPL 224
Query: 62 TIG-----------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
IG P RD+C+++PTGSGKTL Y LPIV+ +S R V LRALVVLPT
Sbjct: 225 LIGDLKENIRHPLYPSESPRDICVSAPTGSGKTLGYTLPIVEIISRRLVTRLRALVVLPT 284
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
RDL + QVK+ F A L
Sbjct: 285 RDL---------------------------------------VSQVKETFEIFAKGTDLK 305
Query: 171 VGLAVGQSSIADEISELIKRP-KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
VG GQ S E ++L+ + + AG C S VDIL+ATPGRL+DHIN+T
Sbjct: 306 VGTITGQQSFQQEQAKLVDQTDSVLAGGC-----------SKVDILIATPGRLIDHINST 354
Query: 230 RGFTLEHLCYLV---------------VDETDRLLREAYQAWL---------PTVLQLTR 265
FTL+HL +LV +DE DRLL +++Q+W+ P Q R
Sbjct: 355 PNFTLQHLRFLVGILTYIFMELIYAKVIDEADRLLNQSFQSWIDRIQVALTTPIQTQPKR 414
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
++ S + ++T R +RG + KM+ SATLT DP+K+ L
Sbjct: 415 DTHDALGYPNSMLIDEKHDLIETFERP--QRGVQ--------KMLFSATLTTDPSKIRSL 464
Query: 326 DLHHPLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 382
L+ P F+ + Y +P LE ++ E+ KPL L+ LL G + + FT SVE
Sbjct: 465 HLNEPKFVIVRNNKVEDYAIPTTLEERMIVSETAYKPLMLLHLLHQRGVRRALCFTKSVE 524
Query: 383 STHRLCTLLNHFGEL---RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
S RL LL F E + +S R K L FR+G++ +L+S+D + RG+D
Sbjct: 525 SATRLMHLLRLFKEEVGNGPTVASFSSDLSPQERQKMLTKFRDGEVDMLISTDVIARGID 584
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 496
++G+ NV+NYD P + Y+HR GRTARAG +G+ +TL+ E K FK + A ++
Sbjct: 585 IQGIENVINYDIPLDMPKYVHRVGRTARAGLVGKAWTLVEVQEAKYFKTYTKNAKHE 641
>gi|409048731|gb|EKM58209.1| hypothetical protein PHACADRAFT_171465 [Phanerochaete carnosa
HHB-10118-sp]
Length = 681
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 253/508 (49%), Gaps = 96/508 (18%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--------DLCINSPTGSGKTLSY 86
L + K LQ +GI+ LF VQ AV + R D+C+++PTGSGKTL+Y
Sbjct: 189 LSEKTKKRLQELGITELFAVQTAVIPFLMSDQKQRRLYLHDPPHDICVSAPTGSGKTLAY 248
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
LPIV+ LS+R + LRAL+VLPTRDL
Sbjct: 249 VLPIVELLSSRVITRLRALIVLPTRDL--------------------------------- 275
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
+ QV++ F A+A L +G A GQ S A E S+L+ L LQ
Sbjct: 276 ------VTQVRETFEALAKGRSLKIGTATGQHSFAHEQSQLVADRTLR----------LQ 319
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
S +DIL+ TPGRL+DH+N T F+L+HL +LV+DE D+LL +++Q WL VL TR
Sbjct: 320 GGSSKIDILICTPGRLIDHLNGTPNFSLQHLRFLVIDEADKLLAQSFQDWLARVLSATRP 379
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCG------------VERGFKDKPYPRLVKMVLSAT 314
D + + S+ S+ T V F + K++ SAT
Sbjct: 380 SEIPTSPDLVSGVASSTDSIPTPDGLAPAFLHIFHGIPHVRTDFDEPKETSCQKLLFSAT 439
Query: 315 LTQDPNKLAQLDLHHP-LFLTTGETR----------------YKLPERLESYKLICESKL 357
LT+DP+K+A L+L P F+ G +R + +P L + ++CES
Sbjct: 440 LTRDPSKIAALNLRDPKYFVVQGSSREIATQQEGVLDLVMEKFNMPATLLEHMIVCESSQ 499
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE----------YSGL 407
KPL L L+ + G + +VFT S EST RL L F RI E YS
Sbjct: 500 KPLVLFHLVHTHGVKNALVFTKSAESTARLVKLFEFFELSRISSTEQQGSAIVLSAYSSD 559
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
S R + L F+ + +LV SD ++RG+D+ V++VV+YD P ++ Y+HR GRTAR
Sbjct: 560 LAPSARKEILDKFKNQETHILVCSDLISRGIDISHVSHVVSYDAPVDMRKYVHRVGRTAR 619
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKADN 495
AG+ G +TL+ + E + FK +L++A++
Sbjct: 620 AGRTGDAWTLIEEQEARHFKNMLKEANH 647
>gi|213511024|ref|NP_001133236.1| ATP-dependent RNA helicase DDX51 [Salmo salar]
gi|209147204|gb|ACI32879.1| ATP-dependent RNA helicase DDX51 [Salmo salar]
Length = 678
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 273/538 (50%), Gaps = 93/538 (17%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ- 60
+K VLP W+ P + + + P+ +P + +L+ L++ GI LFPVQ V
Sbjct: 188 QKVQRVLPKWLAEPDVIQRDITSNLVPISDVPGICTKLQRKLESNGIHHLFPVQAEVIPA 247
Query: 61 --ETIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
E++ GL RD+C+++PTGSGKTL++ +P++Q L R V +R L VLPT+
Sbjct: 248 ILESVSHGLLIGRGGYKPRDVCVSAPTGSGKTLAFVIPVIQALIGRVVCKVRVLAVLPTK 307
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV CK VF++ A L V
Sbjct: 308 ELAQQV--------CK-------------------------------VFSSYAEGNSLKV 328
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ GQ S A E + L + GI + S DI+VATPGRL+DHIN G
Sbjct: 329 VMLAGQKSFAAEQALLSEN---RGGISH----------SLADIVVATPGRLVDHINKNDG 375
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+LEHL +L++DE DR++ +Q+WL V + R S+A + K
Sbjct: 376 FSLEHLRFLIIDEADRMIDSMHQSWLSQVTKAVY--RPRRVSEAVSIF-------KRTEP 426
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------GETRYK 341
+ P L K++ SATLTQ+P KL QL LH P ++ + R+
Sbjct: 427 APITAASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSVHSQSTTNPESQERFN 486
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
P+ L Y + C KPL ++ + L + FT+S E+THRL L+ FG ++
Sbjct: 487 FPQGLTEYYVPCTLSKKPLLILHFILRLKFSPILCFTNSREATHRLFLLVQLFGG--VQA 544
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E+S + R +TLK F +GKIQ+L+S+DA RG+D+ GV VVNYD P +I+TYIHR
Sbjct: 545 AEFSSRLSPNERMRTLKEFEQGKIQLLISTDAAARGIDINGVKCVVNYDAPQFIRTYIHR 604
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS---IPSSLIESLRPVYK 516
GRTARAG+ G FT L + K+F ++++ D S IH +P +L +S+ P Y+
Sbjct: 605 VGRTARAGKSGLAFTFLLGVQEKKFLQMVK--DAGSPGIHKQIVMPGNL-KSMEPRYE 659
>gi|443730193|gb|ELU15819.1| hypothetical protein CAPTEDRAFT_183322 [Capitella teleta]
Length = 576
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 248/531 (46%), Gaps = 92/531 (17%)
Query: 5 KKKSMPVLP-WMRSPVDVS---LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
++K VLP W+ +S E CPL LD RL L+ G+ FPVQ +
Sbjct: 86 QEKVSRVLPDWLTKTTSISSDIKSERCPLAETADLDERLITLLEKNGVKDFFPVQARLIP 145
Query: 61 ETIGP------------GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
T+ G DLC ++ TGSGKTL+Y +PIVQ LS R V +RALVVL
Sbjct: 146 ATMNSFDKQFPYALTKGGFRPSDLCCSAATGSGKTLAYVVPIVQALSRRVVPAIRALVVL 205
Query: 109 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 168
P RDLA QV C YC
Sbjct: 206 PVRDLAQQVYKVFCTYCA---------------------------------------GTN 226
Query: 169 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 228
L V L G S +E ++ P + DI++ TPGRL+DH+
Sbjct: 227 LKVVLTAGYKSFENEQQQMTFGP--------------NGTKCPADIVITTPGRLVDHLIE 272
Query: 229 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 288
T+GF L L +LV+DE DRL++E W VL++ + + + + T G +
Sbjct: 273 TKGFCLNELRFLVIDEADRLMKEFKFDW---VLKVENAVYHHTYDTSVTS-----GHRFS 324
Query: 289 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE----------- 337
C G+ D P+ L K++ SATL+Q+P L Q+ L P T E
Sbjct: 325 PNLCSAA-GYDDYPHVGLQKLLFSATLSQNPEVLQQMRLFQPRLFTASEGTDESSQMESI 383
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+Y P L + CE KPL L L+ + + + FT+SV+STHRLCTLL G
Sbjct: 384 NKYVTPASLNEMFIKCEENTKPLVLFHLIHTRKYRQVLCFTNSVKSTHRLCTLLRLMG-- 441
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
++ ++E S + R KTLK F GKI+++V SD M RGMD+E V++YD P +I+
Sbjct: 442 KVSVEELSSHISINKRQKTLKKFAAGKIEIVVCSDQMARGMDIENAKCVISYDVPNFIQN 501
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI-PSSL 507
Y+HR GRTAR G G TLL +VK FK++L KA ++ PS L
Sbjct: 502 YVHRVGRTARGGHAGSAITLLDHSQVKFFKEMLHKAGKSDFKTETVKPSEL 552
>gi|336383556|gb|EGO24705.1| hypothetical protein SERLADRAFT_369949 [Serpula lacrymans var.
lacrymans S7.9]
Length = 651
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 177/503 (35%), Positives = 251/503 (49%), Gaps = 95/503 (18%)
Query: 38 RLKVALQNMGISSLFPVQVAVW-----QETIGPGLFE-----RDLCINSPTGSGKTLSYA 87
+++ L+ +GI+ LF VQ + ++ GL+ RD+C+++PTGSGKTL+Y
Sbjct: 179 KMRRRLKELGITELFAVQTRLLPFLLPRDARKRGLYAPYAPPRDVCVSAPTGSGKTLAYV 238
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
LPIV+TLS+R + LRALVVLPTRDL +QV
Sbjct: 239 LPIVETLSSRIITRLRALVVLPTRDLVMQV------------------------------ 268
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
++ F + GL VG A GQ S A E S+LI D L
Sbjct: 269 ---------RETFEEVGKGRGLKVGTATGQHSFAHEQSQLIA----------DRSSGLLG 309
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR-- 265
S +DIL+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q W+ V+ TR
Sbjct: 310 GSSKIDILICTPGRLVDHMNGTPNFSLQHLRFLVIDEADRLLAQSFQDWVARVVTATRPT 369
Query: 266 ---------SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD-KPYPRLVKMVLSATL 315
++ E F A P + I G+ D KP K++ SATL
Sbjct: 370 TFPSSGTPRAEEEETFGCADGLAPPLLHAKYAIANT---YGYMDEKPSSSCQKLLFSATL 426
Query: 316 TQDPNKLAQLDLHHPLFLTTGETR--------------YKLPERLESYKLICESKLKPLY 361
+DP KLA L L + + R Y +P L + ++C S KPL
Sbjct: 427 PRDPGKLAGLQLRDVKYFVVQKARGGREEGVLDVVMERYTMPATLREHMIVCASSEKPLV 486
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-------GELRIKIKEYSGLQRQSVRS 414
L L+Q +VFT S EST RL L F G L + K YS R
Sbjct: 487 LFDLVQRHKVRNGLVFTKSAESTARLVRLFELFEKAVAGEGRLGVVAKAYSSDLSVGERR 546
Query: 415 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 474
L+ F+ +IQ+LV SD ++RGMD+ V++VV+YD P ++ Y+HR GRTARAG+ G
Sbjct: 547 GILEKFKAEEIQILVCSDLISRGMDMSHVSHVVSYDVPVDMRKYVHRVGRTARAGREGDA 606
Query: 475 FTLLHKDEVKRFKKLLQKADNDS 497
+TL+ + E + FK++L +AD+ S
Sbjct: 607 WTLVEEQEARYFKRMLSEADHIS 629
>gi|343426780|emb|CBQ70308.1| related to DBP6-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 852
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 174/510 (34%), Positives = 258/510 (50%), Gaps = 97/510 (19%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTL 84
L ++ L+ +G+S F VQV+V + P RDLC+++PTGSGKTL
Sbjct: 333 ALSDTVRSRLEALGVSEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTL 392
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQ 144
+Y++PIV+ L R + LRAL+VLPTRDL
Sbjct: 393 AYSVPIVEVLRTRQIVRLRALIVLPTRDL------------------------------- 421
Query: 145 FDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 204
+ QV+ +A GL +G A GQ S A E ++L+ + D ED
Sbjct: 422 --------VSQVRSTLELLAKGSGLRIGTATGQHSFAHEQNQLVG----TSSSDEDEEDA 469
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 264
+L+S VDILVATPGRL+DH+++T GFTL HL +LV+DE DRLL +++Q WL VL T
Sbjct: 470 --QLESKVDILVATPGRLIDHLDSTPGFTLAHLRFLVIDEADRLLNQSFQEWLRRVLAAT 527
Query: 265 RSDNENRFSDASTFLPSAFGSLKTIRRCGV----ERGFKDKPYPRLVKMVLSATLTQDPN 320
+ S A L T G+ + +++ P + K++ SATLT+DP
Sbjct: 528 EGTANSDVHSQSRGSAQAPYELLTSSASGLGAATQSTLQEEAVPSVQKLLFSATLTRDPA 587
Query: 321 KLAQLDLHHPLFLTTGET------------------RYKLPERLESYKLICESKLKPLYL 362
K+A L L +P ++T +T R+ LP L + L+ S KP +L
Sbjct: 588 KIAALGLRNPHYITVQDTHSAGDDENGRVNGAQQHERFSLPHSLREHMLVTTSADKPFHL 647
Query: 363 VALLQSLGEE---------KCIVFTSSVESTHRLCTLLNHFGELRIK------------I 401
+ LL ++ K + FT SV+S RL L+ F ++R + +
Sbjct: 648 LYLLHRPDQDVDNNDSRIRKALCFTKSVDSAARLVKLIEIFEQVRSENGLVSRGSRPLVV 707
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
K YS + S R + L AF +G+I +LV SD ++RG+D+ V +VV+YD P Y+HR
Sbjct: 708 KNYSSELKPSDRQRILAAFAQGEIDLLVCSDLISRGIDLPSVEHVVSYDAPIDPAKYVHR 767
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
GRTARAG+ G +TL+ + E + FKK+++
Sbjct: 768 VGRTARAGKHGDAWTLVEEQEARHFKKMIR 797
>gi|402224982|gb|EJU05044.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 540
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 263/512 (51%), Gaps = 114/512 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI-GP----GLFE-----RDLCINSPTGSGKTL 84
L+ RL+ L+ +G+ +LF VQ A+W + GP GL+E RD+C+++PTGSGKTL
Sbjct: 57 LNERLQRRLEALGVDNLFAVQAALWPWLLTGPEARRGLYEPRRAPRDVCVSAPTGSGKTL 116
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQ 144
+YA+PIV+ LS R V LR+LV+LPTRDL VQ
Sbjct: 117 AYAVPIVEILSVRVVTRLRSLVILPTRDL-----------------------------VQ 147
Query: 145 FDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 204
QVK+ F A+ GL VG A G S A E L++ D E
Sbjct: 148 ----------QVKETFEALCKGTGLKVGSATGAQSWAKEQKALVE----------DLETK 187
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ-L 263
LQ S +DILV TPGRL+DH++ T F+L+HL +LV+DE DRLL +++Q++LP +L L
Sbjct: 188 LQGGSSNIDILVCTPGRLIDHLDDTPNFSLQHLRFLVIDEADRLLSQSFQSFLPRLLTAL 247
Query: 264 TRSDNE----------NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
T + + + S A LP FG + C K++ SA
Sbjct: 248 TPTPHPVPPSSDLLIPDALSPAWLDLPHEFGWAPMLPSCQ--------------KLLFSA 293
Query: 314 TLTQDPNKLAQLDLHHP-LFLTT----GE-------TRYKLPERLESYKLICESKLKPLY 361
T+T+DP L L L +P F+ T GE + +P+ L Y L+ + LKPLY
Sbjct: 294 TMTRDPGVLKSLGLRNPKYFIVTAAPEGERDEAIIREEFSVPDTLSEYLLVVPTDLKPLY 353
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF------------------GELRIKIKE 403
L LL + +VFT S EST RL L F G +I +
Sbjct: 354 LFHLLHTHPITNALVFTKSTESTTRLLKLFEFFESARLSVSTSVSASAQDGGSPQILARA 413
Query: 404 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 463
+S + R L F++G+I+VLV+SD ++RG+D+ V++VVNYD P ++ Y+HRAG
Sbjct: 414 FSSELGKGERKSILDQFKQGRIRVLVASDLVSRGIDIPDVSHVVNYDSPLDMRKYVHRAG 473
Query: 464 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
RTARAG+ G ++L+ E + +++L+ A +
Sbjct: 474 RTARAGREGEVWSLVESQEARWVREMLKAAGH 505
>gi|390348197|ref|XP_797208.3| PREDICTED: uncharacterized protein LOC592601 [Strongylocentrotus
purpuratus]
Length = 997
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 255/517 (49%), Gaps = 107/517 (20%)
Query: 14 WMRSP--VDVSLFEDC-PLDHLPCLDPRLKVALQNMGISSLFPVQ---VAVWQETIGPGL 67
W+ P + SL D P++ + LD RL AL MG+ FPVQ + V E++ G+
Sbjct: 314 WLARPSVIQQSLTNDLQPVNSIKGLDERLVTALAYMGVEKFFPVQQHVIPVLLESLRDGI 373
Query: 68 FE-------RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
RDLCI++PTGSGKTL+YA+PI+Q L NR V +RALVVLPTRDLA QV
Sbjct: 374 HTGHAGYRPRDLCISAPTGSGKTLAYAIPIIQALMNRVVCRVRALVVLPTRDLATQVYK- 432
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+ +A+ A L L G
Sbjct: 433 --------------------------------------IISALCKATPLKPVLIGGTKKF 454
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
A E S L++ ++ EL S DI+VATPGRL+D+I+ T GF L+HL +L
Sbjct: 455 AQEQSLLVR-------------EIDGELHSLADIVVATPGRLVDNISQTAGFNLQHLRFL 501
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DRL+ Q W+ V + + D T LP+ + + + R
Sbjct: 502 VIDEADRLMEHISQDWIAQVEKSAYTP----LYDNGTTLPTFTSNRQRPGPLTINRSSSF 557
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET---------------------- 338
+ P L K++ SATL+Q+P KL QL L P +TT +
Sbjct: 558 Q-LP-LQKLLFSATLSQNPEKLTQLRLFQPRLITTATSSRAPPISAWHLDGEKEGVKEEG 615
Query: 339 ------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+Y P L Y + C + KPL L L +L ++ + FT+SV++THR
Sbjct: 616 KEKDEGRTDFVGKYTTPVGLSEYFVQCTAGEKPLVLQHFLLNLYFKQVLCFTNSVQTTHR 675
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LL G+ +++ E+S QS R LK F+ GKIQ+LV SDAM RGMD+E V V
Sbjct: 676 LYLLLKLMGD--VEVSEFSSNLSQSERQNILKQFKAGKIQILVCSDAMARGMDIENVRCV 733
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
++YD P ++KTYIHR GRTARAG+ G F+ + K E
Sbjct: 734 ISYDLPPHLKTYIHRVGRTARAGRGGTAFSFIRKKEA 770
>gi|348537210|ref|XP_003456088.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Oreochromis
niloticus]
Length = 621
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 240/488 (49%), Gaps = 89/488 (18%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQET---------IGPGLFE-RDLCINSPTGSG 81
+P L +L L + GI FPVQ V IG G ++ RD+C+++PTGSG
Sbjct: 162 VPGLCAQLLKNLHSNGIQHFFPVQAEVIPAILESAQQGLLIGRGGYKPRDICVSAPTGSG 221
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
KTLS+ +PI+Q L +R V +RAL VLPT++LA QV+
Sbjct: 222 KTLSFVIPIIQVLMDRVVCEVRALAVLPTKELAQQVHR---------------------- 259
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 201
VFA+ A L V + GQ S A E + L
Sbjct: 260 -----------------VFASYAEGTSLKVVMLAGQKSFAAEQASL-------------S 289
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
E +S DI+VATPGRL+DH+ G LEHL +LV+DE DR++ +Q+WL V+
Sbjct: 290 EHRWNMRRSLADIVVATPGRLIDHMTKNSGLCLEHLRFLVIDEADRMIDSMHQSWLSQVM 349
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
+R S F +T C + P L K++ SATLTQ+P K
Sbjct: 350 GAV---YRSRAEPGSVFR-------RTEAAC-ITSASLSPPQTPLQKLLFSATLTQNPEK 398
Query: 322 LAQLDLHHPLFL--------------TTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
L QL LH P T G R+ P+ L Y + C KPL L+ +
Sbjct: 399 LQQLGLHQPRLFSSAHGQADSTAASPTHGHDRFNFPQGLTEYYVPCTMSSKPLLLLHFIL 458
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
+ + FT+S E+ HRL LL FG ++ E+S R KTLK F +GKIQ+
Sbjct: 459 RMKLHPILCFTNSRETAHRLHLLLQLFGG--VQAAEFSSQLSPGDRKKTLKEFEQGKIQL 516
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
L+S+DA+ RG+D+ GV VVNYD P YI+TYIHR GRTARAG+ G FT L + + K F
Sbjct: 517 LISTDAVARGIDISGVKCVVNYDAPQYIRTYIHRVGRTARAGKTGLAFTFLLRVQEKNFL 576
Query: 488 KLLQKADN 495
+++ KA +
Sbjct: 577 QMVVKAGS 584
>gi|58264962|ref|XP_569637.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109595|ref|XP_776912.1| hypothetical protein CNBC4030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259592|gb|EAL22265.1| hypothetical protein CNBC4030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225869|gb|AAW42330.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 701
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 250/487 (51%), Gaps = 87/487 (17%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLC------INSPTGSGKTLSYALPIVQTLSN 96
L +GI F VQ A+ + L C I++PTGSGKTL+Y +PI++ LS
Sbjct: 233 LNEIGIEDFFAVQAAMLPRLLPLQLIPSPYCPLPDYLISAPTGSGKTLAYTIPILEILSQ 292
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R + LRAL+VLPTRDL QV
Sbjct: 293 RTICRLRALIVLPTRDLVFQV--------------------------------------- 313
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
++ A++ GL++G GQ S A E +L+ D + L S +DIL+
Sbjct: 314 RETMEALSKGTGLTIGTVTGQHSFAQERKQLVA----------DLDTPLLGGSSKLDILI 363
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ +T FTL+HL +LV+DE DRLL +++Q WL VL TR E A
Sbjct: 364 ATPGRLMDHLASTPNFTLQHLRFLVIDEADRLLNQSFQDWLTQVLAYTRPPVE---PIAP 420
Query: 277 TFLPSAFGSLKT--IRRCGV--ERGFKDKPYPRLV-KMVLSATLTQDPNKLAQLDLHHPL 331
+F + ++ + + CG+ +RG P + K++ SATLT+DP+K+A L LHHP
Sbjct: 421 SFKRKPYDTVSSAFMEACGLVDKRGEWCDSSPSICQKLLFSATLTRDPSKVAALSLHHPQ 480
Query: 332 FL------------TTGETRYKLPERLESYKLICESKLKPLYLVALLQ--SLGEEKCIVF 377
+ + GE ++ LP L LI LKPL L+ L+ ++ +VF
Sbjct: 481 YYIVQSSSVPALPTSVGE-QFALPSSLSEKMLILPPALKPLNLIHLIHHSEFNVDRALVF 539
Query: 378 TSSVESTHRLCTLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
T SVES RL LL F G R+ +++YSG R + + L F EGK+ ++
Sbjct: 540 TKSVESAARLVKLLEFFEDAYVLGGGGGKRLVVEQYSGETRAKDKKQLLAEFGEGKVNLI 599
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
V SD + RG+D+ V++VV+YD P I+ Y+HR GRTARAG+ G +TL+ K E FK
Sbjct: 600 VCSDLIARGIDLPSVSHVVSYDIPLDIRKYVHRVGRTARAGRQGTAWTLVEKQEALHFKG 659
Query: 489 LLQKADN 495
+LQ A +
Sbjct: 660 MLQNAGH 666
>gi|219122463|ref|XP_002181564.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406840|gb|EEC46778.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 453
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 252/488 (51%), Gaps = 86/488 (17%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPG----LFERDLCINSPTGSGKTLSYALPIVQ 92
P L L+ G ++ FP+Q + I + RD+CI +PTGSGKTL+Y LP++
Sbjct: 17 PFLTNNLKRDGFANFFPIQALAIPDVIASERHAYIQARDVCITAPTGSGKTLAYVLPVLN 76
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+L+NR +R LRALVVLP+RDLA
Sbjct: 77 SLANRKIRRLRALVVLPSRDLA-------------------------------------- 98
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD-PEDVLQELQSA 211
QV VF + L VGLA+GQS E ++ E G +D PE ++ QS
Sbjct: 99 -NQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAILALQAFEDGNDHDLPEK--RDPQST 155
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
+D+LV TPGRL+DH++ T GF+LEHL +L+VDE DRLL + Y W+ V+Q S
Sbjct: 156 IDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVIQSANSGRGGV 215
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL------ 325
D + F + S +++ +P +L K ++SATLT+DP KLA L
Sbjct: 216 VGDDTDF--NTNDSYRSVASSVC------RPV-QLRKFLVSATLTRDPQKLASLKLVNPK 266
Query: 326 --DLH-----HPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL---------QSL 369
D+H H F T +Y +PE L + + C ++ KP+ L+AL+ QS
Sbjct: 267 HFDVHQLRTGHQGFFNTNTKKYSMPEGLHEHTVECTAEQKPIVLLALVLDQLTPQQSQSS 326
Query: 370 GEEKCIVFTSSVESTHRLCTLLN------HFGELRIKIKEYSGLQRQSVRSKTLKAFR-- 421
++ IVFT+S++STHRL LL +GE + E+S Q RS +K
Sbjct: 327 SKQSVIVFTASLDSTHRLARLLQLLWVSAGYGEPD-SVVEFSSALNQHERSALMKRCNDP 385
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
+ K+ V+V SD M+RGMD++ V V+NYD P KTY+HR GRTARAG+ G +LL
Sbjct: 386 QDKVSVVVCSDGMSRGMDIDAVRAVINYDVPGLAKTYVHRCGRTARAGKEGHAISLLKGG 445
Query: 482 EVKRFKKL 489
+ ++F K+
Sbjct: 446 QTRQFDKM 453
>gi|392594884|gb|EIW84208.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 620
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 248/491 (50%), Gaps = 91/491 (18%)
Query: 43 LQNMGISSLFPVQVAVWQ----ETIG------PGLFERDLCINSPTGSGKTLSYALPIVQ 92
L ++GI+ LF VQ A+ ET P RD+C+++PTGSGKTL+Y LPIV+
Sbjct: 149 LGDLGITELFAVQTALLPFLLPETHSQRALYVPYEPLRDVCVSAPTGSGKTLAYVLPIVE 208
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
LS R V LRAL+VLPTRDL
Sbjct: 209 ILSTRIVTRLRALIVLPTRDL--------------------------------------- 229
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
+ QV++ F ++ GL G A GQ S + E S+L+ D L+ S V
Sbjct: 230 VTQVRETFEVVSKGRGLKTGTATGQHSFSHEQSQLVA----------DSSTSLRGGSSKV 279
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
DIL+ TPGRL+DHIN T F+L+HL +LV+DE DRLL +++Q WL VL T +
Sbjct: 280 DILICTPGRLIDHINGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQVLAATLPPDHA-- 337
Query: 273 SDASTF------LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
A TF LP+ G T + ++ K++ SATLT+DP KLA L
Sbjct: 338 GAAYTFPTDRYGLPTPDGLAPTFVHH-FQTDIDEEKESSCQKLLFSATLTRDPGKLAALK 396
Query: 327 LHHPLFLTT------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 374
L P + GE ++ +P L+ + +ICE KPL L LLQ+ +
Sbjct: 397 LRDPKYFVVQAKEKLDGNDYVGE-QFTMPATLKEHMIICEPSQKPLMLFYLLQNRSVDNA 455
Query: 375 IVFTSSVESTHRLCTLLNHFGELR----------IKIKEYSGLQRQSVRSKTLKAFREGK 424
++FT S EST RL L HF + + I+ YS R + L+ F+ +
Sbjct: 456 LIFTKSSESTSRLVRLFEHFATFKQSGAASEDDKLVIQAYSSDLPAGERKRILEKFKAKE 515
Query: 425 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
+ +LV SD ++RG+D+ V +VV+YD P ++ Y+HR GRTARAG+ G +TL+ + E +
Sbjct: 516 VHLLVCSDLVSRGIDISHVAHVVSYDAPVDMRKYVHRVGRTARAGREGHAWTLVEEQEAR 575
Query: 485 RFKKLLQKADN 495
FK +L+ AD+
Sbjct: 576 YFKTMLKTADH 586
>gi|443895519|dbj|GAC72865.1| protein kinase [Pseudozyma antarctica T-34]
Length = 860
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 174/502 (34%), Positives = 258/502 (51%), Gaps = 102/502 (20%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +G+S F VQV+V + P RDLC+++PTGSGKTL+Y +PIV+
Sbjct: 353 LEALGVSEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYTVPIVEV 412
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L R + LRAL+VLPTRDL +
Sbjct: 413 LRTRQIVRLRALIVLPTRDL---------------------------------------V 433
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV+ +A GL + A G S A E ++L++ G+ D +D + QS VD
Sbjct: 434 SQVRSTLELVAKGSGLRIATATGHHSFAHEQTQLVE------GLDADDDDDSVQKQSKVD 487
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR--SDNENR 271
IL+ATPGRL+DH+++T GFTL HL +LV+DE DRLL +++Q WL VL T ++ ++R
Sbjct: 488 ILIATPGRLIDHLDSTPGFTLAHLRFLVIDEADRLLNQSFQEWLRRVLSATEGVANADSR 547
Query: 272 FSDAS------TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
++A+ L SA R ++ ++ P + K++ SATLT+DP K+A L
Sbjct: 548 CTEATPAQAPYELLSSASSGFGAAARSTLQ----EEAVPSVQKLLFSATLTRDPAKIAAL 603
Query: 326 DLHHPLFLTT--------GET---------RYKLPERLESYKLICESKLKPLYLVALLQS 368
L +P ++T GE+ R+ LP L + L+ S KP +L+ LL
Sbjct: 604 GLRNPHYITVQDDNPAADGESGLAERAQHERFSLPHSLHEHMLVTTSADKPFHLLYLLHR 663
Query: 369 LGEE-------KCIVFTSSVESTHRLCTLLNHFGELR------------IKIKEYSGLQR 409
+E K + FT SVES RL L+ F E+R + +K YS R
Sbjct: 664 PDDEQAAAKIRKALCFTKSVESAARLVKLVEMFEEVRQESGLIARGARPMVVKNYSSELR 723
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
S R + L F G+I +LV SD ++RG+D+ V +V++YD P Y+HR GRTARAG
Sbjct: 724 PSDRQRILAQFGNGEIDLLVCSDLISRGIDLPSVEHVISYDAPVDSAKYVHRVGRTARAG 783
Query: 470 QLGRCFTLLHKDEVKRFKKLLQ 491
+ G +TL+ + E + FKK+++
Sbjct: 784 KHGDAWTLVEEQEARHFKKMVR 805
>gi|71004804|ref|XP_757068.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
gi|46096872|gb|EAK82105.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
Length = 870
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 255/503 (50%), Gaps = 98/503 (19%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +GIS F VQV+V + P RDLC+++PTGSGKTL+Y++PIV+
Sbjct: 358 LEALGISEWFAVQVSVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYSVPIVEV 417
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L R + LRAL+VLPTRDL +
Sbjct: 418 LRTRQIVRLRALIVLPTRDL---------------------------------------V 438
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV+ +A GL +G A GQ S A E ++L+ + + D ++ E + +D
Sbjct: 439 SQVRSTLELVAKGSGLRIGTATGQHSFAHEQNQLVGS---SSAVDQDQDEAQSEPK--ID 493
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT--RSDNENR 271
IL+ATPGRL+DH+++T GF L HL +LVVDE DRLL +++Q WL VL T ++D R
Sbjct: 494 ILIATPGRLIDHLDSTPGFNLAHLRFLVVDEADRLLNQSFQEWLRRVLAATNGKTDQAER 553
Query: 272 FSDASTFLPSA-----FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
+ P+ F S + +++ P + K++ SATLT+DP K+A L
Sbjct: 554 ERASQKSGPAQAPFELFSSSASGLGAAATSTLQEEAAPSVQKLLFSATLTRDPAKIAALG 613
Query: 327 LHHPLFLTTGET------------------RYKLPERLESYKLICESKLKPLYLVALLQ- 367
L +P ++T +T ++ LP L + L+ S KP +L+ LL
Sbjct: 614 LRNPHYITVQDTNSAGDEDQGRANGVQQHEQFSLPHSLHEHMLVTTSADKPFHLLYLLHR 673
Query: 368 ------SLGE-EKCIVFTSSVESTHRLCTLLNHFGELRIK------------IKEYSGLQ 408
LG K + FT SV+S RL LL F E+R++ +K YS
Sbjct: 674 PDDVNNELGRIRKALCFTKSVDSAARLVKLLEIFEEVRVENSLIARGSRALVVKNYSSEL 733
Query: 409 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 468
+ S R + L AF +G+I +LV SD ++RG+D+ V +V++YD P Y+HR GRTARA
Sbjct: 734 KPSDRQRILSAFEKGEIDLLVCSDLISRGIDLPSVEHVISYDAPIDPAKYVHRVGRTARA 793
Query: 469 GQLGRCFTLLHKDEVKRFKKLLQ 491
G+ G +TL+ + E + FKK ++
Sbjct: 794 GKHGDAWTLVEEQEARHFKKTVR 816
>gi|405123262|gb|AFR98027.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. grubii
H99]
Length = 718
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 87/494 (17%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYA 87
L ++ L +G+ F VQ A+ + L D I++PTGSGKTL+Y
Sbjct: 241 ALSVNMRRRLNEIGVEDFFAVQAAMLPRLLPLQLIPSPYSPLPDYLISAPTGSGKTLAYT 300
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
+PI++ LS R V LRAL++LPTRDL QV
Sbjct: 301 IPIIEILSQRTVCRLRALIILPTRDLVFQV------------------------------ 330
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
++ A++ GL++G GQ S A E +L+ D + L
Sbjct: 331 ---------RETMEALSKGTGLTIGTVTGQHSFAQERKQLVA----------DLDTPLLG 371
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
S +DIL+ATPGRLMDH+ +T FTL+HL +LV+DE DRLL +++Q WL VL TR
Sbjct: 372 GSSKLDILIATPGRLMDHLASTPNFTLQHLRFLVIDEADRLLNQSFQDWLTQVLAYTRPP 431
Query: 268 NENRFSDASTFLPSAFGSLKT--IRRCGVERGFKD--KPYPRLV-KMVLSATLTQDPNKL 322
E A +F + ++ + + CG+ ++ P + K++ SATLT+DP+K+
Sbjct: 432 VE---PIAPSFKRKPYDTVSSAFMEACGLVNKSEEWCDSSPSICQKLLFSATLTRDPSKV 488
Query: 323 AQLDLHHPLFL------------TTGETRYKLPERLESYKLICESKLKPLYLVALLQ--S 368
A L LHHP + + GE ++ LP L LI LKPL L+ L+
Sbjct: 489 AALSLHHPQYYIVQSSSAPALPTSVGE-QFALPSSLSEKMLILPPALKPLNLIHLIHHPE 547
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKA 419
++ +VFT SVES RL LL F G R+ I++YSG R + + L
Sbjct: 548 FNVDRALVFTKSVESAARLVKLLEFFEDAYVLGGGGGKRLVIEQYSGEMRARDKKQLLAE 607
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F EGKI ++V SD + RG+D+ V++VV+YD P I+ Y+HR GRTARAG+ G +TL+
Sbjct: 608 FGEGKINLIVCSDLIARGIDLPSVSHVVSYDIPLDIRKYVHRVGRTARAGRQGTAWTLVE 667
Query: 480 KDEVKRFKKLLQKA 493
K E FK +LQ A
Sbjct: 668 KQEALHFKGMLQNA 681
>gi|321253768|ref|XP_003192843.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317459312|gb|ADV21056.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 702
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 249/495 (50%), Gaps = 103/495 (20%)
Query: 43 LQNMGISSLFPVQVAVW------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
L+++G+ F VQ A+ Q P D I++PTGSGKTL+YA+PI++ LS
Sbjct: 234 LKDIGVEDFFAVQAAMLPRLLPLQLIPSPYSSLPDYLISAPTGSGKTLAYAIPIIEILSQ 293
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R V LRAL+VLPTRDL QV
Sbjct: 294 RTVCRLRALIVLPTRDLVFQV--------------------------------------- 314
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
++ A++ GL++G GQ S A E +L+ D E L S +DIL+
Sbjct: 315 RETMEALSKGTGLTIGTVTGQHSFAQERKQLVA----------DLETPLLGGSSKLDILI 364
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ +T FTL+HL +LV+DE DRLL +++Q WL VL TR E
Sbjct: 365 ATPGRLMDHLASTPNFTLQHLRFLVIDEADRLLNQSFQNWLTQVLAYTRPPIEP------ 418
Query: 277 TFLPSAFGSLKTIRRCGVERGF--------KDKPY----PRLV-KMVLSATLTQDPNKLA 323
+P +F K V F KD + P + K++ SATLT+DP+K+A
Sbjct: 419 --IPPSF---KRKPHDTVSSAFMEACSLIDKDGEWCDSSPSICQKLLFSATLTRDPSKIA 473
Query: 324 QLDLHHPLFL------------TTGETRYKLPERLESYKLICESKLKPLYLVALLQ--SL 369
L LHHP + + GE ++ LP L LI LKPL L+ L+
Sbjct: 474 ALSLHHPQYYIVQSSIAPALPTSVGE-QFALPSSLSEKMLIVPPALKPLNLIHLVHHSEF 532
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHF---------GELRIKIKEYSGLQRQSVRSKTLKAF 420
++ +VFT SVES RL LL F G R+ +++YSG + + + L F
Sbjct: 533 NVDRALVFTKSVESAARLVKLLEFFEDAYVLGGGGGKRLAVEQYSGEMKARDKKQLLAEF 592
Query: 421 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
EGK+ ++V SD + RG+D+ V++VV+YD P I+ Y+HR GRTARAG+ G +TL+ K
Sbjct: 593 GEGKVNLIVCSDLIARGIDLPSVSHVVSYDIPLDIRKYVHRVGRTARAGRQGTAWTLVEK 652
Query: 481 DEVKRFKKLLQKADN 495
E FK +LQ A +
Sbjct: 653 QEALHFKGMLQNAGH 667
>gi|388851453|emb|CCF54855.1| related to DBP6-ATP-dependent RNA helicase [Ustilago hordei]
Length = 869
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 252/501 (50%), Gaps = 95/501 (18%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ +G+S F VQ++V + P RDLC+++PTGSGKTL+Y +PIV+
Sbjct: 355 LEALGVSEWFAVQISVIPCLLAQPQSRSLYRPFAPPRDLCVSAPTGSGKTLAYTVPIVEV 414
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L R + LRAL+VLPTRDL +
Sbjct: 415 LRTRQIVRLRALIVLPTRDL---------------------------------------V 435
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV+ +A GL +G A GQ S A E S+L+ L G Y+ ++ L+E S VD
Sbjct: 436 SQVRSTLELVAKGSGLRIGTATGQHSFAHEQSQLVW--SLSVGDDYEEQNALKE--SKVD 491
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF- 272
+L+ATPGRL+DH+++T GFTL HL +LV+DE DRLL +++Q WL VL T +
Sbjct: 492 VLIATPGRLIDHLDSTPGFTLAHLRFLVIDEADRLLNQSFQEWLRRVLAATEGKGTDAVP 551
Query: 273 ---SDASTFLPSAFGSLKTIRRCGVE-RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 328
+A+ P S G +++ P + K++ SATLT DP K+A L L
Sbjct: 552 QWKGEAAAQAPHELLSGNASGLGGAAWSTLQEEAVPSVQKLLFSATLTSDPAKIAALGLR 611
Query: 329 HPLFLTTGET------------------RYKLPERLESYKLICESKLKPLYLVALLQSLG 370
+P ++T ++ R+ LP L + L+ S KP +L+ LL
Sbjct: 612 NPHYITVQDSHSAGDEEDGRSNGSQQHERFSLPHSLHEHMLVTTSADKPFHLLYLLHRPD 671
Query: 371 E--------EKCIVFTSSVESTHRLCTLLNHFGELRIK------------IKEYSGLQRQ 410
+ K + FT SV+S RL L+ F ++R + +K YS +
Sbjct: 672 DVEQNSSRIRKALCFTKSVDSAARLVKLIEIFEQVRSESGLIQRGSRPFVVKNYSSELKP 731
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
S R + L F +G+I +LV SD ++RG+D+ V +VV+YD P Y+HR GRTARAG+
Sbjct: 732 SERQRILTQFGQGEIDLLVCSDLISRGIDLPTVEHVVSYDAPIDPAKYVHRVGRTARAGK 791
Query: 471 LGRCFTLLHKDEVKRFKKLLQ 491
G +TL+ + E + FKK+++
Sbjct: 792 HGDAWTLVEEQEARHFKKMVR 812
>gi|410914978|ref|XP_003970964.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Takifugu
rubripes]
Length = 596
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 257/535 (48%), Gaps = 94/535 (17%)
Query: 11 VLP-WMRSPVDVSLFED-----CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET-- 62
VLP W+ P DV + +D P+ + L P+ L + GI FPVQ V
Sbjct: 111 VLPQWLAQP-DV-IHKDIKGHLVPVCKIAGLAPKFINKLHHNGIDHFFPVQAEVIPAVLE 168
Query: 63 -------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
IGPG ++ RD+C+++PTGSGKTL++ +P++Q L R + +RAL VLPT++LA
Sbjct: 169 SAQQGLLIGPGGYKPRDICVSAPTGSGKTLAFVIPVIQVLMQRVICEVRALAVLPTKELA 228
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
QV VF+ A L V +
Sbjct: 229 QQVFK---------------------------------------VFSTYAEGTPLRVLML 249
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
GQ S A E + L E +S DI+VATPGRL+DHI+ G L
Sbjct: 250 AGQKSFAAEQASL-------------SEYRGSRRRSLADIIVATPGRLVDHIHKKSGLNL 296
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
E L +L++DE DR++ +QAWL V++ T S P A+ +
Sbjct: 297 EQLRFLIIDEADRMIDSMHQAWLSQVVKATYSSGSE---------PEAWSIFSRSEPACI 347
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-------------YK 341
P L K++ SATLTQ+P KL QLDLH P ++ + +
Sbjct: 348 TAASLSPPRMPLQKLLFSATLTQNPEKLQQLDLHQPRLFSSNHCQADGTVAAAQKADCFD 407
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
P+ L + + C KPL ++ + L + FT+S E+ HRL L+ FG ++
Sbjct: 408 FPQGLTEFYVPCTLSRKPLLILHFVLRLKLSPILCFTNSREAAHRLYLLVQLFGG--VQA 465
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E+S + R +TLK F++GKIQ+L+S+DA RG+DV GV VVNYD P Y++TYIHR
Sbjct: 466 AEFSSRLSPAERKQTLKDFQQGKIQLLISTDATARGIDVSGVKCVVNYDAPQYVRTYIHR 525
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
GRTARAG+ G FT L + K+F K++ A + + S ++ + Y+
Sbjct: 526 VGRTARAGKSGLAFTFLLGVQEKKFLKMVMDAGSPGIQKQIVKSESLKGMEGRYE 580
>gi|301604620|ref|XP_002931939.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Xenopus (Silurana)
tropicalis]
Length = 660
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/523 (35%), Positives = 261/523 (49%), Gaps = 103/523 (19%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K +PVLP W+ P V ++ ++ P+ + CL P++ L+ + LFPVQ A
Sbjct: 164 EKVLPVLPQWLAQPSLVQKNIKQNLVPIHDIHCLHPKVLKKLEANKVKYLFPVQAEVIPA 223
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ T +G G + D+C+++PTGSGKTL++ +PIVQ L R V +RALVVLPT+
Sbjct: 224 ILDSTCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQALLQRVVCEVRALVVLPTK 283
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV CK VF +GL V
Sbjct: 284 ELAQQV--------CK-------------------------------VFNTYVDGMGLKV 304
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ GQ S E LI + G C S DILV TPGRL+DHI T G
Sbjct: 305 VMVTGQKSFLKEQESLIHKTAF--GFC-----------SLADILVCTPGRLVDHIQQTEG 351
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLP----TVLQLTRSDNENRFSDASTFLPSAFGSLK 287
F L HL +LV+DE DR++ Q WL V Q+ +D+ N F G L
Sbjct: 352 FNLRHLRFLVIDEADRMIDSMNQDWLSHVTKAVFQVV-ADSPNML-----FTRKEPGILT 405
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------GET 338
C P L K++ SATLTQ+P KL QL L+ P T+ ET
Sbjct: 406 AASSC--------LPQTPLQKLLFSATLTQNPEKLKQLGLYQPRLFTSKQKGTSDDSSET 457
Query: 339 R--------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + LPE L Y + C KPL L+ L SL + + FT+S +++HRL L
Sbjct: 458 QMESSTSGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLRFSRVLCFTNSRDASHRLYLL 517
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
+ FG I + E+S R KTLK F +GK+Q+L+S+DA RG+D++GV V+NYD
Sbjct: 518 VRSFG--GISVAEFSSRLSPGERKKTLKEFEQGKVQLLISTDATARGIDIKGVKCVINYD 575
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
P +I+TY+HR GRTARAG+ G FT+L K + + +L+ A
Sbjct: 576 APQFIRTYVHRVGRTARAGKAGLAFTMLLKVQENPYFSMLRDA 618
>gi|393221493|gb|EJD06978.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 496
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 241/499 (48%), Gaps = 97/499 (19%)
Query: 43 LQNMGISSLFPVQVAVW-----QETIGPGLF-----ERDLCINSPTGSGKTLSYALPIVQ 92
L ++GI+ F VQ A+ + L+ +D+C ++PTGSGKTL+Y +PIV+
Sbjct: 5 LLDLGINEFFAVQTALLPFLLPSKRCSRALYLPYDPPQDVCASAPTGSGKTLAYVIPIVE 64
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
LS R LRALVVLPTRDL LQV
Sbjct: 65 ILSARIATKLRALVVLPTRDLVLQV----------------------------------- 89
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
++VF A+ GL +G+A GQ S A E +L+ D + Q S V
Sbjct: 90 ----QEVFEAVGKGRGLKIGVATGQHSFAHEQGQLVP----------DQDKGSQGGASKV 135
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR------S 266
DIL+ TPGRLMDH+N T GFTL+HL +LV+DE DRLL +++Q WL VL R S
Sbjct: 136 DILICTPGRLMDHLNGTPGFTLQHLRFLVIDEADRLLAQSFQDWLAQVLSALRPPTQSIS 195
Query: 267 DNENRFS----DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
D + S AS+ L S+ + D + K++ SATLT+DP ++
Sbjct: 196 DGVSSLSLNKPGASSILGFGHDSIAPAFLPHIPTDLDDPKHSSCQKLLFSATLTRDPARI 255
Query: 323 AQLDLHHPLFLTT----------------GETRYKLPERLESYKLICESKLKPLYLVALL 366
A L L P + G + +P L+ + + + KPL L LL
Sbjct: 256 AALGLRDPKYFVVQATTSIDRDTSGPAALGMENFAMPPSLKEHYITTPTARKPLILFHLL 315
Query: 367 QSLGEEKCIVFTSSVESTHRLCTLLNHFG------------ELRIKIKEYSGLQRQSVRS 414
+ G +VFT S EST RL LL +F RI + YS R
Sbjct: 316 HNRGISNALVFTKSAESTARLVKLLEYFEVAYLALSDTVNPPKRIVAQAYSSDLPSGERK 375
Query: 415 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 474
L+ F++ +I +LV SD + RG+D+ V +VV+YD P I+ Y+HRAGRTARAG+ G
Sbjct: 376 NVLEKFKKQEIDILVCSDLVARGLDISHVAHVVSYDAPVDIRKYVHRAGRTARAGRAGDA 435
Query: 475 FTLLHKDEVKRFKKLLQKA 493
+TL+ E K FK +L+ A
Sbjct: 436 WTLVEDQEAKFFKDMLRDA 454
>gi|91092858|ref|XP_969365.1| PREDICTED: similar to ATP-dependent RNA helicase DDX51 [Tribolium
castaneum]
gi|270003080|gb|EEZ99527.1| hypothetical protein TcasGA2_TC000109 [Tribolium castaneum]
Length = 601
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 255/512 (49%), Gaps = 97/512 (18%)
Query: 5 KKKSMPVLP-WMRSPVDVS--LFE-DCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-- 58
K K+ VLP W+ +P +S L E C + L LD L+ L+ G+ LFPVQ V
Sbjct: 103 KPKADRVLPQWLANPTVISSDLQELTCKVSKLKELDKGLREQLKANGVKYLFPVQAEVIP 162
Query: 59 W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
W +F RD+C+++PTGSGKTL++ LP+VQTL VR +RALV+LPT+DLA
Sbjct: 163 WVLQSRQNADIMFPRDVCVSAPTGSGKTLAFVLPVVQTLKQFTVRKIRALVILPTQDLAE 222
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
QV F S F + VGL
Sbjct: 223 QV---------------------------FKS------------FKLYTQGTRIEVGLVS 243
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G+ E +L+ C+ S +DILV T GRL++H+ +T GF L+
Sbjct: 244 GKQMFQAEQKQLV-----YFNECFG-------FVSKIDILVCTAGRLVNHLKSTNGFNLQ 291
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +L++DE DR+L WL L+ +NR K + C ++
Sbjct: 292 ALEFLIIDEADRVLESVQDDWL-YHLEKHIYTIQNR---------------KVLNVCTLQ 335
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG---------------ETRY 340
R + P+ K++ SATLTQDP K+ +L L P T+ +Y
Sbjct: 336 R----QRAPQ--KLLFSATLTQDPEKIEKLSLFQPKLFTSSVVENSNESEEKPMILTGKY 389
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
P+ L ++C +KPL L A L+ K +VFT SVES HRL LL + R+K
Sbjct: 390 TTPKELTEKYIVCSKDVKPLVLYAFLKRENLTKTLVFTHSVESAHRLKILLKSLFKKRLK 449
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
I+E S + R + + +F +G++ +L+ +D + RG+D+ GVN V++Y P Y+KTYIH
Sbjct: 450 IEEISSNLKGKSRDEFISSFTKGEVDLLICTDFLARGIDLPGVNCVISYSAPKYLKTYIH 509
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
RAGRTARAG+ G TLLH+++V FK LL+K
Sbjct: 510 RAGRTARAGESGLAVTLLHEEQVPAFKTLLKK 541
>gi|432947382|ref|XP_004084018.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Oryzias latipes]
Length = 632
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 260/536 (48%), Gaps = 98/536 (18%)
Query: 11 VLP-WMRSPVDVSLFEDCPLDHLP-CLD----PRLKVALQNMGISSLFPVQVAV------ 58
VLP W+ P ++ D + LP C++ P+L+ LQ+ G+ FPVQ V
Sbjct: 141 VLPQWLAQPD--AICRDIKNNLLPVCVESPLCPQLQKKLQDNGVHHFFPVQAEVIPAILD 198
Query: 59 ---WQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
+G G F RD+C+++PTGSGKTL++ LP++Q L R V +RAL VLPT++LA
Sbjct: 199 AAQHGSLLGRGGFRPRDICVSAPTGSGKTLAFVLPVIQVLMTRMVCEVRALAVLPTKELA 258
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
QV VF A L V +
Sbjct: 259 QQVYK---------------------------------------VFGTYAEGTPLRVLML 279
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
GQ S A E + L ++ G+ +S DI+VATPGRL+DHIN G L
Sbjct: 280 AGQKSFAAEQASL---SEIRGGV----------RRSTADIIVATPGRLVDHINKNSGLCL 326
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
+ L +L++DE DR++ +Q+WL V TR+ + P L +
Sbjct: 327 QQLRFLIIDEADRMIDSMHQSWLSLV---TRA----------VYGPETTKLLGRTEPACI 373
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-------------RYK 341
P L K++ SATLTQ+P KL QL LH P ++ + R+
Sbjct: 374 TAASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSAHSNDPPADATALKPERFD 433
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
P+ L Y + C KPL ++ + + + FT+S E+ HRL L+ FG ++
Sbjct: 434 FPQGLTEYYVPCTLSKKPLLILHFILRMKLHPILCFTNSRETAHRLYLLVQLFGG--VQA 491
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E+S + R +TLK F +GKIQ+L+S+DA RG+D+ GV VVNYD P +I+ YIHR
Sbjct: 492 AEFSSRLSPNERKRTLKEFDQGKIQLLISTDAAARGIDIPGVKCVVNYDAPQFIRMYIHR 551
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
GRTARAG+ G FT L + + KRF +++Q+A + + ++S+ Y+
Sbjct: 552 VGRTARAGKSGLAFTFLLRVQEKRFLQMVQEAGSPGLQKQIVKPESLKSMEERYEG 607
>gi|223999483|ref|XP_002289414.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220974622|gb|EED92951.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 494
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 248/493 (50%), Gaps = 93/493 (18%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSN--------RAVRCLRALVVLPTRDLALQVNSAR 121
RD+C ++PTGSGKTL++ LP++ L N R R LRALVVLP RDLA QV+
Sbjct: 19 RDVCCHAPTGSGKTLAFVLPLLTALYNESPGQSCTRGFRRLRALVVLPGRDLAKQVH--- 75
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG----Q 177
DVF A L +GLAVG +
Sbjct: 76 ------------------------------------DVFVRYAKGSHLKIGLAVGGGKKK 99
Query: 178 SSIADEISELIK---RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
S + E L+ + + GI PE QSAVDILVATPGRLMDH+++T GFTL
Sbjct: 100 SDLVYERRSLVAYDGTTRRDNGIQVFPE---FGGQSAVDILVATPGRLMDHLDSTPGFTL 156
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
+HL +LV+DE DRL+ + YQ W+ VL+ S++ NRF + +P K G
Sbjct: 157 QHLRFLVIDEADRLVNQPYQNWVGRVLEA--SNSSNRFGSS---VPVVRHGEKDQANTGG 211
Query: 295 E--RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERL 346
E G +P P L KM+ SATLTQDP KLA L L +P + Y +PE L
Sbjct: 212 ELVSGMFGRPVP-LRKMLFSATLTQDPQKLAVLGLKNPKHFDANQVENIKAGSYSVPEGL 270
Query: 347 ESYKLICESKLKPLYLVALL--------QSLGE-----EKCIVFTSSVESTHRLCTLLNH 393
+ C ++ KP+ L+ALL S G+ IVFTSSV+STHRL LL
Sbjct: 271 TERMVECTAEQKPMVLLALLLDTEQLHSDSAGDGVKGVNLSIVFTSSVDSTHRLARLLQL 330
Query: 394 FGEL-----RIKIKEYSGLQRQSVRSKTLKAFR----EGKIQVLVSSDAMTRGMDVEGVN 444
E I E+S R+ L+ R ++ VLV SD M+RGMD+ V+
Sbjct: 331 LWEAGGYGPSSTIAEFSSSISAKQRAGILRRCRSSNVSNRVSVLVCSDGMSRGMDLPCVS 390
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 504
V+NYD P+Y KTY+HR GRTARAG+ G+ ++L ++ +F+++ + S I
Sbjct: 391 AVINYDVPSYAKTYVHRCGRTARAGKEGKAISVLKGGQIAKFQRMRRLIGGGSVEKMGIK 450
Query: 505 SSLIESLRPVYKS 517
LI+ Y++
Sbjct: 451 KELIKGTLSTYQA 463
>gi|336370797|gb|EGN99137.1| hypothetical protein SERLA73DRAFT_54272 [Serpula lacrymans var.
lacrymans S7.3]
Length = 514
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 240/497 (48%), Gaps = 101/497 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVW-----QETIGPGLFE-----RDLCINSPTGSGKTL 84
L +++ L+ +GI+ LF VQ + ++ GL+ RD+C+++PTGSGKTL
Sbjct: 69 LSVKMRRRLKELGITELFAVQTRLLPFLLPRDARKRGLYAPYAPPRDVCVSAPTGSGKTL 128
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQ 144
+Y LPIV+TLS+R + LRALVVLPTRDL +QV
Sbjct: 129 AYVLPIVETLSSRIITRLRALVVLPTRDLVMQV--------------------------- 161
Query: 145 FDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 204
++ F + GL VG A GQ S A E S+LI
Sbjct: 162 ------------RETFEEVGKGRGLKVGTATGQHSFAHEQSQLIA--------------- 194
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 264
+DIL+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q W+ V+ T
Sbjct: 195 -DRSSGKIDILICTPGRLVDHMNGTPNFSLQHLRFLVIDEADRLLAQSFQDWVARVVTAT 253
Query: 265 R-----------SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD-KPYPRLVKMVLS 312
R ++ E F A P + I G+ D KP K++ S
Sbjct: 254 RPTTFPSSGTPRAEEEETFGCADGLAPPLLHAKYAIANT---YGYMDEKPSSSCQKLLFS 310
Query: 313 ATLTQDPNKLAQLDLHHPLFLTTGETR--------------YKLPERLESYKLICESKLK 358
ATL +DP KLA L L + + R Y +P L + ++C S K
Sbjct: 311 ATLPRDPGKLAGLQLRDVKYFVVQKARGGREEGVLDVVMERYTMPATLREHMIVCASSEK 370
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-------GELRIKIKEYSGLQRQS 411
PL L L+Q +VFT S EST RL L F G L + K YS
Sbjct: 371 PLVLFDLVQRHKVRNGLVFTKSAESTARLVRLFELFEKAVAGEGRLGVVAKAYSSDLSVG 430
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L+ F+ +IQ+LV SD ++RGMD+ V++VV+YD P ++ Y+HR GRTARAG+
Sbjct: 431 ERRGILEKFKAEEIQILVCSDLISRGMDMSHVSHVVSYDVPVDMRKYVHRVGRTARAGRE 490
Query: 472 GRCFTLLHKDEVKRFKK 488
G +TL+ + EV K
Sbjct: 491 GDAWTLVEEQEVSAVTK 507
>gi|189217546|ref|NP_001121235.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Xenopus laevis]
gi|169642008|gb|AAI60740.1| LOC100158308 protein [Xenopus laevis]
Length = 678
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 260/522 (49%), Gaps = 95/522 (18%)
Query: 3 EAKKKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
+A +K +PVLP W+ P + ++ ++ P+ +P L P++ L+ + FPVQ V
Sbjct: 179 KAVEKVLPVLPQWLTQPSFLQKNIKQNLVPIHDIPGLHPKVLKKLEVNKVKDFFPVQAEV 238
Query: 59 WQETI---------GPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
+ G G + D+C+++PTGSGKTL++ +PIVQTL R V +RALVVL
Sbjct: 239 IPAVLDSSCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQTLLQRVVCEVRALVVL 298
Query: 109 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 168
PT++LA QV CK VF +G
Sbjct: 299 PTKELAQQV--------CK-------------------------------VFNTYVDGMG 319
Query: 169 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 228
L V + GQ S E LI++ S DILV TPGRL+DHI
Sbjct: 320 LKVVMIAGQKSFLKEQESLIQKTAFG-------------FSSLADILVCTPGRLVDHIQQ 366
Query: 229 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 288
T GF L HL +LV+DE DR++ Q WL V + S F G L
Sbjct: 367 TEGFNLRHLRFLVIDEADRMIDSMNQDWLNHVTKAVFRLEAG--SPNMLFTRKEPGILTA 424
Query: 289 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT--------TGETR 339
C P L K++ SATLTQ+P KL QL L+ P LF++ + ET+
Sbjct: 425 ASSC-----LHQTP---LQKLLFSATLTQNPEKLKQLGLYQPRLFISKQKGNPNDSSETQ 476
Query: 340 --------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
+ LPE L Y + C KPL L+ L SL + + FT+S +++HRL L+
Sbjct: 477 MEPSISGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLRFSRVLCFTNSRDASHRLYLLI 536
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
FG I + E+S R +TLK F +GK+Q+LVS+DA RG+D++GV ++NYD
Sbjct: 537 RSFG--GIDVAEFSSRLSPGERKRTLKEFEQGKVQLLVSTDATARGIDIKGVKCIINYDA 594
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
P +I+TY+HR GRTARAG+ G FT+L K + K + +L+ A
Sbjct: 595 PQFIRTYVHRVGRTARAGKAGLAFTMLLKVQEKPYFGMLRDA 636
>gi|426199228|gb|EKV49153.1| hypothetical protein AGABI2DRAFT_201250 [Agaricus bisporus var.
bisporus H97]
Length = 602
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 247/519 (47%), Gaps = 118/519 (22%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE----------RDLCINSPTG 79
D+ L +++ L +GI+ LF VQ A+ I + RD+CI++PTG
Sbjct: 113 DNSTHLSEKMRRRLHGLGITELFAVQTALLPFLIPSSDVQHQLYLSTRPPRDVCISAPTG 172
Query: 80 SGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIA 139
SGKTL+YALPIV+ LS+R + LRAL++LPTRDL
Sbjct: 173 SGKTLAYALPIVEILSSRVLTQLRALIILPTRDL-------------------------- 206
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 199
+ QV++ F + GL +G A GQ S A E S+L+
Sbjct: 207 -------------VAQVRETFEVLGKGRGLKIGTATGQHSFAHEQSQLVN---------- 243
Query: 200 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 259
D L S VDIL+ TPGRL+DH+N T FTL+HL +LV+DE DRLL +++Q WL
Sbjct: 244 DQTSSLLGGSSRVDILICTPGRLIDHMNGTPNFTLQHLRFLVIDEADRLLAQSFQDWLAQ 303
Query: 260 VLQLTRSDNE---------NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL---- 306
VL R + T P L PYP
Sbjct: 304 VLAALRPHRTPNCVPGTQVDSIPHPDTVAPYLLHRL---------------PYPHYPTFL 348
Query: 307 --------VKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR---------------YKLP 343
K++ SATLT+DP K+A L+L P + ++R + +P
Sbjct: 349 TEVHESSCQKLLFSATLTRDPGKIASLELREPKYFIVQKSRESDGQDRILSVVMEKFSIP 408
Query: 344 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR----- 398
L+ + L+CES KPL L+ L +VFT S EST RL L + F + R
Sbjct: 409 STLK-HMLVCESSQKPLMFFHLVFHLNVTDALVFTKSSESTARLVRLFDFFQKWRTAESG 467
Query: 399 --IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+ ++ YS R L+ F+ +I +L+ SD ++RG+D+ V++VV+YD P ++
Sbjct: 468 KSLVVQAYSSDLSVGERKVILERFKAQEINILICSDLISRGIDISHVSHVVSYDVPVDMR 527
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
Y+HR GRTARAG+ G + L+ + E + FK +L+ AD+
Sbjct: 528 KYVHRVGRTARAGRSGDAWALVEEQEARYFKNMLRDADH 566
>gi|260801978|ref|XP_002595871.1| hypothetical protein BRAFLDRAFT_84239 [Branchiostoma floridae]
gi|229281121|gb|EEN51883.1| hypothetical protein BRAFLDRAFT_84239 [Branchiostoma floridae]
Length = 806
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 184/503 (36%), Positives = 254/503 (50%), Gaps = 87/503 (17%)
Query: 14 WMRSPVDVSLFED------CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG--- 64
W+ P S+ E+ P++ P + L+ L+ G+ +LFPVQ V +
Sbjct: 289 WLADP---SVIENDIQSNLVPVEGTPYVGEFLRNKLKENGVENLFPVQHQVIPAVLEDAE 345
Query: 65 -------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
G D+C+++PTGSGKTL++ +P+VQ L R V +RALVVLPT+DLA+Q+
Sbjct: 346 DGTIMGRAGFRPSDICVSAPTGSGKTLAFVIPVVQALLQRVVCEVRALVVLPTKDLAVQI 405
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
VF L V GQ
Sbjct: 406 YK---------------------------------------VFNHYTSGSRLKVANCSGQ 426
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
S+A E + L+K E+ Y QS DI+VATPGRL+DHI T GF L HL
Sbjct: 427 KSLAAERNALVK----ESHGVY---------QSLADIVVATPGRLVDHIEKTPGFNLRHL 473
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS-DASTFLPSAF--GSLKTIRRCG- 293
YLV+DE DR+L + Q WL V TR+ E + S + LP G L G
Sbjct: 474 RYLVIDEADRMLDQIKQDWLAKV---TRAVYEGQGSTEEKPGLPMMLWAGVLGGRTAPGP 530
Query: 294 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLIC 353
+ + Y L K++ SATL+Q+P KL QL+L HP T+ R+K +R +
Sbjct: 531 LTAANAARMYQPLQKLLFSATLSQNPEKLQQLNLFHPRLFTSV-VRHK--QRKQETASAG 587
Query: 354 ESKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 410
S+ K ++ G +K + FT S+ESTHRL L FG + + E+S
Sbjct: 588 SSEEKGTFVGKFTTPAGLQKFQHVLCFTGSLESTHRLYLLAKLFG--GVTVAEFSSNLPP 645
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
R+K L FR GKIQ++V SDAM RGMDVEGV V++YD P Y+KTYIHR GRTARAG+
Sbjct: 646 DRRTKILTKFRTGKIQLIVCSDAMARGMDVEGVEVVISYDVPPYVKTYIHRVGRTARAGK 705
Query: 471 LGRCFTLLHKDEVKRFKKLLQKA 493
GR F+L+ ++E + ++ LQ+A
Sbjct: 706 EGRAFSLVLQEE-EFLQEFLQEA 727
>gi|161611979|gb|AAI55869.1| LOC100135117 protein [Xenopus (Silurana) tropicalis]
Length = 644
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 257/522 (49%), Gaps = 108/522 (20%)
Query: 6 KKSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQV----A 57
+K +PVLP W+ P V ++ ++ P+ + CL P++ L+ + LFPVQ A
Sbjct: 155 EKVLPVLPQWLAQPSLVQKNIKQNLVPIHDIHCLHPKVLKKLEANKVKYLFPVQAEVIPA 214
Query: 58 VWQET-----IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ T +G G + D+C+++PTGSGKTL++ +PIVQ L R V +RALVVLPT+
Sbjct: 215 ILDSTCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQALLQRVVCEVRALVVLPTK 274
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV CK VF +GL V
Sbjct: 275 ELAQQV--------CK-------------------------------VFNTYVDGMGLKV 295
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ GQ S E LI + G C S DILV TPGRL+DHI T G
Sbjct: 296 VMVTGQKSFLKEQESLIHKTAF--GFC-----------SLADILVCTPGRLVDHIQQTEG 342
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT---RSDNENRFSDASTFLPSAFGSLKT 288
F L HL +LV+DE DR++ Q WL V + +D+ N F G L
Sbjct: 343 FNLRHLRFLVIDEADRMIDSMNQDWLSHVTKAVFQVVADSPNML-----FTRKEPGILTA 397
Query: 289 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------GETR 339
C P L K++ SATLTQ+P KL QL L+ P T+ ET+
Sbjct: 398 ASSC--------LPQTPLQKLLFSATLTQNPEKLKQLGLYQPRLFTSKQKGTSDDSSETQ 449
Query: 340 --------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
+ LPE L Y + C KPL L+ L SL + + FT+S +++HR
Sbjct: 450 MESSTSGNFSLPEGLTHYYIPCNLNSKPLILLHFLLSLRFSRVLCFTNSRDASHR----- 504
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
FG I + E+S R KTLK F +GK+Q+L+S+DA RG+D++GV V+NYD
Sbjct: 505 --FG--GISVAEFSSRLSPGERKKTLKEFEQGKVQLLISTDATARGIDIKGVKCVINYDA 560
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
P +I+TY+HR GRTARAG+ G FT+L K + + +L+ A
Sbjct: 561 PQFIRTYVHRVGRTARAGKAGLAFTMLLKVQENPYFSMLRDA 602
>gi|358055147|dbj|GAA98916.1| hypothetical protein E5Q_05604 [Mixia osmundae IAM 14324]
Length = 2128
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 240/499 (48%), Gaps = 85/499 (17%)
Query: 31 HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG--------PGLFERDLCINSPTGSGK 82
+ P L P L + LQ G+ +LF VQ+A Q +G P RDLC+N+PTGSGK
Sbjct: 306 NAPLLSPTLLIRLQEQGLETLFAVQMATCQHILGTEQTRSLYPRYPPRDLCVNAPTGSGK 365
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y LPIVQ LS V +RAL++LPTRDL
Sbjct: 366 TLAYVLPIVQMLSTTIVTRMRALIILPTRDL----------------------------- 396
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
+ QVKD F L +G A G S E +A + D
Sbjct: 397 ----------VTQVKDTFEIYCKGTSLRIGTATGSQSFKKE----------QAILVGDSA 436
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
S VDIL+ATPGRL+DH+ + +L+HL +LV+DE DRLL +++Q WL V
Sbjct: 437 HYYPGGSSKVDILIATPGRLIDHLTQSPNLSLQHLRFLVMDEADRLLNQSFQDWLQVVQA 496
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG---FKDKPYPRLVKMVLSATLTQDP 319
R S+ + LP A + +++ + P L +++ SATL++DP
Sbjct: 497 HLRYPPPT--SEDAAELPLAGDASAAPHVLALQQATTSMSETPIQPLQQILCSATLSRDP 554
Query: 320 NKLAQLDLHHPLFLTTGETR------------YKLPERLESYKLICESKLKPLYLVALLQ 367
+++ L+L +P+F+ E R + LP L+ + L+ S KPL L LL
Sbjct: 555 RQVSALNLRNPVFVAVREARDDQMDELETEDNFALPATLKEHMLVTSSGSKPLMLFYLLH 614
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHF-----------GELRIKIKEYSGLQRQSVRSKT 416
+ + FT SVES RL L+ F K+KE+SG R K
Sbjct: 615 AKSLSNVLCFTKSVESAQRLAKLVELFETEYASRSEGADNQGFKVKEFSGSLPVPQRKKI 674
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L AF G+I +L+ SD + RG+D+ V +V++YD P ++ Y+HR GRTARAG+ G ++
Sbjct: 675 LAAFVAGEIDMLICSDIIARGIDLPSVAHVISYDVPVDMRKYVHRVGRTARAGRPGDAWS 734
Query: 477 LLHKDEVKRFKKLLQKADN 495
L+ E FK LL A +
Sbjct: 735 LVESQEANFFKALLTDAQH 753
>gi|409078236|gb|EKM78599.1| hypothetical protein AGABI1DRAFT_74928 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 602
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 250/516 (48%), Gaps = 112/516 (21%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE----------RDLCINSPTG 79
D+ L +++ L +GI+ LF VQ A+ I + RD+CI++PTG
Sbjct: 113 DNSTHLSEKMRRRLHGLGITELFAVQTALLPFLIPSSDVQHQLYLSTRPPRDVCISAPTG 172
Query: 80 SGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIA 139
SGKTL+YALPIV+ LS+R + LRAL++LPTRDL
Sbjct: 173 SGKTLAYALPIVEILSSRILTQLRALIILPTRDL-------------------------- 206
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 199
+ QV++ F + GL +G A GQ S A E S+L+
Sbjct: 207 -------------VAQVRETFEVLGKGRGLKIGTATGQHSFAHEQSQLVN---------- 243
Query: 200 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 259
D L S VDIL+ TPGRL+DH+N T FTL+HL +LV+DE DRLL +++Q WL
Sbjct: 244 DQTSSLLGGSSKVDILICTPGRLIDHMNGTPNFTLQHLRFLVIDEADRLLAQSFQDWLAQ 303
Query: 260 VLQL------------TRSDNENRFSDASTFL------PSAFGSLKTIRRCGVERGFKDK 301
VL TR D+ S +L P L + +
Sbjct: 304 VLTALRPHRTQNCVPGTRVDSIPHPDTVSPYLLHRLPFPHYSTFLTEVHESSCQ------ 357
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET---------------RYKLPERL 346
K++ SATLT+DP K+A L+L P + ++ ++ +P L
Sbjct: 358 ------KLLFSATLTRDPGKIASLELREPKYFIVQKSSESDGQDHILSVVMEKFSIPSTL 411
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-------I 399
+ + L+CES KPL L+ L +VFT S EST RL L + F + R +
Sbjct: 412 K-HMLVCESSQKPLMFFHLVFHLNVTDALVFTKSSESTARLVRLFDFFQKWRAVESGKSL 470
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
++ YS R L+ F+ +I +L+ SD ++RG+D+ V++VV+YD P ++ Y+
Sbjct: 471 VVQAYSSDLSVGERKVILERFKAQEINILICSDLISRGIDISHVSHVVSYDVPVDMRKYV 530
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
HR GRTARAG+ G + L+ + E + FK +L+ AD+
Sbjct: 531 HRVGRTARAGRSGDAWALVEEQEARYFKNMLRDADH 566
>gi|195127527|ref|XP_002008220.1| GI11933 [Drosophila mojavensis]
gi|193919829|gb|EDW18696.1| GI11933 [Drosophila mojavensis]
Length = 670
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 246/491 (50%), Gaps = 96/491 (19%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKT 83
+ LP L+ ++ AL+ M I LFPVQ AV W + P F RD+C+++PTGSGKT
Sbjct: 144 IKQLPYLEKYIRSALKQMKIKRLFPVQTAVIPWILEAQAKPEPFRPRDICVSAPTGSGKT 203
Query: 84 LSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
L++A+PIVQ L+ R V+C +RALVVLP +LALQV
Sbjct: 204 LAFAIPIVQLLAKR-VQCKVRALVVLPVAELALQVYK----------------------- 239
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
VF+A+ L V L Q + DE +L+++ K G+ Y
Sbjct: 240 ----------------VFSALCSLTELEVCLLSKQHRLEDEQDKLVEQYK---GVYY--- 277
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
S VDI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL +
Sbjct: 278 -------SKVDIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDA 330
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
RS + + P + L + +P+ K++ SATL+QDP KL
Sbjct: 331 HVRSTADQLLTGVQA--PLCYQELLN--------SWGKQPH----KLLFSATLSQDPEKL 376
Query: 323 AQLDLHHPLFLTTGET----------------------RYKLPERLESYKLICESKLKPL 360
L L P TT T +Y P L + E +LKPL
Sbjct: 377 QNLRLFQPKLFTTTLTMPVLQPALDNGELPDQTSTFIGKYTTPAELTEQYCVTEMRLKPL 436
Query: 361 YLVALLQSLGEEKCIVFTSSVESTHRL-CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
L A++ ++ + FT+S ++ +RL C L++ F + I++KE S + R L
Sbjct: 437 TLYAMVLLNNWKRFLCFTNSADTANRLACVLVHLFKDSTIRVKELSAKMSATKRGHRLSE 496
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F G I LV SDA+ RG+DV V+ VV+Y+ P +IKTYIHR GRTARAGQ G TLL
Sbjct: 497 FARGNIHGLVCSDALARGIDVPNVDVVVSYEAPRHIKTYIHRVGRTARAGQKGTAITLLT 556
Query: 480 KDEVKRFKKLL 490
+ FKK+L
Sbjct: 557 DKDQANFKKML 567
>gi|303273266|ref|XP_003055994.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462078|gb|EEH59370.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 526
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 250/500 (50%), Gaps = 60/500 (12%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERD 71
+ W SPV + + HL + + + LQ G+ + VQ A W T G F+ D
Sbjct: 1 MSWFNSPVSLLDLGENETTHLRGIHNKFRSVLQVSGLDQVLTVQSATWLATGGGMCFDCD 60
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNR-AVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
+C+ PTGSGKTL+YALP++Q L++R +R RAL+V+PT DLA QV+ C +
Sbjct: 61 ICVRGPTGSGKTLAYALPLLQALASRPGLREQRALIVIPTLDLATQVSQLLSPLC--DAT 118
Query: 131 GLIAD---HSIAEMCVQFDSLLFISLPQV-KDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
GL + + C+ D L +L + + AA+ I +
Sbjct: 119 GLTVGVPLRTHQDKCL-VDRLTLENLATLNRPSHAAL----------------ILQPVDH 161
Query: 187 LIKRPKLEAGICYD---PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
I R ++ + P D E + D++VATPGRL+ H+ L L +LV+D
Sbjct: 162 KIVRARIRQATDFSNAIPLDSASEER--FDVMVATPGRLVAHVKEVYYQLLSGLEFLVID 219
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DR+LR++YQ + + + S G+ R G +
Sbjct: 220 EADRVLRQSYQGCI-------------------SLIDSGVGA----RSPHTGNGDRSVSS 256
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------ETRYKLPERLESYKLICES 355
RL K+++SATLT D + A L L+ P + + +++Y +P L+ ++ E+
Sbjct: 257 RRLRKLLISATLTHDSVRFAHLHLNSPRVIQSSAYESDSLCDSQYVIPSDLDENFIVTEA 316
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
KPL L ALL+ +G IVFTSSV THRL LL+ L EYS Q VRS
Sbjct: 317 IKKPLALCALLKRIGRVPVIVFTSSVAITHRLFLLLDSIKGLPSSAVEYSSSFSQGVRSA 376
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L +FR G Q+LV+SDA TRG+D++ V V++YD P + TYIHR GRTARAGQ G +
Sbjct: 377 ALDSFRSGSKQLLVASDAATRGLDIKHVAAVISYDVPLHQNTYIHRVGRTARAGQKGTAY 436
Query: 476 TLLHKDEVKRFKKLLQKADN 495
T+ E +RF+ +L K D
Sbjct: 437 TICRSSETQRFRNILTKVDG 456
>gi|255071295|ref|XP_002507729.1| predicted protein [Micromonas sp. RCC299]
gi|226523004|gb|ACO68987.1| predicted protein [Micromonas sp. RCC299]
Length = 523
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 186/486 (38%), Positives = 251/486 (51%), Gaps = 72/486 (14%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+D LP L+P+L VAL+ I F +Q W+ T G F+RDLC+++PTGSGKTL+YA+
Sbjct: 19 IDLLPGLEPKLCVALKTSKICRPFKIQADTWRHTGGGLSFDRDLCVSAPTGSGKTLAYAI 78
Query: 89 PIVQTLSNRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL---IADHSIAEMCVQ 144
PIVQ L + + LR+LV++PT DLA QV + K C+ + GL IA S +
Sbjct: 79 PIVQALCRQTKLSHLRSLVIVPTGDLAAQVGNV-FKPLCQAV-GLKVSIAQGSGIKSLYH 136
Query: 145 FDSL----LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
D+ F P VK F L+V Q+++ D S EA I
Sbjct: 137 NDAFGEQNAFRHHPAVKQKFI-----TSLTV-----QTTVTDLTSNT------EADI--- 177
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
VDILV PGRL+ I L+ + +LV+DE DR+LR+ YQ WLP V
Sbjct: 178 ---------RDVDILVTPPGRLVTLIRRFARLFLDRVEFLVIDEADRVLRQTYQGWLPLV 228
Query: 261 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 320
NR TF ++ G RR RL K++ SATLTQDP
Sbjct: 229 ---------NRTVVTGTF-HTSLGDRGASRR-------------RLKKLLFSATLTQDPG 265
Query: 321 KLAQLDLHHPLFLTT------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 374
+LA L L P ++T E RY LP L+ Y +I K L L ALL+ +G
Sbjct: 266 RLAGLHLKAPHRISTVVSQAMRENRYFLPPGLKEYVIISRGDEKLLVLCALLKRIGPTPA 325
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
IVFT+SV++T RL LL+ L K EYS R+++LK FR G+ +LV+SDA
Sbjct: 326 IVFTASVDATRRLFRLLHLMIGLPSKPVEYSSYAPLLHRTESLKLFRSGRCSLLVASDAA 385
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL---- 490
TRG+D E V ++YD P + KTY+HR GR ARA + G +T+ EV +F +L
Sbjct: 386 TRGLDFEHVGVTISYDVPTHPKTYVHRVGRAARAQRRGLAYTICRPTEVDKFHLMLTNIG 445
Query: 491 -QKADN 495
+K DN
Sbjct: 446 VRKEDN 451
>gi|392573109|gb|EIW66250.1| hypothetical protein TREMEDRAFT_35235, partial [Tremella
mesenterica DSM 1558]
Length = 694
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 239/449 (53%), Gaps = 79/449 (17%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
D I++PTGSGKTL+YA+PI++ LS R + LRAL+VLPT+DL +QV
Sbjct: 261 DYLISAPTGSGKTLAYAIPIIEILSARTITRLRALIVLPTKDLVVQV------------- 307
Query: 131 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 190
++ +A L +G GQ S A E L+
Sbjct: 308 --------------------------RETLELLAKGTDLKIGTIGGQHSFAHEQKVLV-- 339
Query: 191 PKLEAGICYDPEDV-LQEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
ED+ ++EL S VDIL+ATPGRL+DH++ T FTL+HL +LV+DE DR
Sbjct: 340 -----------EDLEIKELGGSSKVDILIATPGRLIDHLSQTPNFTLQHLRFLVIDEADR 388
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV---ERGFKDKPYP 304
LL ++YQ WL VL+ TR ++N + +P + + CG+ D P
Sbjct: 389 LLNQSYQDWLMMVLRHTRPTDDN-MALEREIMPDDHVAPLWMSACGLGDKSHSLLDPPEQ 447
Query: 305 RLVKMVLSATLTQDPNKLAQLDLHHPLFL------------TTGETRYKLPERLESYKLI 352
+ K++ SATLT+DP K+A L L+ P + + GE ++ +P L + LI
Sbjct: 448 QCQKLLFSATLTRDPAKVASLSLNSPRYYIIQSSLAQPSAHSIGE-QFAIPASLTEFMLI 506
Query: 353 CESKLKPLYLVALLQS--LGEEKCIVFTSSVESTHRLCTLLNHF----GELRIKIKEYSG 406
+LKPL L+ L+ S ++FT SVES RL LL +F G ++ ++ Y+
Sbjct: 507 LPPQLKPLNLIHLIHSPEYAVSSALIFTKSVESCVRLVKLLEYFEVAFGGGKV-VQGYTS 565
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
R + R K L AF +G +Q+LV SD + RGMD+ V++V++YD P ++ Y+HR GRTA
Sbjct: 566 DMRPAERKKLLAAFGQGDVQLLVCSDLIARGMDLPTVSHVISYDIPLDMRKYVHRVGRTA 625
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
RAG+ G +TL+ K E FK +L+ A +
Sbjct: 626 RAGRSGTAWTLVEKQEALHFKSILKSAGH 654
>gi|194750630|ref|XP_001957633.1| GF10505 [Drosophila ananassae]
gi|190624915|gb|EDV40439.1| GF10505 [Drosophila ananassae]
Length = 683
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 255/523 (48%), Gaps = 103/523 (19%)
Query: 5 KKKSMPVLPWMRSPV---------DVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
+K M + W+ P D + + +D LP L+ +AL+ M I LFPVQ
Sbjct: 106 RKVEMQLPNWLAHPTIIAGGSLQADEEISDAEAIDQLPYLEKSTCLALKQMKIKRLFPVQ 165
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W ++ P RD+C+++PTGSGKTL++A+PIVQ L+NR +RALVVLP
Sbjct: 166 REVIPWILEAQSKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLANRVECKIRALVVLPV 225
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
+LALQV V +A+ L
Sbjct: 226 AELALQVYQ---------------------------------------VISALCNKTELE 246
Query: 171 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 230
V L Q + DE +L++ L G Y S VDI+V TPGRL+DH++AT+
Sbjct: 247 VCLLSKQHKLEDEQEKLVE---LYKGKYY----------SKVDIVVTTPGRLVDHLHATK 293
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
GF L++L +L++DE DR++ +Q WL + + + A T P + L++
Sbjct: 294 GFCLKNLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQS-- 349
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------GET--- 338
F ++P+ K++ SATL+QDP KL L L P TT GE
Sbjct: 350 ------SFGNQPH----KLLFSATLSQDPEKLQNLRLFQPRLFTTVMPVLREPTGEEGDA 399
Query: 339 ----------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 388
+Y P L I E +LKPL L AL++ ++ + FT+S + RL
Sbjct: 400 EADTDGQFLGKYTTPAELTEQICITEMRLKPLTLYALVEKYKWKRFLCFTNSTDQASRLA 459
Query: 389 TLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
++ F K+ E SG VR + LK+F GKI L+ SDA+ RG+DV ++ V+
Sbjct: 460 FVMATLFENSETKVAELSGNLSALVRKQNLKSFANGKINGLICSDALARGIDVADIDVVL 519
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+Y+ P +IKT+IHR GRTARAG+ G TLL + + FKK+L
Sbjct: 520 SYEAPRHIKTHIHRVGRTARAGRKGTAVTLLTEQDQAAFKKML 562
>gi|353239546|emb|CCA71453.1| related to DBP6-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 1596
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 243/509 (47%), Gaps = 101/509 (19%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAV--------------WQETIGPGLFERDLCINSPTGS 80
L R+ L ++GI LF VQ + +Q + P RD+C ++PTGS
Sbjct: 1103 LSSRMLRRLADLGIKELFAVQTVLLPFLLPEDLEQSMLYQPSHPP----RDVCASAPTGS 1158
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
GKTL+YA+PI + LS R V LRALVV+PTRDL
Sbjct: 1159 GKTLAYAIPITEMLSTRIVTRLRALVVVPTRDL--------------------------- 1191
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
+ QV++ F A L +G+A GQ S A E +A I D
Sbjct: 1192 ------------VQQVRETFEACGKGTKLQIGIATGQHSFAHE----------QAQIVGD 1229
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
+ +S VDIL+ TPGRL+DHIN T FTL+HL +LV+DE DRLL +++Q WL V
Sbjct: 1230 ISERSLGGRSRVDILICTPGRLIDHINGTPNFTLQHLRFLVIDEADRLLNQSFQEWLKQV 1289
Query: 261 LQLTR--SDNENRFS--DASTFLPSAFGSLKTIRRCGVERGFKD---KPYPRLVKMVLSA 313
L S N R S D S P G T V D P K++ SA
Sbjct: 1290 LNAISLPSPNGPRLSEGDRSELFPVPDGIAPTWLSALVPTSPTDIDEAPRSSCQKLLFSA 1349
Query: 314 TLTQDPNKLAQLDLHHPLFL------------------TTGETRYKLPERLESYKLICES 355
TLT+DP K+ +L L P + T ++ P L + ++CES
Sbjct: 1350 TLTRDPAKIVELQLRDPKYFIVKGISASQEVGDAMDVNVTHVESFETPGTLREWMIVCES 1409
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF---------GELRIKIKEYSG 406
KPL L L +VFT S EST RL LL +F G +I + +S
Sbjct: 1410 INKPLLLFYLAHKQQISDMLVFTKSAESTTRLLRLLGYFEDAMAEREVGSKKIIAEAFSS 1469
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
S R L+ F+ +I +L+ SD ++RG+D+ V++VVNYD P ++ YIHR GRTA
Sbjct: 1470 DLAPSQRKTVLEKFKAKQIDMLICSDLVSRGIDIPHVSHVVNYDIPVDVRKYIHRVGRTA 1529
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
RAG+ G ++L+ + E+ FK ++++A +
Sbjct: 1530 RAGREGDAWSLVEEQEMHHFKLMMKEAHH 1558
>gi|390594629|gb|EIN04039.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 636
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 250/531 (47%), Gaps = 121/531 (22%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAV----------WQETIGPGLFERDLCINSPTGSGKT 83
L +++ L+ +GI LF VQ A+ + P RD C+++PTGSGKT
Sbjct: 122 SLSEKMRRRLKELGIGELFAVQTALLPFLLPSSPAQRALYMPYDPPRDACVSAPTGSGKT 181
Query: 84 LSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCV 143
L+Y +PIV+ L++R V LRALVVLPTRDL
Sbjct: 182 LAYVIPIVEVLASRIVTRLRALVVLPTRDL------------------------------ 211
Query: 144 QFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 203
+ QV++ F A+ GL + A GQ S A E ++L+ D
Sbjct: 212 ---------VAQVRETFEAVGKGRGLKIATATGQHSFAHEQTQLMA----------DRSK 252
Query: 204 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 263
L S VD+L+ TPGRL+DH+ T FTL+HL +LV+DE DRLL + +Q WL VL
Sbjct: 253 PLLGGSSKVDVLICTPGRLIDHLEGTPNFTLQHLRFLVIDEADRLLAQLFQDWLAKVLAA 312
Query: 264 TR--------------SDNENRFSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRL 306
TR S + +DA L AF SL + G+ F +
Sbjct: 313 TRPPSSLSSAFALSSPSSSVVPHADA---LAPAFASLLGLSPSSPSGLLTEFDEPKASSC 369
Query: 307 VKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE-------------------------TRY 340
K++ SATLT+DP KLA L L P F+ GE ++
Sbjct: 370 QKLLFSATLTRDPGKLAALALREPRYFVVAGERKRAQGAEEREEEAGKMDGVVDFVMEKF 429
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLG----EEKCIVFTSSVESTHRLCTLLNHF-- 394
+PE LE + L+ + KPL L+ L+ + G +VF S E+ RL + F
Sbjct: 430 SVPETLEEHYLVTSAAQKPLALMYLVHARGVGADSGGVLVFAKSAEAVARLVKFVEFFEE 489
Query: 395 ----------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
G R+ +K YS R L+ F+ KI +LV SD + RGMD+ V
Sbjct: 490 ARVDALPADTGRRRVSVKAYSSDLAPGERRAILEGFKARKIDMLVCSDLVARGMDISHVE 549
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
+VV+YD P ++ Y+HR GRTARAG+ G ++L+ + E + FK++L++AD+
Sbjct: 550 HVVSYDAPVDVRKYVHRVGRTARAGRKGCAWSLVEEQEARWFKEMLREADH 600
>gi|195014606|ref|XP_001984044.1| GH15223 [Drosophila grimshawi]
gi|193897526|gb|EDV96392.1| GH15223 [Drosophila grimshawi]
Length = 675
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 244/494 (49%), Gaps = 94/494 (19%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTG 79
++ + L L+ AL+ M I LFPVQ AV W + P F RD+C+++PTG
Sbjct: 137 DETSIKQLAYLEKHTCSALKQMKIERLFPVQRAVIPWILEAQSKPAPFRPRDICVSAPTG 196
Query: 80 SGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIA 139
SGKTL++A+PIVQ L+NR +RALVVLP +LALQV
Sbjct: 197 SGKTLAFAIPIVQLLANRVECKVRALVVLPVAELALQVYK-------------------- 236
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 199
VF+ + L V L Q + DE +L+++ K G+ Y
Sbjct: 237 -------------------VFSVLCSKTELEVCLLSKQHRLEDEQEKLLEQYK---GVYY 274
Query: 200 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 259
S VDI+V TPGRL+DH++AT GF L+ L +LV+DE DR++ +Q WL
Sbjct: 275 ----------SKVDIVVTTPGRLVDHLHATEGFCLKSLQFLVIDEADRIMDAVFQNWLYH 324
Query: 260 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 319
+ R+ + + P + L + +P+ K++ SATL+QDP
Sbjct: 325 LDSHVRTTADQLLTGVQA--PLCYQELLN--------SYGKQPH----KLLFSATLSQDP 370
Query: 320 NKLAQLDLHHPLFLTTGET----------------------RYKLPERLESYKLICESKL 357
KL L L P TT T +Y P L + E +L
Sbjct: 371 EKLQNLRLFQPKLFTTVFTLPVLPSALDIAELPEQSSQFIGKYTTPTELTEQYCVTELRL 430
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKT 416
KPL L ++Q+ G ++ + FT+S ++ RL +L H F I ++E S + VR++
Sbjct: 431 KPLTLYTMVQTYGWKRFLCFTNSADTADRLAFVLKHLFQGSPITVEELSANMKVGVRARR 490
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F +G I LV SDA+ RG+DV V+ V++Y+ P +IKTYIHR GRTARAGQ G T
Sbjct: 491 LADFAKGSIHGLVCSDALARGIDVPNVDIVLSYEAPRHIKTYIHRVGRTARAGQKGTAIT 550
Query: 477 LLHKDEVKRFKKLL 490
LL + + FKK+L
Sbjct: 551 LLTEKDQAPFKKML 564
>gi|281209875|gb|EFA84043.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 559
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 240/482 (49%), Gaps = 86/482 (17%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L + GI L VQ V T G D+C+ +PTGSGKTL+Y LPIVQ L NR V
Sbjct: 51 LNDQGIVELLAVQNEIVPFIARTEG-----HDICVCAPTGSGKTLAYVLPIVQKLYNRVV 105
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LR + ++PT DL + Q +
Sbjct: 106 RRLRVICIVPTHDL---------------------------------------VTQTEAT 126
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
F +I L V +G S A E S ++ ++ E+ QS VDI+V TP
Sbjct: 127 FKSITKGTDLVVE-TLGLRSFALEQSLIVSSH-------FNDENNSVTYQSLVDIIVCTP 178
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS------ 273
GRL++H+N T GF L+HL YLV+DE DRLLRE++Q WL V+ + E S
Sbjct: 179 GRLVEHLNETPGFDLQHLTYLVIDEADRLLRESFQYWLEKVMDSSSVSKERLISIGSRGD 238
Query: 274 ---DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
S + ++ G R FK+ R++K++LSAT++ +P K++ L L+ P
Sbjct: 239 ISISDSKYNNTSSGGSSNFRSHIDHLSFKE---SRVIKLLLSATMSYNPEKISLLKLNAP 295
Query: 331 LFLTTG---ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK-------------C 374
L+ + E +Y +P+ L+ + C S KPL L++++ ++ + K
Sbjct: 296 LYFQSNKISELKYTIPDTLKESYIACHSDQKPLALISVIGNIFKSKQQQQTDQNDNIARI 355
Query: 375 IVFTSSVESTHRLCTLLNHFGEL---RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
I FT+S++ T RL TLL GE+ ++K +YS RS LK F G I VL+ S
Sbjct: 356 ICFTNSIDITQRLNTLLGFIGEVDGVKLKPAQYSSSINSIERSNLLKLFANGDINVLICS 415
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D + RGMD+ V+ V+NY+ P Y+HR GRTARAG+ G +T++ ++E F +++
Sbjct: 416 DILARGMDLPNVDAVINYNAPPSAVLYVHRVGRTARAGRKGSAYTIVAREEKSYFTNMIK 475
Query: 492 KA 493
KA
Sbjct: 476 KA 477
>gi|294464732|gb|ADE77873.1| unknown [Picea sitchensis]
Length = 230
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 171/263 (65%), Gaps = 44/263 (16%)
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
LS R ++ LRALVVLPTRDLA+QV
Sbjct: 2 LSRRTLQYLRALVVLPTRDLAIQV------------------------------------ 25
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV-LQELQSAV 212
K VF AIAPAVGLSVGLAVGQ+S+A + ++ I+ + DP+ + + +S+V
Sbjct: 26 ---KTVFDAIAPAVGLSVGLAVGQTSVAADTAQFIRHRRNSMQNLSDPKGMEMSTSESSV 82
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD-NENR 271
DIL+ATPGRLMDHI++TRGFTLEHLCYLVVDETDRLLREAYQ WLP VL +S+ +ENR
Sbjct: 83 DILIATPGRLMDHISSTRGFTLEHLCYLVVDETDRLLREAYQYWLPNVLSTAQSNHHENR 142
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
+ S+ + + G + T RR + RGFK K PR++KM+LSATLT+DP+KL+QL LH PL
Sbjct: 143 GATWSS-VSARLGPITTFRRDVLGRGFKTKTDPRVMKMILSATLTRDPSKLSQLALHQPL 201
Query: 332 FL--TTGETRYKLPERLESYKLI 352
FL T E RYKLPE+LE Y L+
Sbjct: 202 FLASTGAEKRYKLPEQLEIYTLV 224
>gi|195428034|ref|XP_002062080.1| GK17342 [Drosophila willistoni]
gi|194158165|gb|EDW73066.1| GK17342 [Drosophila willistoni]
Length = 681
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 239/488 (48%), Gaps = 92/488 (18%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKT 83
L L L + AL+ M I FPVQ AV W + P F RD+C+++PTGSGKT
Sbjct: 141 LQQLGYLKSFTRQALKQMKIKRPFPVQRAVIPWILEAHAKPEPFRPRDICVSAPTGSGKT 200
Query: 84 LSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCV 143
L++A+PIVQ LS R +RALVVLP +LALQV C K
Sbjct: 201 LAFAIPIVQLLSQRVECKVRALVVLPVAELALQVYKVISSLCSK---------------- 244
Query: 144 QFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 203
L V L Q + DE +L++ L G Y
Sbjct: 245 -----------------------TELEVCLLSKQHRLEDEQEKLLE---LYKGKYY---- 274
Query: 204 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 263
S VDI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL +
Sbjct: 275 ------SKVDIVVTTPGRLVDHLHATKGFCLKSLQFLVIDEADRIMDAVFQNWLYHLDTH 328
Query: 264 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 323
R + S T P + L + F +P+ K++ SATL+QDP KL
Sbjct: 329 VRETTDQLLS--GTQAPLCYAELLS--------SFGKQPH----KLLFSATLSQDPEKLQ 374
Query: 324 QLDLHHPLFLTT-----------GET---------RYKLPERLESYKLICESKLKPLYLV 363
L L P TT G+T +Y P L + E +LKPL L
Sbjct: 375 NLRLFQPKLFTTVLNLPVFQLNEGKTDSVQDQIVGKYTTPAELTEQYCVTEMRLKPLTLF 434
Query: 364 ALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFRE 422
AL+Q ++ + F++S ++ +RL +L F I ++E SG RS TL F
Sbjct: 435 ALIQQYKWKRFLCFSNSADTANRLAFVLKILFQSYDITVEELSGNMSALERSTTLNNFAR 494
Query: 423 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 482
GKI L+ SDA+ RG+DV V+ V++Y+ +IKTYIHR GRTARAG+LG TLL +
Sbjct: 495 GKINGLICSDALARGIDVADVDIVISYEAARHIKTYIHRVGRTARAGKLGTAVTLLSDQD 554
Query: 483 VKRFKKLL 490
+ +FKK+L
Sbjct: 555 LDQFKKML 562
>gi|170098937|ref|XP_001880687.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644212|gb|EDR08462.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 510
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 245/490 (50%), Gaps = 99/490 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVW-----QETIGPGLF-----ERDLCINSPTGSGKTL 84
L +++ L+++GI+ LF VQ ++ + + L+ RD+CI++PTGSGKTL
Sbjct: 69 LSAKIRKRLKSIGITELFAVQTSLLPFLLPHDPLARRLYLPYDPPRDVCISAPTGSGKTL 128
Query: 85 SYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQ 144
+Y LPIV+TLS R V LRALVVLPTRDL
Sbjct: 129 AYVLPIVETLSPRIVTRLRALVVLPTRDL------------------------------- 157
Query: 145 FDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 204
+ QV++ F AI GL +G A GQ+S A E ++L+
Sbjct: 158 --------VSQVRETFEAITNNRGLKIGTATGQNSFAHEQAQLVN--------------- 194
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 264
L S VDIL+ TPGRLMDH+ T F+L+HL +LV+DE DRLL +++Q WL VL T
Sbjct: 195 -NVLPSKVDILICTPGRLMDHLMGTPNFSLQHLRFLVIDEADRLLAQSFQDWLSRVLAAT 253
Query: 265 RSDNENRFSDASTF---------LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 315
R ++ S +S L AF L+ + + ++ K++ SATL
Sbjct: 254 RPHVKSSSSSSSPSPHSLPESDGLSPAF--LQRLSLPDIPAFQHEEKETSCQKLLFSATL 311
Query: 316 TQDPNKLAQLDLHHPLFL-----TTGET-----RYKLPERLESYKLICESKLKPLYLVAL 365
T+DP K+A L+L P + T GE Y +P L ++ ++ S KPL L
Sbjct: 312 TRDPAKIAALNLRDPKYFIVQSRTDGEELHVLENYSMPPTL-THMIVSNSSKKPLVFFHL 370
Query: 366 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK------------IKEYSGLQRQSVR 413
+ +VFT S +ST RL L F E R++ + YS S R
Sbjct: 371 IHRQKMRNVLVFTKSADSTTRLVRLFEFFEEARLEKEPGTAGEESIIARAYSSDLPPSER 430
Query: 414 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 473
L F+ +I +L+ SD ++RG+D+ V++VVNYD P ++ Y+HR GRTARAG+ G
Sbjct: 431 KAILDQFKAQQIHILICSDLISRGIDITHVSHVVNYDVPVDMRKYVHRVGRTARAGRAGD 490
Query: 474 CFTLLHKDEV 483
+TL+ + EV
Sbjct: 491 AWTLVEEQEV 500
>gi|389750259|gb|EIM91430.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 725
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 236/511 (46%), Gaps = 130/511 (25%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFER----------DLCINSPTGSGKTLSYALPIVQ 92
L+ +GI LF VQ + + G F+R D+C+++PTGSGKTL+Y LPI++
Sbjct: 260 LKELGIEELFAVQTTLLPLLLPSGPFKRSLYLPYDPPQDICVSAPTGSGKTLAYVLPIIE 319
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
LS R V LRAL+VLPTRDL
Sbjct: 320 ILSARIVTRLRALIVLPTRDL--------------------------------------- 340
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
+ QV++ F AI GL +G A GQ S A E ++L V + V
Sbjct: 341 VTQVRETFEAIGKGRGLKIGTATGQHSFAHEQNQL----------------VADKSAHKV 384
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
D+L+ TPGRL+DH+N T F+L+HL +LV+DE DRLL +++Q WL VL TR
Sbjct: 385 DVLICTPGRLIDHLNGTPNFSLQHLRFLVIDEADRLLAQSFQDWLAQVLAATRP------ 438
Query: 273 SDASTFLPSA----FGSLKTIRRCGVERGFKDKPYPRLV--------------------- 307
T PSA GS + G++ + D P +
Sbjct: 439 PPVPTHDPSAPASTSGSFTVPQDNGIDIPYPDALSPSFLHLLRPPSFAMITDIDTPRESS 498
Query: 308 --KMVLSATLTQDPNKLAQLDLHHPLFL-----TTGE-------TRYKLPERLESYKLIC 353
K++ SATL DP K+ L+L ++ GE R+ +P L + L+
Sbjct: 499 CQKLLFSATLMSDPGKIKALELRDAKYIVVQGQANGEGVLGVVMERFSMPATLTEHMLVV 558
Query: 354 ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK------------- 400
S KPL L L+ + + +VFT S EST RL L F RI+
Sbjct: 559 PSSQKPLMLFHLVHAHNVKNALVFTKSAESTGRLVRLFQFFERARIQAQSQSSMDVDRSG 618
Query: 401 -------IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
+K YS + R L+ R+G + +LV SD ++RG+D+ V +VV+YD P
Sbjct: 619 QDAREVVVKAYSSDLGAAERRGLLEKLRDGTVDILVCSDLVSRGIDISIVQHVVSYDAPV 678
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
I+ Y+HR GRTARAG+ G +TL+ + EV+
Sbjct: 679 DIRKYVHRVGRTARAGRDGDAWTLVEEQEVR 709
>gi|325188363|emb|CCA22900.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 496
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 244/470 (51%), Gaps = 89/470 (18%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
D CI++PTGSGKT +Y +PI+ L R + LRAL+V+PTRDLA QV
Sbjct: 61 DFCISAPTGSGKTFTYLIPILLQLQQRIICRLRALIVVPTRDLATQV------------- 107
Query: 131 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 190
H +A + + L + GQ++ E
Sbjct: 108 -----HQVA---------------------SVLCGGTKLKCAVVTGQANFGQE------- 134
Query: 191 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 250
+ +L + S +DIL+ATPGRL+DH+ T GFTL+HL +L+VDE DRLL
Sbjct: 135 -----------QRLLSDTHSGIDILIATPGRLVDHLEQTNGFTLQHLQFLIVDEADRLLT 183
Query: 251 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL--VK 308
++YQ W+ V Q + +S S +L IR G ++ R+ ++
Sbjct: 184 QSYQDWIAKVYQ-------SVYSTVSAVPLRPEDNLVAIRTIRTANGIQNHKQIRVPFIR 236
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFL----TTGE---------------TRYKLPERLESY 349
++LSATLT++P+KLA + +H+ L + GE + Y+ PE+LE +
Sbjct: 237 VLLSATLTENPSKLALIGMHYARVLKIKGSEGEDSMPKAQTECELDADSVYETPEKLEEW 296
Query: 350 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN----HFGELRIKIKEYS 405
+ C+S KPL L+ LL + ++ ++FTSSV +THRL LL + + ++EYS
Sbjct: 297 MIECDSDSKPLRLIQLLLTFKDQMTLIFTSSVNATHRLTRLLQLVFKEHSDDDVGVQEYS 356
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
R + ++G ++LV SDAM RGMD++ V NV+NYD P++IKTYIHRAGR
Sbjct: 357 SSLTLQQRRTLVAKCKKGLYRILVCSDAMARGMDLDDVVNVINYDVPSFIKTYIHRAGRA 416
Query: 466 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
ARAG+ GRC TL+ + + K +++LQKA +P I+ L PVY
Sbjct: 417 ARAGRFGRCVTLVKRGQTKGLQRMLQKAKKKKLLAFPLPPEEIQQLVPVY 466
>gi|195495021|ref|XP_002095090.1| GE22191 [Drosophila yakuba]
gi|194181191|gb|EDW94802.1| GE22191 [Drosophila yakuba]
Length = 681
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 248/530 (46%), Gaps = 105/530 (19%)
Query: 5 KKKSMPVLPWMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK M + W+ P + E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVEMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W + P RD+C+++PTGSGKTL++A+PIVQ LS R +RAL+VLP
Sbjct: 165 KQVIPWILEAQAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVECKVRALIVLPV 224
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
+LALQV C K L
Sbjct: 225 AELALQVYRVVSALCSKT---------------------------------------ELE 245
Query: 171 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 230
V L Q + DE +L+++ K G Y S DI+V TPGRL++H++AT+
Sbjct: 246 VCLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPGRLVEHLHATK 292
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
GF L+ L +LV+DE DR++ +Q WL + + + A T P + L++
Sbjct: 293 GFCLKSLTFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQS-- 348
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------ 338
F +P+ K++ SATL+QDP KL L L P TT T
Sbjct: 349 ------SFGKQPH----KLLFSATLSQDPEKLQNLRLFQPRLFTTVLTMPVLKDVTEGDA 398
Query: 339 -------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
RY P L + E +LKPL + AL++ ++ + FT+S +
Sbjct: 399 DTEANTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVYALVEKYQWKRFLCFTNSSDQAS 458
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
RL +L+ + K+ E SG +R TL+ F GKI LV SDA+ RG+DV V+
Sbjct: 459 RLTFVLSLLFQNGTKVAELSGNLSAKIRKTTLRNFSAGKINGLVCSDALARGIDVADVDV 518
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
V++Y+ P +I TYIHR GRTARAG+ G TLL ++ FKK+L AD
Sbjct: 519 VLSYEIPRHITTYIHRVGRTARAGRKGTAVTLLTDKDMTLFKKILSDADK 568
>gi|405968018|gb|EKC33126.1| ATP-dependent RNA helicase DDX51 [Crassostrea gigas]
Length = 1179
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 247/556 (44%), Gaps = 140/556 (25%)
Query: 11 VLP-WMRSP--VDVSLFEDCPL-DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG-- 64
VLP W+ SP + L + L LDP + + L+ I FPVQ+ V E +
Sbjct: 212 VLPDWLSSPNVIASDLKQKTTLVSEFKGLDPDIHLNLKENKIDYFFPVQMQVIPEILDTV 271
Query: 65 --------PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
G D+C+++PTGSGKTL++ LPIVQ L +R + +RA+VVLP RDLA+Q
Sbjct: 272 RYGFVLGRAGFRPPDICVSAPTGSGKTLAFVLPIVQALKSRVLCRIRAMVVLPVRDLAVQ 331
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
V VF L VG+ VG
Sbjct: 332 VFK---------------------------------------VFLQYTKGTNLKVGMIVG 352
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
Q + E L+++ + L+S VDI+VATPGRL+DHIN T GF+L
Sbjct: 353 QKQFSVEQHALVRQR-------------VGGLESKVDIVVATPGRLVDHINKTPGFSLTD 399
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L +LV+DE DR++ Q WL V EN PS SL C
Sbjct: 400 LRFLVIDEADRIMEHVKQDWLSHV--------ENAVFSGGRTAPS---SLNVYNSC---- 444
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT--------------------- 335
K + L K++ SATL+Q+P KL QL+L P T+
Sbjct: 445 ----KHHMPLQKLLFSATLSQNPEKLQQLNLFQPKLFTSVVDGGSLPRPLESEGEGNKDD 500
Query: 336 ----------GETR------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 379
GE + Y P L+ Y + E+ KPL ++ L +L
Sbjct: 501 QVTDRLSGPGGEVKGQFVGKYTTPLGLKEYTVEVEAFEKPLVILHFLHNL---------- 550
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
+L L+ FG I + E + + S RSK LK F+ G I +L+ SDAM RGMD
Sbjct: 551 ------QLYHLIRLFG--GINVAEITAKLQASRRSKVLKKFQNGSIDILICSDAMARGMD 602
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 499
++ V V++YD P YIKTYIHR GRTARAG+ G +LL K E FK + ++A
Sbjct: 603 IDDVQYVISYDPPPYIKTYIHRVGRTARAGKEGTALSLLQKKEFHHFKTMTKEAGKTYIE 662
Query: 500 IHSIPSSLIESLRPVY 515
+ S +E L Y
Sbjct: 663 KFKVHSKEMEGLLEKY 678
>gi|195376467|ref|XP_002047018.1| GJ12159 [Drosophila virilis]
gi|194154176|gb|EDW69360.1| GJ12159 [Drosophila virilis]
Length = 680
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 243/497 (48%), Gaps = 104/497 (20%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGPGLFE-RDLCINSPTGSGKT 83
+ LP L+ L+ M I LFPVQ AV W + P F RD+C+++PTGSGKT
Sbjct: 145 IKQLPYLEKNTCSVLKQMKIKRLFPVQTAVIPWILEAQAKPEPFRPRDICVSAPTGSGKT 204
Query: 84 LSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
L++A+PIVQ L+ R V+C +RALVVLP +LALQV
Sbjct: 205 LAFAIPIVQLLAKR-VQCKVRALVVLPVAELALQVYK----------------------- 240
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
VF A+ L V L Q + DE +L+++ K G+ Y
Sbjct: 241 ----------------VFNALCSKTELEVCLLSKQHRLEDEQEKLLEQYK---GVYY--- 278
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
S VDI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL +
Sbjct: 279 -------SKVDIVVTTPGRLVDHLHATKGFCLKSLQFLVIDEADRIMDAVFQNWLYHLDT 331
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE--RGFKDKPYPRLVKMVLSATLTQDPN 320
R+ + + L C E + +P+ K++ SATL+QDP
Sbjct: 332 HVRTTTDQLLTGVQAPL------------CYQELLNSYGKQPH----KLLFSATLSQDPE 375
Query: 321 KLAQLDLHHPLFLTTGET--------------------------RYKLPERLESYKLICE 354
KL L L P TT T +Y P L + E
Sbjct: 376 KLQNLRLFQPKLFTTVLTMPALQLGLGNAEQPEQGVEQSSQFIGKYTTPAELTEQYCLTE 435
Query: 355 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVR 413
+LKPL L A++ G ++ + FT+S ++ +RL +L FG +++E S ++R
Sbjct: 436 MRLKPLTLYAMVLLNGWKRFLCFTNSADTANRLAFVLQQLFGGSPTRVEELSAKMSAAMR 495
Query: 414 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 473
++ L F G I L+ SDA+ RG+DV V+ VV+Y+ P +IKTYIHR GRTARAG G
Sbjct: 496 AQRLTEFARGSIHGLICSDALARGIDVPNVDIVVSYEAPRHIKTYIHRVGRTARAGHKGT 555
Query: 474 CFTLLHKDEVKRFKKLL 490
TLL + +FKK+L
Sbjct: 556 AITLLTDKDQAQFKKML 572
>gi|320169870|gb|EFW46769.1| DEAD-box ATP-dependent RNA helicase 1 [Capsaspora owczarzaki ATCC
30864]
Length = 866
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 272/583 (46%), Gaps = 149/583 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPG---LFERDLCINSPTGSGKTLSYALPIV 91
LDPR+ AL MGI SLFPVQ ++ E +G + DLC++SPTGSGKT+++A+PIV
Sbjct: 266 LDPRVVRALTKMGIQSLFPVQASLLPEILGSASSAVHPGDLCVSSPTGSGKTMAFAIPIV 325
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF- 150
LS R V LRAL++ PTR+LA QV K++F S+A+ +L+
Sbjct: 326 NKLSTRVVPRLRALILQPTRELAAQV---------KSVF-----DSLAQFTPLTTALITG 371
Query: 151 -ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
+SL +D+ AA AP+ +S +AD + L +G ++
Sbjct: 372 QLSLAAEQDLLAAGAPS----------RSVLADSVLALAG--NRSSGSAQQATPIV---- 415
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
D++VATPGRL+DH+N L+HL YLV+DE DRLL ++Y WLP VL R+
Sbjct: 416 -LCDVVVATPGRLVDHLNCNPAL-LDHLEYLVLDEADRLLSQSYSDWLPRVL-AGRTTRH 472
Query: 270 NRFSDASTFLPSA--FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL-- 325
R + S+ SA G + G + + K++ SATLT +P K+A L
Sbjct: 473 QRAAAQSSNNASATLAGESGGVGSAGYGMVNNSSSHSIMRKLLFSATLTNNPEKIAALHL 532
Query: 326 ----------------------------------DLHHPLFLTTGET--RYKLPERLESY 349
D PLF G+ R+ LP L
Sbjct: 533 VFPRYFVAAPNATLSVKPVAGAGADAATAMDTTADGQEPLFDADGDNAARFTLPATLTQE 592
Query: 350 KLICESKLKPLYLV-----ALLQSLG------EEKC-------IVF-------------- 377
++C+ KPL L L+++ G +E +VF
Sbjct: 593 MIVCQLADKPLALAQRLYGTLIRAAGKTLPADDEAAATTTPHRVVFASDDEEDADPSNEE 652
Query: 378 -----------------------TSSVESTHRLCTLL-----NHFGELR-IK----IKEY 404
T+SVESTHRL LL ELR I+ + E+
Sbjct: 653 ASAKKRGTPLSRAIKALPQALVFTASVESTHRLALLLRNLLKQALPELRDIQLGSLVAEF 712
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
S + R K L FR ++ VL+ SDAM RGMD+E V V+NYD P Y KTY+HR GR
Sbjct: 713 SSSLSKDDRGKMLNRFRTNQVHVLICSDAMARGMDIENVAEVINYDVPVYFKTYVHRVGR 772
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 507
TARAG+ G+ TLL +EV FK++L KA HS+P+ +
Sbjct: 773 TARAGRSGQALTLLRSEEVAAFKRMLGKAG------HSLPAKI 809
>gi|66800335|ref|XP_629093.1| hypothetical protein DDB_G0293740 [Dictyostelium discoideum AX4]
gi|74896742|sp|Q54BD6.1|DDX51_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx51; AltName:
Full=DEAD box protein 51
gi|60462461|gb|EAL60682.1| hypothetical protein DDB_G0293740 [Dictyostelium discoideum AX4]
Length = 563
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 260/506 (51%), Gaps = 88/506 (17%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L+ I +LFPVQ V T G D+C+ +PTGSGKTL+YA+P+VQ + R V
Sbjct: 30 LKEQSIINLFPVQQEIVPFINRTEG-----HDICVCAPTGSGKTLAYAIPLVQKIVKRVV 84
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +R V++PT DL +QV +
Sbjct: 85 RRVRVAVIVPTHDLVIQV---------------------------------------EKT 105
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
F +I L V L++G E LIK Y +S VDI+V+TP
Sbjct: 106 FQSIIKGTDLVV-LSLGVKPFHIEQKLLIKNHSYGEHALY---------ESLVDIIVSTP 155
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE-NRFSDASTF 278
GR++DHIN T GFTL++L YLV+DE DRLLR+++Q WL V+ T ++ N+ +
Sbjct: 156 GRIVDHINETLGFTLKYLNYLVIDEADRLLRQSFQDWLEIVIDSTNQHSDLNQQQEEQLI 215
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYP---------RLVKMVLSATLTQDPNKLAQLDLHH 329
++ G ++ + KD +LVK++LSAT+T +P+K++ L L+
Sbjct: 216 KYNSKGDIELFEKS---ISLKDNNNQMNHLCWSEFKLVKLLLSATMTYNPSKISLLQLNA 272
Query: 330 PLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALL-QSL--------GEEKCIVF 377
PLF TT +T+ Y +P L+ +I KPL L+ ++ +SL ++K I F
Sbjct: 273 PLFFTTSKTKEIKYSMPSTLKECYIISNGDQKPLVLLNIIYESLLKNNANGENKKKIICF 332
Query: 378 TSSVESTHRLCTLLNHFGE---LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
T SV+ THRL TLL G+ L+ +EYS R+ L F+ +I +L+ SD M
Sbjct: 333 TKSVDITHRLNTLLKLIGQVDKLKFTCEEYSSSLSTVERADLLSRFKLNQIDILICSDIM 392
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
+RGMD++ ++ V+NY+ P I Y+HR GRTARAG G +T++ K E+K + +++KA+
Sbjct: 393 SRGMDIQDIDVVINYNTPPNITLYVHRVGRTARAGNFGVSYTIVDKSEIKYYISMMKKAE 452
Query: 495 NDSCPIHSI--PSSLIESLRPVYKSG 518
S +H + ++ E + YK G
Sbjct: 453 R-SQTLHCLKWKPNVYEKFQSSYKLG 477
>gi|330793373|ref|XP_003284759.1| hypothetical protein DICPUDRAFT_148567 [Dictyostelium purpureum]
gi|325085359|gb|EGC38768.1| hypothetical protein DICPUDRAFT_148567 [Dictyostelium purpureum]
Length = 565
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 251/473 (53%), Gaps = 75/473 (15%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFE---RDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L + ++ LFPVQ + I P + D+C+ +PTGSGKTL+YA+P+VQ + R V
Sbjct: 24 LNEISVTGLFPVQ-----QEIVPFISRAEGHDICVCAPTGSGKTLAYAIPLVQKIVKRVV 78
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +R +V++PT DL +QV +
Sbjct: 79 RRIRVVVIVPTHDLVIQV---------------------------------------EKT 99
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
F +I L V ++G E L+K Y +S VDI+V+TP
Sbjct: 100 FQSIIKGTDLIVQ-SLGVKPFHVEQKLLVKNHSYGEHALY---------ESLVDIIVSTP 149
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL+DHIN T+GFTL++L YLV+DE DRLLR+++Q WL V+ T + N + + + F+
Sbjct: 150 GRLVDHINETQGFTLKYLNYLVIDEADRLLRQSFQDWLEIVIDSTNNLNNDIGNSNNNFI 209
Query: 280 P-SAFGSLKT-------IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
+ G+++ IR + +LVK++LSAT+T +P+K++ L L+ PL
Sbjct: 210 KYNEKGNIEINELPINIIRDNNNQENHLCWSEFKLVKLLLSATMTYNPSKISLLQLNAPL 269
Query: 332 FLTTGETR---YKLPERLESYKLICESKLKPLYLVAL----LQSLGEEKCIVFTSSVEST 384
F TT +T+ Y +P L+ +I KPL L+ + L++ +K I FT SV+ T
Sbjct: 270 FFTTSKTKEIKYTMPSTLKESYIITNPDQKPLVLLNIIYETLKNDSNKKIICFTKSVDIT 329
Query: 385 HRLCTLLNHFG---ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
HRL +LL G ++ +EYS + RS L F+ +I VL+ SD M+RGMD+
Sbjct: 330 HRLNSLLKLIGSVDNIKFTCEEYSSALSTTERSSLLNRFKSNEINVLICSDIMSRGMDIS 389
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
++ V+NY+ P I Y+HR GRTARAG+ G +T++ K E++ + +++KA+
Sbjct: 390 DIDVVINYNSPPNITLYVHRVGRTARAGKHGFSYTIIDKQEIRYYISMMKKAE 442
>gi|194872386|ref|XP_001973017.1| GG15853 [Drosophila erecta]
gi|190654800|gb|EDV52043.1| GG15853 [Drosophila erecta]
Length = 687
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 253/546 (46%), Gaps = 107/546 (19%)
Query: 5 KKKSMPVLPWMRSPVDVSLFEDCPLDHLPC---------LDPRLKVALQNMGISSLFPVQ 55
KK M + W+ P + P D +P L+ AL+ M I LFPVQ
Sbjct: 105 KKVEMQLPNWLAHPTIIEGGSLQPEDEIPASEAIDQLDYLEKYTCEALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RAL+VLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVECKVRALIVLPV 224
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
+LALQV K C K L
Sbjct: 225 AELALQVYRVISKLCSKT---------------------------------------ELE 245
Query: 171 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 230
V L Q + DE +++++ K G Y S DI+V TPGRL++H++AT+
Sbjct: 246 VCLLSKQHKLEDEQEKVVEQYK---GKYY----------SKADIVVTTPGRLVEHLHATK 292
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
GF L+ L +LV+DE DR++ +Q WL + + + A T P + L++
Sbjct: 293 GFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQS-- 348
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT------------GET 338
F +P+ K++ SATL+QDP KL L L P TT GE
Sbjct: 349 ------SFGKQPH----KLLFSATLSQDPEKLQNLRLFQPRLFTTVLTMPVLKDITEGEA 398
Query: 339 -------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
RY P L + E +LKPL + AL++ ++ + FT+S +
Sbjct: 399 DTEAHTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQAS 458
Query: 386 RLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
RL +L F + + E SG VR + LK F GKI L+ SDA+ RG+DV V+
Sbjct: 459 RLTFVLKVLFKKYSTIVSELSGNLSARVRKEKLKDFSAGKINGLICSDALARGIDVADVD 518
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND-SCPIHSI 503
V++Y+ P +I TYIHR GRTARAG+ G TLL + ++ FKK+L AD + IH
Sbjct: 519 VVLSYETPRHITTYIHRVGRTARAGRKGTAVTLLTEQDMALFKKILSDADKELGEEIHVS 578
Query: 504 PSSLIE 509
P I+
Sbjct: 579 PDIEIQ 584
>gi|340368286|ref|XP_003382683.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Amphimedon
queenslandica]
Length = 640
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 245/495 (49%), Gaps = 95/495 (19%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETI----GP------GLFERDLCINSPTGSGKT 83
L+P + L M ++SLFPVQ V E + GP G D+CI +PTG GKT
Sbjct: 168 ALNPIITDNLHKMSVTSLFPVQCVVLPELLSSSHGPLLSTVSGAPPSDMCICAPTGCGKT 227
Query: 84 LSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCV 143
LSY +PIV +L NR R L+ALVV+P++DLALQV
Sbjct: 228 LSYVVPIVSSLLNRITRELKALVVVPSKDLALQV-------------------------- 261
Query: 144 QFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG--QSSIADEISELIKRPKLEAGICYDP 201
+VF +++ + +G AVG +S + E +LI + P
Sbjct: 262 -------------YNVFVSVSKGTRVRIG-AVGSQNTSFSVEQKQLISH--------HGP 299
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
AVD+LVATPGRL+ H+ T +L L YLV+DE DR+ ++Y WL TV+
Sbjct: 300 ---------AVDVLVATPGRLVRHLQETPFLSLASLRYLVIDEADRIFEQSYHNWLNTVM 350
Query: 262 QLTRSDNENRFSD-ASTFLPSAFGSL-------KTIRRCGVE------RGFKDKPYPR-- 305
R + + +S+ +P + L ++ G+ D YP
Sbjct: 351 DSIRETHSSGHCPLSSSCIPRMYPELWKPSFSKSLLKHKGMHTDSQLSSSINDLIYPAAA 410
Query: 306 -LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK------LPERLESYKLICESKLK 358
L K++ SATL+ DP +L L L+ P T + LP L+ Y + C S K
Sbjct: 411 PLQKLLFSATLSLDPEQLHLLQLYRPKLFTATPALQEDLGQSILPSTLKEYSISCSSDYK 470
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
PL L+ L+ + + + FT S ESTHRL LL E + E SG Q +++ +K
Sbjct: 471 PLVLLHLILTFDHHRILCFTHSRESTHRLTLLLK---EYDAPVAEISGDLSQEKKNELIK 527
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+I+ LV SD M RGMD+ G++ V+NYD P++ ++Y+HR GRTARAG G +TL
Sbjct: 528 KLTGKEIKALVCSDGMARGMDIPGIDCVINYDVPSHFRSYLHRVGRTARAGAEGAAYTLN 587
Query: 479 HKDEVKRFKKLLQKA 493
+EV ++++++++A
Sbjct: 588 TFEEVHKWQRMIREA 602
>gi|403159589|ref|XP_003320191.2| hypothetical protein PGTG_01103 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168160|gb|EFP75772.2| hypothetical protein PGTG_01103 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 893
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 251/559 (44%), Gaps = 167/559 (29%)
Query: 43 LQNMGISSLFPVQVAV----------WQETIGPGLFE-----RDLCINSPTGSGKTLSYA 87
L+ + +L VQ+AV + T L+ RDLC+++PTGSGKTLSY
Sbjct: 346 LKQLEFENLLAVQIAVFSLLMPPLSAYSNTPASSLYPTRRPPRDLCVSAPTGSGKTLSYI 405
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
+PIV+TLS+R V LRAL+VLPTRDL LQV
Sbjct: 406 VPIVETLSSRVVCRLRALIVLPTRDLVLQV------------------------------ 435
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
K+ F + GL + GQ S E ++L G D
Sbjct: 436 ---------KNTFDCFSKGTGLKAAIITGQHSFTKEQAQL--------GCSRD------G 472
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
L+ +VD+L+ATPGRL+DH+N T GF+L+HLC+LV+DE D+LL ++ QAWL VL + +
Sbjct: 473 LEGSVDVLIATPGRLVDHLNHTSGFSLQHLCFLVLDEADQLLNKS-QAWLHQVLSTSAAS 531
Query: 268 NENR--------------------FSDASTFLPSAF--GSLKTIRRCGVERGFKD----- 300
+ F + F PS G L T+ + G +
Sbjct: 532 EVPKPMEHTEPIKSSFNHPKSLLGFRSSEPFEPSHLLDGPLSTVEMHNQDHGLTENLPIE 591
Query: 301 -------KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------------ETR- 339
+P+ R+ ++ SATL +DP KLA L L HP+F+ +TR
Sbjct: 592 TYNPCRLRPF-RI--LLFSATLRRDPVKLAHLGLRHPVFVKISSSSTTLVVDGDLDQTRR 648
Query: 340 -------------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
Y LP+ L+ Y ++ + LKPL LLQS EK + F S++ R
Sbjct: 649 ESGTIDFVDQLNGYCLPKTLKQYLIVTRTDLKPLVFFKLLQSQRIEKALCFCKSIDGARR 708
Query: 387 ---LCTLL-NHFGELR------------------------------IKIKEYSGLQRQSV 412
LC L+ F L+ K++ +S
Sbjct: 709 LTGLCRLMAEQFQALKSPNSDDPESNPKQKDQDQKDQKDDVDLVKLCKVECFSSDLSPVE 768
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R K L F+ G+I +L+ SD + RG+D+ GV NV+NYD P IK Y+HR GRTARA + G
Sbjct: 769 RKKLLNKFQSGEINMLICSDIIARGIDITGVQNVINYDSPIDIKKYVHRVGRTARANEHG 828
Query: 473 RCFTLLHKDEVKRFKKLLQ 491
R F+L+ E K K L+
Sbjct: 829 RAFSLVESQEAKFVKAFLK 847
>gi|401883807|gb|EJT47994.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 743
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 246/490 (50%), Gaps = 90/490 (18%)
Query: 27 CPLDHLPCLDP---RLKVALQNMGISSLFPVQVAVWQETIGPGL----FER--DLCINSP 77
PL L P R + L+++GIS F VQ A+ + + L FE+ D +++P
Sbjct: 286 MPLSELTETTPISERTQKRLKDLGISEFFAVQTALLPKLLRLPLTPLPFEKLSDYLVSAP 345
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
TGSGKTL+Y +PIV+ LS R V LRAL+VLPTRDL
Sbjct: 346 TGSGKTLAYTVPIVEILSKRIVTRLRALIVLPTRDL------------------------ 381
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
+ QVK+ ++ GL+ A Q+ + D
Sbjct: 382 ---------------VTQVKETLEEVSKGSGLTHSFAHEQTLLVDGA------------- 413
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 257
QS +DIL+ATPGRLMDH+ T+GFTL+HL +LV+DE DRLL ++Q WL
Sbjct: 414 -----------QSKLDILIATPGRLMDHLAMTKGFTLQHLRFLVIDEADRLLSSSFQNWL 462
Query: 258 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG-FKDKPYPRLVKMVLSATLT 316
VL R ++ ++ S +L G+ RG F+ K++ SATLT
Sbjct: 463 SQVLDQCRP---HKHANGEELAGSQV-ALAWSEPMGLSRGDFEGSQVIPSSKLLFSATLT 518
Query: 317 QDPNKLAQLDLHHPLFLTTGETR--------YKLPERLESYKLICESKLKPLYLVALLQS 368
+DP K+AQL+L P + TR ++LP L +I +LKPL L+ LL S
Sbjct: 519 RDPAKVAQLNLTSPEYYIVSSTRSITQIGQAFELPSSLTERSIILPPQLKPLNLLYLLHS 578
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHF-----GELRIKIKEYSGLQRQSVRSKTLKAFREG 423
G IVFT SV++ RL LL +F G ++ + ++ + S R L F G
Sbjct: 579 EGAAPSIVFTKSVDAASRLVRLLTYFEQAYIGGKKLSVASFTRDMKPSERKTMLSDFAAG 638
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
K+ VLV SD ++RG+D+ V +VV+YD P + Y+HRAGRTARAG+ G +T++ K E
Sbjct: 639 KLDVLVCSDLISRGIDLPSVAHVVSYDVPLDMTKYVHRAGRTARAGRDGTVWTMVEKQEA 698
Query: 484 KRFKKLLQKA 493
K FK +L A
Sbjct: 699 KHFKDMLAAA 708
>gi|440801982|gb|ELR22922.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 689
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 233/474 (49%), Gaps = 110/474 (23%)
Query: 31 HLPCLDPRLKVAL-QNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALP 89
H+ L P + L Q GI+ FP+Q V +P
Sbjct: 249 HVKGLHPTIVQNLEQQFGIAQFFPIQAQV-----------------------------IP 279
Query: 90 IV--QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
++ TL NR V LRALV+LP RDLALQV
Sbjct: 280 VILRSTLLNRVVVRLRALVILPNRDLALQV------------------------------ 309
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK--------------RPKL 193
K VF + L V + VGQSS + +L++ +
Sbjct: 310 ---------KSVFDLLCEGTDLKVEIVVGQSSFRKDQEKLVQGEEGPDAADLRGASTSEA 360
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
EAG P L+EL VDIL+ TPGRLMD +N TRGFTL+HL +LV+DE DRLL +++
Sbjct: 361 EAGDRSAP--ALKEL---VDILICTPGRLMDLLNQTRGFTLQHLRFLVIDEADRLLDQSF 415
Query: 254 QAWLPTVLQLTRSDNENRF------SDASTFL---PSAFGSLKTIR-----RCGVERGFK 299
Q WL VLQ T S + R +D L L ++R +
Sbjct: 416 QDWLNKVLQATHSSTQGRVYGCVDETDQEAHLRIDARTMRQLTSVRSVHLSSTALHSIIP 475
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-YKLPERLESYKLICESKLK 358
++P P L K++ SATLT +P K+A L L++P F + T YK+PE+L+ Y +IC K
Sbjct: 476 EEPEP-LHKLLFSATLTNNPKKIAALRLNNPHFFSATSTGLYKMPEKLQEYMVICSLAYK 534
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
PL L+ LL+ ++ + FTSSVESTHRL LL G+ + EYS Q R++ ++
Sbjct: 535 PLVLLYLLEMFDFKRTLCFTSSVESTHRLYLLLTLMGQ--TGVAEYSSTLPQRKRTQIIE 592
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR--AGQ 470
F +G I+++++SDAM+RG+D+E V NV+NYD P +IKTY+HR A AGQ
Sbjct: 593 KFAKGDIKIVIASDAMSRGLDIEDVENVINYDVPPFIKTYVHRGPNCASRPAGQ 646
>gi|328867619|gb|EGG16001.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 506
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 231/467 (49%), Gaps = 82/467 (17%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L I L PVQ V T G D+ + +PTGSGKTLSY LPIVQ L R +
Sbjct: 16 LNEQNIVDLMPVQSEIVPFIARTEG-----HDILVAAPTGSGKTLSYVLPIVQKLHKRII 70
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LR LV+LPT DL +Q +
Sbjct: 71 RRLRVLVILPTHDLVIQT---------------------------------------EKT 91
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
F +I L V ++G S+ E S L+ Y+ ++ +S VDI+V TP
Sbjct: 92 FQSIIKGTNLVVE-SLGLKSLHLEQSLLVSS-------HYNQQNDSVYYESLVDIVVTTP 143
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST-- 277
GRL++H+N T GF L+HL YLV+DE DRLLRE+YQ WL V+ T+S +R + S
Sbjct: 144 GRLVEHLNETPGFNLQHLTYLVIDEADRLLRESYQFWLERVIDSTKSGTNDRSINLSNRG 203
Query: 278 ---FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
L S + SL G RL+K++LSAT+T +P K++ L+L+ PL+ +
Sbjct: 204 DMQILDSKYKSL------GSHLEHLSSKESRLIKLLLSATMTYNPEKISLLELNAPLYYS 257
Query: 335 T-----GETRYKLPERLESYKLICESKLKPLYLVALLQSL------GEEKCIVFTSSVES 383
+ T+Y +P+ L+ Y + C + KPL L+ ++ S+ + I FT++ E
Sbjct: 258 STKKKESSTKYSMPDSLQEYYVACPASQKPLSLIHIVYSILLKKKSDNARIICFTNNKEI 317
Query: 384 THRLCTLL---NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 440
RL TL+ N IK YS RS L++ + I +L+ SD ++RGMDV
Sbjct: 318 AQRLHTLIGLVNEINGYNIKPALYSSTVSTIERSHLLESLKNNHINLLICSDILSRGMDV 377
Query: 441 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
V+ V+NY+ P Y+HR GRTARAG+ G +T++ D V + K
Sbjct: 378 PNVDAVINYNLPLTAVLYVHRVGRTARAGKEGEAYTIV--DTVDKSK 422
>gi|357628805|gb|EHJ77980.1| putative ATP-dependent RNA helicase DDX51 [Danaus plexippus]
Length = 625
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 250/535 (46%), Gaps = 87/535 (16%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSLFED---CPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
E K K VLP W+ VS C +++ L L L + G++ FPVQ V
Sbjct: 112 EKKSKVERVLPYWLSHAYSVSKNLQTLTCKVENQSWLHNTLLTTLTSEGVTHFFPVQEQV 171
Query: 59 W----QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
Q+ P L D+C+++PTGSGKTLS+ LPI+Q L N +RALVVLP ++L
Sbjct: 172 IPFIIQQHQHPELLRPHDICVSAPTGSGKTLSFVLPIIQVLMNEIGHHIRALVVLPVQEL 231
Query: 114 ALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGL 173
A+QV KYC GL V L
Sbjct: 232 AIQVAQVFKKYCTN---------------------------------------TGLRVQL 252
Query: 174 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 233
G + + E ++++ + IC +DI+V T GRL++H+ T GF+
Sbjct: 253 LSGSTPLQKEQQQIMRFTETLKWIC------------EIDIIVCTAGRLVEHLQNTEGFS 300
Query: 234 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 293
L++L +LV+DE DR++ WL + + + +N S +P +R
Sbjct: 301 LKNLKFLVIDEADRIMDNIQNDWLYHMEKHIKMENH-----TSNKVPHLNWVGLNSQRSS 355
Query: 294 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL----------TTGETRYKLP 343
V K++ SATL+ DP L + L P + +Y P
Sbjct: 356 VH------------KLLFSATLSPDPELLEEWGLFQPKLFSAIPIQDHPDSNVSKKYTTP 403
Query: 344 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 403
+ L+ ++C ++ KPL L +K + FT+S +S HRL LLN + + +K+ E
Sbjct: 404 DELQEQYVVCSAEEKPLIFYYFFAELKWDKTLCFTNSSQSAHRLTVLLNIWSKGNLKVAE 463
Query: 404 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 463
S ++ R L+ F++ +I V++ +DA+ RG+D+ N V++YD P IKTY+HR G
Sbjct: 464 LSAALDRTSRELVLRKFKQSEINVIICTDALARGIDIPDCNYVISYDPPRNIKTYVHRVG 523
Query: 464 RTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
RT RAG++G T++ ++V+ FK +LQ P + + +++ L P Y++
Sbjct: 524 RTGRAGRIGNAVTIIVHNQVQMFKDILQSGGKSDIPQLEMQNDILQDLMPGYQNA 578
>gi|406696286|gb|EKC99578.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 743
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 244/490 (49%), Gaps = 90/490 (18%)
Query: 27 CPLDHLPCLDP---RLKVALQNMGISSLFPVQVAVWQETIGPGL----FER--DLCINSP 77
PL L P R + L+++GIS F VQ A+ + + L FE+ D +++P
Sbjct: 286 MPLSELTETTPISERTQKRLKDLGISEFFAVQTALLPKLLRLPLTPLPFEKLSDYLVSAP 345
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
TGSGKTL+Y +PIV+ LS R V LRAL+VLPTRDL
Sbjct: 346 TGSGKTLAYTVPIVEILSKRIVTRLRALIVLPTRDL------------------------ 381
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
+ QVK+ ++ GL+ A Q+ + D
Sbjct: 382 ---------------VTQVKETLEEVSKGSGLTHSFAHEQTLLVDGA------------- 413
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 257
QS +DIL+ATPGRLMDH+ T+GFTL+HL +LV+DE DRLL ++Q WL
Sbjct: 414 -----------QSKLDILIATPGRLMDHLAMTKGFTLQHLRFLVIDEADRLLSSSFQNWL 462
Query: 258 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG-FKDKPYPRLVKMVLSATLT 316
VL R + L + +L G+ RG F+ K++ SATLT
Sbjct: 463 SQVLDQCRPHKPANGEE----LAGSQVALAWSEPMGLSRGDFEGSQVIPSSKLLFSATLT 518
Query: 317 QDPNKLAQLDLHHPLFLTTGETR--------YKLPERLESYKLICESKLKPLYLVALLQS 368
+DP K+AQL+L P + TR ++LP L +I +LKPL L+ LL S
Sbjct: 519 RDPAKVAQLNLTSPEYYIVSSTRSITQIGQAFELPSSLTERSIILPPQLKPLNLLYLLHS 578
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHF-----GELRIKIKEYSGLQRQSVRSKTLKAFREG 423
G IVFT SV++ RL LL +F G ++ + ++ + S R L F G
Sbjct: 579 EGAAPSIVFTKSVDAASRLVRLLTYFEQAYIGGKKLSVASFTRDMKPSERKTMLSDFAVG 638
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
K+ VLV SD ++RG+D+ V +VV+YD P + Y+HRAGRTARAG+ G +T++ K E
Sbjct: 639 KLDVLVCSDLISRGIDLPSVAHVVSYDVPLDMTKYVHRAGRTARAGRDGTVWTMVEKQEA 698
Query: 484 KRFKKLLQKA 493
K FK +L A
Sbjct: 699 KHFKDMLAAA 708
>gi|17136666|ref|NP_476833.1| dead box protein 73D [Drosophila melanogaster]
gi|12644178|sp|P26802.3|DDX51_DROME RecName: Full=Probable ATP-dependent RNA helicase Dbp73D;
Short=DEAD box protein 73D
gi|4972732|gb|AAD34761.1| unknown [Drosophila melanogaster]
gi|7294064|gb|AAF49419.1| dead box protein 73D [Drosophila melanogaster]
gi|33589494|gb|AAQ22514.1| LD27814p [Drosophila melanogaster]
Length = 687
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 253/532 (47%), Gaps = 107/532 (20%)
Query: 5 KKKSMPVLP-WMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPV 54
KKK LP W+ P + E+ P +D L L+ AL+ M I LFPV
Sbjct: 104 KKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPV 163
Query: 55 QVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
Q V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 164 QKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLP 223
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
+LALQV I+E+C + + L
Sbjct: 224 VAELALQVYRV-----------------ISELCSKTE----------------------L 244
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
V L Q + DE +L+++ K G Y S DI+V TPGRL+DH++AT
Sbjct: 245 EVCLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPGRLVDHLHAT 291
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
+GF L+ L +LV+DE DR++ +Q WL + + + A T P + L+
Sbjct: 292 KGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQA- 348
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET----------- 338
F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 349 -------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEG 397
Query: 339 --------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 384
RY P L + E +LKPL + AL++ ++ + FT+S +
Sbjct: 398 ADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQA 457
Query: 385 HRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
RL +L F + K+ E SG VR++ L+ F GKI L+ SDA+ RG+DV V
Sbjct: 458 TRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADV 517
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
+ V++Y+ P +I TYIHR GRTARAG+ G T+L + ++ FKK+L A+
Sbjct: 518 DVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDANK 569
>gi|499204|gb|AAC14192.1| D-E-A-D box protein [Drosophila melanogaster]
Length = 644
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 252/531 (47%), Gaps = 106/531 (19%)
Query: 5 KKKSMPVLPWMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK M + W+ P + E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPV 224
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
+LALQV I+E+C + + L
Sbjct: 225 AELALQVYRV-----------------ISELCSKTE----------------------LE 245
Query: 171 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 230
V L Q + DE +L+++ K G Y S DI+V TPGRL+DH++AT+
Sbjct: 246 VCLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPGRLVDHLHATK 292
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
GF L+ L +LV+DE DR++ +Q WL + + + A T P + L+
Sbjct: 293 GFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQA-- 348
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------ 338
F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 349 ------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGA 398
Query: 339 -------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
RY P L + E +LKPL + AL++ ++ + FT+S +
Sbjct: 399 DTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQAT 458
Query: 386 RLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
RL +L F + K+ E SG VR++ L+ F GKI L+ SDA+ RG+DV V+
Sbjct: 459 RLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVD 518
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
V++Y+ P +I TYIHR GRTARAG+ G T+L + ++ FKK+L A+
Sbjct: 519 VVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDANK 569
>gi|198463449|ref|XP_001352828.2| GA21960 [Drosophila pseudoobscura pseudoobscura]
gi|198151259|gb|EAL30329.2| GA21960 [Drosophila pseudoobscura pseudoobscura]
Length = 697
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 254/532 (47%), Gaps = 114/532 (21%)
Query: 5 KKKSMPVLP-WMRSPVDV---SLFED---------CPLDHLPCLDPRLKVALQNMGISSL 51
+KK VLP W+ P + SL D +++L L + AL+ M I L
Sbjct: 106 RKKVTEVLPPWLAYPTIIEGGSLLPDDDLEAGKDEASIENLSYLKDHTRQALKQMKIKRL 165
Query: 52 FPVQVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRA 104
FPVQ V W Q P L RD+C+++PTGSGKTL++A+PIVQ L+NR VRC +RA
Sbjct: 166 FPVQRTVIPWILEAQGQPAP-LRPRDICVSAPTGSGKTLAFAIPIVQLLNNR-VRCKVRA 223
Query: 105 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 164
LVVLP +LALQV V A+
Sbjct: 224 LVVLPVAELALQVFK---------------------------------------VIRALC 244
Query: 165 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 224
L V L Q + DE +L++ K G Y S DI+V TPGRL+D
Sbjct: 245 SKTELEVCLLSKQHRLEDEQEKLVEVYK---GQIY----------SKADIVVTTPGRLVD 291
Query: 225 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 284
H++AT+GF L+ L +LV+DE DR++ +Q WL + R A T P
Sbjct: 292 HLHATKGFCLKSLKFLVIDEADRIMDAFFQNWLYHLDNHVRETANQLL--AGTQPPLCLK 349
Query: 285 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT--------- 335
L + P+ K++ SAT++QDP KL L L P TT
Sbjct: 350 ELYAT--------YGKVPH----KLLFSATMSQDPEKLQNLRLFQPKLFTTVFALPVPKS 397
Query: 336 -------GET---------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 379
ET +Y P L + E ++KPL L AL++ ++ + FT+
Sbjct: 398 DEQADGDEETTPNTGHFAGKYTTPVELTEQFCVTELRIKPLTLFALVEKYQWKRFLCFTN 457
Query: 380 SVESTHRLCTLLNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 438
S E+ +RL ++ F K+ E SG VR+KTL F G+I L+ SDA+ RG+
Sbjct: 458 STETANRLAFVMGKLFSTGPTKVAELSGKLSALVRTKTLSDFARGRINGLICSDALARGI 517
Query: 439 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
DV V+ V++Y+ P +IKTYIHR GRTARAG+ G TLL + E +FKK+L
Sbjct: 518 DVADVDVVLSYETPRHIKTYIHRVGRTARAGRKGTAVTLLTEQEQAQFKKML 569
>gi|328768512|gb|EGF78558.1| hypothetical protein BATDEDRAFT_35707 [Batrachochytrium
dendrobatidis JAM81]
Length = 761
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 235/500 (47%), Gaps = 120/500 (24%)
Query: 43 LQNMGISSLFPVQVAV---------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L MGI FPVQ A+ W +++ PG DLC+ + TGSGKTL+YA+PIV+T
Sbjct: 159 LTAMGIEHWFPVQEAILPQLLKTRWWTQSVSPG----DLCVAASTGSGKTLAYAVPIVET 214
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L R + +RALV++PTRDLALQV
Sbjct: 215 LLTRVIPRIRALVIVPTRDLALQV------------------------------------ 238
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK-----RPKLEAGICYDP---EDVL 205
+ F ++ L V GQ+S + E + L+ L++ + P ED +
Sbjct: 239 ---RRTFESLVIGTKLRVAAVTGQASFSAEKALLVSAEIPCSSSLDSLLLQHPLANEDAI 295
Query: 206 QEL--QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 263
E S +DIL+ATPGRLMDH+N T GF+L HL +LV+DE DRLL +++ WL +VL+
Sbjct: 296 TESGGSSRIDILIATPGRLMDHLNGTPGFSLSHLRFLVIDEADRLLNQSFHGWLGSVLK- 354
Query: 264 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 323
++ +++ D P L K++ SATLT++P+K+A
Sbjct: 355 ---------------------AVDPVQKEAAASNHLDIPSTALQKLLFSATLTRNPSKIA 393
Query: 324 QLDLHHPLFLTTG---------------------------ETRYKLPERLESYKLICESK 356
L L +P ++T E R+ P L ++
Sbjct: 394 SLRLRNPRYITVSGSPDGLLDQDVNNVDMNDQPANITSSVEQRFITPPSLVERMVVLSES 453
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHR-----LCTLLNHFGELRIK---IKEYSGLQ 408
KPL L+ +L +VF SVES HR +L H G+ + +S
Sbjct: 454 DKPLALLYFFDTLKHSGVLVFVKSVESAHRLSLLLNLSLKLHHGKASNDQPLTEAFSSDL 513
Query: 409 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV-EGVNNVVNYDKPAYIKTYIHRAGRTAR 467
S R K + F+ G+I L+ SD M RGMD+ E V V+NY P+ IK+Y+HR GRTAR
Sbjct: 514 SVSKRQKLISMFKAGQILGLICSDIMARGMDLGESVKVVINYSVPSRIKSYVHRIGRTAR 573
Query: 468 AGQLGRCFTLLHKDEVKRFK 487
AG+ G +T L +V+ FK
Sbjct: 574 AGRDGIAYTFLESRQVRWFK 593
>gi|328863604|gb|EGG12703.1| hypothetical protein MELLADRAFT_101203 [Melampsora larici-populina
98AG31]
Length = 892
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 260/554 (46%), Gaps = 135/554 (24%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-------------- 70
+DC D L L + L+ +GI L PVQ++V+ IG ++
Sbjct: 354 KDCKDDQL-ALSQFIINRLKEIGIEYLLPVQISVFSALIGKLRNKKITPSSILYPINHPP 412
Query: 71 -DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
D+CIN+PTGSGKTLSY +PIV+TLS+R V LRAL+VLPTRDL LQV
Sbjct: 413 SDICINAPTGSGKTLSYIVPIVETLSSRTVVRLRALIVLPTRDLVLQV------------ 460
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
K F +I+ GL + + GQ S + E + L
Sbjct: 461 ---------------------------KQTFESISKGTGLKLAIVTGQHSFSQEQALL-- 491
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
+G P + E + VD+++ATPGRL+DH+N T GF+L HLC+L++DE D+LL
Sbjct: 492 -----SGNA--PFNTSSECK--VDVVIATPGRLIDHLNQTPGFSLSHLCFLILDEADQLL 542
Query: 250 REAYQAWLPTVLQ-----LTRSDNENR----FSDASTFLPSAFGSLKTIRR--------- 291
+ Q+WL +L+ L+++ + ++ + D + + L + R
Sbjct: 543 SKD-QSWLYQILKYELKKLSKTHSNSKQIINYDDEDSEMMIQQEELNSARNEPLPLLKKF 601
Query: 292 -----CG-----------VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
C +E K +P+ R+ ++ SATL +DP KL L L +PLF+
Sbjct: 602 MDSVECNEISSDWRPLLKLEDPCKTRPF-RI--LLFSATLKRDPTKLTHLGLRNPLFIKV 658
Query: 336 GE---------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+ Y LP L+ + ++ +LKPL L L++ + ++F SVE R
Sbjct: 659 QNPSVEVIDNFSGYSLPPNLQQHLIVTTPQLKPLTLFHLIKVREVKNALIFCKSVEGATR 718
Query: 387 LCTLLN------------HFGELRIKIKEYSGLQRQSV----------RSKTLKAFREGK 424
L L E IK E S + + R + L F+ G
Sbjct: 719 LVNLYQLMRKGWMEKSTTEANENEIKDGENSNVLGTAALFSSDLKPIDRKRILNEFQNGS 778
Query: 425 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
I +LV SD + RG+D+ + NV+NYD P IK YIHR GRTARAG+ G+ ++L+ E +
Sbjct: 779 INLLVCSDVIARGLDLPTIENVINYDTPVNIKKYIHRIGRTARAGKFGQAWSLVEFQEAR 838
Query: 485 RFKKLLQKADNDSC 498
K+ ++ + C
Sbjct: 839 YLKESIKDSLGMEC 852
>gi|195590910|ref|XP_002085187.1| GD12444 [Drosophila simulans]
gi|194197196|gb|EDX10772.1| GD12444 [Drosophila simulans]
Length = 687
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 250/531 (47%), Gaps = 106/531 (19%)
Query: 5 KKKSMPVLPWMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK +M + W+ P + E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVNMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPV 224
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
+LALQV I+ +C + D L
Sbjct: 225 AELALQVYRV-----------------ISALCSKTD----------------------LE 245
Query: 171 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 230
L Q + DE +L+++ K G Y S DI+V TPGRL++H++AT+
Sbjct: 246 ACLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPGRLVEHLHATK 292
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
GF L+ L +L++DE DR++ +Q WL + + + A T P + L+
Sbjct: 293 GFCLKSLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQA-- 348
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------ 338
F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 349 ------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGS 398
Query: 339 -------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
RY P L + E +LKPL + AL++ ++ + FT+S +
Sbjct: 399 DTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQAS 458
Query: 386 RLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
RL +L F + K+ E SG VR + L+ F GKI L+ SDA+ RG+DV V+
Sbjct: 459 RLTFVLEVLFQKYNTKVSELSGNLSAKVRKERLRDFAAGKINGLICSDALARGIDVADVD 518
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
V++Y+ P +I TYIHR GRTARAG+ G TLL + ++ FKK+L A+
Sbjct: 519 VVLSYEIPRHITTYIHRVGRTARAGRKGTAVTLLTEYDMTLFKKILSDANK 569
>gi|195328224|ref|XP_002030816.1| GM24369 [Drosophila sechellia]
gi|194119759|gb|EDW41802.1| GM24369 [Drosophila sechellia]
Length = 687
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 249/531 (46%), Gaps = 106/531 (19%)
Query: 5 KKKSMPVLPWMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPVQ 55
KK +M + W+ P + E+ P +D L L+ AL+ M I LFPVQ
Sbjct: 105 KKVNMQLPNWLAHPTIIEGGSLQPEEEVPTSEAIDQLDYLEKYTCQALKQMKIKRLFPVQ 164
Query: 56 VAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPT 110
V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 165 KQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPV 224
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
+LALQV I+ +C + D L
Sbjct: 225 AELALQVYRV-----------------ISALCSKTD----------------------LE 245
Query: 171 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 230
L Q + DE +L+++ K G Y S DI+V TPGRL+DH++AT+
Sbjct: 246 ACLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPGRLVDHLHATK 292
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
GF L+ L +L++DE DR++ +Q WL + + + A T P + L+
Sbjct: 293 GFCLKSLKFLIIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQA-- 348
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------ 338
F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 349 ------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGS 398
Query: 339 -------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
RY P L + E +LKPL + AL++ ++ + FT+S +
Sbjct: 399 DTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQAS 458
Query: 386 RLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
RL +L F + + E SG VR + L+ F GKI L+ SDA+ RG+DV V+
Sbjct: 459 RLTFVLKVLFQKYSTNVSELSGNLSAKVRKERLRDFAAGKINGLICSDALARGIDVADVD 518
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
V++Y+ P +I TYIHR GRTARAG+ G TLL + ++ FKK+L A+
Sbjct: 519 VVLSYEIPRHITTYIHRVGRTARAGRKGTAVTLLTEYDMTLFKKILSDANK 569
>gi|193596603|ref|XP_001949748.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Acyrthosiphon pisum]
Length = 528
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 253/550 (46%), Gaps = 108/550 (19%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ--V 56
+ KK VLP W+ P VS+ + P+D +P LDP L L+N G + FPVQ +
Sbjct: 19 KKNKKVKRVLPDWLAKPTVVSVDLKHLEVPIDGIPELDPALVQKLKNKGCTHFFPVQNQL 78
Query: 57 AVW---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
W + + RDLCI++PTGSGKTLSY LPI+QTL + LRAL+VLPT+DL
Sbjct: 79 VPWIIKTQKHWDYRWLRDLCISAPTGSGKTLSYVLPIIQTLKTFSRHQLRALIVLPTKDL 138
Query: 114 ALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGL 173
A+QV Y I A L V L
Sbjct: 139 AVQVYKVFLYY--------------------------------------IKNAFDLRVLL 160
Query: 174 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 233
++ ++ E I + YD +L VDI+V TPGRL+DH+ T GF+
Sbjct: 161 LESKNMTLEKEKERI--------VQYDSSIGWIDL---VDIIVTTPGRLVDHLYYTEGFS 209
Query: 234 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 293
L++L +LV+DE D WL ++ +D+ + +L T+
Sbjct: 210 LKNLRFLVLDEADSFTNILQNEWL------------HKVNDSLAYNGPTKCTLNTLN--- 254
Query: 294 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFL-------------TTGET- 338
D P R +++ SATLTQDP KL L L P LF TTG
Sbjct: 255 ------DSP-QRTQRLLFSATLTQDPEKLKFLKLFEPKLFTSIIKRKNTQLPTDTTGTDE 307
Query: 339 --------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+Y P+ L+ Y ++C + KPL L L++S G ++ I F S HRL L
Sbjct: 308 PVRGDFVGKYTTPKELKEYMVLCPEENKPLTLYHLIRSKGLKRVICFVKSKIEVHRLTRL 367
Query: 391 LNHFGELR-----IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
L E +++ E S Q S +K F GKI VL+ +D++ RG+D+E ++
Sbjct: 368 LCKLSEFDTNNSPLRVNEISSDVTQKAHSGYIKQFSNGKIDVLICTDSLARGIDIELISC 427
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 505
V+ Y+ P Y K YIHR GRTARAG G+ T + + + F+ +L A S +
Sbjct: 428 VILYNVPKYPKNYIHRIGRTARAGHKGKAITFVTPEHKELFENVLNSAGKTSLKNMKVDI 487
Query: 506 SLIESLRPVY 515
S +E +Y
Sbjct: 488 SDLEQYEQMY 497
>gi|321459585|gb|EFX70637.1| hypothetical protein DAPPUDRAFT_112535 [Daphnia pulex]
Length = 721
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 174/510 (34%), Positives = 242/510 (47%), Gaps = 102/510 (20%)
Query: 11 VLP-WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--WQETIG 64
VLP W+ P +S P+ L LD L AL I FPVQ V W
Sbjct: 208 VLPTWLAKPSVISCDLSKNKMPIKELNGLDKFLHDALNRNKIGFFFPVQQQVIPWLLESQ 267
Query: 65 PGLFER-DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
LF D+C+++PTGSGKTL++ LP +Q L ++VR LR L VLP DLA+QV
Sbjct: 268 QQLFRPCDMCVSAPTGSGKTLAFVLPTIQALWRQSVRRLRCLAVLPVHDLAVQVYRVYLS 327
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+C L V L GQ+S DE
Sbjct: 328 FCA---------------------------------------GTNLQVALISGQASFYDE 348
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
L+++ K AG + + DI+V TPGRL+DH+ T GF+L+ L YL++D
Sbjct: 349 QQLLVRKGK--AG----------QYLTKPDIVVCTPGRLVDHLQRTPGFSLKSLRYLIID 396
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DR++ E + WL V + +EN + + +P+
Sbjct: 397 EADRIMEEEHNDWLFHVEKAIGLSSENLVAQKLS-----------------------RPW 433
Query: 304 PRLV-KMVLSATLTQDPNKLAQLDLHHPLFLTT------GET------------RYKLPE 344
+ V K++ SATL+QDP KL +L L P T+ E+ ++ P
Sbjct: 434 EKYVQKLLFSATLSQDPEKLTRLGLFQPKLFTSVVSTESAESADNTIQSHHFVGKFTTPA 493
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
L + C LKPL + LL+ + FT+S +THRLC LL FG+L K+ E
Sbjct: 494 ELTEHFFKCPPMLKPLAVYCLLKKFKYHSALCFTNSRSATHRLCELLKQFGDL--KVAEC 551
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
S ++ R K LK F GKI +LV +DA++RGMD+ V+ V++YD P Y+K YIHRAGR
Sbjct: 552 SSEISKAPRDKLLKDFSTGKIDLLVCTDAVSRGMDLGVVDCVISYDSPKYVKNYIHRAGR 611
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
ARAG+ G T+L E+ F KLL A+
Sbjct: 612 AARAGRPGTAITILMDSEMHGFNKLLAMAE 641
>gi|328702076|ref|XP_001949723.2| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Acyrthosiphon pisum]
Length = 528
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 252/550 (45%), Gaps = 108/550 (19%)
Query: 3 EAKKKSMPVLP-WMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ--V 56
+ KK VLP W+ P VS+ + P+D +P LDP L L+N G + FPVQ +
Sbjct: 19 KKNKKVKRVLPDWLAKPTVVSVDLKHLEVPIDGIPELDPALVQKLKNKGCTHFFPVQNQL 78
Query: 57 AVW---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL 113
W + + RDLCI++PTGSGKTLSY LPI+QTL + LRAL+VLPT+DL
Sbjct: 79 VPWIIKTQKHWDYRWLRDLCISAPTGSGKTLSYVLPIIQTLKTFSRHQLRALIVLPTKDL 138
Query: 114 ALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGL 173
A QV Y I A L V L
Sbjct: 139 AAQVYKVFLYY--------------------------------------IKNAFDLRVLL 160
Query: 174 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 233
++ ++ E I + YD +L VDI+V TPGRL+DH+ T GF+
Sbjct: 161 LESKNMTLEKEKERI--------VQYDSSIGWIDL---VDIIVTTPGRLVDHLYYTEGFS 209
Query: 234 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 293
L++L +LV+DE D WL ++ +D+ + +L T+
Sbjct: 210 LKNLRFLVLDEADSFTNILQNEWL------------HKVNDSLAYNGPTKCTLNTLN--- 254
Query: 294 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFL-------------TTGET- 338
D P R +++ SATLTQDP KL L L P LF TTG
Sbjct: 255 ------DSP-QRTQRLLFSATLTQDPEKLKFLKLFEPKLFTSIIKRKNTQLPTDTTGTDE 307
Query: 339 --------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+Y P+ L+ Y ++C + KPL L L++S G ++ I F S HRL L
Sbjct: 308 PVRGDFVGKYTTPKELKEYMVLCPEENKPLTLYHLIRSKGLKRVICFVKSKIEVHRLTRL 367
Query: 391 LNHFGELR-----IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
L E +++ E S Q S +K F GKI VL+ +D++ RG+D+E ++
Sbjct: 368 LCKLSEFDTNNSPLRVNEISSDVTQKAHSGYIKQFSNGKIDVLICTDSLARGIDIELISC 427
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 505
V+ Y+ P Y K YIHR GRTARAG G+ T + + + F+ +L A S +
Sbjct: 428 VILYNVPKYPKNYIHRIGRTARAGHKGKAITFVTPEHKELFENVLNSAGKTSLKNMKVDI 487
Query: 506 SLIESLRPVY 515
S +E +Y
Sbjct: 488 SDLEQYEQMY 497
>gi|326429455|gb|EGD75025.1| hypothetical protein PTSG_07250 [Salpingoeca sp. ATCC 50818]
Length = 751
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 242/478 (50%), Gaps = 82/478 (17%)
Query: 5 KKKSMPVLPWMRSPVDVSLF----EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
++ + ++ W+ PV V E P++ L L PRL L+ G S LFPVQ +
Sbjct: 211 QRNTGGLVHWLDHPVRVDALIKPDELLPMETL-GLHPRLLAQLKVAGFSRLFPVQAVIVP 269
Query: 61 ETI---GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ + D+C+++PTGSGKTL+Y +PI+Q L R V LRA+VVLPTR L QV
Sbjct: 270 DMLRSRHSAYPAGDICVSAPTGSGKTLAYVIPILQRLCTRVVPQLRAVVVLPTRQLVQQV 329
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ A + C +NI AD ++ + V + GQ
Sbjct: 330 H-AVFEACSRNIH---ADSTVP-----------------------------IRVAMCAGQ 356
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+++ E + + +P+L+ SAVDI++ TPGRL+DHI+ T GFTL+H+
Sbjct: 357 TALWKE--QQLLQPRLDGS-------------SAVDIVITTPGRLVDHIDRTDGFTLQHV 401
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LVVDE DRLL ++YQ+WL + + D + P + + R
Sbjct: 402 EFLVVDEADRLLMQSYQSWLSKLHNCLFAGGR---PDPTNLTPQMYA----LMRAACAHN 454
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP---LFLTTGET-----------RYKLP 343
F P + KM SATL++DP +A L L P L TG+ +P
Sbjct: 455 F---PGVHVQKMFFSATLSRDPQIIANLRLCFPRMYLATQTGQAVVCVFGGKKGVNTVIP 511
Query: 344 ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE 403
+L + ++C + KPL L+ LL SL ++ +VF SSVE+T RL TLL FG +R +++
Sbjct: 512 PQLHEHSIVCSASEKPLVLLYLLSSLQMDRTLVFASSVETTTRLYTLLKLFGAVR--VQQ 569
Query: 404 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
S Q S LK F G+I VLV SD M RG+D+ V NV+ YD P+ KTYIHR
Sbjct: 570 ISSKQDARKSSGILKKFERGEISVLVCSDTMARGIDLANVENVICYDCPSKPKTYIHR 627
>gi|345492759|ref|XP_001599929.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Nasonia
vitripennis]
Length = 631
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 247/538 (45%), Gaps = 116/538 (21%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHLP-CLDPRLKVALQNMGISSLFPVQVAV--W----Q 60
VLP W+ P V L + LD + LD +L L+ G LFPVQ V W
Sbjct: 145 VLPHWLTHPEIVHSDLSKGPTLDDMQNVLDSKLVDKLKADGFDKLFPVQARVLAWLVKCD 204
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
+ G + RD C++ PTGSGKTL+YALPI+Q L + VR +R L+VLP ++LA QV
Sbjct: 205 QDYKTGKWVRDTCVSMPTGSGKTLAYALPIIQLLQHNFVRLVRCLIVLPVQELATQVY-- 262
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
DV + + + L G SS
Sbjct: 263 -------------------------------------DVISKYSTGTSPRIALISGASSF 285
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+E +L+++ + + I S VDI++ATPGRL+DHI T GF+L L +L
Sbjct: 286 KEEQEKLVQKTEKDDYI------------SRVDIVIATPGRLIDHIRKTEGFSLSALRFL 333
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR WL ++P + V +
Sbjct: 334 VIDEADRATE-----WL-------------------QYIPFPHSKAPPLSVANVRSSWNT 369
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------------------ETRYK 341
K++LSATL+QDP KL++L L P+ T+ +RY
Sbjct: 370 PAQ----KLLLSATLSQDPEKLSRLGLFRPILFTSAVVDLEKTDKDINLDEDLNVASRYG 425
Query: 342 LPERLESYKLICESKLKPLYLV-ALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-I 399
P L + C + KPL L L++ EK +VFT+S E+ HRL LL + + +
Sbjct: 426 NPSELTERIVECSIQHKPLALYRQLMKDEVIEKTLVFTNSAEAAHRLAILLQSLLKSKDV 485
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
+ E S R +TL+ F +G ++VLVSSDA+ RG+D+ + VV+YD P ++K YI
Sbjct: 486 TVGELSAQLGSKQREETLEKFIQGTLRVLVSSDALARGLDIPEIKLVVSYDLPKHVKGYI 545
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
HRAGRT R G G +LL +++ F ++L K S+P+ ESL V +S
Sbjct: 546 HRAGRTGRGGHPGTAISLLLPNQIALFSRMLNKVGK------SVPTPEKESLDEVAES 597
>gi|397634960|gb|EJK71658.1| hypothetical protein THAOC_06880 [Thalassiosira oceanica]
Length = 790
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 260/543 (47%), Gaps = 101/543 (18%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSN-------RAVRCLRALVVLPTRDLALQVNSARC 122
RD+C +SPTGSGKTL++ LPI+ L + R +R LRALVVLP+RDLA QV+
Sbjct: 221 RDVCCHSPTGSGKTLAFVLPILTALHDGTSCGGARGLRRLRALVVLPSRDLARQVHGVFM 280
Query: 123 KYC----CKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV----------- 167
+Y K + ++ + SL+ S + + V
Sbjct: 281 RYSKGSRIKIGLAVGGGRKRTDLTNERRSLVVESQHESTGHYKEDDGTVIRRRSGGPLEE 340
Query: 168 -GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 226
V + +SI++ +S R ++ C++ + + SAVDILV TPGRL+DH+
Sbjct: 341 ANARVRHSFDPTSISEALSAFDGRGSKDS--CFEATPKICGI-SAVDILVCTPGRLVDHL 397
Query: 227 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN-------ENRFS------ 273
++T GFTL+HL ++V+DE DRL+ + YQ W+ VLQ + S+N + F
Sbjct: 398 DSTPGFTLQHLRFIVIDEADRLVNQPYQNWIRRVLQASNSENCFEPLNLDMSFREYIRQP 457
Query: 274 -----DASTF--------------LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
D TF S G T G+ G +P P L K++ SAT
Sbjct: 458 LRTAPDGQTFNIDPVTHRIAGSGAAHSLLGDSNTTE-SGLIGGTIGRPVP-LRKLLFSAT 515
Query: 315 LTQDPNKLAQLDLHHPL-----FLTTGET----------RYKLPERLESYKLICESKLKP 359
LTQDP KLA+L L +P +L ++ +Y LP L + C ++ KP
Sbjct: 516 LTQDPQKLARLGLDNPKHYDANYLKKHQSGSATEEAKAGKYFLPVGLRESMVECTAEQKP 575
Query: 360 L------------YLVALLQSLGEEKCIVFTSSVESTHRLCTLL------NHFGELRIKI 401
L + + + IVFTSSV+STHRL LL +G L +
Sbjct: 576 LVLLALLLDERRQHKMVESSEQAADLTIVFTSSVDSTHRLARLLQLLWAAGGYG-LPSHV 634
Query: 402 KEYSGLQRQSVRSKTLKAFREG-----KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
EYS R+ L+ R K+ VLV SD M RGMD+ V V+NYD P++ K
Sbjct: 635 AEYSSSIDTKQRAAILRRCRSSLGENEKVSVLVCSDGMARGMDLPSVGVVINYDVPSFAK 694
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH--SIPSSLIESLRPV 514
TYIHR GRTAR G+ GR +L +V +F+K+ D + +H S+ L++ P+
Sbjct: 695 TYIHRCGRTARCGRTGRAINVLKGGQVNKFRKMRSLIDGGADAVHEGSVKKDLVKGALPL 754
Query: 515 YKS 517
YK+
Sbjct: 755 YKA 757
>gi|307209142|gb|EFN86284.1| Probable ATP-dependent RNA helicase Dbp73D [Harpegnathos saltator]
Length = 660
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 232/513 (45%), Gaps = 109/513 (21%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV--WQETIG 64
VLP W+ P + L +D L LDP+L AL+ GI LFPVQ +V W +
Sbjct: 165 VLPDWLVHPEVISADLSSGPNIDELHSILDPKLVEALKANGIVKLFPVQSSVIKWLHSCN 224
Query: 65 P----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
G + RD C+++PTGSGKTL+Y LPIVQ L R V +R LVVLP ++LA Q++
Sbjct: 225 KDRRVGWWLRDTCVSAPTGSGKTLAYVLPIVQQLQTRLVPKIRCLVVLPVQELAAQIHKV 284
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
Y L VGL G SS
Sbjct: 285 MVTYTSH---------------------------------------TNLKVGLLSGISSF 305
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
E S +IK+ S VDI++ATPGRL+ HI T GF+L+ L +L
Sbjct: 306 EQEQSSIIKKT------------ARGNYLSTVDIVIATPGRLISHILKTPGFSLDFLRFL 353
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR WL +LP F S G +
Sbjct: 354 VIDEADRTTE-----WL-------------------QYLPE-FHSRAHSLTIGNVHSSEI 388
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------------GE--TRYKL 342
P K++ SATL+QDP KL++L L P+ TT GE RY
Sbjct: 389 APAQ---KLLFSATLSQDPEKLSRLGLFQPILFTTVMVTGKDTDVNLDKMTGEFAGRYTS 445
Query: 343 PERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNHF-GELRIK 400
P L + C ++ KPL L LL K +VFT+S ++ HRL L+ E +
Sbjct: 446 PGELTELAVECAAEYKPLALYHLLTRHDTISKTLVFTNSGDTAHRLALLIRSLLSERNVT 505
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
+ E S R L F G+ VL+SSDA+ RG+D+ V VV+YD P +IK YIH
Sbjct: 506 VGELSAQLMPKQRESVLSKFASGETHVLISSDALARGLDIPEVQLVVSYDVPKHIKGYIH 565
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
RAGRT RAG+ G ++L ++ FK++L A
Sbjct: 566 RAGRTGRAGKPGTAVSVLTASQIGIFKQMLNGA 598
>gi|198425548|ref|XP_002130172.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
[Ciona intestinalis]
Length = 636
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 249/520 (47%), Gaps = 107/520 (20%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVW-------QETIGPGLFE-RDLCINSPTGSG 81
D P +D L L+++GI+ LFPVQ V Q +I LF RDLC+++PTGSG
Sbjct: 176 DIQPNIDQVLIQNLKDIGITQLFPVQQKVIPYILRDAQRSISHQLFPPRDLCVSAPTGSG 235
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
KT+++ALPIVQ L R VV TR AL V+ R E+
Sbjct: 236 KTIAFALPIVQALLQR--------VVPATR--ALVVSPTR------------------EL 267
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLS-VGLAVGQSSIADEISELIKRPKLEAGICYD 200
Q + VF ++ L + + + S+ E L+ K
Sbjct: 268 SAQ-----------IYKVFVSLCRNTQLKCILITAAKGSLLQEQRALLNFGK-------- 308
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
L DI+VATPGRL DH++ T F+L+ L +LV+DE DR++ + +Q WL V
Sbjct: 309 -----TGLACPADIVVATPGRLADHLSQTSAFSLDKLRFLVIDEADRMMEQIHQRWLTLV 363
Query: 261 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 320
Q + D+ LP +LK++ + + L K++ SATL+ DP
Sbjct: 364 EQKV-------YKDSFKPLPQHL-ALKSVTKNRIP----------LQKLLFSATLSADPE 405
Query: 321 KLAQLDLHHP-LFLTTGE-----------------TRYKLPERLESYKLICESKLKPLYL 362
KL QL+L P LF + +Y P+ LE Y + C + KPL
Sbjct: 406 KLQQLNLFQPRLFAAVVKPVQDNNMKCDVEENDFIGKYATPDGLEQYMIHCTAGEKPLIT 465
Query: 363 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHF----GELRIKIKEYSGLQRQSVRSKTLK 418
+ L+ L + + + F S+E+T +L L+ + G+ E++ S R K LK
Sbjct: 466 LNLV--LNKTRVLCFAGSIETTRKLSMLIQMYADKEGKKEFICTEFASHLPSSKRGKVLK 523
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F GKI VLV SD+M RG+DV V +V+ YD P IKTYIHR GRTARAG G +TLL
Sbjct: 524 DFISGKINVLVCSDSMARGLDVPCVEHVILYDVPPLIKTYIHRIGRTARAGATGTAYTLL 583
Query: 479 HKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLRPVYK 516
K E+ FKK++ AD C + + IP + + +Y+
Sbjct: 584 RKQEIFHFKKMI--ADAGKCKVKTMKIPKESTQKMVSIYE 621
>gi|242019954|ref|XP_002430423.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212515553|gb|EEB17685.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 518
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 238/543 (43%), Gaps = 93/543 (17%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSL---FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVA 57
M + KK + W+ +P VS+ + +D + LD L+ GI+ FPVQ
Sbjct: 1 MNDKKKVKRKLPDWLSNPSVVSVDLKNLNYTIDSISGLDKIFIDKLRANGITHFFPVQHQ 60
Query: 58 VW-----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
V E L+ D+C+++PTGSGKTL++ LPI+Q L R + +RALVVLP +D
Sbjct: 61 VIPCVLENERKPYLLWPNDICVSAPTGSGKTLAFVLPILQVLYKRIIPKIRALVVLPVQD 120
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV VF A L V
Sbjct: 121 LA---------------------------------------NQVFKVFETYAEPTDLKVL 141
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L + S E + L K D L S DI+V TPGRL++H+ T
Sbjct: 142 LLTPKRSFTAEQNLLYKF------------DDLGNYHSLTDIIVTTPGRLVEHLTKTNEL 189
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L YLV+DE DR++ WL L + N S+ + S I
Sbjct: 190 NFSELKYLVIDEADRVMENVQNDWL---YHLNKYIN----SECCKSYQAPIVSYNNI--- 239
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGET------------- 338
K P K++ SATL+QDP KL L L HP LF + E+
Sbjct: 240 -----LNQKRPPN--KLLFSATLSQDPEKLQALGLFHPRLFTSVVESGKSTEKNNNDESK 292
Query: 339 ---RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+Y P L+ Y +C KPL L LL S + + F +S +T +L +L
Sbjct: 293 FIGKYTTPAELKEYYTVCSKVNKPLLLHHLLISKSWKNILCFVNSSAATFKLAFILKKLC 352
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ + +++ S QS R++ L+ F GK+ +L+SSDA+ RG+D+ V VV+YD P ++
Sbjct: 353 KKKYTVQQLSANIVQSKRNRILQNFENGKVDILISSDALARGIDIPNVKYVVSYDCPKFV 412
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
KTY+HR GRT RAG+ G L EV F K++ A +S + + +E Y
Sbjct: 413 KTYVHRIGRTGRAGKEGHSLAFLTSKEVTSFNKMVSAAGKNSVDVFNFEVEELEQYEVTY 472
Query: 516 KSG 518
K
Sbjct: 473 KKA 475
>gi|380018891|ref|XP_003693352.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
Dbp73D-like [Apis florea]
Length = 577
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 245/526 (46%), Gaps = 115/526 (21%)
Query: 2 EEAKKKSMPV---LP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPV 54
E+++ KS V LP W+ +P + V L L+ L LD +L L+ GI+ LFPV
Sbjct: 78 EKSRHKSHEVKRILPEWLTNPRIISVDLDSGPSLEELNSILDLKLIEVLRTNGINKLFPV 137
Query: 55 QVAV--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
Q ++ W E + RD C+++PTGSGKTL+Y LPI+Q L +R V +R LVV+
Sbjct: 138 QASMISWLLKCNEDRQQKWWLRDTCVSAPTGSGKTLAYVLPIIQILQSRLVPKVRCLVVV 197
Query: 109 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 168
P ++LA QV VF
Sbjct: 198 PVQELA---------------------------------------TQVYKVFVTYTSHTX 218
Query: 169 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 228
L VGL G S +E ++K E E S VDI++ATPGRL+DHI
Sbjct: 219 LKVGLLSGASIFHEEQKNILK------------ESARGEYISIVDIIIATPGRLIDHILK 266
Query: 229 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 288
T GF+L +L +LV+DE D+ + +LP D R + F
Sbjct: 267 TPGFSLNNLQFLVIDEADK--AADWLEYLP--------DPHYRRPRLTLF---------N 307
Query: 289 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT------------- 335
+R C V K++ SATL+QDP KL +L L P+ T+
Sbjct: 308 LRSCEVPAQ----------KLLFSATLSQDPEKLNRLGLFQPILFTSVLVKDKDDDVNLD 357
Query: 336 ---GE--TRYKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLC 388
G+ RY P+ L+ + C ++ KP LY + + + K ++FT+S E+THRL
Sbjct: 358 KXIGDFIGRYTSPKELKEQAIECATEYKPAALYHIIINNDITP-KTLIFTNSGETTHRLT 416
Query: 389 TLLNHF-GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
LL E I + E S R K L F GKIQ+L+ SDA+ RG+D+ + V+
Sbjct: 417 ILLQSLLSEKNIVVGELSAQLVSKEREKILNKFINGKIQILICSDALARGVDIPDIQLVI 476
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
+YD P +I YIHRAGRT RAG+ G ++L +V FK +L A
Sbjct: 477 SYDLPKHINGYIHRAGRTGRAGKSGTAISILTPKQVGIFKNMLNNA 522
>gi|350416892|ref|XP_003491155.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like [Bombus
impatiens]
Length = 615
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 237/524 (45%), Gaps = 120/524 (22%)
Query: 5 KKKSMPVLP-WMRSPVDVSL-FEDCPL--DHLPCLDPRLKVALQNMGISSLFPVQVAV-- 58
K++ +LP W+ +P +S+ P D LD +L AL+ GI+ LFPVQ ++
Sbjct: 122 KREVKRILPEWLANPEVISIDLNSGPTLEDMNSILDSKLIEALRANGINKLFPVQASMVS 181
Query: 59 W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
W + + RD C+++PTGSGKTL+Y LPIVQ L R V +R LVV P ++LA
Sbjct: 182 WLLKCDKDRQQNWWLRDTCVSAPTGSGKTLAYVLPIVQILQFRLVPKVRCLVVAPVQELA 241
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
+Q+ Y L VGL
Sbjct: 242 MQIYKVMVTYTSH---------------------------------------TNLRVGLL 262
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
G S+ +E + K E+ E S VDI+VATPGRL+DHI T GF+L
Sbjct: 263 SGASAFHEEQRNIRK------------ENDRGEYISLVDIVVATPGRLIDHILKTSGFSL 310
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-----SLKTI 289
+ + +LV+DE D WL +LP +L +
Sbjct: 311 DDIRFLVIDEAD-----TAADWLE-------------------YLPEPHYQTPRLTLSNL 346
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT----TGET------- 338
R + K++ SATL+QDP KL +L L HP+ T TG+
Sbjct: 347 RSSKIPAQ----------KLLFSATLSQDPEKLNRLGLFHPILFTSVLVTGKDDDVNLDK 396
Query: 339 -------RYKLPERLESYKLICESKLKPLYLVALLQSLG-EEKCIVFTSSVESTHRLCTL 390
RY PE L+ + CE++ KP+ L LL G K +VFT+S + HRL L
Sbjct: 397 EAVNFIGRYTSPEELKEEAIECEAEYKPVALYQLLIRDGITSKALVFTNSGGTAHRLTIL 456
Query: 391 LNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
L + I + E S R L F G IQ+LV SDA+ RG+D+ V V++Y
Sbjct: 457 LQSLLSKKNIVVGELSAQLVSKEREDILTKFTSGNIQILVCSDALARGVDIPNVQLVISY 516
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
D P +I YIHRAGRT RAG+ G ++L +VK FK +L A
Sbjct: 517 DLPKHINGYIHRAGRTGRAGKSGTAISILTPKQVKIFKHMLNNA 560
>gi|332018269|gb|EGI58874.1| Putative ATP-dependent RNA helicase Dbp73D [Acromyrmex echinatior]
Length = 761
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 234/512 (45%), Gaps = 109/512 (21%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV--WQETIG 64
VLP W+ P + L PL+ L LD +L L+ GI LFPVQ + W
Sbjct: 274 VLPDWLAHPEIISADLNSGPPLEELESVLDAKLIEVLRANGIIKLFPVQSNIIKWLHKCN 333
Query: 65 P----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
G + +D C+++PTGSGKTL+Y LPIVQ L R V +R LVVLP ++LA Q++
Sbjct: 334 MHRKIGWWPKDTCVSAPTGSGKTLAYVLPIVQELQTRFVPKIRCLVVLPVQELAAQIHKV 393
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
Y L VGL G SS
Sbjct: 394 MVTYTSH---------------------------------------TDLKVGLLSGASSF 414
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
E + +IK K E G + S VDI++ATPGRL+DHI T GF+L++L +L
Sbjct: 415 KQEQNSIIK--KTERG----------QYLSRVDIIIATPGRLLDHILKTPGFSLDYLRFL 462
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR WL + + + P G++++ + +
Sbjct: 463 VIDEADRATE-----WLQYLPEF------------HSRPPLTLGNMRSSKVIPAQ----- 500
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-----------------RYKLP 343
K++ SATL+QDP KL++L L P TT T RY P
Sbjct: 501 -------KLLFSATLSQDPEKLSRLGLFQPKLFTTVVTDKDIDINLDKVAGDFIGRYTSP 553
Query: 344 ERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNHF-GELRIKI 401
L + C KP+ L LL K +VFT+S + HRL L+ E + +
Sbjct: 554 GELTELAVECPPSYKPIVLYQLLTKHDIIPKTLVFTNSGQHAHRLALLMQLLLSEWNVTV 613
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E S R L F GKI VL+SSDA+ RG+D+ V VV+YD P +IK YIHR
Sbjct: 614 GELSAQLASKQREDILSKFANGKIHVLISSDALARGLDILDVQLVVSYDLPKHIKGYIHR 673
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
AGRT RAG+ G ++L ++V FK++L A
Sbjct: 674 AGRTGRAGKSGTAVSILTPNQVGIFKQMLSGA 705
>gi|47214668|emb|CAG00904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 229/512 (44%), Gaps = 125/512 (24%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET---------IGPGLFE-RDLCINSP 77
P+ ++ L L L + GI FPVQ V IG G + RD+C+++P
Sbjct: 26 PVCNVAGLSSNLINKLHHNGIDHFFPVQAEVIPAILEAAQQGLLIGRGGYRPRDICVSAP 85
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
TGSGKTL++ +P+VQ L R V +RAL VLPT++LA
Sbjct: 86 TGSGKTLAFVIPVVQVLMQRVVCHVRALAVLPTKELA----------------------- 122
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
QV VF+A A L V + GQ S++ E + L + AG+
Sbjct: 123 ----------------QQVYKVFSAYAEGTSLRVLVLAGQRSLSAEQASL---SEYRAGV 163
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 257
+S DI+VATPGRL+DHIN G L+ L +L++DE DR++ +QAWL
Sbjct: 164 ----------RRSQADIIVATPGRLVDHINKKSGLKLDQLRFLIIDEADRMIDSMHQAWL 213
Query: 258 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 317
V++ T R +AS+ + + C P L K++ SATLTQ
Sbjct: 214 SQVVKATYGTGGGR--EASSIFSRSEAA------CATAASLSPPQMP-LQKLLFSATLTQ 264
Query: 318 DPNKLAQLDLHHP-LFLTTGET------------RYKLPERLESYKLICESKLKPLYLVA 364
+P KL QLDLH P LF +T R+ P+ L + + C KPL ++
Sbjct: 265 NPEKLQQLDLHQPRLFSSTHRQADATVPAAQKAERFDFPQGLSEFYVPCTLSRKPLLILH 324
Query: 365 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 424
+ + + FT+S ++ HR
Sbjct: 325 FILRMKLSPILCFTNSRQAAHR-------------------------------------- 346
Query: 425 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
L+S+DA RG+D+ GV VVNYD P Y++TY+HR GRTARAG+ G FT L + K
Sbjct: 347 ---LISTDAAARGIDISGVKCVVNYDAPQYVRTYVHRVGRTARAGKSGLAFTFLLGVQEK 403
Query: 485 RFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
F K++ A + + S ++ + Y+
Sbjct: 404 NFLKMVMDAGSPGIQKQIVKSESLKGMEGRYE 435
>gi|383850916|ref|XP_003701020.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like
[Megachile rotundata]
Length = 679
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 240/519 (46%), Gaps = 110/519 (21%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVS--LFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVA 57
++ K++ VLP W+ +P +S L L+ L LD +L L+ GI+ LFPVQ +
Sbjct: 183 DKKKQEVKRVLPDWLANPNIISNDLNNGPSLESLNSVLDTKLIQILKTNGINKLFPVQAS 242
Query: 58 V--W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ W E G + RD C+++PTGSGKTL+Y LPIV L +R V +R LVV+P +
Sbjct: 243 MISWLLKCNEDKQQGWWLRDTCVSAPTGSGKTLAYVLPIVHILQSRLVPKIRCLVVVPVQ 302
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV V A L+V
Sbjct: 303 ELA---------------------------------------AQVYKVMVAYTSHTNLTV 323
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
L G SS E S +++ + E SAVDI+VATPGRL+DHI T
Sbjct: 324 ALLSGASSFQQEQSTILRT------------NARGESVSAVDIVVATPGRLIDHILKTPE 371
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +LV+DE DR+ +D +LP +
Sbjct: 372 FSLSDLRFLVIDEADRV------------------------TDWIDYLPEPHNHTPRLTL 407
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------- 335
+ R K P + K++ SATL+QDP KL+ L L P+ TT
Sbjct: 408 SNM-RSSK----PPVQKLLFSATLSQDPKKLSHLRLFQPVLFTTVLVTDNDNDVNLDTEA 462
Query: 336 GE--TRYKLPERLESYKLICESKLKPLYLVALLQSLGEE-KCIVFTSSVESTHRLCTLLN 392
G RY PE L + C + KPL L LL K ++FT+S ES HRL LL
Sbjct: 463 GNYIGRYTGPEGLTERAVECTMEYKPLALYDLLTRNNTIIKTLIFTNSGESAHRLTILLG 522
Query: 393 HFGELR-IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
++ + + S + R L F G+IQ+L+SSDA+ RGMD+ V V++YD
Sbjct: 523 SLLAVKNVTVGTLSAQLKPKERENVLGKFITGEIQILISSDALARGMDIPDVGLVISYDL 582
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
P +IK YIHRAGRT RAG+ G ++L +V FK +L
Sbjct: 583 PKHIKGYIHRAGRTGRAGKTGIVISILTPKQVGLFKSML 621
>gi|328790575|ref|XP_001122539.2| PREDICTED: ATP-dependent RNA helicase DDX51-like [Apis mellifera]
Length = 600
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 236/518 (45%), Gaps = 121/518 (23%)
Query: 11 VLP-WMRSP--VDVSLFEDCPLDHL-PCLDPRLKVALQNMGISSLFPVQVAV--W----Q 60
+LP W+ +P + V L L+ L LD +L L+ GI+ LFPVQ ++ W
Sbjct: 114 ILPEWLTNPRIISVDLDSGPSLEELHSILDLKLIEVLRTNGINKLFPVQASMISWLLKCN 173
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
E + RD C+++PTGSGKTL+Y LPI+Q L +R V +R LVV+P ++LA
Sbjct: 174 EDRQQKWWLRDTCVSAPTGSGKTLAYVLPIIQILQSRLVPKVRCLVVVPVQELA------ 227
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
QV VF L VGL G S
Sbjct: 228 ---------------------------------TQVYKVFVTYTSHTNLKVGLLSGASIF 254
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+E ++K E E S VDI++ATPGRL+DHI T GF+L L +L
Sbjct: 255 HEEQKNILK------------ESARGEYISIVDIIIATPGRLIDHILKTPGFSLNDLQFL 302
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-----SLKTIRRCGVE 295
V+DE D+ WL +LP +L + C +
Sbjct: 303 VIDEADKA-----ADWLE-------------------YLPDPHYRRPRLTLLNLHSCEIP 338
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET----------------- 338
K++ SATL+QDP KL +L L P+ T+ T
Sbjct: 339 AQ----------KLLFSATLSQDPEKLNRLGLFQPILFTSVLTDKDDDVNLDKEVGDFIG 388
Query: 339 RYKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-G 395
RY P+ L+ + C ++ KP LY + + + K ++FT+S ++THRL LL F
Sbjct: 389 RYTSPKELKEQAIECATEYKPAALYHIIINNDIIP-KTLIFTNSGKTTHRLTILLQSFLS 447
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
E I + E S R K L F GKIQ+L+ SDA+ RG+D+ V VV+YD P +I
Sbjct: 448 EKNIIVGELSAQLVSKEREKILNKFINGKIQILICSDALARGVDIPDVQLVVSYDLPKHI 507
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
YIHRAGRT RAG+ G ++L +V FK +L A
Sbjct: 508 NGYIHRAGRTGRAGKSGTAISILTSKQVGIFKHMLNNA 545
>gi|157820497|ref|NP_001100620.1| ATP-dependent RNA helicase DDX51 [Rattus norvegicus]
gi|149063713|gb|EDM14036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 601
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 250/544 (45%), Gaps = 132/544 (24%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 141 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGISSYFPVQAAVIPAL 200
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 201 LESADNGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 260
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D + L V
Sbjct: 261 LAQQVS---------KVFNIYTDTT------------------------------PLRVA 281
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L++ K G C DI+VATPGRL+DHI+ T GF
Sbjct: 282 LVTGQKSLAKEQESLVQ--KTADGFC-----------CLADIVVATPGRLVDHIDQTPGF 328
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ A+ + GS ++R
Sbjct: 329 SLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AAFYTEDPTGSCALLQRT 376
Query: 293 ---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------------- 335
V P L K++ SATLTQ+P KL +L L+ P +T
Sbjct: 377 QPQAVTAASTCIPQMPLQKLLFSATLTQNPEKLQRLGLYQPRLFSTRLGHQSPRDTVEVD 436
Query: 336 -GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y P L + + C KPL + L+ + + + FT+S E++HRL L F
Sbjct: 437 ENLGKYTFPVGLTHHYVPCRLSSKPLIVFHLVLGMNFSRALCFTNSRENSHRLFLLAQAF 496
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + E+S R K LK F +GKIQ++
Sbjct: 497 GG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLV-------------------------- 528
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
GRTARAG+ G+ FTLL K + ++F +++ +A H +P L++ L
Sbjct: 529 --------GRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELACHEVPRKLLQPLVAR 580
Query: 515 YKSG 518
Y++
Sbjct: 581 YETA 584
>gi|158286571|ref|XP_308815.4| AGAP006941-PA [Anopheles gambiae str. PEST]
gi|157020531|gb|EAA04138.4| AGAP006941-PA [Anopheles gambiae str. PEST]
Length = 655
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 166/538 (30%), Positives = 249/538 (46%), Gaps = 102/538 (18%)
Query: 13 PWMRSP--VDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W----QETI 63
PW+ P + L P + LD R+K L++MG LFPVQ V W +
Sbjct: 148 PWLSHPTIIQHDLSAKGPSIKQQSYLDDRIKANLKSMGFKRLFPVQEKVIPWILEAHQKP 207
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + RD+CI+SPTGSGKTL++A+P+VQ L R +RALV+LP
Sbjct: 208 AP-FWPRDVCISSPTGSGKTLAFAVPVVQLLLKRVAPAIRALVILP-------------- 252
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ E+ Q +F Q+ D I P V LS G+ + E
Sbjct: 253 --------------VQELAEQ----VFQVFRQLCD-GTNIHPVV-LSRGM-----QLEVE 287
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
+L+K E Y P+ VDI+V T GRL++H+++T+GFTL HL +L+VD
Sbjct: 288 QQKLVKYCNGE----YMPK---------VDIVVTTAGRLIEHLHSTKGFTLRHLRFLIVD 334
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E D+++ + WL + + + +++ + L S R +P+
Sbjct: 335 EADKVMNQIQNDWLYHLNKHVKHESDEYLLGRTADLLSQSELFDRAR----------QPH 384
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLT--------------TGETR---------- 339
K++ SAT +D KL L L HP T T T+
Sbjct: 385 ----KLLFSATFKRDAEKLKTLKLFHPKLFTAVIDPQERTMMAQSTATTQAAEPRRGNFA 440
Query: 340 --YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
Y P L+ + E + KPL L L++ G K +VFT+ + ++HRL +L
Sbjct: 441 GQYTTPAELKECICLTEQRSKPLTLYGLIRENGYRKFLVFTNGINTSHRLSFVLQRLFGT 500
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ I+E+S + R L F GK+ ++ +DA+ RG+D+E + V++YD P +I
Sbjct: 501 DMVIEEWSSSLSPATRKSVLNRFSLGKVNGIICTDALARGIDIENIEVVISYDMPNHIDK 560
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
YIHR GRTARAG G TLL +DE K+F LL++A+ + SL E Y
Sbjct: 561 YIHRIGRTARAGLRGTAITLLAEDEKKKFNALLKEANKRELETMEVSPSLEEEFAAKY 618
>gi|340711741|ref|XP_003394428.1| PREDICTED: probable ATP-dependent RNA helicase Dbp73D-like [Bombus
terrestris]
Length = 659
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 237/524 (45%), Gaps = 120/524 (22%)
Query: 5 KKKSMPVLP-WMRSPVDVSL-FEDCPL--DHLPCLDPRLKVALQNMGISSLFPVQVAV-- 58
K++ +LP W+ +P +S+ P D LD +L AL+ GI+ LFPVQ ++
Sbjct: 166 KREVKRILPEWLANPEVISIDLNSGPTLEDMNSILDSKLIEALRANGINKLFPVQASMVS 225
Query: 59 W----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
W + + RD C+++PTGSGKTL+Y LPIVQ L R V +R LVV P ++LA
Sbjct: 226 WLLKCNKERQQKWWLRDTCVSAPTGSGKTLAYVLPIVQILQFRLVPKVRCLVVAPVQELA 285
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
+Q+ Y L VGL
Sbjct: 286 MQIYKVMVTYTSH---------------------------------------TNLRVGLL 306
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
G S+ +E + K E+ E S VDI+VATPGRL+DHI T GF+L
Sbjct: 307 SGASAFHEEQRNIRK------------ENDRGEYISLVDIVVATPGRLIDHILKTSGFSL 354
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-----SLKTI 289
+ + +LV+DE D WL +LP +L +
Sbjct: 355 DDIRFLVIDEAD-----TAADWLE-------------------YLPEPHYQTPRLTLSNL 390
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------------- 335
R + K++ SATL+QDP KL +L L HP+ T+
Sbjct: 391 RSSKIPAQ----------KLLFSATLSQDPEKLNRLGLFHPILFTSVLVTDKDDDVNLDK 440
Query: 336 --GE--TRYKLPERLESYKLICESKLKPLYLVALLQSLG-EEKCIVFTSSVESTHRLCTL 390
G RY PE L+ + CE++ KP+ L L+ G K +VFT+S + HRL L
Sbjct: 441 EVGNFIGRYTSPEELKEEAIECEAEYKPVALYQLIIRNGITSKVLVFTNSGGTAHRLTIL 500
Query: 391 LNH-FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
L + I + E S R L F GKIQ+LV SDA+ RG+D+ V V++Y
Sbjct: 501 LQSLLSKENIVVGELSAQLVSKEREDILTKFSSGKIQILVCSDALARGVDIPNVQLVISY 560
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
D P +I YIHRAGRT RAG+ G ++L +VK FK +L A
Sbjct: 561 DLPKHINGYIHRAGRTGRAGKSGTAISILTPKQVKIFKHMLNNA 604
>gi|293334099|ref|NP_001169826.1| uncharacterized protein LOC100383718 [Zea mays]
gi|224031859|gb|ACN35005.1| unknown [Zea mays]
Length = 174
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 132/177 (74%), Gaps = 7/177 (3%)
Query: 167 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 226
VGLSVG AVGQSSIADE+S L+ +PK E D E V E Q+ +DILVATP RLMDHI
Sbjct: 2 VGLSVGSAVGQSSIADEVSSLVPKPKQEFYPTIDEEYVQMEPQTKIDILVATPERLMDHI 61
Query: 227 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS---DASTFLPSAF 283
N T GF+LEHL YLV+DETDR++REAYQ+WLPTV+QLT S ++ D+ T L
Sbjct: 62 NMTNGFSLEHLQYLVIDETDRMVREAYQSWLPTVIQLTHSISQGHSWHDIDSQTLL---- 117
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 340
L +IRR GVER FK K YPRL KMVLSATLTQDP+KL+QL+LHHPL L +G+ RY
Sbjct: 118 HPLTSIRRSGVERVFKGKCYPRLGKMVLSATLTQDPSKLSQLELHHPLLLNSGKKRY 174
>gi|170032268|ref|XP_001844004.1| ATP-dependent RNA helicase DDX51 [Culex quinquefasciatus]
gi|167872120|gb|EDS35503.1| ATP-dependent RNA helicase DDX51 [Culex quinquefasciatus]
Length = 695
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 253/528 (47%), Gaps = 110/528 (20%)
Query: 13 PWMRSP--VDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE 69
PW+ P +D L + + L LD ++K L+ +G LFPVQ ET+ P + +
Sbjct: 123 PWLSHPTVIDSDLSKKGKSIKKLGYLDDQVKANLKKLGFKRLFPVQ-----ETVIPWILD 177
Query: 70 ----------RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 119
RD+CI+SPTGSGKTL++A+P+VQ L NR +RALV+LP ++LA QV
Sbjct: 178 AHQKPTPFWPRDVCISSPTGSGKTLAFAVPVVQLLLNRIAPAIRALVILPVKELAEQV-- 235
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
FG VF + + L + +
Sbjct: 236 ----------FG---------------------------VFEKLCEGTKIRPLLLSRKQT 258
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
+ E S+L+ R E Y P+ VDI+V T GRL++H+++T GFTL+HL +
Sbjct: 259 FSVEQSKLVARFNGE----YIPK---------VDIVVTTAGRLVEHLHSTTGFTLKHLRF 305
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
L++DE DR++ + WL + + + +++ L A G L +
Sbjct: 306 LIIDEADRVMDQIQNDWLYHLNKHVKQESDE------YLLGRAAGQLS-------QSELF 352
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT------------------GETR-- 339
DKP + K++ SATL+QDP KL L HP T E R
Sbjct: 353 DKPR-QPHKLLFSATLSQDPEKLNTFKLFHPKLFTAVSDPAKRLAALVRHHQQAEEKRGK 411
Query: 340 ----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
Y P L + + K+KPL L AL++ G ++ + FT+S++ +HRL +L
Sbjct: 412 FIGQYATPMELRELVCMTQFKIKPLTLFALIKENGYKRFLCFTNSIDGSHRLSFVLQKMF 471
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ I+E+S R L F GK+ ++ +DA+ RG+D++ ++ V++YD P +I
Sbjct: 472 GTELVIEEWSSSLSPQARKSVLSRFALGKVNGIICTDALARGIDIDDIDVVISYDMPRHI 531
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 503
TYIHR GRT RAG G T+L +E K+F+ L +A P+ SI
Sbjct: 532 NTYIHRIGRTGRAGNRGTSITMLIDEERKKFQSTLAEAGKQ--PLESI 577
>gi|403417594|emb|CCM04294.1| predicted protein [Fibroporia radiculosa]
Length = 707
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 228/507 (44%), Gaps = 126/507 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE---------RDLCINSPTGSGKTLS 85
L + K L +GIS LF VQ AV + P + RDLC+++PTGSGKTL+
Sbjct: 201 LSEKTKKRLLELGISELFAVQTAVVPFLLTPKSLKSLYLPYNPPRDLCVSAPTGSGKTLA 260
Query: 86 YALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 145
Y LPIV+ LS R V LRALVVLPTRDL
Sbjct: 261 YVLPIVEILSTRIVVRLRALVVLPTRDL-------------------------------- 288
Query: 146 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 205
+ QV++ F AI GL +G A GQ S E ++L+ ++ ++
Sbjct: 289 -------VTQVRETFEAIGRGRGLKIGTATGQHSFTHEQAQLVADRSSQSVSLFE----- 336
Query: 206 QELQSAVDILVATPGRLMDHINATR-GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 264
TR G L HL +LV+DE DRLL +++Q WL VL T
Sbjct: 337 -----------------------TRTGSQLMHLRFLVIDEADRLLAQSFQDWLAQVLAAT 373
Query: 265 RSD-NENRFSDASTFLPSAFGSLKTIRRCG---------------VERGFKDKPYPRLVK 308
R N +++ T ++ +TI R V +K K
Sbjct: 374 RPPANPEDLTESRTLADNSMAR-RTIPRADALAPNYLHLLHDVPRVRTDIDEKRESSCQK 432
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFL--------TTGET-----------RYKLPERLESY 349
++ SATLT+DP+K+ L+LH P + T +T ++ +P L +
Sbjct: 433 LLFSATLTRDPSKIVALNLHDPKYFVVRGRADGTAADTEEADLMSLVMEKFTMPSSLSEH 492
Query: 350 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-----------GEL- 397
++C+S KPL L L+ G +VFT S EST RL L F G +
Sbjct: 493 MIVCDSASKPLMLFQLVHGHGVTNALVFTKSAESTTRLMRLFEFFEGAYSGGPDPSGSIP 552
Query: 398 -RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I K YS R L F+ +I +L+ SD ++RG+D+ V++VV+YD P ++
Sbjct: 553 KSIVTKAYSSDLSPGERKLILDKFKNQEIHILICSDLISRGIDISHVSHVVSYDAPIDMR 612
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEV 483
Y+HR GRTARAG+ G +TL+ + EV
Sbjct: 613 KYVHRVGRTARAGRAGDAWTLVEEQEV 639
>gi|164656042|ref|XP_001729149.1| hypothetical protein MGL_3616 [Malassezia globosa CBS 7966]
gi|159103039|gb|EDP41935.1| hypothetical protein MGL_3616 [Malassezia globosa CBS 7966]
Length = 730
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 224/481 (46%), Gaps = 95/481 (19%)
Query: 18 PVDV----SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG--------- 64
P DV +L D P H L P + L+ +GI F VQ AV +
Sbjct: 201 PTDVATTNTLALDTPNTHGVRLSPPVHRQLEQLGIREWFAVQGAVIPALLRDVHAHHLYL 260
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
P RDLCI++PTGSGKTL+Y +PI++ L R + LRAL+++PTRDLA+QV
Sbjct: 261 PYAPPRDLCISAPTGSGKTLAYVVPIIEVLHKRTIPQLRALILVPTRDLAVQV------- 313
Query: 125 CCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 184
+DV A+ GL + G S E
Sbjct: 314 --------------------------------RDVLEAVGKGSGLRYAMITGNHSFRHEQ 341
Query: 185 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
+L++ DV + S DIL+ATPGRL+DH+ TRGFTLEHL YLV+DE
Sbjct: 342 DQLVR----------SDSDVNR---SPTDILIATPGRLVDHLRGTRGFTLEHLRYLVIDE 388
Query: 245 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 304
DRLL +++Q W+PT+L E R + PS + R P
Sbjct: 389 ADRLLGQSFQQWVPTLLDAL----EPRPHSGTCAPPSLWEEAGQEHNHTWTRDDMQVPQA 444
Query: 305 RLVKMVLSATLTQDPNKLAQLDLHHPLFLT------------TGETRYKLPERLESYKLI 352
+ K++ SATLT+DP K+ L L P F+ E + LP L+ + L+
Sbjct: 445 SVQKLLFSATLTRDPAKVGALRLRQPQFIRVRDPGISDGQGLVHEQHFALPAGLQQHMLV 504
Query: 353 CESKLKPLYLVALLQSLGEE-----KCIVFTSSVESTHRLCTLLNHFGEL--------RI 399
+ K LYL+ LL + + + FT SVE+ +RL L+ F E +
Sbjct: 505 APTSQKVLYLLHLLHTPSADTEPLRHALCFTKSVETANRLVRLVAFFEEAWSRHTNTPAL 564
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP-AYIKTY 458
+++ YS R + L+ F+ G I +LV SD + RG+D+ V +V++YD P ++ TY
Sbjct: 565 QVRFYSSDLGTGERIQLLRDFQHGHIDLLVCSDLIARGIDLPHVRHVISYDVPLIWLNTY 624
Query: 459 I 459
I
Sbjct: 625 I 625
>gi|19075832|ref|NP_588332.1| ATP-dependent RNA helicase Dbp6 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74662371|sp|Q76PD3.1|DBP6_SCHPO RecName: Full=ATP-dependent RNA helicase dbp6
gi|3581903|emb|CAA20842.1| ATP-dependent RNA helicase Dbp6 (predicted) [Schizosaccharomyces
pombe]
Length = 604
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 236/521 (45%), Gaps = 103/521 (19%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG 64
K VLP W+ P+ V L + +L LQ I+ F VQ AV +
Sbjct: 104 KNITSVLPKWLAEPITVDPNTTVEFSSL-NISSKLVERLQKQNITRGFAVQAAVLPLLLQ 162
Query: 65 PGL------FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
G + D+C+++ TGSGKTLSY +PIVQ LS+R V LR +V++PTR+L +QV
Sbjct: 163 DGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQV- 221
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
F GL V GQ
Sbjct: 222 --------------------------------------AKTFEYYMSGAGLQVCAWTGQK 243
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
S+ E +L E + +D+LV+TPGRL+DHI F+L+HL
Sbjct: 244 SLRHETYQLNG----------------DENECRIDVLVSTPGRLVDHIRNDESFSLQHLR 287
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRFSD-----ASTFLPSAFGSLKTI 289
Y+V+DE DRLL +++Q W+ TV+ N++ D + TFLP +L
Sbjct: 288 YMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNILDLDQNISPTFLPD-IDTLLPY 346
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------GETR 339
R P P L K+V SATLT+DP+K+A L LH+P + GE
Sbjct: 347 RL----------PSP-LQKLVFSATLTRDPSKIASLKLHNPRLVLVQNKDMEVDDGGEIE 395
Query: 340 -----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST---HRLCTLL 391
+ +P L+ Y + S+ KP+ L L+ S + F S E+ HRL L+
Sbjct: 396 DDAIVFSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTNILCFVKSNEAAARLHRLLELI 454
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
+ ++ + R K + F G + +LV SD M RG+DV NV+NYD
Sbjct: 455 HESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDP 514
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
P +++Y+HR GRTARAG+ G +TL+ E F KL+++
Sbjct: 515 PLSVRSYVHRIGRTARAGREGFAWTLVQSHEGHHFSKLVKQ 555
>gi|195997819|ref|XP_002108778.1| hypothetical protein TRIADDRAFT_52102 [Trichoplax adhaerens]
gi|190589554|gb|EDV29576.1| hypothetical protein TRIADDRAFT_52102 [Trichoplax adhaerens]
Length = 625
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 225/473 (47%), Gaps = 113/473 (23%)
Query: 7 KSMPVLP----WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
+S P+ P W+ P ++ + +D + L + L+ G+S LFPVQ T
Sbjct: 159 QSTPLSPNFPQWIAKPNYINSHDKIKIDQVSYLQKFILKKLKKQGMSHLFPVQ-----ST 213
Query: 63 IGPGLFE-------------RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
I P + + D+C+++PTGSGKTL Y LPI+Q L R+V LRAL+++P
Sbjct: 214 IIPTILKDYQHFGLCTPLPVHDICVSAPTGSGKTLVYVLPIIQVLMRRSVMLLRALILVP 273
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
T DLA QV K VF GL
Sbjct: 274 TADLAYQV---------------------------------------KKVFEQFNEGSGL 294
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
+ A+GQ + E ELI D L +S VDIL+ATPGRL+DHIN T
Sbjct: 295 KIATAIGQRNFKIEQGELI--------------DALGG-RSNVDILIATPGRLIDHINMT 339
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
+ FTLEHL +LV+DE D+LL ++ + + L+ ++ S +P L T
Sbjct: 340 KHFTLEHLRFLVLDEADKLLISSHHQLIMSALKACYK------AEQSQIIPPNKFILHTT 393
Query: 290 RRCGVERGFKDKPYPRLV-----------KMVLSATLTQDPNKLAQLDLHHPLF------ 332
R D P P +V K++ SATLT DP KLA L+L PL
Sbjct: 394 PR--------DPPIPSIVSKYCNNKLPLQKLLFSATLTYDPEKLAPLELFSPLLYQISDQ 445
Query: 333 ---LTTGETRYKL-PERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 388
L+T E Y + P L Y +ICE KPL ++ +Q+L + + FT+S EST RL
Sbjct: 446 KSNLSTNEIDYYVTPAELTEYYIICEPGEKPLTIIHFMQALKHLRVLCFTNSKESTKRLS 505
Query: 389 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
LL+ FG++R+ S + R+ R + +K F G+I +L+ SD + RG+D+E
Sbjct: 506 LLLSIFGDIRVATLS-SEVPRKD-RKRIIKQFSSGEIDLLICSDTVARGIDIE 556
>gi|452825309|gb|EME32306.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 568
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 241/502 (48%), Gaps = 82/502 (16%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSLFPVQVAV--WQETIGPGLFERDLCINSPTGSGKTLS 85
P + L + L+++ IS LF Q V + ++ F D+ + +PTG+GKTL
Sbjct: 14 PYKDVKALPEYIGKRLKSLNISKLFRFQWTVIKYLLSLDRSNFPGDVIVQAPTGTGKTLC 73
Query: 86 YALPIVQTLSNRAVR-CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQ 144
YA+ I+ L +R+ R LR LV++PTR Y FG I E+ Q
Sbjct: 74 YAISILTALKSRSSRPRLRGLVIVPTR------------YLIFAYFGFYDKFLIRELVNQ 121
Query: 145 FDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 204
S+ F++L D+ +GLS G +S++ E ++ I+ +L CY P
Sbjct: 122 LYSV-FLALIGDDDL-----KVLGLS-----GDTSLSSERTKAIESIQLLEDECYSP--- 167
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ-L 263
VDIL++TP RL++HI+ GF + +LV+DETDRLL W+ T+L+ +
Sbjct: 168 ----VWKVDILISTPSRLVEHIHQRVGFEPTTIEFLVLDETDRLLSGQSLDWIETILRHI 223
Query: 264 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 323
+RS + + + +L G K IR K++ SAT T KLA
Sbjct: 224 SRSSDVTSSENRNLYLTGELGLRKPIR-----------------KLLFSATQTSSIAKLA 266
Query: 324 QLDLHHPLFLT-------------------TGETRYKLPERLESYKLICESKLKPL---- 360
L L +P T + +Y LP LE + L+C+S ++ L
Sbjct: 267 NLSLVNPTLFTYKQDDAVRSILLGNSSSEKRSKQKYWLPFALEEFVLLCKSPVEKLVSLV 326
Query: 361 -YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF-------GELRIKIKEYSGLQRQSV 412
YL L SL E IVF SS S HRL L+ + I I E S
Sbjct: 327 WYLKHLDSSLSEAGVIVFASSKISAHRLFRFLSLYFSAGYIESNTAIHIAELSSNLSNRQ 386
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R ++ F K+QV+VSSD TRGMD+E + +V+++D P ++KTY+HR GRTARAG G
Sbjct: 387 RRNVVRDFSLHKLQVVVSSDVATRGMDIENIGHVISFDVPVHVKTYLHRVGRTARAGHKG 446
Query: 473 RCFTLLHKDEVKRFKKLLQKAD 494
T+L + + F+KLL+K D
Sbjct: 447 TGCTILMEHQAHHFRKLLRKID 468
>gi|294949064|ref|XP_002786034.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
gi|239900142|gb|EER17830.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
Length = 559
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/515 (33%), Positives = 235/515 (45%), Gaps = 122/515 (23%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG------PGLFERDLCI 74
+S EDCP L + AL+ MGIS LFPVQ V +G ++ DLC+
Sbjct: 66 LSSIEDCPSVTEFELSKTCRKALKGMGISRLFPVQATVLPIVLGRVRTPVGSRYDCDLCV 125
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIA 134
PTG GKTL Y LPI Q LS+R + LRALV+ PTRDLALQV +A
Sbjct: 126 AVPTGQGKTLGYLLPIFQLLSHRKYQTLRALVLAPTRDLALQVKE-------------VA 172
Query: 135 DHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 194
DH KD F V VGQ A +E E
Sbjct: 173 DHFTGG----------------KDNF---------KVDCVVGQYH-AQTFAE-------E 199
Query: 195 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 254
G P D+LVATP R +D I R ++ + ++V+DE DRLL + +
Sbjct: 200 DGSSAGP-----------DVLVATPSRALDLITGER-VPVDGIRWMVLDEADRLLNSSRE 247
Query: 255 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
A + V R +AS PR +M+ SAT
Sbjct: 248 ATVEVV---------RRVMEAS---------------------------PRCQRMLFSAT 271
Query: 315 LTQDPNKLAQLDLHHPLFLTTGET-RYKLPERLESYKLICES-KLKPLYLVALL------ 366
+T +P KLAQL L P FL + +T + PE L ++ + + KP LV++L
Sbjct: 272 MTSNPQKLAQLALSRPFFLLSTQTGAHATPENLRHRFVVARAEQKKPGVLVSILGEIYPP 331
Query: 367 -QSLGEEKCIVFTSSVESTHRL------CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
S + ++F SVE HRL C + N + IKI+E+S Q R + L+A
Sbjct: 332 TASEATSRTMIFCGSVEHAHRLTRLLQICVVGNENIKEGIKIREFSAALNQKQRVRLLEA 391
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
FR G+I VLV SD RG+D V++V+ YD P ++ YIHR GR RAG+ G T+L
Sbjct: 392 FRTGRIHVLVCSDVAARGLDFREVDHVLQYDVPNNVQGYIHRCGRAGRAGRQGCSSTILV 451
Query: 480 KDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
+VK FK +L++ + ++ +E ++PV
Sbjct: 452 GKQVKHFKDMLREEE-------AVTMDKLEQMKPV 479
>gi|152013488|sp|A2QA23.1|DBP6_ASPNC RecName: Full=ATP-dependent RNA helicase dbp6
gi|134055529|emb|CAK37175.1| unnamed protein product [Aspergillus niger]
Length = 593
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 245/510 (48%), Gaps = 92/510 (18%)
Query: 8 SMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPG 66
S+P PW+ +P+ S E L +D L L++ G F VQ V + GP
Sbjct: 104 SLP--PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPT 160
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
DLCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+ C
Sbjct: 161 NHPGDLCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREA-CELC- 218
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
A GL V AVG +I DE E
Sbjct: 219 -------------------------------------AAGSGLRVASAVGNVAIKDEQRE 241
Query: 187 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 246
+ G + E VDIL+ TPGRL+DH+ T+GFTL++L +LV+DE D
Sbjct: 242 SL------PGYVHRSE-------PNVDILICTPGRLVDHLRYTKGFTLKNLEWLVIDEAD 288
Query: 247 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKPYPR 305
RLL E++Q W+ V+ S + P AFG S + G+ K+ PR
Sbjct: 289 RLLNESFQEWVDVVMT----------SLDARKAPDAFGFSGNFLSGLGLPIQSKE---PR 335
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTG----------------ETRYKLPERLESY 349
K+VLSAT+T+D KL L L +P + G + ++ LP LE +
Sbjct: 336 --KVVLSATMTRDVTKLNSLRLANPKLVVIGSDAAATEDESGGVAPSDEQFTLPPTLEEH 393
Query: 350 KL-ICESKLKPLYLVALLQS--LGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYS 405
+ + + KPLYL+ LL S E K +VFT S ES RL LL L +I
Sbjct: 394 TVSVGDGSQKPLYLLRLLLSHIKLETKILVFTKSSESASRLARLLALLEPSLSDRIGTII 453
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
+ S KTL A+R GKI V++++D +RG+D+ + +VVNYD PA I TY+HR GRT
Sbjct: 454 KSNKSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITTYVHRVGRT 513
Query: 466 ARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
ARAGQ G +TL+ E K F + K +
Sbjct: 514 ARAGQKGSAWTLVAHREGKWFASQIAKGSD 543
>gi|167536143|ref|XP_001749744.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771892|gb|EDQ85553.1| predicted protein [Monosiga brevicollis MX1]
Length = 2519
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 224/461 (48%), Gaps = 98/461 (21%)
Query: 34 CLDPRLKVALQNMGISSLFPVQ-------VAVWQETIGPGLFERDLCINSPTGSGKTLSY 86
L P L+ A+Q + +LFP+Q +A W PG D C+ +PTGSGKTL Y
Sbjct: 177 ALHPELQRAMQRRDMKTLFPLQRAMVPRLIASWNAAGHPG----DFCVCAPTGSGKTLCY 232
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
LPI+ L+ R +RAL+VLPTR LALQV +++ G +++C +
Sbjct: 233 LLPILHLLAERVTPRIRALIVLPTRQLALQV-----VRVARDLLG------ASQLCAGRE 281
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
L +L GQ+S++ E + +LQ
Sbjct: 282 PLRVAAL---------------------TGQTSLSQE------------------QKLLQ 302
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHL--CYLVVDETDRLLREAYQAWLPTVLQLT 264
E ++DI+VATPGRL+DH++ T G + L C+ + LL ++YQ+WL + +
Sbjct: 303 E--QSIDIVVATPGRLVDHLHQT-GKEMGALGACFQPI-----LLTQSYQSWLEALRKAL 354
Query: 265 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 324
E+ SD + F + T RL +++ SATLT+DP KL
Sbjct: 355 YRGRES--SDPMNMTLTRFHAEGT----------------RLQQLLFSATLTRDPEKLEP 396
Query: 325 LDLHHPLFLTTGET-------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 377
L L P + + +P ++ Y + C + +PL L++LL ++ ++F
Sbjct: 397 LRLAFPTMVIASSAHQDDANGKSTIPRSIDEYTVSCTATERPLVLLSLLIGFQMQRVLIF 456
Query: 378 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 437
S++ + R+ LL +F EL + E S Q Q ++ LK F G++ VLV SD M RG
Sbjct: 457 VSALNTAKRVTALLQYFDEL--SVAEVSSSQSQQENTRALKQFAAGELSVLVCSDNMARG 514
Query: 438 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+D++ V V++YD PA+ KTYIHR GR RAG G +TL+
Sbjct: 515 IDIKNVETVISYDAPAFPKTYIHRVGRVGRAGAHGEAYTLV 555
>gi|427792293|gb|JAA61598.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 783
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 234/503 (46%), Gaps = 104/503 (20%)
Query: 48 ISSLFPVQVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
I LFPVQ V W E L RD+C+++PTGSGKTL+Y +PI++ L R VR +
Sbjct: 320 IRKLFPVQEKVVPWLLSSEQRRSHLPPRDICVSAPTGSGKTLAYVIPIIEDLKVRVVRAV 379
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
RA+VVLP ++LA QV++ VF
Sbjct: 380 RAVVVLPVKELAAQVHA---------------------------------------VFLQ 400
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
L+V L G + A+E L+++ + S VDI+VATPGRL
Sbjct: 401 YVGTTSLNVQLVTGTRTFAEEQGLLVRKG-------------AKGYASLVDIVVATPGRL 447
Query: 223 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 282
+DHI T GF L L Y V+DE DR++ + +P V Q +
Sbjct: 448 LDHIRKTPGFNLHLLKYFVLDEADRVIEDVQTTLIPEVEQ------------------AV 489
Query: 283 FGSLKTIRRCGVERGFKDKPYPRLV-----------KMVLSATLTQDPNKLAQLDLHHP- 330
FG+ K CG + +P V K++ SATLTQDP+KL L L P
Sbjct: 490 FGTSKMNCTCGSTVHNRLCTHPLTVCSLQHCREPVQKLLYSATLTQDPDKLQSLMLFQPK 549
Query: 331 LFLTTGET--------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 376
LF T +Y P+ L + + KPL + L+ + G +
Sbjct: 550 LFTATAAVSMPGDEQRQKTFVGKYTTPQGLSEFYYLTHDNTKPLAVWDLVANHGFRDTLC 609
Query: 377 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 436
FT+S E HRL +L G +R + E+S + R++ L+ F GK+ +LV S+ + R
Sbjct: 610 FTASKEDAHRLSLVLKEMGSIRAE--EFSAKLSIADRARVLRKFASGKLDILVCSNVLAR 667
Query: 437 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DN 495
G+DV V +V+ YD P +IKTY+HR GRTARAG G T L + +++ FK++L A
Sbjct: 668 GLDVANVRHVICYDPPKFIKTYVHRVGRTARAGVPGTAVTFLRQGQLQAFKEMLSSAGKT 727
Query: 496 DSCPIHSIPSSLIESLRPVYKSG 518
D P+ + +E+L+ Y+
Sbjct: 728 DIQPLDLSNTDELEALQSKYRDA 750
>gi|294901652|ref|XP_002777458.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
gi|239885094|gb|EER09274.1| ATP-dependent RNA helicase DBP6, putative [Perkinsus marinus ATCC
50983]
Length = 559
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 233/515 (45%), Gaps = 122/515 (23%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG------PGLFERDLCI 74
+S EDCP L + AL+ MGIS LFPVQ V +G ++ DLC+
Sbjct: 66 LSSIEDCPSVTEFELSKTCRKALKGMGISRLFPVQATVLPIVLGRVRTPVGSRYDCDLCV 125
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIA 134
PTG GKTL Y LPI Q LS+R + LRALV+ PTRDLALQV +A
Sbjct: 126 AVPTGQGKTLGYLLPIFQLLSHRKYQTLRALVLAPTRDLALQVKE-------------VA 172
Query: 135 DHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 194
DH KD F V VGQ A +E E
Sbjct: 173 DHFTGG----------------KDSF---------RVDCVVGQYH-AQTFAE-------E 199
Query: 195 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 254
G P D+LVATP R +D I R ++ + ++V+DE DRLL + +
Sbjct: 200 DGSSAGP-----------DVLVATPSRALDLITGER-VPVDGIRWMVLDEADRLLNSSRE 247
Query: 255 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
A + V R +AS PR +M+ SAT
Sbjct: 248 ATVEVV---------RRVMEAS---------------------------PRCQRMLFSAT 271
Query: 315 LTQDPNKLAQLDLHHPLFLTTGET-RYKLPERLESYKLICES-KLKPLYLVALL------ 366
+T +P KLAQL L P FL +T + PE L ++ + + KP LV++L
Sbjct: 272 MTSNPQKLAQLALSRPFFLLGTQTGAHATPENLRHRFVVARAEQKKPGVLVSILGEIYPP 331
Query: 367 -QSLGEEKCIVFTSSVESTHRLCTLL------NHFGELRIKIKEYSGLQRQSVRSKTLKA 419
S + ++F SVE HRL LL N + IKI+E+S Q R + L+A
Sbjct: 332 TASEATSRTMIFCGSVEHAHRLARLLQIYVVGNENIKEGIKIREFSAALNQKQRVRLLEA 391
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
FR G+I VLV SD RG+D V++V+ YD P ++ YIHR GR RAG+ G T+L
Sbjct: 392 FRTGRIHVLVCSDVAARGLDFREVDHVLQYDVPNNVQGYIHRCGRAGRAGREGCSSTILV 451
Query: 480 KDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
+VK FK +L++ ++ +E ++PV
Sbjct: 452 GKQVKHFKDMLREE-------KAVTMDKLEQMKPV 479
>gi|241751464|ref|XP_002406051.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215506028|gb|EEC15522.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 393
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 204/446 (45%), Gaps = 107/446 (23%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RD+C+++PTGSGKTL+Y +PIV++L R +R +RA+VVLP ++LA QV +
Sbjct: 4 RDICVSAPTGSGKTLAYVIPIVESLKPRIMRAIRAVVVLPVKELAAQVQA---------- 53
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
VF L L G ++E L+
Sbjct: 54 -----------------------------VFQQYLRGTSLRSQLVTGTKPFSEEQLSLVH 84
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
+ + S VDI+VATPGRL+DHI T GF+L L + V+DE DR++
Sbjct: 85 KNA-------------RGYSSLVDIIVATPGRLLDHIRKTPGFSLHLLKFFVLDEADRVI 131
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
+ +P V Q K+
Sbjct: 132 EDVRTTLIPEVEQAVEPAQ---------------------------------------KL 152
Query: 310 VLSATLTQDPNKLAQLDLHHP-LFLTTGE-----------TRYKLPERLESYKLICESKL 357
+ SATLTQDP KL L L P LF G+ +Y P+ L + + ++
Sbjct: 153 LYSATLTQDPEKLQSLMLFQPKLFTAAGKRDPAVERAAFAGKYTTPQGLSEFYRVVQNAK 212
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
KPL L L+ + G + FT + + HRLC ++ G +R++ E+S + R++ L
Sbjct: 213 KPLALWDLVANRGYTGTLCFTGTKDDAHRLCLVIKEMGGVRVE--EFSSDLSATERARVL 270
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
+ F G + +LV S+ + RG+DV V NVV YD P Y+KTY+HR GRTARAG G T
Sbjct: 271 RRFASGGLDLLVCSNVLARGLDVANVRNVVCYDPPKYVKTYVHRVGRTARAGVPGTAVTF 330
Query: 478 LHKDEVKRFKKLLQKADNDSCPIHSI 503
L + +++ F+ +L A P+ ++
Sbjct: 331 LRQGQLEAFQTMLSSAGKS--PVEAL 354
>gi|213407706|ref|XP_002174624.1| ATP-dependent RNA helicase dbp6 [Schizosaccharomyces japonicus
yFS275]
gi|212002671|gb|EEB08331.1| ATP-dependent RNA helicase dbp6 [Schizosaccharomyces japonicus
yFS275]
Length = 570
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 248/544 (45%), Gaps = 128/544 (23%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW- 59
++ + +S+ LP W+ +P V+ L L RL L I+ F VQ V
Sbjct: 58 DKKRTRSLQALPDWIANPTVVAPSTTVQFAEL-GLSKRLVELLAQNNITQGFAVQAGVIP 116
Query: 60 ----------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
Q PG DLC+++ TGSGKTL+Y LPI++ L V LR VV+P
Sbjct: 117 LLLQSSNKSIQRAHAPG----DLCVSAATGSGKTLAYVLPIIECLRTCIVTRLRCAVVVP 172
Query: 110 TRDLALQVNSARCKYCCKN---IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 166
T++L +QV + +YC + L S+A F+ LF+S P KD A
Sbjct: 173 TKELVVQVAKSFEQYCSGTKLRVCALTGQRSLA-----FEQSLFLS-PNGKDYIA----- 221
Query: 167 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 226
DI+V TPGR +DHI
Sbjct: 222 ----------------------------------------------DIMVTTPGRFVDHI 235
Query: 227 NATRGFTLEHLCYLVVDETDRLLREAYQAWL---------PTVLQ------------LTR 265
+T FTL+HL YLVVDE DRLL +++Q W+ P VLQ L
Sbjct: 236 RSTPNFTLQHLRYLVVDEADRLLDQSFQGWVNAVMEELERPKVLQGIDMHGLSGIERLPG 295
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
+D+ + + AST+LP+ + T+ K P L K+V SATLT++P K++ L
Sbjct: 296 ADSNSGCNIASTYLPN----MPTL--------LPQKTAPCLQKLVFSATLTRNPAKISAL 343
Query: 326 DLHHPLFLTTGETR--------------YKLPERLESYKLICESKLKPLYLVALLQSLGE 371
L P L + + LP L+ + + ++ KPL L LL++
Sbjct: 344 RLVRPRLLVVQDPSVSMEPDGDEEDTVLFSLPAALQEHHVGVTAE-KPLLLYHLLRTQQL 402
Query: 372 EKCIVFTSSVEST---HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
+ + FT S ES +RL LL+ +++ ++G+ ++ R + L F E +Q+L
Sbjct: 403 QNTLCFTKSNESAARLYRLLELLDKGSSEPLRVGLFAGILTRADRRRILTQFAESNLQLL 462
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
V SD M RG+D+ NV+NYD P+ + Y+HR GR ARAG+ G +TL+ E F
Sbjct: 463 VCSDLMARGVDLPSTENVINYDPPSGTRQYVHRIGRCARAGREGHAWTLVQDHEGFHFSS 522
Query: 489 LLQK 492
++++
Sbjct: 523 IVRR 526
>gi|396489645|ref|XP_003843156.1| hypothetical protein LEMA_P089160.1 [Leptosphaeria maculans JN3]
gi|312219734|emb|CBX99677.1| hypothetical protein LEMA_P089160.1 [Leptosphaeria maculans JN3]
Length = 705
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 249/549 (45%), Gaps = 98/549 (17%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
PW+ PV V ++ P L ++P LQ G + VQ A+ + PG FE+
Sbjct: 145 PWLAKPVTVEATKNVPFSEL-GIEPFFVKKLQKQGFNDALAVQTALL-PMLHPG-FEQHL 201
Query: 71 -DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL---ALQVNSARC---K 123
D+C+++ TGSGKTL+Y LPI++ L +R V L A++V+P+R L ALQV C K
Sbjct: 202 GDICVSAKTGSGKTLAYLLPIIEALKDRVVPVLSAVIVVPSRQLVNQALQVAEELCAGTK 261
Query: 124 YCCKNIFGLIA----DHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
G +A + ++ Q+D L + + +G A +
Sbjct: 262 IKVGTALGNVAFPTEQKQLVKLRAQYDPHRTRELHE--------RASRQFQIGFA-EKGG 312
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
I D++ + P D + + S VDIL+ TPGRL++HI T GF L + +
Sbjct: 313 IFDDLKSM-------------PLDHVPQYDSGVDILICTPGRLVEHIENTTGFLLNAVQW 359
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LV+DE D+LL + +Q W +++ + F +A ++ R +
Sbjct: 360 LVIDEADQLLNQNFQGWAGVLMEALHGETPPDFMNAQE-------RIRMRERDANSKWSV 412
Query: 300 DKPYPR-LVKMVLSATLTQDPNKLAQLDLHHPLF------------LTTGETRYKLPERL 346
P R L K+VLSAT+ +D KL L L P L + ++LP L
Sbjct: 413 ALPARRQLTKVVLSATMEKDLTKLGTLKLKRPKLVVVQDEATEIQPLDHEDNVFELPSTL 472
Query: 347 ESYKL-ICESKLKPLYLVALLQ-------------------------------------- 367
+ + + + KPL+L+ +L
Sbjct: 473 DEVAVHVGDGSNKPLHLLYILLNAVFPGAESGMKQESSDSSSDSSSAEDSEHDEEKEGSL 532
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 426
S + + +VFT S ES RL LL+ R +K + K L++F G I+
Sbjct: 533 SKQQSRVLVFTKSTESASRLSHLLSVLAPNFRKYLKTMTRALTAEASRKLLRSFGTGAIK 592
Query: 427 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+L++SDA +RG+D+ + +V+NYD P I +Y+HR GRTARAG++G +TL K E F
Sbjct: 593 ILIASDAASRGLDIPSITHVINYDLPTSITSYVHRVGRTARAGKVGEAWTLFTKTEAAWF 652
Query: 487 KKLLQKADN 495
K + K D+
Sbjct: 653 LKQVAKGDS 661
>gi|149235381|ref|XP_001523569.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013489|sp|A5E726.1|DBP6_LODEL RecName: Full=ATP-dependent RNA helicase DBP6
gi|146452978|gb|EDK47234.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 663
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 241/505 (47%), Gaps = 117/505 (23%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE--------TI 63
L W+ +P +++ + P P L P + L+++G + F VQV V + +
Sbjct: 207 LDWLTTPEYIAIADTKPFSEFP-LSPFMHENLESLGFENAFAVQVGVLSKLLPEIQANKL 265
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P F D+ +N+ TGSGKTL+Y++PI+++L +R V +RA+V++PT+ L +N R
Sbjct: 266 RPDAFG-DVLVNASTGSGKTLAYSIPIIESLKDRVVPRVRAIVLVPTKPL---INQVR-- 319
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
A + L++G + S+ ++
Sbjct: 320 ----------------------------------------ATMLQLALGTNLNIVSLKND 339
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
IS R + E I P D++++TPGRL++H+ A +L L YLVVD
Sbjct: 340 IS---IREESERLIELVP-----------DVVISTPGRLVEHL-AMDSISLSSLRYLVVD 384
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DRLL +++Q W ++ ++ + + SLK
Sbjct: 385 EADRLLNQSFQNWSQILI--------SKIHLQQVYDVANVWSLK---------------- 420
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICE 354
+ K + SATLT D KLA LD H+P L +++ + +P L YKL + +
Sbjct: 421 --VQKFIFSATLTTDAGKLASLDFHNPRLLIVNDSQRLVNELFSVPAMLSEYKLNFGVAK 478
Query: 355 SKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGL--- 407
S LKPL L L + +EK +VFT S ES+ RLCTLL F + ++ K G
Sbjct: 479 SSLKPLILAKFL--IAQEKLSDVLVFTKSNESSIRLCTLLQAIFDRICLQEKVKVGFMNL 536
Query: 408 --QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
R S+RSK LK F KI +LV++D + RG+DV + +VVNYD + Y+HR GRT
Sbjct: 537 TNNRTSLRSKILKDFTSQKINILVATDLIARGLDVTSIKDVVNYDLLNSSREYVHRVGRT 596
Query: 466 ARAGQLGRCFTLLH-KDEVKRFKKL 489
ARA Q G + L+ K E K FK +
Sbjct: 597 ARANQAGNAYNLVFGKGEEKWFKTI 621
>gi|169598424|ref|XP_001792635.1| hypothetical protein SNOG_02017 [Phaeosphaeria nodorum SN15]
gi|111069109|gb|EAT90229.1| hypothetical protein SNOG_02017 [Phaeosphaeria nodorum SN15]
Length = 648
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 246/548 (44%), Gaps = 109/548 (19%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-------WQETIGP 65
PW+ P V P L +D L++ G VQ A+ +++ +G
Sbjct: 140 PWLAQPTTVESSRTVPFAEL-GVDAHYLKKLESQGFKDALAVQTALLPMLHQGFEQHLG- 197
Query: 66 GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL---ALQVNSARC 122
D+C+++ TGSGKTL+Y LPI++ L +RAV L A+VV+P+R L ALQV C
Sbjct: 198 -----DICVSAKTGSGKTLAYLLPIIEALKDRAVPTLSAIVVVPSRQLVNQALQVAEDLC 252
Query: 123 ---KYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
K G A AE Q V ++ P A G
Sbjct: 253 AGTKIKVGTALGNTAFPPDAEAAGQ--------------VEGSVPPH-------AAGAKD 291
Query: 180 IADEISELIKRPKLEAGICYD-----PEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
+ + S+ + +E G D P+D + + S VDIL+ TPGRL++HI T GF L
Sbjct: 292 LHERASQQFRTGFVEKGGILDDLMNMPQDHIPQYDSGVDILICTPGRLVEHIEHTTGFLL 351
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL-------PSAFGSLK 287
+ +LV+DE D+LL + +Q W ++ + F +A L S + ++
Sbjct: 352 NSVRWLVIDEADQLLNQNFQGWASVLMDALHGETPVDFMNAQERLLKRERDANSMWSAIL 411
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF------------LTT 335
RR +L K+VLSAT+ +D KL L L P L
Sbjct: 412 PARR-------------QLTKIVLSATMEKDLTKLGTLRLKRPKLVVVQDEATEVQPLDH 458
Query: 336 GETRYKLPERLESYKL-ICESKLKPLYLVALLQSL-------GEE--------------- 372
+ ++LP L+ + + + + KPL+L+ +L + GE
Sbjct: 459 EDNNFELPSTLDEFSVHVADGSNKPLHLLYVLLNYVFTGIETGENNEDEDSETGVAEHPS 518
Query: 373 KCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ +VFT S E+ RL LL + +K + K LK+F G+I++L++S
Sbjct: 519 RVLVFTKSTENASRLSHLLATLAPAFKNHLKTMTRALTAEASRKLLKSFGTGEIKILIAS 578
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA----GQLGRCFTLLHKDEVKRFK 487
DA +RG+D+ + +V+NYD P I +Y+HR GRTARA G+ GRC K E F
Sbjct: 579 DAASRGLDIPDITHVINYDMPTSITSYVHRVGRTARAGKSGGKHGRCSP---KTEAAWFI 635
Query: 488 KLLQKADN 495
K + K D+
Sbjct: 636 KQITKGDS 643
>gi|1749726|dbj|BAA13920.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 490
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 151/483 (31%), Positives = 219/483 (45%), Gaps = 101/483 (20%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGL------FERDLCINSPTGSGKTLSYALPIVQTLSN 96
LQ I+ F VQ AV + G + D+C+++ TGSGKTLSY +PIVQ LS+
Sbjct: 27 LQKQNITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSH 86
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R V LR +V++PTR+L +QV
Sbjct: 87 RTVPRLRCVVIVPTRELTVQV--------------------------------------- 107
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
F GL V GQ S+ E +L E + +D+LV
Sbjct: 108 AKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNG----------------DENECRIDVLV 151
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRF 272
+TPGRL+DHI F+L+HL Y+V+DE DRLL +++Q W+ TV+ N++
Sbjct: 152 STPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNI 211
Query: 273 SD-----ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
D + TFLP +L R P P L K+V SATLT+DP+K+A L L
Sbjct: 212 LDLDQNISPTFLPD-IDTLLPYRL----------PSP-LQKLVFSATLTRDPSKIASLKL 259
Query: 328 HHPLFLTT----------GETR-----YKLPERLESYKLICESKLKPLYLVALLQSLGEE 372
H+P + GE +P L+ Y + S+ KP+ L L+ S
Sbjct: 260 HNPRLVLVQNKDMEVDDGGEIEDDAIVLSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLT 318
Query: 373 KCIVFTSSVEST---HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
+ F S E+ HRL L++ ++ + R K + F G + +LV
Sbjct: 319 NILCFVKSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISWFATGDLNLLV 378
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
SD M RG+ NV+NYD P +++Y+HR G TARAG+ G +TL+ E F KL
Sbjct: 379 CSDLMARGIHFSNTQNVINYDPPFSVRSYVHRIGPTARAGREGFAWTLVQSHEGHHFSKL 438
Query: 490 LQK 492
+++
Sbjct: 439 VKQ 441
>gi|336467903|gb|EGO56066.1| hypothetical protein NEUTE1DRAFT_83030 [Neurospora tetrasperma FGSC
2508]
gi|350289862|gb|EGZ71087.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 684
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 242/515 (46%), Gaps = 88/515 (17%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ +P+ V+ P L K+ L G F VQ A + + D+
Sbjct: 203 PWLANPIRVTTETRKPFTELGISVEAAKI-LAIKGFKDAFAVQTAALPLLLPNPDLQGDV 261
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+ +PTGSGKTL+Y LP+VQ ++ LR ++VLPTRDL QV A
Sbjct: 262 VVAAPTGSGKTLAYVLPMVQDIALSQTTKLRGVIVLPTRDLVQQVQQACEACAAAF---- 317
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 192
A + + VG A+G +E +
Sbjct: 318 ----------------------------AGSSGGKRVKVGTAMGNRPFKEEQGRPL---- 345
Query: 193 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 252
P V+Q + VDIL+ TPGRL++HI T+GFTL+++ +LVVDE D+LL +
Sbjct: 346 --------PYHVIQHVPK-VDILICTPGRLVEHITKTKGFTLDYVRWLVVDEADKLLAQD 396
Query: 253 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 312
+Q WL V NE L + + +K PR K++LS
Sbjct: 397 FQQWLDVV-------NEK---------------LAVSKPGARDFAANNKTGPR--KVILS 432
Query: 313 ATLTQDPNKLAQLDLHHP-LFLTTGETRYKL--PERLESYKL-ICESKLKPLYLVALLQS 368
AT+T+D L L L P L + G L P L+ Y + I E LKPLYLV LLQS
Sbjct: 433 ATMTRDITLLNGLKLSRPKLVVLEGAKAGDLAIPATLKEYAIKITEPSLKPLYLVDLLQS 492
Query: 369 -----LGEEKCIVFTSSVESTHRLCTLLNH-----FGELRIKIKEYSGLQRQSVRSKTLK 418
++FT+S +S RL LL+ F L I + + SVR +TL+
Sbjct: 493 KYMAAAFPTTALIFTASNQSALRLSRLLSLLLPPSFAPL---IGTLTSSTKTSVRLRTLR 549
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
AF GK+++LV+SD ++RG+D+ +++V+NYD P +Y+HR GRTARAG+ G+ +TL+
Sbjct: 550 AFTSGKLRILVASDLVSRGIDLSNLDHVINYDLPLSETSYVHRVGRTARAGREGKAWTLV 609
Query: 479 HKDEVKRF-KKLLQKADNDSCPIHSIPSSLIESLR 512
E +RF ++ + + C + +E +R
Sbjct: 610 EFAEARRFWREFVGEGSGAVCNVKRAEGRTVERVR 644
>gi|255726860|ref|XP_002548356.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134280|gb|EER33835.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 608
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 232/506 (45%), Gaps = 113/506 (22%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG---- 64
M L W+ P +S + P + L P + L+NMG SS F VQV+V I
Sbjct: 153 MKNLDWLTEPQYISPSDTKPFNEF-QLSPFMINNLENMGFSSAFAVQVSVLDMMIPEIKA 211
Query: 65 ----PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
P F D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L
Sbjct: 212 HKLMPDPFG-DILVNASTGSGKTLAYSIPIIESLHKRVVPRVRAIILVPTKPL------- 263
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+ QVK F ++ L V SI
Sbjct: 264 --------------------------------INQVKATFLQLSSGTNLQVMALKNDISI 291
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
DE +L+K S DI+V+TPGRL++H+ +L L YL
Sbjct: 292 NDE-KQLLK-------------------NSIPDIIVSTPGRLVEHL-IGDSISLSSLQYL 330
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DRLL +++Q W +L +R + A ++ R V+
Sbjct: 331 VIDEADRLLNQSFQNWSQILL--------DRMNSAI--------NISEEWRLPVQ----- 369
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL--- 351
KMV SATLT D KL+ L P + +++ + +P L YK+
Sbjct: 370 -------KMVFSATLTTDAGKLSSLKFFKPRLIIVNDSKQLVNEIFTVPNTLSEYKIHLG 422
Query: 352 ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLN-HFGELRIKIKE---YSG 406
+ ++ LKPL L L S G+ ++FT S ES+ RL LL F +L I I S
Sbjct: 423 VAKNSLKPLILARFLISKGKLSNVLIFTKSNESSIRLAELLTILFKKLSIDINVSFINST 482
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
R +VR+K LK F I +L+++D + RG+D+ + +V+NYD P + Y+HR GRTA
Sbjct: 483 NNRTAVRTKILKQFSSQGINILIATDLIARGIDLTSITDVINYDLPNSSREYVHRVGRTA 542
Query: 467 RAGQLGRCFTL-LHKDEVKRFKKLLQ 491
RA Q+G ++ K E F L++
Sbjct: 543 RANQVGYAYSFCFGKGENSWFTTLIK 568
>gi|150864672|ref|XP_001383606.2| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6)
[Scheffersomyces stipitis CBS 6054]
gi|158514827|sp|A3LSJ2.2|DBP6_PICST RecName: Full=ATP-dependent RNA helicase DBP6
gi|149385928|gb|ABN65577.2| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6)
[Scheffersomyces stipitis CBS 6054]
Length = 591
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 229/502 (45%), Gaps = 113/502 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW--------QETI 63
L W+ +P+ S + P + P L L+ ++ F VQ+A+ + +
Sbjct: 138 LDWLATPIYASPEDSKPFSEFE-ISPFLLKNLERDNFTTAFSVQIAIMDILLHDIKRNRL 196
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + + D+ +N+ TGSGKTL+Y++PI++ L NR V +RA+V++PT+ L
Sbjct: 197 EPDV-KGDILVNAATGSGKTLAYSIPIIEALHNRVVPRVRAIVLVPTKPL---------- 245
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QVK F ++ LSV SI +E
Sbjct: 246 -----------------------------INQVKATFVQLSRGTNLSVVSLRNDVSIKEE 276
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
+++ P DI+V+TPGRL++HI + + L L +LV+D
Sbjct: 277 GIKIVNSPP--------------------DIIVSTPGRLVEHI-SNKSINLNSLQFLVID 315
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DRLL +++Q W ++ D + +K P
Sbjct: 316 EADRLLNQSFQNWCQVLISSLEGD------------------------VNIAEEWKITPQ 351
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICE 354
K++ SATLT D KL+ L P + + + + +P L Y + +
Sbjct: 352 ----KLIFSATLTTDSGKLSALKFQKPRLVIVNDRKQLVNEIFNVPSSLSEYTIQFGTAK 407
Query: 355 SKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELR--IKIKEYSGLQRQ 410
+ +KPL L LL++ ++FT S E++ RLC LL FG+L + I + +
Sbjct: 408 ASIKPLILAKYLLENNKLSNVLIFTKSNEASIRLCKLLELMFGKLHPSMNIAYINSTNNK 467
Query: 411 S-VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
S +R+K LK F KI +LV++D + RG+D+ + +V+NYD P + Y+HR GRTARA
Sbjct: 468 SAIRTKILKDFSTQKINILVATDLIARGIDILSITDVINYDLPNSSREYVHRVGRTARAN 527
Query: 470 QLGRCFTL-LHKDEVKRFKKLL 490
Q G +TL K E K FKK++
Sbjct: 528 QTGHAYTLCFGKGEAKWFKKII 549
>gi|406601292|emb|CCH47065.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 642
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 149/503 (29%), Positives = 242/503 (48%), Gaps = 112/503 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW-------QETIG 64
L W+ +P + E P + P + L+++G + F Q+ +
Sbjct: 188 LNWLATPEYIKTDEIKPFKDFE-ISPIILKNLKDLGFDNAFATQIKTLGLLLPEINNKLN 246
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
P + DL +N+ TGSGKTL+Y +PI+Q+L NR V LR ++++PT+ L
Sbjct: 247 PNSIKGDLLVNASTGSGKTLAYTIPIIQSLQNRIVPRLRCIILVPTKPL----------- 295
Query: 125 CCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS--SIAD 182
+ QV +I+ + L++ + +G+S ++ D
Sbjct: 296 ----------------------------INQVYKTMDSISKGIDLNI-VTLGKSDLNLQD 326
Query: 183 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 242
E +LIK + DI+++TPGRL+DH+N + L++L + V+
Sbjct: 327 EHLKLIK--------------------NVPDIIISTPGRLVDHLNL-KSIDLKNLQWCVI 365
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL +++Q W + + +T+ ++ N+ ++ S FK
Sbjct: 366 DEADRLLNQSFQDW--SNVLITKLNDVNKGNNISKI-------------------FK--- 401
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR-------YKLPERLESYKLICE 354
P L+KM+ SATLT D KL+ L+ H+P L + E + LP +L + +
Sbjct: 402 -PNLIKMIFSATLTTDSGKLSNLNFHNPRLIIVNNEESILQNDKIFTLPTQLSEHTIKLS 460
Query: 355 SKL---KPLYLVALLQSLG-EEKCIVFTSSVESTHRLCTLLNH-FGELRIK--IKEYSGL 407
S KPLYL+ L + L ++FT S EST RL LL+ +L I I +
Sbjct: 461 SNSSSHKPLYLLKLFEWLKYPHNVLIFTKSNESTLRLSRLLSILVSKLSIPLIISNINSS 520
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
Q +S +SK LK F EG I +L+S+D ++RG+D+ + +V+NYD P + Y+HR GRTAR
Sbjct: 521 QSRSEKSKLLKQFSEGSIHILISTDLISRGIDILTIQHVINYDLPNSSREYVHRVGRTAR 580
Query: 468 AGQLGRCFT-LLHKDEVKRFKKL 489
A G + L+ K EVK + K+
Sbjct: 581 ANNKGDAYNFLIGKGEVKFWNKI 603
>gi|146416595|ref|XP_001484267.1| hypothetical protein PGUG_03648 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 161/508 (31%), Positives = 232/508 (45%), Gaps = 120/508 (23%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S E P +K LQ+ G SS F VQV+V + + I
Sbjct: 176 LDWLATPIYASTTETVPFSSFGLSSSMVK-NLQSNGFSSAFSVQVSVLKLLLPDMESQAI 234
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + DL +N+ TGSGKTL YA+PI+++L NR V +RA+V++PT+ L
Sbjct: 235 RPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRIVPRVRAIVLVPTKPL---------- 283
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QVK FA ++ LSV SI DE
Sbjct: 284 -----------------------------ISQVKATFAMLSKNTNLSVVSLRSDISINDE 314
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVV 242
Q LQ DI+V+TPGRL++H+ T G L+ L YLV+
Sbjct: 315 A---------------------QRLQVVPDIIVSTPGRLVEHL--TNGHINLKSLRYLVI 351
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL +++Q W T+ ++R D+ T+ PS
Sbjct: 352 DEADRLLNQSFQNWCETL--MSRIDSNPILELDQTWRPS--------------------- 388
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---IC 353
+ K+V SATLT D +L+ L L P + + + +P L+ YKL
Sbjct: 389 ---VQKLVFSATLTTDAGRLSMLKLQRPRLIIVNDRHELVNELFTVPATLQEYKLSLGSA 445
Query: 354 ESKLKPLYLVALLQSLGEEKCI---VFTSSVESTHRLCTLLNH----FGELRIKIKEYSG 406
S KPL L L S E+K + VF S E++ RLC LL FG L + + +
Sbjct: 446 RSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEASLRLCRLLQLLFRVFG-LDVTVSYLNS 502
Query: 407 LQR-QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
S R+K LK F + +LV +D + RG+D+ + NV+NYD P + Y+HR GRT
Sbjct: 503 TNNAASTRAKILKDFANQTVHILVVTDLIARGIDIATITNVINYDLPNSSRDYVHRVGRT 562
Query: 466 ARAGQLGRCFTL-LHKDEVKRFKKLLQK 492
ARA Q G +T+ K E K F +L+++
Sbjct: 563 ARANQDGEAYTMCFGKGETKWFTQLVRE 590
>gi|223590192|sp|A5DK47.2|DBP6_PICGU RecName: Full=ATP-dependent RNA helicase DBP6
gi|190347303|gb|EDK39550.2| hypothetical protein PGUG_03648 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 235/508 (46%), Gaps = 120/508 (23%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S E P +K LQ+ G SS F VQV+V + + I
Sbjct: 176 LDWLATPIYASTTETVPFSSFGLSSSMVK-NLQSNGFSSAFSVQVSVLKLLLPDMESQAI 234
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + DL +N+ TGSGKTL YA+PI+++L NR V +RA+V++PT+ L
Sbjct: 235 RPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRIVPRVRAIVLVPTKPL---------- 283
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QVK FA ++ LSV SI DE
Sbjct: 284 -----------------------------ISQVKATFAMLSKNTNLSVVSLRSDISINDE 314
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVV 242
Q LQ DI+V+TPGRL++H+ T G L+ L YLV+
Sbjct: 315 A---------------------QRLQVVPDIIVSTPGRLVEHL--TNGHINLKSLRYLVI 351
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL +++Q W T+ ++R D+ N S+ +T R
Sbjct: 352 DEADRLLNQSFQNWCETL--MSRIDS-NPISELD----------QTWR------------ 386
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---IC 353
P + K+V SATLT D +L+ L L P + + + +P L+ YKL
Sbjct: 387 -PSVQKLVFSATLTTDAGRLSMLKLQRPRLIIVNDRHELVNELFTVPATLQEYKLSLGSA 445
Query: 354 ESKLKPLYLVALLQSLGEEKCI---VFTSSVESTHRLCTLLNH----FGELRIKIKEYSG 406
S KPL L L S E+K + VF S E++ RLC LL FG L + + +
Sbjct: 446 RSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEASLRLCRLLQLLFRVFG-LDVTVSYLNS 502
Query: 407 LQR-QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
S R+K LK F + +LV +D + RG+D+ + NV+NYD P + Y+HR GRT
Sbjct: 503 TNNAASTRAKILKDFANQTVHILVVTDLIARGIDIATITNVINYDLPNSSRDYVHRVGRT 562
Query: 466 ARAGQLGRCFTL-LHKDEVKRFKKLLQK 492
ARA Q G +T+ K E K F +L+++
Sbjct: 563 ARANQDGEAYTMCFGKGETKWFTQLVRE 590
>gi|294657476|ref|XP_459782.2| DEHA2E10912p [Debaryomyces hansenii CBS767]
gi|218512021|sp|Q6BPT8.2|DBP6_DEBHA RecName: Full=ATP-dependent RNA helicase DBP6
gi|199432720|emb|CAG88021.2| DEHA2E10912p [Debaryomyces hansenii CBS767]
Length = 576
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 153/507 (30%), Positives = 233/507 (45%), Gaps = 114/507 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHL--PCLDPRLKVALQNMGISSLFPVQVAVW--------QE 61
L W+ +P+ + E P P L + L+NMG S F VQ++V +
Sbjct: 112 LDWLTTPIYTAPEETKPFAEFQNPPLSSLMIKNLRNMGFESAFSVQISVLNLMLKDIERN 171
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
+ P + DL +N+ TGSGKTL+Y++PI+++L V +RA++++PT+ L
Sbjct: 172 RLQPDM-RGDLLVNASTGSGKTLAYSIPIIESLQTVKVPRVRAIILVPTKPL-------- 222
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
+ QVK ++ LS+ S+
Sbjct: 223 -------------------------------INQVKTTLNQLSKGTNLSI------VSLK 245
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAV-DILVATPGRLMDHINATRGF-TLEHLCY 239
+++S IK E GI +LQ+ DI+V+TPGRL+DH+ T G+ +L++L Y
Sbjct: 246 NDLS--IK----EEGI---------KLQTNEPDIIVSTPGRLVDHL--TNGYISLKNLQY 288
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LV+DE DRLL +++Q W L S I+ + +K
Sbjct: 289 LVIDEADRLLNQSFQNW-------------------CQILISKIDEFTNIKERNISNSWK 329
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL-- 351
+ KM+ SATLT D KL+ L H P + + LP L +KL
Sbjct: 330 ----LNVQKMIFSATLTTDAGKLSLLKFHKPRLIIVNNKEQLVNEMFSLPATLNEFKLQF 385
Query: 352 -ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCT----LLNHFGELRIKIKEYS 405
+S LKPL L L S + ++FT S +++ RL ++N G I I +
Sbjct: 386 GSAKSSLKPLILSKFLLSKNKLANVLIFTKSNDASLRLSRLLSLIMNKLGSETINIAYIN 445
Query: 406 GLQRQ-SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
SVRSK LK F + I +LV++D + RG+D+ + +V+NYD P + Y+HR GR
Sbjct: 446 STNNTTSVRSKILKDFSKQTINILVATDLIARGIDILSITDVINYDLPNSSREYVHRVGR 505
Query: 465 TARAGQLGRCFTL-LHKDEVKRFKKLL 490
TARA Q G + K E K FKKL+
Sbjct: 506 TARANQEGFAYNFCFGKGEAKWFKKLM 532
>gi|238880181|gb|EEQ43819.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 606
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 221/499 (44%), Gaps = 116/499 (23%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
P SP D F D L + L+ MG + F VQ++V + ++
Sbjct: 160 PQYASPSDKKAFTDFKLSSFMIKN------LEKMGFTEAFSVQISVLNMMLPEIEAQKLK 213
Query: 71 -----DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYC 125
D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L
Sbjct: 214 PDRVGDILVNASTGSGKTLAYSIPIIESLYRRVVPRVRAIILVPTKPL------------ 261
Query: 126 CKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 185
+ QVK ++ L + SI DE
Sbjct: 262 ---------------------------INQVKSTLLQLSSGTNLQIAALKNDVSINDEKD 294
Query: 186 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 245
L K S DI+V+TPGRL++H+ L L YL++DE
Sbjct: 295 SLTK--------------------SVPDIIVSTPGRLVEHL-LNDSINLSSLQYLIIDEA 333
Query: 246 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR 305
DRLL +++Q W +L S ++ + + V+
Sbjct: 334 DRLLNQSFQNWSNVLLDKIDSQ----------------INIAEVWKLSVQ---------- 367
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESK 356
K+V SATLT D KL+ L ++P + +++ + +P L +K+ + ++
Sbjct: 368 --KLVFSATLTTDAGKLSSLKFYNPRLIIVNDSKQLVNEIFTVPVTLSEFKIHLGVAKNS 425
Query: 357 LKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNH-FGELRIKIKE---YSGLQRQS 411
LKPL L L S + ++FT S ES+ RL LL F +L I +K S R S
Sbjct: 426 LKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLTSLFQKLSINLKIAFINSTNNRTS 485
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
+RSK LK F ++ +L+++D + RG+DV + +V+NYD P + Y+HR GRTARA Q+
Sbjct: 486 IRSKILKQFSNQEVNILITTDLIARGIDVASITDVINYDLPNSSREYVHRVGRTARANQV 545
Query: 472 GRCFTL-LHKDEVKRFKKL 489
G ++ K E F KL
Sbjct: 546 GYAYSFCFGKGENSWFNKL 564
>gi|156847460|ref|XP_001646614.1| hypothetical protein Kpol_1028p29 [Vanderwaltozyma polyspora DSM
70294]
gi|160380624|sp|A7TFZ9.1|DBP6_VANPO RecName: Full=ATP-dependent RNA helicase DBP6
gi|156117293|gb|EDO18756.1| hypothetical protein Kpol_1028p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 637
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 219/473 (46%), Gaps = 124/473 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSG 81
+DP+L +Q + FP+Q ++ ET+ P L F R D+ +N+ TGSG
Sbjct: 182 IDPKLLKNIQQNFSTDTFPIQ-SILLETLLPTLNFSYNITKKNFTRRVGDVLVNASTGSG 240
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
KTL+Y++PI+Q LS R V LRALV++PT+ L
Sbjct: 241 KTLAYSIPILQILSKRTVNKLRALVIVPTKLL---------------------------- 272
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 201
+ QV + F +A L V ++ ++S+ +E +L
Sbjct: 273 -----------INQVYETFNNLAQGTSLIVSISKLENSLKEENKKL-------------- 307
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
LQ+ DIL+ TPGRL+DH+ + L +L +LV+DE DRLL +++Q W +L
Sbjct: 308 ------LQNEPDILITTPGRLVDHLQSG-AVNLRNLKFLVLDEADRLLNQSFQNWCNELL 360
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
++D ++ +P +VKMV SATLT + K
Sbjct: 361 NKLKTDKQDH-------MPG-----------------------NIVKMVFSATLTTNTEK 390
Query: 322 LAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVF 377
L L ++P LF+ Y LP L+ Y L ++ KPL+L+ LL + K +VF
Sbjct: 391 LHGLQFYNPKLFVMDSVKLYHLPRMLQEYNLHIPTAKTSYKPLFLLRLLSEINGSKMLVF 450
Query: 378 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA------------FREGKI 425
S ES+ RL +LL + I+ K S SV S KA K+
Sbjct: 451 VKSNESSLRLASLL----SIMIEHKLGSQFDINSVNSNNTKAENRRIVNEFASNNNTSKV 506
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
QVL+++D M+RG+D+ + +V+NYD P + YIHR GRTARA G + +L
Sbjct: 507 QVLITTDVMSRGVDINDITDVLNYDVPISSQQYIHRCGRTARAQSKGTAYNML 559
>gi|367009624|ref|XP_003679313.1| hypothetical protein TDEL_0A07700 [Torulaspora delbrueckii]
gi|359746970|emb|CCE90102.1| hypothetical protein TDEL_0A07700 [Torulaspora delbrueckii]
Length = 627
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 219/470 (46%), Gaps = 118/470 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQE----------TIGPGLFER--DLCINSPTGSGK 82
+ P+L ++ ++ FP+Q A+ + T L R D+ +N+ TGSGK
Sbjct: 177 MQPKLLQNVEKYFSANSFPIQTALLENLLPILNFSLSTTKKHLTRRVGDVLVNASTGSGK 236
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++PIVQ LS R V LRAL+++PT+ L
Sbjct: 237 TLAYSIPIVQLLSKRTVNRLRALIIVPTKLL----------------------------- 267
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
+ QV D +A GL + ++ ++S+ +E +
Sbjct: 268 ----------INQVYDTINKLAQGTGLIISISKLENSLKEEHKKF--------------- 302
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
+QS D+L+ TPGRL+DH+ + ++++L L++DE D LL +++Q W P +L
Sbjct: 303 -----MQSEPDVLIITPGRLVDHL-QMKSISMKNLQMLILDEADHLLNQSFQNWCPRLL- 355
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
S + K +R G ++KMV SATLT + KL
Sbjct: 356 ------------------SQITAEKHDQRPG-----------NVIKMVFSATLTTNTEKL 386
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFT 378
L+L++P LF+ Y LPE+L+ Y + +S KPL L+ LL + K +VF
Sbjct: 387 HGLNLNNPRLFIMDSVKLYSLPEKLQEYIVNIPTSKSLYKPLILLHLLDHMKSAKVLVFV 446
Query: 379 SSVESTHRLCTLLN----------HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
S E++ RL LLN H E I G ++ V +K A E K ++L
Sbjct: 447 KSNEASLRLACLLNILIDQNLAQRHIVET-INSNNSKGENKRLV-NKFASAECESKNRIL 504
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+++D M+RG+D+ +++V+NYD P + Y+HR GRTARA G + LL
Sbjct: 505 ITTDLMSRGIDINDISDVINYDLPISSQQYVHRCGRTARAQSKGNAYNLL 554
>gi|358255930|dbj|GAA57535.1| ATP-dependent RNA helicase DDX51/DBP6, partial [Clonorchis sinensis]
Length = 1092
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 256/587 (43%), Gaps = 141/587 (24%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG--------PGLFE 69
P D+S + ++ L L+P ++ L ++G S LFPVQ V + P
Sbjct: 517 PSDLSFRQK--VEDLKELNPFMQSRLVDIGCSELFPVQACVIPSILRSYRLNKRRPLCRP 574
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
D+CI +PTGSGKTL+Y++P++Q L R LRALV+LP RDLA QV
Sbjct: 575 SDICIAAPTGSGKTLAYSIPLIQLLHGRVQVFLRALVILPVRDLAAQV------------ 622
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
F ++ D +AE S L I +I P L + L G S E +L+
Sbjct: 623 FQVLLD--LAEGTDLRVSCLLIC------TNCSITP---LQIVLINGSKSFMKEQLDLVD 671
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
A + DI+VATPGRL+DHI T GF+LE L LV+DE DR++
Sbjct: 672 TTSSVA-------------HTKADIVVATPGRLVDHIYNTVGFSLERLRILVIDEADRVI 718
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF-----GSLKTIRRCGVERG------- 297
E Q W R + + + P+AF G + R G++R
Sbjct: 719 SEEKQDWY-------------RILEDALYHPNAFAFDIDGEIGYRRPTGLQRTRPVMTIM 765
Query: 298 --FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKLIC- 353
+ L K++ SATLT DP L + +L+ P LF ++ + R + ++C
Sbjct: 766 HQYDTSHDITLQKILASATLTHDPEPLKRFNLYFPHLFASSTSAQ----PRNSNGPIVCD 821
Query: 354 -----ESKLKP--------LYLVALLQSLGEEKCI--------------VFTS------- 379
E L+P +AL + + VF++
Sbjct: 822 IGHAVEPDLEPPMKKKKKQKKKIALSEGMAHNASHTDCSETVQDAGGVGVFSTPPGLKEY 881
Query: 380 --SVESTHR---LCTLLNH---------------FGELRIKIKEYSGLQRQSV------- 412
+V+ HR L L+ H L + + + G++ +
Sbjct: 882 VVAVQPEHRALFLIHLIRHENVKRVLCFTNSRTTAARLHMLLSNFKGIRSYRISGHMPPD 941
Query: 413 -RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R + L AF ++ VLV +D+M RGMDV+ VN VV+Y+ P +K Y+HR GRTARAGQ
Sbjct: 942 KRQRVLSAFTRNELDVLVCTDSMARGMDVKEVNCVVSYEMPPNVKIYVHRVGRTARAGQP 1001
Query: 472 GRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
G +TLL+K++ FKK L+ + +S L+ YK
Sbjct: 1002 GLAYTLLNKNQFFHFKKDLRAVGKQKLKEVTFHASHFAHLQEEYKQA 1048
>gi|159485610|ref|XP_001700837.1| hypothetical protein CHLREDRAFT_167836 [Chlamydomonas reinhardtii]
gi|158281336|gb|EDP07091.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 321
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 144/277 (51%), Gaps = 56/277 (20%)
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
LC VVDETDRLLR++YQ WLP VL + S L
Sbjct: 98 LCEAVVDETDRLLRQSYQEWLPRVLA--------QLSPQHAVLQQHL------------- 136
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
+V+SATLT+DP KL +L LHHP RY L
Sbjct: 137 -----------HIVVSATLTRDPAKLQRLALHHP--------RYPLALLALLADASAAG- 176
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
E IVFTSS+E TH+L +L+ G+L K+ EYS R+
Sbjct: 177 ---------------ESVIVFTSSLEMTHKLYLMLSAVGDLAGKVVEYSSHVPAKERASG 221
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L+ FR+G +VLV+SDAMTRGMDV+ V V+NYD P Y KTY+HRAGRTARAG+ GR T
Sbjct: 222 LERFRKGDAKVLVASDAMTRGMDVDCVQAVINYDAPVYAKTYVHRAGRTARAGKSGRVVT 281
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRP 513
LL ++++ FK +++KADN+ +P+ +ES RP
Sbjct: 282 LLRDEDMRHFKAMIRKADNNFVRELKLPAERVESFRP 318
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 8/91 (8%)
Query: 35 LDPRL-KVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
+D RL V L+ + LFPVQ AVWQ + G DLC+ +PTGSGKTL+YALP+V
Sbjct: 1 MDQRLVPVLLKAFSFTELFPVQAAVWQHSAGGRSTAHDLCVAAPTGSGKTLAYALPVVNA 60
Query: 94 LSN-------RAVRCLRALVVLPTRDLALQV 117
L++ R++ L+ALVVLPTRDLA QV
Sbjct: 61 LADTTSHKHSRSLGRLQALVVLPTRDLAAQV 91
>gi|401840382|gb|EJT43223.1| DBP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 629
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 239/534 (44%), Gaps = 139/534 (26%)
Query: 30 DHLPCLDPRLKVALQNM---GISSLFPVQVAVWQETIGPGL----------FER---DLC 73
D+ L+P+L LQN+ ++ FP+Q ++ ++I P L F R D
Sbjct: 176 DYKNELEPKL---LQNICKNFSTNAFPIQ-SIILDSILPILNFTLNVSKRYFTRRIGDTL 231
Query: 74 INSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+N+ TGSGKTL+Y++P+VQTLS R + LR L+V+PT+ L QV++ K
Sbjct: 232 VNAATGSGKTLAYSIPVVQTLSRRKINRLRCLIVVPTKLLINQVHTTLTK---------- 281
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
+ + L V +A ++S+ DE + + L
Sbjct: 282 -----------------------------LTQGMSLIVSIAKLENSLKDEHKKFLN---L 309
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
E DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++
Sbjct: 310 EP-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSF 351
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
Q W P ++ ++D + F ++KM+ SA
Sbjct: 352 QGWCPKLVFHLKTDKLDTFPG------------------------------NVIKMIFSA 381
Query: 314 TLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSL 369
TLT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ +
Sbjct: 382 TLTTNTEKLNDLNLYKPKLFLKQTDKLYQLPSKLREFNINVPTAKSIYKPLILLYSIDQF 441
Query: 370 -----GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR-------------QS 411
K ++F S ES+ RL LL E R + + LQ QS
Sbjct: 442 IAHLSDASKILIFVKSNESSIRLTKLLQLISESRSQSNIFRNLQNLEMVINSVNSNHPQS 501
Query: 412 VRSKTLKAF----REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
K + F + I +L+++D M+RG+D+ + V+NYD P + Y+HR GRTAR
Sbjct: 502 ENKKIVANFSNRSKSASINILITTDVMSRGIDINDITQVINYDPPMSSQQYVHRVGRTAR 561
Query: 468 AGQLGRCFTLL-HKDEVKRFKKLLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
A + G + LL + E F L + D D + + +L+ES +Y S
Sbjct: 562 ANETGSAYNLLVGRGERTFFDDLNKDLDRDGKSVAPLELDFTLLESDSELYHSS 615
>gi|320581353|gb|EFW95574.1| ATP-dependent RNA helicase DBP6 (DEAD-box protein 6) [Ogataea
parapolymorpha DL-1]
Length = 549
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 233/513 (45%), Gaps = 112/513 (21%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPL-DHLPCLDPRLKVALQN-MGISSLFPVQVAVW 59
+E K K+ L W+ +P + + P D P LDP + L+ GI+S F VQ+ V
Sbjct: 71 QEQKNKN---LNWLSTPEYHNTTQTKPFKDFEPALDPVIIFNLETKFGITSAFSVQINVI 127
Query: 60 Q--------ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ I P F D +N+ TGSGKTL+Y +PIVQ+L R V LR ++++PT+
Sbjct: 128 ESLLKDISANKIDPTPF-GDYLVNASTGSGKTLAYLIPIVQSLIGRVVPRLRCIILVPTK 186
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
L QV S NI L I + ++ D +S+ + AAI P
Sbjct: 187 PLITQVYS--------NILQLTKGLDINALALRSD----VSVKEEAKKLAAIKP------ 228
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
DI+V+TPGRL++H+ G
Sbjct: 229 -----------------------------------------DIVVSTPGRLVEHL--LNG 245
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
L L +LVVDE DRLL +++Q W T++ T+ +N+ ++ + F S T++
Sbjct: 246 MDLSQLRFLVVDEADRLLNQSFQNWCDTLI--TKLENDQKYGEGEDFYNSY-----TVK- 297
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPER 345
C K++ SATLT D KL L L P + Y++P
Sbjct: 298 CS--------------KLIFSATLTTDSEKLFHLKLFKPKLVVINNAEQLVNELYQIPPN 343
Query: 346 LESYKLICESKL---KPLYLVALL-QSLGEEKCIVFTSSVESTHRLCTLLNHFGE---LR 398
L+ + KL KP+ L+ L Q +VFT S ES RL LL E L
Sbjct: 344 LDEKFVRVNEKLAFFKPMVLLRYLEQPEYSSHGLVFTKSNESAIRLARLLTLLSEKLGLD 403
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ I + + R+K LK F E + +L+++D + RGM++E + V+NYD P K Y
Sbjct: 404 LNIMSVNYSLKSHERAKILKKFHE-EGGILIATDLIARGMNIESIKFVLNYDLPLSTKEY 462
Query: 459 IHRAGRTARAGQLGRCFTLLHKD-EVKRFKKLL 490
IHR GRTARA + G TL D + + FK+L+
Sbjct: 463 IHRVGRTARANRHGTAVTLCFGDGDFRWFKRLV 495
>gi|378754810|gb|EHY64839.1| hypothetical protein NERG_02242 [Nematocida sp. 1 ERTm2]
Length = 421
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 212/479 (44%), Gaps = 111/479 (23%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQ 92
LD L AL GI+ P ++ Q+ + L R + S TG+GKTL+Y LPI+
Sbjct: 12 TLDTSLVEALAKKGITQ--PTEI---QKLMLTNLVNRQSILAISNTGTGKTLAYLLPIMH 66
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
TL + A+V+LPTR+L+ QV++
Sbjct: 67 TLLQDD-KYFYAMVILPTRELSQQVHA--------------------------------- 92
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
V A I +GL L +G + + + L RP
Sbjct: 93 ------VLADIGAEIGLRTSLLIGATDLLSQGKSLAARPH-------------------- 126
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
I++ TPGR+ H+ T+G ++ YLV+DE DRLL + + +L++
Sbjct: 127 -IVIGTPGRINHHLRNTKGISVSSFKYLVLDECDRLLDNDFDGDINNILEM--------I 177
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
S TFL SATLT+ N + +++PL
Sbjct: 178 SPKYTFL-------------------------------FSATLTKRVNAFKEKRMNNPLL 206
Query: 333 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
+ +PE + + K K +YL +++ +LG KCIVF + + R+ +L
Sbjct: 207 YNVQKDE-GIPENILQQYIYLPQKYKEMYLYSIVHNLGSRKCIVFVKTCITAERIERILR 265
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
GE I G + Q +R++T++ FR GK +L+S+D + RGMD++G+ ++NYD P
Sbjct: 266 FLGESVCSIH---GNKTQDIRTETIEMFRRGKHSILISTDVVARGMDMDGIKVIINYDMP 322
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 511
K YIHR GRT RAG++G TL+ + +V F+KL K N +S+ S LI SL
Sbjct: 323 DGHKEYIHRIGRTGRAGEVGSSITLVTQYDVDDFRKLEVKL-NKKMDEYSVSSELIYSL 380
>gi|345563939|gb|EGX46922.1| hypothetical protein AOL_s00097g348 [Arthrobotrys oligospora ATCC
24927]
Length = 668
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 223/529 (42%), Gaps = 127/529 (24%)
Query: 11 VLP-WMRSPVDVSLFEDCPLDH--LPCLDPRLKVALQNMGISSLFPVQVAVW-----QET 62
VLP ++ P V + P + LP L L L+ +G FPVQ A+
Sbjct: 169 VLPSYLSQPTTVPTSQRPPFESFGLPEL---LLSRLEKLGFKDTFPVQSALLPLLLPDNR 225
Query: 63 IGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARC 122
+ P DL +++ TGSGKTLSY LPI+ +L NR V AL+++PT +LA QV R
Sbjct: 226 LPPSTPRSDLLVSAATGSGKTLSYLLPILASLINRIVPHTYALIIVPTHELATQVQ--RT 283
Query: 123 KYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIAD 182
+ ++A L + A+G S
Sbjct: 284 AH-------------------------------------SLAAGTSLKISTAIGTRSFEV 306
Query: 183 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 242
E +I G DIL+ATPGRL++HI FTL HL +LVV
Sbjct: 307 EKDHIIANDIGSTG---------------ADILIATPGRLVEHIRNNPQFTLRHLQWLVV 351
Query: 243 DETDRLLREAYQAWLPTV---LQ--LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
DE DRLL +++Q W+ V LQ +R D + F S L + + T+R
Sbjct: 352 DEADRLLSQSFQDWVEVVGDELQKPFSREDEQGGFDITSMGLRTPKRAADTVR------- 404
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------------GETR-- 339
K++LSAT+T+D +LA L L P + GE +
Sbjct: 405 ----------KVILSATMTRDVGRLAGLKLRRPQLIAVDDIGGQEMAIDGSDNDGEDQET 454
Query: 340 --------YKLPERLES-YKLICESKLKPLYLVALL-QSLGEEKCIVFTSSVESTHRLCT 389
LP LE Y + KPL L LL S + +VFT S ES RL
Sbjct: 455 ADKGLRELNSLPSTLEEHYYPVSNPTQKPLILAKLLSDSQTKSGILVFTKSNESASRLAR 514
Query: 390 LLN-----HFGELR-------IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 437
LL G+ R +I + +R+ S F+ I +L+S+D M RG
Sbjct: 515 LLELLFAKKLGKKRKGSSGKDWRIAVSTSDKRKKEISANTSKFKASTIDILISTDLMGRG 574
Query: 438 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+D+ V+NYD P K YIHR GRTARAG G ++L+ E + +
Sbjct: 575 VDLPNAQLVINYDSPRNEKDYIHRVGRTARAGNKGITWSLVEDSEARWW 623
>gi|391327051|ref|XP_003738021.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Metaseiulus
occidentalis]
Length = 429
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 209/469 (44%), Gaps = 77/469 (16%)
Query: 54 VQVAVWQETIGP-----GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
+Q V +E + P GL RD+C+ +PTGSGKTL+Y LP+++ L + +RA+++L
Sbjct: 1 MQKQVIRELLDPRYDIMGLPPRDICVAAPTGSGKTLAYVLPLIKLLKGLFEKAIRAVILL 60
Query: 109 PTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG 168
PT +LA QV DVF A
Sbjct: 61 PTSELA---------------------------------------KQVYDVFTRYAAPFQ 81
Query: 169 LSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINA 228
LS L G S ++E+ L++R VD+++ATP ++H+
Sbjct: 82 LSAALLTGLKSHSEEVKTLLERG-----------------HPIVDVVIATPKTFLNHLRL 124
Query: 229 TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKT 288
T GF L + +LV+DE DR++ + V +N D++ S G+ +
Sbjct: 125 TPGFNLRLVSHLVLDEADRMVDMVIHGLIREV------ENAIYVDDSARCRCSEIGNFER 178
Query: 289 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE------TRYK 341
R + D L K++ SATL DP KL ++L +P +F E +
Sbjct: 179 SRPTAISCCTMDAHSLPLRKLLYSATLMSDPEKLRHVNLFYPRVFHAKAEHANRSDKAFA 238
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
LP+ LE K+ C+ ++PL + L + IVF S E HRL ++ G K+
Sbjct: 239 LPDSLEERKIFCDIDVRPLLVWWLFVHQKMGRMIVFARSREECHRLRIVIEFMGS--CKV 296
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
+ S ++ R K L F EG +++++ ++RGMD++ V +VV Y P + Y+H
Sbjct: 297 VDLSADMKKRQRQKALADFDEGLCDMIIATQVLSRGMDLKSVEHVVLYHAPTSAEDYVHM 356
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP-IHSIPSSLIE 509
GRTARA + G+ LL E + K L+ N PSSL E
Sbjct: 357 VGRTARANKQGKSLVLLSPAENAKLSKTLKAISNSKVKEFQWDPSSLRE 405
>gi|255710965|ref|XP_002551766.1| KLTH0A07084p [Lachancea thermotolerans]
gi|238933143|emb|CAR21324.1| KLTH0A07084p [Lachancea thermotolerans CBS 6340]
Length = 628
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 219/457 (47%), Gaps = 121/457 (26%)
Query: 52 FPVQVAV---------WQETIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 99
FPVQ + + +++ F R D+ +N+ TGSGKTL+Y++P+VQ LS R V
Sbjct: 200 FPVQTVILDTVVPKMNFAQSVNKKSFPRRVGDILVNASTGSGKTLAYSIPVVQCLSKRTV 259
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
LR L+V+PT+ L QV F++L+ +S
Sbjct: 260 NRLRCLIVVPTKILIHQV---------------------------FETLVKLS------- 285
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L G++ ++S+ +E K +A +P DILV TP
Sbjct: 286 -----QGTSLITGISKLENSLREE------HRKFQAQ---EP-----------DILVITP 320
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL+DH+ F+L++L +L++DE DRLL +++Q W +++ ++D
Sbjct: 321 GRLVDHLQLN-TFSLKNLKFLILDEADRLLNQSFQNWCSVIMERLKTD------------ 367
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYP-RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE 337
K++ +P ++KMV SATLT + KL L L+ P LF+
Sbjct: 368 -------------------KEEMHPVSVIKMVFSATLTTNTEKLHGLQLNRPSLFMMDSV 408
Query: 338 TRYKLPERLESYKL---ICESKLKPLYLVALLQSLG--EEKCIVFTSSVESTHRLCTLLN 392
Y LP++L+ + + +S KPL+ + L+ +L + + +VF S E++ RL TLL
Sbjct: 409 KLYHLPKQLQEFNIKIPTAKSFAKPLFALQLIAALSPTDPRILVFVRSNEASIRLATLLE 468
Query: 393 HFG-------ELRIKIKEYSGLQRQSVRSKTLKAFR----EGKIQVLVSSDAMTRGMDVE 441
E R +I + + + SK +K F E ++LV++D M+RG+D+
Sbjct: 469 ILVNNKVLPIEFRTQIASINSNNTKGLNSKLIKQFASSSPEKVTKILVATDLMSRGIDIN 528
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V++V+NYD P + Y+HR GRTARA G F LL
Sbjct: 529 NVSHVINYDLPISSQQYVHRCGRTARAQASGEAFNLL 565
>gi|68490215|ref|XP_711056.1| hypothetical protein CaO19.11188 [Candida albicans SC5314]
gi|68490244|ref|XP_711043.1| hypothetical protein CaO19.3704 [Candida albicans SC5314]
gi|74656092|sp|Q59MW2.1|DBP6_CANAL RecName: Full=ATP-dependent RNA helicase DBP6
gi|46432316|gb|EAK91804.1| hypothetical protein CaO19.3704 [Candida albicans SC5314]
gi|46432330|gb|EAK91817.1| hypothetical protein CaO19.11188 [Candida albicans SC5314]
Length = 606
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 221/499 (44%), Gaps = 116/499 (23%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
P SP D F D L + L+ MG + F VQ++V + ++
Sbjct: 160 PQYASPSDKKAFTDFKLSSFMIKN------LEKMGFTEAFSVQISVLNMMLPEIEAQKLK 213
Query: 71 -----DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYC 125
D+ +N+ TGSGKTL+Y++PI+++L R V +R ++++PT+ L
Sbjct: 214 PDRVGDILVNASTGSGKTLAYSIPIIESLYRRVVPRVRVIILVPTKPL------------ 261
Query: 126 CKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 185
+ QVK ++ L + SI DE
Sbjct: 262 ---------------------------INQVKSTLLQLSSGTNLQIAALKNDVSINDEKD 294
Query: 186 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 245
L K S DI+V+TPGRL++H+ L L YL++DE
Sbjct: 295 SLTK--------------------SVPDIIVSTPGRLVEHL-LNDSINLSSLQYLIIDEA 333
Query: 246 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR 305
DRLL +++Q W +L S ++ + + V+
Sbjct: 334 DRLLNQSFQNWSNVLLDKIDSQ----------------INIAEVWKLSVQ---------- 367
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESK 356
K+V SATLT D KL+ L ++P + +++ + +P L +K+ + ++
Sbjct: 368 --KLVFSATLTTDAGKLSSLKFYNPRLIIVNDSKQLVNEIFTVPVTLSEFKIHLGVAKNS 425
Query: 357 LKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLL-NHFGELRIKIKE---YSGLQRQS 411
LKPL L L S + ++FT S ES+ RL LL + F +L I +K S R S
Sbjct: 426 LKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLISLFQKLSINLKIAFINSTNNRTS 485
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
+RSK LK F ++ +L+++D + RG+DV + +V+NYD P + Y+HR GRTARA Q+
Sbjct: 486 IRSKILKQFSNQEVNILITTDLIARGIDVASITDVINYDLPNSSREYVHRVGRTARANQV 545
Query: 472 GRCFTL-LHKDEVKRFKKL 489
G ++ K E F KL
Sbjct: 546 GYAYSFCFGKGENSWFNKL 564
>gi|307104244|gb|EFN52499.1| hypothetical protein CHLNCDRAFT_138879 [Chlorella variabilis]
Length = 576
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 324 QLDLHHPLFLTTG--ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 381
+L LH P ++ + RY+LP L+ KL+ ++ KP L ALLQ L E+ IVFTSSV
Sbjct: 295 RLGLHCPRYIAMSAVDHRYQLPRSLQELKLVVPAERKPAALAALLQELRGEQTIVFTSSV 354
Query: 382 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
E+THRL LL L + E+S L + R+ L+AFR GK +VLV SDAMTRGMDV
Sbjct: 355 EATHRLHLLLAALPCLPDRAVEFSSLVAPAERAARLEAFRSGKAKVLVCSDAMTRGMDVA 414
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
GV NVVNYD P Y+KTY+HRAGRTARAG+ GR FTLL ++V+ FK +L+KADN H
Sbjct: 415 GVANVVNYDAPVYVKTYVHRAGRTARAGRAGRVFTLLRHEDVRHFKGMLRKADNTFVRAH 474
Query: 502 SIPSSLIESLR 512
+ +E++R
Sbjct: 475 RLAKGALEAVR 485
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 126/237 (53%), Gaps = 59/237 (24%)
Query: 7 KSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG 66
K+ PVLPWMR P+ + E L+ + LDPRL+ AL+ GI LFPVQ W+ET G
Sbjct: 117 KAAPVLPWMRVPIAIEASEGTLLEEVQGLDPRLRRALEGTGIEVLFPVQTVAWRETAGGA 176
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
D+CI +PTGSGKTLSYALP++Q LS RAV LRALVVLPTRDLA+QV
Sbjct: 177 SPAHDICICAPTGSGKTLSYALPVLQALSGRAVPRLRALVVLPTRDLAVQV--------- 227
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
FG V A + PA+GL+ LA G++S+A E
Sbjct: 228 ---FG---------------------------VLAGLCPALGLAACLAAGKASLAAEAQL 257
Query: 187 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
L VDILVATPGRL+ H+ T GFTL HL +LV+D
Sbjct: 258 LAS--------------------GGVDILVATPGRLIAHLEGTPGFTLRHLRFLVID 294
>gi|189208975|ref|XP_001940820.1| ATP-dependent RNA helicase DBP6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976913|gb|EDU43539.1| ATP-dependent RNA helicase DBP6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 643
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 233/545 (42%), Gaps = 147/545 (26%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-------WQETIGPG 66
W+ P + + P L +DP LQ G VQ A+ +++ +G
Sbjct: 136 WLAQPTTIEASKTVPFSEL-GVDPFFAKTLQKQGFKDALAVQTALVPMLHTGFEQHLG-- 192
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDL---ALQVNSARCK 123
D+C+++ TGSGKTL+Y LPI++ L +R V L A+VV+P+R L ALQV C
Sbjct: 193 ----DICVSAKTGSGKTLAYLLPIIEQLKDRTVPVLSAIVVVPSRQLVNQALQVAEELCS 248
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ VG A+G + A E
Sbjct: 249 ------------------------------------------GTKIKVGTALGNVAFATE 266
Query: 184 ISELIK-RPKLEAGICYDP-------EDVLQELQSAV----DILVATPGRLMDHINATRG 231
+LIK RP+ YDP E L++ Q+ + GRL++HI T G
Sbjct: 267 QKQLIKLRPQ------YDPRRARELNEKALRQYQTGSMERRGLYEDLKGRLVEHIENTTG 320
Query: 232 FTLEHLCYLVVDETDRLLREAYQAW-----------LPTVLQLTRSDNENRFSDASTFLP 280
F L + +LV+DE D+LL + +Q W P L + + R DA++
Sbjct: 321 FLLNAVRWLVIDEADQLLNQNFQGWANVLMDALHGETPVDLMNAQERIQKRERDANSIWS 380
Query: 281 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR 339
A + RR +L K+VLSAT+ +D KL L L P L + ET
Sbjct: 381 IALPA----RR-------------QLTKVVLSATMEKDVTKLGTLRLKRPKLVVVQDETA 423
Query: 340 -----------YKLPERLESYKL-ICESKLKPLYLVALLQSLGEEKCIVFTSS------- 380
++LP LE + + + + KPL+L+ +L + VF S
Sbjct: 424 EVQPLDYEDDVFELPSTLEEFAVHVGDGSNKPLHLLYILLNY------VFPGSQTASVSS 477
Query: 381 -----------VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
+S ++ G + I K R K LK+F G I++L+
Sbjct: 478 SDSSASDSSSDSDSDSGDTSVSQQTGRVLIFTKSTENASR-----KLLKSFSSGAIKILI 532
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+SDA +RG+D+ +++V+NYD P I +Y+HR GRTARAG+ G +TL K E F K
Sbjct: 533 ASDAASRGLDIPDISHVINYDLPTSITSYVHRVGRTARAGKPGEAWTLFTKTEAAWFLKQ 592
Query: 490 LQKAD 494
+ K D
Sbjct: 593 VAKGD 597
>gi|387592705|gb|EIJ87729.1| hypothetical protein NEQG_02276 [Nematocida parisii ERTm3]
gi|387595334|gb|EIJ92959.1| hypothetical protein NEPG_02358 [Nematocida parisii ERTm1]
Length = 427
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 195/436 (44%), Gaps = 105/436 (24%)
Query: 76 SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIAD 135
S TG+GKTL+Y+LPI+ +L N R A+++LPTR+L+ QV++
Sbjct: 50 SNTGTGKTLAYSLPILHSLLNDD-RYFYAMIILPTRELSQQVHA---------------- 92
Query: 136 HSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 195
V + I +GL L +G + + L RP
Sbjct: 93 -----------------------VLSDIGAEIGLRTTLLIGAVDLLVQGKSLAARPH--- 126
Query: 196 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 255
I++ TPGR+ H+ T+G TL YLV+DE DRLL +
Sbjct: 127 ------------------IIIGTPGRIYHHLRNTKGITLSSFKYLVLDECDRLLDNDFDG 168
Query: 256 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 315
+ +L+L P+ + + SATL
Sbjct: 169 DINGILELIS--------------------------------------PKYI-FLFSATL 189
Query: 316 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 375
T+ N +++PL + +PE + + K K +YL ++++SLG KCI
Sbjct: 190 TKRVNAFKNKRMNNPLLYNVQKDE-GIPENISQQYVYLPQKYKEVYLYSIIRSLGSRKCI 248
Query: 376 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 435
VF + + ++ +L E I G + Q VR++T++ FR G+ VL+S+D +
Sbjct: 249 VFVKTCITAEKIERMLRSLDESVCSI---HGNKSQEVRTETIEMFRRGRYSVLISTDVVA 305
Query: 436 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
RGMD+EG+ ++NYD P K YIHR GRT RAG+ G TL+ + +V+ F+KL K D
Sbjct: 306 RGMDMEGIKIIINYDMPDGHKEYIHRIGRTGRAGETGSSITLVTQYDVEEFRKLEVKLDL 365
Query: 496 DSCPIHSIPSSLIESL 511
+SI S LI SL
Sbjct: 366 -KMDEYSISSDLIYSL 380
>gi|344303601|gb|EGW33850.1| hypothetical protein SPAPADRAFT_48957 [Spathaspora passalidarum
NRRL Y-27907]
Length = 621
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 229/502 (45%), Gaps = 115/502 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S + P P L ++ L + ++ F VQ+AV +
Sbjct: 170 LNWLATPIYASPSDTKPFTEFP-LSQFMQRNLTSNNFTNAFSVQIAVLNLMLQDIHDHKL 228
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + + D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L
Sbjct: 229 QPDV-KGDILVNASTGSGKTLAYSIPIIESLHTRVVPRIRAIILVPTKPL---------- 277
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QV+ ++ LSV SI DE
Sbjct: 278 -----------------------------INQVRSTLLVLSKGTNLSVVSLKNDISIKDE 308
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
S+LI ++ DI+V+TPGRL++HI L L +LV+D
Sbjct: 309 ASKLI--------------------ENVPDIIVSTPGRLVEHI-LQSSIDLSALQFLVID 347
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF-LPSAFGSLKTIRRCGVERGFKDKP 302
E DRLL +++Q W Q+ S +N + A + LP
Sbjct: 348 EADRLLNQSFQNWC----QILLSKIDNNINIAEEWKLP---------------------- 381
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---IC 353
+ K++ SATLT D KL+ L P + + + + +P L +KL
Sbjct: 382 ---VQKLIFSATLTTDAGKLSSLQFQKPRLVIVNDEKELVNEIFTVPPTLSEFKLQFGSA 438
Query: 354 ESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNH-FGELRIKIK---EYSGLQ 408
+S +KPL L L S G+ ++FT S ES+ RL LL F +L + S
Sbjct: 439 KSSIKPLILTKFLISQGKLSNVLIFTKSNESSLRLSKLLQLLFSQLNKNVNIAYMNSTNN 498
Query: 409 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 468
R S+R+K LK F I +LV++D + RG+D+ + ++VNYD P + Y+HR GRTARA
Sbjct: 499 RSSIRTKILKEFSNQTINILVATDLIARGIDLVTITDIVNYDLPNSSREYVHRVGRTARA 558
Query: 469 GQLGRCFTL-LHKDEVKRFKKL 489
+G+ ++L K E+K F K+
Sbjct: 559 NNIGQAYSLCFGKGEIKWFDKI 580
>gi|50288559|ref|XP_446709.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661318|sp|Q6FST5.1|DBP6_CANGA RecName: Full=ATP-dependent RNA helicase DBP6
gi|49526017|emb|CAG59636.1| unnamed protein product [Candida glabrata]
Length = 651
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 220/469 (46%), Gaps = 115/469 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
L P+L ++ S FP+Q A+ + + F R D+ +N+ TGSGK
Sbjct: 200 LTPKLLNNIEKYFSKSTFPIQTAMLDQYLKLINFTLKTSKKNFTRRIGDILVNASTGSGK 259
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++PI+QTLS+R V LR L++LPT+ L
Sbjct: 260 TLAYSIPIIQTLSSRTVNKLRVLIILPTKLL----------------------------- 290
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
+ QV + +A L + ++ ++S +E L+K
Sbjct: 291 ----------INQVFQTMSQLAEGTSLVITVSKLENSFNEEHKRLLK------------- 327
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
+ DI + TPGRL+DH+ +L +L +LV+DE DRLL +++Q W+P V+
Sbjct: 328 -------TEPDIFITTPGRLVDHL-TNSSISLRNLKFLVLDEADRLLNQSFQNWIPEVMS 379
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
+SD ++ +P + ++KMV SATLT + KL
Sbjct: 380 KFKSDKFDQ-------MPGS-----------------------IIKMVFSATLTTNTEKL 409
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFT 378
L L++P LF T Y LP L+ Y+L +S KPLYL+ LL+ L K +VF
Sbjct: 410 NDLQLYNPTLFATDSVKLYNLPPTLQEYQLQIPSAKSVYKPLYLLKLLEQLSGGKTLVFV 469
Query: 379 SSVESTHRLCTLLN-----HFGELRIKIKEYSGLQRQSVRSKTLKAFRE----GKIQVLV 429
S ES+ +L LL H L+I + + ++ + + F + + VL+
Sbjct: 470 RSNESSLKLEVLLKSLIKGHMTTLQIVVHSINSNNSKAENRRLVTDFTKESLPNQTNVLI 529
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
++D M+RG+D+E + NV+NYD P + Y+HR GRTARA + G+ + +L
Sbjct: 530 TTDLMSRGIDIENIANVINYDVPISSQQYVHRCGRTARANKDGKAYNML 578
>gi|410078027|ref|XP_003956595.1| hypothetical protein KAFR_0C04690 [Kazachstania africana CBS 2517]
gi|372463179|emb|CCF57460.1| hypothetical protein KAFR_0C04690 [Kazachstania africana CBS 2517]
Length = 629
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 234/517 (45%), Gaps = 128/517 (24%)
Query: 14 WMRSP---VDVSLFEDCPLD-HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGL-- 67
WM S D S+ + P D + L P+L ++ FP+Q + +TI P +
Sbjct: 163 WMNSTKIYYDNSMIK--PYDTYGSLLQPKLLQNIKKYFSQETFPIQ-TILLDTILPLINF 219
Query: 68 --------FER---DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
F R D+ +N+ TGSGKTL+Y++PI+QTLSNR + LR L+++PT+ L Q
Sbjct: 220 SWSSTKKNFTRRVGDILVNASTGSGKTLAYSIPIIQTLSNRKINKLRCLIIVPTKMLIHQ 279
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
V F++L ++ L + +
Sbjct: 280 V---------------------------FETL------------QKLSSGTSLVISTSKL 300
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
++S+ +E S L LQ DIL+ TPGRL+D + + + +L++
Sbjct: 301 ENSLREEHSRL--------------------LQVEPDILIITPGRLVDLL-SMKSISLKN 339
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L +LV+DE DRLL +++Q W +L +D S T LP
Sbjct: 340 LKFLVLDEADRLLNQSFQNWSEELLHSLNNDK----SQVDT-LPG--------------- 379
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKLICES 355
+VKMV SATLT + KL L L++P LFLT Y LP++L+ IC
Sbjct: 380 --------NVVKMVFSATLTTNTEKLNTLRLYNPKLFLTQSVKLYNLPKKLQETN-ICIP 430
Query: 356 KLKPLY--------LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE-----LRIKIK 402
K LY L +Q + K ++F S E++ RL TLL+ E + I
Sbjct: 431 TAKSLYKPLFLLHLLKKKVQESIDNKILIFVKSNEASLRLATLLSVMAEKFNSSTSLLIN 490
Query: 403 EYSGLQRQSVRSKTLKAFREGK---IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
+ +S +K + F + K + +L+++D M+RG+D+ + NV+NYD P + Y+
Sbjct: 491 SINSNNTKSQNNKIVNEFGQNKGSSMHILITTDLMSRGIDINSITNVINYDLPISSQQYV 550
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 496
HR GRTARA G LL ++F Q+ D D
Sbjct: 551 HRVGRTARANMDGNAINLLVGKGERKFWN--QQIDED 585
>gi|444321634|ref|XP_004181473.1| hypothetical protein TBLA_0F04210 [Tetrapisispora blattae CBS 6284]
gi|387514517|emb|CCH61954.1| hypothetical protein TBLA_0F04210 [Tetrapisispora blattae CBS 6284]
Length = 639
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 220/471 (46%), Gaps = 119/471 (25%)
Query: 52 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 98
FP+Q + +T+ P L F R D+ +N+ TGSGKTL Y +PI+Q LS+R
Sbjct: 194 FPIQ-TILLDTVLPILNFSLSITKKHFTRRVGDILVNASTGSGKTLGYCIPIIQALSSRK 252
Query: 99 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
V LR+L++LPT+ L + QV D
Sbjct: 253 VNKLRSLIILPTKLL---------------------------------------INQVFD 273
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
+ +A L + ++ ++S+ +E + +K+ +P DIL+ T
Sbjct: 274 TLSKLAEGTSLIISISKLENSLKEEHQKFLKQ---------EP-----------DILIMT 313
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL+DH+ L++L LV+DE DRLL +++Q W ++
Sbjct: 314 PGRLVDHL-QLNSINLKNLKMLVLDEADRLLNQSFQNWCSELMN---------------- 356
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGE 337
+ +E+ DK ++K V SATLT + KL +L + P LF+
Sbjct: 357 ------------KIKLEKN--DKLPGNIIKFVFSATLTTNTEKLNKLQFYKPKLFIMDTV 402
Query: 338 TRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
Y LP L+ + + +S KPL L+ L +L K +VF S E++ RL +LL
Sbjct: 403 KLYNLPTTLQEFNINIPTAKSVYKPLILLRLFANLKRSKILVFVKSNEASLRLASLLKMM 462
Query: 395 GE--LRIKIKEYSGLQRQSVRS---KTLKAFR---EGKI-QVLVSSDAMTRGMDVEGVNN 445
+ L + ++ S + + R+ + + AF E I ++L+++D ++RG+D+ + +
Sbjct: 463 NDKNLITETQDISSINSNNSRTDNKRLVNAFSSTIENSINKILITTDLISRGIDINDITH 522
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 496
V+NYD P + Y+HR GRTARAG G+ + +L K+F Q+ DND
Sbjct: 523 VINYDLPISSQQYVHRCGRTARAGSEGQAYNMLVGKGEKQF--WTQQIDND 571
>gi|354548454|emb|CCE45190.1| hypothetical protein CPAR2_702020 [Candida parapsilosis]
Length = 610
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 226/498 (45%), Gaps = 111/498 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-------- 63
L W+ +P V+ E P LD ++ + ++G S F VQV+V + I
Sbjct: 155 LDWLTTPQYVTPNEKLPFQEFE-LDKVIQRNISSLGFSEAFAVQVSVLKMMIPEIKANKR 213
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P F D+ +N+ TGSGKTL+Y +PI+Q + NR V +RA+V++PT+ L
Sbjct: 214 QPDAF-GDILVNASTGSGKTLAYCIPIIQAIHNRVVPRVRAIVLVPTKPL---------- 262
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QVK ++ LS+ SI +E
Sbjct: 263 -----------------------------INQVKTTMMQLSQGTNLSIVGLKNDISIKEE 293
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
SE +K+ D++++TPGRL++H+N +L L +LV+D
Sbjct: 294 -SERLKKL-------------------VPDVIISTPGRLVEHLNLN-SISLASLRFLVID 332
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DRLL +++Q W LT E + D + +R +
Sbjct: 333 EADRLLNQSFQNWSSV---LTSKIEEQQKHDIT-------------KRWSL--------- 367
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICE 354
++ K+V SATLT D KLA L+ + P + +T+ + +P L + + + +
Sbjct: 368 -KVQKLVFSATLTTDAGKLAILNFYKPRLIIVNDTQQLVNEMFSVPSLLSEFIISYGVAK 426
Query: 355 SKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNHFGE-LRIKIKE---YSGLQR 409
+ LKPL L L S + ++FT S ES RL LL + L I I S R
Sbjct: 427 NSLKPLILAKFLVSQDKLFNVLIFTKSNESCIRLAKLLQLIMDALSISINVGFINSTNNR 486
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
S+R++ LK F K+ +L+++D + RG+D+ + +VVNYD P + Y+HR GRTARA
Sbjct: 487 TSIRARILKDFSHQKVNILIATDLIARGIDLTTITDVVNYDLPNSSREYVHRVGRTARAE 546
Query: 470 QLGRCFTLLH-KDEVKRF 486
G + + K E K F
Sbjct: 547 NPGNAYNFVFGKGEQKWF 564
>gi|241959124|ref|XP_002422281.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645626|emb|CAX40285.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 605
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 227/500 (45%), Gaps = 111/500 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER- 70
L W+ P S + P + +K +L+ MG + F VQ++V + + ++
Sbjct: 153 LDWLTKPQYASPQDKEPFTNFKLSSFMIK-SLEKMGFTEAFSVQISVLKMMLPEIEAQKL 211
Query: 71 ------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L
Sbjct: 212 KPDRVGDILVNASTGSGKTLAYSIPIIESLHRRVVPRVRAIILVPTKPL----------- 260
Query: 125 CCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 184
+ QVK ++ L + SI DE
Sbjct: 261 ----------------------------INQVKSTLLQLSSGTNLQIVALKNDISINDE- 291
Query: 185 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
+L+ R S DI+V+TPGRL++H+ + +L L YL++DE
Sbjct: 292 KDLLTR-------------------SVPDIIVSTPGRLVEHL-LSDSISLSSLQYLIIDE 331
Query: 245 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 304
DRLL +++Q W +L K + + +K
Sbjct: 332 ADRLLNQSFQNWSNVLLD------------------------KIDTKINIAEVWK----L 363
Query: 305 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICES 355
+ K+V SATLT D KL+ L ++P + +++ + +P L +K+ + ++
Sbjct: 364 SVQKLVFSATLTTDAGKLSSLKFYNPRLVIVNDSKQLVNEIFTVPMTLSEFKIHLGVAKN 423
Query: 356 KLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNH-FGELRIKIKE---YSGLQRQ 410
LKPL L L S + ++FT S ES+ RL LL F +L + + S R
Sbjct: 424 SLKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLTSLFQKLSVNLNVAFINSTNNRT 483
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
S+RSK LK F ++ +LV++D + RG+DV + +V+NYD P + Y+HR GRTARA Q
Sbjct: 484 SIRSKILKKFSNQEVNILVTTDLIARGIDVASITDVINYDLPNSSREYVHRVGRTARANQ 543
Query: 471 LGRCFTL-LHKDEVKRFKKL 489
+G ++ K E F KL
Sbjct: 544 VGYAYSFCFGKGENSWFNKL 563
>gi|50838814|ref|NP_001002869.1| probable ATP-dependent RNA helicase DDX27 [Danio rerio]
gi|49618925|gb|AAT68047.1| DEAD box polypeptide 27 [Danio rerio]
Length = 776
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 225/499 (45%), Gaps = 114/499 (22%)
Query: 20 DVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTG 79
D S +++ H L L A+ MG P+Q A + GL +D+C + TG
Sbjct: 193 DASQYDENLTFHDMNLSRPLLKAISTMGFKQPTPIQKAC----VPVGLLGKDICACAATG 248
Query: 80 SGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
+GKT ++ LP+++ L R + R LV++PTR+L +QV H+
Sbjct: 249 TGKTAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQV------------------HT 290
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
+A QF ++ S LAVG + + EA +
Sbjct: 291 VARQLAQFTTI---------------------STCLAVGGLDLKSQ----------EAAL 319
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 257
P D+L+ATPGRL+DH++ T F L + L++DE DR+L E ++ +
Sbjct: 320 RAGP-----------DVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQM 368
Query: 258 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 317
+ IR C +R M+ SAT+++
Sbjct: 369 KEI----------------------------IRMCAYQRQT----------MLFSATMSE 390
Query: 318 DPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCI 375
+ LA + L P+ + P + + I +K + + ALL ++ +
Sbjct: 391 EVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAIVAALLTRTFQDHVM 450
Query: 376 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 435
+FT + + HR+ LL G +K+ E G Q+ R ++L+ F++ +I +LV++D
Sbjct: 451 LFTQTKKQAHRMHILLGLMG---LKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAA 507
Query: 436 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
RG+D+EGV V+N+ P +K Y+HR GRTARAG++GR +L+ + E K K++++KA
Sbjct: 508 RGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETERKMLKEIVKKA-- 565
Query: 496 DSCPIHS--IPSSLIESLR 512
P+ + IP +I R
Sbjct: 566 -KFPVKARVIPQEVILKFR 583
>gi|448535807|ref|XP_003871022.1| Dbp6 protein [Candida orthopsilosis Co 90-125]
gi|380355378|emb|CCG24896.1| Dbp6 protein [Candida orthopsilosis]
Length = 609
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 226/498 (45%), Gaps = 111/498 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER- 70
L W+ +P V+ E L +D + L++ G + F VQV+V + TI P +
Sbjct: 154 LDWLTTPQYVTPNEKLSFQGL-GVDETVLNNLKSHGFNEAFAVQVSVLK-TIIPEIIANK 211
Query: 71 -------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
D+ +N+ TGSGKTL+Y++PIVQ L +R V +RA+V++PTR L
Sbjct: 212 RRPDAFGDILVNASTGSGKTLAYSIPIVQALHDRVVPRVRAIVLVPTRPL---------- 261
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QVK ++ LSV SI +E
Sbjct: 262 -----------------------------INQVKTTMLQLSQGTNLSVVGLKNDISIKEE 292
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
SE +K+ DI+V+TPGRL++H+N +L L +LV+D
Sbjct: 293 -SEKLKK-------------------MVPDIVVSTPGRLVEHLNIN-SISLSGLRFLVID 331
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DRLL +++Q W LT +E + +R ++
Sbjct: 332 EADRLLNQSFQNWSSV---LTNKIDEQQ-----------------------KRDISERWS 365
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICE 354
++ K+V SATLT D KL+ L+ + P + +T + +P L + + + +
Sbjct: 366 LKVQKLVFSATLTTDAGKLSNLNFYKPRLIIVNDTEQLVNEMFSVPSLLSEFIIHYGVAK 425
Query: 355 SKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLLNHFGE---LRIKIKEYSGLQ-R 409
+ LKPL L L S + ++FT S ES RL LL + + I + + R
Sbjct: 426 NSLKPLILAKFLASQKKLSNVLIFTKSNESCIRLSKLLQLIMDAFSMSINVAFINSTNNR 485
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
SVR++ L+ F KI +L+++D + RG+D+ + +V+NYD P + Y+HR GRTARA
Sbjct: 486 TSVRARVLRDFSTQKINILIATDLIARGIDLTTITDVINYDLPNSSREYVHRVGRTARAK 545
Query: 470 QLGRCFTLLH-KDEVKRF 486
G + + K E K F
Sbjct: 546 NAGNAYNFVFGKGERKWF 563
>gi|308806291|ref|XP_003080457.1| DEAD (ISS) [Ostreococcus tauri]
gi|116058917|emb|CAL54624.1| DEAD (ISS) [Ostreococcus tauri]
Length = 419
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 212/455 (46%), Gaps = 78/455 (17%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LD RL+ AL + ++ LFPVQ +V G FERDLC+++PTGSGKTL+Y LP++ L
Sbjct: 5 LDSRLEKALDELQLTQLFPVQRSVLSRAYA-GRFERDLCVSAPTGSGKTLAYMLPLIHIL 63
Query: 95 SNR-AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
S R + L+VLP+ DLA QV S +C K +CV+
Sbjct: 64 SKRTSTEKTLGLIVLPSSDLATQVCSVAGHFCAK-----------VGVCVR--------- 103
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
V V + L V + + K + + P+
Sbjct: 104 --VTGVRGTLPNCDSLRVSRRAPKRRFIRRMQATASHSKSQRSVPSTPQ----------- 150
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
ILV TPG L+ H A +E + +LV+DE D++L++++Q +L T+ S + R
Sbjct: 151 ILVTTPGGLVAHRAA-----IETIEFLVIDEADKILQQSHQNFLATL----NSGLQRRRE 201
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
S F+ ++ RL ++ SATL + DLH
Sbjct: 202 VDSVFV-------------------GERHSNRLQILLCSATLKKT-------DLHMIRIF 235
Query: 334 TTGETR-YK-----LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
+ R YK LP + + + E+ K L+++L++ K ++ +S L
Sbjct: 236 APDQVRIYKSQVADLPSCISEFVVFSEAGDKFAALLSILKACSSSKMVILCASATRARHL 295
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
L+ G EYS + Q R+++L AF++ + +LV++DA TRG+D+EGV+ VV
Sbjct: 296 YDQLHQIGSF--TCFEYSSMASQQHRAQSLSAFQKCRRGILVATDAATRGLDIEGVSIVV 353
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 482
++D+ + +TY+HRAGRT RAG G C T E
Sbjct: 354 SFDQAEHFQTYLHRAGRTGRAGNRGICVTTCSTGE 388
>gi|207341548|gb|EDZ69573.1| YNR038Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 515
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 81 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 139
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 140 KRQINRLRCIIIVPTKLL---------------------------------------INQ 160
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 161 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 200
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 201 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 255
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 256 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 289
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 290 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 349
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 350 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 409
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 410 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 469
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 470 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 501
>gi|291001239|ref|XP_002683186.1| predicted protein [Naegleria gruberi]
gi|284096815|gb|EFC50442.1| predicted protein [Naegleria gruberi]
Length = 610
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 215/487 (44%), Gaps = 121/487 (24%)
Query: 50 SLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
++ PV +A+ + + PG D+CI SPTGSGKTLSY LPIV+ LS+ LRA+V++P
Sbjct: 165 AVVPVLIAMTKSGV-PG----DICIGSPTGSGKTLSYVLPIVEVLSSLKFTKLRAIVIVP 219
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
L + QV VF + L
Sbjct: 220 NSQL---------------------------------------VKQVTQVFRSFEKYTSL 240
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
V + E S+L+ D L S VDIL+ TP ++HI T
Sbjct: 241 KVKSLNPYNRFESEQSDLV--------------DSLTG-DSKVDILIGTPSLFVEHIKKT 285
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
+ FTLEHL +LV DE D LL + + +++ + A T+ + I
Sbjct: 286 KNFTLEHLKFLVYDEVDTLLSDEHSSFIKVI--------------ADTY----YNCTSVI 327
Query: 290 RRCGVERGFKDKPYP---RLVKMVL-SATLTQDPNKLAQLDLHHPLFLT--------TGE 337
R + + P P +++ SAT+T KL + L+ P F T + E
Sbjct: 328 SRRAKTQIIPNIPLPVAHSFARIICCSATITSHAGKLDIIRLNRPQFFTYLAPAKLRSAE 387
Query: 338 ------------TRYKLPERLESYKLICESKLKPLYLVALL--QSLGEEKCIVFTSSVES 383
+Y +P+ L + + E+ KPLYL+ALL +K +VF + ++
Sbjct: 388 DMSTSLDDPLVGKKYYIPDTLAQFIVKYEAVTKPLYLIALLLDNKCRSKKTLVFCNDSQT 447
Query: 384 THRLCTLL------------NHFG---ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
HRL LL + FG EL K EY + + L FR+G VL
Sbjct: 448 AHRLNLLLETAVSEGAFNSKDAFGIAPELNTKFSEYYN-PKDKKSTTILNNFRKGHFNVL 506
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK- 487
+ +D + RG D+E V+ V+NYD P +KTYIHR GRTARA + G FT L E++ +K
Sbjct: 507 ICTDVIGRGFDIE-VDFVINYDAPLTLKTYIHRIGRTARAEKEGTSFTFLTGPEIETYKS 565
Query: 488 KLLQKAD 494
KL +A+
Sbjct: 566 KLTSRAE 572
>gi|224089124|ref|XP_002308641.1| predicted protein [Populus trichocarpa]
gi|222854617|gb|EEE92164.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 203/451 (45%), Gaps = 109/451 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRA 98
A + +G + +QV E I L +DL + TGSGKT ++ALP +Q L S +
Sbjct: 24 ACERLGWKNPTKIQV----EAIPHALEGKDLIALAQTGSGKTAAFALPTLQALLQASVTS 79
Query: 99 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
V A V+ PTR+LA+Q IAE
Sbjct: 80 VPVFYACVLSPTRELAIQ---------------------IAEQ----------------- 101
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
F A+ +GL + VG + + L KRP I+V T
Sbjct: 102 -FEALGSDIGLRCAVLVGGVDMGLQTIALAKRP---------------------HIVVGT 139
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL+DH++ T+GF+L L YL++DE DRLL E ++ L +L + D + T+
Sbjct: 140 PGRLLDHLSNTKGFSLRTLKYLILDEADRLLNEEFEKSLDEILTVISRDRK-------TY 192
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
L SAT+T+ KL + L +P+ + +
Sbjct: 193 L-------------------------------FSATMTKKVRKLQRACLRNPVKIEVA-S 220
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y + E L L C +K K YLV L +VFT + ++TH L +L + G
Sbjct: 221 KYSVVETLRQQLLFCPAKYKECYLVHALTLKSGASTMVFTRTCDATHFLALVLRNLGLRA 280
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
I I +G QS R L F+ G+ +L+ +D +RG+D+ V+ VVNYD P K Y
Sbjct: 281 IPI---NGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVVNYDIPTNSKDY 337
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
IHR GRTARAG+ G +L++++E+ FK++
Sbjct: 338 IHRVGRTARAGRSGLAISLVNQNEIGWFKQI 368
>gi|432859445|ref|XP_004069111.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Oryzias
latipes]
Length = 771
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 223/498 (44%), Gaps = 112/498 (22%)
Query: 20 DVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S F+D D + P LK A+ +G P+Q A + L RDLC + T
Sbjct: 190 DASQFDDQLSFDDMNLSRPILK-AITALGFKQPTPIQKAC----VPVSLLGRDLCACAAT 244
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ LP+++ L R + R LV++PTR+L +QV H
Sbjct: 245 GTGKTAAFMLPVLERLIYKPRTSQVTRVLVLVPTRELGIQV------------------H 286
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+A QF S+ + LAVG + + EA
Sbjct: 287 SVARQLAQFTSI---------------------TTCLAVGGLDLKSQ----------EAA 315
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
+ P D+L+ATPGRL+DH++ T F L H+ L++DE DR+L E ++
Sbjct: 316 LRAGP-----------DVLIATPGRLIDHLHNTPNFELSHIEILILDEADRMLDEYFEEQ 364
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ +++L C R M+ SAT+T
Sbjct: 365 MKEIIRL----------------------------CSYNRQ----------TMLFSATMT 386
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
++ LA + L P+ + P + + I + + + ALL ++
Sbjct: 387 EEVKDLAAVSLKQPVRIFVNSNTDVAPFLRQEFIRIRPHREGDREAVVAALLTRTFQDHV 446
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HRL LL G +K+ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 447 MLFTQTRKQAHRLHILLGLMG---LKVGELHGELSQNQRLENLRRFKDDQIDILVATDVA 503
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D++GV V+N+ P+ +K Y+HR GRTARAG+ GR +L+ + E + K++++ A
Sbjct: 504 ARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESERRILKEVVKSAK 563
Query: 495 NDSCPIHSIPSSLIESLR 512
N S +P ++ R
Sbjct: 564 N-SVKARVLPPDVVLKFR 580
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 200/432 (46%), Gaps = 102/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT ++ALPI+Q L R L AL++ PTR+LA Q+
Sbjct: 56 IQKEAIPVALQGRDIIGLAETGSGKTAAFALPILQALLENPAR-LFALILTPTRELAFQI 114
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ + VG
Sbjct: 115 S---------------------------------------EQFEALGSTIGIKSAVIVGG 135
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P +++ATPGRL+DH+ T+GFTL++L
Sbjct: 136 IDMMTQAMMLAKKPH---------------------VVIATPGRLIDHLENTKGFTLKNL 174
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++ +N +
Sbjct: 175 RYLVMDEADRILNMDFEEEVDKILKVIPRENRRTY------------------------- 209
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + T+Y+ ++L+ Y L +K
Sbjct: 210 ------------LYSATMTKKVAKLQRASLTDPVRVEVS-TKYQTVDKLQQYYLFIPAKY 256
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K ++LV LLQ L + IVF ++ T +L +L + G I + G Q+ R L
Sbjct: 257 KEVHLVHLLQDLAGQSFIVFCATCNGTQKLALMLRNLGFTAIPL---HGQMSQAKRLGAL 313
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
+ F+ +L+++D RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ T
Sbjct: 314 QKFKAQARNILLATDVAARGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGKAVTF 373
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 374 VSQYDVELYQRI 385
>gi|403215284|emb|CCK69783.1| hypothetical protein KNAG_0D00300 [Kazachstania naganishii CBS
8797]
Length = 637
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 217/459 (47%), Gaps = 124/459 (27%)
Query: 52 FPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLSNRA 98
FP+Q A+ +TI P + F R D+ +N+ TGSGKTLSY +P+VQTLS+R
Sbjct: 210 FPIQTAIL-DTILPTINTTYKITKRNFTRRVGDVLVNAATGSGKTLSYTIPLVQTLSSRT 268
Query: 99 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
V LRAL+++PT+ L + QV D
Sbjct: 269 VNRLRALILVPTKPL---------------------------------------IHQVYD 289
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
+ + V + ++S+ +E +LI S DIL+ T
Sbjct: 290 TLTKLIKGTNIIVSFSKLENSLREEHQKLIN--------------------SEPDILIVT 329
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL+DHIN + +L +L +LV+DE DRLL +++Q W ++Q ++ +N
Sbjct: 330 PGRLVDHINL-KSISLRNLKFLVLDEADRLLNQSFQNWCHELMQQLDTEKQNV------- 381
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYP-RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG 336
P P ++KMV SATLT + KL L L++P LF+T
Sbjct: 382 ----------------------DPMPGNVIKMVFSATLTTNTAKLHDLKLYNPRLFVTDS 419
Query: 337 ETRYKLPERLESYKL---ICESKLKPLYLVALLQ----SLGEE----KCIVFTSSVESTH 385
Y LP L+ Y + +S KPL+L+ LLQ + GEE K +VF S +++
Sbjct: 420 VKLYNLPPTLQEYNIHIPTAKSLYKPLFLLRLLQLKTTTEGEEKQRAKVLVFVKSNQNSL 479
Query: 386 RLCTL---LNHFGELRIKIKEYSGLQRQSVRSKTLKAF-RE--GKIQVLVSSDAMTRGMD 439
RL +L LN G++ + + + + R L F RE QVL+++D M+RG+D
Sbjct: 480 RLASLLQILNKEGDMTVHSINSNNSKVDNKR--LLAEFSRETASSTQVLITTDLMSRGID 537
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+ + +VVNYD P + Y+HR GRTARA G + LL
Sbjct: 538 INNITDVVNYDVPLSSQQYVHRCGRTARANAAGFAYNLL 576
>gi|190408963|gb|EDV12228.1| ATP-dependent RNA helicase DBP6 [Saccharomyces cerevisiae RM11-1a]
Length = 629
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNASKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 254 KRQINRLRCIIIVPTKLL---------------------------------------INQ 274
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 275 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 523
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|259148989|emb|CAY82233.1| Dbp6p [Saccharomyces cerevisiae EC1118]
gi|323346760|gb|EGA81041.1| Dbp6p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763421|gb|EHN04950.1| Dbp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 254 KRQINRLRCIIIVPTKLL---------------------------------------INQ 274
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 275 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 523
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|256273352|gb|EEU08290.1| Dbp6p [Saccharomyces cerevisiae JAY291]
Length = 629
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 213/477 (44%), Gaps = 119/477 (24%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
D+ +N+ TGSGKTL+Y++PIVQTL R + LR ++++PT+ L
Sbjct: 229 DILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLL----------------- 271
Query: 131 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 190
+ QV + L V +A ++S+ DE +L
Sbjct: 272 ----------------------INQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL--- 306
Query: 191 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 250
LE DIL+ TPGRL+DH+N + L++L +L++DE DRLL
Sbjct: 307 SNLEP-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLN 348
Query: 251 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 310
+++Q W P ++ ++D + LP ++KM+
Sbjct: 349 QSFQGWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMI 378
Query: 311 LSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-AL 365
SATLT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++
Sbjct: 379 FSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSI 438
Query: 366 LQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR------------ 409
Q + K ++F S ES+ RL LL E R + LQ
Sbjct: 439 CQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNN 498
Query: 410 -QSVRSKTLKAF----REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
++ K + F I +L+++D M+RG+D+ + V+NYD P + Y+HR GR
Sbjct: 499 SKAENKKIVANFSHHSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGR 558
Query: 465 TARAGQLGRCFTLL-HKDEVKRFKKLLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
TARA +LG + LL + E F L + D D + + +L+ES +Y S
Sbjct: 559 TARANELGSAYNLLVGRGERTFFDDLNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|6324366|ref|NP_014436.1| Dbp6p [Saccharomyces cerevisiae S288c]
gi|1730678|sp|P53734.1|DBP6_YEAST RecName: Full=ATP-dependent RNA helicase DBP6; AltName: Full=DEAD
box protein 6
gi|1302541|emb|CAA96318.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814686|tpg|DAA10580.1| TPA: Dbp6p [Saccharomyces cerevisiae S288c]
gi|392297030|gb|EIW08131.1| Dbp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 629
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 254 KRQINRLRCIIIVPTKLL---------------------------------------INQ 274
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 275 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 523
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|160380625|sp|A6ZSB3.1|DBP6_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP6; AltName: Full=DEAD
box protein 6
gi|151944567|gb|EDN62845.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
Length = 629
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 254 KRQINRLRCIIIVPTKLL---------------------------------------INQ 274
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 275 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILI 523
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|348544540|ref|XP_003459739.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Oreochromis
niloticus]
Length = 736
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 216/479 (45%), Gaps = 111/479 (23%)
Query: 20 DVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S ++D D + P LK A+ +G P+Q A + GL +DLC + T
Sbjct: 158 DASQYDDQLTFDDMNLSRPILK-AITALGFKQPTPIQKAC----VPVGLLGKDLCACAAT 212
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ LP+++ L R + R LV++PTR+L +QV H
Sbjct: 213 GTGKTAAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQV------------------H 254
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+A QF S+ + LAVG + + EA
Sbjct: 255 SVARQLAQFTSI---------------------TTCLAVGGLDLKSQ----------EAA 283
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
+ P DIL+ATPGRL+DH++ T F L H+ L++DE DR+L E ++
Sbjct: 284 LRAGP-----------DILIATPGRLIDHLHNTPSFELTHIEILILDEADRMLDEYFEEQ 332
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ +++L C R M+ SAT+T
Sbjct: 333 MKEIIRL----------------------------CSYNRQ----------TMLFSATMT 354
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
++ LA + L P+ + P + + I + + + ALL ++
Sbjct: 355 EEVKDLAAVSLKQPVRIFVNSNTDVAPFLRQEFVRIRPHREGDREAVVAALLTRTFQDHV 414
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HRL LL G +K+ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 415 MLFTQTRKQAHRLHILLGLMG---LKVGELHGELSQNQRLENLRRFKDEQIDILVATDVA 471
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
RG+D++GV V+N+ P +K Y+HR GRTARAG+ GR +L+ + E K K++++ A
Sbjct: 472 ARGLDIDGVKTVINFTMPGTVKHYVHRVGRTARAGRSGRSVSLVGESERKMLKEVVKSA 530
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 195/438 (44%), Gaps = 102/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +E I L +D+ + TGSGKT ++ALPI+Q L ++ + L L++ PTR
Sbjct: 94 FKRPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLILAPTR 152
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ F A+ + +
Sbjct: 153 ELAYQISQQ---------------------------------------FEALGSLISVRC 173
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 174 AVIVGGMDMVPQAVALAKKPH---------------------IVVATPGRLLDHMENTKG 212
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+++H YLV+DE DRLL + L +LQ D RR
Sbjct: 213 FSVKHFKYLVMDEADRLLDLDFGPILDKILQELNRD----------------------RR 250
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
M+ SAT++ N L + L +P+ ++ E+ Y+ + L +
Sbjct: 251 T----------------MLFSATMSTKLNSLTRAALQNPVRVSISESSYQTVKNLMQRYM 294
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K +YLV LL + CI+FT ++ T R+ +L G I + G QS
Sbjct: 295 FIPHKYKDIYLVYLLDEFAGKTCIIFTRTIHETQRIAYVLRALGRSAIPLH---GQMNQS 351
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+
Sbjct: 352 ARLGALNKFRGGSRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKS 411
Query: 472 GRCFTLLHKDEVKRFKKL 489
G +++ + +++ ++++
Sbjct: 412 GVAISIVTQYDIEIYQRI 429
>gi|349580973|dbj|GAA26132.1| K7_Dbp6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 629
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 213/477 (44%), Gaps = 119/477 (24%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
D+ +N+ TGSGKTL+Y++PIVQTL R + LR ++++PT+ L
Sbjct: 229 DILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLL----------------- 271
Query: 131 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 190
+ QV + L V +A ++S+ DE +L
Sbjct: 272 ----------------------INQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL--- 306
Query: 191 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 250
LE DIL+ TPGRL+DH+N + L++L +L++DE DRLL
Sbjct: 307 SNLEP-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLN 348
Query: 251 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 310
+++Q W P ++ ++D + LP ++KM+
Sbjct: 349 QSFQGWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMI 378
Query: 311 LSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-AL 365
SATLT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++
Sbjct: 379 FSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSI 438
Query: 366 LQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR------------ 409
Q + K ++F S ES+ RL LL E R + LQ
Sbjct: 439 CQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNN 498
Query: 410 -QSVRSKTLKAF----REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
++ K + F I +L+++D M+RG+D+ + V+NYD P + Y+HR GR
Sbjct: 499 SKAENKKIVANFSHPSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGR 558
Query: 465 TARAGQLGRCFTLL-HKDEVKRFKKLLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
TARA +LG + LL + E F L + D D + + +L+ES +Y S
Sbjct: 559 TARANELGSAYNLLVGRGERTFFDDLNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|50310747|ref|XP_455395.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660305|sp|Q6CKZ4.1|DBP6_KLULA RecName: Full=ATP-dependent RNA helicase DBP6
gi|49644531|emb|CAG98103.1| KLLA0F06941p [Kluyveromyces lactis]
Length = 630
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 218/475 (45%), Gaps = 122/475 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
LD RL + + S FP+Q ++ + + LF R D+ +N+ TGSGK
Sbjct: 182 LDARLLKNITSNFSSETFPIQTILFDKVLPLLNSSFKANRKLFTRRVGDILVNASTGSGK 241
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++P+VQ L +R V +RA++++PT+
Sbjct: 242 TLAYSVPLVQILRSRTVNKVRAIILVPTK------------------------------- 270
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
I + QV D + ++ L+V ++ ++S+ +E ++
Sbjct: 271 --------ILIHQVYDCLSKLSQGTSLNVSMSKLENSLKEEHNKF--------------- 307
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
L ++ DIL+ TPGRL+DH+ F L+ L +LV+DE DRLL +++Q W +
Sbjct: 308 -----LYNSPDILIITPGRLVDHLQM-ESFDLKTLKFLVLDEADRLLNQSFQNWNQVLFH 361
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
+D ++ +R G ++KMV SATLT + KL
Sbjct: 362 HLTNDKQD-------------------KRPG-----------NVIKMVFSATLTTNAEKL 391
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEE-----K 373
L LH+P +FLT Y +P++L+ + +S KPL L+ ++ + K
Sbjct: 392 YNLYLHNPKIFLTDSVKLYSIPKKLQELNVNIPTAKSLFKPLLLLRIIHDIKSSASRNAK 451
Query: 374 CIVFTSSVESTHRLCTLLNHFGELRIKIKEY--------SGLQRQSVRSKTLKAF--REG 423
+VF S E++ RL +LL+ I EY S + + S R K ++ F E
Sbjct: 452 ILVFVKSNEASIRLESLLHAMLGSGIIEDEYNMFLSSIHSNISKGSSR-KLIQEFASSEQ 510
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
K VL+S+D M RG+D+ + +V+NYD P + Y+HR GRTARA G LL
Sbjct: 511 KKSVLISTDIMARGIDINEITHVINYDLPISSQQYVHRCGRTARANTEGIAINLL 565
>gi|323303225|gb|EGA57024.1| Dbp6p [Saccharomyces cerevisiae FostersB]
Length = 629
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 254 KRQINRLRCIIIVPTKLL---------------------------------------INQ 274
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 275 VYTTLTKLTQGXSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAFRE----GKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSGSAGITILI 523
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>gi|410931566|ref|XP_003979166.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like, partial
[Takifugu rubripes]
Length = 697
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 223/502 (44%), Gaps = 118/502 (23%)
Query: 22 SLFEDCP-------LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
S FED D + P LK A+ +G P+Q A + GL RDLC
Sbjct: 171 SFFEDASQYNDQLTFDDMNLSRPILK-AITALGFKQPTPIQKAC----VPVGLLGRDLCA 225
Query: 75 NSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+ TG+GKT ++ LP+++ L R + R LV++PTR+L +QV
Sbjct: 226 CAATGTGKTAAFVLPVLERLVYKPRTSQVTRVLVLVPTRELGIQV--------------- 270
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 192
H++ QF S+ + LAVG
Sbjct: 271 ---HAVTRQLAQFTSI---------------------TTCLAVG---------------- 290
Query: 193 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 252
G+ ++V L++ D+L+ATPGRL+DH++ T F L H+ L++DE DR+L E
Sbjct: 291 ---GLDLKSQEVA--LRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDEY 345
Query: 253 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 312
++ + + IR C R M+ S
Sbjct: 346 FEEQMKEI----------------------------IRLCSYNRQ----------TMLFS 367
Query: 313 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLG 370
AT++++ LA + L P+ + P + + I +K + + ALL
Sbjct: 368 ATMSEEVKDLAAVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAVVAALLTRTF 427
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 430
++ + FT + + HRL LL G +K+ E G Q+ R + L+ F++ +I +LV+
Sbjct: 428 QDHVMCFTQTRKQAHRLHILLGLMG---LKVGELHGELSQNQRLENLRRFKDEQIDILVA 484
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+D RG+D++GV V+N+ P+ +K Y+HR GRTARAG+ GR +L+ + E K K+++
Sbjct: 485 TDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESERKILKEVV 544
Query: 491 QKADNDSCPIHSIPSSLIESLR 512
+ A + +P+ +I R
Sbjct: 545 KSAKT-TVKARVLPAEVILKFR 565
>gi|426392064|ref|XP_004062380.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Gorilla
gorilla gorilla]
Length = 575
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 216/482 (44%), Gaps = 114/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LKVA+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 6 PLLKVAITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 61
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 62 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 94
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 95 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 121
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 122 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 167
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 168 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 203
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 204 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 263
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 264 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 320
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 321 NTIKHYVHRVGRTARAGKAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 377
Query: 511 LR 512
R
Sbjct: 378 FR 379
>gi|119618949|gb|EAW98543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sapiens]
Length = 291
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 16/229 (6%)
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ETRYKLPERLE 347
P L K++ SATLTQ+P KL QL LH P +TG +Y P L
Sbjct: 46 PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLT 105
Query: 348 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+ + C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S
Sbjct: 106 HHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSR 163
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+HR GRTAR
Sbjct: 164 YGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTAR 223
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
AG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 224 AGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 272
>gi|448113511|ref|XP_004202369.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
gi|359465358|emb|CCE89063.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
Length = 623
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 226/531 (42%), Gaps = 110/531 (20%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ SP+ P L + L +MG F VQ V + +
Sbjct: 161 LNWLTSPIYADPSFKRPFSDFKSLSAFMIRNLDSMGYEEAFSVQNTVLEILLQDIEENKL 220
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + DL +N+ TGSGKT++Y++PI++ L R V +RA++++PT+ L QV S +
Sbjct: 221 RPDI-RGDLLVNAATGSGKTIAYSIPIIEALHKRVVPRVRAIILVPTKPLITQVKSTMSQ 279
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
LS G ++ S +
Sbjct: 280 ---------------------------------------------LSKGTSLRIVSFKSD 294
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
IS + KL+A ++P D++++TPGRL++H+ + L L +LV+D
Sbjct: 295 ISIQEEARKLKA---HEP-----------DVIISTPGRLVEHL-SNNTLDLSALRFLVID 339
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DRLL +++Q W V+ ++ D S+ F K
Sbjct: 340 EADRLLNQSFQNWCDVVI--------SKIEDNSSRASMIFDQWKL--------------- 376
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICE 354
+ K++ SATLT D K+A L L P + + + +P L YK+ +
Sbjct: 377 -KTQKLIFSATLTTDAGKIAGLQLQKPRLVIVNDKEQMVNEMFSVPPNLLEYKIQVGAAK 435
Query: 355 SKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLL----NHFGELRIKIKEY--SGL 407
S +KPL L LLQ+ +VF S E++ RL LL N Y S
Sbjct: 436 SSMKPLILARYLLQNNKTSNVLVFAKSNEASIRLAKLLQILMNSLTSSHQTSVAYLNSTN 495
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
SVR KTLK F K+ +LV++D + RG+D+ + +VVNYD P + Y+HR GRTAR
Sbjct: 496 NSTSVRQKTLKEFSTQKVGILVATDLIARGIDILSITDVVNYDLPISAREYVHRVGRTAR 555
Query: 468 AGQLGRCFTL-LHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
A G +T K E K + K+ + SI + + L P K+
Sbjct: 556 ANNHGNAYTFCFGKGEGKWYDKVSSSVGRSGKNVDSIALDVNDLLHPEDKT 606
>gi|449017342|dbj|BAM80744.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 592
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 150/506 (29%), Positives = 226/506 (44%), Gaps = 140/506 (27%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTL-SNRAVRC 101
++ I+ LFP Q V L D+ + +PTGSGKTL YAL ++ L S+ ++ C
Sbjct: 73 RDYAITHLFPFQKEVLAYIRSTALTHSGDVLLGAPTGSGKTLIYALAVLLDLYSSASLFC 132
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
+RALVVLPTR+LA QV + IF + + V SLL +P+
Sbjct: 133 VRALVVLPTRELARQV---------EGIFRTLTASAKLSARVAVLSLLRERVPR------ 177
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
S+L+ R +C + TPGR
Sbjct: 178 -----------------------SDLLNR----QAVC-----------------ITTPGR 193
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L++ ++ L L +LV+DE DRL R++YQ WL +LQ
Sbjct: 194 LVEALD-RHELLLADLRWLVIDEADRLFRQSYQNWLERLLQ------------------- 233
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-----TTG 336
R R D P RL K++ SAT T+D LA L LHHP++L T G
Sbjct: 234 ---------RIDCARRVLDPPLRRLRKLLFSATQTRDATHLAALRLHHPVYLLCHASTEG 284
Query: 337 -----ETRYKLPERLESYKLIC-------ESKLKPLY--------LVALLQSLGEE---- 372
+ R L +++ + +C E KL+ L ++A L+ ++
Sbjct: 285 ARQPSKLRRGLMDQVPAGLTLCSLRFLSEEDKLRFLLRLIVCGPDILATLRDPSDQSSRP 344
Query: 373 ---KCIVFTSSVESTHRLCTL---------LNHFGE--------LRIKIKEYSGLQRQSV 412
+ ++F SVE+THRLC L H+ R+ +E S +S
Sbjct: 345 DHNRMLIFVKSVETTHRLCRFVQLASNWLWLRHYPSPVSTRDRGPRLLAEEISKQVSESA 404
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R+ TL+ F+ G Q L+ SD M RGMD+ ++VVN+D PA+ TY+HR GR ARAG+ G
Sbjct: 405 RAATLERFQRGTTQWLICSDVMARGMDIAEASHVVNFDVPAHPTTYLHRVGRVARAGRPG 464
Query: 473 RCFTLLHKDEVKRFK-KLLQKADNDS 497
T L +++V F+ +++ + ND+
Sbjct: 465 TALTFLLRNQVGYFQSEIIARVRNDT 490
>gi|367006945|ref|XP_003688203.1| hypothetical protein TPHA_0M01940 [Tetrapisispora phaffii CBS 4417]
gi|357526510|emb|CCE65769.1| hypothetical protein TPHA_0M01940 [Tetrapisispora phaffii CBS 4417]
Length = 668
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 222/475 (46%), Gaps = 117/475 (24%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP------GLFER-------DLCINS 76
D+ LDP+L +Q + FP+Q + +T+ P G+ ++ D+ +N+
Sbjct: 200 DYKNQLDPKLLKNIQEKFSTETFPIQ-TILLDTVLPSLNFALGITKKNLTRRVGDILVNA 258
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
TGSGKTL+Y++PI+Q L R V LRA++++PT+ L QV
Sbjct: 259 STGSGKTLAYSIPILQALIKRNVNKLRAIIIVPTKLLINQV------------------- 299
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
F++L ++A L + + +SS+ +E +L
Sbjct: 300 --------FNTL------------NSLASGSSLIISTSRLESSLNEEHQKL--------- 330
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L + DI+V TPGRL+DH+ ++++L +LV+DE DRLL +++Q W
Sbjct: 331 -----------LANEPDIVVVTPGRLVDHLQMG-SISVKNLKFLVLDEADRLLNQSFQNW 378
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+L R + S +P ++KMV SATLT
Sbjct: 379 CNELLSKIR-------TQKSDIMPG-----------------------NIIKMVFSATLT 408
Query: 317 QDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEE 372
+ KL L +HP LF+ Y +P++L+ + +S KPL+L+ LL L
Sbjct: 409 TNTEKLHSLQFYHPKLFVVDSVKLYNIPKKLQEFNFAIPTAKSIYKPLFLLRLLDQLSNA 468
Query: 373 KCIVFTSSVESTHRLCTLLNHFGELRI----KIKEYSGLQRQSVRSKTLKAFREGKIQ-- 426
K +VF S +++ RL +LL+ E + I+ + + K + F + +++
Sbjct: 469 KVLVFVKSNQNSLRLTSLLSKLIEQNLGKKHTIESVNSNNSRGTNRKIVNDFSDDRLKKD 528
Query: 427 ---VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
VL+++D M+RG+D+ + +V+NYD P + Y+HR GRTARAG G + LL
Sbjct: 529 VCTVLITTDIMSRGIDINNITDVINYDLPISSQQYVHRVGRTARAGTEGTTYNLL 583
>gi|366987443|ref|XP_003673488.1| hypothetical protein NCAS_0A05470 [Naumovozyma castellii CBS 4309]
gi|342299351|emb|CCC67105.1| hypothetical protein NCAS_0A05470 [Naumovozyma castellii CBS 4309]
Length = 649
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 225/493 (45%), Gaps = 122/493 (24%)
Query: 34 CLDPRLKVALQNMGISSLFPVQ---------VAVWQETIGPGLFER---DLCINSPTGSG 81
L+P+L + + FP+Q V + + I F R D+ +N+ TGSG
Sbjct: 187 SLEPKLLNNITKYFSNDTFPIQTILLDTLLPVLNFSQRITKKNFTRRVGDILVNASTGSG 246
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
KTL+Y++PIVQTLS R+V LRAL+++PT+ L
Sbjct: 247 KTLAYSIPIVQTLSKRSVNKLRALIIVPTKLL---------------------------- 278
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 201
+ QV D + ++ L + ++ +SS+ +E +L
Sbjct: 279 -----------IHQVYDTLSKLSQGTSLIISISKLESSLKEEHQKL-------------- 313
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
Q L+ D+L+ TPGRL+DH+N +L++L LV+DE DRLL +++Q W ++
Sbjct: 314 ----QNLEP--DVLIITPGRLVDHLNMG-SISLKNLKMLVLDEADRLLNQSFQNWCFELM 366
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
++D ++ +P ++KMV SATLT + K
Sbjct: 367 NRLKTDKLDQ-------MPG-----------------------NVIKMVFSATLTTNTQK 396
Query: 322 LAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVF 377
L L+L+ P LF+ Y LP L+ + + +S KPL L+ LL+ + +VF
Sbjct: 397 LHDLNLYSPKLFVMDSVKLYHLPAMLQEFNINIPTAKSLYKPLLLLRLLKEQSTARILVF 456
Query: 378 TSSVESTHRLCTLLN-----HFGEL----RIKIKEYSGLQRQSVRSKTLKAF-----REG 423
S E++ RL TLLN + L R +I + +S K + F E
Sbjct: 457 AKSNEASLRLATLLNILINKNMENLSTTKRYEITSINSNNSKSENKKLVATFAAAATDEN 516
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
++L+++D M+RG+D+ V +V+NYD P + Y+HR GRTARA G + +L
Sbjct: 517 INKILITTDLMSRGVDITNVTDVINYDVPISSQQYVHRCGRTARANTKGNVYNMLVGKGE 576
Query: 484 KRFKKLLQKADND 496
+ F Q DND
Sbjct: 577 RNF--WSQHIDND 587
>gi|365991671|ref|XP_003672664.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
gi|343771440|emb|CCD27421.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
Length = 709
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 222/487 (45%), Gaps = 126/487 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSG 81
L+P+L ++ FP+Q + +TI P L F R D+ +N+ TGSG
Sbjct: 233 LEPKLLQNIEKYFSHETFPIQ-TILLDTILPTLNFSLKTTKKHFTRRVGDILVNASTGSG 291
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
KTL+Y++PI+QTLS R V LRAL+++PT+ L
Sbjct: 292 KTLAYSIPIIQTLSKRKVNKLRALIIVPTKLL---------------------------- 323
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 201
+ QV D + ++ GL + ++ ++S+ +E KL+ +P
Sbjct: 324 -----------IHQVYDTLSKLSQGTGLIITMSKLENSLKEE------HIKLQTN---EP 363
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
DIL+ TPGRL+DH+N F L++L LV+DE DRLL +++Q W ++
Sbjct: 364 -----------DILITTPGRLVDHLNM-NSFNLKNLKMLVLDEADRLLNQSFQNWCNELM 411
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
+ D + +P S+ T + G ++KM+ SATLT + K
Sbjct: 412 KKLTIDKTPIYQ-----IPGDEISMSTDQMPG-----------NIIKMIFSATLTTNTQK 455
Query: 322 LAQLDLHHP-LFLTTGETRYKLPERLESYKL-ICESKLKPLYLVALL--------QSLGE 371
L L L P LF+ Y LP L+ Y + I +K L L Q +
Sbjct: 456 LHDLKLFKPKLFVMDSVKLYHLPSTLQEYIINIPTAKSLFKPLYLLKLLLKQYEDQQMQG 515
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL-----QRQSVRSKTLKA------- 419
+ +VF S ES+ RL TLL +I I + S L Q S+ S KA
Sbjct: 516 SRILVFVKSNESSLRLATLL------KIMINKTSNLNESNYQINSINSNNSKADNRKLVT 569
Query: 420 -----FREGKI---QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
F + + ++L+++D M+RG+D+ + +V+NYD P + Y+HR+GRTARA
Sbjct: 570 EFSKPFEDSSMLHAKILITTDLMSRGIDINNITDVINYDLPLSSQQYVHRSGRTARARSN 629
Query: 472 GRCFTLL 478
G + +L
Sbjct: 630 GNAYNML 636
>gi|448116165|ref|XP_004202989.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
gi|359383857|emb|CCE79773.1| Piso0_001861 [Millerozyma farinosa CBS 7064]
Length = 615
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 228/532 (42%), Gaps = 112/532 (21%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ SP+ P L + L +MG F VQ V + +
Sbjct: 153 LNWLTSPIYADPSFKRPFSDFKSLSAFMIRNLNSMGYEEAFSVQNTVLEILLQDIEENRL 212
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + DL +N+ TGSGKT++Y++PI++ L R V +RA++++PT+ L QV S +
Sbjct: 213 RPDI-RGDLLVNAATGSGKTIAYSIPIIEALHERVVPRVRAIILVPTKPLITQVKSTMSQ 271
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
LS G ++ S+ +
Sbjct: 272 ---------------------------------------------LSKGTSLSIVSLKSD 286
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI-NATRGFTLEHLCYLVV 242
+S + KL+A ++P D++++TPGRL++H+ N+T L L +LV+
Sbjct: 287 LSVQEEARKLKA---HEP-----------DVIISTPGRLVEHLSNST--LDLSALRFLVI 330
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL +++Q W V+ ++ D S+ F K
Sbjct: 331 DEADRLLNQSFQNWCDIVI--------SKIDDTSSRASMIFDHWKL-------------- 368
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---IC 353
+ K++ SATLT D K+A L L P + + + +P L YK+
Sbjct: 369 --KTQKLIFSATLTTDAGKIAGLQLQKPRLVIVNDKEQMVNEMFSVPPNLLEYKIQVGAA 426
Query: 354 ESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLL----NHFGELRIKIKEY--SG 406
+S +KPL L L QS ++F S E++ RL LL N Y S
Sbjct: 427 KSSIKPLILARYLFQSGKTSNVLIFAKSNEASIRLAKLLQILMNSLSSSHQTSVAYLNST 486
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
SVR KTLK F KI +LV++D + RG+D+ + +VVNYD P + Y+HR GRTA
Sbjct: 487 NNSTSVRQKTLKDFSTQKIGILVATDLIARGIDILSITDVVNYDLPISAREYVHRVGRTA 546
Query: 467 RAGQLGRCFTL-LHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
RA G +T K E + + K+ + SI + + L P K+
Sbjct: 547 RANNHGNAYTFCFGKGEGRWYDKVSSSVGRSGKNVDSIALDVNDLLHPEDKT 598
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 207/467 (44%), Gaps = 108/467 (23%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
ED L +D +L A N+G F A+ +E+I L +D+ + TGSGKT
Sbjct: 81 EDKSFAELGVID-QLCDACANLG----FTKPTAIQKESIPIALEGKDIIGLAETGSGKTA 135
Query: 85 SYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
++ALPI+Q L + + + LV+ PTR+LA Q++
Sbjct: 136 AFALPILQALMAAPQHEQHKFGLVLAPTRELAYQISQQ---------------------- 173
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
F A+ + + + VG + + L K P
Sbjct: 174 -----------------FEALGSLINVRCAVLVGGMDMVPQAIALNKNPH---------- 206
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
I+VATPGRL+DH+ T+GF++ L YLV+DE DRLL + L +LQ
Sbjct: 207 -----------IVVATPGRLLDHLENTKGFSMRSLKYLVMDEADRLLDLDFGPILDKILQ 255
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
+ LPS RR M+ SAT++ N L
Sbjct: 256 V---------------LPSK-------RRT----------------MLFSATMSTKLNNL 277
Query: 323 AQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 382
+ L +P+ ++ + Y+ + L + K K +YLV LL + CIVFT ++
Sbjct: 278 TRAALQNPVRVSISSSSYQTVKNLMQRYIFIPHKFKDIYLVYLLNEFAGQTCIVFTRTIN 337
Query: 383 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 442
T R+ LL G I + G QS R L FR G ++LV++D RG+D+
Sbjct: 338 ETQRIAFLLRALGRSAIPLH---GQMNQSARLGALNKFRGGSREILVATDVAARGLDIPS 394
Query: 443 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
V+ V+N+D P KTY+HR GRTARAG+ G +++ + +++ ++++
Sbjct: 395 VDLVLNFDLPPDSKTYVHRVGRTARAGKSGVAISVVTQYDIEIYQRI 441
>gi|449666070|ref|XP_002163050.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Hydra magnipapillata]
Length = 431
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 201/434 (46%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALP++QTL + R L ALV+ PTR+LA Q+
Sbjct: 21 IQREAIPLALEGKDIIGLAETGSGKTGAFALPVLQTLLDNPQR-LYALVITPTRELAFQI 79
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 80 S---------------------------------------EQFEALGSSIGIKCAVIVGG 100
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF+L L
Sbjct: 101 VDLMTQSLALTKKPH---------------------IVIATPGRLVDHLENTKGFSLRSL 139
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YL++DE DR+L ++ + +L++ + ST+L
Sbjct: 140 KYLIMDEADRILNMDFEEEVNKILKVIPKER-------STYL------------------ 174
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L +P+ + T+++ E+L+ + +K
Sbjct: 175 -------------FSATMTKKVAKLQRASLKNPVKVEVS-TKFQTVEKLQQSYIFIPNKF 220
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV++L L I+F + + R+C LL H G + + G Q+ R L
Sbjct: 221 KDCYLVSILNDLAGNSFIIFCGTCNNVQRVCLLLRHLGFHAVPL---HGQMTQAKRLGAL 277
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
++ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 278 NKYKSKSRTILIATDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 337
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 338 VTQYDVELYQRIEQ 351
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 215/490 (43%), Gaps = 117/490 (23%)
Query: 12 LPWMRSPVDVSLFEDCPLD-HLPCLDPRLKVALQNMGISSLF-----------PVQVAVW 59
LP + S DCP + P ++ +++G++ + P ++ +
Sbjct: 86 LPETSGKMAASEEHDCPTETSQPVVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQI- 144
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 119
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q++
Sbjct: 145 -EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQIS- 201
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
+ F A+ ++G+ + VG
Sbjct: 202 --------------------------------------EQFEALGSSIGVQSAVIVGGID 223
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
+ L K+P I++ATPGRL+DH+ T+GF L L Y
Sbjct: 224 SMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGFNLRALKY 262
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LV+DE DR+L ++ + +L++ D + TFL
Sbjct: 263 LVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL-------------------- 295
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 359
SAT+T+ KL + L +P+ ++Y+ E+L+ Y + SK K
Sbjct: 296 -----------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIFIPSKFKD 343
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
YLV +L L ++F S+ +T R LL + G I + G QS R +L
Sbjct: 344 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQSKRLGSLNK 400
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T +
Sbjct: 401 FKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT 460
Query: 480 KDEVKRFKKL 489
+ +V+ F+++
Sbjct: 461 QYDVELFQRI 470
>gi|443922203|gb|ELU41680.1| ATP-dependent RNA helicase drs1 [Rhizoctonia solani AG-1 IA]
Length = 1126
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 212/473 (44%), Gaps = 108/473 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
AL + G +S P+Q A TI L +D+ + TGSGKT ++ +PI++ L R+
Sbjct: 200 ALTSAGFNSPTPIQAA----TIPVALLGKDVVGGAVTGSGKTAAFIIPILERLLYRSRDA 255
Query: 102 -LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 160
R LV++PTR+LA+Q C H++AE F DV
Sbjct: 256 HTRVLVLVPTRELAVQ---------C---------HAVAEKLGTF-----------TDVR 286
Query: 161 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 220
A L VG S+ + + L RP D++VATPG
Sbjct: 287 CA----------LIVGGLSLKAQEATLRTRP---------------------DLVVATPG 315
Query: 221 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 280
RL+DH+ +R F L+ L LV+DE DR+L + + L ++Q
Sbjct: 316 RLIDHLRNSRSFALDALDVLVLDEADRMLSDGFADELKEIVQ------------------ 357
Query: 281 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 340
S T R+ M+ SAT+T D L +L L HP+ L ++
Sbjct: 358 ----SCPTGRQT----------------MLFSATMTDDVETLIRLSLRHPVRLFVDPSKQ 397
Query: 341 KLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
++ + + K +P LVAL Q + I+F S + H+ + FG
Sbjct: 398 TARGLVQEFVRVRAGKEAERPALLVALCQRTARKGVIIFFRSKKLAHQFRVV---FGLCG 454
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+K E G Q R L FR G+ L+++D +RG+D+ G+ V+NYD P I+ Y
Sbjct: 455 LKALELHGNLTQEQRLNALTKFRSGEADYLLATDLASRGLDIRGIETVINYDMPGQIEQY 514
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 511
+HR GRTARAG+ GR TL+ + + K K +++++ D +PS ++ S+
Sbjct: 515 VHRVGRTARAGKKGRSITLVGEADRKMLKAAIKRSEADKIRHRVVPSEVVASV 567
>gi|324510572|gb|ADY44421.1| ATP-dependent RNA helicase [Ascaris suum]
Length = 560
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 216/509 (42%), Gaps = 117/509 (22%)
Query: 14 WMRS----PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPG--- 66
W++S P D+S LD + L P L L+N I FPVQ +V I
Sbjct: 77 WIKSGTNFPADLSNENLAELDAVSGLHPSLMETLKN-NIKKWFPVQHSVLPHLIAESKCA 135
Query: 67 --LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
L RDL I++PTGSGKTL Y LPI+ +LS A + AL+V P ++L Q+ + K+
Sbjct: 136 SILPPRDLAISAPTGSGKTLCYILPILNSLSYTAAPSIHALIVAPVQNLVTQIEAEFKKF 195
Query: 125 CCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 184
A G+ L G + E
Sbjct: 196 ----------------------------------------DAFGIQTALLCGNHDVNAER 215
Query: 185 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH-INATRGFTLEHLCYLVVD 243
+L ++ ATPGRLM+H ++ + HL YL++D
Sbjct: 216 RQL----------------------KTARVVFATPGRLMEHLVDPVSHMDVSHLRYLIID 253
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DR+ + A WL + Q + L + S+ +
Sbjct: 254 EADRMSQTARLEWLDALEQ-------------AAHLTGGWTSVDDLLSVR---------- 290
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYK------------------LPE 344
L K+++SATL++D KL L +P LF + E + LP
Sbjct: 291 -HLQKILVSATLSRDVEKLHTWKLRYPRLFKASAEYSEEVKNAMSIADVDQIEGAALLPS 349
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCI-VFTSSVESTHRLCTLLNHFGELRIKIKE 403
L + +ICE ++KPL L +Q + K I VF ++ ++ RL LL +++E
Sbjct: 350 SLSHHVVICELRMKPLALYVEVQDKPQWKRILVFANNKLASRRLAILLKVLSADVYRVEE 409
Query: 404 YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAG 463
S R K L F++G +VL+SSD ++RG+DV+ V+ V+NYDKP + +IHR
Sbjct: 410 LSSNLFGRRRQKVLNRFKKGSTRVLISSDVLSRGIDVQDVDVVINYDKPISERLFIHRVV 469
Query: 464 RTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
RTAR G+ G +L E K + +L K
Sbjct: 470 RTARCGKPGTAISLTTSGERKDLESMLSK 498
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 201/432 (46%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++A+PI+Q L + R L AL++ PTR+LA Q+
Sbjct: 48 IQREAIPVALQGSDIIGLAETGSGKTGAFAIPILQKLLDSPQR-LYALILTPTRELAFQI 106
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ A+G+ + VG
Sbjct: 107 S---------------------------------------EQFEALGSAIGVKCAVVVGG 127
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 128 IDMMSQSLMLAKKPH---------------------IIIATPGRLIDHLENTKGFNLRAL 166
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L ++ + +L++ + ST+L
Sbjct: 167 KFLVMDEADRILNMDFEQEVDKILKVIPRER-------STYL------------------ 201
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L +P+ + ++Y+ ++L+ Y L +K
Sbjct: 202 -------------YSATMTKKVAKLQRASLQNPVKVEVS-SKYQTVDKLQQYYLFVPAKF 247
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV++L L +VFTS+ +T R +L + G I + G QS R +L
Sbjct: 248 KDVYLVSVLNELAGNSFMVFTSTCANTQRTALMLRNLGLTAIPLH---GQMSQSKRLGSL 304
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 305 NKFKSKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 364
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 365 VSQYDVELYQRI 376
>gi|405953609|gb|EKC21239.1| Putative ATP-dependent RNA helicase DDX27 [Crassostrea gigas]
Length = 740
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 212/477 (44%), Gaps = 114/477 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
L M + P+Q A TI L RDLC + TGSGKT+++ LPI++ L R
Sbjct: 182 GLGQMNFTKPTPIQTA----TIPIALLGRDLCACAVTGSGKTVAFMLPILERLMYRTQEE 237
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LV++PTR+LA+QV H++A Q+
Sbjct: 238 AATRVLVLVPTRELAVQV------------------HTVARQLAQY-------------- 265
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ + L+ G I + + L +P DI++ATP
Sbjct: 266 -------TNIEIVLSAGGLDIKAQEAALRMKP---------------------DIVIATP 297
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL+DH++ + F+L ++ LV+DE DR+L E + + +
Sbjct: 298 GRLIDHLHNSPNFSLRNIEILVLDEADRMLDEYFAEQMNEI------------------- 338
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL-FLTTGET 338
IR+C R M+ SAT+++ LA + L P+ T
Sbjct: 339 ---------IRQCAQTRQ----------TMLFSATMSEAVQDLASVSLKQPVKIFVNQNT 379
Query: 339 RYKLPERLESYKLICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
L R E ++ + ++A L+ + CIVF + + HR+ +L G L
Sbjct: 380 DVALGLRQEFIRIRPNREGDREAIIASLVSRTFRDHCIVFIQTKKQAHRMHIIL---GLL 436
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ + E G Q+ R +TLK F++ + VL+++D RG+D+EGV V+N+ P IK
Sbjct: 437 GVNVGELHGNLSQAQRLETLKRFKQADVDVLLATDLAARGLDIEGVKTVINFTMPNTIKH 496
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
Y+HR GRTARAG+ GR TL+ + E K K++++KA P+ + +P +I R
Sbjct: 497 YVHRVGRTARAGKKGRSVTLVGEQERKLLKEVVKKA---RTPLKTRIVPQEVISKYR 550
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 221/488 (45%), Gaps = 131/488 (26%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK AL +G S+ P+QVA TI L +D+ N+ TGSGKT ++ +P+++ L
Sbjct: 195 PLLK-ALTALGFSTPTPIQVA----TIPVALLGKDVVGNAVTGSGKTAAFMIPVLERLMY 249
Query: 97 R-------AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
R AVRC+ V++PTR+L +Q CV
Sbjct: 250 RERGKNKAAVRCV---VLVPTRELGVQ-------------------------CV------ 275
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
DV ++ + + + L VG S+ + +EL RP
Sbjct: 276 --------DVAKKLSAFMDVRISLIVGGLSLKSQEAELRTRP------------------ 309
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
DI++ATPGRL+DH+ + F LE L L++DE DR+L + + L ++Q
Sbjct: 310 ---DIVIATPGRLIDHLRNSPSFGLETLDVLILDEADRMLSDGFADELKEIIQA------ 360
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
C P R M+ SAT+T D + L ++ L+
Sbjct: 361 ----------------------C---------PTSRQT-MLFSATMTDDVDALVRMSLNR 388
Query: 330 PLFLTTGETRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSV 381
P+ L + P+R + LI E + LVAL + ++ IVF S
Sbjct: 389 PVKL------FVDPKRSTARGLIQEFVRVRAGKEAERAALLVALCKRTFKQGVIVFFRSK 442
Query: 382 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
+ H++ + FG L +K +E G Q R + L+ FR+G + L+++D +RG+D++
Sbjct: 443 KLAHQMRVV---FGILGMKAEELHGDLTQEQRLRALQLFRDGAVDFLMATDLASRGLDIK 499
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPI 500
G+ VVNYD P + Y+HR GRTARAG+ GR TL+ + + K K ++ A D D
Sbjct: 500 GIEAVVNYDMPGQLAQYLHRVGRTARAGKKGRSVTLVGEADRKILKAAIKHASDVDKVRH 559
Query: 501 HSIPSSLI 508
+IPS +
Sbjct: 560 RTIPSDQV 567
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 195/442 (44%), Gaps = 102/442 (23%)
Query: 48 ISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
IS + A+ +E+I L +D+ + TGSGKT ++ALPI+Q L + LV+
Sbjct: 104 ISLGYKTPTAIQRESIPIALQGKDVIGLAETGSGKTAAFALPILQALLEKQDHYF-GLVL 162
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
PTR+LA Q++ F A+ +
Sbjct: 163 APTRELAYQISQQ---------------------------------------FEALGSLI 183
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
+ + VG + + L K+P I+VATPGRLMDH+
Sbjct: 184 NVKCAVIVGGMDMTPQQIALAKKPH---------------------IIVATPGRLMDHLE 222
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T+GF+L L YLV+DE DRLL + L +LQ+ LP
Sbjct: 223 NTKGFSLRKLKYLVMDEADRLLDLDFGPILDKILQV---------------LPRE----- 262
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 347
RR M+ SAT++ + L + L P+ ++ + Y+ + L+
Sbjct: 263 --RRT----------------MLFSATMSTKLDNLTRAALQSPVRVSISSSSYQTVKNLK 304
Query: 348 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+ K K +YLV L+ + CI+FT ++ T R+ LL G I + G
Sbjct: 305 QSYIFIPHKFKDIYLVYLVNEFAGQTCIIFTRTINETARIAFLLRALGRSAIPL---HGQ 361
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
QS R L FR G +LV++D RG+D+ V+ V+NYD P KTY+HR GRTAR
Sbjct: 362 LNQSARLGALNKFRGGSRDILVATDVAARGLDIPSVDLVLNYDLPPDSKTYVHRVGRTAR 421
Query: 468 AGQLGRCFTLLHKDEVKRFKKL 489
AG+ G +++ + +V+ ++++
Sbjct: 422 AGKAGVAISIVTQYDVEVYQRI 443
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 193/438 (44%), Gaps = 102/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +E I L +D+ + TGSGKT ++ALPI+Q L ++ + + LV+ PTR
Sbjct: 56 FTKPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPILQELLDKP-QPMFGLVLAPTR 114
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ F A+ + +
Sbjct: 115 ELAYQISQQ---------------------------------------FEALGSLISVRC 135
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 136 AVIVGGMDMVPQAIALAKKPH---------------------IVVATPGRLLDHLENTKG 174
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L YLV+DE DRLL + L + Q+ LP RR
Sbjct: 175 FSLRQLKYLVMDEADRLLDLDFGPILDKIFQV---------------LPRE-------RR 212
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
M+ SAT++ N L + L P+ ++ + Y+ + L +
Sbjct: 213 T----------------MLFSATMSTKLNNLTRAALQQPVKVSISSSSYQTVKNLMQRYI 256
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K +YLV LL + CIVFT ++ T R+ LL G I + G QS
Sbjct: 257 FIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETARIAFLLRALGRSAIPLH---GQMNQS 313
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+
Sbjct: 314 ARLGALNKFRGGHRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKS 373
Query: 472 GRCFTLLHKDEVKRFKKL 489
G +++ + +++ ++++
Sbjct: 374 GVAISVVTQYDIEIYQRI 391
>gi|312376445|gb|EFR23526.1| hypothetical protein AND_12724 [Anopheles darlingi]
Length = 749
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 166/342 (48%), Gaps = 44/342 (12%)
Query: 206 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
Q +Q A DI+V T GRL++H+++T GFTL HL +LV+DE DR++ + WL + + +
Sbjct: 280 QFIQKA-DIVVTTAGRLVEHLHSTAGFTLCHLRFLVIDEADRVMNQIQNDWLYHLNKHVK 338
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
++ L G L D+P + K++ SATL++DP KL
Sbjct: 339 QQSDE------YLLGRTAGQLSQTE-------LFDRPQ-QPHKLLFSATLSRDPEKLQTF 384
Query: 326 DLHHPLFLT----------------TGETR-------------YKLPERLESYKLICESK 356
L HP T G T+ Y P L + +
Sbjct: 385 KLFHPKLFTAVRDPTERAIALSKSGAGSTKQNALLRRGKFIGQYTTPSELRELVCYTQFR 444
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
+KPL L AL++ G K +VFT+ ++ +HRL +L + I+E+S + R
Sbjct: 445 IKPLTLFALIRQAGYRKFLVFTNGIDGSHRLSFVLQRLFGTEMVIEEWSSSLTPATRRSV 504
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F GK+ ++ +DA+ RG D++ + VV+YD P +I TYIHR GRTARAG G T
Sbjct: 505 LHRFSLGKVNGIICTDALARGFDIDDIEIVVSYDMPRHISTYIHRIGRTARAGNRGTSIT 564
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
LL +E K+F +L++A + I SS+ E Y +
Sbjct: 565 LLIDEEKKKFNSMLKEAGKEELEAVEIQSSVEEEYAGKYSAA 606
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
Query: 13 PWMRSPV--DVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAV--W--QETIGP 65
PW+ P+ D L P + LD LK L+ MG LFPVQ V W + P
Sbjct: 130 PWLSHPIIIDSDLSAQGPSIKKQAYLDGVLKDNLKAMGYKRLFPVQEKVIPWILEAHAKP 189
Query: 66 GLF-ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
F RD+CI+SPTGSGKTL++A+PIVQ L R +RALV+LP ++LA QV K
Sbjct: 190 APFWPRDVCISSPTGSGKTLAFAVPIVQLLLKRVAPAVRALVILPVQELAEQVYGVFEKL 249
Query: 125 C 125
C
Sbjct: 250 C 250
>gi|186703632|emb|CAQ43244.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
Length = 628
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 211/474 (44%), Gaps = 126/474 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI----------GPGLFER--DLCINSPTGSGK 82
L PRL +Q FP+Q + T+ L R D+ +N+ TGSGK
Sbjct: 188 LQPRLLANIQQFFSKDTFPIQTVLLDNTLPLLNFTLGVSKKNLTRRIGDILVNASTGSGK 247
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++PI++ LS R V LRALV++PT+ L
Sbjct: 248 TLAYSIPIIEALSKRTVNKLRALVIVPTKLL----------------------------- 278
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
+ QV D + +A GL + ++ ++S+ +E + I Y+P
Sbjct: 279 ----------IGQVFDTMSKLAQGTGLIISISKLENSLKEEHQKFIN---------YEP- 318
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
DIL+ TPGRL+DH+ +++L LV+DE D LL +++Q W ++
Sbjct: 319 ----------DILIVTPGRLVDHLQIG-SINMKNLMMLVLDEADHLLNQSFQNWSAELMN 367
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
RS ++ +P ++KMV SATLT + KL
Sbjct: 368 NIRSQKLDQ-------MPG-----------------------NVIKMVFSATLTTNTEKL 397
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFT 378
L L++P LF+ Y LP++L+ Y + +S KPL+L+ LL L K +VF
Sbjct: 398 HGLHLYNPKLFVKDSVKLYNLPDKLQEYNINVPTAKSIYKPLFLLHLLDKLHNAKILVFV 457
Query: 379 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ--SVRSKTLKAFREGKI----------- 425
S E++ RL LL I I+ G SV S KA + +
Sbjct: 458 KSNEASLRLAPLLT------IMIERKMGTPHNVLSVNSNNSKAENKRLVHQFATSNTSES 511
Query: 426 -QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
QVL+++D M+RG+D+ + +V+NYD P + Y+HR GRTARA G LL
Sbjct: 512 NQVLITTDLMSRGIDINDITDVINYDPPISSQQYVHRCGRTARAQGHGNAHNLL 565
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 194/444 (43%), Gaps = 107/444 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A+Q M + P+Q E I L +D+ + TGSGKT ++A+PI+Q L
Sbjct: 75 LVPDLLEAIQQMKFTKPTPIQ----SEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQAL 130
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A LV+ PTR+LA Q+
Sbjct: 131 WH-AQTPYFGLVLAPTRELAFQI------------------------------------- 152
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
KD F A+ +GL VG + D+ +L+++P I
Sbjct: 153 --KDTFDALGTTMGLRSVCIVGGMDMMDQARDLMRKPH---------------------I 189
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGR+MDH+ T+GF+L++L YLV+DE DRLL + L +L++
Sbjct: 190 VVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKV----------- 238
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+P P+ + SAT+T KL + LH+P+ +
Sbjct: 239 ----IP-----------------------PKRTTYLFSATMTNKIEKLQRASLHNPVRVA 271
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
T+Y+ + L ++ K L+ LL + IVFT +V R L
Sbjct: 272 VS-TKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARIL 330
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G Q+ R +L F+ GK +LV++D RG+D+ V+ V+NYD P
Sbjct: 331 GFNAVPL---HGQLSQAQRLGSLNKFKSGKANILVATDVAARGLDIPSVDVVINYDIPTD 387
Query: 455 IKTYIHRAGRTARAGQLGRCFTLL 478
K YIHR GRTARAG+ G+ +L+
Sbjct: 388 SKAYIHRVGRTARAGRSGKSISLI 411
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 195/443 (44%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ +
Sbjct: 73 ACEALGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QS 127
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L L++ PTR+LA Q++ A F
Sbjct: 128 LFGLILAPTRELACQISEA---------------------------------------FE 148
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 149 ALGSLISVRCAVIVGGMDMVSQAISLGKKPH---------------------IIVATPGR 187
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 188 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 232
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 233 E-------RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + IVFT +V T RL LL G I +
Sbjct: 270 TVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPL 329
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 330 H---GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHR 386
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G F+++ + +++
Sbjct: 387 VGRTARAGKSGHAFSIVTQYDIE 409
>gi|254580363|ref|XP_002496167.1| ZYRO0C12012p [Zygosaccharomyces rouxii]
gi|186703847|emb|CAQ43534.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
gi|238939058|emb|CAR27234.1| ZYRO0C12012p [Zygosaccharomyces rouxii]
Length = 624
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 211/474 (44%), Gaps = 126/474 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI----------GPGLFER--DLCINSPTGSGK 82
L PRL +Q FP+Q + T+ L R D+ +N+ TGSGK
Sbjct: 188 LQPRLLANIQQFFSKDTFPIQTVLLDNTLPLLNFTLGVSKKNLTRRIGDILVNASTGSGK 247
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++PI++ LS R V LRALV++PT+ L
Sbjct: 248 TLAYSIPIIEALSKRTVNKLRALVIVPTKLL----------------------------- 278
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
+ QV D + +A GL + ++ ++S+ +E + I Y+P
Sbjct: 279 ----------IGQVFDTMSKLAQGTGLIISISKLENSLKEEHQKFIN---------YEP- 318
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
DIL+ TPGRL+DH+ +++L LV+DE D LL +++Q W ++
Sbjct: 319 ----------DILIVTPGRLVDHLQIG-SINMKNLMMLVLDEADHLLNQSFQNWSAELMN 367
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
RS ++ +P ++KMV SATLT + KL
Sbjct: 368 NIRSHKLDQ-------MPG-----------------------NVIKMVFSATLTTNTEKL 397
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFT 378
L L++P LF+ Y LP++L+ Y + +S KPL+L+ LL L K +VF
Sbjct: 398 HGLHLYNPKLFVRDSVKLYNLPDKLQEYNINVPTAKSIYKPLFLLHLLDKLHNAKILVFV 457
Query: 379 SSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ--SVRSKTLKAFREGKI----------- 425
S E++ RL LL I I+ G SV S KA + +
Sbjct: 458 KSNEASLRLAPLLT------IMIERKMGTPHNVLSVNSNNSKAENKRLVHQFATSNTSES 511
Query: 426 -QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
QVL+++D M+RG+D+ + +V+NYD P + Y+HR GRTARA G LL
Sbjct: 512 NQVLITTDLMSRGIDINDITDVINYDPPISSQQYVHRCGRTARAQGHGNAHNLL 565
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 195/443 (44%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ +
Sbjct: 73 ACEALGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QS 127
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L L++ PTR+LA Q++ A F
Sbjct: 128 LFGLILAPTRELACQISEA---------------------------------------FE 148
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 149 ALGSLISVRCAVIVGGMDMVSQAISLGKKPH---------------------IIVATPGR 187
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 188 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 232
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 233 E-------RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + IVFT +V T RL LL G I +
Sbjct: 270 TVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRTLGFGSIPL 329
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 330 H---GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHR 386
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G F+++ + +++
Sbjct: 387 VGRTARAGKSGHAFSIVTQYDIE 409
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 194/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ +
Sbjct: 73 ACEALGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QS 127
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L L++ PTR+LA Q++ A F
Sbjct: 128 LFGLILAPTRELACQISEA---------------------------------------FE 148
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 149 ALGSLISVRCAVIVGGMDMVSQAISLGKKPH---------------------IIVATPGR 187
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 188 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 232
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 233 E-------RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + IVFT +V T RL LL G I +
Sbjct: 270 TVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPL 329
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 330 H---GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHR 386
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G F+++ + +++
Sbjct: 387 VGRTARAGKSGHAFSIVTQYDIE 409
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ F A+ + +
Sbjct: 128 LAYQISQQ---------------------------------------FEALGSLISVRCA 148
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 149 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 187
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L L YLV+DE DRLL + L +L++ LP RR
Sbjct: 188 SLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 225
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
+ SAT++ L + L +PL ++ +Y+ L LI
Sbjct: 226 ----------------YLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLI 269
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K +YL+ LL + IVFT +V T RL LL G I + G QS
Sbjct: 270 IPHKHKDIYLIYLLNEFPGQSVIVFTRTVNETQRLANLLRALGFGAIPLH---GQLSQSA 326
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 327 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 386
Query: 473 RCFTLLHKDEVKRFKKL 489
R F+L+ + +V+ ++++
Sbjct: 387 RAFSLVTQYDVEIWQRI 403
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 199/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPVALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ +G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSTIGVKSA 119
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDMMSQSLALAKKP---------------------HVVIATPGRLIDHLENTKGF 158
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L P+ ++Y+ E+L+ + +
Sbjct: 199 ------------------FSATMTKKVQKLQRAALKDPVKCAVS-SKYQTVEKLQQFYVF 239
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R+ LL + G I + G Q+
Sbjct: 240 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPL---HGQMSQNK 296
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGSLNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 357 KAITFVSQYDVELFQRI 373
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E+I L RD+ + TGSGKT ++ALPI+Q L R ALV+ PTR+
Sbjct: 39 PTKIQV--ESIPLALQGRDIIGLAETGSGKTGAFALPILQALLETPQRFF-ALVLTPTRE 95
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 96 LAFQIS---------------------------------------EQFEALGSSIGVQTA 116
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 117 VIVGGIDMMAQSLALAKKP---------------------HVIIATPGRLIDHLENTKGF 155
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 156 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 195
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L P+ ++Y+ E+L+ Y +
Sbjct: 196 ------------------FSATMTKKVQKLQRAALKDPVKCAVS-SKYQTVEKLQQYYVF 236
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 237 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMNQNK 293
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ VL+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 294 RLGSLNKFKAKARSVLLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 353
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 354 KSITFVTQYDVELFQRI 370
>gi|291230627|ref|XP_002735268.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47-like
[Saccoglossus kowalevskii]
Length = 446
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 199/435 (45%), Gaps = 105/435 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R L AL++ PTR+LA Q+
Sbjct: 49 IQRESIPLALEGKDVIGLAETGSGKTGAFALPILQDLLEHPQR-LFALILTPTRELAFQI 107
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ A+G+ + VG
Sbjct: 108 S---------------------------------------EQFEALGSAIGIKCAVVVGG 128
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P ++VATPGRL+DH+ T+GF L +
Sbjct: 129 IDMMSQALQLAKKPH---------------------VVVATPGRLVDHLENTKGFNLRSV 167
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L
Sbjct: 168 KYLVMDEADRILNMDFEIELDKIL------------------------------------ 191
Query: 298 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
K PR + L SAT+T+ KL + L +P+ + T+Y+ E+L Y L SK
Sbjct: 192 ---KVIPRERRTYLYSATMTKKVAKLQRASLKNPVKVEVN-TKYQTVEKLLQYYLFIPSK 247
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K +YLV +L L +VF S+ +T R+ +L + G + + G Q+ R
Sbjct: 248 YKDVYLVYILNELAGNSFMVFCSTCNNTQRVALMLRNLGLTAVPL---HGQMSQNKRLGM 304
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 305 LNKFKGKDRSILIATDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGKSGKAIT 364
Query: 477 LLHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 365 FVTQYDVELYQRIEQ 379
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 198/433 (45%), Gaps = 105/433 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 58 IQKEAIPVALQGRDVIGLAETGSGKTASFALPILQALLENPQR-LFALVLTPTRELAFQI 116
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 117 S---------------------------------------EQFEALGASIGVKSAVIVGG 137
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P +++ATPGRL+DH+ T+GF+L+ L
Sbjct: 138 IDMMTQALLLAKKP---------------------HVIIATPGRLVDHLENTKGFSLKSL 176
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++
Sbjct: 177 KYLVMDEADRILNMDFEEEVDKILRVI--------------------------------- 203
Query: 298 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
PR + L SAT+T+ KL + L P+ + ++Y+ E+L Y L +K
Sbjct: 204 ------PRERRTYLYSATMTKKVQKLQRASLRDPVKVEVS-SKYQTVEKLMQYYLFIPAK 256
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K +YLV LL L +VF S+ +T R LL + G I + G Q+ R +
Sbjct: 257 FKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPL---HGQMGQAKRLGS 313
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T
Sbjct: 314 LTKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAIT 373
Query: 477 LLHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 374 FVTQYDVELYQRI 386
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 102
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 103 LAFQIS---------------------------------------EQFEALGSSIGVQSA 123
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 124 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 162
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 163 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 202
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 203 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 243
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L I+F S+ +T R LL + G I + G QS
Sbjct: 244 IPSKFKDTYLVYILNELAGNSFIIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 300
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 301 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 360
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 361 KAITFVTQYDVELFQRI 377
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 194/442 (43%), Gaps = 107/442 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L + M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L +
Sbjct: 98 PELLETINEMKFTKPTPIQA----EAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWD 153
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
A LV+ PTR+LA Q+
Sbjct: 154 -AQTPYFGLVLAPTRELAYQI--------------------------------------- 173
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F A+ ++GL VG + D+ +L++RP ILV
Sbjct: 174 KETFDALGSSMGLRTVCIVGGMDMMDQARDLMRRPH---------------------ILV 212
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGR+MDH+ T+GF+L++L YLV+DE DRLL + L +L++ + +
Sbjct: 213 ATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPTQR-------T 265
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
T+L SAT+T KL + LH+P+ +
Sbjct: 266 TYL-------------------------------FSATMTSKVEKLQRASLHNPVKVAVS 294
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
T+Y+ + L ++ K YL+ LL + IVFT + + R L G
Sbjct: 295 -TKYQTADNLVQSMMLVSDGYKNTYLIHLLNEFVGKSIIVFTRTCAHSQRTSLLARILGF 353
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+ + G QS R +L F+ GK +LV++D RG+D+ V+ V+NYD P K
Sbjct: 354 SAVPL---HGQLSQSQRLGSLNKFKSGKSNILVATDVAARGLDIPSVDVVINYDIPTDSK 410
Query: 457 TYIHRAGRTARAGQLGRCFTLL 478
YIHR GRTARAG+ G+ +L+
Sbjct: 411 AYIHRVGRTARAGKSGKSISLV 432
>gi|45200872|ref|NP_986442.1| AGL225Cp [Ashbya gossypii ATCC 10895]
gi|74692158|sp|Q751D1.1|DBP6_ASHGO RecName: Full=ATP-dependent RNA helicase DBP6
gi|44985570|gb|AAS54266.1| AGL225Cp [Ashbya gossypii ATCC 10895]
gi|374109687|gb|AEY98592.1| FAGL225Cp [Ashbya gossypii FDAG1]
Length = 607
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 208/452 (46%), Gaps = 115/452 (25%)
Query: 52 FPVQVAVWQE---------TIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 99
FP+Q A+ ++ + R D+ +N+ TGSGKTL+YA+ ++ LS R V
Sbjct: 185 FPIQTALLDSVLPLMSQAYSVSKRYYTRKVGDILVNASTGSGKTLAYAMLLIHILSRRTV 244
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
LRA++++PT+ L + QV D
Sbjct: 245 NKLRAVILVPTKLL---------------------------------------VHQVYDT 265
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
A+A + V ++ +S+ +E ++L + +P D+L+ TP
Sbjct: 266 VQALAKGSSVVVAVSKMDTSLKEESAKLKAQ---------EP-----------DVLIITP 305
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL+DH+N + F+L++L +LV+DE DRLL +++Q W
Sbjct: 306 GRLVDHLN-MQTFSLKNLKFLVLDEADRLLNQSFQNWC---------------------- 342
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
++ + R ER FK ++KM+ SATLT + +L L LH+P G
Sbjct: 343 ------IELMTRLNAERPFKGPG--NVIKMIFSATLTTNTERLHDLQLHNPKLFLMGSQL 394
Query: 340 YKLPERLESYKL---ICESKLKPLYLVALLQSLGEE--KCIVFTSSVESTHRLCTLL--- 391
Y +P +L+ Y L +S KPL L+ LL L E + +VF S E++ RL LL
Sbjct: 395 YHMPAQLQEYNLPIPTSKSYAKPLILLRLLPLLSTESLRILVFVKSNEASIRLAALLTAM 454
Query: 392 --NHFGELRIKIKEYSGLQRQSVRSKTLKAFR---EGKIQVLVSSDAMTRGMDVEGVNNV 446
N + + + ++ K ++AF G +LVS+D M+RG+D+ G+++V
Sbjct: 455 VGNGLSAVSTTVGSINNNNSKATNRKLIEAFAAGASGHCSILVSTDLMSRGLDISGISHV 514
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+NYD P + Y+HR GRTARA G LL
Sbjct: 515 INYDLPISSQQYVHRCGRTARANTSGTAVNLL 546
>gi|281349896|gb|EFB25480.1| hypothetical protein PANDA_006406 [Ailuropoda melanoleuca]
Length = 383
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 18 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 74
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 75 LAFQIS---------------------------------------EQFEALGSSIGVQSA 95
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 96 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 134
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 135 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 174
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 175 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 215
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 216 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQSK 272
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 273 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 332
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 333 KAITFVTQYDVELFQRI 349
>gi|186703621|emb|CAQ43234.1| ATP-dependent RNA helicase DBP6 [Zygosaccharomyces rouxii]
Length = 609
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 216/482 (44%), Gaps = 114/482 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIG----------PGLFER--DLCINSPTGSGK 82
L PRL +Q FP+Q + T+ L R D+ +N+ TGSGK
Sbjct: 173 LQPRLLANIQQYFSKDTFPIQTVLLDNTLSLLNFTLGVTKKNLTRRVGDILVNASTGSGK 232
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++PI++ LS R V LR LV++PT+ L
Sbjct: 233 TLAYSIPIIEALSKRTVNKLRVLVIVPTKLL----------------------------- 263
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
+ QV D + +A GL + ++ ++S+ +E + + Y+P
Sbjct: 264 ----------IGQVFDTMSKLAQGTGLIISISKLENSLKEEHQKFMN---------YEP- 303
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
DIL+ TPGRL+DH+ T+++L LV+DE D LL +++Q W
Sbjct: 304 ----------DILIVTPGRLVDHLQIG-SITMKNLMMLVLDEADHLLNQSFQNW------ 346
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
ST L + S K + G ++KMV SATLT + KL
Sbjct: 347 -------------STELMNNIKSHKLDQMPG-----------NVIKMVFSATLTTNTEKL 382
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFT 378
L L++P LF+ Y LP++L+ Y + +S KPL+L+ LL L K +VF
Sbjct: 383 HGLHLYNPKLFVRDSVKLYNLPDKLQEYNVNVPTAKSLYKPLFLLHLLNRLQNAKALVFV 442
Query: 379 SSVESTHRLCTLLNHFGELRI----KIKEYSGLQRQSVRSKTLKAFREGKI----QVLVS 430
S E++ RL LL E R+ + + +S + + F Q+L++
Sbjct: 443 KSNEASLRLAPLLAIMIEKRMGASHNVLSVNSNNTKSENKRLVHQFATSDTKESNQILIT 502
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+D M+RG+D+ + +V+NYD P + Y+HR GRTARA G LL ++F +
Sbjct: 503 TDLMSRGIDINDITDVINYDPPISSQQYVHRCGRTARALGRGNAHNLLVGKGERKFWTQI 562
Query: 491 QK 492
+K
Sbjct: 563 EK 564
>gi|328771154|gb|EGF81194.1| hypothetical protein BATDEDRAFT_87448 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 204/462 (44%), Gaps = 110/462 (23%)
Query: 31 HLPCLD---PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYA 87
H+ LD P L A +G +Q A +I L RD+ + TGSGKT ++A
Sbjct: 11 HVMILDGIIPELIEACTTLGFKKPSDIQCA----SIPVALTGRDIIGLAQTGSGKTAAFA 66
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
LPI+QTL + L A V+ PTR+LA Q++
Sbjct: 67 LPILQTLFANP-QHLYACVIAPTRELAFQIS----------------------------- 96
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
+ F A+ +G+ + VG + + L K+P
Sbjct: 97 ----------EQFEALGSVIGVRCAVIVGGMDMMSQSIALSKKPH--------------- 131
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
+++ TPGRL+DH+ T+GF L+HL YLV+DE DRLL + A + VL++ +
Sbjct: 132 ------VIICTPGRLVDHLENTKGFNLKHLKYLVMDEADRLLDLDFGAEIEKVLKVIPRE 185
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
+T+L SAT+T KL + L
Sbjct: 186 R-------NTYL-------------------------------FSATMTSKVEKLQRASL 207
Query: 328 HHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
+P+ + T+Y + L Y K K YL LL L + CIVFT + ST +L
Sbjct: 208 VNPVKVEVA-TKYSTVDTLLQYYTFFPYKQKECYLTYLLNELSGQTCIVFTLTCASTQKL 266
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
+L + G + + G Q R L F+ G +L+++D +RG+D+ GV+ V+
Sbjct: 267 ALMLRNLGFEAVCL---HGQLTQPKRLGALAKFKSGGRNILIATDVASRGLDIPGVDVVI 323
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
NYD P K YIHR GRTARAG+ G+ TL+ + +V+ ++++
Sbjct: 324 NYDVPQSSKDYIHRVGRTARAGRSGKSITLVTQYDVEWYQRI 365
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 212/482 (43%), Gaps = 113/482 (23%)
Query: 8 SMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGL 67
S+P P + F+D + + C A +G + +Q+ E I L
Sbjct: 9 SLPEEPQPTVEEETKTFKDLGVTDVLC------EACDQLGWTKPTKIQI----EAIPMAL 58
Query: 68 FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCK 127
RD+ + TGSGKT ++ALPI+ L + R L ALV+ PTR+LA Q++
Sbjct: 59 QGRDIIGLAETGSGKTGAFALPILNALLDTPQR-LFALVLTPTRELAFQIS--------- 108
Query: 128 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 187
+ F A+ ++G+ + VG + L
Sbjct: 109 ------------------------------EQFEALGSSIGVQCAVIVGGIDSMSQSLAL 138
Query: 188 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
K+P +++ATPGRL+DH+ T+GF L L YLV+DE DR
Sbjct: 139 AKKPH---------------------VVIATPGRLIDHLENTKGFNLRALKYLVMDEADR 177
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
+L ++ + +L++ D + TFL
Sbjct: 178 ILNMDFETEVDKILKVIPRDRK-------TFL---------------------------- 202
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L SK K YLV +L
Sbjct: 203 ---FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 258
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
L ++F S+ +T R LL + G I + G QS R +L F+ +
Sbjct: 259 ELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSKRLGSLNKFKAKARSI 315
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T + + +V+ F+
Sbjct: 316 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQ 375
Query: 488 KL 489
++
Sbjct: 376 RI 377
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ + +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKESSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 46 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 102
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 103 LAFQIS---------------------------------------EQFEALGSSIGVQCA 123
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 124 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 162
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 163 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 202
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 203 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 243
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 244 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 300
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 301 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 360
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 361 KAITFVTQYDVELFQRI 377
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQCA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSIALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 200/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+QTL R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPMALQGRDIIGLAETGSGKTGAFALPILQTLLESPQR-LYALVLTPTRE 98
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSSIGVKSA 119
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDMMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 158
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L + YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRAIKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ +KL + L P+ ++Y+ E+L+ + +
Sbjct: 199 ------------------FSATMTKKVHKLQRAALKDPVKCAVS-SKYQTVEKLQQFYVF 239
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R+ LL + G I + G Q+
Sbjct: 240 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMG---QNK 296
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGALNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 357 KAITFVSQYDVELFQRI 373
>gi|443720455|gb|ELU10207.1| hypothetical protein CAPTEDRAFT_141736, partial [Capitella teleta]
Length = 616
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 218/482 (45%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ NMG + P+Q A TI L +D+C + TG+GKT ++ LP+++ L
Sbjct: 44 PLLK-AIANMGFTQPTPIQGA----TIPVALLGKDICACAATGTGKTAAFLLPVLERLLY 98
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV+ PTR+LA+Q+ H++A QF
Sbjct: 99 RPRQAPVTRVLVLTPTRELAVQI------------------HTVARQLTQF--------- 131
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ L+ G + + EA + P DI
Sbjct: 132 ------------TNIETSLSAGGMDVKAQ----------EAALRLGP-----------DI 158
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH++ F L + L++DE DR+L E + + V+ L
Sbjct: 159 VIATPGRLIDHLHNAPNFNLNSVEVLILDEADRMLDEYFAEQMKEVISL----------- 207
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T+R+ M+ SAT+T++ LA + L+ P+ +
Sbjct: 208 -----------CATVRQT----------------MLFSATMTEEVKDLAAVSLNSPVKIF 240
Query: 335 TGE-TRYKLPERLESYKLICESKLKPLYLV-ALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
E T+ L R E ++ + +V ALL+ ++ +VF + + HRL +L
Sbjct: 241 VNENTQVALNLRQEFIRIRPNREGDREAVVGALLKRTFHDQVMVFVQTKKQAHRLHIILG 300
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G I++ E G Q R ++LK F++G + VL+++D RG+D++GV V+N+ P
Sbjct: 301 LLG---IRVGELHGNLSQQQRLESLKRFKDGDVDVLLATDLAARGLDIDGVRTVINFTMP 357
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
+ YIHR GRTARAG+ GR TL + E K K++++KA + P+ S +P ++
Sbjct: 358 STCAHYIHRVGRTARAGKSGRAITLAGEQERKVLKEVVKKA---TLPVKSRVVPQDVVTR 414
Query: 511 LR 512
R
Sbjct: 415 FR 416
>gi|50547515|ref|XP_501227.1| YALI0B22572p [Yarrowia lipolytica]
gi|74660077|sp|Q6CDN5.1|DBP6_YARLI RecName: Full=ATP-dependent RNA helicase DBP6
gi|49647093|emb|CAG83480.1| YALI0B22572p [Yarrowia lipolytica CLIB122]
Length = 607
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 223/498 (44%), Gaps = 101/498 (20%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--W-- 59
++K + P +R+ V + + D L + L +G + F VQ AV W
Sbjct: 165 SRKTQLQTQPILRNATYVEIDDVGSFDEFD-LSKNMMKNLDTLGYTKAFSVQKAVIPWLL 223
Query: 60 --QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
Q+ + P + DL +++ TGSGKT +Y +PI++ L +R V +RA+VVLPT+ L +Q
Sbjct: 224 AQQKLLAPDR-KPDLLVSASTGSGKTATYGIPIIEKLRDRIVPRIRAVVVLPTKPLVMQ- 281
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
V+DV ++ LSV
Sbjct: 282 --------------------------------------VRDVLENLSKGSSLSV------ 297
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
++ ++ S +R LE DI+VA PGRL++ + ++
Sbjct: 298 VALRNDRSTKRERAVLETA----------------DIVVAAPGRLVEQVKENPEL-FSYI 340
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LVVDE DRLL + Y W +VLQ +N+ R T L + +R
Sbjct: 341 EFLVVDEADRLLGQDYYDW-ASVLQ----NNQQRAQAGKTNLTEHY-----VRN------ 384
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKLICESK 356
+ ++ SATLT +P +A +D+H+P +F+ Y +P+ L +
Sbjct: 385 --------MQTLIFSATLTANPEHIASMDIHNPGVFVIGSSDSYSIPKSLTEIVTHVSAA 436
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN----HFGELRIKIKEYSGLQRQSV 412
KPL L LL + +VFT S E+ R+ ++ KI S
Sbjct: 437 EKPLMLCELLVQRDINRGVVFTKSSETAARVARMMEIMDADIFHKDWKIAAVSAETSSVH 496
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +++K F +GKI LV +D ++RG+D V+NV+NYD P+ + Y+HR GRTARAG+ G
Sbjct: 497 RRRSMKQFIDGKIDFLVCTDLVSRGIDF-VVDNVINYDIPSGKREYVHRVGRTARAGREG 555
Query: 473 RCFTLL-HKDEVKRFKKL 489
+T L E K F+++
Sbjct: 556 NAYTFLTGSGEAKWFREI 573
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|303317380|ref|XP_003068692.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108373|gb|EER26547.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 474
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ F A+ + +
Sbjct: 128 LAYQISQQ---------------------------------------FEALGSLISVRCA 148
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 149 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 187
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L L YLV+DE DRLL + L +L++ LP RR
Sbjct: 188 SLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 225
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
+ SAT++ L + L +PL ++ +Y+ L LI
Sbjct: 226 ----------------YLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLI 269
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K +YL+ LL + I+FT +V T RL LL G I + G QS
Sbjct: 270 IPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSA 326
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 327 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 386
Query: 473 RCFTLLHKDEVKRFKKL 489
R F+L+ + +V+ ++++
Sbjct: 387 RAFSLVTQYDVEIWQRI 403
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 197/435 (45%), Gaps = 105/435 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E + L RD+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 51 IQREALPVALQGRDVIGLAETGSGKTASFALPILQALLETPQR-LFALVLTPTRELAFQI 109
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 110 S---------------------------------------EQFEALGASIGVKSAVIVGG 130
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P +++ATPGRL+DH+ T+GF L+ L
Sbjct: 131 IDMMTQALTLAKKP---------------------HVIIATPGRLVDHLENTKGFNLKSL 169
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++
Sbjct: 170 KYLVMDEADRILNMDFEEEVDKILRVI--------------------------------- 196
Query: 298 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
PR + L SAT+T+ KL + L P+ + ++Y+ E+L Y L +K
Sbjct: 197 ------PRERRTYLYSATMTKKVQKLQRASLRDPVKVEVS-SKYQTVEKLMQYYLFIPAK 249
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K +YLV LL L +VF S+ +T R LL + G I + G Q+ R
Sbjct: 250 FKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLHGQMG---QAKRLGA 306
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T
Sbjct: 307 LTKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAIT 366
Query: 477 LLHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 367 FVTQYDVELYQRIEQ 381
>gi|119186961|ref|XP_001244087.1| hypothetical protein CIMG_03528 [Coccidioides immitis RS]
gi|118595828|sp|Q1E1N5.1|RRP3_COCIM RecName: Full=ATP-dependent rRNA helicase RRP3
gi|392870806|gb|EAS32639.2| ATP-dependent rRNA helicase RRP3 [Coccidioides immitis RS]
Length = 474
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ F A+ + +
Sbjct: 128 LAYQISQQ---------------------------------------FEALGSLISVRCA 148
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 149 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 187
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L L YLV+DE DRLL + L +L++ LP RR
Sbjct: 188 SLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 225
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
+ SAT++ L + L +PL ++ +Y+ L LI
Sbjct: 226 ----------------YLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLI 269
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K +YL+ LL + I+FT +V T RL LL G I + G QS
Sbjct: 270 IPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSA 326
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 327 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 386
Query: 473 RCFTLLHKDEVKRFKKL 489
R F+L+ + +V+ ++++
Sbjct: 387 RAFSLVTQYDVEIWQRI 403
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVQCA 126
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 165
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 246
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 247 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 303
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 364 KAITFVTQYDVELFQRI 380
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVQCA 126
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 165
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 246
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 247 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 303
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 364 KAITFVTQYDVELFQRI 380
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 193/444 (43%), Gaps = 107/444 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A+Q M + P+Q E I L +D+ + TGSGKT ++A+PI+Q L
Sbjct: 78 LVPDLLEAIQQMNFAKPTPIQ----SEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQAL 133
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A LV+ PTR+LA Q+
Sbjct: 134 WH-AQTPYFGLVLAPTRELAFQI------------------------------------- 155
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
KD F A+ +GL VG + D+ +L+++P I
Sbjct: 156 --KDTFDALGATMGLRSVCIVGGMDMMDQARDLMRKPH---------------------I 192
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGR+MDH+ T+GF+L++L YLV+DE DRLL + L +L++
Sbjct: 193 IVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKV----------- 241
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+P P+ + SAT+T KL + LH+P+ +
Sbjct: 242 ----IP-----------------------PKRTTYLFSATMTNKIEKLQRASLHNPVRVA 274
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
T+Y+ + L ++ K L+ LL + IVFT +V R L
Sbjct: 275 VS-TKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARIL 333
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G Q+ R +L F+ K +LV++D RG+D+ V+ V+NYD P
Sbjct: 334 GFNAVPL---HGQLSQAQRLGSLNKFKSSKANILVATDVAARGLDIPSVDVVINYDIPTD 390
Query: 455 IKTYIHRAGRTARAGQLGRCFTLL 478
K YIHR GRTARAG+ G+ +L+
Sbjct: 391 SKAYIHRVGRTARAGRSGKSISLI 414
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQV--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 206/452 (45%), Gaps = 109/452 (24%)
Query: 38 RLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--- 94
+L A N+G + +Q+ E+I L +DL + TGSGKT ++ALPI+Q+L
Sbjct: 19 QLVTACDNLGWKNPTKIQI----ESIPHALEGKDLIGLAQTGSGKTGAFALPILQSLLEA 74
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
S ++V+ A V+ PTR+LA+Q IAE
Sbjct: 75 SEKSVQAFFACVLSPTRELAIQ---------------------IAEQ------------- 100
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
F A+ +G+ + VG + + L KRP I
Sbjct: 101 -----FEALGSDIGVKCAVLVGGVDMVQQSIALGKRP---------------------HI 134
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGRL+DH++ T+GF+L L YLV+DE DRLL E ++ L +L++ +
Sbjct: 135 VVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSLDEILKVIPRERR----- 189
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
TFL SAT+T+ KL + L +P+ +
Sbjct: 190 --TFL-------------------------------FSATMTKKVKKLQRACLRNPVKIE 216
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
++Y + L+ +K K YLV +L +VFT + ++T L +L +
Sbjct: 217 AA-SKYSTVDTLKQEYRFIPAKYKDCYLVYILTEKSGSTSMVFTRTCDATTFLALVLRNL 275
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I I +G QS R L F+ G+ +L+ +D +RG+D+ V+ V+NYD P
Sbjct: 276 GLRAIPI---NGHMTQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 332
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
K YIHR GRTARAG+ G +L+++ EV+ F
Sbjct: 333 SKDYIHRVGRTARAGRSGVAISLVNQYEVEWF 364
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQCA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQCA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 40 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 96
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 97 LAFQIS---------------------------------------EQFEALGSSIGVQSA 117
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 118 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 156
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 157 NLRALKYLVMDEADRILNMDFETEVDKILKVNPRDRK-------TFL------------- 196
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 197 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 237
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 238 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 294
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 295 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 354
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 355 KAITFVTQYDVELFQRI 371
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 200/438 (45%), Gaps = 107/438 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P +V + E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 85 PTKVQI--EAIPLALQGRDVIGLAETGSGKTAAFALPILQALLEHPQR-LFALVLTPTRE 141
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q IAE F A+ +G+ V
Sbjct: 142 LAYQ---------------------IAEQ------------------FEALGACIGIKVA 162
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P ++VATPGRL+DH+ T+GF
Sbjct: 163 VIVGGVDMVTQALCLAKKPH---------------------VIVATPGRLVDHLENTKGF 201
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L L YLV+DE DR+L +++ + +LQ+
Sbjct: 202 SLRSLKYLVMDEADRILDMDFESEVNKILQVI---------------------------- 233
Query: 293 GVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
PR K L SAT+T+ KL + L P+ + ++Y+ ++L+ + +
Sbjct: 234 -----------PRERKTYLFSATMTKKVTKLQRASLQDPVKVEVS-SKYQTVDKLQQHYI 281
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K YLV +L + + CIVFTS+ ++ R LL + G + + G Q+
Sbjct: 282 FIPQKFKDCYLVYILNEMAGKSCIVFTSTCANSLRTALLLRNLGFTAVPL---HGQMSQA 338
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+
Sbjct: 339 KRLGALNKFKAKDRSILIATDVASRGLDIPHVDLVINFDIPTHSKDYIHRVGRTARAGRA 398
Query: 472 GRCFTLLHKDEVKRFKKL 489
G T + + +V+ ++++
Sbjct: 399 GISITFVTQYDVELYQRI 416
>gi|340372235|ref|XP_003384650.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Amphimedon queenslandica]
Length = 598
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 218/473 (46%), Gaps = 116/473 (24%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA--VRCLRALVVLP 109
F +V TI L +D+C + TG+GKT ++ LPI++ L R +R R L++LP
Sbjct: 165 FTSPTSVQARTIPLALMGKDICACAATGTGKTAAFMLPILERLLYRPTRMRSTRVLILLP 224
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+LA+QV+S + +A ++ ++C L
Sbjct: 225 TRELAIQVHS---------VGKALAQNTKIDLC--------------------------L 249
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
+ G G+S A L+ + DI++ATPGRL+DH++ T
Sbjct: 250 AAGGLEGRSQEAS-------------------------LRKSPDIVIATPGRLVDHLHNT 284
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F+L+ + LV+DE DR+L E + + + I
Sbjct: 285 PSFSLQAIEILVLDEADRMLDEHFLDQMNEI----------------------------I 316
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERL 346
R C V R ++ SAT+T + +LA+L LH+P+ + + +T L +
Sbjct: 317 RLCPVSRQ----------TLLFSATMTDEVEELARLSLHNPVRVFVDSNTDTADNLHQEF 366
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ E+ + + L+S ++ C+VF + + HR +L G L IK E G
Sbjct: 367 VRIRSNKEADREAIVSALCLRSF-KDHCLVFVPTKKQAHRQRLIL---GLLGIKTSELHG 422
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
Q R + LK F+E ++ +L+++D RG+D+E V V+NY P +K YIHR GRTA
Sbjct: 423 SLTQLQRLEALKGFKEAEVDILIATDLAARGLDIENVRTVINYSMPPTVKQYIHRVGRTA 482
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLRPVYKS 517
RAG+ G+ TL+ + K K++++ A CP + IP+ +IE YKS
Sbjct: 483 RAGKSGKSVTLVGEKGRKVLKEIVKGA---KCPPKNRVIPAEVIEK----YKS 528
>gi|326911793|ref|XP_003202240.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Meleagris gallopavo]
Length = 447
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 199/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L + R L ALV+ PTR+
Sbjct: 42 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDAPQR-LFALVLTPTRE 98
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSSIGVHSA 119
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLVDHLENTKGF 158
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L +LV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 199 ------------------FSATMTKQVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 239
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 240 IPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQNK 296
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 357 KSITFVTQYDVELFQRI 373
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 192/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +++G S P+Q QE+I P L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 73 ACESLGYKSPTPIQ----QESIPPALAGRDLIGLAETGSGKTAAFALPILQALLDKP-QP 127
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ + F
Sbjct: 128 LFGLVLAPTRELAYQISKS---------------------------------------FE 148
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ + + + VG + + L K+P I+VATPGR
Sbjct: 149 GLGILISVRCAVIVGGMDMVTQSIALGKKPH---------------------IIVATPGR 187
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 188 LLDHLENTKGFSLRALKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 232
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL + +Y+
Sbjct: 233 E-------RRT----------------YLFSATMSSKVESLQRASLRDPLRVQISTNKYQ 269
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K YL+ LL + IVFT +V T RL LL G I +
Sbjct: 270 TVSTLLQSYLFIPHPHKDTYLIYLLNDFAGQSAIVFTRTVNETQRLAILLRTLGFGAIPL 329
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 330 ---HGQLSQSARLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDLPPDSKTYIHR 386
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G +++ + +V+
Sbjct: 387 VGRTARAGKSGHAISIVTQYDVE 409
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 207/468 (44%), Gaps = 116/468 (24%)
Query: 33 PCLDPRLKVALQNMGISSLF-----------PVQVAVWQETIGPGLFERDLCINSPTGSG 81
P L+ +++G++ + P ++ + E I L RD+ + TGSG
Sbjct: 16 PALEEEEAKTFKDLGVTDVLCEACDQLGWTKPTKIQI--EAIPLALQGRDIIGLAETGSG 73
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
KT ++ALPI+ L R L ALV+ PTR+LA Q++
Sbjct: 74 KTGAFALPILNALLETPQR-LFALVLTPTRELAFQIS----------------------- 109
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 201
+ F A+ ++G+ + VG + L K+P
Sbjct: 110 ----------------EQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH--------- 144
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L
Sbjct: 145 ------------IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
++ D + TFL SAT+T+ K
Sbjct: 193 KVIPRDRK-------TFL-------------------------------FSATMTKKVQK 214
Query: 322 LAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 381
L + L +P+ ++Y+ E+L+ Y + SK K YLV +L L ++F S+
Sbjct: 215 LQRAALKNPVKCAVS-SKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTC 273
Query: 382 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
+T R LL + G I + G QS R +L F+ +L+++D +RG+D+
Sbjct: 274 NNTQRTALLLRNLGFTAIPL---HGQMNQSKRLGSLNKFKAKARSILLATDVASRGLDIP 330
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
V+ VVN+D P + K YIHR GRTARAG+ G+ T + + +V+ F+++
Sbjct: 331 HVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 378
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 210/460 (45%), Gaps = 108/460 (23%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ +G + +QV E++ L RD+ + TGSGKT ++ALPI+
Sbjct: 22 LGLIDPLLE-ALEQVGYKTPTDIQV----ESLPHALEGRDIIGVASTGSGKTAAFALPIL 76
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
Q L + L A V+ PTR+LA Q++ QF+SL
Sbjct: 77 QKLWEDP-KGLFACVLAPTRELAYQISQ------------------------QFESL--- 108
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
A+G + VG + + L KRP
Sbjct: 109 ------------GSAMGARCAVIVGGMDMPAQAIALAKRPH------------------- 137
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
I+VATPGRLM H+ T+GF+L + +LV+DE DRLL + A + +L++ +
Sbjct: 138 --IVVATPGRLMQHLEETKGFSLRSIKFLVLDEADRLLDLDFGASIDKILKVIPKER--- 192
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
+T+L SAT+T KL + L +P+
Sbjct: 193 ----TTYL-------------------------------FSATMTTKVAKLQRASLSNPV 217
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
+ ++Y+ L Y L+ K K YL+ L+ SL + I+FT +V RL +L
Sbjct: 218 RIEV-SSKYQTVSTLLQYYLLMPLKDKDAYLIYLINSLAQNSIIMFTRTVHDAQRLSIIL 276
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
G + + G QS R L F+ G +VLV++D +RG+D+ V+ V+N+D
Sbjct: 277 RTLGFPAVPLH---GQLSQSQRLGALGKFKSGGRRVLVATDVASRGLDIPSVDIVINFDI 333
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
P + K YIHR GRTARAG+ G+ TL+ + +V+ +++ Q
Sbjct: 334 PTHSKDYIHRVGRTARAGRAGKSITLVTQYDVELVQRIEQ 373
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 199/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L + R L ALV+ PTR+
Sbjct: 48 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDAPQR-LFALVLTPTRE 104
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 105 LAFQIS---------------------------------------EQFEALGSSIGVHSA 125
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 126 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLVDHLENTKGF 164
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L +LV+DE DR+L ++ + +L++ D + TFL
Sbjct: 165 NLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 204
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 205 ------------------FSATMTKQVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 245
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 246 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQNK 302
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 303 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 362
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 363 KSITFVTQYDVELFQRI 379
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 42 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 98
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 99 LAFQIS---------------------------------------EQFEALGSSIGVQSA 119
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 120 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 158
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 159 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 198
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 199 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 239
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 240 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 296
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 297 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 356
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 357 KAITFVTQYDVELFQRI 373
>gi|169844029|ref|XP_001828736.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
gi|116510107|gb|EAU93002.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
Length = 754
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 207/459 (45%), Gaps = 115/459 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
A+ ++G + P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L R
Sbjct: 188 AISSLGFTKPTPIQAS----TIPVALLGKDIVGNAVTGSGKTAAFMIPMLERLLYREKGK 243
Query: 98 ---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A RCL ++LPTR+LA+Q C + + H+ + C
Sbjct: 244 RAAATRCL---ILLPTRELAVQ---------CYEVGKRLGAHTDIQFC------------ 279
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
L VG S+ + + L +RP D+
Sbjct: 280 ------------------LLVGGLSLKAQEAALRQRP---------------------DV 300
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH+ + GF L+ L LV+DE DR+L E + L +
Sbjct: 301 VLATPGRLIDHVRNSVGFNLDSLDILVLDEADRMLSEGFADELTEI-------------- 346
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
I+ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 347 --------------IKAC---------PKSRQT-MLFSATMTDSVDELIKMSLNKPVRLF 382
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
R ++ + I + +P LVAL + + K I+F S + H++ + +
Sbjct: 383 VDPKRSTARGLIQEFVRIRKESDRPAMLVALCKQTYKHKVIIFVRSKKLAHQMRIVFSLL 442
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G +K E G Q R + L++FREG + L+++D +RG+D++GV VVNYD P
Sbjct: 443 G---MKCAELHGDLSQEQRLQALQSFREGSVDYLMATDLASRGLDIKGVETVVNYDMPGQ 499
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
+ Y+HR GRTARAG+ G+ TL+ + + K K ++ A
Sbjct: 500 MAQYLHRVGRTARAGRKGKSVTLVGEADRKLLKAAIKHA 538
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 202/460 (43%), Gaps = 107/460 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 63 ACTSLGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPY 118
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA+Q++ A F
Sbjct: 119 F-GLVLAPTRELAVQISEA---------------------------------------FE 138
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 139 ALGSLISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGR 177
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 178 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPR 222
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 223 E-------RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 320 H---GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHR 376
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
GRTARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 377 VGRTARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 201/460 (43%), Gaps = 107/460 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 63 ACTSLGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPY 118
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA+Q+ A F
Sbjct: 119 F-GLVLAPTRELAVQITEA---------------------------------------FE 138
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 139 ALGSLISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGR 177
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 178 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPR 222
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 223 E-------RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 320 H---GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHR 376
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
GRTARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 377 VGRTARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 193/429 (44%), Gaps = 103/429 (24%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+LA Q++
Sbjct: 53 EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRELAFQIS-- 109
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+ F A+ ++G+ + VG
Sbjct: 110 -------------------------------------EQFEALGSSIGVQSAVIVGGIDS 132
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+ L K+P I++ATPGRL+DH+ T+GF L L YL
Sbjct: 133 MSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGFNLRALKYL 171
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR+L ++ + +L++ D + TFL
Sbjct: 172 VMDEADRILNMDFETEVDKILKVIPRDRK-------TFL--------------------- 203
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 360
SAT+T+ KL + L +P+ ++Y+ E+L+ Y + SK K
Sbjct: 204 ----------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIFIPSKFKDT 252
Query: 361 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 420
YLV +L L ++F S+ +T R LL + G I + G QS R +L F
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSKRLGSLNKF 309
Query: 421 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T + +
Sbjct: 310 KAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ 369
Query: 481 DEVKRFKKL 489
+V+ F+++
Sbjct: 370 YDVELFQRI 378
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 194/444 (43%), Gaps = 107/444 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A+Q M + P+Q E I L +D+ + TGSGKT ++A+PI+Q L
Sbjct: 72 LIPELLEAIQQMKFTKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQAL 127
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A LV+ PTR+LA Q+
Sbjct: 128 WE-AQAAYYGLVLAPTRELAYQI------------------------------------- 149
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
K+ F A+ ++GL VG + D+ +L+++P I
Sbjct: 150 --KETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPH---------------------I 186
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
LVATPGR+MDH+ T+GF+L++L YLV+DE DRLL + L +L++ +
Sbjct: 187 LVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKIIPTQR------ 240
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + LH+P+ +
Sbjct: 241 -TTYL-------------------------------FSATMTNKIAKLQRASLHNPVRVA 268
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ K YL+ LL + I+FT + + R L
Sbjct: 269 VS-NKYQTADNLVQSMMLVSDGYKNTYLIHLLNEFLGKSIIIFTRTCAHSQRTALLARIL 327
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G Q+ R +L F+ GK +L+++D RG+D+ V+ V+NYD P
Sbjct: 328 GFSAVPL---HGQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIPTD 384
Query: 455 IKTYIHRAGRTARAGQLGRCFTLL 478
K YIHR GRTARAG+ G+ +L+
Sbjct: 385 SKAYIHRVGRTARAGKSGKSISLI 408
>gi|344243858|gb|EGV99961.1| putative ATP-dependent RNA helicase DDX47 [Cricetulus griseus]
Length = 586
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 178 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 234
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 235 LAFQIS---------------------------------------EQFEALGSSIGVQCA 255
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 256 VIVGGIDSMSQSIALAKKPH---------------------IVIATPGRLIDHLENTKGF 294
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 295 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 334
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 335 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 375
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 376 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 432
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 433 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 492
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 493 KAITFVTQYDVELFQRI 509
>gi|449017072|dbj|BAM80474.1| DEAD box protein [Cyanidioschyzon merolae strain 10D]
Length = 453
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 193/435 (44%), Gaps = 95/435 (21%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++A+PI+Q L R ALV+ PTR+LA Q+
Sbjct: 45 IQREAIPAALAGKDIVGLAQTGSGKTAAFAIPILQFLLEDP-RPYFALVLSPTRELAFQI 103
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ V VG
Sbjct: 104 S---------------------------------------EQFLALGSEIGVRVATLVGG 124
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L KRP ++V TPGR++DH+ AT+GFTL+H+
Sbjct: 125 MDMVGQAVTLAKRPH---------------------VVVGTPGRVVDHLTATKGFTLKHV 163
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
LV+DE DRLL ++ L +L + RSD + S TF +
Sbjct: 164 RILVLDEADRLLNMDFEEELDQILAAVPRSDADP--SKGETFARKTY------------- 208
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-ETRYKLPERLESYKLICES 355
+ SAT+T KL + L + +Y E L + L
Sbjct: 209 -------------LFSATMTSQVAKLQRASLRSKETVRIEVSAKYSTVETLVQHYLFIPE 255
Query: 356 KLKPLYLVALLQSL-GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRS 414
K K YL L + L CIVFT + S RL +L + G + I G Q R
Sbjct: 256 KYKDCYLTYLFEELVARHSCIVFTDTQSSAQRLALMLRNLGYGAVCIH---GGMSQPNRL 312
Query: 415 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 474
L F+ G+ +LV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ GR
Sbjct: 313 GALNQFKSGEKHILVATDVASRGLDIPLVDFVINYDIPPHGKDYIHRVGRTARAGRTGRA 372
Query: 475 FTLLHKDEVKRFKKL 489
+L+ + +V+ F+K+
Sbjct: 373 ISLVSQYDVELFQKV 387
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 201/460 (43%), Gaps = 107/460 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 63 ACTSLGYKTPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPY 118
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA+Q+ A F
Sbjct: 119 F-GLVLAPTRELAVQITEA---------------------------------------FE 138
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 139 ALGSLISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGR 177
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 178 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPR 222
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 223 E-------RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 320 H---GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHR 376
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
GRTARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 377 VGRTARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVQCA 126
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDSMSQSLALAKKPH---------------------VVIATPGRLIDHLENTKGF 165
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 246
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 247 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 303
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 364 KAITFVTQYDVELFQRI 380
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVHCA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 196/434 (45%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 48 IQKEAIPLTLQGRDVIGLAETGSGKTGAFALPILQALLQNPQRYF-ALILTPTRELAFQI 106
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 107 SEQ---------------------------------------FQALGSKIGVKTAVIVGG 127
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P +++ATPGRL+DH+ T+GF L+ L
Sbjct: 128 MDMMSQALLLAKKPH---------------------VIIATPGRLVDHLENTKGFNLKAL 166
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 167 KFLVMDEADRILNMDFEVEVDKILKV---------------IPRE-------RRT----- 199
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
++ SAT+TQ KL + LH P+ + ++Y+ ++L+ Y L K
Sbjct: 200 -----------LLFSATMTQKVQKLQRASLHDPVKVEVS-SKYQTVDKLQQYYLFIPVKF 247
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV+++ + ++F + +T R LL G I + G Q+ R L
Sbjct: 248 KDVYLVSIINEMAGNTFMIFCGTCHNTLRTALLLRQLGFTAIPL---HGQMSQNKRLGAL 304
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
FR +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 305 TKFRAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 364
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 365 VTQYDVELYQRIEQ 378
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 197/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT S+ALPI+Q L R L ALV+ PTR+LA Q+
Sbjct: 51 IQKESIPLALQGKDVIGLAETGSGKTGSFALPILQALLETPQR-LFALVLTPTRELAFQI 109
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ + VG
Sbjct: 110 S---------------------------------------EQFEALGAGIGVKCAVVVGG 130
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P +++ATPGRL+DH+ T+GF+L+ L
Sbjct: 131 IDMMTQALTLAKKPH---------------------VVIATPGRLVDHLENTKGFSLKAL 169
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++ + T+L
Sbjct: 170 KYLVMDEADRILNMDFEEEVDKILRVIPRERH-------TYL------------------ 204
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + ++Y+ E+L Y L +K
Sbjct: 205 -------------YSATMTKKVQKLQRASLKDPVKVEVS-SKYQTVEKLMQYYLFIPAKF 250
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV LL L +VF S+ +T R LL + G I + G Q+ R L
Sbjct: 251 KDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPL---HGQMGQAKRLGAL 307
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T
Sbjct: 308 NKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAITF 367
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 368 VTQYDVELYQRI 379
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 199/437 (45%), Gaps = 107/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 109
P ++ V E + L +DL + TGSGKT ++ALPI+Q L S ++V+ A V+ P
Sbjct: 49 PTKIQV--EAVPHALEGKDLIGLAQTGSGKTGAFALPILQALLESSQKSVQPFFACVLSP 106
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+LA+Q IAE F A+ +GL
Sbjct: 107 TRELAIQ---------------------IAEQ------------------FEALGSGIGL 127
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
G+ VG I + L KRP I+VATPGRL+DH++ T
Sbjct: 128 RCGVLVGGVDIVQQTLILAKRPH---------------------IVVATPGRLLDHLSNT 166
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
+GF+L L YLV+DE DRLL E ++ L +L + D + T+L
Sbjct: 167 KGFSLRTLKYLVLDEADRLLNEEFEKSLDEILNVIPRDRK-------TYL---------- 209
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 349
SAT+T+ KL + L +P+ + ++Y + L+
Sbjct: 210 ---------------------FSATMTKKVKKLQRACLRNPVKIEAA-SKYSTVDTLKQQ 247
Query: 350 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 409
SK K YLV +L + +VFT + ++T L +L + G I I +G
Sbjct: 248 YRFVPSKHKDCYLVYILTEMSNSTAMVFTRTCDATSFLALVLRNLGLRAIPI---NGHMS 304
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
Q R L F+ + VL+ +D +RG+D+ V+ V+NYD P+ K YIHR GRTARAG
Sbjct: 305 QPKRLGALNKFKARECNVLICTDVASRGLDIPSVDMVINYDVPSNSKDYIHRVGRTARAG 364
Query: 470 QLGRCFTLLHKDEVKRF 486
+ G +L+++ E++ +
Sbjct: 365 RSGVAISLVNQYELEWY 381
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 64 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 120
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 121 LAFQIS---------------------------------------EQFEALGSSIGVQSA 141
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 142 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 180
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 181 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKT---------------------- 218
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
++ SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 219 ----------------LLFSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 261
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 262 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 318
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 319 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 378
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 379 KAITFVTQYDVELFQRI 395
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQV--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQTA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------VVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKDPVKCAV-SSKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KSITFVTQYDVELFQRI 378
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E + L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAVPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 201/460 (43%), Gaps = 107/460 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 63 ACTSLGYKNPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPY 118
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA+Q+ A F
Sbjct: 119 F-GLVLAPTRELAVQITEA---------------------------------------FE 138
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 139 ALGSLISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGR 177
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 178 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPR 222
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 223 E-------RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 320 H---GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHR 376
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
GRTARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 377 VGRTARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 53 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 109
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 110 LAFQIS---------------------------------------EQFEALGSSIGVQSA 130
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 131 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 169
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 170 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 209
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 210 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 250
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 251 IPSKFKDTYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQTK 307
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 308 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 367
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 368 KSITFVTQYDVELFQRI 384
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 199/434 (45%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 103 S---------------------------------------EQFEALGSSIGVKCAVIVGG 123
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P IL+ATPGRL+DH+ T+GF L L
Sbjct: 124 MDMMSQALILAKKPH---------------------ILIATPGRLIDHLENTKGFNLRSL 162
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 163 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 195
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 196 -----------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKF 243
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F ++ +T R LL + G + + G Q+ R L
Sbjct: 244 KDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAAL 300
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 301 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 360
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 361 VTQYDVELYQRIEQ 374
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYVF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 210/464 (45%), Gaps = 112/464 (24%)
Query: 37 PRLKVALQNMGISSLF--PVQVAVWQ-------ETIGPGLFERDLCINSPTGSGKTLSYA 87
P V +++G++ + ++ W+ E+I L D+ + TGSGKT S+A
Sbjct: 23 PEETVTFKSLGVTDVLCEACEILGWKAPSKIQKESIPVALQGSDVIGLAETGSGKTGSFA 82
Query: 88 LPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
LP++QTL + R + LV+ PTR+LA Q++
Sbjct: 83 LPVLQTLLDNPQR-MYCLVLTPTRELAFQIS----------------------------- 112
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
+ F A+ ++G+ + VG + + L K+P
Sbjct: 113 ----------EQFEALGASIGVKCAVIVGGMDMMTQSMVLAKKP---------------- 146
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ +
Sbjct: 147 -----HIIIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFEQEVNKILKVIPKE 201
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
+ T+L SAT+T KL + L
Sbjct: 202 RK-------TYL-------------------------------YSATMTSKVAKLQRACL 223
Query: 328 HHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
+P+ + T+Y+ ++L+ +K K +YLV +L L IVF S+ +T R+
Sbjct: 224 KNPVKVEVS-TKYQTVDKLQQSYCFIPAKFKDVYLVYILNELAGNSFIVFCSTCANTQRV 282
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
+L + G I + G Q+ R L F+ +L+++D +RG+D+ VN VV
Sbjct: 283 ALMLRNLGMTAIPL---HGQMNQTKRLGALNKFKSKSRSILIATDVASRGLDIPHVNVVV 339
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
N+D P + K YIHR GRTARAG+ G+ TL+ + +V+ ++++ Q
Sbjct: 340 NFDIPTHSKDYIHRVGRTARAGKSGKAITLVTQYDVELYQRIEQ 383
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 196/432 (45%), Gaps = 105/432 (24%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q++
Sbjct: 47 EAIPLALEGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQIS-- 103
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+ F A+ ++G+ + VG +
Sbjct: 104 -------------------------------------EQFEALGSSIGVKCAVIVGGMDM 126
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+ L K+P IL+ATPGRL+DH+ T+GF+L L +L
Sbjct: 127 MSQALILAKKP---------------------HILIATPGRLVDHLENTKGFSLRSLKFL 165
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR+L ++ + +L++
Sbjct: 166 VMDEADRILNMDFEVEVDKILRVI------------------------------------ 189
Query: 301 KPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 359
PR K +L SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K
Sbjct: 190 ---PRERKTLLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKFKD 245
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
+YLV +L L ++F ++ +T R LL + G + + G Q+ R L
Sbjct: 246 VYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTK 302
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T +
Sbjct: 303 FKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVT 362
Query: 480 KDEVKRFKKLLQ 491
+ +V+ ++++ Q
Sbjct: 363 QYDVELYQRIEQ 374
>gi|406860112|gb|EKD13172.1| ATP-dependent rRNA helicase RRP3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 497
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 198/443 (44%), Gaps = 107/443 (24%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
+G + P+Q E+I L +RDL + TGSGKT ++ALPI+Q+L ++ + L
Sbjct: 89 LGYKAPTPIQA----ESIPLALQDRDLIALAETGSGKTAAFALPILQSLLDKP-QPFFGL 143
Query: 106 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 165
V+ PTR+LA Q++ + F A+
Sbjct: 144 VLAPTRELAYQISQS---------------------------------------FEALGS 164
Query: 166 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 225
+G+ + VG + + L K+P I+VA+PGRL+DH
Sbjct: 165 KIGVRCAVIVGGMDMVPQAIALGKKPH---------------------IIVASPGRLLDH 203
Query: 226 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 285
+ T+GF+L L YLV+DE DRLL + A + +L++ E R T+L
Sbjct: 204 LENTKGFSLRALKYLVMDEADRLLDLDFGAIIDKILKVI--PRERR-----TYL------ 250
Query: 286 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 345
SAT++ L + L PL ++ T+Y+
Sbjct: 251 -------------------------FSATMSSKVESLQRASLKDPLRVSV-STKYQTVST 284
Query: 346 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 405
L LI K +YLV L+ + I+FT +V T RL LL G I +
Sbjct: 285 LIQNCLIVPLVHKDVYLVYLMNEFAGQSAIIFTRTVNETQRLAILLRSLGFGAIPLH--- 341
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
G Q+ R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR GRT
Sbjct: 342 GQLSQTARLGALNKFRAGTRKILVATDVAARGLDIPSVDIVLNYDLPPESKTYIHRVGRT 401
Query: 466 ARAGQLGRCFTLLHKDEVKRFKK 488
ARAG+ G F+++ + +V+ F +
Sbjct: 402 ARAGKSGHAFSIVTQYDVEIFTR 424
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 216/469 (46%), Gaps = 114/469 (24%)
Query: 40 KVALQNM--------GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPI 90
+V+ Q+M G+SSL F + +TI L +D+ + TGSGKT ++ +PI
Sbjct: 230 QVSFQDMKLSRPILRGLSSLNFEDPTPIQSKTIPVALLGKDIVGAAVTGSGKTAAFVVPI 289
Query: 91 VQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSL 148
++ L R + R L++ PTR+LA+Q C N+ IA + +C
Sbjct: 290 LERLVYRPKKIPTSRVLIICPTRELAMQ---------CHNVAKRIAAFTDITLC------ 334
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
L VG S+ + EL KRP
Sbjct: 335 ------------------------LCVGGLSLKVQEQELRKRP----------------- 353
Query: 209 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 268
DI++ATPGR +DH+ ++GF+++++ +V+DE DR+L + + L +++L
Sbjct: 354 ----DIIIATPGRFIDHVRNSQGFSVDNIEIMVIDEADRMLEDGFADELNEIVKL----- 404
Query: 269 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 328
C P R M+ SAT+T+ + L +L L+
Sbjct: 405 -----------------------C---------PKSRQT-MLFSATMTEKVDDLVRLSLN 431
Query: 329 HPLFLTTGETRYKLPERLESYKLI--CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
P+ + + ++ + + +L+P LV + ++ + I+F + H+
Sbjct: 432 RPVRIFVDAKKATAKRLVQEFIRVRPQREQLRPAMLVHICKTFFHRRVIIFFRNKAFAHK 491
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
+ + FG + + E G Q R + L+ FR+GK+ L+++D +RG+D++GV V
Sbjct: 492 MRII---FGLVGLNATEIHGSLSQEQRVRALEDFRDGKVDYLLATDVASRGLDIKGVEFV 548
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
+NY+ PA + Y+HR GRTARAG+ GR +L+ +++ K K +L+ ++N
Sbjct: 549 INYEAPASHEIYLHRVGRTARAGRSGRAISLVGENDRKVIKDVLKSSEN 597
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L + R ALV+ PTR+
Sbjct: 48 PTKIQI--EAIPMALDGRDIIGLAETGSGKTGAFALPILNALLDTPQRFF-ALVLTPTRE 104
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 105 LAFQIS---------------------------------------EQFEALGSSIGVECA 125
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 126 VIVGGIDSMSQSLALAKKPH---------------------VIIATPGRLIDHLENTKGF 164
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L+L D + TFL
Sbjct: 165 NLRALKYLVMDEADRILNMDFETEVDKILKLIPRDRK-------TFL------------- 204
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 205 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 245
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 246 IPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 302
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 303 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 362
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ ++++
Sbjct: 363 KSITFVTQYDVELYQRI 379
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ V E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 49 PTKIQV--EAIPVALQGRDIIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVHTT 126
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDAMSQSLALAKKPH---------------------VIIATPGRLVDHLENTKGF 165
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 246
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 247 IPSKFKDSYLVHILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 303
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGALNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 364 KSITFVTQYDVELFQRI 380
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 189/437 (43%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 70 ACETLGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QS 124
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L L++ PTR+LA Q++ A F
Sbjct: 125 LFGLILAPTRELAYQISGA---------------------------------------FE 145
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 146 ALGSLISVRCAVIVGGMDMVPQAIALGKKPH---------------------IVVATPGR 184
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 185 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 229
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ ++Y+
Sbjct: 230 E-------RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSSKYQ 266
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K LYLV LL + IVFT +V T RL LL G I +
Sbjct: 267 TVSTLLQSYLFIPHKYKDLYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGAIPL 326
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTYIHR
Sbjct: 327 H---GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHR 383
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G F ++
Sbjct: 384 VGRTARAGKSGHAFNIV 400
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 191/432 (44%), Gaps = 102/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E+I L RDL + TGSGKT ++ALPI+Q L + LV+ PTR+LA+Q+
Sbjct: 75 IQAESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKPQPYF-GLVLAPTRELAVQI 133
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ A F A+ + + + VG
Sbjct: 134 SEA---------------------------------------FEALGSLISVRCAVIVGG 154
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I+VATPGRL+DH+ T+GF+L +L
Sbjct: 155 MDMISQSISLGKKPH---------------------IIVATPGRLLDHLENTKGFSLRNL 193
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DRLL + L +L++ LP RR
Sbjct: 194 KYLVMDEADRLLDLDFGPVLDKILKV---------------LPRE-------RRT----- 226
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SATL+ L + L +PL ++ +Y+ L + K
Sbjct: 227 -----------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKY 275
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L + I+FT +V T RL LL G I + G QS R L
Sbjct: 276 KDVYLVHILNEFPGQSTIIFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSARLGAL 332
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR GRTARAG+ GR ++
Sbjct: 333 GKFRSGSRNILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGRSGRAISI 392
Query: 478 LHKDEVKRFKKL 489
+ + EV+ ++++
Sbjct: 393 VTQYEVEIWQRI 404
>gi|221043088|dbj|BAH13221.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 221/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 179 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 233
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 234 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 275
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG + + EA
Sbjct: 276 SVTRQLAQF---------------------CNITTCLAVGGLDVKSQ----------EAA 304
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 305 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 353
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 354 MKEI----------------------------IRMCSHHRQ----------TMLFSATMT 375
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 376 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 435
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 436 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 492
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 493 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA- 551
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 552 --KAPVKARILPQDVILKFR 569
>gi|32425487|gb|AAH09304.2| DDX27 protein, partial [Homo sapiens]
Length = 769
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 215/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 201 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 255
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 256 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 288
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 289 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 315
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 316 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 361
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 362 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 397
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 398 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 457
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 458 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 514
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 515 NTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 571
Query: 511 LR 512
R
Sbjct: 572 FR 573
>gi|189342956|gb|ACD91989.1| DEAD box polypeptide 27 [Homo sapiens]
gi|313883628|gb|ADR83300.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 765
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 221/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 179 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 233
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 234 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 275
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG + + EA
Sbjct: 276 SVTRQLAQF---------------------CNITTCLAVGGLDVKSQ----------EAA 304
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 305 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 353
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 354 MKEI----------------------------IRMCSHHRQ----------TMLFSATMT 375
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 376 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 435
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 436 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 492
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 493 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA- 551
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 552 --KAPVKARILPQDVILKFR 569
>gi|297707298|ref|XP_002830447.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Pongo abelii]
Length = 765
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 221/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 179 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 233
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 234 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 275
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG + + EA
Sbjct: 276 SVTRQLAQF---------------------CNITTCLAVGGLDVKSQ----------EAA 304
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 305 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 353
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 354 MKEI----------------------------IRMCSHHRQ----------TMLFSATMT 375
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 376 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 435
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 436 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 492
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 493 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA- 551
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 552 --KAPVKARILPQDVILKFR 569
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 196/432 (45%), Gaps = 105/432 (24%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q++
Sbjct: 47 EAIPLALEGKDIIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQIS-- 103
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+ F A+ ++G+ + VG +
Sbjct: 104 -------------------------------------EQFEALGSSIGVKCAVIVGGMDM 126
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+ L K+P IL+ATPGRL+DH+ T+GF+L L +L
Sbjct: 127 MSQALILAKKP---------------------HILIATPGRLVDHLENTKGFSLRSLKFL 165
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR+L ++ + +L++
Sbjct: 166 VMDEADRILNMDFEVEVDKILRVI------------------------------------ 189
Query: 301 KPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 359
PR K +L SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K
Sbjct: 190 ---PRERKTLLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKFKD 245
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
+YLV +L L ++F ++ +T R LL + G + + G Q+ R L
Sbjct: 246 VYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTK 302
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T +
Sbjct: 303 FKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVT 362
Query: 480 KDEVKRFKKLLQ 491
+ +V+ ++++ Q
Sbjct: 363 QYDVELYQRIEQ 374
>gi|119596074|gb|EAW75668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_d [Homo
sapiens]
Length = 763
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 215/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 228 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 282
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 283 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 315
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 316 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 342
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 343 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 388
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 389 --------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIF 424
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 425 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 484
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 485 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 541
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 542 NTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 598
Query: 511 LR 512
R
Sbjct: 599 FR 600
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 203/460 (44%), Gaps = 107/460 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A ++G + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 63 ACTSLGYKAPTPIQA----ESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKP-QP 117
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA+Q++ + F
Sbjct: 118 YFGLVLAPTRELAVQISES---------------------------------------FE 138
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 139 ALGSLISVRCAVIVGGMDMISQSISLGKKPH---------------------IIVATPGR 177
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 178 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKV---------------LPR 222
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SATL+ L + L +PL ++ +Y+
Sbjct: 223 E-------RRT----------------YLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K K +YLV +L + I+FT +V T RL LL G I +
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 320 H---GQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHR 376
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
GRTARAG+ GR +++ + EV+ +++ ++ A P H
Sbjct: 377 VGRTARAGKSGRAISVVTQYEVEIWQR-IEAALGKQLPEH 415
>gi|40225538|gb|AAH11927.2| DDX27 protein, partial [Homo sapiens]
gi|48257213|gb|AAH16060.2| DDX27 protein, partial [Homo sapiens]
Length = 767
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 215/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 199 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 253
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 254 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 286
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 287 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 313
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 314 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 359
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 360 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 395
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 396 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 455
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 456 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 512
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 513 NTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 569
Query: 511 LR 512
R
Sbjct: 570 FR 571
>gi|344232268|gb|EGV64147.1| hypothetical protein CANTEDRAFT_122357 [Candida tenuis ATCC 10573]
Length = 563
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 214/502 (42%), Gaps = 110/502 (21%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER- 70
L W+ P+ P + D +K L G F VQV V + + +
Sbjct: 113 LDWLSKPIYSKPEHTWPFETFDLSDT-MKSNLATGGFIDAFSVQVTVLEMMLKDTKENKL 171
Query: 71 ------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
D+ +N+ TGSGKTL+Y++PI+++L R V +RA++++PT+ L
Sbjct: 172 KPDSNGDILVNASTGSGKTLAYSIPIIESLCTRVVPRVRAIILVPTKPL----------- 220
Query: 125 CCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEI 184
+ QVK ++ L V SI +E
Sbjct: 221 ----------------------------VSQVKQTLLQLSKGTSLYVMNLRNDISIREEA 252
Query: 185 SELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
+L P DI+V+TPGRL++H+ L L YLV+DE
Sbjct: 253 EKLTGNPP--------------------DIIVSTPGRLVEHVTGN-SIDLNSLRYLVIDE 291
Query: 245 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 304
DRLL +++Q W +++ + ++ + +K
Sbjct: 292 ADRLLGQSFQNWSRVLVERLEA-----------------------KQSSMVESWK----L 324
Query: 305 RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETR-----YKLPERLESYKL---ICES 355
R+ K+V SATLT D KLA L + P L + E + + P L + L +S
Sbjct: 325 RVQKLVFSATLTTDAGKLAMLHFYKPRLVIVNDEEKLVNEMFSTPRTLSEFTLQFSSNKS 384
Query: 356 KLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLL----NHFGELRIKIKEYSGLQRQ 410
LKPL L L++S +VFT S E++ RL LL + FG + S
Sbjct: 385 SLKPLILAKFLMKSNKLSNVLVFTKSNEASIRLSKLLSLVFDGFGVSMVVEYLNSTNNST 444
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
R K L AF G++ VLV +D + RG+DV + +VVNYD P + Y+HR GRTARA
Sbjct: 445 MARKKLLMAFDSGQVNVLVVTDLIARGIDVLSITDVVNYDMPNSSREYVHRVGRTARANN 504
Query: 471 LGRCFTLLH-KDEVKRFKKLLQ 491
GR + + K E++ +LL+
Sbjct: 505 DGRAYNFVFGKGEMRWMSRLLR 526
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R ALV+ PTR+
Sbjct: 48 PTKIQI--EAIPMALEGRDIIGLAETGSGKTGAFALPILNALLETPQRFF-ALVLTPTRE 104
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 105 LAFQIS---------------------------------------EQFEALGSSIGVECA 125
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 126 VIVGGIDSMSQSLALAKKP---------------------HVIIATPGRLIDHLENTKGF 164
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L+L D + TFL
Sbjct: 165 NLRALKYLVMDEADRILNMDFETEVDKILKLIPRDRK-------TFL------------- 204
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 205 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 245
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L +VF S+ +T R LL + G I + G Q+
Sbjct: 246 IPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 302
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 303 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 362
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ ++++
Sbjct: 363 KSITFVTQYDVELYQRI 379
>gi|440902879|gb|ELR53614.1| Putative ATP-dependent RNA helicase DDX27, partial [Bos grunniens
mutus]
Length = 741
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 217/482 (45%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 167 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 221
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF S+
Sbjct: 222 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTKQLAQFCSI------ 257
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ LAVG + + EA L++A DI
Sbjct: 258 ---------------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 281
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 282 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 327
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 328 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 363
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 364 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLG 423
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 424 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 480
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 481 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 537
Query: 511 LR 512
R
Sbjct: 538 FR 539
>gi|194224511|ref|XP_001501169.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Equus
caballus]
Length = 724
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 223/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 230 SQYDESLSFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICAC 279
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 280 AATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV---------------- 323
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF S+ AVG GL V A
Sbjct: 324 --HSVTKQLAQFCSI-------------TTCLAVG---GLDVKSQEAA------------ 353
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 354 --------------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 399
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + + IR C R M+ SA
Sbjct: 400 EEQMKEI----------------------------IRMCSHHRQ----------TMLFSA 421
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 422 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFT 481
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++
Sbjct: 482 DHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 538
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 539 DVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 598
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + +P +I R
Sbjct: 599 TA---KAPVKARILPQDVILKFR 618
>gi|109091647|ref|XP_001099400.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Macaca
mulatta]
gi|355563050|gb|EHH19612.1| Putative ATP-dependent RNA helicase DDX27 [Macaca mulatta]
gi|355784407|gb|EHH65258.1| Putative ATP-dependent RNA helicase DDX27 [Macaca fascicularis]
Length = 763
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 221/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 177 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 231
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 232 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 273
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG + + EA
Sbjct: 274 SVTRQLAQF---------------------CNITTCLAVGGLDVKSQ----------EAA 302
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 303 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 351
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 352 MKEI----------------------------IRMCSHHRQ----------TMLFSATMT 373
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 374 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 433
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 434 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 490
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 491 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA- 549
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 550 --KAPVKARILPQDVILKFR 567
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 201/448 (44%), Gaps = 107/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G S +Q+ E + L +D+ + TGSGKT ++ALPI+Q+L R
Sbjct: 52 ACDQLGWKSPTKIQI----EAVPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR- 106
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ + F
Sbjct: 107 LHTLVLTPTRELAFQIS---------------------------------------EQFE 127
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ ++G+ + VG + + L K+P I++ATPGR
Sbjct: 128 ALGSSIGVKCAVIVGGIDMMSQSLVLAKKPH---------------------IVIATPGR 166
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GFTL L +LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 167 LIDHLENTKGFTLRALKFLVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL-- 217
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT+T+ KL + L P+ T+Y
Sbjct: 218 -----------------------------FSATMTKKVQKLQRAALKDPVKCAVS-TKYS 247
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
++L+ Y + SK K YLV++L L I+F S+ + R+ LL + G I +
Sbjct: 248 TVDKLQQYYIFIPSKYKDCYLVSILNDLAGNSFIIFCSTCNNAQRVALLLRNLGITAISL 307
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G Q+ R L F+ VL+++D +RG+D+ V+ V+NYD P + K YIHR
Sbjct: 308 ---HGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHR 364
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G+ T + + +V+ F+++
Sbjct: 365 VGRTARAGRSGKSITFVTQYDVELFQRI 392
>gi|426241599|ref|XP_004014677.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Ovis aries]
Length = 765
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 223/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 179 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 233
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 234 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 275
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ + QF S+ + LAVG + + EA
Sbjct: 276 SVTKQLAQFCSI---------------------TTCLAVGGLDVKSQ----------EAA 304
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 305 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 353
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 354 MKEI----------------------------IRMCSHHRQ----------TMLFSATMT 375
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 376 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFTDHV 435
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 436 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 492
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A
Sbjct: 493 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA- 551
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 552 --KAPVKARILPQDVILKFR 569
>gi|224593278|ref|NP_060365.7| probable ATP-dependent RNA helicase DDX27 [Homo sapiens]
gi|29427946|sp|Q96GQ7.2|DDX27_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|116497013|gb|AAI26288.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|119596072|gb|EAW75666.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_b [Homo
sapiens]
gi|120660308|gb|AAI30276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|219519028|gb|AAI44126.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|313883552|gb|ADR83262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 796
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 215/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 228 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 282
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 283 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 315
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 316 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 342
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 343 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 388
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 389 --------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIF 424
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 425 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 484
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 485 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 541
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 542 NTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 598
Query: 511 LR 512
R
Sbjct: 599 FR 600
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 198/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPVALQGRDVIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQTT 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDTMSQSLALAKKPH---------------------VIIATPGRLVDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L +LV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G Q+
Sbjct: 245 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQNK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KSITFVTQYDVELFQRI 378
>gi|122692565|ref|NP_001073740.1| probable ATP-dependent RNA helicase DDX27 [Bos taurus]
gi|142980808|sp|A1A4H6.1|DDX27_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|119223998|gb|AAI26498.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Bos taurus]
gi|296481114|tpg|DAA23229.1| TPA: probable ATP-dependent RNA helicase DDX27 [Bos taurus]
Length = 765
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 217/482 (45%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 197 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 251
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF S+
Sbjct: 252 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTKQLAQFCSI------ 287
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ LAVG + + EA L++A DI
Sbjct: 288 ---------------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 311
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 312 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 357
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 358 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 393
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 394 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLG 453
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 454 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 510
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 511 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 567
Query: 511 LR 512
R
Sbjct: 568 FR 569
>gi|114682555|ref|XP_001166506.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 5 [Pan
troglodytes]
Length = 796
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 215/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 228 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 282
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 283 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 315
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 316 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 342
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 343 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 388
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 389 --------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIF 424
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 425 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 484
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 485 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 541
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 542 NTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 598
Query: 511 LR 512
R
Sbjct: 599 FR 600
>gi|355683275|gb|AER97071.1| DEAD box polypeptide 27 [Mustela putorius furo]
Length = 712
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 217/482 (45%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 196 PLLK-AITTMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 250
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R L+++PTR+L +QV HS+ + QF S+
Sbjct: 251 KPRQAPVTRVLILVPTRELGIQV------------------HSVTKQLAQFCSI------ 286
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ LAVG + + EA L++A DI
Sbjct: 287 ---------------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 310
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 311 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 356
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 357 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 392
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 393 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 452
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 453 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 509
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 510 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 566
Query: 511 LR 512
R
Sbjct: 567 FR 568
>gi|395506879|ref|XP_003757757.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Sarcophilus
harrisii]
Length = 766
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 216/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 202 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 256
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF ++
Sbjct: 257 KPRQAPITRVLVLVPTRELGIQV------------------HSVTKQLAQFSTV------ 292
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ LAVG + + EA + P DI
Sbjct: 293 ---------------TTCLAVGGLDVKSQ----------EAALRAGP-----------DI 316
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + ++QL
Sbjct: 317 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIQL----------- 365
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
C R M+ SAT+T + LA + L +P+ +
Sbjct: 366 -----------------CSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 398
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 399 VNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLTRTFTDHVMLFTQTKKQAHRMHILLG 458
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 459 LMG---LQVGELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 515
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 516 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKSA---KAPVKARILPQDVILK 572
Query: 511 LR 512
R
Sbjct: 573 FR 574
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TG GKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGPGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>gi|403282331|ref|XP_003932605.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Saimiri
boliviensis boliviensis]
Length = 765
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 213/479 (44%), Gaps = 111/479 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 179 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 233
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 234 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 275
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG G
Sbjct: 276 SVTRQLAQF---------------------CNITTCLAVG-------------------G 295
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
+ ++ L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 296 LDLKSQEAA--LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 353
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 354 MKEI----------------------------IRMCSHHR----------QTMLFSATMT 375
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 376 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 435
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 436 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 492
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 493 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA 551
>gi|334312364|ref|XP_001379053.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Monodelphis
domestica]
Length = 891
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 222/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 310 DASQYDENLTFQDMNLSRPLLK-AITTMGFKQPTPIQKAC----IPVGLLGKDICACAAT 364
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 365 GTGKTAAFALPVLERLIYKPRQAPITRVLVLVPTRELGIQV------------------H 406
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ + QF ++ + LAVG + + EA
Sbjct: 407 SVTKQLAQFSTV---------------------TTCLAVGGLDVKSQ----------EAA 435
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
+ P DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 436 LRAGP-----------DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 484
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ ++Q+ C R M+ SAT+T
Sbjct: 485 MKEIIQM----------------------------CSHHRQ----------TMLFSATMT 506
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 507 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLTRTFTDHV 566
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 567 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 623
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A
Sbjct: 624 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKSA- 682
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 683 --KAPVKARILPQDVILKFR 700
>gi|296200672|ref|XP_002747679.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Callithrix
jacchus]
Length = 764
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 214/479 (44%), Gaps = 111/479 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 178 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 232
Query: 79 GSGKTLSYALPIVQTLSNRAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L + R R LV++PTR+L +QV H
Sbjct: 233 GTGKTAAFALPVLERLIYKPRRGPVTRVLVLVPTRELGIQV------------------H 274
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG G
Sbjct: 275 SVTRQLAQF---------------------CNITTCLAVG-------------------G 294
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
+ ++V L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 295 LDVKSQEVA--LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 352
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 353 MKEI----------------------------IRMCSHHR----------QTMLFSATMT 374
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 375 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 434
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q R + L+ F++ +I +LV++D
Sbjct: 435 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQMQRLEALRRFKDEQIDILVATDVA 491
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 492 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA 550
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 198/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++ALPI+QTL ++ R L ALV+ PTR+LA Q+
Sbjct: 65 IQKEAIPVALQGSDVIGLAETGSGKTGAFALPILQTLLDKPQR-LYALVLTPTRELAFQI 123
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 124 S---------------------------------------EQFEALGASIGIKCAVIVGG 144
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 145 IDMMTQSLMLAKKPH---------------------IVIATPGRLVDHLENTKGFNLRSL 183
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L K I R ER
Sbjct: 184 KYLVMDEADRILNMDFEQEVDKIL-------------------------KAIPR---ERN 215
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
++ SAT+T+ KL + L +P+ + ++Y+ ++L+ Y L K
Sbjct: 216 ----------TLLFSATMTKKVAKLQRASLQNPVRVEVS-SKYQTVDKLQQYYLFIPVKF 264
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L +VF S+ +T R+ +L + G I + G QS R L
Sbjct: 265 KDVYLVYILNELAGNSFMVFCSTCANTQRVALMLRNLGLTAIPLH---GQMSQSKRLGAL 321
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+++D +RG+D+ V+ V+N D P + K YIHR GRTARAG+ G T
Sbjct: 322 NKFKSKNRSILIATDVASRGLDIPHVDVVLNLDIPTHSKDYIHRVGRTARAGRSGVAITF 381
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 382 VSQYDVELYQRI 393
>gi|320162646|gb|EFW39545.1| ATP-dependent RNA helicase DRS1 [Capsaspora owczarzaki ATCC 30864]
Length = 924
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 208/473 (43%), Gaps = 113/473 (23%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
ISSL F + TI P L RDL + TGSGKT ++ LP+++ L + R
Sbjct: 356 AISSLNFANATDIQAATIPPALMGRDLVACAKTGSGKTAAFLLPVLERLLYRQKTNPASR 415
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
LV+ PTR+LA+Q C H++ E +F
Sbjct: 416 VLVLSPTRELAVQ---------C---------HAMGEKLAKF------------------ 439
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
+ + L G S + +EL P D++VATPGRL+
Sbjct: 440 ---TDIRMSLICGGFSTKRQQAELRAHP---------------------DVIVATPGRLI 475
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ + GF LE + L++DE DRLL ++ + +
Sbjct: 476 DHLQNSPGFDLEGIEVLIMDEADRLLEMGFKEEVDEI----------------------- 512
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTG-ETRY 340
IR+C V R M+ SAT+T + L L ++ PL F+ +T
Sbjct: 513 -----IRQCSVSR----------QTMLFSATMTDEVENLIALSMNKPLRVFINKNTDTAT 557
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
L + + E + + + L +S K IVF S + HR + FG +K
Sbjct: 558 NLTQEFVRVRPQREKEKEAIVLAVCKRSF-HTKTIVFFRSKQGAHRAKVIFGLFG---LK 613
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E G Q R ++L+AF+EG++ L+++D +RG+D+ GV VVN D P + YIH
Sbjct: 614 AAELHGDLNQLQRLESLEAFKEGRVDFLLATDLASRGLDIVGVETVVNADMPNTLTQYIH 673
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI--HSIPSSLIESL 511
R GRTARAG+ GR +L+ + E K K++++ A + P+ SIPS +IE
Sbjct: 674 RVGRTARAGRAGRSLSLVCEGERKLLKEIVKHA---TVPLSSRSIPSDVIEKF 723
>gi|402591870|gb|EJW85799.1| DEAD/DEAH box helicase [Wuchereria bancrofti]
Length = 527
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 221/490 (45%), Gaps = 111/490 (22%)
Query: 25 EDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVW----QETIGPGLFE-RDLCINSPT 78
E C LD + L P L ++ + +PVQ V T +F RDL I+SPT
Sbjct: 68 ESCAELDFVKGLHPLLACRVREH-LKQWYPVQRTVLPYLVAATNAYSIFPPRDLVISSPT 126
Query: 79 GSGKTLSYALPIVQTLSN-RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
GSGKTL Y +PI+ L + CL ALVV+P ++L Q+ KY N+F +
Sbjct: 127 GSGKTLCYVIPILNALRGCIMMDCLFALVVVPVQNLVDQIEKEFKKY---NVFNV----R 179
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
I +C D L+V +R +LE+
Sbjct: 180 IVSLCGSHD----------------------LNV-----------------ERQQLESA- 199
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHINAT---RGFTLEHLCYLVVDETDRLLREAYQ 254
+I++AT GRLM+HIN FT HL YLVVDE DR+ A
Sbjct: 200 ---------------NIVIATAGRLMEHINDLDFPADFT--HLRYLVVDEADRMSHTARI 242
Query: 255 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
WL L+ + N N + + S L K++LSAT
Sbjct: 243 EWLND-LEAVANYNHNCVTIDDLYNASF-----------------------LQKILLSAT 278
Query: 315 LTQDPNKLAQLDLHHP-LF-------LTTGETRYK---LPERLESYKLICESKLKPLYLV 363
L+ D L + L HP LF + T E +P L+ +IC++K KPL
Sbjct: 279 LSLDVEDLHEWRLRHPCLFKAVKEDIVVTNELSLNSVIIPTSLKIECIICDTKFKPLVTH 338
Query: 364 ALLQSLGE-EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFRE 422
++ +K ++F +S +++RL LL + +++E S + R K L FR+
Sbjct: 339 ERIEGRKSWKKILIFVNSKIASYRLAVLLKMLSIGKYQVEELSSNLFGNRRQKVLARFRK 398
Query: 423 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 482
G +VL+SSD ++RG+DV+ ++ V+NYD+P K ++HR GRTAR G+ GR L+ E
Sbjct: 399 GTTRVLISSDVLSRGIDVKDIDVVINYDRPLNEKLFVHRVGRTARCGKKGRAIFLITAKE 458
Query: 483 VKRFKKLLQK 492
K F+ LQK
Sbjct: 459 KKDFQATLQK 468
>gi|344279740|ref|XP_003411645.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Loxodonta africana]
Length = 822
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 217/482 (45%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 254 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 308
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF S+
Sbjct: 309 KPRQAAVTRVLVLVPTRELGIQV------------------HSVTKQLAQFCSI------ 344
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ LAVG + + EA L++A DI
Sbjct: 345 ---------------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 368
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 369 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 414
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 415 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 450
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 451 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFSDHVMLFTQTKKQAHRMHILLG 510
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 511 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 567
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
+K Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 568 NTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKSA---KAPVKARILPQDVILK 624
Query: 511 LR 512
R
Sbjct: 625 FR 626
>gi|449486366|ref|XP_002191498.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Taeniopygia guttata]
Length = 757
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 225/504 (44%), Gaps = 122/504 (24%)
Query: 22 SLFEDCPL--DHLPCLD-----PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
S FED D+L D P LK A+ +G P+Q A I GL +D+C
Sbjct: 167 SFFEDASQYDDNLSFQDMNLSRPLLK-AITALGFKQPTPIQKAC----IPVGLLGKDICA 221
Query: 75 NSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+ TG+GKT ++ LP+++ L R R LV++PTR+L +QV
Sbjct: 222 CAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQV--------------- 266
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 192
HS+ + QF ++ AVG GL V A
Sbjct: 267 ---HSVTKQLAQFSNV-------------TTCLAVG---GLDVKTQEAA----------- 296
Query: 193 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 252
L+S DIL+ATPGRL+DH++ F L + L++DE DR+L E
Sbjct: 297 ---------------LRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEY 341
Query: 253 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 312
++ + +++L C R M+ S
Sbjct: 342 FEEQMKEIIRL----------------------------CSHHRQ----------TMLFS 363
Query: 313 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLG 370
AT+T++ LA + L +P+ + P + + I ++ + + ALL
Sbjct: 364 ATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVTALLTRTF 423
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 430
++ ++FT + + HR+ LL G +++ E G Q+ R ++L+ F++ +I +LV+
Sbjct: 424 QDHVMLFTQTKKQAHRMHILLGLMG---LRVGELHGNLSQTQRLESLRRFKDEQIDILVA 480
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+D RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K+++
Sbjct: 481 TDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIV 540
Query: 491 QKADNDSCPIHS--IPSSLIESLR 512
+ A P+ + +P +I R
Sbjct: 541 KTA---KTPVKARILPQDVILKFR 561
>gi|170579262|ref|XP_001894751.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158598525|gb|EDP36400.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 527
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 222/489 (45%), Gaps = 111/489 (22%)
Query: 25 EDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP----GLFE-RDLCINSPT 78
E C LD + L P L ++ + +PVQ V + +F RDL I+SPT
Sbjct: 68 ESCAELDFVKGLHPLLACRVREH-LRQWYPVQRTVLPHLVAATNTCSIFPPRDLVISSPT 126
Query: 79 GSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
GSGKTL Y +PI+ L + + CL AL+V+P ++L Q+ KY N+F
Sbjct: 127 GSGKTLCYVIPILNALRACTMMDCLFALIVVPVQNLVDQIEKEFKKY---NVFN------ 177
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
+C+ +SL DV ++R +LE+
Sbjct: 178 ---VCI-------VSLCGSHDVN---------------------------VERQQLESA- 199
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHI---NATRGFTLEHLCYLVVDETDRLLREAYQ 254
+I++ATPGRLM+HI + FT HL YLVVDE DR+ A
Sbjct: 200 ---------------NIVIATPGRLMEHITDLDFPADFT--HLRYLVVDEADRMSHTARI 242
Query: 255 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
WL L+ + N N + + S L K++LSAT
Sbjct: 243 EWLNN-LEAAANYNHNCVTIDDLYNASF-----------------------LQKILLSAT 278
Query: 315 LTQDPNKLAQLDLHHP-LF-------LTTGETRYK---LPERLESYKLICESKLKPLYLV 363
L+ D L + L HP LF + T E +P L+ ++C++K KPL
Sbjct: 279 LSLDVEDLHEWRLRHPCLFKAVKEDVVVTNELSLNSVIIPNSLKIEYIVCDTKFKPLVTH 338
Query: 364 ALLQSLGE-EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFRE 422
++ +K ++F +S +++RL LL + +++E S + R K L FR+
Sbjct: 339 ERIEGRKSWKKILIFVNSKLASYRLAVLLKMLSVGKYQVEELSSNLFGNRRQKVLARFRK 398
Query: 423 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 482
G +VL+SSD ++RG+DV ++ V+NYD+P K ++HR GRTAR G+ GR L+ E
Sbjct: 399 GTTRVLISSDVLSRGIDVMDIDVVINYDRPLNEKLFVHRVGRTARCGKKGRAIFLITAKE 458
Query: 483 VKRFKKLLQ 491
K F+ LQ
Sbjct: 459 KKDFQATLQ 467
>gi|242007312|ref|XP_002424485.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212507903|gb|EEB11747.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 669
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 205/458 (44%), Gaps = 110/458 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---A 98
A+ M S P+Q A I L RD+C + TG+GKT +Y LPI++ L + +
Sbjct: 169 AIAAMNFSHPTPIQCAA----IPVALLGRDICGCAATGTGKTAAYMLPILERLLYKPQGS 224
Query: 99 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
+ R LV++PTR+L +QV +A+ +F ++
Sbjct: 225 LSITRVLVLVPTRELGVQV------------------IQVAKQLSKFTTI---------- 256
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
+GLAVG + + + L K+P DI++AT
Sbjct: 257 -----------EIGLAVGGLDVKVQEAFLRKQP---------------------DIVIAT 284
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL+DH+ + GF+L+ + LV+DE DR+L E + + +
Sbjct: 285 PGRLIDHLKNSLGFSLDSIEILVLDEADRMLDEYFAEQMKEI------------------ 326
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
+R+C R M+ SAT+T LA + L +P+ +
Sbjct: 327 ----------VRQCSRTRQ----------TMLFSATMTTAVEDLASVSLSNPVKIFVDSN 366
Query: 339 RYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ + + I + + K L AL++ CI+F ++ H+L LL G
Sbjct: 367 QSVTNNLRQEFIRIRKGREGDKEAVLAALVRRTFRANCIIFVATKSQAHKLRILL---GF 423
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L +K E G RQ R TLK F+ G++ +LV++D RG+D+ GV V+NYD P +
Sbjct: 424 LNMKAGELHGNLRQPERLDTLKRFKNGELDILVATDVAARGLDISGVKTVINYDLPMTFE 483
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
YIHR GRTARAG+ G +L + E K K++++KA+
Sbjct: 484 HYIHRVGRTARAGRSGISVSLACESERKLVKEIVKKAE 521
>gi|164660112|ref|XP_001731179.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
gi|159105079|gb|EDP43965.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
Length = 638
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 218/483 (45%), Gaps = 119/483 (24%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC---- 101
G+++L F + TI L +D+ + TGSGKT ++ +PI++ LS R
Sbjct: 91 GLAALNFSRPTPIQARTIPIALAGKDIVAGAVTGSGKTAAFLIPIMERLSYRQRSADDAK 150
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
R +V+ PTR+LA+Q C HS+A+ +F ++ F
Sbjct: 151 SRVVVLCPTRELAIQ---------C---------HSVAQALGKFMNVRFC---------- 182
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
L VG S+ + +EL RP D+++ATPGR
Sbjct: 183 -----------LCVGGLSLKLQEAELKTRP---------------------DVIIATPGR 210
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ + F +E + LV+DE DR+L + ++ L +++L
Sbjct: 211 LIDHVRNSASFGMEDVEILVMDEADRMLEDGFEDELNEIVRL------------------ 252
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LF------- 332
C +R M+ SAT+T+D ++L +L L P LF
Sbjct: 253 ----------CPKQRQ----------TMLFSATMTEDVDQLVRLSLRTPVRLFVDPKRST 292
Query: 333 ---LTTGETRYKLPERLESY-KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 388
LT R + RL + + E + + LV L ++ I+F S + H+L
Sbjct: 293 ASKLTQEFVRVRAQSRLTGHARQQAEDQHRAAILVTLCMRTFRDQVIIFVRSKKLAHQLK 352
Query: 389 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 448
L FG L + E G Q R ++L FR+GK+ L+++D +RG+D+ GV V+N
Sbjct: 353 IL---FGLLGLSAAELHGDLSQEQRLQSLSLFRDGKVDFLLATDLASRGIDIRGVQTVIN 409
Query: 449 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 508
YD PA ++ Y+HR GRTARAG+ GR TL+ + + + K +L++ + +PS ++
Sbjct: 410 YDMPAQLEPYLHRVGRTARAGRQGRAVTLVGEPDRRLLKTVLKRTPPEQVKHRLMPSEMV 469
Query: 509 ESL 511
+ L
Sbjct: 470 QKL 472
>gi|226288804|gb|EEH44316.1| ATP-dependent rRNA helicase RRP3 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 189/437 (43%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q E I L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 70 ACEALGYKTPTPIQT----EAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QS 124
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ A F
Sbjct: 125 LFGLVLAPTRELAYQISEA---------------------------------------FE 145
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 146 ALGSLISVRCAVIVGGMDMVPQAIALGKKPH---------------------IIVATPGR 184
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ LP
Sbjct: 185 LLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 229
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ ++Y+
Sbjct: 230 E-------RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSSKYQ 266
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + I+FT +V T RL LL G I +
Sbjct: 267 TVSTLLQTFLFIPHKYKDIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGAIPL 326
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTYIHR
Sbjct: 327 H---GQLSQSYRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHR 383
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G F+ +
Sbjct: 384 VGRTARAGKSGHAFSFV 400
>gi|60416850|emb|CAI59782.1| hypothetical protein [Homo sapiens]
Length = 268
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 131/230 (56%), Gaps = 17/230 (7%)
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ETRYKLPERLE 347
P L K++ SATLTQ+P KL QL LH P +TG +Y P L
Sbjct: 22 PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLT 81
Query: 348 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+ + C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S
Sbjct: 82 HHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSR 139
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH-RAGRTA 466
R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+H R GRTA
Sbjct: 140 YGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRRVGRTA 199
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
RAG+ G+ FTLL K + +R ++L +A H + S L++ L P Y+
Sbjct: 200 RAGKTGQAFTLLLKVQERRLLRMLTEAGAPELQRHELSSKLLQPLVPRYE 249
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 198/434 (45%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ QE I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 44 IQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 102
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ QFD A+ ++G+ + VG
Sbjct: 103 SE------------------------QFD---------------ALGSSIGVKTVVLVGG 123
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 124 MDMHAQGMILEKKPH---------------------IIIATPGRLVDHLENTKGFNLRQL 162
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 163 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 195
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 196 -----------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKF 243
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F + +T R LL + G + + G Q+ R L
Sbjct: 244 KDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPL---HGQMTQNKRIAAL 300
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 301 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 360
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 361 VTQYDVELYQRIEQ 374
>gi|281351106|gb|EFB26690.1| hypothetical protein PANDA_000812 [Ailuropoda melanoleuca]
Length = 703
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 216/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 165 PLLK-AITVMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 219
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF
Sbjct: 220 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTKQLAQF--------- 252
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 253 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 279
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 280 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 325
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 326 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 361
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 362 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 421
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 422 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 478
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 479 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 535
Query: 511 LR 512
R
Sbjct: 536 FR 537
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 207/461 (44%), Gaps = 110/461 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A+Q+M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 72 LIPELLEAIQSMKFTKPTPIQA----EAIPHALEGKDVIGLAVTGSGKTAAFAIPILQSL 127
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + LV+ PTR+LA Q+
Sbjct: 128 WHDQL-PYYCLVLSPTRELAYQI------------------------------------- 149
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
KD F A+ +GL VG + D+ +L+++P +
Sbjct: 150 --KDTFDALGSGMGLRACCIVGGMDMMDQARDLMRKPH---------------------V 186
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGR++DH+ T+GF+L++L YLV+DE DRLL + L +L++ +
Sbjct: 187 IVATPGRIVDHLEHTKGFSLKNLKYLVMDEADRLLDLDFGPELDKILRVIPRER------ 240
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + L++P+ +
Sbjct: 241 -NTYL-------------------------------FSATMTNKIEKLQRASLNNPVRIA 268
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
++Y+ + L ++ K YLV LL + I+FT + + R L
Sbjct: 269 VS-SKYQTADNLVQSMMLVSDGYKNTYLVHLLNEFVGKSIIIFTRTCAHSQRTALLARIL 327
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G QS R +L F+ GK +LV++D RG+D+ V+ V+NYD P
Sbjct: 328 GFSAVPLH---GQLSQSQRLGSLNKFKSGKANILVATDVAARGLDIPAVDVVINYDIPTD 384
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQK 492
K YIHR GRTARAG+ G+ +L+ + +++ R + +LQK
Sbjct: 385 SKAYIHRVGRTARAGRSGKSISLVTQYDLEMYLRIEAVLQK 425
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 214/477 (44%), Gaps = 118/477 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
AL MG+ P+Q A + L +D+ + TGSGKT ++ +PI++ L R
Sbjct: 200 ALTTMGLHKPTPIQAAA----VPVALLGKDVVGGAVTGSGKTAAFTIPIIERLLYRDKGK 255
Query: 98 ---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A RCL VV+PTR+LA+Q C + +A H+ C
Sbjct: 256 NAAATRCL---VVVPTRELAVQ---------CFEVGTRMAGHTDVRFC------------ 291
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
L VG S+ + + L RP D+
Sbjct: 292 ------------------LVVGGLSLKSQEAALRSRP---------------------DV 312
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ + FTL+ L LV+DE DR+L E+ F+D
Sbjct: 313 LIATPGRLIDHLHNSPSFTLDALDILVLDEADRML-------------------EDGFAD 353
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T + ++ C V R M+ SAT+T +KL +L L P+ +
Sbjct: 354 ELTEI---------VKACPVSR----------QTMLFSATMTDSVDKLIRLSLTKPVRIF 394
Query: 335 TGETRYKLPERLESYKLICESKLK--PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
R ++ + + K K P L+ + + + + IVF S + H++ +
Sbjct: 395 VDAKRSMAKGLVQEFVRVRPEKEKERPALLLCICKRTFKTRVIVFFRSKKLAHQMRIV-- 452
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
FG L +K E G Q R K L+AFR+G + L+++D +RG+D++G+ V+N+D P
Sbjct: 453 -FGLLDMKCDELHGDLSQEQRLKALQAFRDGSVDYLMATDLASRGLDIKGIETVINFDMP 511
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ-KADNDSCPIHSIPSSLI 508
+ + Y+HR GRTARAG+ GR T + + + K + +++ A DS +P+ ++
Sbjct: 512 SQLAQYLHRVGRTARAGKTGRSVTFVGEADRKMLRAVVKHSAGEDSVRHRVVPADVV 568
>gi|123504635|ref|XP_001328793.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121911741|gb|EAY16570.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 515
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 217/497 (43%), Gaps = 116/497 (23%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P DV FE+ L H + AL M F + V +TI L RD+C ++
Sbjct: 12 PNDVESFEELGLSH------SIIRALHKMN----FEIPTPVQNKTIPIALQGRDVCASAV 61
Query: 78 TGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIAD 135
TGSGKT ++ +P V+ L S RA+++ PTR+LA Q
Sbjct: 62 TGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQT------------------ 103
Query: 136 HSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 195
+S+ +QF L ++ L G S++ +E L++ P
Sbjct: 104 YSVLSQIIQFTPLT--------------------ALLLTGGSSNVKEEEERLLEYP---- 139
Query: 196 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 255
D LV TPGR++DHI GFTLE++ LV+DE+DRLL+E + +
Sbjct: 140 -----------------DFLVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLLQEGFYS 182
Query: 256 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SAT 314
+ V K P + +L +AT
Sbjct: 183 QIEEV---------------------------------------HKSLPETTQSILVTAT 203
Query: 315 LTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 374
+ ++LA++ L P+ + + +K+ + L + C + + LVA L +K
Sbjct: 204 MNSSVSRLAEMSLKKPVRIDLDDV-FKVAKGLTQEFIRCTKETRDATLVACCSRLCTKKT 262
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++F ++ + H L L G + + E G Q R + F G+ + L+++D
Sbjct: 263 LIFGNTKKIVHNLYLLFKALG---MPVAELQGDMTQLKRYEAHSLFAGGQAEFLIATDVA 319
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK-A 493
RG+D++G+ NV+NY+ P + Y+HR GRTAR GR L+ +D+ + K +++K A
Sbjct: 320 ARGLDIKGIENVINYNMPRSLTFYVHRVGRTARINTEGRTIALITEDDREMMKSIIEKSA 379
Query: 494 DNDSCPIHSIPSSLIES 510
+++ +IP ++IE+
Sbjct: 380 ESNPVSKRTIPDNVIEA 396
>gi|407918962|gb|EKG12222.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 523
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 218/464 (46%), Gaps = 109/464 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L + + A+Q MG +++ VQ ++ I P L RD+ + TGSGKTL++ +P+V+ L
Sbjct: 116 LSDKTQKAIQEMGFTTMTEVQ----KKAIPPLLAGRDVLGAAKTGSGKTLAFLIPVVEML 171
Query: 95 SN---RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
+ + A+V+ PTR+LALQ IFG +A ++ + F
Sbjct: 172 HSLRFKPRNGTGAIVISPTRELALQ------------IFG------VARELMEHHTQTF- 212
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
G+ +G G + A++I KLE G
Sbjct: 213 ----------------GIVMG---GANRKAEQI-------KLEKG--------------- 231
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
V++L+ATPGRL+DH+ T GF ++L LV+DE DR+L ++ L ++++ + ++ +
Sbjct: 232 VNLLIATPGRLLDHLQNTPGFVFKNLRTLVLDEADRILEVGFEDELKAIVKILGNPDQRQ 291
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HP 330
+ + SAT T LA++ L P
Sbjct: 292 TA------------------------------------LFSATQTTKVEDLARISLKPGP 315
Query: 331 LFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
LF++ + + + LE ++CES L+ L L+ ++K IVFTSS S L +
Sbjct: 316 LFISVDHYKEHSTADSLELGYVVCESDLRFRLLFTFLKKHQKKKIIVFTSSCASVEYLTS 375
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
LLN+ + + + SG +Q R+ T F + VL+++D RG+D+ V+ V+
Sbjct: 376 LLNY---IDLPVLGLSGKMKQQKRTATFFEFANSQHGVLIATDVAARGLDIPAVDWVIQL 432
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
D P +++IHRAGRT RAG+ GRC +L EV F + LQ+A
Sbjct: 433 DPPDDARSFIHRAGRTGRAGKSGRCLLVLQPSEVA-FTRHLQEA 475
>gi|301754403|ref|XP_002913034.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Ailuropoda melanoleuca]
Length = 764
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 216/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 196 PLLK-AITVMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 250
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF
Sbjct: 251 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTKQLAQF--------- 283
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 284 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 310
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 311 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 356
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 357 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 392
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 393 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 452
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 453 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 509
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 510 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 566
Query: 511 LR 512
R
Sbjct: 567 FR 568
>gi|410953778|ref|XP_003983547.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Felis catus]
Length = 920
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 216/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 351 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 405
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF
Sbjct: 406 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTKQLAQF--------- 438
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 439 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 465
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 466 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 511
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 512 --------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIF 547
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 548 VNSNTDVAPFLRQEFVRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 607
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 608 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 664
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 665 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 721
Query: 511 LR 512
R
Sbjct: 722 FR 723
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 201/448 (44%), Gaps = 107/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G S +Q+ E I L +D+ + TGSGKT ++ALPI+Q+L R
Sbjct: 51 ACDQLGWKSPTKIQI----EAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR- 105
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ + F
Sbjct: 106 LHTLVLTPTRELAFQIS---------------------------------------EQFE 126
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ ++G+ + VG + + L K+P +++ATPGR
Sbjct: 127 ALGSSIGVKCAVIVGGIDMMSQSLVLAKKPH---------------------VVIATPGR 165
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L +LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 166 LIDHLENTKGFSLRALKFLVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL-- 216
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT+T+ KL + L P+ T+Y
Sbjct: 217 -----------------------------FSATMTKKVQKLERAALKDPVKCAVS-TKYS 246
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
++L+ Y + SK K YLV++L L I+F S+ + R+ LL + G I +
Sbjct: 247 TVDKLQQYYIFIPSKYKDCYLVSILNELAGNSFIIFCSTCNTAQRVALLLRNLGITAIPL 306
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G Q+ R L F+ VL+++D +RG+D+ V+ V+NYD P + K YIHR
Sbjct: 307 H---GQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHR 363
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G+ T + + +V+ F+++
Sbjct: 364 VGRTARAGRSGKSITFVTQYDVELFQRI 391
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 199/434 (45%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ QE I L +D+ + TGSGKT ++ALPI+Q L + R AL++ PTR+LA Q+
Sbjct: 21 IQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLEQPQRYF-ALILTPTRELAFQI 79
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ QFD A+ ++G+ + VG
Sbjct: 80 SE------------------------QFD---------------ALGSSMGVKTVVLVGG 100
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 101 MDMHAQGMILEKKPH---------------------IIIATPGRLVDHLENTKGFNLRQL 139
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 140 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 172
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 173 -----------LLFSATMTKKVQKLQRASLRNPVRVEVS-TKYQTVEKLQQYYIFIPVKF 220
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F + +T R LL + G + + G Q+ R L
Sbjct: 221 KDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAAL 277
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 278 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 337
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 338 VTQYDVELYQRIEQ 351
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 198/452 (43%), Gaps = 107/452 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A++ + + P+Q I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 71 LVPELMEAIEKLKYTKPTPIQSGA----IPHALEGKDIIGLAQTGSGKTAAFAIPILQSL 126
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A R ALV+ PTR+LA Q+
Sbjct: 127 WE-AQRPYYALVLAPTRELAYQI------------------------------------- 148
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
K+ F A+ +G+ VG + D+ +L+++P I
Sbjct: 149 --KETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPH---------------------I 185
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
LVATPGR+MDH+ T+GF+L+ L YLV+DE DRLL + L +L++ +
Sbjct: 186 LVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILKVIPTKR------ 239
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + LH P+ +
Sbjct: 240 -TTYL-------------------------------FSATMTNKIAKLQRASLHEPVKVA 267
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ K +L+ LL + IVFT + T R L
Sbjct: 268 VS-NKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFTRTCAHTQRSTLLARIL 326
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G QS R +L F+ GK +L+++D RG+D+ V+ V+NYD P
Sbjct: 327 GFSAVPL---HGQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTD 383
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
K YIHR GRTARAG+ G+ +L+ + +++ +
Sbjct: 384 SKAYIHRVGRTARAGKSGKSISLVTQYDLEMY 415
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 196/431 (45%), Gaps = 103/431 (23%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q++
Sbjct: 47 EAIPLTLEGKDVIGLAETGSGKTAAFAIPILQALLENPQRYF-ALILTPTRELAFQIS-- 103
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+ F A+ ++G+ + VG +
Sbjct: 104 -------------------------------------EQFEALGSSIGVKCAVIVGGMDM 126
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+ L K+P IL+ATPGRL+DH+ T+GF L L +L
Sbjct: 127 MSQALLLAKKPH---------------------ILIATPGRLVDHLENTKGFNLRSLKFL 165
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR+L ++ + +L++ +P RR
Sbjct: 166 VMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT-------- 195
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 360
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K +
Sbjct: 196 --------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKFKDV 246
Query: 361 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 420
YLV +L L ++F ++ +T R LL + G + + G Q+ R L F
Sbjct: 247 YLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTKF 303
Query: 421 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T + +
Sbjct: 304 KAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQ 363
Query: 481 DEVKRFKKLLQ 491
+V+ ++++ Q
Sbjct: 364 YDVELYQRIEQ 374
>gi|10434683|dbj|BAB14343.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 214/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 197 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 251
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 252 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 284
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 285 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 311
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 312 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 357
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 358 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 393
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 394 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 453
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 454 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 510
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 511 NTIKHYDHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 567
Query: 511 LR 512
R
Sbjct: 568 FR 569
>gi|73992237|ref|XP_534451.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Canis lupus familiaris]
Length = 765
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 216/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 195 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 249
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF
Sbjct: 250 KPRQSPVTRVLVLVPTRELGIQV------------------HSVTKQLAQF--------- 282
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 283 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 309
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 310 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 355
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 356 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 391
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 392 VNSNTDVAPFLRQEFVRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 451
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 452 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 508
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 509 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 565
Query: 511 LR 512
R
Sbjct: 566 FR 567
>gi|19114747|ref|NP_593835.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654514|sp|Q9P6N8.1|RRP3_SCHPO RecName: Full=ATP-dependent rRNA helicase rrp3
gi|7708606|emb|CAB90153.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe]
Length = 465
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 195/448 (43%), Gaps = 107/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q QE I L +RD+ + TGSGKT ++ALP++Q L N
Sbjct: 60 ACEKLGFKTPTPIQ----QEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPF 115
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
A+V+ PTR+LA Q++ + F
Sbjct: 116 F-AVVLAPTRELAYQIS---------------------------------------EQFE 135
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
AI ++G+ + VG + + L K+P +LV TPGR
Sbjct: 136 AIGGSIGVRSVVIVGGMDMVTQAVALSKKPH---------------------VLVCTPGR 174
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
LMDH+ T+GF+L++L YL++DE DRLL + + +L++
Sbjct: 175 LMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKII----------------- 217
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
P+ R ++ SAT+T KL + LH P+ + +++
Sbjct: 218 --------------------PHERRT-LLFSATMTSKVEKLQRASLHQPVRVAVS-SKFS 255
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L L K K YLV L+ L I+F +V T RL LL G I +
Sbjct: 256 TVDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPL 315
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L F+ G LV++D RG+D+ V+ V+NYD P K YIHR
Sbjct: 316 ---HGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHR 372
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G+ L+ + +++ F ++
Sbjct: 373 VGRTARAGRAGKSIALVTQYDLEPFLRI 400
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 103/431 (23%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q++
Sbjct: 52 EAIPLTLEGKDIIGLAETGSGKTAAFAIPILQALLENPQRYF-ALILTPTRELAFQISEQ 110
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
F A+ ++G+ + VG +
Sbjct: 111 ---------------------------------------FEALGSSIGVKCAVIVGGMDM 131
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+ L K+P IL+ATPGRL+DH+ T+GF L L +L
Sbjct: 132 MSQALLLAKKPH---------------------ILIATPGRLVDHLENTKGFNLRSLKFL 170
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR+L ++ + +L++ +P RR
Sbjct: 171 VMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT-------- 200
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 360
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K K +
Sbjct: 201 --------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYVFIPVKFKDV 251
Query: 361 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 420
YLV +L L ++F ++ +T R LL + G + + G Q+ R L F
Sbjct: 252 YLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAALTKF 308
Query: 421 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T + +
Sbjct: 309 KAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQ 368
Query: 481 DEVKRFKKLLQ 491
+V+ ++++ Q
Sbjct: 369 YDVELYQRIEQ 379
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 195/434 (44%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q+L R AL++ PTR+LA Q+
Sbjct: 45 IQKEAIPVALQGKDVIGLAETGSGKTAAFALPILQSLLENPQRYF-ALILTPTRELAFQI 103
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + A+ +G+ + VG
Sbjct: 104 S---------------------------------------EQIEALGANIGVKCAVIVGG 124
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P IL+ATPGRL+DH+ T+GF L+ L
Sbjct: 125 MDMMSQALILAKKPH---------------------ILIATPGRLLDHLENTKGFNLKAL 163
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 164 KYLVMDEADRILNMDFEVEVDKILKVIPRERH-------TFL------------------ 198
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + T+Y+ E+L+ Y + K
Sbjct: 199 -------------FSATMTKKVKKLQRACLRDPVKVEVS-TKYQTVEKLQQYYIFIPVKF 244
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L + ++F S+ +T R LL + G + + G Q+ R L
Sbjct: 245 KDVYLVHILNEMAGNSFMIFCSTCNNTIRTALLLRNLGLTAVPL---HGQMSQNKRLAAL 301
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 302 TKFKAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 361
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 362 VTQYDVELYQRIEQ 375
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 201/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++A+P++Q+L A R L LV+ PTR+
Sbjct: 102 PTKIQI--EAIPVALQGRDVIGLAETGSGKTGAFAVPVLQSLLACAQR-LHTLVLTPTRE 158
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q IAE QFD A+ ++G+
Sbjct: 159 LAFQ---------------------IAE---QFD---------------ALGSSIGVKTA 179
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 180 VIVGGIDMMSQALVLAKKPH---------------------VVIATPGRLIDHMENTKGF 218
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L +++ + +L++ D TFL
Sbjct: 219 NLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRR-------TFL------------- 258
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L P+ + ++Y ++L+ + +
Sbjct: 259 ------------------FSATMTKKVQKLQRAALQDPVKCSVS-SKYATVDKLQQFYIF 299
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV++L L +VF + +T R+ LL + G I + G Q+
Sbjct: 300 IPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLH---GQMSQNK 356
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L F+ VL+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G
Sbjct: 357 RLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSG 416
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 417 KSITFVTQYDVELFQRI 433
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 193/444 (43%), Gaps = 107/444 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A++ + + P+Q I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 71 LVPELMEAIEKLKYTKPTPIQSGA----IPHALEGKDIIGLAQTGSGKTAAFAIPILQSL 126
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A R ALV+ PTR+LA Q+
Sbjct: 127 WE-AQRPYYALVLAPTRELAYQI------------------------------------- 148
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
K+ F A+ +G+ VG + D+ +L+++P I
Sbjct: 149 --KETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPH---------------------I 185
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
LVATPGR+MDH+ T+GF+L+ L YLV+DE DRLL + L +L++ +
Sbjct: 186 LVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILKVIPTKR------ 239
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + LH P+ +
Sbjct: 240 -TTYL-------------------------------FSATMTNKIAKLQRASLHEPVKVA 267
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ K +L+ LL + IVFT + T R L
Sbjct: 268 VS-NKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFTRTCAHTQRSTLLARIL 326
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G QS R +L F+ GK +L+++D RG+D+ V+ V+NYD P
Sbjct: 327 GFSAVPL---HGQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTD 383
Query: 455 IKTYIHRAGRTARAGQLGRCFTLL 478
K YIHR GRTARAG+ G+ +L+
Sbjct: 384 SKAYIHRVGRTARAGKSGKSISLV 407
>gi|13384106|gb|AAK21271.1| RNA helicase-like protein [Homo sapiens]
Length = 561
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 209/473 (44%), Gaps = 114/473 (24%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L R R
Sbjct: 1 MGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTR 56
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
LV++PTR+L +QV HS+ QF
Sbjct: 57 VLVLVPTRELGIQV------------------HSVTRQLAQF------------------ 80
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
++ LAVG + + EA L++A DIL+ATPGRL+
Sbjct: 81 ---CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDILIATPGRLI 116
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH++ F L + L++DE DR+L E ++ + +
Sbjct: 117 DHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI----------------------- 153
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 343
IR C R M+ SAT+T + LA + L +P+ + P
Sbjct: 154 -----IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 198
Query: 344 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ + I ++ + + ALL + ++FT + + HR+ L G +++
Sbjct: 199 FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHIFLGLMG---LQV 255
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P IK Y+HR
Sbjct: 256 GELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHR 315
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I R
Sbjct: 316 VGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILKFR 365
>gi|15422163|gb|AAK95821.1| RNA helicase-like protein [Homo sapiens]
Length = 796
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 214/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 228 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 282
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 283 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 315
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 316 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 342
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 343 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 388
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 389 --------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIF 424
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 425 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 484
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 485 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 541
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 542 NTIKHYDHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 598
Query: 511 LR 512
R
Sbjct: 599 FR 600
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 215/465 (46%), Gaps = 113/465 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+Q +G S P+Q +TI L +D+ ++ TGSGKT ++ LPI++ L
Sbjct: 192 PLLK-AVQKLGFSQPTPIQA----KTIPLALNGKDILASASTGSGKTAAFLLPILERLLF 246
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ R +R LV+LPTR+LALQ C+++ +A S C
Sbjct: 247 RDSEYRAIRVLVLLPTRELALQ---------CQSVLENLAQFSNITSC------------ 285
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
L VG G S+ A E+ EL KRP D+
Sbjct: 286 --------------LIVG---GLSNKAQEV-ELRKRP---------------------DV 306
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH+ G LE L L++DE DRLL ++ D N+ D
Sbjct: 307 VIATPGRLIDHLLNAHGIGLEDLEILILDEADRLLDMGFK------------DEINKIVD 354
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+ C P R M+ SATL + LA+L L P+ +
Sbjct: 355 S----------------C---------PTSRQT-MLFSATLNDEVKTLAKLSLQQPIRVQ 388
Query: 335 TGETRYKLPERLESYKLICESKL---KPLYLVAL-LQSLGEEKCIVFTSSVESTHRLCTL 390
+ +++ L+ + +S+ +P L++L + I+F S + HRLC +
Sbjct: 389 V-DALFQVASTLDQEFVKIKSQHLSDRPAILMSLCTRVFNTGGTIIFCRSKKEVHRLCII 447
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
FG +K E G Q R +L+ FR+GK+ L++SD +RG+D+ GV V+NY+
Sbjct: 448 ---FGLSDLKAAELHGNLSQEQRFDSLQQFRDGKVNYLLASDVASRGLDIIGVKTVINYN 504
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
P + YIHR GRTARAG G+ + + +++ K K+++ KA N
Sbjct: 505 MPNTLAQYIHRVGRTARAGMEGKSCSFITENDRKILKEIVTKARN 549
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 193/438 (44%), Gaps = 104/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
FP + +++I L +RD+ + TGSGKT ++ALPI+Q L ++ + L LV+ PTR
Sbjct: 79 FPT--PIQEKSIPIALQDRDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLVLAPTR 135
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ A F A+ ++ L
Sbjct: 136 ELAHQIGQA---------------------------------------FEALGSSISLRC 156
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 157 AVIVGGLDMVPQAVALGKKPH---------------------IIVATPGRLVDHLEKTKG 195
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 196 FSLRTLKYLVMDEADRLLDMDFGPAIDKLLK---------------FIPRE-------RR 233
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SATL+ L + L P+ ++ +Y+ L L
Sbjct: 234 T----------------YLFSATLSSKVESLQRASLRDPVRVSVSSNKYQTVSTLLQNLL 277
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
+ K K YL+ L+ + IVFT +V T R+ LL G I + G QS
Sbjct: 278 VVPQKRKDTYLIYLVNEFTGKSTIVFTRTVWETQRIAILLRTLGFGAIPL---HGQLSQS 334
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+
Sbjct: 335 ARLGALNKFRSGTRDILVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRTARAGKS 394
Query: 472 GRCFTLLHKDEVKRFKKL 489
G +L+ + +++ F+++
Sbjct: 395 GIAISLVTQYDIEIFQRI 412
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 193/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R L AL++ PTR+LA Q
Sbjct: 40 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILQALLDNPQR-LFALILTPTRELAFQ- 97
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
I+E C A+ +G+ + VG
Sbjct: 98 --------------------ISEQC------------------EALGSGIGVKCAVIVGG 119
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF+L L
Sbjct: 120 IDMMSQALMLAKKPH---------------------IIIATPGRLIDHLENTKGFSLRTL 158
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 159 KYLVMDEADRILNMDFEKEVDKLLKVIPKERR-------TFL------------------ 193
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + T+Y+ E+L+ L SK
Sbjct: 194 -------------FSATMTKKVQKLQRASLQAPVKVEVA-TKYQTVEKLQQSYLFIPSKF 239
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV +L L +VF + + R+ +L + G + G QS R L
Sbjct: 240 KDCYLVYVLNELAGNSFMVFCGTCNNVQRVTLMLRNLG---LDAVPLHGQMSQSKRLGAL 296
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +LV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 297 NKFKSKSRSILVATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRSVTF 356
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 357 VTQYDVELYQRI 368
>gi|345328224|ref|XP_001507068.2| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Ornithorhynchus anatinus]
Length = 716
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 224/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I G+ +D+C
Sbjct: 132 SKYDESLSFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGMLGKDICAC 181
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 182 AATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV---------------- 225
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF ++ + LAVG + +
Sbjct: 226 --HSVTKQLAQFSNV---------------------TTCLAVGGLDVKTQ---------- 252
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
EA + P DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 253 EAALRAGP-----------DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 301
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + ++++ C R M+ SA
Sbjct: 302 EEQMKEIIKM----------------------------CSHHRQ----------TMLFSA 323
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 324 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAVVSALLTRTFT 383
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I VLV++
Sbjct: 384 DHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDVLVAT 440
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 441 DVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 500
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + +P +I R
Sbjct: 501 TA---KAPVKARILPQDVILKFR 520
>gi|303283946|ref|XP_003061264.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457615|gb|EEH54914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 809
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 204/463 (44%), Gaps = 114/463 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA---LVVLP 109
P+Q AV + L RD+C + TGSGKT ++ LP+++ + +R R A LV++P
Sbjct: 203 PIQAAV----VPLALTGRDICGRAVTGSGKTAAFMLPLLERMLHRGARAAAATHVLVLVP 258
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+LA+QV H + QF S+
Sbjct: 259 TRELAVQV------------------HQMTMRLAQFTSI--------------------- 279
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
L VG S + +EL RP +I+VATPGRL+DH+ T
Sbjct: 280 RAALVVGGLSANTQAAELRTRP---------------------EIVVATPGRLIDHVRNT 318
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
LE L LV+DE DRLL +L + ++ +
Sbjct: 319 HSVGLEDLAALVLDEADRLL---EMGFLEEIREI-------------------------V 350
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---GETRYKLPERL 346
R C P R M+ SATLT +LA+ + HP L+ G T L E +
Sbjct: 351 RHC---------PTRRQT-MLFSATLTSGVQELAEFSMKHPARLSADQIGTTPGTLTEEV 400
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ S +K +L+AL+ +K IVF+ + + HRL ++ G I E G
Sbjct: 401 LRLRPGAAS-MKEAHLMALVNRTFTKKSIVFSRTKQQAHRLKIVMGLAG---IVAAELHG 456
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
Q+ R L++FR G+ LV++D RG+D+ GV+ V++YD P + +Y+HR GRTA
Sbjct: 457 DLSQTQRLAALESFRVGEASHLVATDVAARGLDIAGVDAVISYDAPRTLASYLHRVGRTA 516
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIE 509
RAG+ G T + + + K K + ++ S+P+ ++E
Sbjct: 517 RAGKRGTALTFMEESDRKLVKAVSKRGSK--LVARSLPNHVVE 557
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 209/453 (46%), Gaps = 108/453 (23%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 103
G+S+L F V + +TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 273 GLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTR 332
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
L++ PTR+LA+Q C HS+A F ++
Sbjct: 333 VLILCPTRELAMQ---------C---------HSVATKIASFTDIM-------------- 360
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
V L +G S+ + EL KRP DI++ATPGR +
Sbjct: 361 -------VCLCIGGLSLKLQEQELRKRP---------------------DIVIATPGRFI 392
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ ++GFT+E++ +V+DE DR+L + + L ++Q
Sbjct: 393 DHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQA-------------------- 432
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETRYK 341
C P R M+ SAT+T + L +L L+ P+ F+ +T K
Sbjct: 433 --------C---------PKSRQT-MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAK 474
Query: 342 LPERLESYKLICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
L + E ++ + +L +P L+ L + L + I+F S H++ + FG L +
Sbjct: 475 LLTQ-EFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVI---FGLLSLN 530
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E G Q R + L+ FR+GK L+++D +RG+D++G+ V+NY+ PA + Y+H
Sbjct: 531 ATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLH 590
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
R GRTARAG+ GR TL + + K K + + +
Sbjct: 591 RVGRTARAGRSGRAITLAGEGDRKVLKGVFKNS 623
>gi|125601387|gb|EAZ40963.1| hypothetical protein OsJ_25445 [Oryza sativa Japonica Group]
Length = 414
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 189/452 (41%), Gaps = 103/452 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR-CLRALVVLPTRDLALQ 116
+ E I L RD+ TGSGKT ++ALPI+Q L R C A V+ PTR+LA+Q
Sbjct: 9 IQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQ 68
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
+ F A+ A+ L + +G
Sbjct: 69 IAKQ---------------------------------------FEALGSAISLQCSVLIG 89
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ L KRP ++V TPGRL+DH+ T+GF+
Sbjct: 90 GIPRTSQTISLAKRPH---------------------VVVGTPGRLLDHLTNTKGFSFNK 128
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L YLV+DE D LL+ +Q + +L + + TFL
Sbjct: 129 LKYLVLDEADDLLKVDFQKAVDDILNVIPKERR-------TFL----------------- 164
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
SAT+T+ KL + L +P+ + ++Y L + L + +K
Sbjct: 165 --------------FSATMTEKVKKLRRACLKNPVKVEVA-SKYSLVDTLRQDLYVVPAK 209
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K YL+ +L + +VF + EST L +L + LR K SG Q R
Sbjct: 210 YKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN---LRFKAISISGQMSQDKRLGA 266
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L FR +LV +D +RG+D++GV+ V+NYD P K YIHR GRTARAGQ G +
Sbjct: 267 LNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVS 326
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 508
L+++ E + FK Q + P + + I
Sbjct: 327 LVNQFEGEFFKLTEQFLGGEEIPARKVDADEI 358
>gi|409051554|gb|EKM61030.1| hypothetical protein PHACADRAFT_24252 [Phanerochaete carnosa
HHB-10118-sp]
Length = 793
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 210/474 (44%), Gaps = 118/474 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ ++ + P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L
Sbjct: 204 PVLK-AIASLNFTKPTPIQAA----TIPVALLGKDIVGNAVTGSGKTAAFMIPMIERLMY 258
Query: 97 R-------AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
R A RC+ V++PTR+L +Q C + +A H+ C
Sbjct: 259 RERGKKAAATRCM---VLVPTRELGVQ---------CYEVGTKLAAHTDIRFC------- 299
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
L VG S+ + L RP
Sbjct: 300 -----------------------LVVGGLSLKSQEVALRTRP------------------ 318
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
DI++ATPGRL+DHI T FTL+ L LV+DE DR+L E +Q L +
Sbjct: 319 ---DIIIATPGRLIDHIRNTPTFTLDTLDILVLDEADRMLSEGFQDELAEI--------- 366
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
I+ C V R M+ SAT+T ++L ++ L+
Sbjct: 367 -------------------IKSCPVSR----------QTMLFSATMTDSVDELVRMSLNQ 397
Query: 330 PLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
P+ L R L+ + + SK + LV+L + + ++F S + H++
Sbjct: 398 PVRLFVDPKRTTARGLLQEFVRVRASKEDERSALLVSLCKRTFKGGVLIFFRSKKLAHQM 457
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
+ FG L +K E G Q R + L+AFREG + L+++D +RG+D++G++ V+
Sbjct: 458 RIV---FGLLGMKASELHGDLTQEQRLQALQAFREGSVDYLMATDLASRGLDIKGIDTVI 514
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
NYD P + Y+HR GRTARAG+ GR TL+ + + K K ++ A + H
Sbjct: 515 NYDMPGQVAQYLHRVGRTARAGKKGRSVTLVGEADRKILKAAIKHASGEDQVRH 568
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 199/438 (45%), Gaps = 103/438 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E + L +D+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+LA Q
Sbjct: 25 IQTEALPVALQGKDVIGLAETGSGKTGAFALPILQALLETPQR-LFALVLTPTRELAYQ- 82
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
IAE F A+ +G+S + VG
Sbjct: 83 --------------------IAEQ------------------FEALGSTIGVSCVVIVGG 104
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P +++ATPGRL+DH+ T+GF L L
Sbjct: 105 IDMMTQALQLAKKP---------------------HVMIATPGRLVDHLENTKGFNLRGL 143
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++A + +L++ +P RR
Sbjct: 144 KYLVMDEADRILNMDFEAEIDKILKV---------------IPKQ-------RRT----- 176
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + T+Y+ +L+ + +K
Sbjct: 177 -----------YLYSATMTKKVAKLQRASLQDPVKVEV-STKYQTVSKLQQSYIFIPAKY 224
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV++L +VF S+ +T R+ LL + G I + G QS R TL
Sbjct: 225 KDCYLVSILNEFAGNSFMVFCSTCNNTQRVALLLRNLGLTAIPL---HGQLSQSKRLGTL 281
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 282 NKFKSKSRSILIATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRAGKAITF 341
Query: 478 LHKDEVKRFKKLLQKADN 495
+ + +V+ ++++ Q D
Sbjct: 342 VTQYDVELYQRIEQLIDK 359
>gi|449547391|gb|EMD38359.1| hypothetical protein CERSUDRAFT_49063 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q+
Sbjct: 39 IQAEVLPHALQGRDIIGVAATGSGKTAAFALPILQKLWEEP-KGLFACVMAPTRELAYQI 97
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ QF+SL A+G+ VG
Sbjct: 98 SQ------------------------QFESL---------------GSAIGVRCATIVGG 118
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
I D+ L KRP I+VATPGRL DH+ T+GF+L L
Sbjct: 119 MPIMDQAVALAKRPH---------------------IVVATPGRLNDHLENTKGFSLRGL 157
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL + + +L++ + +T+L
Sbjct: 158 KFLVMDEADRLLDMDFGPIIDKILKVIPKER-------TTYL------------------ 192
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L +P+ + E +Y L Y L
Sbjct: 193 -------------FSATMTTKVAKLQRASLSNPVRVEVSE-KYSTVSTLLQYYLFIPLVQ 238
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K ++L+ L SL + I+FT +V RL +L G + + G QS R L
Sbjct: 239 KDVHLIYLANSLAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLH---GQLSQSARLGAL 295
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +VLV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 296 GKFKSGGRKVLVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTL 355
Query: 478 LHKDEVKRFKKL 489
+ + +V+ +++
Sbjct: 356 VTQYDVELVQRI 367
>gi|67967779|dbj|BAE00372.1| unnamed protein product [Macaca fascicularis]
Length = 764
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 220/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG +Q A I GL +D+C + T
Sbjct: 178 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTSIQKAC----IPVGLLGKDICACAAT 232
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 233 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 274
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG + + EA
Sbjct: 275 SVTRQLAQF---------------------CNITTCLAVGGLDVKSQ----------EAA 303
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 304 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 352
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 353 MKEI----------------------------IRMCSHHRQ----------TMLFSATMT 374
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 375 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 434
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 435 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 491
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 492 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA- 550
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 551 --KAPVKARILPQDVILKFR 568
>gi|225718584|gb|ACO15138.1| Probable ATP-dependent RNA helicase DDX47 [Caligus clemensi]
Length = 470
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 201/432 (46%), Gaps = 101/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT ++ALP++Q L + R L AL++ PTR+LA Q+
Sbjct: 56 IQKEAIPVALTGRDVIGLAETGSGKTGAFALPVLQALLEKPQR-LFALILTPTRELAYQI 114
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F + ++G+ G+ VG
Sbjct: 115 S---------------------------------------ETFEKLGKSIGIKCGVLVGG 135
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I+VATPGRL+DH+ T+GF L L
Sbjct: 136 MDMMSQALVLGKKPH---------------------IIVATPGRLIDHMENTKGFDLRSL 174
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YL++DE DR+L ++ + +L + LP G R+
Sbjct: 175 KYLIMDEADRILNMDFEIEVDKIL---------------SSLPRGEG-----RK------ 208
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
M+ SAT+T+ KL + L +P+ + ++Y+ ++L Y L K
Sbjct: 209 ----------NMLFSATMTKKVAKLQRASLQNPVRVEVS-SKYQTVDKLLQYYLFIPLKY 257
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV ++ L I+F+S+ T +L LL + G I + +G Q+ R +L
Sbjct: 258 KEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPL---NGQMSQNKRLASL 314
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ GR T
Sbjct: 315 NKFKTKSRSILIATDVASRGLDIPHVDIVINYDIPTHSKDYIHRVGRTARAGRSGRAITF 374
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 375 VCQYDVELYQRI 386
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 195/444 (43%), Gaps = 108/444 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A MG + P+Q E+I L +RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 67 ACATMGYKAPTPIQA----ESIPLALQDRDLIGLAETGSGKTAAFALPILQALMDKP-QS 121
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA Q++ + F
Sbjct: 122 FFGLVLAPTRELAFQISQS---------------------------------------FE 142
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 143 ALGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGR 181
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 182 LLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKIL--PRERR-----TFL-- 232
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT++ L + L +PL ++ +Y+
Sbjct: 233 -----------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQ 263
Query: 342 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
+ L+SY+ I K K +YLV LL + I+FT +V T R+ LL G I
Sbjct: 264 TVSTLLQSYRFIPH-KHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIP 322
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
+ G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+H
Sbjct: 323 LH---GQLSQSSRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVH 379
Query: 461 RAGRTARAGQLGRCFTLLHKDEVK 484
R GRTARAG+ G + + + +V+
Sbjct: 380 RVGRTARAGKSGVAISFVTQYDVE 403
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 190/437 (43%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G ++ P+Q ++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 67 ACDRLGYTNPTPIQA----QSIPHALQNRDVIGLAETGSGKTAAFALPIIQALLDKPSH- 121
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q+ ++ F
Sbjct: 122 LFGLVLAPTRELAAQIAAS---------------------------------------FE 142
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ V L V + VG + + L K+P I+VATPGR
Sbjct: 143 ALGSLVNLRVAVIVGGLDMVAQAIALGKKPH---------------------IVVATPGR 181
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 182 LVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK---------------FIPR 226
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L P+ ++ + ++
Sbjct: 227 E-------RRT----------------FLFSATMSSKIESLQRASLRDPVRISISSSSHQ 263
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + C K YLV L+ +K ++FT +V T RL LL G I I
Sbjct: 264 TVSTLIQNYIFCPHNKKDTYLVYLVNEYSGKKIVLFTRTVTETQRLAILLRTLGFGAIPI 323
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G Q+ R L FR G +LV++D RG+D+ V+ V+N+D P+ KTY+HR
Sbjct: 324 H---GQLNQTARLGALNKFRAGSRDILVATDVAARGLDIPLVDVVINFDIPSDSKTYVHR 380
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G+ T++
Sbjct: 381 VGRTARAGKSGKAITIM 397
>gi|302823844|ref|XP_002993570.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
gi|300138582|gb|EFJ05345.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
Length = 434
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 198/448 (44%), Gaps = 107/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+QV E + L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 22 ACTKLGWKAPTPIQV----EALPLALQGRDLIGLAQTGSGKTAAFALPILQALFQQC-HP 76
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
A V+ PTR+LA+Q++ + F
Sbjct: 77 FFACVLSPTRELAIQIS---------------------------------------EQFE 97
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ +G+ VG S+ D+ L K P I+VATPGR
Sbjct: 98 ALGSQIGVRSVAIVGGVSMVDQAVALGKNPH---------------------IVVATPGR 136
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L ++ YLV+DE D++L ++ + +L++ + + TFL
Sbjct: 137 LLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEILKVVPRERK-------TFL-- 187
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT+T KL + L +P + ++Y
Sbjct: 188 -----------------------------FSATMTNKVAKLQRACLRNPTKVEV-SSKYT 217
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L+ + +K K Y V LL + +VFT + +ST RL +L G I I
Sbjct: 218 TALTLKQEYVFVPAKHKDCYFVFLLNEMAGSTAMVFTRTCDSTRRLALILRSLGFGAIPI 277
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
SG QS RS L F+ G +L+ +D +RG+D+ V+ V+NYD P K YIHR
Sbjct: 278 ---SGQMSQSKRSGALLKFKAGDRNLLICTDVASRGLDIPSVDVVINYDIPTNSKDYIHR 334
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ GR +++ + +V +K++
Sbjct: 335 VGRTARAGRSGRAISIVTQYDVDLYKRI 362
>gi|402221947|gb|EJU02015.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 809
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 216/504 (42%), Gaps = 112/504 (22%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLC 73
+ +P + D + P LK AL N+G P+Q A I L +D+
Sbjct: 206 YFDTPDAATSTSDVTFQSMNLSRPLLK-ALANLGFEKPTPIQAAA----IPVALLGKDVV 260
Query: 74 INSPTGSGKTLSYALPIVQTL----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
+ TGSGKT ++ +PI++ L +A R +++ PTR+LA+Q C
Sbjct: 261 GGAVTGSGKTAAFVIPILERLLFRDRGKAAATTRVVILCPTRELAVQ---------C--- 308
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
H++A F + F L VG S+ + +EL
Sbjct: 309 ------HAVATRIGSFTDVRF---------------------SLVVGGLSLKGQEAELRT 341
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
RP D+++ATPGRL+DH+ + F+L+ L L++DE DR+L
Sbjct: 342 RP---------------------DVVIATPGRLIDHLRNSPSFSLDMLDVLIMDEADRML 380
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
E + A L + I C +R M
Sbjct: 381 EEGFAAELGEI----------------------------ISACPKQR----------QTM 402
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQ 367
+ SAT+T ++L ++ L+ P+ L + + + + +++ +P L+ L +
Sbjct: 403 LFSATMTDSVDELIRMGLNKPVRLFVDPRKSTASGLTQEFVRVRDNREDDRPALLMTLCK 462
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
+CI+F S H++ + FG L +K E G Q R + L+ F++G +
Sbjct: 463 RTFRTRCIIFFRSKAFAHQMRIV---FGLLGMKAGELHGNLTQEQRLRALQQFKDGDVDF 519
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
L+++D +RG+D+ G+ V+NYD P I Y+HR GRTARAG GR TL+ + + K K
Sbjct: 520 LLATDLASRGLDIRGIETVINYDMPGQIAQYLHRVGRTARAGSKGRSVTLVGEADRKMLK 579
Query: 488 KLLQKADNDSCPIHSIPSSLIESL 511
+++ + D +P+ + +
Sbjct: 580 AVIKHSPADQVKHRLVPAEAVAKM 603
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 194/440 (44%), Gaps = 103/440 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + + E + L RD+ + TGSGKT ++ LPI+Q L + L A V+ PTR
Sbjct: 37 FKIPTEIQVEALPHALEGRDIIGVAATGSGKTAAFGLPILQKLWEEP-KGLFACVLAPTR 95
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ Q +SL A+G
Sbjct: 96 ELAYQISQ------------------------QLESL---------------GSAMGARC 116
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L KRP I+VATPGRLMDH+ T+G
Sbjct: 117 AVIVGGMDMPAQAIALAKRPH---------------------IVVATPGRLMDHLEKTKG 155
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F L ++ +LV+DE DRLL + + +L+L + +T+L
Sbjct: 156 FNLRNIKFLVLDEADRLLDLDFGTIIDKILKLIPKER-------TTYL------------ 196
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
SAT+T KL + L +P+ + T+Y+ L Y L
Sbjct: 197 -------------------FSATMTTKVAKLQRASLSNPVRVEV-STKYQTVSTLLQYYL 236
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
+ K K YLV L +L + I+FT +V RL +L G + + G QS
Sbjct: 237 LMPLKDKDAYLVYLANTLAQNSIIIFTRTVHDASRLSIILRTLGFPAVPLH---GQLSQS 293
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L F+ G +VLV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+
Sbjct: 294 QRLGALGQFKSGGRRVLVATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGRTARAGRA 353
Query: 472 GRCFTLLHKDEVKRFKKLLQ 491
G+ TL+ + +V+ +++ Q
Sbjct: 354 GKSITLVTQYDVELVQRIEQ 373
>gi|340372039|ref|XP_003384552.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Amphimedon queenslandica]
Length = 451
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 197/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L RD+ + TGSGKT +++LPI+Q+L + R L ALV+ PTR+LA Q+
Sbjct: 52 IQREAIPVALEGRDVIGLAETGSGKTGAFSLPILQSLLDTPTR-LFALVLTPTRELAFQI 110
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ + VG
Sbjct: 111 S---------------------------------------EQFEALGGRIGVKCAVVVGG 131
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P +++ATPGRL+DH+ T+GF+L +
Sbjct: 132 VDMMTQALALAKKPH---------------------VVIATPGRLVDHLENTKGFSLRSV 170
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L + + +L++ E R T+L
Sbjct: 171 KYLVMDEADRILNMDFGEEVDKILKVL--SRERR-----TYL------------------ 205
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + LH+P+ + T+Y+ ++L+ + SK
Sbjct: 206 -------------YSATMTKKVQKLQRASLHNPIKVEVS-TKYQTVDKLQQSYIFIPSKY 251
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV++L +VF S+ +T R +L + G I + G Q R L
Sbjct: 252 KDCYLVSILNEFAGNSFMVFCSTCANTQRTAVMLRNLGLPAIPL---YGKMAQMKRLGAL 308
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 309 SKFKSKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRAITF 368
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 369 VTQYDVELYQRI 380
>gi|432110218|gb|ELK33991.1| Putative ATP-dependent RNA helicase DDX27 [Myotis davidii]
Length = 863
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 216/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ M P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 197 PLLK-AITAMNFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 251
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF
Sbjct: 252 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTKQLAQF--------- 284
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 285 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 311
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 312 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 357
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 358 --------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIF 393
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 394 VNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLTRTFTDHVMLFTQTKKQAHRMHILLG 453
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R ++L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 454 LMG---LQVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 510
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 511 NTIKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 567
Query: 511 LR 512
R
Sbjct: 568 FR 569
>gi|392884823|ref|NP_490891.2| Protein Y71G12B.8 [Caenorhabditis elegans]
gi|373219451|emb|CCD67990.1| Protein Y71G12B.8 [Caenorhabditis elegans]
Length = 739
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 211/471 (44%), Gaps = 111/471 (23%)
Query: 47 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRA 104
G S P+Q Q I L +D+C + TG+GKT ++ LPI++ + R C R
Sbjct: 167 GYSDPTPIQ----QACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRV 222
Query: 105 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 164
LV++PTR+LA+ QV VF ++
Sbjct: 223 LVLVPTRELAI---------------------------------------QVFQVFRKLS 243
Query: 165 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 224
+ L V L G G+ ++ L+S D++VATPGRL+D
Sbjct: 244 TFIQLEVCLCAG-------------------GLDLKAQEAA--LRSGPDVVVATPGRLID 282
Query: 225 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 284
H++ + F L ++ LV+DE DR+L EA++ + +++L
Sbjct: 283 HLHNSPSFNLSNIEVLVLDEADRMLEEAFRDQMNELIRL--------------------- 321
Query: 285 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE---TRYK 341
C R ++ SAT+T++ ++LA + L P+ + E T K
Sbjct: 322 -------CAQNRQT----------LLFSATMTEEIDELASMSLQKPVKIFINENTDTALK 364
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + + E+ + + + AL+ + IVF + + R+ LL G IK+
Sbjct: 365 LRQEFIRIRAGRETDREAM-VAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLG---IKV 420
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
+ Q R ++L F++ +I VLVS+D +RG+D+EGV V+N + P IK YIHR
Sbjct: 421 GQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHR 480
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
GRTARAG+ GR +L+ +DE K K+++ + + + ++E+ R
Sbjct: 481 VGRTARAGKAGRSISLVGEDERKLLKEIVNSNADRTLKQRLVAPEVVEAYR 531
>gi|301621509|ref|XP_002940090.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Xenopus
(Silurana) tropicalis]
Length = 760
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 227/500 (45%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ M + P+Q A I GL +D+C + T
Sbjct: 175 DASQYDENLMFQEMNLSRPLLK-AISAMSFTQPTPIQKAC----IPIGLLGKDICACAAT 229
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ LP+++ L R R LV++PTR+L +QV H
Sbjct: 230 GTGKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQV------------------H 271
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
+++ + QF + + LAVG + + EA
Sbjct: 272 AVSRLLAQFTEV---------------------TTCLAVGGLDVKTQ----------EAA 300
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L+S D+L+ATPGRL+DH++ F+L+ + L++DE DR+L E ++
Sbjct: 301 -----------LRSGPDVLIATPGRLIDHLHNCPSFSLDSIEVLILDEADRMLDEYFEEQ 349
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ +++L C +R ++ SAT++
Sbjct: 350 MKEIIRL----------------------------CSHQRQ----------TLLFSATMS 371
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA--LLQSLGEEKC 374
++ LA + L +P+ + P + + I ++ VA LL ++
Sbjct: 372 EEVKDLASVSLRNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAVACALLTRTFQDHV 431
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R ++L+ F++ +I +LV++D
Sbjct: 432 MLFTQTKKQAHRMHILLGLMG---LRVGELHGNLSQTQRLESLRRFKDEQIDILVATDVA 488
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D++GV V+N P +K Y+HR GRTARAG+ GR +L+ ++E K K++++KA
Sbjct: 489 ARGLDIDGVKTVINLTMPGTVKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIVKKA- 547
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + IP +I R
Sbjct: 548 --QAPVKARVIPQDVISKFR 565
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 201/448 (44%), Gaps = 107/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G S +QV E I L +D+ + TGSGKT ++ALPI+Q+L R
Sbjct: 53 ACDQLGWKSPTKIQV----EAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQR- 107
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ + F
Sbjct: 108 LHTLVLTPTRELAFQIS---------------------------------------EQFE 128
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ ++G+ + VG + + L K+P I++ATPGR
Sbjct: 129 ALGSSIGVKCAVIVGGIDMMSQSLVLAKKPH---------------------IVIATPGR 167
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L +LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 168 LIDHMENTKGFSLRALKFLVMDEADRILNMDFETEVDKILKVI--PRERR-----TFL-- 218
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT+T+ KL + L P+ T+Y
Sbjct: 219 -----------------------------FSATMTKKVQKLQRAALKDPVKCAVS-TKYS 248
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
++L+ Y + +K K YLV++L L ++F S+ + R+ +L + G I +
Sbjct: 249 TVDKLQQYYVFIPAKYKDCYLVSILNELAGNSFMIFCSTCNNAQRVALMLRNLGITAIPL 308
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G Q+ R L F+ VL+++D +RG+D+ V+ V+NYD P + K YIHR
Sbjct: 309 ---HGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHR 365
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G+ T + + +V+ F+++
Sbjct: 366 VGRTARAGRSGKSITFVTQYDVELFQRI 393
>gi|395829165|ref|XP_003787731.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Otolemur garnettii]
Length = 795
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 221/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 209 DASQYDENLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 263
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 264 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 305
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF ++ LAVG + + EA
Sbjct: 306 SVTRQLAQF---------------------CNITTCLAVGGLDVKSQ----------EAA 334
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 335 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 383
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 384 MKEI----------------------------IRLCSHHR----------QTMLFSATMT 405
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 406 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 465
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 466 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 522
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E + K++++ A
Sbjct: 523 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERRMLKEIVKAA- 581
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 582 --KAPVKARILPQDVILKFR 599
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 204/467 (43%), Gaps = 107/467 (22%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
L E+ D L + P++ A MG F + +E+I + RD+ + TGSGK
Sbjct: 78 LDENTTFDQL-GMHPQIIEACVRMG----FKKPTEIQRESIPHAIAGRDIIGLAQTGSGK 132
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
T ++A+PI+Q L ++ + L AL++ PTR+LA Q++
Sbjct: 133 TAAFAIPILQQLL-QSPQPLFALILSPTRELAFQISQQ---------------------- 169
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
F A+ +G+ G+ VG + + L ++P
Sbjct: 170 -----------------FEALGAVIGVKCGVLVGGMDVMQQAMVLARKPH---------- 202
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
I+V TPGR+M H+ T+GF L+ L +LV+DE DRLL ++ + +L+
Sbjct: 203 -----------IIVGTPGRVMYHLENTKGFHLKALKFLVMDEADRLLSMDFEEEINKILK 251
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
+ N N + + SAT+T KL
Sbjct: 252 VI-PKNRNTY-------------------------------------LFSATMTSKVAKL 273
Query: 323 AQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVE 382
+ L +P+ + T+Y + L + K YL +L L IVF ++
Sbjct: 274 QKASLVNPIKVQVASTKYSTVDTLVQQYCFIPYQHKDCYLTYILNELSGNSAIVFVATCA 333
Query: 383 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 442
+++RL +L + G I I +G Q+ R +L F+ +LV++D RG+D+
Sbjct: 334 ASNRLSVMLRNLGLGAIPI---NGNMDQTKRLASLNKFKSSVKNILVATDVAARGLDIPS 390
Query: 443 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
V VVNYD P K Y+HR GRTARAGQ GR TL+ + +V+ ++++
Sbjct: 391 VGLVVNYDIPVNSKEYVHRVGRTARAGQSGRAITLVTQYDVEVYQRI 437
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 198/444 (44%), Gaps = 107/444 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P + ++Q M + P+Q E+I L +D+ + TGSGKT ++A+PI+Q L
Sbjct: 80 LIPEILESIQAMKFTKPTPIQA----ESIPHALAGKDIIGLAQTGSGKTAAFAIPILQAL 135
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A +LV+ PTR+LA Q+
Sbjct: 136 WH-AKTPYFSLVLAPTRELAFQI------------------------------------- 157
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
K+ F A+ ++GL VG + D+ +L+++P +
Sbjct: 158 --KETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPH---------------------V 194
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGR+ DH+ T+GF+L++L YLV+DE DRLL + L +L++
Sbjct: 195 IVATPGRITDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKV----------- 243
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+P VER + SAT+T KL + L +P+ +
Sbjct: 244 ----IP-------------VER----------TSYLFSATMTNKIAKLQRASLKNPVRVA 276
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ K +LV LL + IVFT +V ++ R L
Sbjct: 277 VS-NKYQTADNLVQSMMLVSDGYKNTFLVHLLNEFMGKSIIVFTRTVANSERTAILTRLL 335
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + +G Q+ R L F+ GK +L+++D RG+D+ V+ V+NYD P
Sbjct: 336 GFSSVPL---NGQLSQTQRLGALNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTD 392
Query: 455 IKTYIHRAGRTARAGQLGRCFTLL 478
K YIHR GRTARAG+ G+ +L+
Sbjct: 393 SKAYIHRVGRTARAGKSGKSISLV 416
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 189/437 (43%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 104 ACERLGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-P 158
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L ALV+ PTR+LA Q+ A F
Sbjct: 159 LFALVLAPTRELAAQIAQA---------------------------------------FE 179
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L L +G + + L K+P ++VATPGR
Sbjct: 180 ALGSLISLRCALILGGMDMVTQAIALGKKPH---------------------VIVATPGR 218
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L + YLV+DE DRLL + L +L+ FLP
Sbjct: 219 LLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILK---------------FLPR 263
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ +Y
Sbjct: 264 E-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVSSNKYA 300
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L+S + K YLV L + I+FT +V T R+ LL G I +
Sbjct: 301 TVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL 360
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
+ GL QS R L FR G ++LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 361 --HGGLS-QSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHR 417
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G +++
Sbjct: 418 VGRTARAGKSGHAISIV 434
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 189/437 (43%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 104 ACERLGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-P 158
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L ALV+ PTR+LA Q+ A F
Sbjct: 159 LFALVLAPTRELAAQIAQA---------------------------------------FE 179
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L L +G + + L K+P ++VATPGR
Sbjct: 180 ALGSLISLRCALILGGMDMVTQAIALGKKPH---------------------VIVATPGR 218
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L + YLV+DE DRLL + L +L+ FLP
Sbjct: 219 LLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILK---------------FLPR 263
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ +Y
Sbjct: 264 E-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVSSNKYA 300
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L+S + K YLV L + I+FT +V T R+ LL G I +
Sbjct: 301 TVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL 360
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
+ GL QS R L FR G ++LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 361 --HGGLS-QSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHR 417
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G +++
Sbjct: 418 VGRTARAGKSGHAISIV 434
>gi|308497817|ref|XP_003111095.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
gi|308240643|gb|EFO84595.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
Length = 749
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 219/493 (44%), Gaps = 116/493 (23%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVA---------VWQETIGPGLFERDLCINSPTGSGKTL 84
LD + V+ + M +S A + Q I L +D+C + TG+GKT
Sbjct: 148 SLDTNVNVSFEQMNLSRQILKACAGAGYTDPTPIQQACIPVALSGKDICACAATGTGKTA 207
Query: 85 SYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
++ LPI++ + R C R LV++PTR+LA+
Sbjct: 208 AFVLPILERMIYRPKGASCTRVLVLVPTRELAI--------------------------- 240
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
QV VF ++ + L V L G G+ +
Sbjct: 241 ------------QVFQVFRKLSTFIQLEVCLCAG-------------------GLDLKAQ 269
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
+ L+S D++VATPGRL+DH++ + F L + LV+DE DR+L EA++ + +++
Sbjct: 270 EAA--LRSGPDVVVATPGRLIDHLHNSPNFNLGSIEVLVLDEADRMLEEAFRDQMNELIR 327
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
L ENR + ++ SAT+T++ ++L
Sbjct: 328 LC---AENRQT-----------------------------------LLFSATMTEEIDEL 349
Query: 323 AQLDLHHPLFLTTGE---TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 379
A + L P+ + E T KL + + E+ + + + AL+ + IVF
Sbjct: 350 ASMSLQRPVKIFINENTDTALKLRQEFIRIRAGRETDRESM-VAALVTRTFQTNTIVFVR 408
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
+ + R+ LL G IK+ + Q R ++L F++G+I VLVS+D +RG+D
Sbjct: 409 TKKDCQRMQILLGLLG---IKVGQMQSSLTQGQRIESLSKFKKGEIDVLVSTDLASRGLD 465
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 499
+EGV V+N + P IK YIHR GRTARAG+ GR +L+ ++E K K+++ + +
Sbjct: 466 IEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEEERKLLKEIVNSNADRTLK 525
Query: 500 IHSIPSSLIESLR 512
+ ++E+ R
Sbjct: 526 QRLVAPEVVEAYR 538
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 196/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 65 IQRESIPVALQGKDIIGLAETGSGKTAAFALPILQALLENPQRHF-ALILTPTRELAFQI 123
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ + VG
Sbjct: 124 S---------------------------------------EQFEALGSGIGVKSIVIVGG 144
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH++ T+GF L L
Sbjct: 145 LDMTSQALMLAKKPH---------------------IIIATPGRLVDHLSNTKGFNLRAL 183
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L ++A + +L++ + TFL
Sbjct: 184 KFLVMDEADRILNMDFEAEVDKILKVIPRERR-------TFL------------------ 218
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ NKL + L P+ + T+Y+ E+L Y + +K
Sbjct: 219 -------------FSATMTKKVNKLQRACLQDPVRVEVS-TKYQTVEKLLQYYVFIPAKF 264
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L +VF S+ +T R LL + G + + G Q+ R L
Sbjct: 265 KDVYLVHILNENAGNSFMVFCSTCNNTIRTALLLRNLGFTAVPLH---GQMSQNKRLAAL 321
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 322 TKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPMHSKDYIHRVGRTARAGRSGKAITF 381
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 382 VTQYDVELYQRI 393
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 196/434 (45%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 28 IQREAIPLVLEGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 86
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ ++G+ + VG
Sbjct: 87 SEQ---------------------------------------FEALGSSIGVKCAVIVGG 107
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF L +
Sbjct: 108 MDMHAQGLLLEKKP---------------------HIIIATPGRLVDHLENTKGFNLRQI 146
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+L++DE DR+L ++ + +L++ +P RR
Sbjct: 147 KFLIMDEADRILNMDFEVEVNKILRV---------------MPRE-------RRT----- 179
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 180 -----------LLFSATMTKKVQKLQRASLRNPVKVEVS-TKYQTVEKLQQYYIFIPVKF 227
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F + +T R LL + G + + G Q+ R L
Sbjct: 228 KDVYLVHILNELAGNNFMIFCGTCNNTVRTALLLRNLGFTAVPL---HGQMSQNKRIAAL 284
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
FR +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR T
Sbjct: 285 TKFRAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITF 344
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 345 ITQYDVELYQRIEQ 358
>gi|291239420|ref|XP_002739621.1| PREDICTED: Rs1-like [Saccoglossus kowalevskii]
Length = 563
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 215/485 (44%), Gaps = 121/485 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ M P+QVA TI L +D+C + TG+GKT ++ LP+++ L
Sbjct: 6 PLLK-AINAMNFVHPTPIQVA----TIPVALLGKDICACAATGTGKTAAFMLPVLERLLY 60
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF---DSLLFI 151
+ R LV++PTR+L +QV HS+ QF DS L
Sbjct: 61 KPKQAAVTRVLVLVPTRELGIQV------------------HSVTRQLAQFTEIDSCL-- 100
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
AVG GL V KL+ + L+
Sbjct: 101 --------------AVG---GLDV----------------KLQEAV----------LRQG 117
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
DI++ATPGRL+DH++ F+L ++ L++DE DR+L E ++ + +
Sbjct: 118 PDIVIATPGRLIDHLHNAPSFSLSNIEILILDEADRMLDEYFEEQMKEI----------- 166
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
IR C + R M+ SAT+T + L + L +P+
Sbjct: 167 -----------------IRMCSITRQ----------TMLFSATMTDEVKDLVAVSLKNPV 199
Query: 332 FLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
L E + + I E++ + AL + IVF + + HRL
Sbjct: 200 RLFINENTDVAYNLRQEFIRIRENREGDREAIAAALCSRTFHDHVIVFVQTKKQCHRLHI 259
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
+L G L + + E G Q+ R +TL+ F+E I +++++D RG+D+EG+ ++N+
Sbjct: 260 IL---GMLGLNVGELHGNLSQTQRLETLRRFKESNIDIMLATDLAARGLDIEGIKTIINF 316
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSL 507
P +K Y+HR GRTARAG+ GR +L + E K K+++++A N P+ S +P +
Sbjct: 317 TMPNTVKHYVHRVGRTARAGKSGRSVSLCGEKERKMLKEIVKRARN---PVKSRVVPPDI 373
Query: 508 IESLR 512
+ R
Sbjct: 374 VAKYR 378
>gi|171691382|ref|XP_001910616.1| hypothetical protein [Podospora anserina S mat+]
gi|170945639|emb|CAP71752.1| unnamed protein product [Podospora anserina S mat+]
Length = 490
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 182/423 (43%), Gaps = 102/423 (24%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
A+ QE I L +RD+ + TGSGKT ++ALPI+Q L ++ + L ALV+ PTR+LA
Sbjct: 86 TAIQQEAIPLALQDRDIIGIAETGSGKTAAFALPILQALLDKP-QPLFALVLAPTRELAA 144
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ + F A+ + L L +
Sbjct: 145 QIAQS---------------------------------------FEALGSLINLRCALLL 165
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + + L K+P ++VATPGRL+DH+ T+GF+L
Sbjct: 166 GGLDMVQQAIALGKKPH---------------------VVVATPGRLLDHLEKTKGFSLR 204
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
+L Y V+DE DRLL + L +L+ FLP RR
Sbjct: 205 NLRYCVMDEADRLLDMDFGPILEKILK---------------FLPRE-------RRT--- 239
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
+ SAT++ L + L PL + ++Y+ L S L
Sbjct: 240 -------------FLFSATMSSKVESLQRASLRDPLKVNVSTSKYQTVSTLVSNYLFIPH 286
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K Y + L + IVFT +V T R+ LL G I + + GL QS R
Sbjct: 287 IHKDTYFIYLCNEFAGKTMIVFTRTVLETQRIAILLRTLGMGAIPL--HGGLS-QSARLG 343
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+ G
Sbjct: 344 ALSKFRAGTRNILVATDVAARGLDIPNVDCVINYDLPQDSKTYIHRVGRTARAGKSGHAL 403
Query: 476 TLL 478
+++
Sbjct: 404 SIV 406
>gi|258563612|ref|XP_002582551.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
gi|237908058|gb|EEP82459.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
Length = 472
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RD+ + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 69 PTQIQA--ESIPLALQGRDVIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 125
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ QV+ A+ + +
Sbjct: 126 LAYQISE-----------------------------------QVE----ALGSLISVRCA 146
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 147 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 185
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L +L YLV+DE DRLL + L +L++ LP RR
Sbjct: 186 SLRNLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 223
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
+ SAT++ L + L +PL ++ +Y+ L L
Sbjct: 224 ----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQNYLF 267
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K +Y V LL + IVFT +V T RL LL G I + G QS
Sbjct: 268 IPHKYKDIYFVYLLNEFPGQSVIVFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSA 324
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 325 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 384
Query: 473 RCFTLLHKDEVKRFKKL 489
F+L+ + +++ ++++
Sbjct: 385 HAFSLVTQFDIEIWQRI 401
>gi|196003440|ref|XP_002111587.1| hypothetical protein TRIADDRAFT_23405 [Trichoplax adhaerens]
gi|190585486|gb|EDV25554.1| hypothetical protein TRIADDRAFT_23405, partial [Trichoplax
adhaerens]
Length = 463
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 203/461 (44%), Gaps = 110/461 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ +G P+Q + TI L +D+C + TG+GKT ++ LPI++ L
Sbjct: 27 PLLK-AISTLGFEHPTPIQSS----TIPIALLGKDICACAATGTGKTAAFMLPILERLIY 81
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R R LV++PTR+LA+QV S C ++ E C
Sbjct: 82 RPKRIPVTRVLVLVPTRELAIQVFSVGKSLC---------QYTDIEFC------------ 120
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
LA G IA + EA + +P DI
Sbjct: 121 ------------------LAAGGLDIASQ----------EAALRRNP-----------DI 141
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH++ T F L+ + LV+DE DR + E ++ + +++L+ +
Sbjct: 142 VIATPGRLVDHLHNTPSFDLQGIEILVLDEADRQIHEHFKDQMDELIRLSPKGRQT---- 197
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
M+ SAT+T + +LA L L+ P+ L
Sbjct: 198 ----------------------------------MLFSATMTDEVEELATLSLNKPIRLF 223
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
+ + I ++ + + AL E+C++F HRL +L
Sbjct: 224 INRNTDVANNLRQEFIRIRPAREDDREAIIAALCYRQFNERCLIFMPMKWQVHRLRIVL- 282
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G L + + E G Q R + F++G+I +LV++D RG+D+EGV V+NY+ P
Sbjct: 283 --GLLGLSVDELHGNLTQLQRLEAFNRFKKGEIGILVATDLAARGLDIEGVRTVINYNIP 340
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
A K Y+HR GRTARAGQ GR TL+ + E K K +++ +
Sbjct: 341 ATTKQYVHRVGRTARAGQFGRSITLVVEKERKLLKTIVKNS 381
>gi|302690998|ref|XP_003035178.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
gi|300108874|gb|EFJ00276.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
Length = 449
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 209/482 (43%), Gaps = 112/482 (23%)
Query: 15 MRSPVDVSLFEDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLC 73
M P + S P L +DP L+ AL M F + + + L RD+
Sbjct: 1 MAGPEEASTSAAAPTFKSLGLIDPLLE-ALDKMS----FKAPTEIQAQALPHALEGRDII 55
Query: 74 INSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TGSGKT ++ALPI+Q L + + L A V+ PTR+LA Q++
Sbjct: 56 GVASTGSGKTAAFALPILQKLWDDP-KGLFACVLAPTRELAYQISQQ------------- 101
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
F A+ A+G+ + VG + I + L KRP
Sbjct: 102 --------------------------FEALGSAMGVRCAVIVGGTDIMAQKVALAKRPH- 134
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
I+VATPGRL DH+ T+GF L + +LV+DE DRLL +
Sbjct: 135 --------------------IVVATPGRLDDHLEKTKGFNLRGIKFLVLDEADRLLDMDF 174
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ +L++ + +T+L SA
Sbjct: 175 GPVIDKILKVIPKER-------TTYL-------------------------------FSA 196
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 373
T+T KL + L +P+ + T+Y+ + L Y L+ K K LV L +L +
Sbjct: 197 TMTTKVAKLQRASLSNPVRVEV-NTKYQTVDSLLQYYLLMPLKEKDTLLVYLANTLAQNS 255
Query: 374 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
I+FT +V RL +L G + + G QS R L F+ G +VLV++D
Sbjct: 256 IIIFTRTVNDAARLSIILRTLGFPAVPL---HGQLSQSQRLGALSKFKSGGRKVLVATDV 312
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLL 490
+RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T + + +V+ R +K++
Sbjct: 313 ASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRAGKSITFVTQYDVEFIMRIEKVI 372
Query: 491 QK 492
K
Sbjct: 373 GK 374
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 195/453 (43%), Gaps = 107/453 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV ++I L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 118 PQIVEACTNMGFKHPTPIQV----KSIPEALQSRDVIGLAQTGSGKTAAFTIPILQALWD 173
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A V+ PTR+LA Q++ QV
Sbjct: 174 NP-KPFFACVLAPTRELAYQISQ-----------------------------------QV 197
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ A+ +G+ VG + + L KRP ++V
Sbjct: 198 E----ALGSTIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIV 232
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL DH+ T+GF+L L YLV+DE DRLL + + +LQ
Sbjct: 233 ATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ-------------- 278
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
S+ RR M+ SAT+T KL + L +P+ +
Sbjct: 279 --------SIPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV- 313
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T+Y L+ + L K YLV L IVFT +V + RL LL G
Sbjct: 314 DTKYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGF 373
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K
Sbjct: 374 PAIPLH---GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSK 430
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
YIHR GRTARAG+ GR TL+ + +V+ +++
Sbjct: 431 DYIHRVGRTARAGRSGRSVTLVTQYDVELLQRI 463
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 194/437 (44%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ V + + L D+ + TGSGKT ++ALPI+Q L + L A V+ PTR+
Sbjct: 42 PTQIQV--DAVPVALKGHDIIGLAQTGSGKTATFALPILQALLENP-QPLFACVLSPTRE 98
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA+Q IAE F A+ +GL
Sbjct: 99 LAIQ---------------------IAEQ------------------FEALGSGIGLKCA 119
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L KRP ++V TPGRL+DH+ T+GF
Sbjct: 120 VLVGGIDMMAQSVALAKRP---------------------HVVVGTPGRLVDHLTNTKGF 158
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L + YLV+DE DRLL ++ + +L++ + T+L
Sbjct: 159 SLRTIKYLVLDEADRLLNMDFEQEIDEILKVIPKERR-------TYL------------- 198
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T KL + L +P+ + +Y + L+ L
Sbjct: 199 ------------------FSATMTTKVAKLQRACLKNPVKVEV-SAKYSTVDSLKQEYLF 239
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
+K K YLV +L L +VFT + E+T +L +L + G + I I SG Q
Sbjct: 240 IPAKYKDCYLVYILNELAGNTAMVFTRTCEATRKLSLVLRNLGFVAIPI---SGQMSQPK 296
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L F+ G +L+ +D +RG+D+ VN V+NYD P K YIHR GRTARAG+ G
Sbjct: 297 RLGALAKFKAGDCNILICTDVASRGLDIPSVNLVINYDIPTNSKDYIHRVGRTARAGRSG 356
Query: 473 RCFTLLHKDEVKRFKKL 489
R +++ + +V+ ++K+
Sbjct: 357 RAISMVCQYDVELYQKI 373
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 211/480 (43%), Gaps = 124/480 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
AL +G + P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 193 ALTTLGFTKPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFTIPMLERLLYREKGK 248
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
R LV++PTR+LA+Q C + +A H+ E
Sbjct: 249 KAAATRCLVLVPTRELAVQ---------CYEVGKKLAAHTDIE----------------- 282
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
V L VG S+ + + L RP DI++A
Sbjct: 283 -------------VALIVGGLSLKSQEATLRARP---------------------DIVIA 308
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DHI+ + FTL++L LV+DE DR+L + + L +
Sbjct: 309 TPGRLIDHIHNSPSFTLDNLDVLVLDEADRMLSDGFADELTEI----------------- 351
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
I+ C P R M+ SAT+T ++L ++ L P+ L
Sbjct: 352 -----------IKAC---------PKSRQT-MLFSATMTDSVDELVRMSLDKPVRL---- 386
Query: 338 TRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
+ P+R + LI E K + LVAL + + I+F S + H+L
Sbjct: 387 --FVDPKRSTAKGLIQEFVRVRAGREKERSPLLVALCTRTFKTRVIIFVRSKKLAHQLRI 444
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
+ FG + +K E G Q R L+ FR+G + L+++D +RG+D++GV V+NY
Sbjct: 445 V---FGLVGLKCGELHGDLSQEQRLNALQQFRDGTVDYLMATDLASRGLDIKGVETVINY 501
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPIHSIPSSLI 508
D P + Y+HR GRTARAG+ GR TL+ + + K K ++ + D ++P ++
Sbjct: 502 DMPGQLAQYLHRVGRTARAGKKGRSVTLVGEGDRKMLKAAIKHSTGQDQIRHRTVPPEVV 561
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 189/437 (43%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q ++ I L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 84 ACERLGYKRPTPIQ----EQAIPLALQNRDLIGIAETGSGKTAAFALPILQALLDKP-QP 138
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L ALV+ PTR+LA Q+ A F
Sbjct: 139 LFALVLAPTRELAAQIAQA---------------------------------------FE 159
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L L +G + + L K+P ++VATPGR
Sbjct: 160 ALGSMISLRCALILGGLDMVQQAIALGKKPH---------------------VIVATPGR 198
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L+ FLP
Sbjct: 199 LLDHLEKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKILK---------------FLPR 243
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ ++Y+
Sbjct: 244 E-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSISTSKYQ 280
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + + K YL+ L+ + I+FT +V T R+ LL G I +
Sbjct: 281 TVSTLVQHYIFIPHIHKDTYLIYLVNEFAGKTIIIFTRTVLETQRIAILLRTLGMGAIPL 340
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
+ GL QS R L FR G +LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 341 --HGGLS-QSARLGALNKFRAGSRNILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHR 397
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G + +
Sbjct: 398 VGRTARAGKSGHAISFV 414
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 206/464 (44%), Gaps = 111/464 (23%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ M + +Q E + L RD+ + TGSGKT ++ALPI+
Sbjct: 28 LGLIDPLLE-ALEQMKYKAPTDIQA----EALPHALQGRDIIGVASTGSGKTAAFALPIL 82
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
Q L + L A V+ PTR+LA Q+ QF+S
Sbjct: 83 QKLWEDP-KGLFACVIAPTRELAFQITQ------------------------QFES---- 113
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
I A+G+ +G I + L K+P
Sbjct: 114 -----------IGSAMGVRCATIIGGVDIQSQKIALAKKP-------------------- 142
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
++VATPGRL++H+ T+GF+L L +LV+DE DRLL + L +L+L +
Sbjct: 143 -HVIVATPGRLLEHLEETKGFSLRSLKFLVLDEADRLLDMDFGPILDKILKLIPKER--- 198
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
+T+L SAT+T KL + L +P+
Sbjct: 199 ----TTYL-------------------------------FSATMTTKVAKLQRASLSNPV 223
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
+ ++Y L Y L+ K ++L+ L +L + I+FT +V RL +L
Sbjct: 224 RVEV-NSKYSTVSTLLQYYLLMPLPQKDVHLIYLANTLAQNSMIIFTRTVHDAQRLSIML 282
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
G I + G QS R L F+ G +LV++D +RG+D+ V+ V+NYD
Sbjct: 283 RSLGFPAIPLH---GQLSQSARLGALGKFKAGGRSILVATDVASRGLDIPSVDIVINYDI 339
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQK 492
P + K YIHR GRTARAG+ G+ TL+ + +V+ R +++++K
Sbjct: 340 PTHSKDYIHRVGRTARAGRSGKSITLVTQYDVELVLRIEQVIEK 383
>gi|325091017|gb|EGC44327.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H88]
Length = 828
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 209/440 (47%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 318 GLTSVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 373
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R ++++PTR+LA+Q C N+ A F + F L
Sbjct: 374 PTSRVVILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 409
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 410 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 433
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 434 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 478
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T + +KL ++ L+ P+ L +
Sbjct: 479 PKSRQT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKK 515
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L
Sbjct: 516 QTVGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLL 572
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K+ E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 573 GLKVTELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEI 632
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR TL
Sbjct: 633 YLHRVGRTARAGRSGRACTL 652
>gi|47682722|gb|AAH69876.1| Ddx51 protein, partial [Mus musculus]
Length = 260
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 129/228 (56%), Gaps = 17/228 (7%)
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GETRYKLPERLESYK 350
L K++ SATLTQDP KL +L L+ P +T +Y P L +
Sbjct: 18 LQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHY 77
Query: 351 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 410
+ C KPL ++ L+ + + + FT+S E++HRL L FG + + E+S
Sbjct: 78 VPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAFGG--VSVAEFSSRYGP 135
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y++TY+HR GRTARAG+
Sbjct: 136 GQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGK 195
Query: 471 LGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
G+ FTLL K + ++F +++ +A H IP L++ L Y++
Sbjct: 196 TGQAFTLLLKVQERKFLQMVSEAGVPELTHHEIPRKLLQPLVARYETA 243
>gi|118351203|ref|XP_001008880.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89290647|gb|EAR88635.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 643
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 202/465 (43%), Gaps = 113/465 (24%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L + P LK A++ M FP + I L +DL +S TGSGKT ++ +PI+
Sbjct: 195 LGLIKPLLK-AVEEMQYE--FPTNIQSL--AIPAALQGKDLLASSLTGSGKTAAFLIPIL 249
Query: 92 QTLSNRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF 150
Q +AL+V PTR+LA Q+
Sbjct: 250 QKFYRSPFTNYSKALIVTPTRELAFQI--------------------------------- 276
Query: 151 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 210
+VF + L L +GQS++ + +EL P
Sbjct: 277 ------YEVFTKLNKYTKLRACLVIGQSAMQKQEAELRGNP------------------- 311
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
++++ATPGRL+DH+ +R L++L L+ DE D+LL ++A +
Sbjct: 312 --EVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLDLGFEAAAQNI---------- 359
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
+ C ER ++ SATLT + NKL + L P
Sbjct: 360 ------------------VENCNRERQ----------TLLFSATLTSEVNKLIDIALRKP 391
Query: 331 LFLTT---GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
+ + G+T KL +++ I + L+A+ +E+ I+F + THR+
Sbjct: 392 IRIQANPDGQTNDKLIQKMLR---IQHEDFREAALLAIAAKYYKERTIIFFKTKRQTHRM 448
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
+ FG +K+ E G Q+ R + F+EGK Q L+++D +RG+D++GV V+
Sbjct: 449 AIIFGLFG---LKVCELHGDLTQNQRIQAFSDFKEGKYQYLMATDLASRGLDIQGVKAVI 505
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
N++ P+ + YIHR GRTARAG G T+ E+K KK+L++
Sbjct: 506 NFELPSEVTRYIHRVGRTARAGNEGISLTIGLDAELKTLKKMLKE 550
>gi|157376496|ref|YP_001475096.1| DEAD/DEAH box helicase [Shewanella sediminis HAW-EB3]
gi|157318870|gb|ABV37968.1| DEAD/DEAH box helicase domain protein [Shewanella sediminis
HAW-EB3]
Length = 419
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 202/461 (43%), Gaps = 120/461 (26%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L +L L +G SS P+Q I L +D+ + TG+GKT ++ALPI+Q
Sbjct: 7 ALSQKLITLLSELGYSSPTPIQA----HAIPVILAGQDIMAGAQTGTGKTAAFALPILQK 62
Query: 94 LS-----------NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
LS +++ +RALV+ PTR+LALQVN +
Sbjct: 63 LSECDVELSDTKQTVSLKPVRALVLTPTRELALQVNQS---------------------- 100
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
FA GL+ + G G+ D +
Sbjct: 101 -----------------FAKYGKDSGLNTAIVYG-------------------GVSIDAQ 124
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
L++ VDILVATPGRL+DH+ RG TL+ L +LV DE DR+L ++ + +L
Sbjct: 125 --ADALKAGVDILVATPGRLLDHLR--RGSLTLKQLNFLVFDEADRMLDMGFKDEINAIL 180
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
+ S + A TF PS F LS L QDP K
Sbjct: 181 KQVPSKRQTLLFSA-TFDPSVFA--------------------------LSKRLQQDP-K 212
Query: 322 LAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 381
L ++D + L + Y + +S +LIC L++S ++ ++F+
Sbjct: 213 LIEVDKRNTLAAKVEQVVYAVDADRKS-ELICH----------LVKSKLWQQVLIFSRKK 261
Query: 382 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
+ + + G IK + + G Q+VR K L+ F++G+IQVLV++D RG+DVE
Sbjct: 262 QGADNIAAKMVKAG---IKAQAFHGDLSQAVREKALQQFKQGEIQVLVATDVAARGLDVE 318
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 482
+ VVNY+ P + YIHR GRT RAG G TL +++
Sbjct: 319 ELKVVVNYELPFIAEDYIHRIGRTGRAGNAGLAITLYSEED 359
>gi|452823641|gb|EME30650.1| ATP-dependent RNA helicase DEAD [Galdieria sulphuraria]
Length = 558
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 218/478 (45%), Gaps = 113/478 (23%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SN 96
L VA++ +G P+Q V I L RD+C ++ TGSGKT ++A+PI++ L S
Sbjct: 110 LLVAIRQLGWEVPTPIQDKV----IPLALVGRDICASAVTGSGKTGAFAVPILEKLWRSA 165
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
V +R +V+LPTR+LALQ CK +F ++
Sbjct: 166 SKVSLVRVIVILPTRELALQ---------CKQVFTELS---------------------- 194
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K++ I A+G GLAV R + +A LQ DI++
Sbjct: 195 KNMDIDIELAIG---GLAV--------------RAEQDA------------LQRCPDIVI 225
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGR++DHI T+GF+++ + +V+DE DRLL + L +
Sbjct: 226 GTPGRIIDHIRNTKGFSVDDVEIVVLDEADRLLDLGFSEELEEI---------------- 269
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
IR C P+ ++ SAT+T +LA L L P +
Sbjct: 270 ------------IRSCS----------PKRQTLLFSATMTTSVQQLALLSLKEPANIVV- 306
Query: 337 ETRYKLPERLE-SYKLICESK---LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
+ Y++ + LE + LI + + YL+AL ++ I+F S H++ +
Sbjct: 307 DPLYEVSKTLEQEFVLISDGNNVNKRISYLLALCCRTYTQRVILFFSKRSVAHQIFII-- 364
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
FG L + E G Q R + L FR+G+ + L+ +D +RG+D+ V V+NY+ P
Sbjct: 365 -FGMLGLSAVELHGNLSQMQRMEALNRFRKGQCEFLLCTDVASRGLDIFDVRTVINYEMP 423
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHK-DEVKRFKKLLQKADNDSCPIHSIPSSLIE 509
I+TY+HR GRTARAG G+ TL+ + +R ++QK + SI S+++
Sbjct: 424 NDIRTYVHRVGRTARAGAKGKAVTLVDETSHARRLLSVIQKRSKTTLKSRSITDSVLD 481
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 193/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 62 ACETMGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QP 116
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA Q++ + F
Sbjct: 117 FFGLVLAPTRELAYQISKS---------------------------------------FE 137
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ ++G+ + VG + + L K+P I+VATPGR
Sbjct: 138 SLGASMGVRSCVIVGGMDMVSQSISLGKKPH---------------------IIVATPGR 176
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 177 LLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL-- 227
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT++ L + L +PL ++ ++Y+
Sbjct: 228 -----------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQ 258
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K LYLV LL + I+FT +V T RL LL G I +
Sbjct: 259 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 318
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P +Y+HR
Sbjct: 319 H---GQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHR 375
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 376 VGRTARAGKSGLAISFVAQYDVE 398
>gi|213410545|ref|XP_002176042.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212004089|gb|EEB09749.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 461
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 190/438 (43%), Gaps = 103/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +E I L ++D+ + TGSGKT ++A+P++Q L +V+ PTR
Sbjct: 62 FKAPSAIQKEAIPAALKQQDIIGLAQTGSGKTAAFAIPVIQALWENPCPFF-GVVLAPTR 120
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ + F A+ A+G+
Sbjct: 121 ELAYQIS---------------------------------------EQFEALGGAMGVKS 141
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + + K+P ILV TPGRLMDH+ T+G
Sbjct: 142 VVIVGGMDMVTQAVAISKKPH---------------------ILVCTPGRLMDHLENTKG 180
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L +L YLV+DE DRLL + + +L++ E R TFL
Sbjct: 181 FSLRNLKYLVMDEADRLLDMDFGPIIDKILKVI--PKERR-----TFL------------ 221
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
SAT+T KL + LH+P+ + + L+ Y L
Sbjct: 222 -------------------FSATMTSKVEKLQRASLHNPVRIAVSSKFSTVDTLLQKY-L 261
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K YLV ++ + + I+FT +V T R+ LL G I + G QS
Sbjct: 262 FFPFKHKDTYLVYIVNEMAGQSMIIFTRTVNDTQRVAILLRSLGFSAIPL---HGQLSQS 318
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L F+ G +LV++D RG+D+ V+ V+NYD P K YIHR GRTARAG+
Sbjct: 319 SRLGALNKFKSGARSILVATDVAARGLDIPLVDAVINYDIPTDSKAYIHRVGRTARAGRS 378
Query: 472 GRCFTLLHKDEVKRFKKL 489
G+ L+ + +++ F ++
Sbjct: 379 GKSIALVTQYDLEPFLRI 396
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 193/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 62 ACETMGYKAPTPIQ----RESIPLALKGRDLIGLAETGSGKTAAFALPILQALMEKP-QP 116
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA Q++ + F
Sbjct: 117 FFGLVLAPTRELAYQISKS---------------------------------------FE 137
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ ++G+ + VG + + L K+P I+VATPGR
Sbjct: 138 SLGASMGVRSCVIVGGMDMVSQSISLGKKPH---------------------IIVATPGR 176
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 177 LLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL-- 227
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT++ L + L +PL ++ ++Y+
Sbjct: 228 -----------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQ 258
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K LYLV LL + I+FT +V T RL LL G I +
Sbjct: 259 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 318
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P +Y+HR
Sbjct: 319 H---GQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHR 375
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 376 VGRTARAGKSGLAISFVAQYDVE 398
>gi|388580865|gb|EIM21177.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 581
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 208/483 (43%), Gaps = 110/483 (22%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
+ E + +P LP + E C +L D + A++ MG S + VQ
Sbjct: 30 ISEKEDTQLPELPETNTDYQDLTPEQCSFSNLDLTDG-TRSAIEEMGFSQMTEVQA---- 84
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RAVRCLRALVVLPTRDLALQV 117
+TI P + RD+ + TGSGKTL++ +P ++ LS + A+V+ PTR+LALQ
Sbjct: 85 KTIPPLMAGRDVLGAAHTGSGKTLAFLIPAIEMLSRLHFKPRNGTGAIVISPTRELALQ- 143
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
IFG+ KD+ G+ +G A
Sbjct: 144 -----------IFGV-----------------------AKDIMKNHNQTFGIIMGGA--- 166
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
K EA +LQ V++++ATPGRL+DH+ T+GF ++
Sbjct: 167 ------------NRKAEA----------DKLQKGVNLIIATPGRLLDHLQNTKGFVFSNM 204
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
L++DE DR+L ++ + ++++ ++N
Sbjct: 205 KSLIIDEADRILEIGFEEEMRQIVKILPTENRQ--------------------------- 237
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH-PLFLTTGETRYKLP-ERLESYKLICES 355
M+ SAT T LA++ L PL++ E R E+LE ++CES
Sbjct: 238 ----------TMLFSATQTTKVTDLARVSLRQGPLYINVHEERSAATNEQLEQGYVVCES 287
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
++ L L L+ ++K IVF SS S LLN+ + I + + G Q+Q R+
Sbjct: 288 DMRFLLLFTFLKKNLKKKVIVFFSSCNSVKYHGELLNY---IDIPVLDLHGKQKQQKRTN 344
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
T F +L+ +D RG+D+ V+ ++ +D P + YIHR GRTARAG+ G+
Sbjct: 345 TFFEFCNAPNGILLCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARAGKAGKSL 404
Query: 476 TLL 478
L
Sbjct: 405 LFL 407
>gi|358055869|dbj|GAA98214.1| hypothetical protein E5Q_04897 [Mixia osmundae IAM 14324]
Length = 835
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 205/456 (44%), Gaps = 105/456 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA--LVVLPTRDLAL 115
+ +TI L +D+ +S TGSGKT+++ L +++ L R + R LV+ PTR+LA+
Sbjct: 294 IQAQTIPVALMGKDIVASSNTGSGKTVAFWLGVLERLLYRDKKDARTRVLVICPTRELAV 353
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
QV HS+ + ++ + F L V
Sbjct: 354 QV------------------HSVGKALARYTDISFC---------------------LCV 374
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G S+ + +EL +RP D++V+TPGRL+DH+ T FTL+
Sbjct: 375 GGLSLKVQEAELRQRP---------------------DVVVSTPGRLIDHVRNTSTFTLD 413
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L L++DE DR+L E ++ L + I+ C
Sbjct: 414 SLEILIIDEADRILEEGFRDELTEI----------------------------IKEC--- 442
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
P R ++ SAT+T+D N+LA+L L P+ + ET + ++ + I +
Sbjct: 443 ------PRSRQ-SLLFSATITEDVNELARLSLDKPVRIKIDETGTTVESLMQEFLRIRKD 495
Query: 356 --KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 413
+ L+A+ Q + I+F S ++ HR LL G + +E G Q R
Sbjct: 496 TPASREAALLAICQRTFRGQTIIFFRSKQAAHRARILLGLCG---LAAEELHGDLSQEQR 552
Query: 414 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 473
++L+ F+EG L ++D +RG+D++GV +V+N++ P Y+HR GRTARAG GR
Sbjct: 553 LQSLQNFKEGTATHLCATDLASRGLDIKGVQSVINFEMPGSFDIYLHRVGRTARAGNAGR 612
Query: 474 CFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIE 509
TL+ + K K+ + A D +P +I+
Sbjct: 613 ALTLVGDSDRKMVKQATKAAPADRFKQRVLPPEVIK 648
>gi|225561576|gb|EEH09856.1| ATP-dependent RNA helicase DRS1 [Ajellomyces capsulatus G186AR]
Length = 829
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 208/440 (47%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 319 GLTSVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 374
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 375 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 410
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 411 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 434
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 435 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFTDELNEIL---------------TTI 479
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T + +KL ++ L+ P+ L +
Sbjct: 480 PKSRQT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKK 516
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L
Sbjct: 517 QTVGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLL 573
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K+ E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 574 GLKVTELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEI 633
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR TL
Sbjct: 634 YLHRVGRTARAGRSGRACTL 653
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 197/434 (45%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I + +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 50 IQREAIPLTIQGKDVIGLAETGSGKTAAFALPILQALLENPQRYF-ALILTPTRELAFQI 108
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 109 S---------------------------------------EQFEALGASIGVKCVVIVGG 129
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF L L
Sbjct: 130 MDMMTQSLMLAKKPH---------------------IIIATPGRLVDHLENTKGFNLRSL 168
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L ++ + +L++ +P RR
Sbjct: 169 KFLVMDEADRILNMDFEVEVDKILRV---------------IPRE-------RRT----- 201
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
++ SAT+T+ KL + L +P+ + T+Y+ E+L+ Y + K
Sbjct: 202 -----------LLFSATMTKKVQKLQRASLQNPVKVEVS-TKYQTVEKLQQYYVFIPVKF 249
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T R LL G + + + G Q+ R L
Sbjct: 250 KDVYLVHILNELSGNSFMIFCSTCNNTMRTALLLRSLGFMAVPL---HGQMSQNKRIAAL 306
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G T
Sbjct: 307 TKFKAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGISVTF 366
Query: 478 LHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 367 VTQYDVELYQRIEQ 380
>gi|452845537|gb|EME47470.1| hypothetical protein DOTSEDRAFT_146146 [Dothistroma septosporum
NZE10]
Length = 570
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 218/477 (45%), Gaps = 120/477 (25%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLS-NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
D+ +N+PTGSGKT++Y LPI++ L + A L AL+++PTR+L QV +
Sbjct: 111 DVAVNAPTGSGKTIAYLLPIIEALRRSHAPGELSALIIVPTRELVQQVAA---------- 160
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
V ++A + VG++ + DE ++I
Sbjct: 161 -----------------------------VAESLAKGSDICVGMSGSTGTFRDEQGKIIN 191
Query: 190 RPKLEAGICYDPEDVLQELQ--------------SAVDILVATPGRLMDHINATRGFTLE 235
G YDP Q++ SAV++LVATPGRL++HIN T GF L
Sbjct: 192 -----CGQRYDPAGYQQQIDDAVNGLVQHVPTYDSAVNVLVATPGRLLEHINNTPGFNLV 246
Query: 236 HLCYLVVDETDRLLREAYQAWLPTV-LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
L +LV+DE D+LL Y+ +L ++ ++L R +L R+ G
Sbjct: 247 RLTWLVIDEADKLLDNQYEGFLESLNVELERPRTTEEQDARECYL----------RQKGR 296
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--------------- 339
++++ ++ K++LSAT+T+D +KL L L P + T
Sbjct: 297 WEEWRER---KIRKIILSATMTKDISKLTTLKLRRPQMVVVRGTECEQQMIAGAELMKED 353
Query: 340 --------YKLPERLESYKL-ICESKLKPLYLVALL------QSLGEEK-------CIVF 377
++LP L Y + + + KPL LL +S +EK ++F
Sbjct: 354 GVKQTVDGFELPRTLVEYSIPVGDGAEKPLIAFELLRTQILRESDSKEKSQTDTPTVLIF 413
Query: 378 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF-REGKIQVLVSSDAMTR 436
TS ES RL LL +S V++ L+ ++ + ++VS+D R
Sbjct: 414 TSRNESATRLSHLLKGIQ------PSWSRYITTLVKTTKLRVTSKKSEPAIIVSTDRAAR 467
Query: 437 GMD-VEG--VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
G+D + G + +VV YD P +++Y+HR GRTARAG+ G+ +TL+ + E K F + +
Sbjct: 468 GLDNIAGRPITHVVQYDVPRSVESYVHRVGRTARAGRSGQAWTLVTRAEGKWFNETI 524
>gi|403347814|gb|EJY73340.1| hypothetical protein OXYTRI_05530 [Oxytricha trifallax]
Length = 508
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 210/483 (43%), Gaps = 117/483 (24%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 98
L+ AL+NMG +Q Q T+ +D+ + TGSGKT ++A+P++Q L +
Sbjct: 70 LQEALKNMGYKCPTKIQAESLQYTLKG----KDIIGLAETGSGKTAAFAIPVIQQLLDNP 125
Query: 99 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
+ A V+ PTR E+CVQ + +
Sbjct: 126 -QPFFACVMSPTR----------------------------ELCVQ-----------IAE 145
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
F AI +GL + VG + + L K P +++ T
Sbjct: 146 QFEAIGAGIGLRTAVLVGGLDMVSQAIALSKNPH---------------------VVIGT 184
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL-QLTRSDNENRFSDAST 277
PGR+ DH+ T+GF L+ L +L+ DE DRLL ++ + +L Q+ +S N T
Sbjct: 185 PGRMADHLANTKGFHLKKLKFLIFDEADRLLSMDFEKQINLILTQIPKSRN--------T 236
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
+L SAT+T KL + L+ P+ +
Sbjct: 237 YL-------------------------------FSATMTSKVQKLQRASLNDPVKIEVS- 264
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
++YK + L + K K YLV LL +K I+FT++ + +L +L + L
Sbjct: 265 SKYKTVDTLVQNYIFIPEKHKETYLVYLLTQFAGQKMIIFTTTCNQSMKLALILRN---L 321
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
K +G Q+ R L F+ + +L+++D +RG+D+ V+ V+N+D P + K
Sbjct: 322 NFKAVNINGQLTQTQRLSALNKFKANERNILIATDVASRGLDIPEVDFVINFDIPQHSKD 381
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN--------DSCPIHSIPSSLIE 509
Y+HR GRTARAG+ G+ T + + +V+ F+K+ Q D DS + S++E
Sbjct: 382 YVHRVGRTARAGKTGKAITFVTQYDVETFQKIEQLIDKKLDEYPGLDSKAALILTDSVVE 441
Query: 510 SLR 512
+ R
Sbjct: 442 ATR 444
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 192/430 (44%), Gaps = 105/430 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I L +DL + TGSGKT ++ALPI+Q L A + A V+ PTR+LA+Q
Sbjct: 35 IQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE-APQAFFACVLSPTRELAIQ- 92
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
IAE F A+ +G+ + VG
Sbjct: 93 --------------------IAEQ------------------FEALGSGIGIKCAVLVGG 114
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L KRP ++V TPGRL+DH+ T+GF+L L
Sbjct: 115 VDMVQQAINLAKRP---------------------HVVVGTPGRLVDHLTNTKGFSLRTL 153
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DRLL E ++ + +L NE
Sbjct: 154 KYLVLDEADRLLNEDFEKSIDEIL------NE---------------------------- 179
Query: 298 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
PR + L SAT+T+ KL + L +P+ + T+Y + L+ +K
Sbjct: 180 -----IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA-TKYSTVDTLKQQYCFIPAK 233
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K YLV +L + +VFT + ++T L +L + G I I SG Q+ R
Sbjct: 234 YKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPI---SGQMTQAKRLGA 290
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ G+ +L+ +D +RG+D+ V+ V+NYD P+ K YIHR GRTARAG+ G +
Sbjct: 291 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAIS 350
Query: 477 LLHKDEVKRF 486
L+++ E++ +
Sbjct: 351 LVNQYELEWY 360
>gi|392578431|gb|EIW71559.1| hypothetical protein TREMEDRAFT_27480 [Tremella mesenterica DSM
1558]
Length = 786
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 210/492 (42%), Gaps = 112/492 (22%)
Query: 33 PCLDPRLKVALQNMGIS--------SLFPVQVAVWQETIGP-GLFERDLCINSPTGSGKT 83
P DP L + M +S SL + Q P L RD+ ++ TGSGKT
Sbjct: 198 PTTDPTLPTSFSTMNLSRPLLRALTSLNLITPTPIQARAIPLALLGRDILGSAVTGSGKT 257
Query: 84 LSYALPIVQTLS----NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIA 139
++ +PI++ L+ R + R L++ PTR+LA+Q
Sbjct: 258 AAFMVPILERLTYRERGRGGQACRVLILCPTRELAVQ----------------------- 294
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 199
C +F L + GL++ A+ L G+
Sbjct: 295 --CEEFGKKL--------------STQGGLNIRFAL-----------------LVGGLSL 321
Query: 200 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 259
+ + Q L++ DIL+ATPGRL+DH+ T FTL L LV+DE DR+L + L
Sbjct: 322 NAQ--AQNLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELNE 379
Query: 260 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 319
+ +R C P R M+ SAT+T
Sbjct: 380 I----------------------------VRSC---------PRGRQT-MLFSATMTDSV 401
Query: 320 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 379
++L +L L P+ L R + + I + L+AL + E+CI+F
Sbjct: 402 DELVKLSLDKPIRLFVDPKRNTAIGLTQEFVRIKSDDTRSPSLLALCKRTVRERCIIFFR 461
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
S H++ + FG +K E G Q R L+ F+ GK+ L+++D +RG+D
Sbjct: 462 SKALAHQMRVV---FGLCGLKAAELHGNLSQEQRLHALEEFKLGKVDYLLATDLASRGLD 518
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 499
++GV V+NYD P + Y HR GRTARAG+ GR TL+ + + K K ++++++ D
Sbjct: 519 IKGVETVINYDMPGQLAQYTHRVGRTARAGRKGRSITLVGEADRKLLKAVIKQSEADEIR 578
Query: 500 IHSIPSSLIESL 511
IPS + ++
Sbjct: 579 HRIIPSEAVTAM 590
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 193/453 (42%), Gaps = 107/453 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV E L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 130 PQIVEACTNMGFKHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWD 185
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A V+ PTR+LA Q++ QV
Sbjct: 186 NP-KPFFACVLAPTRELAYQISQ-----------------------------------QV 209
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ A+ +G+ VG + + L KRP ++V
Sbjct: 210 E----ALGSTIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIV 244
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL DH+ T+GF+L L YLV+DE DRLL + + +LQ
Sbjct: 245 ATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ-------------- 290
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
S+ RR M+ SAT+T KL + L +P+ +
Sbjct: 291 --------SIPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV- 325
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T+Y L+ + L K YLV L IVFT +V + RL LL G
Sbjct: 326 DTKYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGF 385
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K
Sbjct: 386 PAIPLH---GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSK 442
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
YIHR GRTARAG+ GR TL+ + +V+ +++
Sbjct: 443 DYIHRVGRTARAGRSGRSVTLVTQYDVELLQRI 475
>gi|242042443|ref|XP_002468616.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
gi|241922470|gb|EER95614.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
Length = 454
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 201/460 (43%), Gaps = 113/460 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 115
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q IAE F A+ A+GL + V
Sbjct: 110 Q---------------------IAEQ------------------FEALGSAIGLRCSVLV 130
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G ++ + KRP I+V TPGRL+DH+ T+GF+L+
Sbjct: 131 GGVDRVQQVLSIGKRPH---------------------IVVGTPGRLLDHLTETKGFSLK 169
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
+ YLV+DE D+LL ++ L +L+ D TFL
Sbjct: 170 KIKYLVLDEADKLLNVEFEKSLDDILREIPKDRR-------TFL---------------- 206
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ NKL + L +P + ++Y + L+ +
Sbjct: 207 ---------------FSATMTKKVNKLQRACLRNPAKVEAA-SKYSTVDSLKQEFYFVPA 250
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K YL+ +L + ++F + EST L +L + G +K SG Q R
Sbjct: 251 DDKDCYLLHVLNERQDSMIMIFVRTCESTRLLALMLRNLG---LKAMSISGQMSQDKRLG 307
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+ G
Sbjct: 308 ALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAV 367
Query: 476 TLLHKDEVKRF---KKLL------QKADNDSCPIHSIPSS 506
+L+++ E + F +KLL +K D D I P S
Sbjct: 368 SLVNQYEAQWFVLIEKLLGKQIDQRKVDRDEVMILKGPIS 407
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 193/453 (42%), Gaps = 107/453 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV E L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 124 PQIIEACTNMGFQHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWD 179
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A V+ PTR+LA Q++ QV
Sbjct: 180 NP-KPFFACVLAPTRELAYQISQ-----------------------------------QV 203
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ A+ +G+ VG + + L KRP ++V
Sbjct: 204 E----ALGSTIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIV 238
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL DH+ T+GF+L L YLV+DE DRLL + + +LQ
Sbjct: 239 ATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ-------------- 284
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
S+ RR M+ SAT+T KL + L +P+ +
Sbjct: 285 --------SIPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV- 319
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T+Y L+ + L K YLV L IVFT +V + RL LL G
Sbjct: 320 DTKYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGF 379
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K
Sbjct: 380 PAIPLH---GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSK 436
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
YIHR GRTARAG+ GR TL+ + +V+ +++
Sbjct: 437 DYIHRVGRTARAGRSGRSVTLVTQYDVELLQRI 469
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 193/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 66 ACETMGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QP 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L++ PTR+LA Q++ + F
Sbjct: 121 FFGLILAPTRELAYQISKS---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ ++G+ + VG + + L K+P I+VATPGR
Sbjct: 142 SLGASLGVRSCVIVGGMDMVSQSISLGKKPH---------------------IIVATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 181 LLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL-- 231
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT++ L + L +PL ++ ++Y+
Sbjct: 232 -----------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K LYLV LL + I+FT +V T RL LL G I +
Sbjct: 263 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P +Y+HR
Sbjct: 323 H---GQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 380 VGRTARAGKSGLAISFVAQYDVE 402
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 191/438 (43%), Gaps = 102/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ + ++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR
Sbjct: 78 YKTPTGIQAQSIPVALQGRDVIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTR 136
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ F A+ + L
Sbjct: 137 ELAAQIGQ---------------------------------------TFEALGALISLRC 157
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P ++VATPGRL+DH+ T+G
Sbjct: 158 AVIVGGLDMVPQAVALGKKPH---------------------VIVATPGRLVDHLEKTKG 196
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 197 FSLRTLKYLVLDEADRLLDMDFGESIEKLLK---------------FIPRE-------RR 234
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L P+ ++ ++Y+ L+ + +
Sbjct: 235 T----------------YLFSATMSSSVESLQRASLRDPVRVSVSASKYQTVSTLKQHYV 278
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K YL+ ++ + CIVFT +V T R LL G I + G QS
Sbjct: 279 FIPHKRKDTYLIHIINEFAGKSCIVFTRTVYETQRCAVLLRTLGFGAIPLH---GQLSQS 335
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR G ++LV++D RG+D+ V+ ++NYD P+ KTYIHR GRTARAG+
Sbjct: 336 ARLGALNKFRGGTREILVATDVAARGLDIPKVDVILNYDIPSDSKTYIHRVGRTARAGKS 395
Query: 472 GRCFTLLHKDEVKRFKKL 489
G +++ + +++ F ++
Sbjct: 396 GVAISIVTQFDIELFTRI 413
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 194/434 (44%), Gaps = 107/434 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ F A+ +GL V + V
Sbjct: 127 QIGQQ---------------------------------------FEALGSGIGLIVAVIV 147
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 148 GGVDMAAQAMALARRPH---------------------IIVATPGRLVDHLENTKGFNLK 186
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 187 ALKFLIMDEADRILNMDFEVELDKILKVIPRERR-------TYL---------------- 223
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ +KL + L P ++ TRYK + L+ + + +
Sbjct: 224 ---------------FSATMTKKVSKLERASLRDPARVSI-STRYKTVDNLKQHYIFVPN 267
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YLV LL IVF ++ +T ++ +L G + + G Q R
Sbjct: 268 KYKETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPL---HGQMSQEKRLG 324
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
+L F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G
Sbjct: 325 SLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAI 384
Query: 476 TLLHKDEVKRFKKL 489
T++ + +V+ ++K+
Sbjct: 385 TVVTQYDVEAYQKI 398
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 203/459 (44%), Gaps = 108/459 (23%)
Query: 31 HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPI 90
L + P L+ AL+ M +Q E + + RD+ + TGSGKT+++ALPI
Sbjct: 19 ELGVIGPLLE-ALEQMNFKKPTDIQA----EALPHAISGRDIIGVAETGSGKTVAFALPI 73
Query: 91 VQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF 150
+Q L + L A V+ PTR+LA Q++ QF+SL
Sbjct: 74 LQRLWEEP-KGLFACVLAPTRELAYQISQ------------------------QFESL-- 106
Query: 151 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 210
A+G+ + VG ++ D+ L KRP
Sbjct: 107 -------------GSAIGVRCAVIVGGMNMVDQAVALAKRPH------------------ 135
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
I+VATPGRL DH+ T+GF+L + +LV+DE DRLL + + +L++ +
Sbjct: 136 ---IVVATPGRLNDHLENTKGFSLRGIKFLVLDEADRLLDMDFGPIIDKILKVIPKER-- 190
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
+T+L SAT+T KL + L +P
Sbjct: 191 -----TTYL-------------------------------FSATMTTKVAKLQRASLTNP 214
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + + +Y L Y L K K + L+ + +L + I+FT +V RL +
Sbjct: 215 VRVEVSK-KYTTVSTLLQYYLFIPYKQKEVNLIHMCNTLSQNSIIIFTRTVMDCQRLALI 273
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L G + + G QS R L F+ G +LV++D +RG+D+ V+ V+NYD
Sbjct: 274 LKTLGFSSVPL---HGQLSQSARLGALAKFKSGGRNILVATDIASRGLDIPSVDAVINYD 330
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
P++ K YIHR GRTARAG+ G TL+ + +V+ +++
Sbjct: 331 IPSHSKDYIHRVGRTARAGRAGNSITLVTQYDVELIQRI 369
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 214/481 (44%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q E I P L +D+ + TGSGKT ++A+PI+ L
Sbjct: 112 LVPELIEACENLKYSKPTPIQA----EAIPPALEGKDIIGLAQTGSGKTAAFAIPILNQL 167
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + A V+ PTR+LA
Sbjct: 168 WHDQ-QPYYACVLAPTRELA---------------------------------------Q 187
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ A+G+ VG ++ D+ +L+++P I
Sbjct: 188 QIKETFDSLGGAMGVRTTCIVGGMNMIDQARDLMRKPH---------------------I 226
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF++ L +LV+DE DRLL + L +L++ +
Sbjct: 227 IIATPGRLMDHLENTKGFSMRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQGR----- 281
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T +KL + L +P+
Sbjct: 282 -TTYL-------------------------------FSATMTSKIDKLQRASLTNPVKCA 309
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
T+Y+ + L ++ LK +L+ LL + IVFT + + R+ TL N
Sbjct: 310 VS-TKYQTVDTLIQTLMVVPGGLKNTFLIYLLNEFLGKTAIVFTRTKANAERIATLCNL- 367
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R+ L F+ G+ +LV++D RG+D+ V+ V+NYD P
Sbjct: 368 --LEFSATALHGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVD 425
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R + +L + P ++ +I SL
Sbjct: 426 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGR----KLPKENVDKGVILSL 481
Query: 512 R 512
R
Sbjct: 482 R 482
>gi|57529371|ref|NP_001006293.1| probable ATP-dependent RNA helicase DDX27 [Gallus gallus]
gi|53130268|emb|CAG31463.1| hypothetical protein RCJMB04_6k21 [Gallus gallus]
Length = 758
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 221/504 (43%), Gaps = 122/504 (24%)
Query: 22 SLFEDCPL--DHLPCLD-----PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
S FED D+L D P LK A+ +G P+Q A I GL +D+C
Sbjct: 168 SFFEDASEYDDNLSFQDMNLSRPLLK-AITALGFKQPTPIQKAC----IPVGLLGKDICA 222
Query: 75 NSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+ TG+GKT ++ LP+++ L R R LV++PTR+L +QV
Sbjct: 223 CAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQV--------------- 267
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 192
HS+ + QF S+ AVG GL V A
Sbjct: 268 ---HSVTKQLAQFSSV-------------TTCLAVG---GLDVKTQEAA----------- 297
Query: 193 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 252
L+S DIL+ATPGRL+DH++ F L + L++DE DR+L E
Sbjct: 298 ---------------LRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEY 342
Query: 253 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 312
++ + +++L C R M+ S
Sbjct: 343 FEEQMKEIIRL----------------------------CSRHRQ----------TMLFS 364
Query: 313 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLG 370
AT+T++ LA + L +P + P + + I ++ + + ALL
Sbjct: 365 ATMTEEVKDLASVSLKNPTRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLTRTF 424
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 430
+ ++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV+
Sbjct: 425 PDHVMLFTQTKKQAHRMHILLGLMG---LRVGELHGNLSQAQRLEALRRFKDEQIDILVA 481
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+D RG+D+EGV V+N+ P K Y+HR GRTARAG+ GR +L+ ++E K K+++
Sbjct: 482 TDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIV 541
Query: 491 QKADNDSCPIHS--IPSSLIESLR 512
+ A P+ + +P +I R
Sbjct: 542 KAA---KTPVKARILPQDVILKFR 562
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 213/479 (44%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ P+Q ++I P L +D+ + TGSGKT ++A+PI+ +L +
Sbjct: 76 PELIQACKNLNYEKPTPIQ----SKSIPPALNGKDIIGLAQTGSGKTAAFAIPILNSLWH 131
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A ++ PTR+LA Q+
Sbjct: 132 DQLPYY-ACILSPTRELA---------------------------------------QQI 151
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 152 KETFDSLGSLMGVRTVCIVGGMNMMDQARDLMRKPH---------------------III 190
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ TRGF+L L YLV+DE DRLL + L +L++ ++ +
Sbjct: 191 ATPGRLMDHLENTRGFSLRKLRYLVMDEADRLLDMEFGPVLDRILKILPTEGR------T 244
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
T+L SAT+T +KL + L +P+
Sbjct: 245 TYL-------------------------------FSATMTSKIDKLQRASLTNPVKCAVS 273
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK +L+ LL + I+FT + + R+ L N
Sbjct: 274 -NKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFHGKTFIIFTRTKANAERIAGLANL--- 329
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R+ L F+ GK +LV++D RG+D+ V+ V+NYD P K
Sbjct: 330 LEFNATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSK 389
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ +I SLR
Sbjct: 390 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKDIILSLR 444
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 193/453 (42%), Gaps = 107/453 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV E L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 113 PQIVEACTNMGFKHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWD 168
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A V+ PTR+LA Q++ QV
Sbjct: 169 NP-KPFFACVLAPTRELAYQISQ-----------------------------------QV 192
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ A+ +G+ VG + + L KRP ++V
Sbjct: 193 E----ALGSTIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIV 227
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL DH+ T+GF+L L YLV+DE DRLL + + +LQ
Sbjct: 228 ATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ-------------- 273
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
S+ RR M+ SAT+T KL + L +P+ +
Sbjct: 274 --------SIPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV- 308
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T+Y L+ + + K YLV L IVFT +V + RL LL G
Sbjct: 309 DTKYTTVSTLKQHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGF 368
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K
Sbjct: 369 PAIPLH---GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSK 425
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
YIHR GRTARAG+ GR TL+ + +V+ +++
Sbjct: 426 DYIHRVGRTARAGRSGRSVTLVTQYDVELLQRI 458
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 194/434 (44%), Gaps = 107/434 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALEGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ F A+ +GL V + V
Sbjct: 127 QIGQQ---------------------------------------FEALGSGIGLIVAVIV 147
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 148 GGVDMAAQAMALARRPH---------------------IIVATPGRLVDHLENTKGFNLK 186
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 187 ALKFLIMDEADRILNMDFEVELDKILKVIPKERR-------TYL---------------- 223
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ +KL + L P ++ TRYK + L+ + + +
Sbjct: 224 ---------------FSATMTKKVSKLERASLRDPARVSIS-TRYKTVDNLKQHYIFIPN 267
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YLV LL IVF ++ +T ++ +L G + + G Q R
Sbjct: 268 KYKETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPL---HGQMSQEKRLG 324
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
+L F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G
Sbjct: 325 SLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAI 384
Query: 476 TLLHKDEVKRFKKL 489
T++ + +V+ ++K+
Sbjct: 385 TVVTQYDVEAYQKI 398
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 192/448 (42%), Gaps = 106/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A N+G + P+Q ++I L RD+ + TGSGKT ++ALP++Q L + +
Sbjct: 66 ACANLGYTKPTPIQA----QSIPHALANRDIIGLAETGSGKTAAFALPVIQALLEKP-QA 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA Q+ F
Sbjct: 121 FFGLVLAPTRELAAQIGQQ---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L + VG + + L K+P +++ATPGR
Sbjct: 142 ALGSLISLRTAVIVGGLDMVAQAIALGKKPH---------------------VIIATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 181 LVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK---------------FVPR 225
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L P+ ++ +Y+
Sbjct: 226 E-------RRT----------------FLFSATMSSKIESLQRASLRDPVRVSISSNKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L Y L K ++L+ LL +K ++FT +V T RL LL G I +
Sbjct: 263 TVSTLLQYYLFIPHTQKDVHLIYLLNEHAGKKIMIFTRTVAETQRLAILLRSLGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G Q+ R L FR G +LV++D RG+DV V+ VVN+D P KT+IHR
Sbjct: 323 H---GQLNQTARLGALNKFRTGTRSILVATDVAARGLDVPAVDVVVNHDLPQDSKTFIHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G +L+ + +++ F ++
Sbjct: 380 IGRTARAGKSGIALSLVTQYDLEIFLRI 407
>gi|398407893|ref|XP_003855412.1| hypothetical protein MYCGRDRAFT_68754 [Zymoseptoria tritici IPO323]
gi|339475296|gb|EGP90388.1| hypothetical protein MYCGRDRAFT_68754 [Zymoseptoria tritici IPO323]
Length = 736
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 212/468 (45%), Gaps = 110/468 (23%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQVNSARCKYCCKNI 129
D+ +++ TGSGKT++Y LP+++ L A R L ALVV+PTR+L +QV +A CK
Sbjct: 297 DVAVSAATGSGKTIAYLLPMIEALRRNATRGRLGALVVVPTRELVVQV-AAVADSLCKG- 354
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
C GL VG+A G DE +
Sbjct: 355 ------------C-------------------------GLKVGMATGTGKFKDEQDHAKE 377
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
++ I + V SAVDILVATPGRL++HI++T GF L +L +L++DE D+LL
Sbjct: 378 EQRMRDTIHGITQHVAT-YDSAVDILVATPGRLLEHISSTPGFNLVYLQWLIIDEADKLL 436
Query: 250 REAYQAWLPTV---LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 306
Y+ +L ++ L RS +E + + +R G+ + D RL
Sbjct: 437 DNQYEGFLDSLNAELARPRSIHEQDVRE------------QYLRSKGM---WDDVRERRL 481
Query: 307 VKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GETR----------YK 341
K+VLSAT+T+D +KL L L P + G+ R ++
Sbjct: 482 RKVVLSATMTRDISKLTSLRLRRPTMIAVRGSEGIDAQARPGARGDGRDDGFRENASGFE 541
Query: 342 LPERLESYKL-ICESKLKPLYLVALLQSLGEEKCI-VFTSSVESTHRLCTLLNHFGELRI 399
LP L Y + + + KPL S + + +FT+S ES +RL LL
Sbjct: 542 LPRTLIEYCVPVGDGSEKPLVRHRKDSSQPQAPTVLIFTASNESVNRLSHLLK------- 594
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQ---------VLVSSDAMTRGMDV---EGVNNVV 447
+IK + R TL + GK + V+VS+D RG+D + +V+
Sbjct: 595 EIKPS-----WARRITTLVKLKPGKARITAKADESAVVVSTDRAARGLDSFSNRPITHVI 649
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
YD P + YIHR GRTARAG+ G +TL E + F + KA N
Sbjct: 650 QYDVPRSLTGYIHRVGRTARAGRDGDAWTLYTHSEARWFVNEITKASN 697
>gi|240274680|gb|EER38196.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H143]
Length = 828
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 207/440 (47%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 318 GLTFVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 373
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R ++++PTR+LA+Q C N+ A F + F L
Sbjct: 374 PTSRVVILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 409
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 410 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 433
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 434 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 478
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T + +KL ++ L+ P+ L +
Sbjct: 479 PKSRQT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKK 515
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L
Sbjct: 516 QTVGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLL 572
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K+ E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 573 GLKVTELHGSMSQEQRIKSVEGFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEI 632
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR TL
Sbjct: 633 YLHRVGRTARAGRSGRACTL 652
>gi|115454521|ref|NP_001050861.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|75327677|sp|Q7Y183.1|RH10_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|31126733|gb|AAP44655.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|53370642|gb|AAU89137.1| DEAD/DEAH box helicase domain containing protein [Oryza sativa
Japonica Group]
gi|108710302|gb|ABF98097.1| ATP-dependent RNA helicase DDX47, putative, expressed [Oryza sativa
Japonica Group]
gi|113549332|dbj|BAF12775.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|125545183|gb|EAY91322.1| hypothetical protein OsI_12939 [Oryza sativa Indica Group]
gi|215695397|dbj|BAG90588.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 196/477 (41%), Gaps = 108/477 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-S 95
P L A MG +Q E I L RDL TGSGKT ++ALPI+Q L
Sbjct: 50 PELVAACDAMGWKEPTRIQA----EAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLK 105
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
+ L A V+ PTR+LA Q+
Sbjct: 106 QDKPQALFACVLSPTRELAFQIGQQ----------------------------------- 130
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
F A+ A+GLS + VG + L KRP I+
Sbjct: 131 ----FEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPH---------------------IV 165
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
V TPGRL+DH+ T+GF+L L YLV+DE D+LL +Q L +L + +
Sbjct: 166 VGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERR------ 219
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
TFL SAT+T +KL + L +P+ +
Sbjct: 220 -TFL-------------------------------FSATMTNKVSKLQRACLRNPVKVEV 247
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
++Y + L + K +LV +L L ++F + EST L L +
Sbjct: 248 A-SKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRN-- 304
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
LR K SG Q R L F+ +L+ +D +RG+D++GV+ V+NYD P
Sbjct: 305 -LRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNS 363
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
K Y+HR GRTARAG G +L+++ E F K+++K P + ++ I LR
Sbjct: 364 KDYVHRVGRTARAGNTGYAVSLVNQYEAMWF-KMIEKLLGYEIPDRKVDNAEIMILR 419
>gi|170046412|ref|XP_001850760.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869183|gb|EDS32566.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 438
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 197/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R A+++ PTR+LA Q+
Sbjct: 22 IQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-AVILTPTRELAYQI 80
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 81 S---------------------------------------EQFEALGASIGVKCCVIVGG 101
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L ++P I++ATPGRL+DH+ T+GF L+ +
Sbjct: 102 MDMVSQALQLARKP---------------------HIIIATPGRLVDHLENTKGFNLKAV 140
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ + TFL
Sbjct: 141 KYLVMDEADRILNLDFEVELDKILKVLPRERR-------TFL------------------ 175
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + ++Y+ E+L Y + +K
Sbjct: 176 -------------FSATMTKKVKKLERASLKDPVKVEVS-SKYQTVEKLLQYYVFIPAKF 221
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T R +L G + + G Q+ R +L
Sbjct: 222 KDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMSQNKRLASL 278
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ Q+L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 279 NKFKGKDRQILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRAGKAVTF 338
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 339 VTQYDVELYQRI 350
>gi|212722850|ref|NP_001131651.1| uncharacterized protein LOC100193011 [Zea mays]
gi|194692160|gb|ACF80164.1| unknown [Zea mays]
gi|413934956|gb|AFW69507.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 455
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 199/460 (43%), Gaps = 113/460 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 115
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q IAE F A+ A+GL + V
Sbjct: 110 Q---------------------IAEQ------------------FEALGSAIGLRCSVLV 130
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G ++ + KRP I+V TPGRL+DH+ T+GF+L+
Sbjct: 131 GGVDRVQQVLSIGKRPH---------------------IVVGTPGRLLDHLTETKGFSLK 169
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
+ YLV+DE D+LL ++ L +L D TFL
Sbjct: 170 KIKYLVLDEADKLLNVEFEKSLDDILSEMPKDRR-------TFL---------------- 206
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ NKL + L +P + ++Y + L+ +
Sbjct: 207 ---------------FSATMTKKVNKLQRACLRNPAKVEV-SSKYSTVDSLKQEFYFVPA 250
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K YL+ +L E ++F + EST L +L + G +K SG Q R
Sbjct: 251 DDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLG---LKAMSISGQMSQDKRLG 307
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+ G
Sbjct: 308 ALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAV 367
Query: 476 TLLHKDEVKRF--------KKLLQ-KADNDSCPIHSIPSS 506
+L+++ E + F KK+ Q K D D I P S
Sbjct: 368 SLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPIS 407
>gi|154282923|ref|XP_001542257.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
gi|150410437|gb|EDN05825.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
Length = 1466
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 212/454 (46%), Gaps = 109/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 319 GLTSVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 374
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 375 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 410
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 411 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 434
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 435 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 479
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T + +KL ++ L P+ L +
Sbjct: 480 PKSRQT-----------------------MLFSATMTNNVDKLIRVGLSRPVRLMVDAKK 516
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ +++ IVF S + HR+ + FG L
Sbjct: 517 QTVGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRII---FGLL 573
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K+ E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P
Sbjct: 574 GLKVTELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHAI 633
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG+ GR TL + + K K ++
Sbjct: 634 YLHRVGRTARAGRSGRACTLAAEPDRKVVKAAVK 667
>gi|195621064|gb|ACG32362.1| ATP-dependent RNA helicase DDX47 [Zea mays]
Length = 455
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 199/460 (43%), Gaps = 113/460 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNR-AVRCLRALVVLPTRDLAL 115
+ E I L +DL + TGSGKT ++ALPI+Q L SNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q IAE F A+ A+GL + V
Sbjct: 110 Q---------------------IAEQ------------------FEALGSAIGLRCSVLV 130
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G ++ + KRP I+V TPGRL+DH+ T+GF+L+
Sbjct: 131 GGVDRVQQVLSIGKRPH---------------------IVVGTPGRLLDHLTETKGFSLK 169
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
+ YLV+DE D+LL ++ L +L D TFL
Sbjct: 170 KIKYLVLDEADKLLNVEFEKSLDDILSEMPKDRR-------TFL---------------- 206
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ NKL + L +P + ++Y + L+ +
Sbjct: 207 ---------------FSATMTKKVNKLQRACLRNPAKVEV-SSKYSTVDSLKQEFYFVPA 250
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K YL+ +L E ++F + EST L +L + G +K SG Q R
Sbjct: 251 DDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLG---LKAMSISGQMSQDKRLG 307
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L F+ +L+ +D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+ G
Sbjct: 308 ALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPINSKDYVHRVGRTARAGRSGYAV 367
Query: 476 TLLHKDEVKRF--------KKLLQ-KADNDSCPIHSIPSS 506
+L+++ E + F KK+ Q K D D I P S
Sbjct: 368 SLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPIS 407
>gi|260798638|ref|XP_002594307.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
gi|229279540|gb|EEN50318.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
Length = 563
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 209/472 (44%), Gaps = 115/472 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
A+ M P+Q A TI L +D+C + TG+GKT ++ LP+++ L R
Sbjct: 10 AISQMKFHHPTPIQKA----TIPVALLGKDVCACAATGTGKTAAFMLPVLERLLYKPRQA 65
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LV+ PTR+LA+QV H ++ QF S+
Sbjct: 66 PVTRVLVLAPTRELAVQV------------------HQVSRQLAQFTSV----------- 96
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ LA G I + EA + P D+++ATP
Sbjct: 97 ----------EISLAAGGLDIRTQ----------EAALRLGP-----------DVVIATP 125
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL+DH++ T F L+ + L++DE DR+L E ++ + +++L
Sbjct: 126 GRLIDHLHNTPSFDLKSIEVLILDEADRMLDEFFEEQMNEIIRL---------------- 169
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE-T 338
C +R M+ SAT++ LA + L +P+ L E T
Sbjct: 170 ------------CARKRQ----------TMLFSATMSDQVKDLAAVSLENPVKLFVNENT 207
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
R E ++ + ++A + CIVF + HR+ +L G L
Sbjct: 208 DVAFNLRQEFIRIRPNREGDREAIIAA--RTFHDHCIVFIQTKLQAHRMHIIL---GLLG 262
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E G Q+ R +TLK F++ ++ VL+++D RG+D++GV V+N+ P+ +K Y
Sbjct: 263 LNVGELHGNLSQTQRLETLKRFKDAEVDVLLATDLAARGLDIQGVKTVINFTMPSTLKHY 322
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 508
IHR GRTARAG+ GR TL+ + E + K +++ A N P+ S +P +I
Sbjct: 323 IHRVGRTARAGKSGRAVTLVGEKERRYLKDVVKNARN---PVKSRVVPQEVI 371
>gi|56202232|dbj|BAD73664.1| putative DEAD box protein [Oryza sativa Japonica Group]
gi|56202381|dbj|BAD73793.1| putative DEAD box protein [Oryza sativa Japonica Group]
Length = 423
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 191/449 (42%), Gaps = 94/449 (20%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR-CLRALVVLPTRDLALQVNS 119
E I L RD+ TGSGKT ++ALPI+Q L R C A V+ PTR+LA+Q+
Sbjct: 12 EVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQIAK 71
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
F A+ A+ L + +SS
Sbjct: 72 Q---------------------------------------FEALGSAISLQCSVVWWRSS 92
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
A L K +D + +E S V TPGRL+DH+ T+GF+ L Y
Sbjct: 93 RACLPEHLRK--------GFDSWQLWKERNSRV----GTPGRLLDHLTNTKGFSFNKLKY 140
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LV+DE D LL+ +Q + +L + + TFL
Sbjct: 141 LVLDEADDLLKVDFQKAVDDILNVIPKERR-------TFL-------------------- 173
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 359
SAT+T+ KL + L +P+ + ++Y L + L + +K K
Sbjct: 174 -----------FSATMTEKVKKLRRACLKNPVKVEVA-SKYSLVDTLRQDLYVVPAKYKD 221
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
YL+ +L + +VF + EST L +L + LR K SG Q R L
Sbjct: 222 CYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN---LRFKAISISGQMSQDKRLGALNR 278
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
FR +LV +D +RG+D++GV+ V+NYD P K YIHR GRTARAGQ G +L++
Sbjct: 279 FRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVSLVN 338
Query: 480 KDEVKRFKKLLQKADNDSCPIHSIPSSLI 508
+ E + FK Q + P + + I
Sbjct: 339 QFEGEFFKLTEQFLGGEEIPARKVDADEI 367
>gi|384487072|gb|EIE79252.1| hypothetical protein RO3G_03957 [Rhizopus delemar RA 99-880]
Length = 462
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 190/439 (43%), Gaps = 107/439 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I + RD+ + TGSGKT ++A+PI+Q L + A V+ PTR+LA Q+
Sbjct: 49 IQKESIPWAIEGRDIIGLAQTGSGKTAAFAIPIIQRLWQNP-QAFFACVLAPTRELAYQI 107
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F ++ +G+ + VG
Sbjct: 108 ---------------------------------------AETFESLGSVIGVRCAVIVGG 128
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L KRP I+V TPGRL DH+ T+GF L+HL
Sbjct: 129 MDMMTQSIALAKRPH---------------------IIVCTPGRLQDHLENTKGFNLKHL 167
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DRLL + + +L++ + +TFL
Sbjct: 168 KYLVMDEADRLLDLDFGPKIDQILKVIPRER-------NTFL------------------ 202
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + LH P+ + T+Y + L Y L K
Sbjct: 203 -------------FSATMTTKVAKLQRASLHKPVKVEVA-TKYSTVKTLLQYYLFFPLKH 248
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K Y+V LL L I+FT + T ++ +L + G I + G Q+ R L
Sbjct: 249 KDCYMVYLLNELAGNSTIIFTRTCSDTQKIAIMLRNLGFGAIPL---HGQLPQAKRLGAL 305
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +LV++D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G+ T
Sbjct: 306 NKFKAGARNILVATDVASRGLDIPLVDVVINYDVPQSSKDYIHRVGRTARAGRSGKSVTF 365
Query: 478 LHKDEVKRFKKLLQKADND 496
+ + +V +L+Q+ + D
Sbjct: 366 VTQYDV----ELIQRIEKD 380
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 189/443 (42%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QS 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L++ PTR+LA Q++ + F
Sbjct: 121 FFGLILAPTRELAFQISKS---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ + + + VG + + L K+P I+VATPGR
Sbjct: 142 SLGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 181 LLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKV---------------LPR 225
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 226 E-------RRT----------------FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 323 H---GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 380 VGRTARAGKSGVAISFVTQYDVE 402
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 187/427 (43%), Gaps = 102/427 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALPI+Q L ++ + L ALV+ PTR+LA Q+
Sbjct: 88 IQEQSIPLALQGRDIIGIAETGSGKTAAFALPILQALLDKP-QPLFALVLAPTRELAAQI 146
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
A F A+ + L L +G
Sbjct: 147 TQA---------------------------------------FEALGSLISLRCALILGG 167
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P ++VATPGRL+DH+ T+GF+L +L
Sbjct: 168 LDMVQQAIALGKKPH---------------------VVVATPGRLLDHLEKTKGFSLRNL 206
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DRLL + L +L+ FLP RR
Sbjct: 207 KYLVMDEADRLLDMDFGPILEKILK---------------FLPRE-------RRT----- 239
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT++ L + L PL ++ ++Y+ L L
Sbjct: 240 -----------FLFSATMSSKVESLQRASLRDPLKVSISSSKYQTVATLVQNYLFIPHMH 288
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YL+ L + I+FT +V T R+ LL G I + + GL QS R L
Sbjct: 289 KDTYLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL--HGGLS-QSARLGAL 345
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+ G ++
Sbjct: 346 NKFRAGSRNILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRTARAGKSGHAISI 405
Query: 478 LHKDEVK 484
+ + +++
Sbjct: 406 VTQYDIE 412
>gi|148235819|ref|NP_001089455.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Xenopus laevis]
gi|66910710|gb|AAH97561.1| MGC114699 protein [Xenopus laevis]
Length = 758
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 223/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ M + P+Q A I GL +D+C
Sbjct: 175 SQYDESLTFQDMNLSR-----PLLK-AISAMSFTQPTPIQKAC----IPVGLLGKDICAC 224
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ LP+++ L R R LV++PTR+L +QV
Sbjct: 225 AATGTGKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQV---------------- 268
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
H++ QF + AVG GL V A
Sbjct: 269 --HAVTRQLAQFTEV-------------TTCLAVG---GLDVKTQEAA------------ 298
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
L+S D+L+ATPGRL+DH++ F+L + L++DE DR+L E +
Sbjct: 299 --------------LRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYF 344
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + +++L C +R ++ SA
Sbjct: 345 EEQMKEIIRL----------------------------CSHQRQ----------TLLFSA 366
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA--LLQSLGE 371
T++++ LA + L +P+ + P + + I ++ VA LL +
Sbjct: 367 TMSEEVKDLASVSLRNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAVACALLTRTFQ 426
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++
Sbjct: 427 DHVMLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 483
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D++GV V+N P +K Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 484 DVAARGLDIDGVKTVINLTMPGTVKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIVK 543
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
KA P+ + IP +I R
Sbjct: 544 KA---QAPVKARVIPQDVISKFR 563
>gi|358060304|dbj|GAA94058.1| hypothetical protein E5Q_00705 [Mixia osmundae IAM 14324]
Length = 447
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 188/432 (43%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++I L RDL + TGSGKT ++ALPI+Q L N A V+ PTR+LA Q+
Sbjct: 38 IQAQSIPFALQGRDLVALAQTGSGKTAAFALPILQALWNEPSPFF-ACVLAPTRELAYQI 96
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ + VG
Sbjct: 97 S---------------------------------------EQFQALGSTIGVRCAVIVGG 117
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L KRP I+VATPGRL DH+ T+GF+L+ +
Sbjct: 118 MDMMTQSIALSKRPH---------------------IIVATPGRLQDHLENTKGFSLKAI 156
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DRLL + + T+L++ + +TFL
Sbjct: 157 KYLVMDEADRLLDMDFGPVIDTILKIIPRER-------NTFL------------------ 191
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L +P+ + T+Y + L K
Sbjct: 192 -------------FSATMTTKVAKLQRASLSNPVKVEV-STKYSTVDTLVQEYCFFPFKH 237
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV L L + IVF +V RL +L G + + G QS R L
Sbjct: 238 KETYLVYLCNELAGKSIIVFVRTVHDAQRLSLILRTLGFPAVPLH---GQLTQSNRLGAL 294
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G Q+LV++D +RG+D+ V+ VVNYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 295 NKFKSGGRQILVATDVASRGLDIPMVDYVVNYDIPTHSKDYIHRVGRTARAGRSGKSITL 354
Query: 478 LHKDEVKRFKKL 489
+ + +V+ +++
Sbjct: 355 VTQYDVELLQRI 366
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 103/431 (23%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
E I L +D+ + TGSGKT ++ LPI+Q L ++ R L AL++ PTR+LA Q++
Sbjct: 24 EAIPVALTGKDIIGLAETGSGKTAAFVLPILQALLDKPQR-LFALILTPTRELAFQIS-- 80
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+ A+ ++G+ + +G +
Sbjct: 81 -------------------------------------EQIEALGSSIGVQCAVIIGGIDM 103
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
+ L K+P I++ TPGRL DH+ T+GF+L L YL
Sbjct: 104 MTQSIMLAKKP---------------------HIIIGTPGRLADHLANTKGFSLRPLKYL 142
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR+L ++A + +L + LP RR
Sbjct: 143 VMDEADRILNMDFEAEVDKIL---------------SVLPKE-------RRT-------- 172
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 360
+ SAT+T+ KL + + P+ + T+Y E+L+ + +K K
Sbjct: 173 --------YLFSATMTKKVKKLQRASVQDPVKIEVS-TKYTTVEKLQQTYIFVPAKYKDC 223
Query: 361 YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAF 420
YLV++L L +VF ++ +T R+ +L + G I + G QS R L F
Sbjct: 224 YLVSILNELAGNSFMVFCATCINTQRIGLMLRNLGFNAIPL---HGQMSQSKRLGALHKF 280
Query: 421 REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
+ + +LV++D +RG+D+ V+ V+N+D P++ K YIHR GRTARAG+ GR + +
Sbjct: 281 KSKESSILVATDVASRGLDIPHVDIVINFDAPSHSKDYIHRVGRTARAGRSGRSIIFVTQ 340
Query: 481 DEVKRFKKLLQ 491
+V+ F+++ Q
Sbjct: 341 YDVELFQRIEQ 351
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 194/438 (44%), Gaps = 106/438 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E + L RD+ + TGSGKT ++ALPI+Q L R L A V+ PTR+LA Q+
Sbjct: 40 IQREALPHALEGRDIIGVASTGSGKTAAFALPILQKLWEEP-RGLFACVLAPTRELAYQI 98
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ A+G+ + VG
Sbjct: 99 SQQ---------------------------------------FEALGSAMGVRCAVLVGG 119
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ D+ L K+P I+VATPGRL H+ T+GF+L L
Sbjct: 120 MDLIDQAVALAKKPH---------------------IIVATPGRLQQHLTETKGFSLRGL 158
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL + + +L++ + +T+L
Sbjct: 159 KFLVLDEADRLLDLDFGPVIDQILKIIPKER-------TTYL------------------ 193
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L +P+ + ++Y+ L Y L
Sbjct: 194 -------------FSATMTTKVAKLQRASLSNPIRVEVS-SKYQTVSTLLQYYLFIPLSQ 239
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K ++L+ L SL I+FT +V RL +L G + + G QS R L
Sbjct: 240 KDVHLIYLANSLASNSIIIFTRTVHDAQRLSIMLRILGFPAVPLH---GQLSQSARLGAL 296
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +VLV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 297 AKFKSGGRKVLVATDVASRGLDIPSVDIVINFDIPNHSKDYIHRVGRTARAGRSGKSITL 356
Query: 478 LHKDEV---KRFKKLLQK 492
+ + +V +R +++++K
Sbjct: 357 VTQYDVELIQRIEEVIEK 374
>gi|255079330|ref|XP_002503245.1| predicted protein [Micromonas sp. RCC299]
gi|226518511|gb|ACO64503.1| predicted protein [Micromonas sp. RCC299]
Length = 605
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 207/470 (44%), Gaps = 114/470 (24%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCL 102
+G +S P+Q AV + L RD+C + TGSGKT ++ LP ++ + +R V
Sbjct: 168 LGYASPTPIQAAV----VPLALTGRDICGRAVTGSGKTAAFMLPCLERMLHRGPKPVAAT 223
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
LV++PTR+LA+QV H + E QF S+
Sbjct: 224 HVLVLVPTRELAVQV------------------HQMTERLAQFTSV-------------- 251
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
L VG S + + L RP +++VATPGRL
Sbjct: 252 -------RAALVVGGLSANVQATSLRSRP---------------------EVVVATPGRL 283
Query: 223 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 282
+DH+ T LE L LV+DE DRLL +L + ++
Sbjct: 284 IDHVRNTHSVGLEDLATLVLDEADRLLE---MGFLEEIREI------------------- 321
Query: 283 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---GETR 339
+R C P R M+ SATLT +LA+ + +P L+ G T
Sbjct: 322 ------VRHC---------PKRRQT-MLFSATLTSGVEELAEFSMKNPARLSADQIGTTP 365
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
L E + + + +K +L+A++ ++CI+F+ + + HRL ++ G +
Sbjct: 366 GTLTEEVLRLR-PGAAAMKEAHLLAIVARTFTKRCIIFSRTKQQAHRLKIIMGIHG---L 421
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
K E G Q+ R L+ FR G+ +V++D RG+D+ GV+ VV+YD P + +Y+
Sbjct: 422 KACELHGDLTQTQRLAALEEFRTGEATHMVATDVAARGLDIAGVDAVVSYDAPRTLASYL 481
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIE 509
HR GRTARAG+ G T + + + K K + ++ S+P+ ++E
Sbjct: 482 HRVGRTARAGRKGTALTFMEESDRKLIKAVSKRGSK--LVARSLPTHVVE 529
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 191/438 (43%), Gaps = 104/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
FP + +++I L RD+ + TGSGKT ++ALPI+Q L ++ + L LV+ PTR
Sbjct: 79 FPT--PIQEKSIPVALQNRDIIGLAETGSGKTAAFALPILQALLDKP-QPLFGLVLAPTR 135
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ + F A+ ++ L
Sbjct: 136 ELAHQIGQS---------------------------------------FEALGSSISLRC 156
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 157 AVIVGGLDMVPQAVALGKKPH---------------------IIVATPGRLVDHLEKTKG 195
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 196 FSLRTLKYLVMDEADRLLDMDFGPAIDKLLK---------------FIPRE-------RR 233
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SATL+ L + L P+ ++ +Y+ L L
Sbjct: 234 T----------------YLFSATLSSKVESLQRASLRDPVRVSVSSNKYQTVSTLLQNLL 277
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
+ K YL+ L+ + I+FT +V T R+ LL G I + G QS
Sbjct: 278 VIPQMRKDTYLIYLVNEFTGKSTIIFTRTVWETQRIAILLRTLGFGAIPLH---GQLSQS 334
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+
Sbjct: 335 ARLGALNKFRSGTRDILVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRTARAGKS 394
Query: 472 GRCFTLLHKDEVKRFKKL 489
G +L+ + +++ F+++
Sbjct: 395 GIAISLVTQYDIEVFQRI 412
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 212/481 (44%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A QN+ + P+Q I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 80 LVPELIQACQNLNFTKPTPIQA----RAIPPALAGSDVIGLAQTGSGKTAAFAIPILNKL 135
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A V+ PTR+LA
Sbjct: 136 WEDQ-QPYYACVLAPTRELA---------------------------------------Q 155
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 156 QIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPH---------------------I 194
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L++L +LV+DE DRLL + L +L++ +
Sbjct: 195 IIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIPTKGR----- 249
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T +KL + L +P+
Sbjct: 250 -TTYL-------------------------------FSATMTSKIDKLQRASLTNPVKCA 277
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK +L+ LL + I+FT + + RL L N
Sbjct: 278 V-SNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTVIIFTRTKANAERLSGLCNL- 335
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R+ L F+ GK +LV++D RG+D+ V+ V+NYD P
Sbjct: 336 --LEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVD 393
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +L
Sbjct: 394 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTL 449
Query: 512 R 512
R
Sbjct: 450 R 450
>gi|326932134|ref|XP_003212175.1| PREDICTED: hypothetical protein LOC100549747 [Meleagris gallopavo]
Length = 1561
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 213/483 (44%), Gaps = 117/483 (24%)
Query: 22 SLFEDCPL--DHLPCLD-----PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
S FED D L D P LK A+ +G P+Q A I GL +D+C
Sbjct: 971 SFFEDASQYDDSLSFQDMNLSRPLLK-AITALGFKQPTPIQKAC----IPVGLLGKDICA 1025
Query: 75 NSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+ TG+GKT ++ LP+++ L R R LV++PTR+L +QV
Sbjct: 1026 CAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQV--------------- 1070
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 192
HS+ + QF S V + +A VG GL V A
Sbjct: 1071 ---HSVTKQLAQFSS-----------VTSCLA--VG---GLDVKTQEAA----------- 1100
Query: 193 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 252
L+S DIL+ATPGRL+DH++ F L + L++DE DR+L E
Sbjct: 1101 ---------------LRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEY 1145
Query: 253 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 312
++ + + IR C R M+ S
Sbjct: 1146 FEEQMKEI----------------------------IRLCSKHRQT----------MLFS 1167
Query: 313 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLG 370
AT+T++ LA + L +P + P + + I ++ + + ALL
Sbjct: 1168 ATMTEEVKDLASVSLKNPTRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLTRTF 1227
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 430
+ ++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV+
Sbjct: 1228 PDHVMLFTQTKKQAHRMHILLGLMG---LRVGELHGNLSQAQRLEALRRFKDEQIDILVA 1284
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+D RG+D+EGV V+N+ P K Y+HR GRTARAG+ GR +L+ ++E K K+++
Sbjct: 1285 TDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIV 1344
Query: 491 QKA 493
+ A
Sbjct: 1345 KSA 1347
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 193/446 (43%), Gaps = 106/446 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 82 LVPELIQACHNLNFSKPTPIQ----SKSIPPALEGHDIIGLAQTGSGKTAAFAIPILNKL 137
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 138 WEDQ-QPYYACILAPTRELA---------------------------------------Q 157
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ EL+++P I
Sbjct: 158 QIKETFDSLGSLMGVRSVCIVGGMNMMDQSRELMRKPH---------------------I 196
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++ + D
Sbjct: 197 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT------QD 250
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + L +P+
Sbjct: 251 RTTYL-------------------------------FSATMTSKIEKLQRASLTNPVKCA 279
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ E L ++ LK YL+ LL + IVFT + + RL L N
Sbjct: 280 VS-NKYQTVETLVQTLMVVPGGLKNTYLIYLLNEFIGKSIIVFTRTKANAERLSALSNL- 337
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R+ L F+ GK Q+LV+ D RG+D+ V+ V+NYD P
Sbjct: 338 --LEFSSTALHGDLNQNQRTGALDLFKAGKRQILVAIDVAARGLDIPSVDIVINYDIPVD 395
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHK 480
K+YIHR GRTARAG+ G+ +L+ +
Sbjct: 396 SKSYIHRVGRTARAGRSGKSISLVSQ 421
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 214/494 (43%), Gaps = 118/494 (23%)
Query: 15 MRSPVDVSLFEDCP------LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
M SP D S P L +DP L+ AL+ +G S +Q E++ L
Sbjct: 1 MPSPEDASTSSATPEAQKHTFKSLGLIDPLLE-ALEQVGYKSPTEIQ----SESLPHALE 55
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q++
Sbjct: 56 GRDIIGVAETGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAYQISQQ-------- 106
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
F A+ A+G + VG + + L
Sbjct: 107 -------------------------------FEALGAAMGARCAVIVGGMDLPTQAIALA 135
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
KRP ++VATPGRL+ H+ T+GF+L L +LV+DE DRL
Sbjct: 136 KRPH---------------------VVVATPGRLLQHLEETKGFSLRTLKFLVLDEADRL 174
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L + + +L+L + +T+L
Sbjct: 175 LDMDFGPAIDKILKLIPKER-------TTYL----------------------------- 198
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 368
SAT+T KL + L +P+ + +Y+ L + L+ K K + L+ L S
Sbjct: 199 --FSATMTSKVAKLQRASLVNPVRVEV-SGKYQTVSTLLQHYLLVPLKDKVVMLIYLANS 255
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
L + I+FT +V L +L G + + G QS R L F+ G ++L
Sbjct: 256 LAQNSIIIFTRTVRDARLLSIILRTLGFPAVPLH---GQLSQSQRLGALGKFKSGGRKIL 312
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV---KR 485
V++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL+ + +V +R
Sbjct: 313 VATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRAGKAITLVTQYDVELLQR 372
Query: 486 FKKLLQKADNDSCP 499
+K++ K D+ P
Sbjct: 373 IEKVIGK-KMDAWP 385
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 189/443 (42%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QS 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L++ PTR+LA Q++ + F
Sbjct: 121 FFGLILAPTRELAFQISKS---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ + + + VG + + L K+P I+VATPGR
Sbjct: 142 SLGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 181 LLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKV---------------LPR 225
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 226 E-------RRT----------------FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 323 H---GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 380 VGRTARAGKSGVAISFVTQYDVE 402
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 195/444 (43%), Gaps = 108/444 (24%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
MGIS +QV+ E + RD ++ TGSGKT ++ALPI+Q LS AL
Sbjct: 21 MGISKPTEIQVSCIPEILSG----RDCIGSAKTGSGKTAAFALPIIQKLSEDPYGIF-AL 75
Query: 106 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 165
++ PTR+LA+Q+ D F A+
Sbjct: 76 ILTPTRELAIQI---------------------------------------ADQFKALGK 96
Query: 166 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 225
++GL+ + +G + + EL +P +++ATPGRL H
Sbjct: 97 SIGLNDAVIIGGLDMVKQGMELSNQPH---------------------VVIATPGRLASH 135
Query: 226 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 285
I + F+L + +LV+DE DRLL ++++ L +
Sbjct: 136 ITSGTKFSLNKIKFLVLDEADRLLEKSFENDLEVIF------------------------ 171
Query: 286 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 345
D + ++ SAT+T N L ++ H+P F ++ +
Sbjct: 172 --------------DNIAKKRQTLLFSATITDAINHLKEV-AHNP-FCYEVKSDFATVTE 215
Query: 346 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 405
L+ L+ S++K YLV LLQ+ E+ I+FT + S + +L ++ K
Sbjct: 216 LDQRYLLIPSQVKDCYLVHLLQNFSEKSVIIFTQTCRSCQVISFMLR---KVEFKCAGLH 272
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
+ Q R +L FR G +++LV++D +RG+D+ V V+NY+ PA K Y+HR GRT
Sbjct: 273 SVMSQRERLSSLGRFRSGHVKILVATDVASRGLDIPLVQLVINYNVPASPKDYVHRVGRT 332
Query: 466 ARAGQLGRCFTLLHKDEVKRFKKL 489
ARAG+ G TLL + ++ R K +
Sbjct: 333 ARAGRGGMSLTLLTQFDIDRLKAI 356
>gi|302652935|ref|XP_003018306.1| DEAD/DEAH box helicase, putative [Trichophyton verrucosum HKI 0517]
gi|291181934|gb|EFE37661.1| DEAD/DEAH box helicase, putative [Trichophyton verrucosum HKI 0517]
Length = 812
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 171/346 (49%), Gaps = 47/346 (13%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LRAL+++PTR+L QV A C+ C GL ++ ++ + + V +
Sbjct: 296 LRALIIVPTRELVKQVRDA-CELCSSG-SGLRIGTAVGSTALKDEQAQIMEQISVYRPES 353
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ + S+ D I+E + K G C E VD+L+ TPGR
Sbjct: 354 TRSQNGTIMTADEWASFSLVDYIAEAEEYSKTLPGHCI-------ESSPCVDVLICTPGR 406
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DHI +T+GFTL+ L +LV+DE DRLL E++Q W+ TVL + + P+
Sbjct: 407 LVDHIRSTKGFTLDSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PA 456
Query: 282 AFGSLKTIRRCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG 336
A GSL+ + K YP +L K++LSAT+T+D KL L LH+P L + G
Sbjct: 457 ATGSLEQL--------IKALSYPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDG 508
Query: 337 -------------ETRYKLPERL-ESYKLICESKLKPLYLVALLQS 368
++ LP L ES + + KPLYL+ LLQS
Sbjct: 509 AEKDEAEAGEAEPDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 374 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|354480665|ref|XP_003502525.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Cricetulus
griseus]
Length = 788
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 223/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 205 SEYDKSLSFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICAC 254
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 255 AATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQV---------------- 298
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF S+ AVG GL V A
Sbjct: 299 --HSVTKQLAQFCSV-------------TTCLAVG---GLDVKSQEAA------------ 328
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 329 --------------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 374
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + + IR C R M+ SA
Sbjct: 375 EEQMKEI----------------------------IRMCSHHRQ----------TMLFSA 396
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 397 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFT 456
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL L +++ E G Q+ R + L+ F++ +I +LV++
Sbjct: 457 DHVMLFTQTKKQAHRMHILLGL---LGLQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 513
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV V+N+ P +K Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 514 DVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 573
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + IP +I R
Sbjct: 574 AA---KAPVKARIIPQDVILKFR 593
>gi|145357256|ref|XP_001422836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583080|gb|ABP01195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 710
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 215/493 (43%), Gaps = 115/493 (23%)
Query: 22 SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
+ F+ D L P L A + +G P+Q AV I + RD+C + TGSG
Sbjct: 143 TTFDAKAFDELHLSRP-LTRACEALGYKKPTPIQAAV----IPIAMTGRDVCGRAVTGSG 197
Query: 82 KTLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSI 138
KT ++ LP ++ + +R R A LV++PTR+LA+QV H +
Sbjct: 198 KTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQV------------------HQM 239
Query: 139 AEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 198
E QF ++ + L VG S + + L RP
Sbjct: 240 TESLAQFTTIRAV---------------------LVVGGLSANVQAAALRTRP------- 271
Query: 199 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 258
+I+VATPGR++DH+ T F LE L L++DE DRLL + +
Sbjct: 272 --------------EIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIK 317
Query: 259 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 318
+ +R+C P R ++ SATLT
Sbjct: 318 EI----------------------------VRQC---------PKKRQT-LLFSATLTAG 339
Query: 319 PNKLAQLDLHHPLFLTTGETRYKLPERL--ESYKLI-CESKLKPLYLVALLQSLGEEKCI 375
LA L + +P L+ +T P+RL E KL +S K +L+A++ ++ I
Sbjct: 340 VEALASLSMKNPARLS-ADTLGTTPKRLVEEVLKLKPNQSAQKEAFLMAIVSRSYDKSTI 398
Query: 376 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 435
+F+ + + HRL ++ G IK E G Q+ R L FR G + L+++D
Sbjct: 399 IFSQTKQEAHRLKIIM---GLSDIKAGELHGDMTQTQRLAALDEFRTGTVTHLIATDVAA 455
Query: 436 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
RG+D+ V+ V+++D P + +Y+HR GRTARAG+ G T + + + K K + ++ N
Sbjct: 456 RGLDIPSVDAVISFDAPKTLASYLHRVGRTARAGKKGTALTFMEESDRKLVKTIAKRGAN 515
Query: 496 DSCPIHSIPSSLI 508
I +P +++
Sbjct: 516 LKARI--VPGNIV 526
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 193/432 (44%), Gaps = 99/432 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +I P L RD+ + TGSGKT ++++P++ L + R + A+++ PTR+LA Q+
Sbjct: 80 IQASSIPPALEGRDVIGLAETGSGKTGAFSIPVLNYLLEKPQRSVFAVILAPTRELAFQI 139
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ +V AA+ +G S VG
Sbjct: 140 H---------------------------------------EVVAALGSGMGASSVCVVGG 160
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+A + L + P ++VATPGRL+DH+ T+GF L +
Sbjct: 161 VDMASQAIALARNPH---------------------VVVATPGRLLDHLQNTKGFHLRQI 199
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++ +P G +T
Sbjct: 200 KYLVLDEADRMLSMDFEREINEILEV---------------IPDHEGGRRT--------- 235
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
M+ SAT+T KL + L P+ + T+++ P++L L +K
Sbjct: 236 -----------MLFSATMTSKVEKLQRASLVDPVRVEV-STKFQTPKKLLQSYLFIPAKY 283
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YL L+ + +VF ++ + RL +L + G I + G Q R L
Sbjct: 284 KDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAICLH---GQMSQPKRLGAL 340
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +++ +D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ +
Sbjct: 341 TKFKAGGRDIMICTDVASRGLDIPSVDVVINFDLPGHGKDYIHRVGRTARAGRSGKAIAM 400
Query: 478 LHKDEVKRFKKL 489
+ + +V+ +++L
Sbjct: 401 VTQYDVEVYQRL 412
>gi|261189897|ref|XP_002621359.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
gi|239591595|gb|EEQ74176.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
Length = 834
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 216/467 (46%), Gaps = 109/467 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q Q+TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 325 GLTSVGFTTPTPIQ----QKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 380
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 381 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 416
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 417 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 440
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 441 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 485
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T + +KL ++ L+ P+ L +
Sbjct: 486 PKSRQT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKK 522
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ +++ I+F + + HR+ + FG +
Sbjct: 523 QTVGTLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRII---FGLM 579
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 580 GLKAAELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEI 639
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 504
Y+HR GRTARAG+ GR TL + + K K ++ I S P
Sbjct: 640 YLHRVGRTARAGRSGRACTLAAEPDRKVVKAAVKTGRAQGAKIVSRP 686
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 191/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q+L ++ +
Sbjct: 70 ACDTLGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQSLLDKP-QP 124
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ + F
Sbjct: 125 LFGLVLAPTRELAYQISQS---------------------------------------FE 145
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 146 ALGSIIRVKCAVIVGGMDMVPQAIALGKKPH---------------------IIVATPGR 184
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 185 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 229
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ +Y+
Sbjct: 230 E-------RRT----------------YLFSATISSKVESLQRASLKDPLRVSISSNKYQ 266
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K YL+ LL + I+FT +V T R+ LL G I +
Sbjct: 267 TVSTLIQNYIFIPLVHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 326
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 327 H---GQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHR 383
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 384 VGRTARAGKSGHAISFVTQYDVE 406
>gi|125587400|gb|EAZ28064.1| hypothetical protein OsJ_12029 [Oryza sativa Japonica Group]
Length = 472
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 195/477 (40%), Gaps = 108/477 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-S 95
P L A MG +Q E I L RDL TGSGKT ++ LPI+Q L
Sbjct: 50 PELVAACDAMGWKEPTRIQA----EAIPHALEGRDLIGLGQTGSGKTGAFGLPIIQALLK 105
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
+ L A V+ PTR+LA Q+
Sbjct: 106 QDKPQALFACVLSPTRELAFQIGQQ----------------------------------- 130
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
F A+ A+GLS + VG + L KRP I+
Sbjct: 131 ----FEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPH---------------------IV 165
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
V TPGRL+DH+ T+GF+L L YLV+DE D+LL +Q L +L + +
Sbjct: 166 VGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERR------ 219
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
TFL SAT+T +KL + L +P+ +
Sbjct: 220 -TFL-------------------------------FSATMTNKVSKLQRACLRNPVKVEV 247
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
++Y + L + K +LV +L L ++F + EST L L +
Sbjct: 248 A-SKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRN-- 304
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
LR K SG Q R L F+ +L+ +D +RG+D++GV+ V+NYD P
Sbjct: 305 -LRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNS 363
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
K Y+HR GRTARAG G +L+++ E F K+++K P + ++ I LR
Sbjct: 364 KDYVHRVGRTARAGNTGYAVSLVNQYEAMWF-KMIEKLLGYEIPDRKVDNAEIMILR 419
>gi|124249330|ref|NP_694705.2| probable ATP-dependent RNA helicase DDX27 [Mus musculus]
gi|341940504|sp|Q921N6.3|DDX27_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|74140985|dbj|BAE22077.1| unnamed protein product [Mus musculus]
gi|74210620|dbj|BAE23664.1| unnamed protein product [Mus musculus]
gi|148674548|gb|EDL06495.1| mCG14602, isoform CRA_c [Mus musculus]
Length = 760
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 225/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 178 SEYDKSLSFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICAC 227
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 228 AATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQV---------------- 271
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF S+ + LAVG + +
Sbjct: 272 --HSVTKQLAQFCSI---------------------TTCLAVGGLDVKSQ---------- 298
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
EA L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 299 EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 347
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + + IR C R M+ SA
Sbjct: 348 EEQMKEI----------------------------IRMCSHHRQ----------TMLFSA 369
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 370 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFT 429
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL L +++ E G Q+ R + L+ F++ +I +LV++
Sbjct: 430 DHVMLFTQTKKQAHRMHILLGL---LGLQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 486
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV V+N+ P +K Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 487 DVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 546
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + +P +I R
Sbjct: 547 AA---KAPVKARILPQDVILKFR 566
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 214/479 (44%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q +I P L +D+ + TGSGKT ++A+PI+ +L +
Sbjct: 83 PELLEACKNLNYSKPTPIQ----SRSIPPALKGKDIIGLAQTGSGKTAAFAIPILNSLWH 138
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A ++ PTR+LA Q+
Sbjct: 139 DQ-QPYYACILSPTRELA---------------------------------------QQI 158
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 159 KETFDSLGSLMGVRSVCIVGGMNMMDQARDLMRKPH---------------------III 197
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGRLMDH+ TRGF+L +L YLV+DE DRLL + L +L++ + +
Sbjct: 198 GTPGRLMDHLENTRGFSLRNLKYLVMDEADRLLDMEFGPVLDRILKIIPTQGR------T 251
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
T+L SAT+T +KL + L +P+
Sbjct: 252 TYL-------------------------------FSATMTSKIDKLQRASLTNPVKCAV- 279
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
T+Y+ + L ++ +K YLV LL + I+FT + + R+ L N
Sbjct: 280 STKYQTVDTLVQTLMVVPGGVKDTYLVYLLNEFIGKSMIIFTRTKANAERISGLANL--- 336
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L+ G Q+ R+ L F+ G+ +LV++D RG+D+ V+ V+NYD P K
Sbjct: 337 LQFSATALHGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDVVINYDIPVDSK 396
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P ++ ++ +LR
Sbjct: 397 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKENVDKDIVLALR 451
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 184/417 (44%), Gaps = 105/417 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 100 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 156
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 157 LAFQIS---------------------------------------EQFEALGSSIGVQCA 177
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 178 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 216
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 217 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 256
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 257 ------------------FSATMTKKVQKLQRAALKNPVKCAV-SSKYQTVEKLQQYYLF 297
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 298 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 354
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG
Sbjct: 355 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAG 411
>gi|119494337|ref|XP_001264064.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
gi|119412226|gb|EAW22167.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
Length = 863
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 185/427 (43%), Gaps = 122/427 (28%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
EE +K S LP W+ +PV S + L +D L L++ G F VQ V
Sbjct: 225 EETEKPSYSSLPAWLANPVRESASKRARFSEL-GIDSNLLRVLEDHGYKEAFAVQSTVIP 283
Query: 61 ETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 119
+ GP DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q
Sbjct: 284 LLLQGPRRHPGDLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELVKQARE 343
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
A C+ C A GL +G AVG +
Sbjct: 344 A-CELC--------------------------------------ATGSGLRIGSAVGNVA 364
Query: 180 IADEISELIKRPKLEAGICYDPE-----------------------------------DV 204
I DE +R + CY PE
Sbjct: 365 IKDE-----QRTLMRVDQCYGPELSKQRQTVDLTGEDWTNFNLMNYLAETSDLSESLPGY 419
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL- 263
+Q + +DIL+ TPGRL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V+
Sbjct: 420 VQRAEPNIDILICTPGRLVDHLRYTKGFTLEHLEWLVIDEADRLLNESFQEWVDVVMNSL 479
Query: 264 -TRSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
R D P FGS K + + G+ ++ PR K++LSAT+T+D +K
Sbjct: 480 DARKD------------PKTFGSSGKFMAQLGLPIQSRE---PR--KVILSATMTRDISK 522
Query: 322 LAQLDLHHPLFL-------------------TTGETRYKLPERLESYKL-ICESKLKPLY 361
L L L +P + TT + ++ LP L+ Y + + + KPLY
Sbjct: 523 LNSLRLANPKLVIIGSAEPTATEEAEHDGVPTTSDEQFTLPSTLKEYSVSVGDGSQKPLY 582
Query: 362 LVALLQS 368
L+ LLQS
Sbjct: 583 LLQLLQS 589
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 15/130 (11%)
Query: 374 CIVFTSSVESTHRLC--------TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 425
++FT S ES RL +L NH G + IK + S KTL A+R GKI
Sbjct: 692 VLIFTKSSESASRLSRLISLLDPSLANHIGTI---IKS----NKSSASRKTLTAYRRGKI 744
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
++V++D +RG+D+E + +VVNYD P + TY+HR GRTARAG+ G +TL+ E
Sbjct: 745 SIIVATDRASRGLDLESLTHVVNYDVPPSVTTYVHRVGRTARAGKEGSAWTLVAHREGHW 804
Query: 486 FKKLLQKADN 495
F + K +
Sbjct: 805 FVNEISKGSD 814
>gi|388578792|gb|EIM19128.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 438
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 194/438 (44%), Gaps = 104/438 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ Q++I L RD+ + TGSGKT ++ALP++Q L + V+ PTR+LA Q+
Sbjct: 30 IQQQSIPYSLQSRDIIGLAQTGSGKTAAFALPVIQLLYDNPAPYF-CCVLAPTRELAYQI 88
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +GL VG
Sbjct: 89 S---------------------------------------EQFEALGSNIGLRTATIVGG 109
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I+VATPGRL DH+ T+GF+L ++
Sbjct: 110 MDMMTQSIALSKKPH---------------------IIVATPGRLHDHLENTKGFSLRNI 148
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL + + +L++ LP ER
Sbjct: 149 KFLVMDEADRLLDMDFGPIIDKLLKI---------------LPK-------------ER- 179
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
M+ SAT+T KL + L +P+ + + +Y+ L + L K+
Sbjct: 180 ---------TTMLFSATMTTKVAKLQRASLSNPVKVEVSD-KYQTVSTLLQHYLFFPFKM 229
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV L + I+FT +V R+ +L + G I + G QS R L
Sbjct: 230 KDSYLVYLANEVAGHSMIIFTRTVVDAQRISIILRNLGFPAIPLH---GQLSQSSRLGAL 286
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +LV++D +RG+D+ V+ VVNYD P+ K YIHR GRTARAG+ G+ TL
Sbjct: 287 NKFKAGGRNILVATDVASRGLDIPSVDYVVNYDTPSNSKDYIHRVGRTARAGRSGKAITL 346
Query: 478 LHKDEVKRFKKLLQKADN 495
+ + +V+ ++ ++KA N
Sbjct: 347 VTQYDVELLQR-IEKAIN 363
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 185/437 (42%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A N+G + P+Q ++I L RD+ + TGSGKT ++ALP++Q L + +
Sbjct: 66 ACANLGYTKPTPIQA----QSIPHALANRDIIGLAETGSGKTAAFALPVIQALLEKP-QA 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA Q+ F
Sbjct: 121 FFGLVLAPTRELAAQIGQQ---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L + VG + + L K+P ++VATPGR
Sbjct: 142 ALGSLISLRTAVIVGGLDMVAQAIALGKKPH---------------------VIVATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 181 LVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILK---------------FIPR 225
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L P+ ++ +Y+
Sbjct: 226 E-------RRT----------------FLFSATMSSKIESLQRASLRDPVRVSISSNKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L Y L +LK YLV L +K +VFT +V T RL LL G I +
Sbjct: 263 TVSTLLQYYLFIPHQLKDTYLVYLANEFAGKKLVVFTRTVSETQRLAILLRTLGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G Q+ R L FR G+ +LV++D RG+D+ V+ V+N+D KT++HR
Sbjct: 323 H---GQLNQTARLGALNKFRAGERSILVATDVAARGLDIPLVDVVINHDLAQDSKTHVHR 379
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G +L+
Sbjct: 380 IGRTARAGKSGIALSLV 396
>gi|125559478|gb|EAZ05014.1| hypothetical protein OsI_27195 [Oryza sativa Indica Group]
Length = 414
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 188/452 (41%), Gaps = 103/452 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC-LRALVVLPTRDLALQ 116
+ E I L RD+ TGSGKT ++ALPI+Q L R A V+ PTR+LA+Q
Sbjct: 9 IQAEAIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPRFLACVLAPTRELAIQ 68
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
+ F A+ A+ L + +G
Sbjct: 69 IAKQ---------------------------------------FEALGSAISLQCSVLIG 89
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ L KRP ++V TPGRL+DH+ T+GF+
Sbjct: 90 GIPRTSQTISLAKRPH---------------------VVVGTPGRLLDHLTNTKGFSFNK 128
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L YLV+DE D LL+ +Q + +L + + TFL
Sbjct: 129 LKYLVLDEADDLLKVDFQKAVDDILNVIPKERR-------TFL----------------- 164
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
SAT+T+ KL + L +P+ + ++Y L + L + +K
Sbjct: 165 --------------FSATMTEKVKKLRRACLKNPVKVEVA-SKYSLVDTLRQDLYVVPAK 209
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K YL+ +L + +VF + EST L +L + LR K SG Q R
Sbjct: 210 YKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRN---LRFKAISISGQMSQDKRLGA 266
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L FR +LV +D +RG+D++GV+ V+NYD P K YIHR GRTARAGQ G +
Sbjct: 267 LNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVS 326
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 508
L+++ E + FK Q + P + + I
Sbjct: 327 LVNQFEGEFFKLTEQFLGGEEIPARKVDADEI 358
>gi|145353647|ref|XP_001421118.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581354|gb|ABO99411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 755
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 215/493 (43%), Gaps = 115/493 (23%)
Query: 22 SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
+ F+ D L P L A + +G P+Q AV I + RD+C + TGSG
Sbjct: 143 TTFDAKAFDELHLSRP-LTRACEALGYKKPTPIQAAV----IPIAMTGRDVCGRAVTGSG 197
Query: 82 KTLSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSI 138
KT ++ LP ++ + +R R A LV++PTR+LA+QV H +
Sbjct: 198 KTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQV------------------HQM 239
Query: 139 AEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 198
E QF ++ + L VG S + + L RP
Sbjct: 240 TESLAQFTTIRAV---------------------LVVGGLSANVQAAALRTRP------- 271
Query: 199 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 258
+I+VATPGR++DH+ T F LE L L++DE DRLL + +
Sbjct: 272 --------------EIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIK 317
Query: 259 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 318
+ +R+C P R ++ SATLT
Sbjct: 318 EI----------------------------VRQC---------PKKRQT-LLFSATLTAG 339
Query: 319 PNKLAQLDLHHPLFLTTGETRYKLPERL--ESYKLI-CESKLKPLYLVALLQSLGEEKCI 375
LA L + +P L+ +T P+RL E KL +S K +L+A++ ++ I
Sbjct: 340 VEALASLSMKNPARLS-ADTLGTTPKRLVEEVLKLKPNQSAQKEAFLMAIVSRSYDKSTI 398
Query: 376 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 435
+F+ + + HRL ++ G IK E G Q+ R L FR G + L+++D
Sbjct: 399 IFSQTKQEAHRLKIIM---GLSDIKAGELHGDMTQTQRLAALDEFRTGTVTHLIATDVAA 455
Query: 436 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
RG+D+ V+ V+++D P + +Y+HR GRTARAG+ G T + + + K K + ++ N
Sbjct: 456 RGLDIPSVDAVISFDAPKTLASYLHRVGRTARAGKKGTALTFMEESDRKLVKTIAKRGAN 515
Query: 496 DSCPIHSIPSSLI 508
I +P +++
Sbjct: 516 LKARI--VPGNIV 526
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 188/438 (42%), Gaps = 102/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +E I L RD+ + TGSGKT ++ALPI+Q L + + LV+ PTR
Sbjct: 78 FKTPTAIQREAIPLALSGRDIIGLAETGSGKTAAFALPILQALLHDP-QPFFGLVLAPTR 136
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ F A+ + +
Sbjct: 137 ELAYQISQQ---------------------------------------FEALGSLIRVRC 157
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 158 AVIVGGMDMVPQAIALAKKPH---------------------IVVATPGRLLDHLENTKG 196
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L YL++DE DRLL + L +LQ+ LP RR
Sbjct: 197 FSLRSLKYLIMDEADRLLDLDFGPILDKILQV---------------LPRE-------RR 234
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT+ + L + L +P+ ++ + Y+ L +
Sbjct: 235 TAL----------------FSATMNTKLDNLTRAALRNPVRVSISTSSYQTVANLLQQYI 278
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K +YL+ LL + CI+FT +V T RL LL L G QS
Sbjct: 279 FIPHKHKDVYLIHLLTEFSGQTCILFTRTVTETQRLAFLLR---ALNFSAIPLHGQLPQS 335
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR G +LV++D RG+D+ V+ V+N+D P KTY+HR GRTARAG+
Sbjct: 336 ARLGALNKFRSGSRSILVATDVAARGLDIPSVDLVINFDLPPDSKTYVHRVGRTARAGKS 395
Query: 472 GRCFTLLHKDEVKRFKKL 489
G +++ + +V+ F+++
Sbjct: 396 GVAVSVVTQYDVEVFQRI 413
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 195/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R A+++ PTR+LA Q+
Sbjct: 83 IQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-AVILTPTRELAYQI 141
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 142 S---------------------------------------EQFEALGASIGIKCCVIVGG 162
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L ++P I++ATPGRL+DH+ T+GF L+ +
Sbjct: 163 MDMVSQALHLARKPH---------------------IIIATPGRLVDHLENTKGFNLKAV 201
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ + TFL
Sbjct: 202 KYLVMDEADRILNLDFEVELEKILKVIPRERR-------TFL------------------ 236
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + ++Y+ E+L Y + +K
Sbjct: 237 -------------FSATMTKKVKKLERASLKDPVKVEVS-SKYQTVEKLLQYYIFIPAKY 282
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T R +L G + + G Q+ R L
Sbjct: 283 KDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMSQNKRLAAL 339
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ Q+L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 340 NKFKGKNRQILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRAGKAVTF 399
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 400 VTQYDVELYQRI 411
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 213/483 (44%), Gaps = 130/483 (26%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
+L +G ++ P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R
Sbjct: 222 SLTTLGFNTPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGK 277
Query: 98 ---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A RCL V++PTR+LA+Q C + +A H+ C
Sbjct: 278 KAAATRCL---VLVPTRELAVQ---------CFEVGTKLAAHTDIRSC------------ 313
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
L VG S+ + + L RP D+
Sbjct: 314 ------------------LVVGGLSLKAQEASLRTRP---------------------DV 334
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH+ + FTLE L LV+DE DR+L E+ FSD
Sbjct: 335 VIATPGRLIDHLRNSPTFTLEALDILVLDEADRML-------------------EDGFSD 375
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T + I+ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 376 ELTEI---------IKSC---------PTSRQT-MLFSATMTDTVDELVRMSLNKPVRL- 415
Query: 335 TGETRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+ P+R + L+ E + L AL + K I+F S + H+
Sbjct: 416 -----FVDPKRTTARGLVQEFVRVRAGKEAERSALLAALCKRTFRTKSIIFFRSKKLAHQ 470
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
+ + + G +K E G Q R K L+ FR+G + L+++D +RG+D++G+ V
Sbjct: 471 MRIVFSLLG---MKSDELHGDLSQEQRLKALQQFRDGTVDYLMATDLASRGLDIKGIETV 527
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH-SIPS 505
+NYD P + Y+HR GRTARAG+ GR TL+ + + K K ++ A + H +P+
Sbjct: 528 INYDMPGQLALYLHRVGRTARAGKKGRSVTLVGEADRKMLKAAIKHAAGEDQVRHRQVPA 587
Query: 506 SLI 508
I
Sbjct: 588 EAI 590
>gi|357617988|gb|EHJ71096.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 776
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 199/446 (44%), Gaps = 112/446 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTR 111
P+Q A TI L +D+C + TG+GKT +Y +P+++ L + R R LV++PTR
Sbjct: 192 PIQAA----TIPIALLGKDICACAATGTGKTAAYMVPVLERLLYKPTERRTRVLVLVPTR 247
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+L QV H++ QF S+ ++
Sbjct: 248 ELGAQV------------------HTVTRQLAQFTSV---------------------TI 268
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
GL+VG + + S L + P D+++ATPGRL+DH+ T
Sbjct: 269 GLSVGGLDVKYQESVLRRHP---------------------DVVIATPGRLIDHVRNTPS 307
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F L + L++DE DR+L E + + + IR+
Sbjct: 308 FDLNSIEVLILDEADRMLDEYFAEQMKEI----------------------------IRQ 339
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTG-ETRYKLPERLES 348
C P+ M+ SAT++ LA + L P LFL + + + L R E
Sbjct: 340 CS----------PKRQTMLFSATMSDQVRDLAAVSLKKPVKLFLDSNKDVAFNL--RQEF 387
Query: 349 YKLICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
++ E + + L AL+ +++ ++F + + HRL L G IK+ E G
Sbjct: 388 VRIRKERECDREAILAALVCRTFKDRAVIFVQTKKQAHRLHVALGLLG---IKVAELHGA 444
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
Q R +LK FRE ++ VLV++D RG+D+ GV V+N+ PA I+ YIHR GRTAR
Sbjct: 445 LNQPQRLDSLKRFREEQVDVLVATDVAARGLDIPGVKTVLNFTLPATIEHYIHRVGRTAR 504
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKA 493
AG+ G +L + E K ++++A
Sbjct: 505 AGRAGVSVSLAGEGERNLVKTIVRRA 530
>gi|409080848|gb|EKM81208.1| hypothetical protein AGABI1DRAFT_119719 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 398
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 183/429 (42%), Gaps = 119/429 (27%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E I P L RD+ +PTGSGKT+++ALPI+ L + ALV+ PTR+
Sbjct: 30 PTQIQA--ECIPPALSGRDIIGIAPTGSGKTIAFALPILHRLWDNPQSNF-ALVLSPTRE 86
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL-SV 171
LA Q+++ F A+ A+G+ SV
Sbjct: 87 LAYQISAQ---------------------------------------FEALGAAMGVRSV 107
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ G+ + L K+P I+VATPGRL DH+N+T+G
Sbjct: 108 VIVGGEEDRVQQAVRLAKKPH---------------------IIVATPGRLHDHLNSTKG 146
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +LV+DE DRL +P + ST+L
Sbjct: 147 FSLRQLKHLVLDEADRL-------AIP--------------RERSTYL------------ 173
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
SAT+T + KL + L P+ + +YK L Y +
Sbjct: 174 -------------------FSATMTANVTKLQRASLTDPVRVDVSSFKYKTVPSLLQYYV 214
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
+C K + LV L+ S+ + IVF +V RL +L L + G QS
Sbjct: 215 LCPLVNKEVMLVYLINSMAQNTIIVFVRTVADAKRLSIVLR---TLEFQAVPLHGELSQS 271
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R F+ GK +LV++D +RG+DV V+ V+NYD P K Y+HR GRTARAG+
Sbjct: 272 QRLGAFNRFKSGKSNILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRVGRTARAGRA 331
Query: 472 GRCFTLLHK 480
G+ ++ +
Sbjct: 332 GKSILMVSQ 340
>gi|417412705|gb|JAA52724.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 788
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 218/500 (43%), Gaps = 116/500 (23%)
Query: 20 DVSLF-EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S + E+ + P LK A+ M P+Q A I GL +D+C + T
Sbjct: 202 DASQYDENLSFQDMNLSRPLLK-AITAMNFKQPTPIQKAC----IPVGLLGKDICACAAT 256
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALPI++ L R R LV++PTR+L +QV H
Sbjct: 257 GTGKTAAFALPILERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 298
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ + QF S+ + LAVG + + + L P
Sbjct: 299 SVVKQLAQFCSI---------------------TTCLAVGGLDVKSQEAALRAVP----- 332
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 333 ----------------DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 376
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 377 MKEI----------------------------IRMCSHHR----------QTMLFSATMT 398
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 399 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 458
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL G +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 459 MLFTQTKKQAHRMHILLGLMG---LQVGELHGNLSQAQRLEALRRFKDEQIDILVATDVA 515
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+ GV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A
Sbjct: 516 ARGLDIAGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA- 574
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 575 --KAPVKARILPQDVILKFR 592
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 197/434 (45%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++A+PI+Q L R AL++ PTR+LA Q+
Sbjct: 45 IQKEAIPVALQGKDIIGLAETGSGKTGAFAIPILQALLENPQRYF-ALILTPTRELAFQI 103
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ A+ ++G+ + VG
Sbjct: 104 SEQ---------------------------------------IEALGSSIGVKCAVIVGG 124
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF+L +L
Sbjct: 125 MDMMAQSLMLAKKPH---------------------IIIATPGRLVDHLENTKGFSLRNL 163
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
LV+DE DR+L ++ + +L++ E R TFL
Sbjct: 164 KVLVMDEADRILNMDFEEEVDKILKVI--PRERR-----TFL------------------ 198
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + T+++ E+L+ Y + K
Sbjct: 199 -------------FSATMTKKVQKLHRASLVDPVRVEVS-TKFQTVEQLQQYYIFIPVKY 244
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L + +VF ++ T R+ LL + G I + G Q+ R +L
Sbjct: 245 KDVYLVHILNEMAGNSFMVFMATCNGTVRVALLLRNLGLDAIPL---HGQMTQNKRLASL 301
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 302 NKFKSKSRSILISTDVSSRGLDIPHVDVVINFDMPTHSKDYIHRVGRTARAGRSGKAITL 361
Query: 478 LHKDEVKRFKKLLQ 491
+ + +++ ++++ Q
Sbjct: 362 VTQYDIELYQRIEQ 375
>gi|348564128|ref|XP_003467857.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Cavia
porcellus]
Length = 803
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 224/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 219 SQYDESLSFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICAC 268
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 269 AATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV---------------- 312
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF S+ AVG GL V A
Sbjct: 313 --HSVTKQLAQFCSI-------------TTCLAVG---GLDVKSQEAA------------ 342
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 343 --------------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 388
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + + IR C R M+ SA
Sbjct: 389 EEQMKEI----------------------------IRMCSHHRQ----------TMLFSA 410
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T++ LA + L +P+ + P + + I ++ + + ALL
Sbjct: 411 TMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRSFT 470
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL L +++ E G Q+ R + L+ F++ +I +LV++
Sbjct: 471 DHVMLFTQTKKQAHRMHILLGL---LGLQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 527
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 528 DVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 587
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + +P +I R
Sbjct: 588 AA---KAPVKARILPQDVILKFR 607
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 188/443 (42%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMENP-QS 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L++ PTR+LA Q++ + F
Sbjct: 121 FFGLILAPTRELAFQISKS---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ + + + VG + + L K+P I+VATPGR
Sbjct: 142 SLGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 181 LLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKV---------------LPR 225
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 226 E-------RRT----------------FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 323 H---GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 380 VGRTARAGKSGVAISFVTQYDVE 402
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 201/459 (43%), Gaps = 109/459 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P+L A + +G + A+ E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 54 PQLCEACETLG----YKAPTAIQAESIPLALQNRDLIGLAETGSGKTAAFALPILQALMD 109
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ + LV+ PTR+LA Q++ A
Sbjct: 110 KP-QPFFGLVLAPTRELAYQISEA------------------------------------ 132
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
F A+ + + + VG + + + KRP I+V
Sbjct: 133 ---FEALGSTISVRSVVLVGGMDMVPQAIAIGKRPH---------------------IIV 168
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH+ T+GF+L L YLV+DE DRLL + + +L++
Sbjct: 169 ATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKV------------- 215
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
LP RR + SAT++ L + L +PL ++
Sbjct: 216 --LPRE-------RRT----------------FLFSATMSSKVESLQRASLSNPLRVSVS 250
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ L Y + K K ++L+ LL + I+FT ++ T+RL L G
Sbjct: 251 SNKYQTVSTLLQYYMFIPHKHKDVHLIWLLNEHIGQTTIIFTRTIHETNRLALLTRFLGF 310
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + G QS R ++ FR +L+++D RG+D+ V+ V+NYD A K
Sbjct: 311 SAIALH---GQLSQSSRLASISKFRSKTRSILIATDVAARGLDIPSVDLVLNYDLAADSK 367
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQK 492
T++HR GRTARAG+ G+ +L+ + +V+ R +K L K
Sbjct: 368 THVHRIGRTARAGKSGKAISLVTQYDVEVWLRIEKALDK 406
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 97 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRFF-ALVLTPTRELAFQI 155
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
F A+ ++G+ + VG
Sbjct: 156 GEQ---------------------------------------FEALGSSIGIKCCVVVGG 176
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 177 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKSI 215
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 216 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 248
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ Y L K
Sbjct: 249 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQYYLFIPVKY 296
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 297 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 353
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 354 NKFKAKDRSILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRSGKAITL 413
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 414 VSQYDIELYQRI 425
>gi|209447030|ref|NP_001129273.1| probable ATP-dependent RNA helicase DDX27 [Rattus norvegicus]
gi|169642292|gb|AAI60885.1| Ddx27 protein [Rattus norvegicus]
Length = 761
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 225/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 178 SEYDKSLTFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICAC 227
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 228 AATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQV---------------- 271
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF S+ + LAVG + +
Sbjct: 272 --HSVTKQLAQFCSI---------------------TTCLAVGGLDVKSQ---------- 298
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
EA L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 299 EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 347
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + + IR C R M+ SA
Sbjct: 348 EEQMKEI----------------------------IRMCSHHRQ----------TMLFSA 369
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 370 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFT 429
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL L +++ E G Q+ R + L+ F++ +I +LV++
Sbjct: 430 DHVMLFTQTKKQAHRMHILLGL---LGLQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 486
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV V+N+ P +K Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 487 DVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 546
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + +P +I R
Sbjct: 547 AA---KAPVKARILPQDVILKFR 566
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 107/434 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ F A+ +GL + V
Sbjct: 127 QIGQQ---------------------------------------FEALGSGIGLIAAVIV 147
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 148 GGVDMAAQAMALARRPH---------------------IIVATPGRLVDHLENTKGFNLK 186
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 187 ALKFLIMDEADRILNMDFEVELDKILKVIPRERR-------TYL---------------- 223
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ +KL + L P ++ +RYK + L+ + + +
Sbjct: 224 ---------------FSATMTKKVSKLERASLRDPARVSV-SSRYKTVDNLKQHYIFVPN 267
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YLV LL IVF ++ +T ++ +L G + + G Q R
Sbjct: 268 KYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPL---HGQMSQEKRLG 324
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
+L F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G
Sbjct: 325 SLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAI 384
Query: 476 TLLHKDEVKRFKKL 489
T++ + +V+ ++K+
Sbjct: 385 TVVTQYDVEAYQKI 398
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 193/448 (43%), Gaps = 106/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 74 ACDTLGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALLDKP-QP 128
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ F
Sbjct: 129 LFGLVLAPTRELAYQISQQ---------------------------------------FE 149
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 150 ALGSVIRVKCAVIVGGMDMVPQSIALGKKPH---------------------IIVATPGR 188
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 189 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 233
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ +Y+
Sbjct: 234 E-------RRT----------------YLFSATISSKVESLQRASLKDPLRVSISSNKYQ 270
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K YL+ LL + I+FT +V T R+ LL G I +
Sbjct: 271 TVSTLIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 330
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 331 H---GQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHR 387
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G +++ + +++ F ++
Sbjct: 388 VGRTARAGKSGHAISVVTQYDLEIFMRI 415
>gi|409083507|gb|EKM83864.1| hypothetical protein AGABI1DRAFT_117335, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 701
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 207/464 (44%), Gaps = 123/464 (26%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
A+ N+G + P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 208 AVTNLGFNKPTPIQAS----TIPVALLGKDVVGNAVTGSGKTAAFMIPMIERLLFREKGK 263
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
+R LV++PTR+LA+Q C + ++ H+ +C
Sbjct: 264 KAAAIRCLVLVPTRELAVQ---------CYEVGTKLSIHTDIRLC--------------- 299
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
L VG S+ + ++L RP DI++A
Sbjct: 300 ---------------LVVGGLSLKSQEADLRSRP---------------------DIVIA 323
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DHI + F+L+ L LV+DE DR+L E FSD T
Sbjct: 324 TPGRLIDHIRNSASFSLDALDILVIDEADRILSEG-------------------FSDELT 364
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
+ I+ C P R M+ SAT+T ++L ++ L P+ L
Sbjct: 365 EI---------IKSC---------PRSRQT-MLFSATMTDSVDELVRVSLEKPVRL---- 401
Query: 338 TRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
+ P+R + LI E + LV L + + + IVF S + H++
Sbjct: 402 --FVDPKRTTARGLIQEFVRVRAGKEAERSAMLVTLCRRTFKRRVIVFLRSKKLAHQMRI 459
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
+ + G +K +E G Q R + L+ FR+ + L+++D +RG+D++GV V+NY
Sbjct: 460 VFSLLG---MKCEELHGDLSQEQRLRALQLFRDDAVDFLMATDLASRGLDIKGVETVINY 516
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
D P + Y+HR GRTARAG+ GR TL+ + + K + ++ A
Sbjct: 517 DMPTQLAQYLHRVGRTARAGRGGRAVTLVGEADRKMLRAAIKHA 560
>gi|58266632|ref|XP_570472.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110998|ref|XP_775963.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818015|sp|P0CQ93.1|DRS1_CRYNB RecName: Full=ATP-dependent RNA helicase DRS1
gi|338818016|sp|P0CQ92.1|DRS1_CRYNJ RecName: Full=ATP-dependent RNA helicase DRS1
gi|50258629|gb|EAL21316.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226705|gb|AAW43165.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 808
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 203/475 (42%), Gaps = 107/475 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
AL ++ ++ P+Q I L RD+ ++ TGSGKT ++ +PI++ L +
Sbjct: 236 ALTSLQFTAPTPIQA----RAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGK 291
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
R LV+ PTR+LA+Q C+ K
Sbjct: 292 GGAACRVLVLCPTRELAVQ-----CEAVGK------------------------------ 316
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
A+A GL V A+ L G+ + + L++ DIL+A
Sbjct: 317 ----ALAEKGGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIA 353
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DH+ T FTL L LV+DE DR+L + L +
Sbjct: 354 TPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI----------------- 396
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
I+ C P R M+ SAT+T ++L +L L P+ +
Sbjct: 397 -----------IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDP 435
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
R + + I + L+AL + EKCI+F S H++ + FG
Sbjct: 436 KRNTARGLTQEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFG-- 493
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R + L F+ G + L+++D +RG+D++GV V+NYD P +
Sbjct: 494 -LKAAELHGNLTQEQRLQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQ 552
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
Y HR GRTARAG+ GR +L+ + + K K +++A+ D IPS + +++
Sbjct: 553 YTHRVGRTARAGRKGRSVSLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMK 607
>gi|357500171|ref|XP_003620374.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495389|gb|AES76592.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 431
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 196/450 (43%), Gaps = 115/450 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A + MG + +Q+ E I P L +DL + TGSGKT ++ALPI+ L N
Sbjct: 16 ACEKMGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAPRPN 71
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
C V+ PTR+LA+Q++
Sbjct: 72 HFFAC----VMSPTRELAIQIS-------------------------------------- 89
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ F A+ +G+ + VG + + ++ K P I+V
Sbjct: 90 -EQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP---------------------HIIV 127
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGR++DH+ T+GF+L L YLV+DE DRLL E ++ L +L + +
Sbjct: 128 GTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERR------- 180
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
TFL SAT+T+ KL ++ L +P+ + T
Sbjct: 181 TFL-------------------------------FSATMTKKVEKLQRVCLRNPVKIET- 208
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
++Y + L+ +K K YLV +L + +VFT + +ST L +L + G
Sbjct: 209 SSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGL 268
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I I +G Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K
Sbjct: 269 KAIPI---NGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSK 325
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
YIHR GRTARAG+ G +L+++ E++ +
Sbjct: 326 DYIHRVGRTARAGRSGVAISLVNQYELEWY 355
>gi|426201453|gb|EKV51376.1| hypothetical protein AGABI2DRAFT_114110 [Agaricus bisporus var.
bisporus H97]
Length = 754
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 207/464 (44%), Gaps = 123/464 (26%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
A+ N+G + P+Q + TI L +D+ N+ TGSGKT ++ +P+++ L +
Sbjct: 208 AVTNLGFNKPTPIQAS----TIPVALLGKDVVGNAVTGSGKTAAFMIPMIERLLFREKGK 263
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
+R LV++PTR+LA+Q C + ++ H+ +C
Sbjct: 264 KAAAIRCLVLVPTRELAVQ---------CYEVGTKLSIHTDIRLC--------------- 299
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
L VG S+ + ++L RP DI++A
Sbjct: 300 ---------------LVVGGLSLKSQEADLRSRP---------------------DIVIA 323
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DHI + F+L+ L LV+DE DR+L E FSD T
Sbjct: 324 TPGRLIDHIRNSASFSLDALDILVIDEADRILSEG-------------------FSDELT 364
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
+ I+ C P R M+ SAT+T ++L ++ L P+ L
Sbjct: 365 EI---------IKSC---------PRSRQT-MLFSATMTDSVDELVRVSLEKPVRL---- 401
Query: 338 TRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
+ P+R + LI E + LV L + + + IVF S + H++
Sbjct: 402 --FVDPKRTTARGLIQEFVRVRAGKEAERSAMLVTLCRRTFKRRVIVFLRSKKLAHQMRI 459
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
+ + G +K +E G Q R + L+ FR+ + L+++D +RG+D++GV V+NY
Sbjct: 460 VFSLLG---MKCEELHGDLSQEQRLRALQLFRDDAVDFLMATDLASRGLDIKGVETVINY 516
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
D P + Y+HR GRTARAG+ GR TL+ + + K + ++ A
Sbjct: 517 DMPTQLAQYLHRVGRTARAGRGGRAVTLVGEADRKMLRAAIKHA 560
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 197/453 (43%), Gaps = 112/453 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +QV E+I L +DL + TGSGKT ++A+PI+Q L +
Sbjct: 96 ACENLGYKNPTSIQV----ESIPVALEGKDLIGLAETGSGKTAAFAIPILQALWDNPT-G 150
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L A ++ PTR+LA Q++ + F
Sbjct: 151 LFACILAPTRELAFQIS---------------------------------------EQFE 171
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ +G+ + VG + + L K+P ILVATPGR
Sbjct: 172 ALGGGIGVRSAVIVGGMDMMTQSVALGKKPH---------------------ILVATPGR 210
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 211 LLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKV------------------ 252
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
+ RR + SAT+T KL + L P+ ++ G ++Y
Sbjct: 253 ----IPQTRRT----------------YLFSATMTSKVEKLQRASLSSPVRISVG-SKYS 291
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K YLV L+ + I+F +V+ T RL LL H G + +
Sbjct: 292 TVSTLIQKFLFIPFKHKDTYLVYLMNEFAGQTTIIFCRTVQETSRLAILLRHLGFNAVPL 351
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN-----VVNYDKPAYIK 456
+G QS R L F+ G +LV++D RG+D+ + V+N+D K
Sbjct: 352 ---NGQMSQSARLGALNKFKSGSRNILVATDVAARGLDMHVSPDALLYCVLNHDLAQDSK 408
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
TYIHR GRTARAG+ GR +L+ + EV+ F ++
Sbjct: 409 TYIHRVGRTARAGRSGRSISLVTQYEVELFLRI 441
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R ALV+ PTR+LA Q+
Sbjct: 81 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF-ALVLTPTRELAFQI 139
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 140 G---------------------------------------EQFEALGSGIGIKCCVVVGG 160
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 161 MDMVAQGLQLAKKP---------------------HIIIATPGRLVDHLENMKGFNLKAI 199
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 200 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 232
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 233 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 280
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 281 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 337
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ GR T+
Sbjct: 338 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGRAITM 397
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 398 VSQYDIELYQRI 409
>gi|321473370|gb|EFX84337.1| hypothetical protein DAPPUDRAFT_209410 [Daphnia pulex]
Length = 592
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 219/497 (44%), Gaps = 116/497 (23%)
Query: 23 LFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
L+E H L L A+ +M P+Q A TI L RD+C + TG+GK
Sbjct: 11 LYEPAESFHEMNLSRPLMKAIASMNFVHPTPIQSA----TIPVALLGRDVCGCAATGTGK 66
Query: 83 TLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
T ++ LP+++ L R R LV++PTR+L +QV + +++
Sbjct: 67 TAAFMLPVLERLMYRPKVSATTRVLVLVPTRELGVQV------------------YQVSK 108
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
QF ++ +GLS+G + ++ E +
Sbjct: 109 QLSQFTNI-----------------QIGLSIG------GLDLKVQEKV------------ 133
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
L+ D+++ATPGRL+DH+ T F+LE + L++DE DR+L E + + +
Sbjct: 134 -------LRGNPDVVIATPGRLIDHLRNTPSFSLEAIDVLILDEADRMLDEFFIEQVKEI 186
Query: 261 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 320
I +CG +R M+ SAT++ +
Sbjct: 187 ----------------------------IMQCGRKRQ----------TMLFSATMSNEVR 208
Query: 321 KLAQLDLHHPLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 377
LA + L+ P+ + R + L + + E + + L AL+ C+VF
Sbjct: 209 DLAAVSLNKPIKVFVNNNRDVAFNLRQEFVRIRPNHEGDREAI-LCALVCRTFRNHCMVF 267
Query: 378 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 437
+ HRL L G I++ E G Q R + L+ F+E I +LVS+D RG
Sbjct: 268 VQTKMLCHRLHVQLGLLG---IRVGELHGNLSQPQRLEALRKFKEEDIDILVSTDVAARG 324
Query: 438 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDS 497
+D+ GV V+NY P I+ YIHR GRTARAG+ G +L + E K K+++++A+N
Sbjct: 325 LDIPGVQTVINYTMPPTIERYIHRVGRTARAGRSGVSVSLAGEGERKVVKEIVKRANN-- 382
Query: 498 CPIHS--IPSSLIESLR 512
P+ S IP+ ++E +
Sbjct: 383 -PVKSRLIPNEILEKYK 398
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 202/458 (44%), Gaps = 108/458 (23%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ + +QV E + L RD+ + TGSGKT ++ALPI+
Sbjct: 542 LGLIDPLLE-ALEQLNFKHPTDIQV----EALPHALQGRDIIGVASTGSGKTAAFALPIL 596
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
Q L + L A V+ PTR+LA Q++ QF+ L
Sbjct: 597 QKLWEEP-KGLFACVLAPTRELAYQISQ------------------------QFEGL--- 628
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
A+G+ VG + + L KRP
Sbjct: 629 ------------GSAMGVRCVTIVGGLDMMAQSVALAKRPH------------------- 657
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
I+VATPGRL+DH+ T+GF+L L +LV+DE DRLL + + +L++ +
Sbjct: 658 --IVVATPGRLIDHLENTKGFSLRGLKFLVLDEADRLLDMDFGPIIDKILKIIPKER--- 712
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
+T+L SAT+T KL + L +P+
Sbjct: 713 ----TTYL-------------------------------FSATMTTKVAKLQRASLSNPV 737
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
+ E +Y L Y L K ++L+ L +L + I+FT +V RL +L
Sbjct: 738 RVEVSE-KYSTVSTLLQYYLFIPLVQKDVHLIYLANTLAQNSIIIFTRTVHDAQRLSIIL 796
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
G + + G QS R L F+ G ++LV++D +RG+D+ V+ V+NYD
Sbjct: 797 RTLGFPAVPLH---GQLSQSARLGALGKFKSGGRKILVATDVASRGLDIPHVDVVINYDI 853
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
P + K YIHR GRTARAG+ G+ TL+ + +V+ +++
Sbjct: 854 PTHSKDYIHRVGRTARAGRSGKSVTLVTQYDVELIQRI 891
>gi|358378227|gb|EHK15909.1| hypothetical protein TRIVIDRAFT_174620, partial [Trichoderma virens
Gv29-8]
Length = 652
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 174/351 (49%), Gaps = 42/351 (11%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-D 71
PW+ +P+ VS+ P L L P+ L+ G + F VQ A + ++ D
Sbjct: 72 PWLSAPIRVSVDTQTPFTELGIL-PKAARVLEQKGYTEAFAVQTAALPLLLPTNKQQQGD 130
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 131
L +++ TGSGKTL+YALPIV+ LSN V LRALVVLPTR+L Q + C K G
Sbjct: 131 LLVSAATGSGKTLAYALPIVRDLSNSVVTRLRALVVLPTRELVKQAQEV-FELCAKAYEG 189
Query: 132 -----LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
+ +I + + L +S D A S G S+ D++ +
Sbjct: 190 EDRKRVRVGIAIGNQSLASEQDLLVSKETRYDPEAYKQLEQEASNG--ASSSNNEDDLDD 247
Query: 187 LIKRPKLE-AGICYDP-EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
L+ P A P + + + S VDIL+ TPGRL++H++ T GF+L ++ +LVVDE
Sbjct: 248 LLSGPNTRRANPRIGPWQGQVIDFYSKVDILICTPGRLVEHLDQTPGFSLSYIRWLVVDE 307
Query: 245 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 304
D+LL +++Q WL VL+ F S FG+ R F D PY
Sbjct: 308 ADKLLAQSFQGWLDVVLE--------------KFKTSEFGA----------RDFPDMPYS 343
Query: 305 RLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGE----TRYKLPERLESY 349
+ K++LSATLT+D + L QL L P + L +G+ T + LPE L Y
Sbjct: 344 GVRKILLSATLTRDLSLLNQLALRRPKLIVLESGKDVQVTEHSLPESLREY 394
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 411 SVRSKTLKAFR--EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 468
S+R KTL+AF ++++++SD + RG+D+ + +V+NYD P + +Y+HR GRTARA
Sbjct: 532 SIRRKTLRAFTTPSSPLRLIIASDLVARGIDIPKLPHVINYDLPPSVASYVHRVGRTARA 591
Query: 469 GQLGRCFTLLHKDEVKRF 486
G+ G +TL+ E F
Sbjct: 592 GRSGCAWTLVGDGESGWF 609
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 196/450 (43%), Gaps = 115/450 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A + MG + +Q+ E I P L +DL + TGSGKT ++ALPI+ L N
Sbjct: 87 ACEKMGWKNPLKIQI----EAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAPRPN 142
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
C V+ PTR+LA+Q++
Sbjct: 143 HFFAC----VMSPTRELAIQIS-------------------------------------- 160
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ F A+ +G+ + VG + + ++ K P I+V
Sbjct: 161 -EQFEALGSEIGVKCAVLVGGIDMVQQSVKIAKLP---------------------HIIV 198
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGR++DH+ T+GF+L L YLV+DE DRLL E ++ L +L + +
Sbjct: 199 GTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERR------- 251
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
TFL SAT+T+ KL ++ L +P+ + T
Sbjct: 252 TFL-------------------------------FSATMTKKVEKLQRVCLRNPVKIETS 280
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
++Y + L+ +K K YLV +L + +VFT + +ST L +L + G
Sbjct: 281 -SKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGL 339
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I I +G Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K
Sbjct: 340 KAIPI---NGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSK 396
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
YIHR GRTARAG+ G +L+++ E++ +
Sbjct: 397 DYIHRVGRTARAGRSGVAISLVNQYELEWY 426
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 204/455 (44%), Gaps = 103/455 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L ++ ++ ++ +Q A +I P L RD+ + TGSGKT S+A+PI+ L
Sbjct: 46 LHPSLLSSIASLQWTNPTQIQAA----SIPPALEGRDVIGLAETGSGKTGSFAIPILNYL 101
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + + A+++ PTR+LA Q++
Sbjct: 102 LEKPQKQVFAVILAPTRELAFQIH------------------------------------ 125
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+V A+ +G + VG +A + L + P +
Sbjct: 126 ---EVMVALGRGMGANSVCVVGGVDMASQAIALARNPH---------------------V 161
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGRL+DH+ T+GF L + YLV+DE DR+L ++ + +L++
Sbjct: 162 VVATPGRLLDHLQNTKGFHLRQIKYLVMDEADRMLSMDFEKEINEILEV----------- 210
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
I C E+G + M+ SAT+T KL + L P+ +
Sbjct: 211 --------------IPDC--EKGRR--------TMLFSATMTSKVEKLQRASLVDPVRVE 246
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
T+++ P++L L +K K YL L+ + +VF ++ + RL +L +
Sbjct: 247 V-STKFQTPKKLLQNYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNL 305
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I + G Q R L F+ G +L+ +D +RG+D+ V+ V+N+D P +
Sbjct: 306 GFPAICLH---GQMSQPKRLGALTKFKSGGRDILICTDVASRGLDIPSVDVVINFDLPGH 362
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
K YIHR GRTARAG+ G+ ++ + +V+ +++L
Sbjct: 363 GKDYIHRVGRTARAGRSGKAIAMVTQYDVEVYQRL 397
>gi|440632967|gb|ELR02886.1| hypothetical protein GMDG_01108 [Geomyces destructans 20631-21]
Length = 870
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 183/381 (48%), Gaps = 64/381 (16%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERDL 72
W+ SP+ V+ + L L + +L+ GI S F VQ AV + GP D+
Sbjct: 266 WLGSPISVAPTATAQFEDL-GLPSAVIESLKKSGIPSAFAVQAAVLSLLLPGPQKQPGDV 324
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+++ TGSGKTL+Y LP+V+ +S V LR L+V+PTR+L Q C N +G
Sbjct: 325 LVSAATGSGKTLAYVLPMVEDISQTMVTQLRGLIVMPTRELVTQAR--EVSDMCANAYGT 382
Query: 133 -----------IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
I + ++ + F+ P+ A + A SS+
Sbjct: 383 GSRRHINVGVAIGNQTLRQEQSSLMKQDFVYDPKEYR-------ARQERINAAWSGSSVG 435
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
DE++ L+ +E I P D + + VDI++ TPGRL++H+ +T GFTLEHL +LV
Sbjct: 436 DEVANLL----MEEDIST-PIDHIVQYSPKVDIMICTPGRLVEHLKSTPGFTLEHLKWLV 490
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 301
+DE D+LL +++Q WL TV+ + T PS S KD
Sbjct: 491 IDEADKLLDQSFQQWLETVMA--------SLTSRETAAPSQLRS-------------KD- 528
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLF--------LTTGETRY---KLPERL-ESY 349
R+ K+VLSAT+T+D L+QL L+ P F + GE + LP L ES
Sbjct: 529 ---RITKVVLSATMTRDIGLLSQLKLNKPKFVVLEGNEGMGAGEGQVDTLNLPHTLHESA 585
Query: 350 KLICESKLKPLYLVALLQSLG 370
I + LKPLYL+ +L+ G
Sbjct: 586 IKIDQEGLKPLYLLEVLKRNG 606
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
KP + L++ G ++FT S ES RL LL + + E + + R +TL
Sbjct: 688 KPAGNIKLVKPHG---VLIFTKSNESAVRLFRLLALL--VPSRASEIGAITSTTSRKRTL 742
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
++FR G + VL++SD + RG+D+ + +VVNYD P I +Y+HR GRTARAG+ G TL
Sbjct: 743 RSFRSGALSVLIASDLVARGLDLPNLAHVVNYDMPTSITSYVHRVGRTARAGKEGAATTL 802
Query: 478 LHKDEVKRF 486
E + F
Sbjct: 803 FSATEGRWF 811
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 187/437 (42%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q QE I L RD+ + TGSGKT ++ALPI+Q L ++ +
Sbjct: 79 ACERLGYKNPTPIQ----QEAIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKP-QP 133
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L ALV+ PTR+LA Q+ A F
Sbjct: 134 LFALVLAPTRELAAQIAQA---------------------------------------FE 154
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L L +G + + L K+P ++VATPGR
Sbjct: 155 ALGSLISLRCALILGGLDMVQQAIALGKKPH---------------------VVVATPGR 193
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L +LV+DE DRLL + L +L+ FLP
Sbjct: 194 LLDHLEKTKGFSLRNLKFLVMDEADRLLDMDFGPILEKILK---------------FLPR 238
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ ++Y+
Sbjct: 239 E-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSISSSKYQ 275
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K YL+ L + I+FT +V T R+ LL G I +
Sbjct: 276 TVSTLVQNYIFIPHMHKDTYLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL 335
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
+ GL QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 336 --HGGLS-QSARLGALNKFRAKSRDILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHR 392
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G + +
Sbjct: 393 VGRTARAGKSGHAISFV 409
>gi|363750628|ref|XP_003645531.1| hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889165|gb|AET38714.1| Hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
Length = 486
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 208/479 (43%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ + P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 75 PELIEACENLKFTKPTPIQ----SKAIPPALQGNDIIGLAQTGSGKTAAFAIPILNQLWH 130
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A ++ PTR+LA Q+
Sbjct: 131 DQ-QPYYACILAPTRELA---------------------------------------QQI 150
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ +G ++ D+ +L+++P I++
Sbjct: 151 KETFDSLGSLMGVRSTCIMGGMNMMDQARDLMRKPH---------------------III 189
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + A L +L
Sbjct: 190 ATPGRLMDHLENTKGFSLRKLRFLVIDEADRLLDMEFGAVLDRIL--------------- 234
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
K+ P + SAT+T +KL + L +P+ +
Sbjct: 235 ----------------------KNIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCSVS 272
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK YL+ LL + IVFT + + R+ L N
Sbjct: 273 -NKYQTVDTLIQTLMVVPGGLKNTYLIYLLNEFIGKSTIVFTRTKANAERISGLCNL--- 328
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R+ L F+ G+ +LV++D RG+D+ V+ V+NYD P K
Sbjct: 329 LEFSATALHGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSK 388
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R + +L K P I ++I SLR
Sbjct: 389 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGK----KLPKEDINKNMILSLR 443
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 207/479 (43%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
A ++ PTR+LA Q+
Sbjct: 146 DQ-EPYYACILAPTRELA---------------------------------------QQI 165
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 166 KETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------III 204
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 205 ATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII------------ 252
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
P + SAT+T +KL + L +P+
Sbjct: 253 -------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS 287
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 288 -NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL--- 343
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R +L F+ GK +LV++D RG+D+ V+ VVNYD P K
Sbjct: 344 LEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSK 403
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +LR
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 191/444 (43%), Gaps = 106/444 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ P+Q I P L RD+ + TGSGKT ++A+PI+ L
Sbjct: 81 PELIEACKNLNFDKPTPIQA----RAIPPALEGRDIIGLAQTGSGKTAAFAIPILNRLWE 136
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A V+ PTR+LA Q
Sbjct: 137 DK-QPYYACVLAPTRELA---------------------------------------QQT 156
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ EL+++P I++
Sbjct: 157 KETFDSLGALMGVRSTCIVGGMNMMDQARELMRKPH---------------------III 195
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++ + D +
Sbjct: 196 ATPGRLMDHLENTKGFSLRKLRFLVMDEADRLLDMEFGPVLDKILKVIPT------QDRT 249
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
T+L SAT+T +KL + L P+
Sbjct: 250 TYL-------------------------------FSATMTSKIDKLQRASLTEPVKCAVS 278
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ S LK YL+ LL + I+FT + + RL L N
Sbjct: 279 -NKYQTVDTLVQTLMVVPSGLKNTYLIYLLNENIGKTVIIFTRTKANAERLSALCNL--- 334
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R+ L F+ G+ +LV++D RG+D+ V+ V+NYD P K
Sbjct: 335 LEFNATALHGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSK 394
Query: 457 TYIHRAGRTARAGQLGRCFTLLHK 480
+YIHR GRTARAG+ G+ +L+ +
Sbjct: 395 SYIHRVGRTARAGRSGKSISLVSQ 418
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 200/448 (44%), Gaps = 107/448 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++I L RD+ + TGSGKT ++A+P++Q+L + L +V+ PTR+LA Q+
Sbjct: 90 IQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENP-QPLYCVVLAPTRELAYQI 148
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ A+GL + VG
Sbjct: 149 S---------------------------------------ETFEALGSAMGLRTAVVVGG 169
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
++ + L K+P ++VATPGRL+DH+ T+GF+L L
Sbjct: 170 MNMMTQAVALSKKPH---------------------VIVATPGRLVDHLENTKGFSLRTL 208
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL D E F PS LK I R
Sbjct: 209 KFLVMDEADRLL-----------------DME--------FGPSLDKILKVIPR------ 237
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ Y + SAT+T KL + L P+ + T+Y+ + L Y + C K
Sbjct: 238 -QRNTY------LFSATMTSKVEKLQRASLVDPVRVAVS-TKYQTADNLLQYMVFCPFKH 289
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +LV L+ I+F + T R+ LL + G I + G Q+ R L
Sbjct: 290 KDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAIPLH---GDLSQTARLGAL 346
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +L+++D +RG+D+ V+ V+NYD P+ K+YIHR GRTARAG+ G+ L
Sbjct: 347 NKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRTARAGRAGKSVAL 406
Query: 478 LHKDEVK---RFKKLLQKADNDSCPIHS 502
+ + +++ R + L K DS P+ S
Sbjct: 407 VSQYDLELYLRIEGALGKK-LDSYPLES 433
>gi|351703078|gb|EHB05997.1| Putative ATP-dependent RNA helicase DDX27 [Heterocephalus glaber]
Length = 765
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 222/500 (44%), Gaps = 116/500 (23%)
Query: 20 DVSLFEDC-PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
D S ++D + P LK A+ MG P+Q A I GL +D+C + T
Sbjct: 179 DASQYDDSLSFQDMNLSRPLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAAT 233
Query: 79 GSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
G+GKT ++ALP+++ L R R LV++PTR+L +QV H
Sbjct: 234 GTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV------------------H 275
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
S+ QF S+ + LAVG + + EA
Sbjct: 276 SVTRQLAQFCSI---------------------TTCLAVGGLDVKSQ----------EAA 304
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++
Sbjct: 305 -----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQ 353
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ + IR C R M+ SAT+T
Sbjct: 354 MKEI----------------------------IRMCSHHR----------QTMLFSATMT 375
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKC 374
+ LA + L +P+ + P + + I ++ + + ALL +
Sbjct: 376 DEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHV 435
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
++FT + + HR+ LL L +++ E G Q+ R + L+ F++ +I +LV++D
Sbjct: 436 MLFTQTKKQAHRMHILLGL---LGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVA 492
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D+EGV V+N+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A
Sbjct: 493 ARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA- 551
Query: 495 NDSCPIHS--IPSSLIESLR 512
P+ + +P +I R
Sbjct: 552 --KAPVKARILPQDVILRFR 569
>gi|239612877|gb|EEQ89864.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ER-3]
Length = 834
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 216/467 (46%), Gaps = 109/467 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 325 GLTSVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 380
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 381 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 416
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 417 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 440
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 441 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 485
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T + +KL ++ L+ P+ L +
Sbjct: 486 PKSRQT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKK 522
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ +++ I+F + + HR+ + FG +
Sbjct: 523 QTVGTLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRII---FGLM 579
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 580 GLKAAELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEI 639
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 504
Y+HR GRTARAG+ GR TL + + K K ++ I S P
Sbjct: 640 YLHRVGRTARAGRSGRACTLAAEPDRKVVKAAVKTGRAQGAKIVSRP 686
>gi|327352045|gb|EGE80902.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 834
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 216/467 (46%), Gaps = 109/467 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 325 GLTSVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 380
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 381 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 416
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 417 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 440
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 441 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 485
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T + +KL ++ L+ P+ L +
Sbjct: 486 PKSRQT-----------------------MLFSATMTNNVDKLIRVGLNRPVRLMVDAKK 522
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ +++ I+F + + HR+ + FG +
Sbjct: 523 QTVGTLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRII---FGLM 579
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 580 GLKAAELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEI 639
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 504
Y+HR GRTARAG+ GR TL + + K K ++ I S P
Sbjct: 640 YLHRVGRTARAGRSGRACTLAAEPDRKVVKAAVKTGRAQGAKIVSRP 686
>gi|440799062|gb|ELR20123.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 762
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 218/485 (44%), Gaps = 112/485 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A+ N+G PVQ + I L +D+C ++ TGSGKT S+ LPI++ L +R R
Sbjct: 207 AVANLGYDRPTPVQ----SQAIPIALQGKDVCASATTGSGKTASFVLPILERLIHRDKRI 262
Query: 102 L--RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+ R +++ PTR+LA+Q C HS+ E +F
Sbjct: 263 MATRVVILTPTRELAIQ---------C---------HSVIEKLAKF-------------- 290
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
++ L VG +++++ E A + P DI+VATP
Sbjct: 291 -------TDITACLVVG--GLSNKVQE--------AALRRHP-----------DIVVATP 322
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + FTLE + LV+DE DRLL + L +++ F
Sbjct: 323 GRIIDHLRNAQSFTLETVDILVLDEADRLLSLGFADELEQIIK---------------FC 367
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P P ++ SAT+T++ ++LA L L+ P+ +
Sbjct: 368 P-----------------------PNRQTLLFSATMTEEVDRLASLSLNRPVRVRLDPNM 404
Query: 340 YKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + I E++ + L+AL +++ ++F + + HRL + FG
Sbjct: 405 RVASGIQQEFIKIKEAREFDRDAMLLALCTRSFKKRVLIFFRAKKEAHRLKVI---FGLA 461
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q+ R + L+ FR+G L+++D RG+D+ G+ ++NY+ +++
Sbjct: 462 GLKAAELHGNLSQNQRLEALEKFRDGNFDYLLATDLAARGLDILGIETIINYNMARTVES 521
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
YIHR GRTAR G G+ T + + + K FK+++ K+ N IP +I+ R S
Sbjct: 522 YIHRVGRTARWGHSGKSVTFISEQDRKVFKEIM-KSTNQKVSNRVIPPKIIDQWREKIDS 580
Query: 518 --GDV 520
GD+
Sbjct: 581 MKGDI 585
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 192/433 (44%), Gaps = 103/433 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ Q +I L +DL + TGSGKT ++ALPI+Q L + L A ++ PTR+LA Q+
Sbjct: 128 IQQASIPLALAGKDLIGLAETGSGKTAAFALPILQALYHSPHSTLFACILAPTRELAFQI 187
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + AI ++G+ + VG
Sbjct: 188 S---------------------------------------EQTEAIGGSLGVKTCVIVGG 208
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L KRP I+VATPGRL+DH+ T+GF+L +
Sbjct: 209 MDMMPQAIALSKRPH---------------------IIVATPGRLLDHLENTKGFSLRSI 247
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DRLL + + +L++ LP
Sbjct: 248 KYLVMDEADRLLDLDFGPIIEKILKV---------------LP----------------- 275
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
P+ + SAT+T +L ++ L +P+ + ++Y+ + L Y ++ K
Sbjct: 276 ------PQRNTYLFSATMTDKVERLQRMSLTNPVRVAV-SSKYQTVKSLLQYFMLIPQKD 328
Query: 358 KPLYLVALL-QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K YLV L+ + + I+FT ++ T R+ LL G I + G Q+ R
Sbjct: 329 KDTYLVYLVAEKFAGKTMIIFTRTIMDTQRISVLLRLLGCSAIPLH---GQLSQTGRLGA 385
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ G +LV++D RG+D+ V+ V+NYD KTYIHR GRTARAG+ G C
Sbjct: 386 LNKFKAGARNILVATDVAARGLDIPTVDYVINYDIAGDSKTYIHRVGRTARAGRSGVCVN 445
Query: 477 LLHKDEVKRFKKL 489
L+ + +++ F ++
Sbjct: 446 LVTQYDIEEFTRI 458
>gi|300175700|emb|CBK21243.2| unnamed protein product [Blastocystis hominis]
Length = 485
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 205/479 (42%), Gaps = 113/479 (23%)
Query: 17 SPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINS 76
SP D F D + C A+ N+G +Q V + + +D+ +
Sbjct: 47 SPEDNKTFSDYGVCDTLCQ------AIDNLGWKHPSSIQRDVLKIALQEDQ-NKDIIAIA 99
Query: 77 PTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
TGSGKT ++A+PI+Q L + R + AL+V PTR+LA Q++
Sbjct: 100 ETGSGKTGAFAIPIIQRLIDNPQR-MYALIVTPTRELAFQIS------------------ 140
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
+ F A+ +VGL + VG + + L ++P
Sbjct: 141 ---------------------EQFEALGSSVGLKTAVIVGGIDMVQQALALARKPH---- 175
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
++V TPGRL+DH+ T+GF+L + YLV+DE DR L ++
Sbjct: 176 -----------------VVVGTPGRLVDHLENTKGFSLNTMKYLVLDEADRCLSMDFEEA 218
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
+ +L S F P R V + SAT+T
Sbjct: 219 IDKIL-------------------SCF------------------PKER-VTYLFSATMT 240
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 376
Q KL + L P+ + ++Y+ L L +K K YL ++ + I+
Sbjct: 241 QKVVKLQRASLQDPVKIQVS-SKYQTVSTLIQQYLFIPAKYKECYLAFIMNEFRGKSTIL 299
Query: 377 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 436
F S+ S+ L L + G + I +G Q R L F+EG +L+++D +R
Sbjct: 300 FVSTCSSSQLLTLFLRNLGFKAVCI---NGNLSQVKRLGALNKFKEGARNILIATDVASR 356
Query: 437 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV---KRFKKLLQK 492
G+D+ V+ VVNYD P K Y+HR GRTARAG+ GR T + + +V +R +KL++K
Sbjct: 357 GLDIPEVDLVVNYDIPGNGKDYVHRVGRTARAGKSGRAITFVTQYDVESYQRIEKLIEK 415
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 189/432 (43%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++ +P++Q L R L ALV+ PTR+LA Q+
Sbjct: 46 IQEEAIPVALQGNDVIGLAETGSGKTGAFCIPVLQALLENPQR-LFALVLTPTRELAFQI 104
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
++ F A+ A+G+ + VG
Sbjct: 105 ---------------------------------------EEQFKALGSAIGIKTCVVVGG 125
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P ++VATPGRL+DH+ T+GFTL +
Sbjct: 126 VDMMGQQIILAKKPH---------------------VVVATPGRLVDHLEKTKGFTLRSI 164
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DR+L +++ L T+L++ E R TFL
Sbjct: 165 KFLVLDEADRILNMDFESELDTILKVI--PRERR-----TFL------------------ 199
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L P+ +Y ++L Y L SK
Sbjct: 200 -------------FSATMTGKVKKLQRAALTKPVKCAVN-NKYHTVDKLFQYYLFLPSKD 245
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YL A++ L I+F + +T R +L + G I G Q+ R L
Sbjct: 246 KDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLG---ISAVPLHGQMSQAKRLGAL 302
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +LV++D +RG+D+ V+ V+N D PA K YIHR GRTARAG+ G+ T
Sbjct: 303 NKFKSATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRTARAGRFGKSVTF 362
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 363 VTQYDVELYQRI 374
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 208/481 (43%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 130 LVPELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL 185
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 186 WHDQ-EPYYACILAPTRELA---------------------------------------Q 205
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 206 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------I 244
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 245 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII---------- 294
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
P + SAT+T +KL + L +P+
Sbjct: 295 ---------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 327
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 328 VS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL- 385
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R +L F+ GK +LV++D RG+D+ V+ VVNYD P
Sbjct: 386 --LEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVD 443
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +L
Sbjct: 444 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTL 499
Query: 512 R 512
R
Sbjct: 500 R 500
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 206/479 (43%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
A ++ PTR+LA Q+
Sbjct: 146 DQ-EPYYACILAPTRELA---------------------------------------QQI 165
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 166 KETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------III 204
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 205 ATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII------------ 252
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
P + SAT+T +KL + L +P+
Sbjct: 253 -------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS 287
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 288 -NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL--- 343
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P K
Sbjct: 344 LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSK 403
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +LR
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|195123476|ref|XP_002006232.1| GI18677 [Drosophila mojavensis]
gi|193911300|gb|EDW10167.1| GI18677 [Drosophila mojavensis]
Length = 787
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP V+ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTVERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --EVGLAIGGLDVKAQETVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQ----------TMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ S IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIEKYR 540
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 207/481 (43%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 88 LVPELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL 143
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 144 WHDQ-EPYYACILAPTRELA---------------------------------------Q 163
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 164 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------I 202
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 203 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII---------- 252
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
P + SAT+T +KL + L +P+
Sbjct: 253 ---------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 285
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 286 VS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL- 343
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P
Sbjct: 344 --LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVD 401
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +L
Sbjct: 402 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTL 457
Query: 512 R 512
R
Sbjct: 458 R 458
>gi|295656812|ref|XP_002788992.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285824|gb|EEH41390.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 815
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 165/327 (50%), Gaps = 44/327 (13%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-----ETIGPGLF 68
W+ P D + L ++PRL L+ G FP+Q AV++ E PG
Sbjct: 210 WLTEPFDAPVSVQQNFSDL-GVNPRLVSILEKRGYIRAFPIQAAVFELLSKGENRHPG-- 266
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
DLCI++ TGSGKTL+YALP+V+ + A+ LR LV++PTR+L Q A C+ C
Sbjct: 267 --DLCISAATGSGKTLAYALPMVEGIEQSAIPKLRGLVIVPTRELVKQARDA-CELCATG 323
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
GL ++ ++ + L I Q+ FA+ LSV + A + E I
Sbjct: 324 T-GLRIGTAVGTTSLKEEQALLIKRDQLYSPFASQT----LSVQSMSSEDWAAFNVQEYI 378
Query: 189 KRPKLEAGICYD--PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 246
EA + + P V +DIL+ TPGRL+DHI T+GFTLEHL +LVVDE D
Sbjct: 379 ----AEANVSHTALPNHVTTS-SPCIDILICTPGRLVDHIRCTQGFTLEHLEWLVVDEAD 433
Query: 247 RLLREAYQAWLPTV---LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
RLL E++Q W V L++ R + ++ S F + G C + R
Sbjct: 434 RLLNESFQEWTEVVFPALEMERIVSNSK----SGFFLNQLG-------CRIHRR------ 476
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHP 330
+L K++LSAT+T+D KL L L +P
Sbjct: 477 -QLQKIILSATVTRDIPKLNSLRLRNP 502
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 375 IVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
+VFT S ES RL LL L +I + + + KTL A+R GKI +++++D
Sbjct: 640 LVFTKSSESASRLALLLALMHPPLAKRIGTLTKSNKSTTSRKTLSAYRNGKISIVIATDC 699
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
+RG+D+ + +VVNYD PA + +YIHR GRTARAG G +T + E + F + K
Sbjct: 700 ASRGLDLPSLTHVVNYDVPASLTSYIHRVGRTARAGNSGSAWTFVAHREGRWFSNEIMK- 758
Query: 494 DNDSCP 499
CP
Sbjct: 759 ----CP 760
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 206/479 (43%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
A ++ PTR+LA Q+
Sbjct: 146 DQ-EPYYACILAPTRELA---------------------------------------QQI 165
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 166 KETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------IVI 204
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 205 ATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII------------ 252
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
P + SAT+T +KL + L +P+
Sbjct: 253 -------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS 287
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 288 -NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL--- 343
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P K
Sbjct: 344 LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSK 403
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +LR
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 206/479 (43%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
A ++ PTR+LA Q+
Sbjct: 146 DQ-EPYYACILAPTRELA---------------------------------------QQI 165
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 166 KETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------III 204
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 205 ATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII------------ 252
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
P + SAT+T +KL + L +P+
Sbjct: 253 -------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS 287
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 288 -NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL--- 343
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P K
Sbjct: 344 LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSK 403
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +LR
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|357505249|ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
Length = 1155
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 197/448 (43%), Gaps = 116/448 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+++ + E I P L +DL + TGSGKT ++ALPI+ L N C V+
Sbjct: 749 PLEIQI--EAIPPALEGKDLIGLAKTGSGKTGAFALPILHALLEAPRPNHFFAC----VM 802
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
PTR+LA+Q++ + F A+ +
Sbjct: 803 SPTRELAIQIS---------------------------------------EQFEALGSEI 823
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
G+ + VG + + ++ K P I+V TPGR++DH+
Sbjct: 824 GVKCAVLVGGIDMVQQSVKIAKLPH---------------------IIVGTPGRVLDHLK 862
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T+GF+L L YLV+DE DRLL E ++ L +L G +
Sbjct: 863 NTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL----------------------GMIP 900
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLE 347
RR + SAT+T KL ++ L +P+ + T ++Y + L+
Sbjct: 901 RERRT----------------FLFSATMTNKVEKLQRVCLRNPVKIETS-SKYSTVDTLK 943
Query: 348 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+K K YLV +L + +VFT + +ST L +L + G I I +G
Sbjct: 944 QQYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPI---NGH 1000
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTAR
Sbjct: 1001 MSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTAR 1060
Query: 468 AGQLGRCFTLLHKDEVKRF---KKLLQK 492
AG+ G +L+++ E++ + +KL+ K
Sbjct: 1061 AGRSGVAISLVNQYELEWYVQIEKLIGK 1088
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 206/479 (43%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
A ++ PTR+LA Q+
Sbjct: 146 DQ-EPYYACILAPTRELA---------------------------------------QQI 165
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 166 KETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------III 204
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 205 ATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII------------ 252
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
P + SAT+T +KL + L +P+
Sbjct: 253 -------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS 287
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 288 -NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL--- 343
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P K
Sbjct: 344 LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSK 403
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +LR
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
>gi|15030137|gb|AAH11321.1| Ddx27 protein [Mus musculus]
Length = 572
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 217/482 (45%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 6 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 60
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF S+
Sbjct: 61 KPRQAAVTRVLVLVPTRELGIQV------------------HSVTKQLAQFCSI------ 96
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ LAVG + + EA L++A DI
Sbjct: 97 ---------------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 120
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE D++L E ++ + +
Sbjct: 121 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADKMLDEYFEEQMKEI-------------- 166
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 167 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 202
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 203 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLG 262
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
L +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 263 ---LLGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 319
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
+K Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 320 NTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 376
Query: 511 LR 512
R
Sbjct: 377 FR 378
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 207/481 (43%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 130 LVPELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL 185
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 186 WHDQ-EPYYACILAPTRELA---------------------------------------Q 205
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 206 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------I 244
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 245 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII---------- 294
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
P + SAT+T +KL + L +P+
Sbjct: 295 ---------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 327
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 328 VS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL- 385
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P
Sbjct: 386 --LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVD 443
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +L
Sbjct: 444 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTL 499
Query: 512 R 512
R
Sbjct: 500 R 500
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 188/427 (44%), Gaps = 103/427 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E + L RD+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA+Q+
Sbjct: 9 IQAEVLPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAVQI 67
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
QF+S I A+G+ +G
Sbjct: 68 ------------------------AQQFES---------------IGSAMGVRCATIIGG 88
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
I + L K+P I+VATPGRL DH+ T+GF+L L
Sbjct: 89 VDIMAQKVALAKKPH---------------------IVVATPGRLNDHLEETKGFSLRSL 127
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL + + +L++ + +T+L
Sbjct: 128 QFLVLDEADRLLDMDFGPIIDKILKVIPKER-------TTYL------------------ 162
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L +P+ + ++Y L Y L+
Sbjct: 163 -------------FSATMTTKVAKLQRASLSNPVRIEV-NSKYSTVSTLLQYYLLIPLPQ 208
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K ++L+ L +L + I+FT +V RL +L G I + G QS R L
Sbjct: 209 KDVHLIYLANTLAQNSIIIFTRTVHDAQRLSIILRTLGFPAIPL---HGQLSQSARLGAL 265
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +VLV++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ TL
Sbjct: 266 GKFKSGGRKVLVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTL 325
Query: 478 LHKDEVK 484
+ + +V+
Sbjct: 326 VTQYDVE 332
>gi|67516711|ref|XP_658241.1| hypothetical protein AN0637.2 [Aspergillus nidulans FGSC A4]
gi|40746024|gb|EAA65180.1| hypothetical protein AN0637.2 [Aspergillus nidulans FGSC A4]
gi|259489096|tpe|CBF89085.1| TPA: DEAD/DEAH box helicase, putative (AFU_orthologue;
AFUA_1G16940) [Aspergillus nidulans FGSC A4]
Length = 853
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 178/381 (46%), Gaps = 47/381 (12%)
Query: 1 MEEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
+EEA+K + LP W+ +PV S L ++P+L L+ G F VQ AV
Sbjct: 224 VEEAEKPTYSSLPPWLANPVRASAETRAKFSDL-GIEPKLLRVLEVNGYKEAFAVQAAVI 282
Query: 60 QETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
+ GP D+C+++ TGSGKTLSY LP+V L LR L+V+PTR+L Q
Sbjct: 283 PLLLKGPNNHTGDICVSAATGSGKTLSYVLPLVTELEQIPAPRLRGLIVVPTRELVKQAR 342
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
A C++C GL ++ + ++ + + + V + + G
Sbjct: 343 EA-CEFCTAGT-GLRVGSAVGNVAIKDEQRSLMRIEHVYSPESVESRRKAELTGEEWADF 400
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
S+ D IS + G + E VDIL+ TPGRL+DHI T+GFTL+HL
Sbjct: 401 SLQDYISNTTDLGETLPGYIHRGE-------PNVDILICTPGRLVDHIRYTKGFTLKHLQ 453
Query: 239 YLVVDETDRLLREAYQAWLPTVLQ-LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL E++Q W+ V+Q L F + FL SL+T
Sbjct: 454 WLVIDEADRLLNESFQEWVDVVMQSLDARKAYGAFGPSGRFLADLGMSLQTKE------- 506
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG------------------ETR 339
PR K+VLSAT+T+D +KL L L +P + G + R
Sbjct: 507 ------PR--KVVLSATMTKDVSKLNSLRLTNPRLVVVGGSDQTTTADDESGVVVHADER 558
Query: 340 YKLPERLESYKL-ICESKLKP 359
+ LP L Y + + + + KP
Sbjct: 559 FTLPTTLREYSIAVGDGEHKP 579
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R+GKI +++++D +RG+D++ + +V+NYD PA I TY+HR GRTAR
Sbjct: 719 NKSSASRKTLSAYRQGKISIIIATDRASRGLDLQSLTHVINYDVPASITTYVHRVGRTAR 778
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKADN 495
AG G +TL+ E + F + K N
Sbjct: 779 AGNEGSAWTLVAHREGRWFTNEISKGSN 806
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 207/481 (43%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 130 LVPELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL 185
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 186 WHDQ-EPYYACILAPTRELA---------------------------------------Q 205
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 206 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------I 244
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 245 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII---------- 294
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
P + SAT+T +KL + L +P+
Sbjct: 295 ---------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 327
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 328 VS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL- 385
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P
Sbjct: 386 --LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVD 443
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +L
Sbjct: 444 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTL 499
Query: 512 R 512
R
Sbjct: 500 R 500
>gi|353237187|emb|CCA69166.1| related to DRS1-RNA helicase of the DEAD box family [Piriformospora
indica DSM 11827]
Length = 767
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 215/484 (44%), Gaps = 130/484 (26%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
+L ++ + P+Q A TI L +D+ N+ TGSGKT ++ +PI++ L R
Sbjct: 190 SLTSLSFHTPTPIQAA----TIPVALLGKDIVGNAVTGSGKTAAFMIPILERLLYRQKGK 245
Query: 98 ---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A RCL V++PTR+LA+Q C + +A H+ +M
Sbjct: 246 NAAATRCL---VLVPTRELAVQ---------CFEVGTKLAAHTDIQMS------------ 281
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
L VG S+ + + L +P D+
Sbjct: 282 ------------------LVVGGLSLKAQEATLRSKP---------------------DL 302
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH+ + F L+ L LV+DE DR+L + + L +
Sbjct: 303 VIATPGRLIDHLRNSPTFNLDALDVLVLDEADRMLSDGFADELEEI-------------- 348
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
++ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 349 --------------VKSC---------PRSRQT-MLFSATMTDSVDELVKMSLNKPVRL- 383
Query: 335 TGETRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+ P+R + L+ E + LV L + E+ I+F S + H+
Sbjct: 384 -----FVDPKRATAKGLVQEFVRVKAGRESERAAILVTLCKRTFRERVIIFFRSKKLAHQ 438
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
+ + FG L ++ E G Q R +L+AFR+GK+ L+++D +RG+D++G+ V
Sbjct: 439 MRIM---FGLLDMRADELHGDLTQEQRLTSLQAFRDGKVDYLMATDLASRGLDIKGIETV 495
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS-IPS 505
+NYD P + Y+HR GRTARAG+ GR TL+ + + K K ++ ++ H +P+
Sbjct: 496 INYDMPGQLAQYLHRVGRTARAGKNGRSVTLVGEADRKMLKAAIKHGSSEDKVRHRLVPA 555
Query: 506 SLIE 509
++E
Sbjct: 556 EVVE 559
>gi|402083740|gb|EJT78758.1| ATP-dependent rRNA helicase RRP3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 485
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 202/473 (42%), Gaps = 112/473 (23%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L A + +G P+Q + I L RD+ + TGSGKT ++ALPI+
Sbjct: 62 LGIVDP-LCEACEALGYKQPTPIQT----QAIPLALQGRDVIGIAETGSGKTAAFALPIL 116
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
Q+L ++ + L LV+ PTR+LA Q+ A
Sbjct: 117 QSLLDKP-QPLFGLVLAPTRELAAQIGQA------------------------------- 144
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
F A+ + L + VG + + L K+P
Sbjct: 145 --------FEALGSLISLRCAVVVGGLDMVSQSIALGKKPH------------------- 177
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L+
Sbjct: 178 --VVVATPGRLLDHLEKTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILK--------- 226
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
FLP RR + SAT++ L + L PL
Sbjct: 227 ------FLPRE-------RRT----------------YLFSATMSSKVESLQRASLRDPL 257
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
++ R K L LI K +YL+ L+ + I+FT +V RL LL
Sbjct: 258 RVSVSSKREKTVATLLQNPLIIPHMHKDVYLIYLVNEFAGQTTIIFTRTVNEAQRLSILL 317
Query: 392 N--HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
FG + + G QS+R L F+ +LV++D RG+D+ V+ V+NY
Sbjct: 318 RTLSFGAIPL-----HGQLSQSMRLGALNKFKAKSRDILVATDVAARGLDIPEVDLVINY 372
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPIH 501
D P TYIHR GRTARAG+ GR +++ + +V+ + ++ + A D P +
Sbjct: 373 DLPGDSMTYIHRVGRTARAGRSGRAISIVTQYDVELWMRIEKAALDGRKLPTY 425
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 208/481 (43%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 87 LVPELIQACKNLNYSKPTPIQ----SKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNRL 142
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 143 WHDQ-EPYYACILAPTRELA---------------------------------------Q 162
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 163 QIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------I 201
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 202 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII---------- 251
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
P + SAT+T +KL + L +P+
Sbjct: 252 ---------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 284
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK YLV LL + I+FT + + RL L N
Sbjct: 285 V-SNKYQTVDTLVQTLMVVPGGLKNTYLVYLLNEFIGKTMIIFTRTKANAERLSGLCNL- 342
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P
Sbjct: 343 --LEFSATALHGDLNQNQRMGALDLFKAGKRAILVATDVAARGLDIPSVDIVVNYDIPVD 400
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P ++ ++I +L
Sbjct: 401 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKENVDKNIILTL 456
Query: 512 R 512
R
Sbjct: 457 R 457
>gi|226295059|gb|EEH50479.1| ATP-dependent RNA helicase dbp6 [Paracoccidioides brasiliensis
Pb18]
Length = 852
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 158/303 (52%), Gaps = 37/303 (12%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQ-----ETIGPGLFERDLCINSPTGSGKTLSYALP 89
++PRL L+ G+ FP+Q AV + E PG DLCI++ TGSGKTL+Y LP
Sbjct: 266 VNPRLVSILEKRGLIRPFPIQAAVLELLFKGENRHPG----DLCISAATGSGKTLAYTLP 321
Query: 90 IVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
+V+ + A+ LR LV++PTR+L Q A C+ C GL ++ ++ + L
Sbjct: 322 MVEGIEQSAIPQLRGLVIVPTRELVKQARDA-CELCSSGT-GLRIGTAVGTTSLKEEQAL 379
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD--PEDVLQE 207
I L Q+ F++ LS + A + E I EA + + P V
Sbjct: 380 LIKLDQLYSPFSSQT----LSEQSMSSEDWAAFNLQEYI----AEANVSHKALPNHVTTS 431
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
+DIL++TPGRL+DHI T+GFTLEHL +LVVDE DRLL E++Q W+ VL +
Sbjct: 432 -SPCIDILISTPGRLVDHIRCTQGFTLEHLEWLVVDEADRLLNESFQEWIKVVLPALEME 490
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
+ S + FL + G C V R +L K++LSAT+T+D KL L L
Sbjct: 491 RIDSNSKSGIFL-NQLG-------CQVRRR-------QLQKIILSATMTRDIPKLISLRL 535
Query: 328 HHP 330
+P
Sbjct: 536 RNP 538
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 375 IVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
+VFT S ES RL LL L +I + + + +TL A+R GK+ +++++D
Sbjct: 677 LVFTKSSESASRLARLLALMHPPLAKRIGTLTKSNKSTTSRRTLSAYRNGKVSIVIATDC 736
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
+RG+D+ + +VVNYD PA + +YIHR GRTARAG G +T + E + F + K
Sbjct: 737 ASRGLDLPSLTHVVNYDVPASLTSYIHRVGRTARAGNSGSAWTFVAHREGRWFSNEIMK- 795
Query: 494 DNDSCP 499
CP
Sbjct: 796 ----CP 797
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 193/434 (44%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 83 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 141
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 142 G---------------------------------------EQFEALGSGIGIKCCVIVGG 162
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 163 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENLKGFNLKAI 201
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 202 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 234
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ ++L+ Y L K
Sbjct: 235 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVDQLQQYYLFIPVKY 282
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 283 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 339
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 340 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITI 399
Query: 478 LHKDEVKRFKKLLQ 491
+ + +++ ++++ Q
Sbjct: 400 VSQYDIELYQRIEQ 413
>gi|312370859|gb|EFR19169.1| hypothetical protein AND_22947 [Anopheles darlingi]
Length = 490
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 195/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R A+V+ PTR+LA Q+
Sbjct: 74 IQREAIPLALNGKDIIGLAETGSGKTAAFALPILQALLDNPQRYF-AVVLTPTRELAYQI 132
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ + VG
Sbjct: 133 S---------------------------------------EQFEALGTMIGVKCCVVVGG 153
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L ++P I++ATPGRL+DH+ T+GF L+ L
Sbjct: 154 MDLVAQALQLARKPH---------------------IIIATPGRLVDHLENTKGFGLKAL 192
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 193 KYLVMDEADRILNMDFEVEVNKILRVIPRERR-------TFL------------------ 227
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + ++Y+ ++L Y + +K
Sbjct: 228 -------------FSATMTKKVKKLERASLRDPVKVEVS-SKYQTVDKLLQYYIFIPAKY 273
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T R +L G + + G Q+ R L
Sbjct: 274 KDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMTQNKRLAAL 330
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ Q+L+S+D +RG+D+ V+ V+N D P + K YIHR GRTARAG+ G+ T
Sbjct: 331 NKFKSQTRQILISTDVASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRTARAGRAGQAITF 390
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 391 VTQYDVELYQRI 402
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 205/477 (42%), Gaps = 107/477 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A+Q M S P+Q E I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 78 LVPELLEAIQQMKFSKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSL 133
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A LV+ P R+LA Q+
Sbjct: 134 WE-AQTPYFGLVLAPARELAYQI------------------------------------- 155
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
K+ F A+ +G+ VG + D+ +L+++P I
Sbjct: 156 --KETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPH---------------------I 192
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGR+MDH+ T+GF+L+ L Y V+DE D+LL + L +L+ S
Sbjct: 193 IIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIPSKR------ 246
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + LH+P+ +
Sbjct: 247 -TTYL-------------------------------FSATMTNKIEKLQRASLHNPVRVA 274
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
++Y+ + L ++ K YL+ LL + I+F + T R L
Sbjct: 275 VS-SKYQTADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRIL 333
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G Q+ R +L F+ G +L+++D RG+D+ V+ V+NYD P
Sbjct: 334 GFSAVPL---HGDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTD 390
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 511
K Y+HR GRTARAG+ G+ +L+ + +++ + ++ Q S P +++++L
Sbjct: 391 SKAYVHRVGRTARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDAL 447
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 85 IQKEAIPVALQGKDIIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 143
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 144 G---------------------------------------EQFEALGSGIGIKCCVVVGG 164
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 165 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENLKGFNLKAI 203
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 204 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 236
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ ++L+ Y + K
Sbjct: 237 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVDQLQQYYIFIPVKY 284
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 285 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 341
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 342 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITM 401
Query: 478 LHKDEVKRFKKLLQ 491
+ + +++ ++++ Q
Sbjct: 402 VTQYDIELYQRIEQ 415
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 212/481 (44%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A N+ + P+Q + I P L +D+ + TGSGKT ++A+PI+ L
Sbjct: 73 LVPELIEACDNLNFTKPTPIQ----SKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRL 128
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + A ++ PTR+LA
Sbjct: 129 WHDQ-QPYYACILAPTRELA---------------------------------------Q 148
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 149 QIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPH---------------------I 187
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF L L +LV+DE DRLL D E
Sbjct: 188 IIATPGRLMDHLENTKGFALRKLQFLVMDEADRLL-----------------DME----- 225
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
FG + ++R K+ P + SAT+T +KL + L +P+
Sbjct: 226 --------FGPV-------LDRILKNIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCA 270
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK +L+ LL + IVFT + + R+ L N
Sbjct: 271 VS-NKYQTVDTLVQTLIVVPGGLKNTFLIYLLNEFIGKTTIVFTRTKANAERISGLCNL- 328
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R+ L F+ GK +LV++D RG+D+ V+ V+NYD P
Sbjct: 329 --LEFSATALHGDLNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIPVD 386
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P ++ S++ SL
Sbjct: 387 SKSYIHRVGRTARAGRSGKSVSLVSQYDLELILRIEEVLGK----KLPKENVDKSIVLSL 442
Query: 512 R 512
R
Sbjct: 443 R 443
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 185/438 (42%), Gaps = 102/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ LV+ PTR
Sbjct: 72 YKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFF-GLVLAPTR 130
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ A F + + +
Sbjct: 131 ELAYQISQA---------------------------------------FEGLGSTISVRS 151
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 152 TVLVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDHLENTKG 190
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L +L YLV+DE DRLL + L +L++ LP RR
Sbjct: 191 FSLRNLKYLVMDEADRLLDMDFGPILDKILKV---------------LPRE-------RR 228
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L +PL + ++++ L+ +
Sbjct: 229 T----------------YLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYI 272
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K LYLV LL + CI+F +V T RL L G I + G QS
Sbjct: 273 FIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLH---GQLSQS 329
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR +LV++D RG+D+ V+ V+N+D P KT+IHR GRTARAG+
Sbjct: 330 ARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKS 389
Query: 472 GRCFTLLHKDEVKRFKKL 489
G + + +V+ + ++
Sbjct: 390 GVAISFATQYDVEAWLRI 407
>gi|302795308|ref|XP_002979417.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
gi|300152665|gb|EFJ19306.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
Length = 749
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 200/438 (45%), Gaps = 111/438 (25%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 103
+G P+Q A I L RD+C ++ TGSGKT ++ALPI++ L R R +R
Sbjct: 135 LGYRQPTPIQAAC----IPLALAGRDICGSAVTGSGKTAAFALPILERLLFRPRRIPAIR 190
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
L++ PTR+LA+Q+ HS+ E QF +
Sbjct: 191 VLIITPTRELAVQL------------------HSMIEKLAQFTDI--------------- 217
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
L VG G SS E++ L++ DI+VATPGR++
Sbjct: 218 --RCSLVVG---GLSSKVQEVA----------------------LRTHPDIVVATPGRMI 250
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ T+ LE L LV+DE DRLL ++ + +++L PS
Sbjct: 251 DHLRNTQSVGLEELAILVLDEADRLLELGFREEIHELVKL---------------CPS-- 293
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT---TGETRY 340
R M+ SAT+T + ++L +L L P+ L+ + E
Sbjct: 294 ---------------------RRQTMLFSATMTDEVSELIKLSLKSPVRLSADPSTERPS 332
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
L E + + E + + L +SL + K I+F+ + HRL L FG +K
Sbjct: 333 TLTEEVIRIRAGHEGDKEAIVLSLCSRSL-KSKTIIFSGTKVEAHRLKIL---FGLSGLK 388
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E G Q+ R + L+AFR+ ++ L+++D RG+D+ GV +V+N + P IKTY+H
Sbjct: 389 SAELHGNLTQAQRLEALEAFRKQEVDFLIATDVAARGLDIIGVESVINLECPKEIKTYVH 448
Query: 461 RAGRTARAGQLGRCFTLL 478
R GRTARAG+ GR TL+
Sbjct: 449 RVGRTARAGRHGRSVTLM 466
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 185/438 (42%), Gaps = 102/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ LV+ PTR
Sbjct: 72 YKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFF-GLVLAPTR 130
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ A F + + +
Sbjct: 131 ELAYQISQA---------------------------------------FEGLGSTISVRS 151
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 152 TVLVGGMDMVSQSIALGKKPH---------------------IIVATPGRLLDHLENTKG 190
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L +L YLV+DE DRLL + L +L++ LP RR
Sbjct: 191 FSLRNLKYLVMDEADRLLDMDFGPILDKILKV---------------LPRE-------RR 228
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L +PL + ++++ L+ +
Sbjct: 229 T----------------YLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYI 272
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K LYLV LL + CI+F +V T RL L G I + G QS
Sbjct: 273 FIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLH---GQLSQS 329
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR +LV++D RG+D+ V+ V+N+D P KT+IHR GRTARAG+
Sbjct: 330 ARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKS 389
Query: 472 GRCFTLLHKDEVKRFKKL 489
G + + +V+ + ++
Sbjct: 390 GVAISFATQYDVEAWLRI 407
>gi|401885525|gb|EJT49639.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
gi|406694842|gb|EKC98161.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 804
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 206/475 (43%), Gaps = 109/475 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
AL ++G ++ P+Q + L RD+ ++ TGSGKT ++ +PI++ L R
Sbjct: 222 ALSSLGFNAPTPIQ----SRAVPLALLGRDILGSAVTGSGKTAAFMIPILERLQYRDRGK 277
Query: 98 -AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
C R LV+ PTR+LA+Q C Q
Sbjct: 278 GGAAC-RVLVLCPTRELAVQ-------------------------CEQ------------ 299
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
V A+A GL V A+ L G+ + + L++ DIL+
Sbjct: 300 --VGKALAERGGLDVRFAL-----------------LVGGLSLNAQ--AHALRTLPDILI 338
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH+ T FTL L LV+DE DR+L + L +
Sbjct: 339 ATPGRLIDHLTNTPSFTLGALDILVIDEADRMLEAGFTDELEEI---------------- 382
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
+R+C P R M+ SAT+T ++L +L L P+ +
Sbjct: 383 ------------VRQC---------PRGRQT-MLFSATMTDSVDELVKLSLDRPVRVFVD 420
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ R + + + + + L+ L + EK I+F S H++ + FG
Sbjct: 421 KERNTAAGLTQEFVRVRSEETRSPALLTLCKRTVHEKAIIFFRSKALAHQMRVV---FGL 477
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+ E G Q R L F+ G++ L+++D +RG+D++GV V+NYD P +
Sbjct: 478 CGLVAAELHGNLTQEQRLVALNDFKAGRVDYLLATDLASRGLDIKGVETVINYDMPGQLA 537
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 511
Y+HR GRTARAG+ GR +L+ + + K K +++++D D IP ++++
Sbjct: 538 QYVHRVGRTARAGRKGRSISLVGEPDRKMLKAVMKRSDKDQIRHRIIPPEAVQAM 592
>gi|384493436|gb|EIE83927.1| hypothetical protein RO3G_08632 [Rhizopus delemar RA 99-880]
Length = 711
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 199/446 (44%), Gaps = 106/446 (23%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
G++SL F + +TI L +D+C + TGSGKT ++ +PI++ L R R
Sbjct: 230 GVTSLGFVKPTPIQSQTIPIALMGKDICGGAATGSGKTAAFVIPILERLLYRPRQTPSTR 289
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
L++ PTR+LA QV HS A V+F
Sbjct: 290 VLILCPTRELAAQV------------------HSAA---VKF------------------ 310
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
A ++ L VG S+ + EL +P D++VATPGRL+
Sbjct: 311 AAYTDITFCLCVGGLSLKTQEQELKLKP---------------------DVVVATPGRLI 349
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ T GF L+ LV+DE DR+L + + L +
Sbjct: 350 DHVRNTSGFHLDACEILVMDEADRMLEDGFADELGEI----------------------- 386
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 343
++ C P R M+ SAT+T + ++L ++ LH+P+ L +
Sbjct: 387 -----VKSC---------PKSRQT-MLFSATMTDNVDQLIRMSLHNPVRLFVDRSNQAAS 431
Query: 344 ERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
++ + I +++ + L+AL + + K I+F S + H++ L FG + +
Sbjct: 432 RLIQEFVRIRQAREADRSAVLLALCKKSFKNKVIIFFRSKAAAHQMKIL---FGLMGLNA 488
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E G Q R + L+ FR+ ++ L+++D RG+D++G+ V+NY+ P Y+HR
Sbjct: 489 AELHGNLTQEQRLEALEQFRDNQVDYLLATDLAARGLDIKGIETVINYNMPTQFAQYLHR 548
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFK 487
GRTARAG+ GR TL+ + + K K
Sbjct: 549 VGRTARAGRNGRSVTLVGESDRKMLK 574
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 103/434 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 90 IQKEAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 148
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 149 G---------------------------------------EQFEALGSGIGIKCCVVVGG 169
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 170 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENLKGFNLKAI 208
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 209 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 241
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ ++L+ Y + K
Sbjct: 242 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVDQLQQYYIFIPVKY 289
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 290 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 346
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 347 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITM 406
Query: 478 LHKDEVKRFKKLLQ 491
+ + +++ ++++ Q
Sbjct: 407 VTQYDIELYQRIEQ 420
>gi|389751392|gb|EIM92465.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 812
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 220/497 (44%), Gaps = 132/497 (26%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK AL +G ++ P+Q A TI GL +D+ N+ TGSGKT ++ +P+++ L
Sbjct: 224 PVLK-ALTTLGFNTPTPIQAA----TIPVGLLGKDVVGNAVTGSGKTAAFIIPMIERLLY 278
Query: 95 --SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ R L+++PTR+LA+Q C + + H+ + C
Sbjct: 279 RDKGKKAAATRCLILVPTRELAVQ---------CYEVGKKLGTHTDIQFC---------- 319
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
L VG S+ + L RP
Sbjct: 320 --------------------LIVGGLSLKSQEVALRARP--------------------- 338
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
D+++ATPGRL+DH+ + FTL+ L LV+DE DR+L + + L ++Q
Sbjct: 339 DVVIATPGRLIDHLRNSPSFTLDALDILVLDEADRMLSDGFADELTEIIQ---------- 388
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
S T R+ M+ SAT+T ++L ++ L+ P+
Sbjct: 389 ------------SCPTSRQT----------------MLFSATMTDSVDELVKMSLNKPVR 420
Query: 333 LTTGETRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVEST 384
L + P+R + L+ E + LVAL + + ++F S +
Sbjct: 421 L------FVDPKRSTARGLVQEFVRVRAGKESDRSALLVALCKRTFKSGVLIFFRSKKLA 474
Query: 385 HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
H++ + + G + +E G Q R K+L+ FR+G + L+++D +RG+D++G++
Sbjct: 475 HQVRIMFSLLG---MSCEELHGDLSQEQRLKSLQLFRDGAVDYLMATDLASRGLDIKGID 531
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ-KADNDSCPIHSI 503
V+N+D P + Y+HR GRTARAG+ GR TL+ + + K K ++ A D ++
Sbjct: 532 TVINFDMPGQLAQYLHRVGRTARAGKKGRSVTLVGEADRKMLKAAIKHSAGADQVRHRTV 591
Query: 504 PSSLI-------ESLRP 513
P ++ +SL+P
Sbjct: 592 PPEIVAKYVKKLDSLKP 608
>gi|405122110|gb|AFR96877.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus neoformans var.
grubii H99]
Length = 484
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 213/494 (43%), Gaps = 114/494 (23%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCP-LDHLPC-----LDPRLKVALQNMGISSLFPVQ 55
+E+ S P P+ RSP D P H + P L A +MG +Q
Sbjct: 7 QESATMSQPGSPF-RSPSPAPSNPDAPEASHNKTFADLGISPELCRACASMGFKKPSDIQ 65
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
E I L +D+ + TGSGKT +++LPI+QTL + ALV+ PTR+LA
Sbjct: 66 A----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTLWENP-QPFFALVLAPTRELAY 120
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q++ QV ++ +G+ + V
Sbjct: 121 QISQ-----------------------------------QV----TSLGSGIGVRTAVLV 141
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + + L KRP ++VATPGRLMDH+ T+GF+L+
Sbjct: 142 GGMDMMSQSIALSKRPH---------------------VIVATPGRLMDHLENTKGFSLK 180
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L YLV+DE DRLL + + VL++ + +T+L
Sbjct: 181 SLKYLVMDEADRLLDLDFGPIIDKVLKVIPKER-------NTYL---------------- 217
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T KL + L+ P+ + ++Y L + L+
Sbjct: 218 ---------------FSATMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPL 261
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YL+ L L I+FT +V + RL +L G I + G QS+R
Sbjct: 262 KNKDAYLLYLANELSSSSMIIFTRTVADSQRLSIILRRLGFPAIPLH---GQMTQSLRLA 318
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
+L F+ G +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G+
Sbjct: 319 SLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSI 378
Query: 476 TLLHKDEVKRFKKL 489
TL+ + +V+ +++
Sbjct: 379 TLVTQYDVEILQRI 392
>gi|397475811|ref|XP_003809313.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Pan paniscus]
Length = 605
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 215/485 (44%), Gaps = 90/485 (18%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 6 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 60
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 61 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 93
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 94 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 120
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS-DNENRFS 273
L+ATPGRL+DH++ F L + L++DE D PT+ L S
Sbjct: 121 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADSPPVGTACPHAPTLWLLHLPFPQPGAIS 180
Query: 274 DASTFLPSAFGSL--KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
L F + IR C R M+ SAT+T + LA + L +P+
Sbjct: 181 CPFRMLDEYFEEQMKEIIRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPV 230
Query: 332 FLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
+ P + + I ++ + + ALL + ++FT + + HR+
Sbjct: 231 RIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHI 290
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
LL G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+
Sbjct: 291 LLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINF 347
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSL 507
P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +
Sbjct: 348 TMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDV 404
Query: 508 IESLR 512
I R
Sbjct: 405 ILKFR 409
>gi|440636791|gb|ELR06710.1| hypothetical protein GMDG_00327 [Geomyces destructans 20631-21]
Length = 787
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 228/519 (43%), Gaps = 123/519 (23%)
Query: 1 MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
+EEA ++ P +S + E ++ P + L G S+ P+Q
Sbjct: 237 VEEAARRDAFFAPEEKSEKTATKGEVLSFQNMSLSRP-IHRGLAACGFSAPTPIQA---- 291
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVN 118
+TI L +D+ + TGSGKT ++ +P+++ L R V R +++PTR+LA+Q
Sbjct: 292 KTIPVALLGKDVVGGAVTGSGKTAAFIVPVLERLLYRPKKVPTSRVAILMPTRELAIQ-- 349
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
C H++A + + F LAVG
Sbjct: 350 -------C---------HAVATKLASYTDIKFC---------------------LAVGGL 372
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
S+ + +EL RP DI++ATPGR +DH+ + FT++ L
Sbjct: 373 SLKIQEAELRLRP---------------------DIIIATPGRFIDHMRNSPSFTVDTLE 411
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
LV+DE DR+L + + L +L T +P S +T
Sbjct: 412 ILVLDEADRMLEDGFADELNEIL---------------TTIPK---SRQT---------- 443
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
M+ SAT+T +KL ++ L+ P+ L R + ++ + +L+
Sbjct: 444 ----------MLFSATMTSSVDKLIRVGLNRPVRLMVDAQRSTVTTLVQEF-----VRLR 488
Query: 359 PL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
P YL+ L Q + K IVF + HR + FG +K E G Q
Sbjct: 489 PGREDKRMGYLLYLCQKVFHNKVIVFFRQKKEAHRARVI---FGLSGMKAAELHGSLSQE 545
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R +++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++ Y+HR GRTARAG+
Sbjct: 546 QRIASVEAFRDGKVSYLLATDLASRGLDIKGVDTVINYEAPQSLEIYLHRVGRTARAGRS 605
Query: 472 GRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 510
GR TL + + K K ++ A + I S +IES
Sbjct: 606 GRACTLAAEPDRKVVKAAVKTARSQGA---KIASRVIES 641
>gi|225681311|gb|EEH19595.1| ATP-dependent RNA helicase DBP6 [Paracoccidioides brasiliensis
Pb03]
Length = 836
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 158/303 (52%), Gaps = 37/303 (12%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQ-----ETIGPGLFERDLCINSPTGSGKTLSYALP 89
++PRL L+ G FP+Q AV + E PG DLCI++ TGSGKTL+YALP
Sbjct: 272 VNPRLVSILEKRGFIRPFPIQAAVLELLFKGENRHPG----DLCISAATGSGKTLAYALP 327
Query: 90 IVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
+V+ + A+ LR LV++PTR+L Q A C+ C GL ++ ++ + L
Sbjct: 328 MVEGIEQSAIPKLRGLVIVPTRELVKQARDA-CELCSSGT-GLRIGTAVGTTSLKEEQAL 385
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD--PEDVLQE 207
I L Q+ F++ LS + A + E I EA + + P V
Sbjct: 386 LIKLDQLYSPFSSQT----LSEQSMSSEDWAAFNLQEYI----AEANVSHKALPNHVTTS 437
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
+DIL++TPGRL+DHI T+GFTLEHL +LVVDE DRLL E++Q W+ VL +
Sbjct: 438 -SPCIDILISTPGRLVDHIRCTQGFTLEHLEWLVVDEADRLLNESFQEWIKVVLPALEME 496
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
+ S + FL + G + RR +L K++LSAT+T+D KL L L
Sbjct: 497 RIDSNSKSGIFL-NQLG-FQIHRR-------------QLQKIILSATMTRDIPKLISLRL 541
Query: 328 HHP 330
+P
Sbjct: 542 RNP 544
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 375 IVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
+VFT S ES RL LL L +I + + + +TL A+R GK+ +++++D
Sbjct: 683 LVFTKSSESASRLARLLALMHPPLAKRIGTLTKSNKSTTSRRTLSAYRNGKVSIVIATDC 742
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRA-GRTARA--GQLG 472
+RG+D+ + +VVNYD PA + +YIHR GR AR GQ G
Sbjct: 743 ASRGLDLPSLTHVVNYDVPASLTSYIHRVDGRLARGTPGQHG 784
>gi|170583206|ref|XP_001896476.1| ATP-dependent RNA helicase T26G10.1 in chromosome III [Brugia
malayi]
gi|158596304|gb|EDP34674.1| ATP-dependent RNA helicase T26G10.1 in chromosome III, putative
[Brugia malayi]
Length = 462
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 187/421 (44%), Gaps = 103/421 (24%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIG---------- 109
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
+ F A+ ++G+ + + VG + L
Sbjct: 110 -----------------------------EQFEALGASIGILIAVIVGGVDTVTQSLALA 140
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
KRP ++VATPGRL+DH+ T+GF L L YLV+DE DR+
Sbjct: 141 KRP---------------------HVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L ++ L +L++ + T+L
Sbjct: 180 LNMDFEVELEKILKVIPKERR-------TYL----------------------------- 203
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 368
SAT+T+ KL + L+ P+ + ++Y+ ++L+ Y + K K YL+ +L
Sbjct: 204 --YSATMTKKVAKLERASLNDPVRIEVS-SKYQTVDKLKQYYIFIPYKYKEAYLIYILNE 260
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
+ + IVF S+ S + +L G + + G Q+ R +L F+ VL
Sbjct: 261 MAGQTAIVFCSTCASALKTALMLRKLGFGAVPL---HGQMSQAKRLGSLNKFKSKASTVL 317
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
V +D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T + + +V+ ++K
Sbjct: 318 VCTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTARAGRSGVAITFVTQYDVEIYQK 377
Query: 489 L 489
+
Sbjct: 378 I 378
>gi|321257748|ref|XP_003193695.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317460165|gb|ADV21908.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 790
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 202/475 (42%), Gaps = 107/475 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
AL ++ ++ P+Q I L RD+ ++ TGSGKT ++ +PI++ L +
Sbjct: 218 ALTSLQFTAPTPIQA----RAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGK 273
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
R LV+ PTR+LA+Q C+ K
Sbjct: 274 GGAACRVLVLCPTRELAVQ-----CEAVGK------------------------------ 298
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
A+A GL V A+ L G+ + + L++ DIL+A
Sbjct: 299 ----ALAEKGGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIA 335
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DH+ T FTL L LV+DE DR+L + L +
Sbjct: 336 TPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI----------------- 378
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
I+ C P R M+ SAT+T ++L +L L P+ +
Sbjct: 379 -----------IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDP 417
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
R + + I + L+AL + EKCI+F S H++ + FG
Sbjct: 418 KRNTAKGLTQEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFG-- 475
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R + L F+ + L+++D +RG+D++GV V+NYD P +
Sbjct: 476 -LKAAELHGNLTQEQRLQALNDFKASTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQ 534
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
Y HR GRTARAG+ GR +L+ + + K K +++A+ D IPS + +++
Sbjct: 535 YTHRVGRTARAGRKGRSISLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMK 589
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 196/432 (45%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L + R A+V+ PTR+LA Q+
Sbjct: 82 IQREAIPLALQGKDIIGLAETGSGKTGAFALPILQALLDNPQRYF-AVVLTPTRELAYQI 140
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ +G+ + VG
Sbjct: 141 S---------------------------------------EQFEALGATIGVKCCVIVGG 161
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L ++P I++ATPGRL+DH+ T+GF+L+ +
Sbjct: 162 MDLVTQAIQLARKPH---------------------IIIATPGRLVDHLENTKGFSLKAI 200
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++ + TFL
Sbjct: 201 RYLVMDEADRILNMDFEEEVNKILKVMPRERR-------TFL------------------ 235
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L P+ + ++Y+ E+L Y L ++
Sbjct: 236 -------------FSATMTKKVKKLERASLRDPVKVEVS-SKYQTVEKLLQYYLFIPARY 281
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T R +L G + + G Q+ R L
Sbjct: 282 KNVYLVHVLNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPL---HGQMTQNKRLAAL 338
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ Q+L+S+D +RG+D+ V+ V+N D P + K YIHR GRTARAG+ G+ T
Sbjct: 339 NKFKSQARQILISTDVASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRTARAGRAGQAITF 398
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 399 VTQYDVELYQRI 410
>gi|367007110|ref|XP_003688285.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
gi|357526593|emb|CCE65851.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
Length = 755
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 197/449 (43%), Gaps = 113/449 (25%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G + P+Q A TI GL +D+ + TGSGKT ++ +PI++ L
Sbjct: 230 PVLK-GLSDLGYTKPSPIQSA----TIPIGLLGKDIIAGAVTGSGKTAAFMIPIIERLLY 284
Query: 97 R--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+ PTR+LA+QV+
Sbjct: 285 KPANIASTRVIVLTPTRELAIQVS------------------------------------ 308
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV I V GL+ GLAVG ++ + EL RP D
Sbjct: 309 ---DVGKRIGKYVNGLTFGLAVGGLNLRQQEQELKTRP---------------------D 344
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
+++ATPGR +DHI + F ++ + LV+DE DR+L + +Q L ++ L
Sbjct: 345 VVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQEELNEIMSL---------- 394
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
LP+ +L + SAT+ +L L L P+ +
Sbjct: 395 -----LPTKRQTL-----------------------LFSATMNSKIKQLISLSLRRPVRI 426
Query: 334 TTGETRYKLPERLESYKLICESK-LKP---LYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
+ + + I + LKP YL+ L S +++ +VF S E HRL
Sbjct: 427 MINPPKQAAARLTQEFVRIRKRDLLKPALLYYLIRKLDSSSQKRIVVFVSRKEMAHRLRI 486
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
++ G L +K+ E G Q R +++ F+ ++ VL+ +D +RG+D+ + V+NY
Sbjct: 487 IM---GLLGMKVAELHGSLTQEQRLQSVNQFKSLEVPVLICTDLASRGLDIPKIEVVINY 543
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
D P + Y+HR GRTARAG+ GR T +
Sbjct: 544 DMPKSYEIYLHRVGRTARAGREGRSVTFV 572
>gi|313228985|emb|CBY18137.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 190/433 (43%), Gaps = 103/433 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQ 116
+ Q++I + +D+ + TGSGKT ++A+P++QTL L LV+ PTR+LA Q
Sbjct: 50 IQQKSIPIAIEGKDVIGLAETGSGKTAAFAIPVLQTLLKTPGGGRLSCLVMTPTRELAFQ 109
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
+ ++ F A+ ++GLS VG
Sbjct: 110 I---------------------------------------REQFQALGSSIGLSCACIVG 130
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ + L K+P ++VATPGRL+DH+ TRGF L+
Sbjct: 131 GIEMMSQQLALAKKP---------------------HVIVATPGRLVDHLEKTRGFNLKA 169
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L +L++DE DR+L ++A + +L+ + +
Sbjct: 170 LKFLIMDEADRILNLDFEAEVDKILRAIPRERQT-------------------------- 203
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
M+ SAT+T KL + L +P+ ++ + + ++ Y I E+
Sbjct: 204 ------------MLFSATMTAKVKKLQRAALKNPVKISINSKYKTVDKNIQKYMFIPEAH 251
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K YLV+LL L ++FTS+ T + L+ G + + G Q R
Sbjct: 252 -KECYLVSLLNELQGSSFMIFTSTCAKTSLIARLVKRLGYDSVPL---HGQMSQQKRLGA 307
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ +LV +D +RG+DV V+ V+NYD P K YIHR GRTARAG+ G+ T
Sbjct: 308 LARFKGKSRSILVCTDVASRGLDVPHVDCVINYDVPTNTKDYIHRVGRTARAGRAGKSVT 367
Query: 477 LLHKDEVKRFKKL 489
+ + +V+ ++K+
Sbjct: 368 FVSQYDVELYQKI 380
>gi|403164869|ref|XP_003324940.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165434|gb|EFP80521.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 518
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 199/456 (43%), Gaps = 109/456 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A + + P+Q E+I L +RD+ + TGSGKT ++ALP++Q+L
Sbjct: 79 LIPELCEACRTLNYKRPTPIQA----ESIPYALEDRDIIGLAQTGSGKTAAFALPVLQSL 134
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
N + V+ PTR+LA Q++ QFD
Sbjct: 135 WNDP-KPFFCCVLAPTRELAYQISQ------------------------QFD-------- 161
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
A+ +G+ + VG + + L KRP I
Sbjct: 162 -------ALGSTIGVKTAVIVGGIDMMSQAIALSKRPH---------------------I 193
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGRL DH+ T+GF+L +L YL++DE DRLL + + +L++
Sbjct: 194 IVATPGRLHDHLENTKGFSLRNLKYLIMDEADRLLDMDFGPVIDKILKVI---------- 243
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFL 333
PR + L SAT+T KL + L P+ +
Sbjct: 244 -----------------------------PRERRTYLFSATMTTKVAKLQRASLVSPVKV 274
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
T+Y + L + K K YLV L+ L + I+FT +V +RL +L
Sbjct: 275 QMS-TKYDTVDGLVQLYMFFPFKNKDAYLVYLVNELSGKSMIIFTRTVYDANRLSIILRL 333
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G I + G QS R +L F+ G +LV++D +RG+D+ V+ V+N+D P
Sbjct: 334 LGFPSIPLH---GQLSQSTRLSSLNQFKSGNRSILVATDVASRGLDIPTVDCVINFDLPT 390
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
K YIHR GRTARAG+ G+ TL+ + +V+ +++
Sbjct: 391 NSKDYIHRVGRTARAGRSGKAVTLVTQYDVELLQRI 426
>gi|331219074|ref|XP_003322214.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301204|gb|EFP77795.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 785
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 205/482 (42%), Gaps = 124/482 (25%)
Query: 26 DCPLDHLP---CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGK 82
D P LP L + + L +M I+S P+Q ++ I GL +DL +S TGSGK
Sbjct: 242 DQPFSSLPGAASLSRPVLLGLSSMSITSPTPIQ----RQAIPLGLLGKDLVCSSVTGSGK 297
Query: 83 TLSYALPIVQTLSNRAVRC---LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIA 139
TL Y +PIV+ L R + R +++ PTR+LA+QV +
Sbjct: 298 TLGYMVPIVERLIWRDKKGGGRTRVMILTPTRELAVQV------------------FQVG 339
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 199
++ +F L F L VG + + +EL +RP
Sbjct: 340 KLLARFTDLTF---------------------SLCVGGMDLRTQEAELRERP-------- 370
Query: 200 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 259
+I++ TPGR++DHI TRGF+LE L LV+DE DR+L E +Q L
Sbjct: 371 -------------EIVIGTPGRVIDHIRNTRGFSLETLEILVIDEADRILEEGFQDELEE 417
Query: 260 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 319
+ I C P R M+ SAT+ +
Sbjct: 418 I----------------------------ISNC---------PRSRQT-MLFSATVNESV 439
Query: 320 NKLAQLDLHHPLFLTTG---ETRYKLPERLESYKLICESK--------LKPLYLVALLQ- 367
LA+L L P+ + T L + K +K + LV L +
Sbjct: 440 ADLAKLSLDKPIRIKIDPPKSTAAGLTQEFLKVKDSASNKKAASLTDVTRQAILVTLCKA 499
Query: 368 -SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 426
+ + + I+F S HR+ + + F +K +E G Q R L+ F++G+
Sbjct: 500 SAFSKGRTIIFFRSKVGAHRMKIIFSLFS---LKAEELHGNLNQQQRLAALQKFKDGETS 556
Query: 427 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
L+++D +RG+D++GV V+NY+ P Y+HR GRTARAG G TL+ + + K
Sbjct: 557 FLLATDLASRGLDIKGVERVINYEPPTQYDVYLHRIGRTARAGTKGSALTLVGESDRKLI 616
Query: 487 KK 488
K+
Sbjct: 617 KE 618
>gi|195381768|ref|XP_002049617.1| GJ21693 [Drosophila virilis]
gi|194144414|gb|EDW60810.1| GJ21693 [Drosophila virilis]
Length = 784
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP V+ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTVERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQETVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T F+L+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFSLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ S IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIEKYR 540
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 153
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 154 G---------------------------------------EQFEALGSGIGIKCCVVVGG 174
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 175 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 213
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 246
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 247 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 294
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 295 KDVYLVHILNELSGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 351
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 352 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 411
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 412 VSQYDIELYQRI 423
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 199/455 (43%), Gaps = 107/455 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+DP++ A + +G F + ++ I L +D+ + TGSGKT ++++P++Q L
Sbjct: 20 VDPQIVEACKKLG----FKNPTEIQRKAIPEALAGKDIVGLAQTGSGKTAAFSIPMLQAL 75
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ L LV+ PTR+LA+Q++
Sbjct: 76 LAKP-SGLFGLVLAPTRELAVQIS------------------------------------ 98
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
D A+ +G+ + VG + L K+P I
Sbjct: 99 ---DQIEALGAVIGVKCAVLVGGIDTMSQSMALAKKPH---------------------I 134
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+V TPGR++ H+ T+GF L+ L Y V+DE DRLL ++ + T+L++ D
Sbjct: 135 IVGTPGRVVYHLENTKGFNLKTLKYFVMDEADRLLGMDFEEEINTILKVIPKDR------ 188
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+TFL SAT+T KL + L+ P+ +
Sbjct: 189 -NTFL-------------------------------FSATMTSKVAKLQRASLNDPVKIQ 216
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
T+Y + L+ + K K YL +L L I+FTS+ ++ +L +L +
Sbjct: 217 VA-TKYSTVDTLQQEYIFIPYKHKECYLTYILNELAGNSVIIFTSTCAASTKLAIMLRN- 274
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L K +G QS R +L F+ + +LV++D RG+D+ V+ V+NYD P
Sbjct: 275 --LSFKAIPINGQMDQSKRLSSLNKFKAQTMDILVATDVAARGLDIPSVDLVINYDVPVS 332
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
K Y+HR GRTARAG+ GR TL+ + +V+ + ++
Sbjct: 333 SKEYMHRVGRTARAGRTGRAVTLVTQYDVEIYLRI 367
>gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]
Length = 414
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 189/433 (43%), Gaps = 101/433 (23%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
+ Q+ I L RD+ + TGSGKT ++ALP++Q L + R L A+V+ PTR+LA Q
Sbjct: 59 GIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQR-LFAVVLAPTRELAFQ 117
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
++ +VF A+ ++GL VG
Sbjct: 118 IH---------------------------------------EVFEALGASIGLKSCCVVG 138
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ + L ++P ++VATPGRL+DH+ T+GF +
Sbjct: 139 GVDMMTQAIALARKPH---------------------VVVATPGRLVDHLENTKGFHIRE 177
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
+LV+DE DR+L ++ + +L + + R
Sbjct: 178 ARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRR------------------------- 212
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
++ SAT+T KL + L P+ + + ++ P L L +K
Sbjct: 213 -----------TLLFSATMTSKVAKLQRASLTDPVKVEASD-KFTTPRTLVQQYLFIPAK 260
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K YL L + +VF ++ + RL LL + G I + G Q R
Sbjct: 261 YKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICL---HGQMTQPKRLGA 317
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ G+ +L+++D +RG+D+ V+ V+N+D P++ K YIHR GRTARAG+ GR
Sbjct: 318 LHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIA 377
Query: 477 LLHKDEVKRFKKL 489
++ + +V+ +++L
Sbjct: 378 MVTQYDVEVYQRL 390
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 91 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 149
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 150 G---------------------------------------EQFEALGSGIGIKCCVVVGG 170
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 171 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 209
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 210 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 242
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 243 -----------FLFSATMTKKVKKLQRASLKDPVKIEVS-NKYQTVEQLQQSYLFIPVKY 290
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 291 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 347
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 348 NKFKTKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 407
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 408 VSQYDIELYQRI 419
>gi|388502288|gb|AFK39210.1| unknown [Lotus japonicus]
Length = 460
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 193/421 (45%), Gaps = 101/421 (23%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
+RD+ + TGSGKT ++ALPI+Q L R L ALV+ PTR+LA Q++
Sbjct: 47 KRDIIGLAETGSGKTGAFALPILQALLATPQR-LFALVLTPTRELAYQIS---------- 95
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
+ F A+ ++G+ + VG + + L
Sbjct: 96 -----------------------------EQFEALGSSIGVKCAVIVGGMDMMSQSIALA 126
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
K+P I++ATPGRL+DH+ T+GF+L + YLV+DE DR+
Sbjct: 127 KKPH---------------------IVIATPGRLVDHLENTKGFSLRSIQYLVMDEADRI 165
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L ++ L +L++ LP P
Sbjct: 166 LNMDFEVDLDKILKI---------------LP---------------------PSSTRST 189
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 368
+ SAT+T+ KL + L P+ + + +Y ++L+ L SK K +YLV++L
Sbjct: 190 YLYSATMTKKVAKLQRASLRDPIKIEVSD-KYATVDKLQQTYLFIPSKFKDVYLVSILND 248
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
+ + IVF S+ +T RL L + G + + G Q+ R L F+ +L
Sbjct: 249 MSGKSIIVFASTCTTTLRLALLTRNLGFTTVPL---HGQMSQTKRLGALNKFKGKARSIL 305
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
+++D +RG+D+ V+ V+NYD P + K YIHR GRTARAG+ G+ T + + +++ +++
Sbjct: 306 IATDVASRGLDIPHVDVVINYDIPNHSKDYIHRVGRTARAGRSGKSITFVTQYDIELYQR 365
Query: 489 L 489
+
Sbjct: 366 I 366
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 208/481 (43%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 90 LVPELIQACKNLNYSKPTPIQ----SKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNRL 145
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 146 WHDQ-EPYYACILAPTRELA---------------------------------------Q 165
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 166 QIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------I 204
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 205 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII---------- 254
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
P + SAT+T +KL + L +P+
Sbjct: 255 ---------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 287
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 288 V-SNKYQTVDTLVQALMVVPGGLKNTYLIYLLNESIGKTMIIFTRTKANAERLSGLCNL- 345
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P
Sbjct: 346 --LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVD 403
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L + P ++ S+I +L
Sbjct: 404 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGR----KLPKENVDKSIILTL 459
Query: 512 R 512
R
Sbjct: 460 R 460
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 193/443 (43%), Gaps = 108/443 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G ++ P+Q + I L RDL + TGSGKT ++ LP++Q L ++ +
Sbjct: 42 ACEELGYTAPTPIQ----ERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQALMDKP-QQ 96
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
+L++ PTR+LA Q+ H++
Sbjct: 97 FHSLILAPTRELAQQIA-----------------HTVE---------------------- 117
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + L +G + + L K+P ++VATPGR
Sbjct: 118 ALGARISVRCTLLIGGMDMISQAIALGKKPH---------------------VIVATPGR 156
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L+L LP
Sbjct: 157 LLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRL---------------LP- 200
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
K K Y + SAT++ L + L P+ ++
Sbjct: 201 -----------------KRKTY------LFSATMSSKVESLQRASLSDPVRVSVSTKNQT 237
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L+SY L K K YLV LL + I+FT +V T RL +L + G I I
Sbjct: 238 ASKLLQSY-LFIPHKFKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPI 296
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R +L FR +L+++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 297 H---GQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHR 353
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G F+ + + EV+
Sbjct: 354 VGRTARAGKSGIAFSFVTQYEVE 376
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 189/433 (43%), Gaps = 102/433 (23%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
++ ++I L RD+ + TGSGKT ++ALP++Q L + + L LV+ PTR+LA Q
Sbjct: 75 SIQAKSIPVALQGRDVIGLAETGSGKTAAFALPMLQALLEKP-QPLFGLVLAPTRELAAQ 133
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
+ F A+ + L + VG
Sbjct: 134 IG---------------------------------------QTFEALGALISLRCAVIVG 154
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ + L K+P ++VATPGRL+DH+ T+GF+L
Sbjct: 155 GLDMVPQAIALGKKPH---------------------VIVATPGRLVDHLEKTKGFSLRT 193
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 194 LKYLVMDEADRLLDMDFGPSIDKLLK---------------FVPRE-------RRT---- 227
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
+ SAT++ L + L P+ ++ ++Y+ L + +
Sbjct: 228 ------------YLFSATMSSRVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYVFIPHI 275
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K YL+ ++ + CIVFT +V T R+ LL G I + G QS R
Sbjct: 276 RKDTYLIHIINEFAGKSCIVFTRTVYETQRVAILLRTLGFGAIPLH---GQLSQSARLGA 332
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L FR G ++LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G +
Sbjct: 333 LNKFRGGTREILVATDVAARGLDIPKVDIVLNYDIPSDSKTYIHRVGRTARAGKSGVAIS 392
Query: 477 LLHKDEVKRFKKL 489
L+ + +++ F ++
Sbjct: 393 LVTQYDLELFTRI 405
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 184/437 (42%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q +++I L RD+ + TGSGKT ++ALP++Q L +
Sbjct: 75 ATEALGYKHPTPIQ----EKSIPLALAGRDVIGLAETGSGKTAAFALPVLQALLEKP-SG 129
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L A+V+ PTR+LA Q+ F
Sbjct: 130 LFAVVMAPTRELA---------------------------------------AQIAQTFE 150
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L + VG + + L K+P ++VATPGR
Sbjct: 151 ALGSLINLRCAVIVGGLDMVQQAIALGKKPH---------------------VVVATPGR 189
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 190 LLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKILK---------------FIPR 234
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
ER + SAT++ L + L P ++ Y+
Sbjct: 235 -------------ERH----------TYLFSATMSSKVESLQRASLKDPARVSVQSNGYQ 271
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L L LK +Y V L+ S + IVF +V T RL LL G + +
Sbjct: 272 VVSTLLQNFLFIPHALKDVYCVHLINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALPL 331
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 332 H---GQLSQSARLGALNKFRAGSRDILVATDVAARGLDIPNVDVVINYDLPQDSKTYIHR 388
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ GR +L+
Sbjct: 389 VGRTARAGKSGRALSLV 405
>gi|384252067|gb|EIE25544.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 415
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 193/430 (44%), Gaps = 104/430 (24%)
Query: 60 QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 119
QE P L D+ + TGSGKT ++A+PI+Q L + + ALV+ PTR+LALQ
Sbjct: 41 QEQAVPHLLA-DVIGLAQTGSGKTGAFAMPILQELLDTP-QANFALVLSPTRELALQ--- 95
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
IAE F A+ +G+ + VG
Sbjct: 96 ------------------IAEQ------------------FEALGAGIGVRCAVLVGGID 119
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
+ + L KRP I+V TPGR++DH++ T+GFTL+ L +
Sbjct: 120 MMAQAIALGKRPH---------------------IIVGTPGRVVDHLSNTKGFTLKALRH 158
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LV+DE DRLL ++ + +L++
Sbjct: 159 LVLDEADRLLNMDFEQEIDQILKVI----------------------------------- 183
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP 359
P R ++ SAT+T KL + L +P+ + + +Y+ + L L +K K
Sbjct: 184 --PRERRTQL-FSATMTTKVAKLQRACLQNPVKVEV-DAKYRTVDTLRQQYLFIPAKHKD 239
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
YL L L +VFT + ++T +L +L + G + I G Q R L
Sbjct: 240 CYLAYFLTELAGATFMVFTRTCDNTRKLALMLRNLGFDALPIH---GQMSQPKRLGALNK 296
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F+ G+ +L ++D +RG+D+ V+ VVNYD P K Y+HR GRTARAG+ GR TL+
Sbjct: 297 FKAGERSILAATDVASRGLDIPAVDVVVNYDVPINSKDYVHRVGRTARAGRSGRSLTLVT 356
Query: 480 KDEVKRFKKL 489
+ +V++F+K+
Sbjct: 357 QYDVEQFQKI 366
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 91 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 149
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 150 G---------------------------------------EQFEALGSGIGIKCCVVVGG 170
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 171 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 209
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 210 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 242
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 243 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 290
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 291 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 347
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 348 NKFKTKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 407
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 408 VSQYDIELYQRI 419
>gi|119185891|ref|XP_001243552.1| hypothetical protein CIMG_02993 [Coccidioides immitis RS]
gi|392870252|gb|EAS32044.2| ATP-dependent RNA helicase dbp6 [Coccidioides immitis RS]
Length = 809
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLP----CLDPRLKVALQNMGISSLFPVQV 56
E +++ S LP W+ PV VS P HLP L P+ LQ+ G S PVQ
Sbjct: 220 EHSQQPSYATLPEWLAHPVVVS-----PDTHLPFTELGLHPKQISTLQSQGYSKAMPVQS 274
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
AV + D+C+++ TGSGKTLSY LP++ T+ V LR L+++PTR+L Q
Sbjct: 275 AVLPLALK-SEHRGDICVSAATGSGKTLSYVLPLISTIEPSPVSQLRGLIIVPTRELVKQ 333
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
+ C+ C GL ++ ++ + + QV + F A G + G
Sbjct: 334 ARNT-CELCAAGT-GLRIGTAVGSTALKDEQSALMGQEQVYN-FQAWK---GKFSSVMTG 387
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
++ E + K G + + +DILV+TPGRL+DHI +T+GFTL+H
Sbjct: 388 SDWTNFDLQEYVAEAKECRGAL---PNHFAKTSPNIDILVSTPGRLVDHIRSTKGFTLKH 444
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL---KTIRRCG 293
L +LV+DE D+LL E++Q W TVLQ E++ +D + +P SL +TIR
Sbjct: 445 LKWLVIDEADKLLNESFQEWSQTVLQAV----ESKGNDDAHPVPKDLCSLPKEQTIR--- 497
Query: 294 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-----------------LFLTTG 336
K++LSAT+T+D KL L L +P L
Sbjct: 498 --------------KIILSATMTRDITKLNSLRLINPKLVEVRALDNSKGMLPSLLTRPP 543
Query: 337 ETR---YKLPERL-ESYKLICESKLKPLYLVALLQS 368
TR Y+LP L E + + KPLYL+ L+ S
Sbjct: 544 NTRFEGYQLPPTLNEMFVPAGDGSDKPLYLLELMAS 579
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R+GKI V+V++D +RG+D+ +++V++YD P + +YIHR GRTAR
Sbjct: 675 NKSSTARKTLAAYRQGKIPVVVATDRASRGLDLPALDHVISYDVPTSVTSYIHRVGRTAR 734
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKA 493
AG+ G +TL+ +E + F + K
Sbjct: 735 AGRRGVAWTLVAHNEGRWFSNEIVKG 760
>gi|395752428|ref|XP_003779421.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 2
[Pongo abelii]
Length = 796
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 215/485 (44%), Gaps = 90/485 (18%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 197 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 251
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 252 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 284
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 285 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 311
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS-DNENRFS 273
L+ATPGRL+DH++ F L + L++DE D PT+ L S
Sbjct: 312 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADSPPVGTACPHAPTLWLLHLPFPQPGAIS 371
Query: 274 DASTFLPSAFGSL--KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
L F + IR C R M+ SAT+T + LA + L +P+
Sbjct: 372 CPFRMLDEYFEEQMKEIIRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPV 421
Query: 332 FLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
+ P + + I ++ + + ALL + ++FT + + HR+
Sbjct: 422 RIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHI 481
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
LL G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+
Sbjct: 482 LLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINF 538
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSL 507
P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +
Sbjct: 539 TMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDV 595
Query: 508 IESLR 512
I R
Sbjct: 596 ILKFR 600
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 87 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 145
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 146 G---------------------------------------EQFEALGSGIGIKCCVVVGG 166
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 167 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 205
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 206 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 238
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 239 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 286
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 287 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 343
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 344 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 403
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 404 VSQYDIELYQRI 415
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 184/437 (42%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q +++I L RD+ + TGSGKT ++ALP++Q L +
Sbjct: 75 ATEALGYKHPTPIQ----EKSIPLALEGRDVIGLAETGSGKTAAFALPVLQALLEKP-SG 129
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L A+V+ PTR+LA Q+ F
Sbjct: 130 LFAVVMAPTRELA---------------------------------------AQIAQTFE 150
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L + VG + + L K+P ++VATPGR
Sbjct: 151 ALGSLINLRCAVIVGGLDMVQQAIALGKKPH---------------------VVVATPGR 189
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + + +L+ F+P
Sbjct: 190 LLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKILK---------------FIPR 234
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
ER + SAT++ L + L P ++ Y+
Sbjct: 235 -------------ERH----------TYLFSATMSSKVESLQRASLKDPARVSVQSNGYQ 271
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L L LK +Y V L+ S + IVF +V T RL LL G + +
Sbjct: 272 VVSTLLQNYLFIPHALKDVYCVHLINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALPL 331
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G +LV++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 332 H---GQLSQSARLGALNKFRAGSRDILVATDVAARGLDIPNVDVVINYDLPQDSKTYIHR 388
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ GR +L+
Sbjct: 389 VGRTARAGKSGRALSLV 405
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 213/477 (44%), Gaps = 118/477 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
++ +G ++ P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R
Sbjct: 197 SITTLGFTTPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGK 252
Query: 98 ---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A RCL ++ PTR+LA+Q C + +A H+
Sbjct: 253 KAAATRCL---ILAPTRELAVQ---------CYEVGSKLAAHT----------------- 283
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ L VG S+ + + L RP D+
Sbjct: 284 -------------DIRFALVVGGLSVKAQETNLRTRP---------------------DV 309
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH+ + FTL+ L LV+DE DR+L E+ FSD
Sbjct: 310 VIATPGRLIDHLRNSPTFTLDALDILVLDEADRML-------------------EDGFSD 350
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T + I C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 351 ELTEI---------ITSC---------PTSRQT-MLFSATMTDSVDELVRMSLNKPVRLF 391
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
R L+ + + K + LVAL + + + I+F S + H++ + +
Sbjct: 392 VDPKRSTARGLLQEFVRVRAGKETERSALLVALCKRSFKARAIIFYRSKKLAHQMRIMFS 451
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +K E G Q R K L+ FR+G + L+++D +RG+D++G+ V+NYD P
Sbjct: 452 LLG---MKCDELHGDLTQEQRLKALQQFRDGHVDYLMATDLASRGLDIKGIETVINYDMP 508
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH-SIPSSLI 508
+ Y+HR GRTARAG+ GR TL+ + + K K ++ + ++ H +P+ ++
Sbjct: 509 GTLSQYLHRVGRTARAGKKGRSVTLVGEADRKLLKAAIKHSSSEDQVRHRQVPTEVL 565
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 196/441 (44%), Gaps = 109/441 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 184 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 239
Query: 102 L--RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R L++ PTR+LA+Q+ HS+ + QF
Sbjct: 240 FATRVLILTPTRELAVQI------------------HSMIQKLAQF-------------- 267
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ GL VG G+ ++V+ L+S DI+VATP
Sbjct: 268 -------TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATP 299
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 300 GRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL---------------- 343
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
C R M+ SAT+T++ +L +L L+ PL L+ +
Sbjct: 344 ------------CPKRRQ----------TMLFSATMTEEVKELVKLSLNKPLRLSADPSA 381
Query: 340 YKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ P E I ++ + L++L + K I+F+ + ++ HRL L FG
Sbjct: 382 RRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLA 438
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +
Sbjct: 439 GLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDS 498
Query: 458 YIHRAGRTARAGQLGRCFTLL 478
Y+HR GRTARAG+ G T +
Sbjct: 499 YVHRVGRTARAGREGYAVTFV 519
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 194/444 (43%), Gaps = 107/444 (24%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
MG + P+Q A E L ERD+ + TGSGKT ++ALPI+Q+L + A + +L
Sbjct: 36 MGWRAPTPIQCAAVPE----ALRERDVIGLAQTGSGKTGAFALPILQSLLD-APQGFHSL 90
Query: 106 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 165
++ PTR+LA+Q IAE Q ++L
Sbjct: 91 ILSPTRELAMQ---------------------IAE---QIETL---------------GA 111
Query: 166 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 225
VG VG + + +L KRP ++V TPGR++DH
Sbjct: 112 GVGARTATLVGGVDMTTQAIKLGKRPH---------------------VIVGTPGRVVDH 150
Query: 226 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 285
+ T+GF+L L LV+DE DRLL ++ + +L++ SD +
Sbjct: 151 LENTKGFSLRALKVLVLDEADRLLNLDFEEEIDKILRVIPSDRRTQL------------- 197
Query: 286 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 345
SAT+T KL + L P+ + +Y E
Sbjct: 198 -------------------------FSATMTNKVAKLQRACLRDPVKVEV-SAKYSTVES 231
Query: 346 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 405
L+ + L +K K Y L L IVF + ++T +L + + G + I
Sbjct: 232 LKQHYLFIPAKHKDCYATYLFNELSASTLIVFARTCDATRKLALIARNLGFGAVPI---H 288
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
G Q R L+ F+ G+ +L+++D +RG+D+ V+ V+NYD P K Y+HR GRT
Sbjct: 289 GQMSQPKRIAALQKFKSGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRT 348
Query: 466 ARAGQLGRCFTLLHKDEVKRFKKL 489
ARAG+ G T++ + +V+ ++K+
Sbjct: 349 ARAGRSGLAVTMVTQYDVELYQKI 372
>gi|295664398|ref|XP_002792751.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278865|gb|EEH34431.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 835
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 205/440 (46%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G ++ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 327 GLTSVGFTTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 382
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 383 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 418
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 419 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 442
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 443 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 487
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 488 PKSRQT-----------------------MLFSATMTNTIDKLIRVGLNRPVRLMVNAQK 524
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YLV L +++ +++ I+F + + HR+ + FG
Sbjct: 525 QTVGTLVQEFVRLRPGREDKRLGYLVTLCKTVYKDRVIIFFRAKKEAHRVRIIFGLFG-- 582
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K++++FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 583 -LKAAELHGSMSQEQRIKSVESFRDGKVSFLLATDLASRGLDIKGVETVINYEAPQSHEI 641
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR T+
Sbjct: 642 YLHRVGRTARAGRSGRACTI 661
>gi|195581486|ref|XP_002080565.1| GD10546 [Drosophila simulans]
gi|194192574|gb|EDX06150.1| GD10546 [Drosophila simulans]
Length = 782
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 210/479 (43%), Gaps = 117/479 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A+ +G + P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N
Sbjct: 171 AIGVLGYTYPTPIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNN 226
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+A+ R LV++PTR+L QV + + + QF S+
Sbjct: 227 KAI--TRVLVLVPTRELGAQV------------------YQVTKQLCQFTSI-------- 258
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
VGLA+G + + + L + P DI++
Sbjct: 259 -------------DVGLAIGGLDVKAQEAVLRQNP---------------------DIVI 284
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DHI T FTL+ + L++DE DR+L E + + +
Sbjct: 285 ATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI---------------- 328
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLT 334
I C R M+ SAT+++ LA + L P+ F+
Sbjct: 329 ------------INSCCKTR----------QTMLFSATMSEQVKDLAAVSLDKPIKVFVN 366
Query: 335 TGE-TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
+ + L + + E +P+ L +L+ + C+VF + + HRL LL
Sbjct: 367 NNQQVAFNLRQEFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGL 425
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G ++ E G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P
Sbjct: 426 LG---VRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPI 482
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
+ YIHR GRTARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 483 TTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|302792278|ref|XP_002977905.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
gi|300154608|gb|EFJ21243.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
Length = 741
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 200/438 (45%), Gaps = 111/438 (25%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLR 103
+G P+Q A I L RD+C ++ TGSGKT ++ALPI++ L R R +R
Sbjct: 133 LGYRQPTPIQAAC----IPLALAGRDICGSAVTGSGKTAAFALPILERLLFRPRRIPAIR 188
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
L++ PTR+LA+Q+ HS+ E QF +
Sbjct: 189 VLIITPTRELAVQL------------------HSMIEKLAQFTDIRCC------------ 218
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
L VG G SS E++ L++ DI+VATPGR++
Sbjct: 219 -----LVVG---GLSSKVQEVA----------------------LRTHPDIVVATPGRMI 248
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ T+ LE L LV+DE DRLL ++ + +++L PS
Sbjct: 249 DHLRNTQSVGLEELAILVLDEADRLLELGFREEIHELVKL---------------CPS-- 291
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT---TGETRY 340
R M+ SAT+T + ++L +L L P+ L+ + E
Sbjct: 292 ---------------------RRQTMLFSATMTDEVSELIKLSLKSPVRLSADPSTERPS 330
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
L E + + E + + L +SL + K I+F+ + HRL L FG +K
Sbjct: 331 TLTEEVIRIRAGHEEDKEAIVLSLCSRSL-KSKTIIFSGTKVEAHRLKIL---FGLSGLK 386
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E G Q+ R + L+AFR+ ++ L+++D RG+D+ GV +V+N + P IKTY+H
Sbjct: 387 SAELHGNLTQAQRLEALEAFRKQEVDFLIATDVAARGLDIIGVESVINLECPKEIKTYVH 446
Query: 461 RAGRTARAGQLGRCFTLL 478
R GRTARAG+ GR TL+
Sbjct: 447 RVGRTARAGRHGRSVTLM 464
>gi|168010159|ref|XP_001757772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691048|gb|EDQ77412.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 753
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 213/471 (45%), Gaps = 111/471 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT ++ALP+++ L R R
Sbjct: 142 ACETLGYREPTPIQAAC----IPLALTGRDICGSAVTGSGKTGAFALPMLERLLYRPRRI 197
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA+QV HS+ + QF DV
Sbjct: 198 PAIRCLILTPTRELAVQV------------------HSMVQKLAQF-----------TDV 228
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+AI VG G SS E++ L RP DI+VATP
Sbjct: 229 TSAIV------VG---GLSSKVQEVA-LRARP---------------------DIVVATP 257
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L LV+DE DRLL L T+ +E
Sbjct: 258 GRMLDHLQNSLSVGLEDLSILVLDEADRLLE----------LGFTQEVHE---------- 297
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+R+C P R M+ SAT+T++ + L L L+ P+ L+ +
Sbjct: 298 --------LVRQC---------PKRRQT-MLFSATMTEEVSNLINLSLNSPVRLSADPST 339
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + E+ K L+AL +EK I+F+ HRL L FG
Sbjct: 340 KRPVSLSEEVVKIRPALEND-KEAVLLALCTRTFKEKVIIFSGMKVEAHRLKIL---FGL 395
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q++R L++FR+ ++ L+++D RG+D+ GV V+N+ P+ I
Sbjct: 396 AGLKAAELHGNLTQAMRLDALESFRKQEVDFLIATDVAARGLDIVGVETVINFHCPSDIT 455
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 507
Y+HR GRTARAG+ G T + + E K + +KA + P+S+
Sbjct: 456 VYVHRVGRTARAGRKGCAVTFVTERERSLLKAIAKKAGSQLQNRQVAPTSI 506
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 196/441 (44%), Gaps = 109/441 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 181 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 236
Query: 102 L--RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R L++ PTR+LA+Q+ HS+ + QF
Sbjct: 237 FATRVLILTPTRELAVQI------------------HSMIQNLAQF-------------- 264
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ GL VG G+ ++V+ L+S DI+VATP
Sbjct: 265 -------TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATP 296
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 297 GRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL---------------- 340
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
C R M+ SAT+T++ +L +L L+ PL L+ +
Sbjct: 341 ------------CPKRRQ----------TMLFSATMTEEVKELVKLSLNKPLRLSADPSA 378
Query: 340 YKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ P E I ++ + L++L + K I+F+ + ++ HRL L FG
Sbjct: 379 RRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLA 435
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +
Sbjct: 436 GLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDS 495
Query: 458 YIHRAGRTARAGQLGRCFTLL 478
Y+HR GRTARAG+ G T +
Sbjct: 496 YVHRVGRTARAGREGYAVTFV 516
>gi|195332387|ref|XP_002032880.1| GM21012 [Drosophila sechellia]
gi|194124850|gb|EDW46893.1| GM21012 [Drosophila sechellia]
Length = 782
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 210/479 (43%), Gaps = 117/479 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A+ +G + P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N
Sbjct: 171 AIGVLGYTYPTPIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNN 226
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+A+ R LV++PTR+L QV + + + QF S+
Sbjct: 227 KAI--TRVLVLVPTRELGAQV------------------YQVTKQLCQFTSI-------- 258
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
VGLA+G + + + L + P DI++
Sbjct: 259 -------------DVGLAIGGLDVKAQEAVLRQNP---------------------DIVI 284
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DHI T FTL+ + L++DE DR+L E + + +
Sbjct: 285 ATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI---------------- 328
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLT 334
I C R M+ SAT+++ LA + L P+ F+
Sbjct: 329 ------------INSCCKTR----------QTMLFSATMSEQVKDLAAVSLDKPIKVFVN 366
Query: 335 TGE-TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
+ + L + + E +P+ L +L+ + C+VF + + HRL LL
Sbjct: 367 NNQQVAFNLRQEFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGL 425
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G ++ E G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P
Sbjct: 426 LG---VRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPI 482
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
+ YIHR GRTARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 483 TTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 188/434 (43%), Gaps = 102/434 (23%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
A+ + I L RD+ + TGSGKT ++ALPI+Q L + + L LV+ PTR+LA
Sbjct: 82 TAIQAKAIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP-QPLFGLVLAPTRELAA 140
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ + F A+ + L + V
Sbjct: 141 QIGQS---------------------------------------FEALGALISLRCAVIV 161
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + + L K+P I+VATPGRL+DH+ T+GF+L
Sbjct: 162 GGLDMVPQAIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLR 200
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 201 SLKYLVMDEADRLLDMDFGPSIDKILK---------------FIPRE-------RRT--- 235
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
+ SATL+ L + L P+ ++ ++Y+ L + ++
Sbjct: 236 -------------YLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYILVPH 282
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YL+ L+ + I+FT +V T R+ LL G I + G QS R
Sbjct: 283 KRKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPLH---GQLSQSSRLG 339
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L F+ G ++LV++D RG+D+ V+ V+N D P KTYIHR GRTARAG+ G
Sbjct: 340 ALNKFKGGSREILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGRTARAGKSGIAI 399
Query: 476 TLLHKDEVKRFKKL 489
++ + +V+ ++++
Sbjct: 400 NIVTQYDVEIYQRI 413
>gi|5901872|gb|AAD55444.1|AF181659_1 BcDNA.GM05306 [Drosophila melanogaster]
Length = 641
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 204/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + C QF ++
Sbjct: 236 VPTRELGAQVYQVTKQLC------------------QFTTI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQ----------TMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 191/444 (43%), Gaps = 105/444 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ + LV+ PTR
Sbjct: 72 YKAPTAIQTEAIPLALQNRDLIGLAETGSGKTAAFALPILQALMDKP-QPFFGLVLAPTR 130
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ A F A+ + +
Sbjct: 131 ELAYQISEA---------------------------------------FEALGSTISVRS 151
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + + KRP I+VATPGRL+DH+ T+G
Sbjct: 152 VVLVGGMDMVPQAIAIGKRPH---------------------IIVATPGRLLDHLENTKG 190
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L YLV+DE DRLL + + +L++ LP RR
Sbjct: 191 FSLRSLKYLVMDEADRLLDMDFGPIIDKILKV---------------LPRE-------RR 228
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L +PL ++ +Y+ L Y L
Sbjct: 229 T----------------FLFSATMSSKVEGLQRASLSNPLRVSVSSNKYQTVSTLLQYYL 272
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K ++L+ LL + I+FT +V T RL L G I + G QS
Sbjct: 273 FIPHKHKDVHLIWLLNEHVGQSVIIFTRTVHETMRLTILARALGFGAIALH---GQLSQS 329
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L FR +L+++D RG+D+ V+ V+NYD A KT++HR GRTARAG+
Sbjct: 330 ARLGALGKFRSRSRDILIATDVAARGLDIPSVDLVLNYDLAADSKTHVHRIGRTARAGKS 389
Query: 472 GRCFTLLHKDEVK---RFKKLLQK 492
G+ +L+ + +V+ R +K L +
Sbjct: 390 GKAISLVTQYDVEVWLRIEKALDR 413
>gi|227206264|dbj|BAH57187.1| AT4G16630 [Arabidopsis thaliana]
Length = 617
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 196/441 (44%), Gaps = 109/441 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 119 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 174
Query: 102 L--RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R L++ PTR+LA+Q+ HS+ + QF
Sbjct: 175 FATRVLILTPTRELAVQI------------------HSMIQNLAQF-------------- 202
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ GL VG G+ ++V+ L+S DI+VATP
Sbjct: 203 -------TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATP 234
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 235 GRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL---------------- 278
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
C R M+ SAT+T++ +L +L L+ PL L+ +
Sbjct: 279 ------------CPKRRQ----------TMLFSATMTEEVKELVKLSLNKPLRLSADPSA 316
Query: 340 YKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ P E I ++ + L++L + K I+F+ + ++ HRL L FG
Sbjct: 317 RRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLA 373
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +
Sbjct: 374 GLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDS 433
Query: 458 YIHRAGRTARAGQLGRCFTLL 478
Y+HR GRTARAG+ G T +
Sbjct: 434 YVHRVGRTARAGREGYAVTFV 454
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 197/441 (44%), Gaps = 109/441 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G P+Q A I L RDLC ++ TGSGKT ++ALP ++ L R R
Sbjct: 181 ACETLGYKKPTPIQAAC----IPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV 236
Query: 102 L--RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R L++ PTR+LA+Q+ HS+ + QF
Sbjct: 237 FATRVLILTPTRELAVQI------------------HSMIQNLAQF-------------- 264
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ GL VG G+ ++V+ L+S DI+VATP
Sbjct: 265 -------TDIKCGLIVG-------------------GLSVREQEVV--LRSMPDIVVATP 296
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + L+ L L++DE DRLL+ + + +++L
Sbjct: 297 GRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRL---------------- 340
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
C P R M+ SAT+T++ +L +L L+ PL L+ +
Sbjct: 341 ------------C---------PKRRQT-MLFSATMTEEVKELVKLSLNKPLRLSADPSA 378
Query: 340 YKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ P E I ++ + L++L + K I+F+ + ++ HRL L FG
Sbjct: 379 RRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLA 435
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q+ R +L+ FR+ ++ L+++D RG+D+ GV V+NY P I +
Sbjct: 436 GLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDS 495
Query: 458 YIHRAGRTARAGQLGRCFTLL 478
Y+HR GRTARAG+ G T +
Sbjct: 496 YVHRVGRTARAGREGYAVTFV 516
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 94 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 152
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 153 G---------------------------------------EQFEALGSGIGIKCCVVVGG 173
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 174 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 212
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 213 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 245
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 246 -----------FLFSATMTKKVKKLQRASLKDPVKVEV-SNKYQTVEQLQQSYLFIPVKY 293
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 294 KDVYLVHILNDLAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 350
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 351 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 410
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 411 VTQYDIELYQRI 422
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 87 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYF-ALVLTPTRELAFQI 145
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 146 G---------------------------------------EQFEALGSGIGIKCCVVVGG 166
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 167 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 205
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 206 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 238
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 239 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 286
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 287 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 343
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 344 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITL 403
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 404 VSQYDIELYQRI 415
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESPQRYF-ALVLTPTRELAFQI 153
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 154 G---------------------------------------EQFEALGSGIGIKCCVVVGG 174
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 175 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 213
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 246
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 247 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 294
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 295 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 351
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 352 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITI 411
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 412 VSQYDIELYQRI 423
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+ L R ALV+ PTR+LA Q+
Sbjct: 95 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESPQRYF-ALVLTPTRELAFQI 153
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ F A+ +G+ + VG
Sbjct: 154 G---------------------------------------EQFEALGSGIGIKCCVVVGG 174
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P I++ATPGRL+DH+ +GF L+ +
Sbjct: 175 MDMVAQGLQLAKKPH---------------------IIIATPGRLVDHLENMKGFNLKAI 213
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ L +L++ LP RR
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKV---------------LPRE-------RRT----- 246
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T+ KL + L P+ + +Y+ E+L+ L K
Sbjct: 247 -----------FLFSATMTKKVKKLQRASLKDPVKVEVS-NKYQTVEQLQQSYLFIPVKY 294
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV +L L ++F S+ +T + +L G I + G Q+ R L
Sbjct: 295 KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPL---HGQMSQNKRLAAL 351
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+S+D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G+ T+
Sbjct: 352 NKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITI 411
Query: 478 LHKDEVKRFKKL 489
+ + +++ ++++
Sbjct: 412 VSQYDIELYQRI 423
>gi|395334307|gb|EJF66683.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 211/478 (44%), Gaps = 119/478 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
+L +G ++ P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R
Sbjct: 201 SLTTLGFTTPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGK 256
Query: 98 ---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A RCL V++PTR+L +Q C + +A H+
Sbjct: 257 KAAATRCL---VLVPTRELGVQ---------CFEVGTKLAAHT----------------- 287
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ L VG SI + + L RP D+
Sbjct: 288 -------------DIRFALVVGGLSIKAQEANLRTRP---------------------DV 313
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DHI + FTL+ L LV+DE DR+L E+ F+D
Sbjct: 314 VIATPGRLIDHIRNSPTFTLDALDILVLDEADRML-------------------EDGFAD 354
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T + I+ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 355 ELTEI---------IKSC---------PTSRQT-MLFSATMTDSVDELVRMSLNKPVRLF 395
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
R L+ + + K + LVAL + + + I+F S + H++ +
Sbjct: 396 VDPKRATARGLLQEFVRVRAGKEAERSALLVALCKRTFKSRVIIFFRSKKLAHQMRIV-- 453
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
F L +K E G Q R K L+ FR+G + L+++D +RG+D++G+ V+NYD P
Sbjct: 454 -FRLLDMKCDELHGDLSQEQRLKALQQFRDGHVDYLMATDLASRGLDIKGIETVINYDMP 512
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN--DSCPIHSIPSSLI 508
+ Y+HR GRTARAG+ GR TL+ + + K K ++ + D +P ++
Sbjct: 513 GQLAQYLHRVGRTARAGKKGRSVTLVGEADRKMLKAAIKHSSGGEDQIRHRQVPQEVV 570
>gi|195474630|ref|XP_002089594.1| GE19181 [Drosophila yakuba]
gi|194175695|gb|EDW89306.1| GE19181 [Drosophila yakuba]
Length = 782
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|392597372|gb|EIW86694.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 750
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 204/465 (43%), Gaps = 123/465 (26%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---- 94
L+ AL +G + P+QVA I L +D+ N+ TGSGKT ++ +P+++ L
Sbjct: 189 LQKALTTLGFNKPTPIQVAA----IPVALIGKDIVGNAVTGSGKTAAFVIPMLERLLYRE 244
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
++ R L+++PTR+L +Q C + +A ++ A
Sbjct: 245 KGKSAAATRCLILVPTRELGVQ---------CYEVAQKLAAYTDAR-------------- 281
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ L VG S+ + + L RP D+
Sbjct: 282 ----------------IALVVGGLSLKSQEAALRTRP---------------------DV 304
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DHI+ + F L+ L LV+DE DR+L E + L +
Sbjct: 305 VIATPGRLVDHIHNSPSFNLDALDILVLDEADRMLSEGFADELSEI-------------- 350
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
I+ C P R M+ SAT+T ++L ++ L+ P+ L
Sbjct: 351 --------------IKAC---------PKSRQT-MLFSATMTDSVDELVKMSLNKPVRL- 385
Query: 335 TGETRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+ P R + L+ E + LVAL Q IVF S + H+
Sbjct: 386 -----FVDPRRTTARGLVQEFVRVRAEKETERSSLLVALCQRTFTSGVIVFFRSKKLAHQ 440
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
+ + F L +K +E G Q R + L+ FR+G++ L+++D +RG+D++G+ V
Sbjct: 441 MRII---FRMLDMKCEELHGDLTQEQRLQALQLFRDGQVNFLMATDLASRGLDIKGIETV 497
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
+NYD P Y+HR GRTARAG+ GR TL+ + + K K +++
Sbjct: 498 INYDMPNQAAQYLHRVGRTARAGKTGRSLTLVGEADRKMLKSVIK 542
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 213/486 (43%), Gaps = 113/486 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q ++I P L D+ + TGSGKT ++A+PI+ +L +
Sbjct: 93 PELIQACKNLNYSKPTPIQ----SKSIPPALKGHDIIGLAQTGSGKTAAFAIPILNSLWH 148
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A ++ PTR+LA Q+
Sbjct: 149 DQ-QPYYACILAPTRELA---------------------------------------QQI 168
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P +++
Sbjct: 169 KETFDSLGSLMGVRSVCIVGGMNMMDQARDLMRKPH---------------------VII 207
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L YLV+DE DRLL + L +L++ + +
Sbjct: 208 ATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDMEFGPVLDRILKILPTQGR------T 261
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
T+L SAT+T +KL + L +P+
Sbjct: 262 TYL-------------------------------FSATMTSKIDKLQRASLTNPVKCAVS 290
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK +L+ LL + I+FT + + R+ L N
Sbjct: 291 -NKYQTVDTLVQTLIVVPGGLKNTFLIYLLNEYIGKSTIIFTRTKANAERISGLCNL--- 346
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R+ L F+ G+ +LV++D RG+D+ V+ V+NYD P K
Sbjct: 347 LEFNATALHGDLNQNQRTGALDLFKAGRKTILVATDVAARGLDIPSVDIVINYDIPVDSK 406
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLRP 513
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P ++ +I +LR
Sbjct: 407 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKETVDKEMILTLRD 462
Query: 514 VYKSGD 519
D
Sbjct: 463 SVDKAD 468
>gi|194757571|ref|XP_001961038.1| GF13667 [Drosophila ananassae]
gi|190622336|gb|EDV37860.1| GF13667 [Drosophila ananassae]
Length = 782
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 189/434 (43%), Gaps = 102/434 (23%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
++ ++I L RD+ + TGSGKT ++ALPI+Q L + + L LV+ PTR+LA
Sbjct: 80 TSIQAKSIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP-QPLFGLVLAPTRELAA 138
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ + F A+ + L + V
Sbjct: 139 QIGQS---------------------------------------FEALGALISLRCAVIV 159
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + + L K+P I+VATPGRL+DH+ T+GF+L
Sbjct: 160 GGLDMVPQAIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLR 198
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L YLV+DE DRLL + + +L+ F+P RR
Sbjct: 199 SLKYLVMDEADRLLDMDFGPSIDKILK---------------FIPRE-------RRT--- 233
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
+ SATL+ L + L P+ ++ ++Y+ L + +
Sbjct: 234 -------------YLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYIFVPH 280
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YL+ L+ + I+FT +V T R+ LL G I + G QS R
Sbjct: 281 KRKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPLH---GQLSQSSRLG 337
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L F+ G ++LV++D RG+D+ V+ V+N D P KTYIHR GRTARAG+ G
Sbjct: 338 ALNKFKGGSREILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGRTARAGKSGIAI 397
Query: 476 TLLHKDEVKRFKKL 489
+++ + +V+ ++++
Sbjct: 398 SIVTQYDVEIYQRI 411
>gi|312375048|gb|EFR22493.1| hypothetical protein AND_15188 [Anopheles darlingi]
Length = 879
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 212/468 (45%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 109
P+Q + TI L RD+C + TG+GKT +Y LP ++ L N A R LV++P
Sbjct: 233 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYKPNAAQAVTRVLVLVP 288
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+L QV + +A+ QF +
Sbjct: 289 TRELGAQV------------------YQVAKQLTQF---------------------TNV 309
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
VG+A+G G+ ++ + L++ DI++ATPGRL+DHI T
Sbjct: 310 EVGIAIG-------------------GLDVKAQEAV--LRTNPDIVIATPGRLIDHIKNT 348
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F+L+ + L++DE DR+L E + + + I
Sbjct: 349 PSFSLDSIEILILDEADRMLDEYFAEQMKEI----------------------------I 380
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGET-RYKLPERL 346
R C R M+ SAT+T++ LA + L P +F+ +T + L +
Sbjct: 381 RSCSATRQT----------MLFSATMTEEVKDLAAVSLKKPVKIFVNNNQTVAFNLRQEF 430
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ E+ +P+ L AL+ + C+VF + + HRL LL L +K E G
Sbjct: 431 IRVREGREADREPI-LAALVCRTFHDHCMVFVQTKRTAHRLRILLGL---LGVKAGELHG 486
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
Q+ R ++LK F++ +I VLV++D RG+D+ GV V+N+ PA ++ YIHR GRTA
Sbjct: 487 DLTQAQRLESLKQFKDEQIDVLVATDVAARGLDISGVTTVINFVMPATLEHYIHRVGRTA 546
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
RAG+ G +L + E + K +++ A N P+ + IP +I+ R
Sbjct: 547 RAGRAGVSVSLAGELERRIVKDIVKNAVN---PVKNRIIPGEIIDKYR 591
>gi|321262460|ref|XP_003195949.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317462423|gb|ADV24162.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 484
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 199/455 (43%), Gaps = 107/455 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+ P L A +MG +Q E I L +D+ + TGSGKT +++LPI+QTL
Sbjct: 45 ISPELCRACASMGFKKPSDIQA----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTL 100
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ ALV+ PTR+LA Q++ Q SL
Sbjct: 101 WENP-QPFFALVLAPTRELAYQISQ------------------------QITSL------ 129
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+G+ + VG + + L KRP +
Sbjct: 130 ---------GSGIGVRTAVLVGGMDMMSQSIALSKRPH---------------------V 159
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL + + VL++ +
Sbjct: 160 IVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKVLKVIPKER------ 213
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + L+ P+ +
Sbjct: 214 -NTYL-------------------------------FSATMTTKVAKLQRASLNKPVRVE 241
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
++Y L + L+ K K YL+ L L I+FT +V + RL +L
Sbjct: 242 V-SSKYSTVSTLLQHYLLLPLKNKDSYLLYLANELSSSSMIIFTRTVADSQRLSIILRRL 300
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I + G QS+R +L F+ G +LV++D +RG+D+ V+ V+NYD P
Sbjct: 301 GFPAIPLH---GQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTN 357
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
K Y+HR GRTARAG+ G+ TL+ + +V+ +++
Sbjct: 358 SKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRI 392
>gi|326483004|gb|EGE07014.1| ATP-dependent RNA helicase dbp6 [Trichophyton equinum CBS 127.97]
Length = 812
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 172/348 (49%), Gaps = 51/348 (14%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKN----IFGLIADHSIAEMCVQFDSLLFISLPQ-V 156
LRAL+++PTR+L QV A C+ C I + ++ + Q + + P+
Sbjct: 296 LRALIIVPTRELVKQVRDA-CELCSSGSGLRIGTAVGSTALKDEQAQIMEQISVYRPEST 354
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ I A + V + A+E S+ + +E+ C VD+L+
Sbjct: 355 RSQNGTIMTADEWASFSLVDYIAEAEEYSKTLPDHCIESSPC-------------VDVLI 401
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGRL+DHI +T+GFTL L +LV+DE DRLL E++Q W+ TVL + +
Sbjct: 402 CTPGRLVDHIRSTKGFTLGSLEWLVIDEADRLLNESFQEWVETVLPALETKEK------- 454
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPR-LVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
P+A GSL+ + + F R L K++LSAT+T+D KL L LH+P L +
Sbjct: 455 ---PAATGSLEELIKA-----FSHPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVV 506
Query: 335 TGETRYK-------------LPERL-ESYKLICESKLKPLYLVALLQS 368
G R + LP L ES + + KPLYL+ LLQS
Sbjct: 507 DGAERDEAEAGEAEPDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 374 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|291409987|ref|XP_002721272.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Oryctolagus
cuniculus]
Length = 789
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 225/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 206 SQYDESLSFQDMNLSR-----PLLK-AISAMGFKQPTPIQKAC----IPVGLLGKDICAC 255
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 256 AATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQV---------------- 299
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF S+ + LAVG + +
Sbjct: 300 --HSVTKQLAQFCSI---------------------TTCLAVGGLDVKSQ---------- 326
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
EA L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 327 EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLNSIEVLILDEADRMLDEYF 375
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + + IR C R M+ SA
Sbjct: 376 EEQMKEI----------------------------IRMCSHHR----------QTMLFSA 397
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 398 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFT 457
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HRL LL L +++ E G Q+ R + L+ F++ +I VLV++
Sbjct: 458 DHVMLFTQTKKQAHRLHILLGL---LGLQVGELHGNLSQTQRLEALRRFKDEQIDVLVAT 514
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV VVN+ P IK Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 515 DVAARGLDIEGVKTVVNFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 574
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + +P +I R
Sbjct: 575 AA---KAPVKARILPQDVILRFR 594
>gi|195024659|ref|XP_001985916.1| GH21077 [Drosophila grimshawi]
gi|193901916|gb|EDW00783.1| GH21077 [Drosophila grimshawi]
Length = 790
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP V+ L +N+A+ R LV+
Sbjct: 183 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTVERLLYRPLNNKAI--TRVLVL 236
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 237 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 259
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 260 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 296
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T F+L+ + L++DE DR+L E + + +
Sbjct: 297 NTPSFSLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 329
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 330 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 378
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 379 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 434
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 435 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 494
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ S IP +I+ R
Sbjct: 495 TARAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIDKYR 541
>gi|66812836|ref|XP_640597.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
gi|74897154|sp|Q54TJ4.1|DDX27_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx27; AltName:
Full=DEAD box protein 27
gi|60468614|gb|EAL66617.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
Length = 783
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 213/482 (44%), Gaps = 122/482 (25%)
Query: 25 EDCP-LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
E+ P + L P LK A+Q +G S P+Q + I L +D+ ++ TGSGKT
Sbjct: 187 EELPTFEELHLSRPLLK-AVQKLGFSQPTPIQA----KAIPLALNGKDILASASTGSGKT 241
Query: 84 LSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
++ LP+++ L + R +R L++LPTR+LALQ C+++ +A S
Sbjct: 242 AAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQ---------CQSVMENLAQFSNITS 292
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 201
C L VG G S+ A E+
Sbjct: 293 C--------------------------LIVG---GLSNKAQEV----------------- 306
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
EL+ + D+++ATPGRL+DH+ G L+ L L++DE DRLL ++ +
Sbjct: 307 -----ELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEIN--- 358
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
K + C R M+ SATL +
Sbjct: 359 -------------------------KIVESCPTNRQT----------MLFSATLNDEVKT 383
Query: 322 LAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLV---ALLQSL-----GEEK 373
LA+L L P+ + + ++ LE + K+KP +L A+L SL +
Sbjct: 384 LAKLSLQQPIRVQV-DALMQVTSTLEQEFV----KIKPQHLSDRPAILLSLCTRVFNQGG 438
Query: 374 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
I+F S + HRL + FG +K E G Q R +L+ FR+G++ L++SD
Sbjct: 439 TIIFCRSKKEVHRLRII---FGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDV 495
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
+RG+D+ GV V+NY+ P + YIHR GRTARAG G+ + + ++ K K ++ KA
Sbjct: 496 ASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIVTKA 555
Query: 494 DN 495
N
Sbjct: 556 RN 557
>gi|209877961|ref|XP_002140422.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556028|gb|EEA06073.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 442
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 203/463 (43%), Gaps = 111/463 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L D+ + TGSGKT ++ LPI+Q+L R + ++V+ PTR
Sbjct: 55 IQREAIPIALRGGDIIGLAETGSGKTGAFILPILQSLLENQSR-MYSVVLAPTR------ 107
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
E+CVQ + + F+A+ + L V VG
Sbjct: 108 ----------------------ELCVQ-----------ISEQFSALGSLISLQVANIVGG 134
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ ++ L K+P I+VA+PGRL+DH+ T+GF + +
Sbjct: 135 MDMVNQALSLAKKPH---------------------IIVASPGRLVDHLENTKGFNISSV 173
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DRLL ++ L K I C R
Sbjct: 174 KYLVMDEADRLLSMDFEIALT----------------------------KIIEACPKNRN 205
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T KL ++ L +P+ + T+Y E L Y + K
Sbjct: 206 ----------TYLFSATMTTKVAKLQRVSLKNPVKICVN-TKYDTAENLLQYYMFIPFKF 254
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV L+Q+L + I+FT++ S R L+ G + + G Q+ R L
Sbjct: 255 KWSYLVILVQNLSQYTGIIFTNTCISCKRGALLMQQLGFSSVCLH---GRMNQTQRLAAL 311
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ + +L +++ +RG+D+ V+ V+N+D P K Y+HR GRTARAG+ G+ +L
Sbjct: 312 NQFKSKQRHLLFTTEVGSRGLDIPHVDFVINFDIPMSSKDYVHRVGRTARAGRSGKAISL 371
Query: 478 LHKDEVKRF--------KKLLQKADNDSCPIHSIPSSLIESLR 512
+ + +V+ F KKL + +D + + +I ++E+LR
Sbjct: 372 VTQYDVEMFQRVEFALNKKLDEYSDINKDQMMAIHGKVLEALR 414
>gi|326475893|gb|EGD99902.1| ATP-dependent RNA helicase DBP6 [Trichophyton tonsurans CBS 112818]
Length = 812
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 172/348 (49%), Gaps = 51/348 (14%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKN----IFGLIADHSIAEMCVQFDSLLFISLPQ-V 156
LRAL+++PTR+L QV A C+ C I + ++ + Q + + P+
Sbjct: 296 LRALIIVPTRELVKQVRDA-CELCSSGSGLRIGTAVGSTALKDEQAQIMEQISVYRPEST 354
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ I A + V + A+E S+ + +E+ C VD+L+
Sbjct: 355 RSQNGTIMTADEWASFSLVDYIAEAEEYSKTLPDHCIESSPC-------------VDVLI 401
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGRL+DHI +T+GFTL L +LV+DE DRLL E++Q W+ TVL + +
Sbjct: 402 CTPGRLVDHIRSTKGFTLGSLEWLVIDEADRLLNESFQEWVETVLPALETKEK------- 454
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPR-LVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
P+A GSL+ + + F R L K++LSAT+T+D KL L LH+P L +
Sbjct: 455 ---PAATGSLEELIKA-----FNHPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVV 506
Query: 335 TGETRYK-------------LPERL-ESYKLICESKLKPLYLVALLQS 368
G R + LP L ES + + KPLYL+ LLQS
Sbjct: 507 DGAERDEAEAGEAEPDSNIALPSLLNESSIPVGDGSEKPLYLLKLLQS 554
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 374 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 198/461 (42%), Gaps = 109/461 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 130 LVPELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL 185
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A ++ PTR+LA
Sbjct: 186 WHDQ-EPYYACILAPTRELA---------------------------------------Q 205
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 206 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------I 244
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 245 IIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII---------- 294
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
P + SAT+T +KL + L +P+
Sbjct: 295 ---------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCA 327
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 328 VS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL- 385
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R L F+ GK +LV++D RG+D+ V+ VVNYD P
Sbjct: 386 --LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVD 443
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQK 492
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K
Sbjct: 444 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK 484
>gi|121700981|ref|XP_001268755.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
gi|142982514|sp|A1CNV8.1|DRS1_ASPCL RecName: Full=ATP-dependent RNA helicase drs1
gi|119396898|gb|EAW07329.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
Length = 826
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 216/484 (44%), Gaps = 120/484 (24%)
Query: 2 EEAKKKSMPVLPWMRS---PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV 58
EEA+K+ P ++ P F+D L P L L ++ ++ P+Q
Sbjct: 283 EEAEKRKAFFAPEEKTTEEPTSKRSFQDFNLSR-PIL-----RGLASVNFTTPTPIQ--- 333
Query: 59 WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQ 116
Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+Q
Sbjct: 334 -QKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQ 392
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
C N+ +A H+ C VG
Sbjct: 393 ---------CYNVATKLATHTDVTFC------------------------------QLVG 413
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 414 GFSLREQENILKKRP---------------------DVIIATPGRFIDHMRNSPSFTVDT 452
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L LV+DE DR+L + + L +L T +P S +T
Sbjct: 453 LEILVLDEADRMLEDGFADELNEIL---------------TTIPK---SRQT-------- 486
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYKLIC 353
M+ SAT+T +KL ++ L+ P+ L + T L + +
Sbjct: 487 ------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEFVRLRPGR 534
Query: 354 ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 413
E K + YL+ L + + IVF + HR+ + FG L +K E G Q R
Sbjct: 535 EGK-RLGYLLYLCSEIFTGRVIVFFRQKKEAHRVRIV---FGLLGLKAAELHGSMSQEQR 590
Query: 414 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 473
K++++FREGK+ L+++D +RG+D++GV V+NY+ P + Y+HR GRTARAG+ GR
Sbjct: 591 IKSVESFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGR 650
Query: 474 CFTL 477
T+
Sbjct: 651 ACTI 654
>gi|170083961|ref|XP_001873204.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650756|gb|EDR14996.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 355
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 205/459 (44%), Gaps = 121/459 (26%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK ++ ++G + P+Q A I L +D+ N+ TGSGKT ++ +P+V+ L
Sbjct: 6 PLLK-SIASLGFNKPTPIQAA----AIPVALLGKDVVGNAMTGSGKTAAFIIPMVERLLY 60
Query: 97 R-------AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
R A RCL V++PTR+LA+Q C ++ ++ H+ ++C
Sbjct: 61 REKGKKAAATRCL---VLVPTRELAVQ---------CFDVGVKLSTHTDIQLC------- 101
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
L VG S+ + L RP
Sbjct: 102 -----------------------LLVGGLSLKSQEVALRARP------------------ 120
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
DI++ATPGRL+DHI + FTL+ + LV+DE DR+L + + L +
Sbjct: 121 ---DIVIATPGRLIDHIRNSPAFTLDAIDILVLDEADRMLSDGFADELAEI--------- 168
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
I+ C V R M+ SAT+T ++L ++ L+
Sbjct: 169 -------------------IKSCPVSRQ----------TMLFSATMTDSVDELVKMSLNK 199
Query: 330 PLFLTTGETRYKLPERLESYKLICESK--LKPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
P+ L + ++ + + K + LVAL + + + I+F S + H++
Sbjct: 200 PVRLFVDPRKATARGLVQEFVRVRAGKDSERSALLVALCKRTFKNRVIIFLRSKKLAHQM 259
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
+ + G +K +E G Q R K L+ FR+G++ L+++D +RG+D++GV ++
Sbjct: 260 RIVFSLLG---LKCEELHGDLSQEQRLKALQLFRDGQVDFLMATDLASRGLDIKGVETII 316
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTL---LHKDEV 483
NYD P + Y+HR GRTARAG+ GR L + DEV
Sbjct: 317 NYDMPGQLSQYLHRVGRTARAGKQGRVHILVAFMSSDEV 355
>gi|402590562|gb|EJW84492.1| DEAD box ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 462
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 186/421 (44%), Gaps = 103/421 (24%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIG---------- 109
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
+ F A+ ++G+ + + VG + L
Sbjct: 110 -----------------------------EQFEALGASIGILIAVIVGGIDTVTQSLALA 140
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
KRP ++VATPGRL+DH+ T+GF L L YLV+DE DR+
Sbjct: 141 KRP---------------------HVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L ++ L +L++ + T+L
Sbjct: 180 LNMDFEVELEKILKVIPKERR-------TYL----------------------------- 203
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 368
SAT+T+ KL + L P+ + ++Y+ ++L+ Y + K K YL+ +L
Sbjct: 204 --YSATMTKKVAKLERASLVDPVRIEVS-SKYQTVDKLKQYYIFIPYKYKEAYLIYILNE 260
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
+ + IVF S+ S + +L G + + G Q+ R +L F+ VL
Sbjct: 261 MAGQTAIVFCSTCASALKTALMLRKLGFGAVPL---HGQMSQAKRLGSLNKFKSKASTVL 317
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
V +D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T + + +V+ ++K
Sbjct: 318 VCTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTARAGRSGVAVTFVTQYDVEIYQK 377
Query: 489 L 489
+
Sbjct: 378 I 378
>gi|194863559|ref|XP_001970500.1| GG23340 [Drosophila erecta]
gi|190662367|gb|EDV59559.1| GG23340 [Drosophila erecta]
Length = 782
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSVEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 204/477 (42%), Gaps = 110/477 (23%)
Query: 15 MRSPVDVSLFEDCP--LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
M SP + S P + +DP L+ A++ +G + +Q E + L RD+
Sbjct: 1 MPSPEEASTSAANPPSFKSIGLIDPLLE-AVEQLGYKTPTDIQA----EALPHALEGRDI 55
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+ TGSGKT ++ALPI+Q L N + L A V+ PTR+LA Q++
Sbjct: 56 IGVASTGSGKTAAFALPIIQALWNDP-KGLFACVIAPTRELAYQISQQ------------ 102
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 192
F A+ +G+ + +G + + L K+P
Sbjct: 103 ---------------------------FEALGSGIGVRCAVIIGGMDVVSQSIALAKKPH 135
Query: 193 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 252
I+VATPGRL H+ T+GF+L L + V+DE DRLL
Sbjct: 136 ---------------------IIVATPGRLNYHLENTKGFSLRGLKFFVLDEADRLLDMD 174
Query: 253 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 312
+ + +L++ + +T+L S
Sbjct: 175 FGPDIDKILKVIPKER-------TTYL-------------------------------FS 196
Query: 313 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 372
AT+T KL + L +P+ + ++Y L Y L K ++LV L +L +
Sbjct: 197 ATMTTKVAKLQRASLQNPVRVEV-SSKYSTVSTLLQYYLFMPLSHKEVHLVNLANTLAQN 255
Query: 373 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT +V +L +L G + + G QS R L F+ G +LV++D
Sbjct: 256 SMMIFTRTVHDAQKLSIILRTLGFPAVPLH---GQLSQSQRLGALSKFKSGGRSILVATD 312
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL+ + +++ ++
Sbjct: 313 VASRGLDIPSVDVVINFDIPTHSKDYIHRVGRTARAGRAGKSITLVTQYDIELIHRI 369
>gi|296394809|ref|YP_003659693.1| DEAD/DEAH box helicase [Segniliparus rotundus DSM 44985]
gi|296181956|gb|ADG98862.1| DEAD/DEAH box helicase domain protein [Segniliparus rotundus DSM
44985]
Length = 452
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 198/454 (43%), Gaps = 111/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-- 99
AL G+++ FP+Q A + P L RD+ PTGSGKTL++ LP++ L+N A
Sbjct: 18 ALAKAGVTAPFPIQAAA----LPPALEGRDVLGRGPTGSGKTLTFGLPMLARLANGASKP 73
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R R LV++PTR+LA QV SA
Sbjct: 74 RKPRGLVLVPTRELAAQVASA--------------------------------------- 94
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+A +VGL VG S+ +I EL + VD+LVATP
Sbjct: 95 LTPLAASVGLRTASVVGGLSMQRQIDELAR---------------------GVDVLVATP 133
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL DH+ A L+ + +DE D++ A +LP V+++
Sbjct: 134 GRLADHL-AQGTVVLDEVSVTALDEADQM---ADMGFLPQVVKIL--------------- 174
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
D+ + +++ SATL +KL + L +P +T
Sbjct: 175 --------------------DRTPKKGQRLLFSATLDGQVDKLVRRYLDNPATCSTAPAA 214
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
+ +E + L + + K L + + E + I+F + RL L G +
Sbjct: 215 ASV-STMEHHMLFVDQEQKKLVVTEIAAR--EGRTILFVHTKHGADRLTKRLRAVG---V 268
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
G + Q+ R++TL+AF+ G + VLV+++ RG+ ++GV+ VV+ D PA K Y+
Sbjct: 269 SAAAIHGGKAQNNRTRTLEAFKSGDVAVLVATNVAARGVHIDGVDLVVHVDPPADPKDYL 328
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
HRAGRTARAG+ G TL+ E + + + + A
Sbjct: 329 HRAGRTARAGESGVVITLVTPAERRDAEAMARAA 362
>gi|21356161|ref|NP_651970.1| Rs1 [Drosophila melanogaster]
gi|7304081|gb|AAF59119.1| Rs1 [Drosophila melanogaster]
gi|28626484|gb|AAO49161.1| LD15481p [Drosophila melanogaster]
Length = 782
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 205/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF ++
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTTI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF + + HRL LL G ++ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILLGLLG---VRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|448091961|ref|XP_004197457.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|448096550|ref|XP_004198488.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359378879|emb|CCE85138.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359379910|emb|CCE84107.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
Length = 719
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 188/434 (43%), Gaps = 117/434 (26%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLA 114
A+ I L +D+ + TGSGKT +Y +PI++ L + + +R +V+ PTR+LA
Sbjct: 231 AIQSSAIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPSKISAIRVIVLTPTRELA 290
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
+QV H + + +F L+ GLA
Sbjct: 291 IQV------------------HDVGKKIGRF--------------------VNNLNFGLA 312
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
VG ++ + +L RP DI++ATPGRL+DHI + F++
Sbjct: 313 VGGLNLRQQEQQLKSRP---------------------DIVIATPGRLIDHIRNSPSFSI 351
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
+ L +V+DE DR+L E +QA L +L L
Sbjct: 352 DTLEIMVIDEADRMLDEGFQAELTEILSLV------------------------------ 381
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 354
P + ++ SAT+ L QL L P+ + P + + KL+ E
Sbjct: 382 -------PKQKRQTLLFSATMNTKIQDLIQLSLDRPVRIMID------PPKATTAKLVQE 428
Query: 355 -------SKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
LKP L LL ++ +++ +VF S+ + HRL LL L +K+ E
Sbjct: 429 FVRIRKRDHLKPALLFELLNTIDSSNQDRIVVFVSTKGTAHRLRVLLGV---LGLKVSEL 485
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R K + F+E K+ VL+ +D RG+D+ + V+NYD P + Y+HR GR
Sbjct: 486 HGALTQEQRLKNVTDFKELKVSVLICTDLAARGLDIPKIEFVINYDMPKTHEIYLHRVGR 545
Query: 465 TARAGQLGRCFTLL 478
TARAG+ GR TL+
Sbjct: 546 TARAGREGRSITLV 559
>gi|58271466|ref|XP_572889.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115044|ref|XP_773820.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819312|sp|P0CR01.1|RRP3_CRYNB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|338819313|sp|P0CR00.1|RRP3_CRYNJ RecName: Full=ATP-dependent rRNA helicase RRP3
gi|50256448|gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229148|gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 484
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 200/455 (43%), Gaps = 107/455 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+ P L A +MG +Q E I L +D+ + TGSGKT +++LPI+QTL
Sbjct: 45 ISPELCRACASMGFKKPSDIQA----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTL 100
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ ALV+ PTR+LA Q++
Sbjct: 101 WENP-QPFFALVLAPTRELAYQISQ----------------------------------- 124
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
QV ++ +G+ + VG + + L KRP I
Sbjct: 125 QV----TSLGSGIGVRTAVLVGGMDMMSQSIALSKRPH---------------------I 159
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL + + +L++ +
Sbjct: 160 IVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKILKVIPKER------ 213
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + L+ P+ +
Sbjct: 214 -NTYL-------------------------------FSATMTTKVAKLQRASLNKPVRVE 241
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
++Y L + L+ K K YL+ L L ++FT +V + RL +L
Sbjct: 242 V-SSKYSTVSTLLQHYLLLPLKNKDAYLLYLANELSSSSMMIFTRTVADSQRLSIILRRL 300
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I + G QS+R +L F+ G +LV++D +RG+D+ V+ V+NYD P
Sbjct: 301 GFPAIPLH---GQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTN 357
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
K Y+HR GRTARAG+ G+ TL+ + +V+ +++
Sbjct: 358 SKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRI 392
>gi|195431333|ref|XP_002063697.1| GK15774 [Drosophila willistoni]
gi|194159782|gb|EDW74683.1| GK15774 [Drosophila willistoni]
Length = 792
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 203/466 (43%), Gaps = 113/466 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLP 109
P+Q + TI L RD+C + TG+GKT +Y LP ++ L R + R LV++P
Sbjct: 184 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKTITRVLVLVP 239
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+L QV + + + QF S+
Sbjct: 240 TRELGAQV------------------YQVTKQLCQFTSI--------------------- 260
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
VGLA+G + + + L + P DI++ATPGRL+DHI T
Sbjct: 261 DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIKNT 299
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F+L+ + L++DE DR+L E + + + I
Sbjct: 300 PSFSLDSIEVLILDEADRMLDEYFAEQMKEI----------------------------I 331
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPERL 346
C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 332 NSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEF 381
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ E +P+ L +L+ + C+VF + + HRL LL G L ++ E G
Sbjct: 382 IRIREDKEGDREPI-LASLICRTFHDHCMVFVQTKKQAHRLHILL---GLLNVRAGELHG 437
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GRTA
Sbjct: 438 NLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTA 497
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
RAG+ G +L + E K K +++ A++ S IP +IE R
Sbjct: 498 RAGRAGISVSLAGEKERKIVKDIIKNAES-SVKNRIIPPEIIEKYR 542
>gi|121700629|ref|XP_001268579.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
gi|119396722|gb|EAW07153.1| DEAD/DEAH box helicase, putative [Aspergillus clavatus NRRL 1]
Length = 848
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 189/431 (43%), Gaps = 118/431 (27%)
Query: 1 MEEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW 59
+EEA+K S LP W+ +P+ S + L +D L L G F VQ V
Sbjct: 224 LEEAEKPSYSSLPEWLANPLRESSDKRAQFSEL-GIDSNLLRVLDQNGYKEAFAVQSTVI 282
Query: 60 QETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
+ G DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L Q
Sbjct: 283 PLLLQGSKRHAGDLCISAATGSGKTLSYVLPLVTALEPTPAPRMRGLIVVPTRELVKQAR 342
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
A C+ C A GL VG AVG
Sbjct: 343 EA-CELC--------------------------------------AAGSGLRVGSAVGNV 363
Query: 179 SIADEISELIKRPKLEAGICYDPE-----------------------------------D 203
+I DE L++ + CY PE
Sbjct: 364 AIKDEQRTLMRIDQ-----CYGPEISKQRQTVDLTGEDWTKFNLLDYIAEAGDLSESLPG 418
Query: 204 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 263
+Q+ + VDIL+ TPGRL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V+
Sbjct: 419 YIQKAEPNVDILICTPGRLVDHLRYTKGFTLEHLEWLVIDEADRLLNESFQEWVDVVMN- 477
Query: 264 TRSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
S + P AFGS + + G+ K+ PR K++LSAT+T+D +KL
Sbjct: 478 ---------SLDARKSPKAFGSSGQFMAELGLPIQVKE---PR--KVILSATMTRDVSKL 523
Query: 323 AQLDLHHPLFL---------------TTGETRYKLPERLESYKL-ICESKLKPLYLVALL 366
L L +P + + ++ +P L+ Y + + + KPLYL++LL
Sbjct: 524 NSLRLANPKLVIVSSADPTSTEDGGHVKSDEQFTIPRTLKEYSVSVGDGSQKPLYLLSLL 583
Query: 367 QS----LGEEK 373
+S L EE+
Sbjct: 584 RSHINVLAEEQ 594
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 374 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S ES RL L++ L ++ + S KTL A+R GKI ++V++D
Sbjct: 676 VLIFTKSSESASRLSRLISLLDPSLANQVGTIIKSNKSSASRKTLTAYRRGKISIIVATD 735
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
+RG+D++ + +VVNYD P + TY+HR GRTARAG+ G +TL+ E + F+ + K
Sbjct: 736 RASRGLDLQSLTHVVNYDVPPSVTTYVHRVGRTARAGKKGSAWTLVAHREGRWFENEISK 795
Query: 493 ADN 495
A +
Sbjct: 796 ASD 798
>gi|268563805|ref|XP_002638939.1| Hypothetical protein CBG22166 [Caenorhabditis briggsae]
Length = 753
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 221/515 (42%), Gaps = 138/515 (26%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVA---------VWQETIGPGLFERDLCINSPTGSGKTL 84
LD + V+ + M +S A + Q I L +D+C + TG+GKT
Sbjct: 136 SLDTNVNVSFEQMNLSRQILKACAGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTA 195
Query: 85 SYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
++ LPI++ + R C R LV++PTR+LA+
Sbjct: 196 AFVLPILERMIYRPKGASCTRVLVLVPTRELAI--------------------------- 228
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
QV VF ++ + L V L G G+ +
Sbjct: 229 ------------QVFQVFRKLSTFIQLEVCLCAG-------------------GLDLKAQ 257
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTL----------------------EHLCYL 240
+ L+S D++VATPGRL+DH++ + F L ++L L
Sbjct: 258 EAA--LRSGPDVVVATPGRLIDHLHNSPSFNLASIEVFLSLEKEKFRNSEIQESKNLKVL 315
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE DR+L EA++ + +++L ENR +
Sbjct: 316 VLDEADRMLEEAFRDQMNELIRLC---AENRQT--------------------------- 345
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE---TRYKLPERLESYKLICESKL 357
++ SAT+T++ ++LA + L P+ + E T KL + + E+
Sbjct: 346 --------LLFSATMTEEIDELASMSLKKPVKIFINENTDTALKLRQEFIRIRAGRETDR 397
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
+ + + AL+ + IVF + + R+ LL G IK+ + Q R ++L
Sbjct: 398 ESM-VAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLG---IKVGQMQSSLTQGQRIESL 453
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F++G+I VLVS+D +RG+D+EGV V+N + P IK YIHR GRTARAG+ GR +L
Sbjct: 454 SKFKKGEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISL 513
Query: 478 LHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
+ ++E K K+++ + + + ++E+ R
Sbjct: 514 VGEEERKLLKEIVNSNADRTLKQRLVAPEVVEAYR 548
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 191/435 (43%), Gaps = 105/435 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E I L +D+ + TGSGKT ++ALPI+Q L R AL++ PTR+LA Q+
Sbjct: 63 IQKEAIPVALQGKDIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTRELAFQI 121
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 122 S---------------------------------------EQFEALGASIGVKCAVIVGG 142
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I++ATPGRL+DH+ T+GF L+ L
Sbjct: 143 MDMVAQALILSKKPH---------------------IIIATPGRLVDHLENTKGFNLKAL 181
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YLV+DE DR+L ++ + +L++
Sbjct: 182 KYLVMDEADRILNMDFEVEVDKILRVI--------------------------------- 208
Query: 298 FKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
PR + L SAT+T+ KL + L P+ + T+Y+ E+L+ Y + K
Sbjct: 209 ------PRERRTYLFSATMTKKVQKLQRASLQDPVKVEVS-TKYQTVEKLQQYYIFIPVK 261
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K +YLV +L L IVF S+ R+ LL G + + G Q R
Sbjct: 262 FKDVYLVHILNELAGNSFIVFVSTCAGALRVALLLRALGVGAVPL---HGQMSQQKRLAA 318
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L F+ VL+ +D +RG+D+ V+ VVN D P + K YIHR GRTARAG+ G+ T
Sbjct: 319 LNKFKSKARSVLICTDVASRGLDIPHVDVVVNLDIPLHSKDYIHRVGRTARAGRAGKAIT 378
Query: 477 LLHKDEVKRFKKLLQ 491
+ + +V+ ++++ Q
Sbjct: 379 FVSQYDVELYQRIEQ 393
>gi|357116154|ref|XP_003559848.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 449
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 178/418 (42%), Gaps = 103/418 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RDL TGSGKT ++ALPI+Q L R A V+ PTR+LA+Q
Sbjct: 56 RDLIGLGQTGSGKTGAFALPIIQALLEHR-RPFFACVMSPTRELAIQ------------- 101
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
IAE F A+ A+GL + VG ++ + K
Sbjct: 102 --------IAEQ------------------FEALGSAIGLVCSVLVGGVDRMQQVLSIAK 135
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
RP I+V TPGRL+DH+ T+GF+L + YLV+DE D+LL
Sbjct: 136 RPH---------------------IVVGTPGRLLDHLKDTKGFSLNKVKYLVLDEADKLL 174
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
++ L +L+ + T+L
Sbjct: 175 NLEFKESLDDILKAIPKERR-------TYL------------------------------ 197
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
SAT+T+ +KL + L +P + ++Y + L+ + K YLV L L
Sbjct: 198 -FSATMTKKVSKLQRACLRNPAKVEV-SSKYSTVDTLKQEWYFVPAAYKDCYLVHALNEL 255
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
++F + EST L L + G K SG Q R L F+ +L+
Sbjct: 256 PGSMIMIFVRTCESTRLLALTLRNLG---FKALSISGQMSQDKRLGALNKFKAKDFNILI 312
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
+D +RG+D++GV+ V+NYD P K YIHR GRTARAG+ G +L+++ E + FK
Sbjct: 313 CTDVASRGLDIQGVDAVINYDIPMNSKDYIHRVGRTARAGKSGYAVSLVNQYETEWFK 370
>gi|164661763|ref|XP_001732004.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
gi|159105905|gb|EDP44790.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
Length = 470
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 186/438 (42%), Gaps = 103/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + + I L RD+ + TGSGKT ++++PI+Q L + R L A ++ PTR
Sbjct: 45 FSAPTDIQAQAIPHALQGRDVIGLAQTGSGKTAAFSIPILQGLWDDP-RPLFACILAPTR 103
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+L+ Q++ Q++ A+ +G+
Sbjct: 104 ELSYQISQ-----------------------------------QIE----ALGATIGVRC 124
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
VG + + L KRP ++VATPGRL DH+ T+G
Sbjct: 125 ATIVGGMDMMTQSIALSKRPH---------------------VIVATPGRLQDHLENTKG 163
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L YLV+DE DRLL + + +LQ ++ RR
Sbjct: 164 FSLRSLRYLVMDEADRLLDLDFGPIIDKLLQ----------------------NIPKERR 201
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
M+ SAT+T KL + L +P+ + G T+Y L+ Y L
Sbjct: 202 T----------------MLFSATMTTKVAKLQRASLRNPVRIEIG-TKYSTVSTLQQYYL 244
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K YLV L IVFT +V RL LL G I + G Q+
Sbjct: 245 FMPFAHKDTYLVHLANEQVGHSIIVFTRTVHDAQRLAVLLRLLGFSAIPLH---GQLSQT 301
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L F+ G ++V +D RG+D+ V+ VVN+D P + K YIHR GRTARAG+
Sbjct: 302 ARLGALNKFKAGGRSIMVCTDVAARGLDIPAVDLVVNFDIPTHSKDYIHRVGRTARAGRQ 361
Query: 472 GRCFTLLHKDEVKRFKKL 489
GR TL+ + +V+ +++
Sbjct: 362 GRSVTLVTQYDVELLQRI 379
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 191/429 (44%), Gaps = 105/429 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RD+ +PTGSGKTL++ +PI+ L + + A V+ PTR+LA Q+++
Sbjct: 42 RDIIGIAPTGSGKTLAFVIPILHRLWDNP-QGYFACVLSPTRELAYQISAQ--------- 91
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
F A+ A+G+ + VG D + + ++
Sbjct: 92 ------------------------------FEALGAAMGVQSVVIVGGDD--DRVQQAVR 119
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
L I+VATPGRL DH+ +T+GF+L L +LV+DE DRLL
Sbjct: 120 ------------------LAQKPHIIVATPGRLHDHLKSTKGFSLRSLKHLVLDEADRLL 161
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
+Q + ++Q +P RC
Sbjct: 162 DLDFQREITEIMQ---------------SIPK--------ERC---------------TY 183
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
+ SAT+T + +KL + L P+ + RY L + L+C K + LV L+ SL
Sbjct: 184 LFSATMTANVSKLQRASLSDPVRVDASLFRYTTVSTLVQHYLLCPLVEKEVTLVYLINSL 243
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
+ IVF +V RL +L G + + G QS R F+ GK ++LV
Sbjct: 244 VQNLIIVFVRTVADAKRLSIILRSLGFDAVPLH---GELTQSQRLGAFTRFKSGKSKILV 300
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RF 486
++D +RG+DV V+ V+NYD P + K YIHR GRTARAG+ G+ ++ + + + R
Sbjct: 301 ATDVASRGLDVPNVDVVINYDTPTHSKDYIHRVGRTARAGRAGKSILMVTQYDAELMLRL 360
Query: 487 KKLL-QKAD 494
+K+L QK D
Sbjct: 361 EKVLNQKLD 369
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 188/432 (43%), Gaps = 102/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 86 IQEKSIPVALEGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 144
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
A F A+ + L + VG
Sbjct: 145 GQA---------------------------------------FEALGSLISLRCAVIVGG 165
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I+VATPGRL+DH+ T+GF+L L
Sbjct: 166 LDMVPQAIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLRTL 204
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YL++DE DRLL + + +L+ F+P RR
Sbjct: 205 KYLIMDEADRLLDMDFGPSIDKILK---------------FIPRE-------RRT----- 237
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT++ L + L P+ ++ +Y+ L + +
Sbjct: 238 -----------YLFSATISSKIESLQRASLRDPVRVSISSNKYQTVSTLLQHYIFIPHVR 286
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YL+ L+ + I+FT +V T R+ LL G I + G Q+ R L
Sbjct: 287 KDVYLIYLINEHVGKSTIIFTRTVWETQRISILLRTLGFGAIPL---HGQLSQTSRLGAL 343
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
FR G +LV++D RG+D+ V+ V+NYD P KTYIHR GRTARAG+ G ++
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGIAISV 403
Query: 478 LHKDEVKRFKKL 489
+ + +V+ F ++
Sbjct: 404 VTQYDVEIFTRI 415
>gi|270010045|gb|EFA06493.1| hypothetical protein TcasGA2_TC009390 [Tribolium castaneum]
Length = 691
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 230/526 (43%), Gaps = 134/526 (25%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLD-------HLPCLDPRLKVALQNMGISSLFPV 54
+E +KK+ P + + FE LD + P LK A+ +M P+
Sbjct: 114 KETRKKAAP---------NENFFETVDLDTEHASFYQMNLSRPLLK-AISDMKFVHPTPI 163
Query: 55 QVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLPTR 111
Q + TI L RD+C + TG+GKT +Y LP ++ L R V R LV++PTR
Sbjct: 164 QAS----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPVGGPPVTRVLVLVPTR 219
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+L +QV + + + QF + +
Sbjct: 220 ELGVQV------------------YQVTKQLAQFSDI---------------------QI 240
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
GLAVG + + + L K P DI++ATPGRL+DH+ +T
Sbjct: 241 GLAVGGLDLKAQETILRKNP---------------------DIVIATPGRLIDHLKSTPT 279
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F L+ + L++DE DR+L E + + + I++
Sbjct: 280 FGLDSIEVLILDEADRMLDEYFAEQMKEI----------------------------IKQ 311
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLES 348
C R M+ SAT+T++ LA + L+ P+ L + E + L +
Sbjct: 312 CARTRQT----------MLFSATMTEEVESLAAVSLNKPVRLFVDSNREVAFGLRQEFVR 361
Query: 349 YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 408
+ E + + L AL+ E C+VF + + HRL LL L +K+ E G
Sbjct: 362 IRQDKEGDREAI-LAALVCRTFREHCMVFVQTKKQAHRLHILLGL---LGLKVGELHGNL 417
Query: 409 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 468
Q R L+ F+E +I VLV++D RG+D++GV V+N+ PA ++ YIHR GRTARA
Sbjct: 418 TQPQRLDALQKFKETQIDVLVATDVAARGLDIQGVQTVINFVMPATVEHYIHRVGRTARA 477
Query: 469 GQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
G+ G +L + E K K +++KA + P+ S IP ++E +
Sbjct: 478 GRAGVSVSLAGEQERKIVKDVVKKAKH---PVKSRVIPPDILEKYK 520
>gi|443897915|dbj|GAC75254.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 909
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 212/521 (40%), Gaps = 159/521 (30%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
AL ++ P+Q TI L +D+ + TGSGKT ++ +P ++ L+ RA
Sbjct: 332 ALSSLSFHKPTPIQ----SRTIPIALAGKDIVAGAVTGSGKTAAFMIPAIERLTWRAKGR 387
Query: 102 L-----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R L++ PTR+LA+Q C +S+ + +F + F
Sbjct: 388 AQEAKSRVLILAPTRELAIQ---------C---------YSVGKSIAKFTDIRFC----- 424
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
L VG S+ + +EL RP ++++
Sbjct: 425 ----------------LCVGGLSVKSQEAELKLRP---------------------EVVI 447
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH+ + FTL+ + LV+DE DR+L + + L +
Sbjct: 448 ATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEI---------------- 491
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
++ C P M+ SAT+T D +L +L L P+ L
Sbjct: 492 ------------VKSC---------PKGARQTMLFSATMTDDVEQLVRLSLKRPVRL--- 527
Query: 337 ETRYKLPERLESYKLI-------------------------------------CESKLKP 359
+ P+R + KL+ E +P
Sbjct: 528 ---FVDPKRTTAKKLVQEFVRVRGTGTGGVAGADGLAGVGQEVSSSAPSGGKRSEDAQRP 584
Query: 360 LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
L+AL + I+F S + H+L + FG L + E G Q R L A
Sbjct: 585 ALLLALCTRTFTSQVIIFVRSKKLAHQLKIV---FGLLGLSAGELHGDLSQEQRIDALTA 641
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
FR+GK+ L+++D +RG+D++GV V+NYD P + Y+HR GRTARAG+ GR TL+
Sbjct: 642 FRDGKVDFLIATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVG 701
Query: 480 KDEVKRFKKLLQKADNDSCPIHSIPSSL-------IESLRP 513
+ + + K ++K+ D IP+ + +E L+P
Sbjct: 702 EADRRMLKLAIKKSSADQIKHRIIPAEVAGKMLETLEELKP 742
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 194/450 (43%), Gaps = 115/450 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A N+G + +Q+ E I L +D+ + TGSGKT ++ALPI+ L N
Sbjct: 23 ACDNLGWKTPLKIQI----EAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLQAPRPN 78
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
C V+ PTR+LA+Q++
Sbjct: 79 HFFAC----VLSPTRELAIQIS-------------------------------------- 96
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ F A+ +G+ + VG + + ++ K P I+V
Sbjct: 97 -EQFEALGSGIGVKSAVLVGGIDMVQQSIKIAKHPH---------------------IIV 134
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGR++DH+ T+GF+L L YLV+DE DRLL E ++ L +L + +
Sbjct: 135 GTPGRVLDHLKNTKGFSLSKLKYLVLDEADRLLNEDFEESLNEILGMIPRERR------- 187
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
TFL SAT+T+ KL ++ L +P+ +
Sbjct: 188 TFL-------------------------------FSATMTKKVEKLQRVCLRNPVKIEA- 215
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
T+Y + L+ +K K YLV +L + +VFT + ++T L +L + G
Sbjct: 216 STKYSTVDTLKQQYRFLPAKRKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGL 275
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I I +G Q R L F+ G +L+ +D +RG+D+ V+ V+NYD P K
Sbjct: 276 KAIPI---NGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSK 332
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
YIHR GRTARAG+ G +L+++ E++ +
Sbjct: 333 DYIHRVGRTARAGRSGVAISLVNQYELEWY 362
>gi|327293469|ref|XP_003231431.1| ATP-dependent RNA helicase DBP6 [Trichophyton rubrum CBS 118892]
gi|326466547|gb|EGD92000.1| ATP-dependent RNA helicase DBP6 [Trichophyton rubrum CBS 118892]
Length = 812
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 172/381 (45%), Gaps = 117/381 (30%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L +
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPTRYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPIAK 295
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LRAL+++PTR+L QV A C+ C
Sbjct: 296 LRALIIVPTRELVKQVRDA-CELCSS---------------------------------- 320
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE------------------- 202
GL +G AVG +++ DE +++ +E Y PE
Sbjct: 321 ----GSGLRIGTAVGSTALKDEQAQI-----MEQTSVYRPESTRRQDDTTMTADEWASFS 371
Query: 203 --DVLQELQS--------------AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 246
D + E + VDIL+ TPGRL+DHI +T+GFTL+ L +LV+DE D
Sbjct: 372 LVDYIAEAEEYSRTLPDHCIESSPCVDILICTPGRLVDHIRSTKGFTLDSLEWLVIDEAD 431
Query: 247 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP-- 304
RLL E++Q W+ TVL +T P+A GSL+ + K +P
Sbjct: 432 RLLNESFQEWVGTVLPALE----------TTEKPAAPGSLQQL--------IKAFSFPVE 473
Query: 305 --RLVKMVLSATLTQDPNKLAQLDLHHPLFL----TTG----------ETRYKLPERLES 348
+L K++LSAT+T+D +KL L LH+P + T G ++ LP L
Sbjct: 474 SRKLQKVILSATMTRDISKLNSLRLHNPKLVVVDGTEGDEAGVGEAGPDSNIALPSLLNE 533
Query: 349 YKL-ICESKLKPLYLVALLQS 368
+ + + KPLYL+ LLQS
Sbjct: 534 NSIPVGDGSEKPLYLLKLLQS 554
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 374 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+RG+D+ ++NVVNYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVVNYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|156083170|ref|XP_001609069.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796319|gb|EDO05501.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 433
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 197/453 (43%), Gaps = 104/453 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A Q+MG + P+Q+A I L RD+ + TGSGKT ++ +P++ L
Sbjct: 52 PELCKACQSMGWQAPTPIQMAA----IPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLE 107
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R + +V+ P+R+L C+ Q+
Sbjct: 108 DVQR-IYCVVLAPSREL------------CE---------------------------QI 127
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ F A++ ++ L V + +G + + S L KRP ++V
Sbjct: 128 AEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPH---------------------VIV 166
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
A+PGRL DH+ T+GF+L + LV+DE DRLL + + L ++ ++ +
Sbjct: 167 ASPGRLADHVENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQ------- 219
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
TFL SAT+T+ +KL ++ L P+ +
Sbjct: 220 TFL-------------------------------FSATMTKKLSKLQKMALKDPISVQVD 248
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ +Y E L+ L+ K K YL ALL IVF + + R L
Sbjct: 249 D-KYSTAENLDQRFLLVPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQRCAAYLKGLKF 307
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I G Q+ RS+ L+ F+ G + +LV+++ RG+D+ V V+N+D P K
Sbjct: 308 TTICKVCLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELVINFDIPECSK 367
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
YIHR GRTARAG+ G T++ + +V+ F+++
Sbjct: 368 DYIHRVGRTARAGRSGLALTVVTQYDVELFQRI 400
>gi|339250128|ref|XP_003374049.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316969700|gb|EFV53757.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 693
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 215/489 (43%), Gaps = 121/489 (24%)
Query: 16 RSPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCI 74
RS ++SL FE+ L L A+ +M + P+Q A I L +D+C
Sbjct: 145 RSKYNISLTFEEMNLSR------SLNKAISSMNYVNPTPIQSAC----IPVALLGKDICA 194
Query: 75 NSPTGSGKTLSYALPIVQTLSNRAV--RCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+ TG+GKT +Y +PI++ L + V R R LV++PTR+LA+QV
Sbjct: 195 CAATGTGKTCAYMIPILERLLFKPVGRRITRVLVMVPTRELAMQVY-------------- 240
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPK 192
+ +A +S+ L+ G + +
Sbjct: 241 -------------------------ETGTTLAKYTSISIALSTGGMDLKSQ--------- 266
Query: 193 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 252
EA + +P D+++ATPGRL+DH++ + GF L + LV+DE DR+L E
Sbjct: 267 -EAALRLNP-----------DVVIATPGRLIDHLHNSPGFNLNGVEILVLDEADRMLDEH 314
Query: 253 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 312
++ + L+ +R C P M+ S
Sbjct: 315 FEEQM----------------------------LEIMRLCS----------PTRQAMLFS 336
Query: 313 ATLTQDPNKLAQLDLHHPLFLTTGE-TRYKLPERLESYKLICESKL-KPLYLVALLQSLG 370
AT+T LA + L P+ L E T L R + ++ E + + L ALL+
Sbjct: 337 ATMTDKVKDLASVSLKKPVKLFVNENTEMALNLRQQFVRIRKERECSREASLAALLKRSF 396
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 430
K ++F + E HRL LL L I++ E G Q+ R L+ F++G + VLV+
Sbjct: 397 TSKVLLFAGTKEVCHRLRLLLGL---LGIRVAELHGNLSQAQRIDALEQFKKGVVDVLVA 453
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+D RG+DV+GV V+NY P K Y+HR GRTARAG+ G + + +D+ K K+++
Sbjct: 454 TDVAARGIDVQGVKTVINYQMPHVFKLYVHRVGRTARAGRSGCAVSFVSEDDRKLVKEIV 513
Query: 491 QKADNDSCP 499
+ CP
Sbjct: 514 K-----HCP 517
>gi|281208721|gb|EFA82896.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 803
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 202/465 (43%), Gaps = 126/465 (27%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 98
L+ A+Q +G + P+Q +TI P C + TGSGKT ++ LPI++ L R
Sbjct: 192 LQKAVQKLGFTMPTPIQA----KTIPPST----QC--ATTGSGKTAAFLLPILERLLYRD 241
Query: 99 V--RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
V R +R LV+LPTR+LALQ C S+ E QF
Sbjct: 242 VDNRAIRVLVLLPTRELALQ---------C---------QSVLENLAQF----------- 272
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
++ L VG S + EL KRP D+++
Sbjct: 273 ----------TNITSCLVVGGLSNKVQEVELRKRP---------------------DVVI 301
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH+ L+ L LV+DE DRLL ++ L
Sbjct: 302 ATPGRLIDHLLNAHDVGLDDLEILVLDEADRLLDMGFKDELE------------------ 343
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
K + C R ++ SATL+ + LA+L L P+ +
Sbjct: 344 ----------KIVESCPANRQ----------SLLFSATLSDEVKTLAKLSLKQPIRVAV- 382
Query: 337 ETRYKLPERLESYKLICESKLKPLYLV---ALLQSLGEE-----KCIVFTSSVESTHRLC 388
+ Y++ LE + K++P L ALL SL I+F S + HRLC
Sbjct: 383 DALYQVASTLEQEFV----KIRPTQLGDRPALLLSLASRVFNTGGTIIFFKSKKEVHRLC 438
Query: 389 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 448
+ FG + E G Q R ++L+ FR+GK+Q L++SD RG+DV GV V+N
Sbjct: 439 II---FGLAGLSAAELHGDLSQEQRFESLQLFRDGKVQFLLASDVAARGLDVLGVKTVIN 495
Query: 449 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
Y+ P + YIHR GRTARAG GR + + + + K K ++ +A
Sbjct: 496 YNIPRNLAQYIHRVGRTARAGAQGRACSFVTEGDRKILKDIVSRA 540
>gi|170044624|ref|XP_001849941.1| ATP-dependent RNA helicase DRS1 [Culex quinquefasciatus]
gi|167867695|gb|EDS31078.1| ATP-dependent RNA helicase DRS1 [Culex quinquefasciatus]
Length = 807
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 212/468 (45%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 109
P+Q A TI L RD+C + TG+GKT +Y LP ++ L + A R LV++P
Sbjct: 211 PIQAA----TIPIALMGRDVCGCAATGTGKTAAYMLPTLERLLYKPSAAQAVTRVLVLVP 266
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+L QV + + + Q+ S+
Sbjct: 267 TRELGAQV------------------YQVTKQLTQYTSI--------------------- 287
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
VG+A+G G+ ++ + L++ DI++ATPGRL+DHI T
Sbjct: 288 EVGIAIG-------------------GLDVKAQEAV--LRTNPDIVIATPGRLIDHIKNT 326
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F+L+ + L++DE DR+L E + + ++Q
Sbjct: 327 PSFSLDSIEVLILDEADRMLDEYFAEQMKEIIQ--------------------------- 359
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGET-RYKLPERL 346
C R M+ SAT+T LA + L P+ F+ +T + L +
Sbjct: 360 -SCSKSRQT----------MLFSATMTDQVKDLAAVSLSKPVKVFVNNNQTVAFNLRQEF 408
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ ++ +P+ L AL+ + C+VF + ++ HRL LL L +K E G
Sbjct: 409 IRIRESRDADREPI-LAALICRTFHDHCMVFVQTKKTAHRLRILLGL---LGVKAGELHG 464
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
QS R ++LK F++ +I VLV++D RG+D+ GV V+N+ PA ++ YIHR GRTA
Sbjct: 465 DLTQSQRLESLKQFKDEQIDVLVATDVAARGLDISGVKTVINFVMPATMEHYIHRVGRTA 524
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
RAG+ G +L + E K K +++ A N P+ + IP+ ++E R
Sbjct: 525 RAGKAGVSVSLAGELERKIVKDIIKNAVN---PVKNRIIPNEIVEKYR 569
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 181/421 (42%), Gaps = 102/421 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +++I L RD+ + TGSGKT ++ALP++Q L ++ + L LV+ PTR+LA Q+
Sbjct: 86 IQEQSIPVALQGRDIIGLAETGSGKTAAFALPVLQALLDKP-QPLFGLVLAPTRELATQI 144
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
A F A+ + L + VG
Sbjct: 145 GQA---------------------------------------FEALGSLISLRCAVIVGG 165
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + L K+P I+VATPGRL+DH+ T+GF+L L
Sbjct: 166 LDMVPQSIALGKKPH---------------------IIVATPGRLVDHLEKTKGFSLRTL 204
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YL++DE DRLL + + +L+ F+P RR
Sbjct: 205 KYLIMDEADRLLDMDFGPSIDKILK---------------FVPRE-------RRT----- 237
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT++ L + L P+ ++ +Y+ L + L
Sbjct: 238 -----------YLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQHYLFIPHPQ 286
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K ++L+ L+ + IVFT +V T R+ LL G I + G QS R L
Sbjct: 287 KDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLH---GQLSQSSRLGAL 343
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
FR G +LV++D RG+D+ V+ V+NYD P KTY+HR GRTARAG+ G +L
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYVHRVGRTARAGKSGVAISL 403
Query: 478 L 478
+
Sbjct: 404 V 404
>gi|444726438|gb|ELW66972.1| ATP-dependent RNA helicase DDX51 [Tupaia chinensis]
Length = 478
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 171/368 (46%), Gaps = 40/368 (10%)
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
I + QV VF A L V L GQ +A E L+++ P+
Sbjct: 132 FVIPVVQVSKVFNVYTDATPLRVALLTGQKPLAKEQESLVQK---------TPDG----Y 178
Query: 209 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 268
+ DI+VATPGRL+DHI+ T F+L+ L +L+ +LL A P LQ
Sbjct: 179 RCLADIVVATPGRLVDHIDQTPAFSLQQLRFLM--PLQKLLFSATLTQNPEKLQQLGLYQ 236
Query: 269 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 328
F +T LP G G P L+ L +D +++
Sbjct: 237 PRLF---TTGLPQRSPGDAGADVDGSSGGKYAFPAGLSPLGALALVLRKDFSRII----- 288
Query: 329 HPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 388
F + E + L KPL + L+ + + FT+S E++HRL
Sbjct: 289 --CFTNSRENSHSLSS-------------KPLVALHLVLRKDFSRILCFTNSRENSHRLF 333
Query: 389 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 448
L+ FG + E+S R + LK F +GKIQ+L+S+DA RG+DV GV V+N
Sbjct: 334 LLVRAFGG--VNAAEFSSRLGPGCRKRLLKQFEQGKIQLLISTDATARGIDVPGVELVLN 391
Query: 449 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLI 508
YD P Y + Y+HR GRTARAGQ G+ FTLL + + +RF ++L +A + H IP ++
Sbjct: 392 YDAPQYPRAYVHRVGRTARAGQTGQAFTLLLRVQERRFLQMLAEAGVPTLERHEIPGDVL 451
Query: 509 ESLRPVYK 516
+ L P Y+
Sbjct: 452 QPLVPRYE 459
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 13/93 (13%)
Query: 13 PWMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET------- 62
PW+ P V ++ D P++++P + P L+ L+ GISS FPVQ AV
Sbjct: 46 PWLAEPRRVKKNVTADLVPIENIPEVHPDLQKQLRAHGISSYFPVQAAVIPVVLESAANG 105
Query: 63 --IGPGLFE-RDLCINSPTGSGKTLSYALPIVQ 92
+G G + DLC+++PTGSGKTL++ +P+VQ
Sbjct: 106 FLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQ 138
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 192/438 (43%), Gaps = 103/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + E+I L +D+ + TGSGKT ++ALP++Q+L + + A V+ PTR
Sbjct: 79 FKTPTPIQTESIPYALQNKDIIGLAQTGSGKTAAFALPVLQSLWD-SPSAFFACVLAPTR 137
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ QFD A+ +G+
Sbjct: 138 ELAYQISQ------------------------QFD---------------ALGSTIGVKT 158
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L KRP ++VATPGRL DH+ T+G
Sbjct: 159 VVIVGGMDMMSQAIALSKRPH---------------------VIVATPGRLHDHLEHTKG 197
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L +L +L++DE DRLL + + +L++ + + T+L
Sbjct: 198 FSLRNLQFLIMDEADRLLDMDFGPVIDKILKVIPKERK-------TYL------------ 238
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
SAT+T KL + L++P+ + + +++Y L
Sbjct: 239 -------------------FSATMTTKVAKLQRASLNNPVKVEVSAKYDTVSALVQTY-L 278
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K YLV L L + IVFT +V RL +L G + + G QS
Sbjct: 279 FLPFKHKDTYLVYLANELSGKSLIVFTRTVHDASRLSLILRTLGFPAVPLH---GQLSQS 335
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L F+ G +LV++D +RG+D+ V+ V+N+D P K YIHR GRTARAG+
Sbjct: 336 ARLGALNKFKSGDQSLLVATDVASRGLDIPAVDCVINFDLPTNSKDYIHRVGRTARAGRS 395
Query: 472 GRCFTLLHKDEVKRFKKL 489
G+ TL+ + +V+ +++
Sbjct: 396 GKSITLVTQYDVELLQRI 413
>gi|119494918|ref|XP_001264258.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
gi|142982588|sp|A1D1R8.1|DRS1_NEOFI RecName: Full=ATP-dependent RNA helicase drs1
gi|119412420|gb|EAW22361.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
Length = 819
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 199/437 (45%), Gaps = 108/437 (24%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
G++S+ F + Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 313 GLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 372
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
+++PTR+LA+Q C N+ +A H+ + F L
Sbjct: 373 VAILMPTRELAVQ---------CYNVATKLATHT---------DITFCQL---------- 404
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 405 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 432
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ + FT++ L LV+DE DR+L + + L +L T +P
Sbjct: 433 DHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPQ-- 475
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 340
S +T M+ SAT+T +KL ++ L+ P+ L + T
Sbjct: 476 -SRQT--------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSM 514
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
L + + E K + YL+ L + + IVF HR+ + FG L +K
Sbjct: 515 NLTQEFVRLRPGREDK-RLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIV---FGLLGLK 570
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E G Q R K+++ FREGK+ L+++D +RG+D++GV V+NY+ P + Y+H
Sbjct: 571 AAELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLH 630
Query: 461 RAGRTARAGQLGRCFTL 477
R GRTARAG+ GR T+
Sbjct: 631 RVGRTARAGRSGRACTI 647
>gi|242222657|ref|XP_002477039.1| predicted protein [Postia placenta Mad-698-R]
gi|220723636|gb|EED77767.1| predicted protein [Postia placenta Mad-698-R]
Length = 389
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 205/459 (44%), Gaps = 110/459 (23%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ AL+ + F + + + + L RD+ + TGSGKT ++ALPI+
Sbjct: 24 LGLIDPLLE-ALEQLN----FKIPTEIQVQALPHALQGRDIIGVASTGSGKTAAFALPIL 78
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
Q L + L A ++ PTR+LA Q++
Sbjct: 79 QKLWEEP-KGLFACIMAPTRELAYQISQ-------------------------------- 105
Query: 152 SLPQVKDVFAAIAPAVGLS-VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 210
Q++ A+ A+G+ V L G +A ++ L KRP
Sbjct: 106 ---QIE----ALGSAMGVRCVTLVGGMDKMAQAVA-LAKRPH------------------ 139
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
I+VATPGRL DH+ T+GF+L L +LV+DE DRLL D +
Sbjct: 140 ---IVVATPGRLNDHLEDTKGFSLRGLKFLVLDEADRLL-----------------DMD- 178
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
FG + +++ K P R + SAT+T KL + L +P
Sbjct: 179 ------------FGPI-------IDKILKAIPRER-TTYLFSATMTTKVAKLQRASLSNP 218
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + E +Y L Y L K ++L+ L L + I+FT +V RL +
Sbjct: 219 VRVEVSE-KYSTVSTLLQYYLFIPLVQKDVHLIYLANILAQNSIIIFTRTVHDAQRLSII 277
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L G + + G QS R L F+ G +VLV++D +RG+D+ V+ V+NYD
Sbjct: 278 LRTLGFPAVPLH---GQLSQSARLGALGKFKSGGRKVLVATDVASRGLDIPHVDVVINYD 334
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
P + K YIHR GRTARAG+ G+ TL+ + +V+ +++
Sbjct: 335 IPTHSKDYIHRVGRTARAGRSGKSITLVTQYDVELIQRI 373
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 187/421 (44%), Gaps = 103/421 (24%)
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
+RD+ + TGSGKT ++A+PI+Q L + L ALV+ PTR+LA Q+
Sbjct: 61 KRDIIGLAETGSGKTAAFAIPILQALLETPQK-LFALVLTPTRELAFQIG---------- 109
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
+ F A+ ++G+ + + VG + L
Sbjct: 110 -----------------------------EQFEALGASIGILIAVIVGGVDTVTQSLALA 140
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
KRP ++VATPGRL+DH+ T+GF L L YLV+DE DR+
Sbjct: 141 KRPH---------------------VIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L ++ + +L++ +P RR
Sbjct: 180 LNMDFEVEVEKILKV---------------IPKE-------RRT---------------- 201
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS 368
+ SAT+T+ KL + L+ P+ + ++Y+ ++L+ Y + K K YLV +L
Sbjct: 202 YLYSATMTKKVAKLERASLNDPVRIEVS-SKYQTVDKLKQYYIFIPYKYKEAYLVYILNE 260
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
+ + IVF S+ S R +L G + + G Q+ R +L F+ L
Sbjct: 261 MAGQTAIVFCSTCVSALRTALMLRKLGFGAVPL---HGQMSQAKRLGSLNKFKSKTSTTL 317
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
+ +D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T + + +V+ +++
Sbjct: 318 ICTDVASRGLDIPHVDLVLNYDVPTQSKDYVHRVGRTARAGRSGVAVTFVTQYDVEIYQR 377
Query: 489 L 489
+
Sbjct: 378 I 378
>gi|401624697|gb|EJS42747.1| drs1p [Saccharomyces arboricola H-6]
Length = 747
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 198/448 (44%), Gaps = 111/448 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 236 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 290
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV AD + + +F LP
Sbjct: 291 KPAKIAATRVIVLLPTRELAIQV----------------AD--VGKQIARF-------LP 325
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
G++ GLAVG ++ + L RP DI
Sbjct: 326 -------------GITFGLAVGGLNLRQQEQLLKTRP---------------------DI 351
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 352 VIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELSEIMGLLPSNRQN---- 407
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
++ SAT+ L L L P+ +
Sbjct: 408 ----------------------------------LLFSATMNSKIKSLVSLSLKRPVRIM 433
Query: 335 TGETRYKLPERLESY-KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTL 390
+ + + ++ LKP L L++ L G+++ +VF + E+ HRL +
Sbjct: 434 IDPPKQAAARLTQEFVRIRKRDHLKPSLLFNLIRKLDPMGQKRIVVFVARKETAHRLRIV 493
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
+ G L + + E G Q R ++ F+ ++ VLV +D +RG+D+ + VVNYD
Sbjct: 494 M---GLLGMGVGELHGSLTQEQRLDSVNKFKNLEVPVLVCTDLASRGLDIPKIEVVVNYD 550
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLL 478
P + Y+HR GRTARAG+ GR TL+
Sbjct: 551 MPKSYEIYLHRVGRTARAGREGRSVTLV 578
>gi|328869268|gb|EGG17646.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 860
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 204/465 (43%), Gaps = 120/465 (25%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 98
L+ A+ +G + P+Q + I L +D+ ++ TGSGKT ++ LPI++ L R
Sbjct: 245 LQKAVAKLGYTQPTPIQA----KAIPLILNGKDILASATTGSGKTAAFILPILERLLYRD 300
Query: 99 V--RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R R L+VLPTR+LALQ C ++F +A + + C
Sbjct: 301 ATHRVSRVLIVLPTRELALQ---------CHSVFESLAQFTNVQSC-------------- 337
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
L VG S + EL KRP D+++
Sbjct: 338 ----------------LVVGGLSNKVQEHELRKRP---------------------DVII 360
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH+ LE + LV+DE DRLL ++ L V++
Sbjct: 361 ATPGRLIDHLLNAHDVGLEDIEILVLDEADRLLDMGFKDELNRVVE-------------- 406
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
C P R ++ SATL+ D LA+L L P+ +
Sbjct: 407 --------------SC---------PDGRQT-LLFSATLSDDVKLLAKLSLSQPVRVAV- 441
Query: 337 ETRYKLPERLESYKLICESKLKPLYL---VALLQSL-----GEEKCIVFTSSVESTHRLC 388
+ +++ LE + K+KP L A+L SL CIVF S + HR+
Sbjct: 442 DALFQVASTLEQEFI----KIKPGQLADRTAMLLSLCTRVFNGGGCIVFFRSKKEVHRIA 497
Query: 389 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 448
LL G +K+ E G Q R + L++FR G++ L+++D RG+DV GV V+N
Sbjct: 498 ILLGLSG---LKVGELHGDLNQEQRFEALQSFRNGEVDFLLATDIAARGLDVLGVRTVIN 554
Query: 449 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
Y+ P + YIHR GRTARAG GR + + + + K K ++ +A
Sbjct: 555 YNMPRSLAQYIHRVGRTARAGLAGRSCSFITEADRKILKDIVSRA 599
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 185/443 (41%), Gaps = 105/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +++G + P+Q E I L RDL + TGSGKT ++ LPI+Q L ++ +
Sbjct: 65 ACESLGYKAPTPIQA----EAIPLALQGRDLIGLAETGSGKTAAFVLPILQALMDKP-QQ 119
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L +L++ PTR+LA Q++ +
Sbjct: 120 LHSLILAPTRELAYQIS---------------------------------------EAVE 140
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P ++VATPGR
Sbjct: 141 ALGSLIAVRCAVLVGGMDMITQAIALGKKPH---------------------VIVATPGR 179
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ + +
Sbjct: 180 LLDHLENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKILKILPREGRKTY--------- 230
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
+ SAT++ L + L +PL + + +Y+
Sbjct: 231 ----------------------------LFSATMSSKVESLQRASLSNPLRVAVSQDKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K LYL+ +L I+FT +V R+ LL G I I
Sbjct: 263 TVSTLIQSYLFIPHKHKDLYLIHILNEHAGHTGIIFTRTVNEAQRVSILLRTLGFSAIPI 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G Q R L FR +LV+SD RG+D+ V+ V+N+D P KTYIHR
Sbjct: 323 H---GQLSQQARLAALNKFRAKSRNLLVASDVAARGLDIPSVDLVINFDLPQDSKTYIHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 380 VGRTARAGKSGLAISFVTQYDVE 402
>gi|409045997|gb|EKM55477.1| hypothetical protein PHACADRAFT_184272 [Phanerochaete carnosa
HHB-10118-sp]
Length = 472
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 201/458 (43%), Gaps = 90/458 (19%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ ALQ + +S +Q A L RD+ + TGSGKT ++ALPI+
Sbjct: 26 LGLIDPLLE-ALQQLSFTSPTDIQTAALPH----ALEGRDIIGVASTGSGKTAAFALPIL 80
Query: 92 QTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
Q L + R L A V+ PTR+LA Q I +H
Sbjct: 81 QKLWDDP-RGLFACVIAPTRELAYQ----------------ITEH--------------- 108
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
F A+ A+G+ VG + L K+P
Sbjct: 109 --------FEALGSAMGVRCATVVGGIDEMSQAVALAKKPH------------------- 141
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
++VATPGRL H+ T+GF+L L +LV+DE DRLL + L +L++ +
Sbjct: 142 --VVVATPGRLQYHLENTKGFSLRSLKFLVLDEADRLLDMDFGPILDKILKVIPQER--- 196
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
+T+L F + T + ++R P V++ +S K A L L L
Sbjct: 197 ----TTYL---FSATMTTKVAKLQRASLSNP----VRVEVS-------EKYAPLLLIRLL 238
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
RY L Y L K + L+ L SL I+FT +V RL ++
Sbjct: 239 MRLRVSRRYSTVSTLLQYYLFIPLVQKDVNLMYLANSLASNSIIIFTRTVHDCQRLAIMM 298
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
G + + G QS R L F+ G +VLV++D +RG+D+ V+ V+NYD
Sbjct: 299 RTLGFPAVPLH---GQLSQSARLGALGKFKSGGRKVLVATDVASRGLDIPHVDAVINYDI 355
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
P + K YIHR GRTARAG+ G+ T + + +V+ +++
Sbjct: 356 PTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELVQRI 393
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 199/437 (45%), Gaps = 108/437 (24%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
G++S+ F + Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R
Sbjct: 324 GLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR 383
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
+++PTR+LA+Q C N+ +A H+ + F L
Sbjct: 384 VAILMPTRELAVQ---------CYNVATKLATHT---------DITFCQL---------- 415
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
VG S+ ++ + L KRP D+++ATPGR +
Sbjct: 416 -----------VGGFSLREQENILKKRP---------------------DVIIATPGRFI 443
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ + FT++ L LV+DE DR+L + + L +L T +P
Sbjct: 444 DHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTIPK-- 486
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRY 340
S +T M+ SAT+T +KL ++ L+ P+ L + T
Sbjct: 487 -SRQT--------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSM 525
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
L + + E K + YL+ L + + IVF HR+ + FG L +K
Sbjct: 526 NLTQEFVRLRPGREDK-RLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIV---FGLLGLK 581
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E G Q R K+++ FREGK+ L+++D +RG+D++GV V+NY+ P + Y+H
Sbjct: 582 AAELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLH 641
Query: 461 RAGRTARAGQLGRCFTL 477
R GRTARAG+ GR T+
Sbjct: 642 RVGRTARAGRSGRACTI 658
>gi|225468923|ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
vinifera]
Length = 470
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 199/446 (44%), Gaps = 109/446 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +Q E I L +DL + TGSGKT ++ALPI+Q L + +
Sbjct: 57 ACENLGWKTPSKIQA----EAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLD-TPQV 111
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L A V+ PTR+LA+Q IAE F
Sbjct: 112 LFACVLSPTRELAIQ---------------------IAEQ------------------FE 132
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ +GL + VG + L KRP I+V TPGR
Sbjct: 133 ALGSGIGLKCAVLVGGVDHTQQAIALAKRP---------------------HIVVGTPGR 171
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
LMDH++ T+GF+L + YLV+DE DRLL + ++ + +L +
Sbjct: 172 LMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEILSVI----------------- 214
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRY 340
PR K L SAT+T+ KL + L +P+ + ++Y
Sbjct: 215 ----------------------PRERKTYLFSATMTKKVRKLQRACLRNPVKIEVA-SKY 251
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
+ L+ +K K YLV +L L +VFT + ++T L LL + G I
Sbjct: 252 STVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIP 311
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
I SG Q+ R L F+ G+ +L+ +D +RG+D+ V+ V+NYD P+ K YIH
Sbjct: 312 I---SGHMSQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIH 368
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRF 486
R GRTARAG+ G +L+++ E++ +
Sbjct: 369 RVGRTARAGRSGVAISLVNQYELEWY 394
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 192/432 (44%), Gaps = 103/432 (23%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTRDLA 114
+ + E I L +D+ + TGSGKT ++ALPI+ L + A V+ PTR+LA
Sbjct: 33 LKIQTEAIPLALEGKDVIGLAQTGSGKTGAFALPILHALLEAPRPKDFFACVLSPTRELA 92
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
+Q IAE F A+ +G+ +
Sbjct: 93 IQ---------------------IAEQ------------------FEALGSEIGVKCAVL 113
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
VG + + ++ K+P I+V TPGR++DH+ T+GF+L
Sbjct: 114 VGGIDMVQQSIKIAKQP---------------------HIIVGTPGRVIDHLKHTKGFSL 152
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
L YLV+DE DRLL E ++ L +LQ+ + TFL
Sbjct: 153 SRLKYLVLDEADRLLNEDFEESLNEILQMIPRERR-------TFL--------------- 190
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 354
SAT+T+ KL ++ L +P+ + ++Y + L+
Sbjct: 191 ----------------FSATMTKKVQKLQRVCLRNPVKIEA-SSKYSTVDTLKQQYRFLP 233
Query: 355 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRS 414
+K K YLV +L + +VFT + ++T L +L + G I I +G QS R
Sbjct: 234 AKHKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPI---NGHMSQSKRL 290
Query: 415 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 474
L F+ G+ +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G
Sbjct: 291 GALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVA 350
Query: 475 FTLLHKDEVKRF 486
+L+++ E++ +
Sbjct: 351 ISLVNQYELEWY 362
>gi|320164743|gb|EFW41642.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 594
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 199/455 (43%), Gaps = 111/455 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A MG + P+Q +++I L RD+ + TGSGKT S+ALP++Q L
Sbjct: 155 PSLVEACSRMGFKAPTPIQ----RQSIPVALTGRDIIGLAETGSGKTASFALPVLQKLLE 210
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ + L AL++ PTR+LA Q++
Sbjct: 211 KP-QPLFALILTPTRELAYQIS-------------------------------------- 231
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ F A+ +G+ + VG + + L K+P IL+
Sbjct: 232 -EQFEALGSTIGVKCCVIVGGMDMTTQAIALSKKP---------------------HILI 269
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGR++DH+ T+G+ L +L++DE DR+L ++ + +L+ + +
Sbjct: 270 ATPGRIVDHLENTKGY----LKFLIMDEADRILNMDFEEEVDKILKAIPKER-------N 318
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
T+L SAT+T KL + L +P+ +
Sbjct: 319 TYL-------------------------------YSATMTSKVAKLQRASLRNPVKIEVA 347
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
T+Y+ L L ++ K YL L L I+FT + + R+ +L + G
Sbjct: 348 -TKYQTVGTLVQQYLFIPARFKDCYLTYALNQLAGNSTIIFTMTCANAQRVALMLRNLGF 406
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + G Q R L F+E +LV++D +RG+D+ V+ V+NYD P + K
Sbjct: 407 PAIPL---HGQLTQPKRLGALNKFKEQSRSILVATDVASRGLDIPHVDLVINYDIPTHSK 463
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
YIHR GRTARAG+ GR T++ + +V+ F+++ Q
Sbjct: 464 DYIHRVGRTARAGRSGRSITMVTQYDVELFQRIEQ 498
>gi|258563228|ref|XP_002582359.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
gi|237907866|gb|EEP82267.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
Length = 836
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 201/440 (45%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V
Sbjct: 326 GLAAVGFSAPTPIQ----RKAIPVGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKV 381
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R ++++PTR+LA+Q C N+ A + + F L
Sbjct: 382 PTSRVVILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 417
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L +RP D+++ATP
Sbjct: 418 ---------------VGGFSLREQENVLKQRP---------------------DVIIATP 441
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 442 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 486
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 487 PKSRQT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDAKK 523
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K + YLV L Q++ + IVF + HR + FG L
Sbjct: 524 QTVGTLVQEFVRLRPGREGKRMGYLVLLCQTVYTNRVIVFFRQKKEAHRARIV---FGLL 580
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P +
Sbjct: 581 GLKAAELHGSMSQEQRIHAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEI 640
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR T+
Sbjct: 641 YLHRVGRTARAGRSGRACTI 660
>gi|302499370|ref|XP_003011681.1| DEAD/DEAH box helicase, putative [Arthroderma benhamiae CBS 112371]
gi|291175233|gb|EFE31041.1| DEAD/DEAH box helicase, putative [Arthroderma benhamiae CBS 112371]
Length = 812
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 153/303 (50%), Gaps = 33/303 (10%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L+N G + PVQ AV GP + D+C+++ TGSGKTL+Y LPI L V
Sbjct: 236 LKNKGYTEALPVQSAVIPLLAKGPARYTGDVCVSAATGSGKTLAYVLPIFAGLKRLPVAK 295
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LRAL+++PTR+L QV A C+ C GL ++ ++ + + V +
Sbjct: 296 LRALIIVPTRELVKQVRDA-CELCSSG-SGLRIGTAVGSTALKDEQAQIMEQISVYRPES 353
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ + S+ D I+E + K G C E VD+L+ TPGR
Sbjct: 354 TRSQNGTIMTADEWASFSLVDYIAEAEEYSKTLPGHCI-------ESSPCVDVLICTPGR 406
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DHI +T+GFTL+ L +LV+DE DRLL E++Q W+ TVL + + P+
Sbjct: 407 LVDHIRSTKGFTLDSLEWLVIDEADRLLNESFQEWVETVLPALETKEK----------PA 456
Query: 282 AFGSLKTIRRCGVERGFKDKPYP----RLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTG 336
A GSL+ + K YP +L K++LSAT+T+D KL L LH+P L + G
Sbjct: 457 ATGSLEQL--------IKALSYPAESRKLQKVILSATMTRDITKLNSLRLHNPKLVVVDG 508
Query: 337 ETR 339
R
Sbjct: 509 AER 511
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 374 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S E+ RL LL + L K+ + S + + +R+GKIQ+++++D
Sbjct: 635 VLIFTKSSEAASRLSRLLTLMYPYLDGKVGTLIKSNKSSTSRRAISGYRKGKIQIIIATD 694
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E + F
Sbjct: 695 RASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGSAWTLVTHSEGRWF 748
>gi|402591826|gb|EJW85755.1| Ddx49 protein [Wuchereria bancrofti]
Length = 461
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 192/437 (43%), Gaps = 114/437 (26%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
L+++ I++ PVQV + D+ + TG+GKTL++ LPI+ L+ +
Sbjct: 59 LRHLAINTPTPVQVNCIPHILAGS----DVLGCAKTGTGKTLAFGLPILHELALDPY-GI 113
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
AL++ PTR+LA+Q+ D FAA
Sbjct: 114 CALILTPTRELAMQIG---------------------------------------DQFAA 134
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
+ ++GL +G+ VG + S+L +RP I+VATPGRL
Sbjct: 135 LGTSIGLKIGIIVGGKDRVAQSSDLARRPH---------------------IIVATPGRL 173
Query: 223 MDHINA---TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
DH+ + G E L +LV+DE DRLL Y L T+L TFL
Sbjct: 174 ADHLESDSENTGKLFEKLRFLVLDEADRLLDGQYSVELKTIL---------------TFL 218
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P +L + SAT+T ++L Q+ + P F ++
Sbjct: 219 PKQRQTL-----------------------LFSATITSALSQLHQVSVKKPYFFED-KSE 254
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRLCTLLNHFG 395
++LE ++C +K YLV ++++ E+ ++F+ + L + + G
Sbjct: 255 IATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPESLILIFSHTCRECQALAIMFHGLG 314
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
K+ Q R+ +L FR G+I++L+ +D +RG+D+ V+ VVN++ P
Sbjct: 315 ---FKVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVVNHNVPQNP 371
Query: 456 KTYIHRAGRTARAGQLG 472
KTYIHR GR+ARAG+ G
Sbjct: 372 KTYIHRVGRSARAGRFG 388
>gi|189238701|ref|XP_968537.2| PREDICTED: similar to Rs1 CG2173-PA [Tribolium castaneum]
Length = 1657
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 229/518 (44%), Gaps = 120/518 (23%)
Query: 3 EAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
E +KK+ P + + VD+ E + P LK A+ +M P+Q + T
Sbjct: 1081 ETRKKAAPNENFFET-VDLDT-EHASFYQMNLSRPLLK-AISDMKFVHPTPIQAS----T 1133
Query: 63 IGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRALVVLPTRDLALQVNS 119
I L RD+C + TG+GKT +Y LP ++ L R V R LV++PTR+L +QV
Sbjct: 1134 IPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPVGGPPVTRVLVLVPTRELGVQV-- 1191
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
+ + + QF + +GLAVG
Sbjct: 1192 ----------------YQVTKQLAQFSDI---------------------QIGLAVGGLD 1214
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
+ + + L K P DI++ATPGRL+DH+ +T F L+ +
Sbjct: 1215 LKAQETILRKNP---------------------DIVIATPGRLIDHLKSTPTFGLDSIEV 1253
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
L++DE DR+L E + + + I++C R
Sbjct: 1254 LILDEADRMLDEYFAEQMKEI----------------------------IKQCARTRQT- 1284
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYKLICESK 356
M+ SAT+T++ LA + L+ P+ L + E + L + + E
Sbjct: 1285 ---------MLFSATMTEEVESLAAVSLNKPVRLFVDSNREVAFGLRQEFVRIRQDKEGD 1335
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
+ + L AL+ E C+VF + + HRL LL L +K+ E G Q R
Sbjct: 1336 REAI-LAALVCRTFREHCMVFVQTKKQAHRLHILLGL---LGLKVGELHGNLTQPQRLDA 1391
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L+ F+E +I VLV++D RG+D++GV V+N+ PA ++ YIHR GRTARAG+ G +
Sbjct: 1392 LQKFKETQIDVLVATDVAARGLDIQGVQTVINFVMPATVEHYIHRVGRTARAGRAGVSVS 1451
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
L + E K K +++KA + P+ S IP ++E +
Sbjct: 1452 LAGEQERKIVKDVVKKAKH---PVKSRVIPPDILEKYK 1486
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 204/478 (42%), Gaps = 109/478 (22%)
Query: 28 PLDHLPCLDPRLKVALQNMGISSL----FPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
P H P D L + L + +L F + TI L +D+ N+ TGSGKT
Sbjct: 165 PSSHEPAADSFLSMNLSRPILKALTALNFHTPTPIQASTIPVALLGKDIVGNAVTGSGKT 224
Query: 84 LSYALPIVQTL----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIA 139
++ +P+++ L ++ R ++++PTR+LA+Q C ++ +A H+
Sbjct: 225 AAFVIPMLERLLYRDKSKNAAATRCVILVPTRELAVQ---------CFDVATKLAAHTDV 275
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY 199
C L VG S+ + + L RP
Sbjct: 276 RFC------------------------------LIVGGLSVKAQEASLRLRP-------- 297
Query: 200 DPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPT 259
D+++ATPGRL+DH+ F L+ + LV+DE DR+L + + L
Sbjct: 298 -------------DVVIATPGRLIDHLRNAPQFGLDAVDILVLDEADRMLSDGFADELAE 344
Query: 260 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 319
++Q C P R M+ SAT+T
Sbjct: 345 IVQA----------------------------C---------PRGRQT-MLFSATMTDSV 366
Query: 320 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 379
++L ++ L+ P+ L R ++ + + + + L AL + + + I+F
Sbjct: 367 DELVKMSLNKPVRLFVDAKRTTARSLVQEFVRVRREEDRGGMLAALCKRTFKARAIIFFR 426
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
S + H++ F L + E G Q R ++L+ FR+G+I L+++D +RG+D
Sbjct: 427 SKKLAHQMRVA---FALLNLNAGELHGDLTQEQRLRSLQQFRDGQIDFLMATDLASRGLD 483
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDS 497
++GV V+NYD P + Y+HR GRTARAG GR TL+ + + K K ++ + N S
Sbjct: 484 IKGVEVVINYDMPGQLAQYLHRVGRTARAGARGRSVTLVGESDRKMLKAAIKHSANAS 541
>gi|410078383|ref|XP_003956773.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
gi|372463357|emb|CCF57638.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
Length = 739
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 200/457 (43%), Gaps = 115/457 (25%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 224 PVLK-GLSSLGFTKPSPIQSA----TIPIALLGKDIVAGAVTGSGKTAAFMIPIIERLLY 278
Query: 97 R--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ V R +++ PTR+LA+Q++
Sbjct: 279 KPAKVASTRVVILTPTRELAIQIS------------------------------------ 302
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV I V GL+ GLAVG ++ + L RP D
Sbjct: 303 ---DVAKKIGHFVNGLTFGLAVGGLNLRQQEQILKSRP---------------------D 338
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DH+ + F+++ + LV+DE DR+L E +Q L ++
Sbjct: 339 IVIATPGRFIDHVRNSASFSVDRVEILVLDEADRMLEEGFQDELSEIM------------ 386
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
T LP+ R ++ SAT+ +L L L P+ +
Sbjct: 387 ---TLLPT-----------------------RRQNLLFSATMNSKIKQLVSLSLKKPVRI 420
Query: 334 TTGETRYKLPERL--ESYKLICESKLKP--LY-LVALLQSLGEEKCIVFTSSVESTHRLC 388
+ + +RL E ++ LKP LY L+ L S G+++ +VF S E HRL
Sbjct: 421 MIDPPK-QAADRLVQEFVRIRKRDHLKPALLYNLIRKLDSTGQKRIVVFVSRKEVAHRLR 479
Query: 389 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 448
+L G + + E G Q R ++ F+ + VL+ +D +RG+D+ + V+N
Sbjct: 480 IILGLLG---MGVAELHGSLSQEQRLDSVNKFKSLDVPVLICTDLASRGLDIPKIEIVIN 536
Query: 449 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
YD P + Y+HR GRTARAG+ GR T + + +R
Sbjct: 537 YDMPKSYEIYLHRVGRTARAGREGRSVTFVGESSQER 573
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 185/428 (43%), Gaps = 113/428 (26%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
IAE F A+ + L + VG
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLVGGI 127
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
YLV+DE DRLL E ++ L +L+ + E TFL
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILEEIPLERE-------TFL------------------- 200
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
SAT+T+ KL + L +P+ + ++Y + L+ +K K
Sbjct: 201 ------------FSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKYK 247
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGALN 304
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L+
Sbjct: 305 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 364
Query: 479 HKDEVKRF 486
++ E++ +
Sbjct: 365 NQYELEWY 372
>gi|320583325|gb|EFW97540.1| ATP-dependent rRNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 470
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 194/459 (42%), Gaps = 115/459 (25%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
V+LF++ L P + A++ + S+ P+Q +++ L RD+ + TGS
Sbjct: 66 VTLFKEL------GLQPDILDAIEKLNFSTPTPIQA----QSLPHSLQGRDIIGIAQTGS 115
Query: 81 GKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
GKT ++A+PI+Q L A A V+ PTR+LA Q+
Sbjct: 116 GKTAAFAIPILQALWE-AQTPYFACVLAPTRELAYQI----------------------- 151
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
++ F A+ +GL VG + ++ EL+++P
Sbjct: 152 ----------------RETFDALGVNMGLRCSTIVGGMDMMEQAKELMRKPH-------- 187
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
++VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL + L +
Sbjct: 188 -------------VIVATPGRLMDHLENTKGFSLKALKYLVMDEADRLLDMEFGPVLDRI 234
Query: 261 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDP 319
L + PR K L SATLT
Sbjct: 235 LNII---------------------------------------PRERKTYLFSATLTSKV 255
Query: 320 NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 379
KL + L P+ + + +Y + L ++ K YL+ LL + IVF
Sbjct: 256 EKLQRASLIDPVKIAVND-KYSTVDTLIQTLMVVPDGYKNTYLIYLLNEYVGKSVIVFAR 314
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
+ ++ L G I + G Q+ R L F+ G Q+LV++D RG+D
Sbjct: 315 TCAHAQKVALLARILGFSAIPL---HGQLTQAQRLGALNKFKSGDKQILVATDVAARGLD 371
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+ V+ VVNYD P K YIHR GRTARAG+ G+ +L+
Sbjct: 372 IPSVDLVVNYDIPTDSKAYIHRVGRTARAGRSGKSVSLV 410
>gi|348667582|gb|EGZ07407.1| hypothetical protein PHYSODRAFT_527947 [Phytophthora sojae]
Length = 773
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 190/440 (43%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAV 99
A+ ++G P+Q Q I L +D+C ++ TGSGKT ++ LPI++ L +R V
Sbjct: 163 AISHIGFEKPTPIQ----QRAIPIALTGKDICASAQTGSGKTAAFLLPILERLQFRSRRV 218
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+ R +++ P R+LA Q S +
Sbjct: 219 QSTRTMIICPVRELATQCQS---------------------------------------M 239
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
F +A ++ LAVG + + +EL RP D++V TP
Sbjct: 240 FEQLARFTDITCSLAVGGLPLKAQEAELRNRP---------------------DVVVCTP 278
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ ++ ++ L LV+DE DRLL + VL+L
Sbjct: 279 GRMIDHLRNSKSVHMDDLEILVLDEADRLLELGF---TEEVLEL---------------- 319
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+R C V+R M+ SAT+T ++L L + P+ ++T
Sbjct: 320 ---------VRMCPVQRQ----------TMLFSATMTSKVDQLIDLSMKRPVRISTDPLF 360
Query: 340 YKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
++ + I ++ + L+AL IVF + HR+ + FG
Sbjct: 361 DMAKHLVQEFVRIRPNREDDREAILLALCTRTFRTNTIVFMETKSHAHRMMII---FGLA 417
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
IK E G Q R + L+ FR+G + +L+ +D RG+DV GV+ V+NY+ P I T
Sbjct: 418 GIKAAELHGNLMQRERLEALQKFRDGTVDILLCTDIAARGIDVRGVHAVINYEMPKDITT 477
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR TL
Sbjct: 478 YVHRVGRTARAGRNGRAVTL 497
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 208/459 (45%), Gaps = 119/459 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 307 GLASVGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTAAFIVPILERLLYRPRKV 362
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 363 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 398
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 399 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 422
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L L++DE DR+L + + L +L T +
Sbjct: 423 GRFIDHMRNSASFTVDTLEILILDEADRMLEDGFAEELNEIL---------------TTI 467
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 468 PKSRQT-----------------------MLFSATMTSSVDKLIRVGLNKPIRLMVDSKK 504
Query: 340 YKLPERLESYKLICESKLKP-------LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
+ ++ + +L+P YL+ L +++ + IVF + HR+ +
Sbjct: 505 QTVGTLVQEF-----VRLRPGREDKRLAYLMFLCKTVYTSRVIVFFRQKKEAHRVRIV-- 557
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
FG + +K E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P
Sbjct: 558 -FGLMGLKAAELHGSMSQEQRIKSVEDFRDGKVSYLLATDLASRGLDIKGVETVINYEAP 616
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
+ Y+HR GRTARAG+ GR T+ + + K K+ ++
Sbjct: 617 QSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKEAVK 655
>gi|119186507|ref|XP_001243860.1| hypothetical protein CIMG_03301 [Coccidioides immitis RS]
gi|118595360|sp|Q1E2B2.1|DRS1_COCIM RecName: Full=ATP-dependent RNA helicase DRS1
gi|392870577|gb|EAS32387.2| ATP-dependent RNA helicase DRS1 [Coccidioides immitis RS]
Length = 840
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 199/440 (45%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V
Sbjct: 333 GLAAVGFSAPTPIQ----RKAIPVGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKV 388
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 389 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 424
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L +RP D+++ATP
Sbjct: 425 ---------------VGGFSLREQENVLKQRP---------------------DVIIATP 448
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L
Sbjct: 449 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILN----------------- 491
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
TI P R M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 492 --------TI------------PKSRQT-MLFSATMTDSVDKLIRVGLNRPVRLMVDSKK 530
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + ++ + +L + K + YLV L ++ + IVF + HR + FG L
Sbjct: 531 HTVGTLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARII---FGLL 587
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P +
Sbjct: 588 GLKAAELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEI 647
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR T+
Sbjct: 648 YLHRVGRTARAGRSGRACTI 667
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 195/443 (44%), Gaps = 113/443 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 80 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 136
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ F A+ +GL + V
Sbjct: 137 QIGQQ---------------------------------------FEALGSGIGLIAAVIV 157
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 158 GGVDMAAQAMALARRP---------------------HIIVATPGRLVDHLENTKGFNLK 196
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 197 ALKFLIMDEADRILNMDFEVELDKILKVIPKERR-------TYL---------------- 233
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ +KL + L P ++ TRYK + L+ + + +
Sbjct: 234 ---------------FSATMTKKVSKLERASLRDPARVSV-STRYKTVDNLKQHYIFIPN 277
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI-------KIKEYSGLQ 408
K K YLV LL IVF ++ + ++ +L G + +++ LQ
Sbjct: 278 KYKETYLVYLLNEHAGNSAIVFCATCATAMQIAVMLRQLGMQAVPLHGQMSQVRFERPLQ 337
Query: 409 RQSVRSK--TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
S+ + +L F+ +LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTA
Sbjct: 338 VGSLEKRLGSLNKFKSKARDILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTA 397
Query: 467 RAGQLGRCFTLLHKDEVKRFKKL 489
RAG+ G T++ + +V+ ++K+
Sbjct: 398 RAGRSGLAITVVTQYDVEGYQKI 420
>gi|357121637|ref|XP_003562524.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 447
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 186/440 (42%), Gaps = 112/440 (25%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RDL TGSGKT ++ALPI+Q L + A V+ PTR+LA+Q
Sbjct: 56 RDLIGLGQTGSGKTGAFALPIIQALLEHR-QPFFACVMSPTRELAIQ------------- 101
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
IAE F A+ A+GL + VG ++ + K
Sbjct: 102 --------IAEQ------------------FEALGSAIGLVCSVLVGGVDRMQQVLSIAK 135
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
RP I+V TPGRL+DH+ T+GF+L + YLV+DE D+LL
Sbjct: 136 RPH---------------------IVVGTPGRLLDHLKDTKGFSLNKVKYLVLDEADKLL 174
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
++ L +L+ + T+L
Sbjct: 175 NLEFKESLDDILKAIPKERR-------TYL------------------------------ 197
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
SAT+T+ KL + L +P+ + ++Y + L+ + K YLV L L
Sbjct: 198 -FSATMTKKVAKLQRACLRNPVKVEV-SSKYSTVDTLKQEWYFVPAAYKDCYLVHALNEL 255
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
++F + EST L L + G K SG Q R L F+ +L+
Sbjct: 256 PGSMIMIFVRTCESTRLLALTLRNLG---FKALSISGQMSQDKRLGALNKFKAKDFNILI 312
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+D +RG+D++GV+ V+NYD P K Y+HR GRTARAG+ G +L+++ E + FK +
Sbjct: 313 CTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGKSGYAVSLVNQYEGQWFKMI 372
Query: 490 ---------LQKADNDSCPI 500
L+K D+D I
Sbjct: 373 EALLGKEIDLRKVDSDEIMI 392
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 181/429 (42%), Gaps = 106/429 (24%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 154 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 212
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ F A+ ++ L
Sbjct: 213 ELAAQIGQ---------------------------------------TFEALGASISLRC 233
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 234 AVVVGGLDMVSQSTALGKKPH---------------------IVVATPGRLLDHLEKTKG 272
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 273 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 310
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 311 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 354
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 409
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 355 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL-----HGQLS 409
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 410 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 469
Query: 470 QLGRCFTLL 478
+ GR +++
Sbjct: 470 RSGRAISII 478
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 181/429 (42%), Gaps = 106/429 (24%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ F A+ ++ L
Sbjct: 189 ELAAQIGQ---------------------------------------TFEALGASISLRC 209
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 210 AVVVGGLDMVSQSTALGKKPH---------------------IVVATPGRLLDHLEKTKG 248
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 249 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 286
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 287 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 330
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 409
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 331 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL-----HGQLS 385
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 386 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 445
Query: 470 QLGRCFTLL 478
+ GR +++
Sbjct: 446 RSGRAISII 454
>gi|237845351|ref|XP_002371973.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|61676032|gb|AAX51681.1| DEAD box RNA helicase [Toxoplasma gondii]
gi|211969637|gb|EEB04833.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 479
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 186/433 (42%), Gaps = 101/433 (23%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 76 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQR-FYALILAPTRELCLQ 134
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
++ A+ +G++V VG
Sbjct: 135 ISQQ---------------------------------------ILAMGGTLGVTVVTLVG 155
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ L K+P ++V +PGR++DH+ T+GF+L+
Sbjct: 156 GLDHNTQAIALAKKP---------------------HVVVGSPGRVVDHLQQTKGFSLKS 194
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
+ LV+DE DRLL + A L +L+ S E +
Sbjct: 195 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ------------------------- 229
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
M+ SAT+T +KL + L P+ L ++Y + L+ + L+ K
Sbjct: 230 -----------TMLFSATMTTKVSKLQKASLKKPVKLEV-NSKYDVASHLQQHFLLVPFK 277
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
LK +L A L L IVFT++ + + L H G + + G Q R
Sbjct: 278 LKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRHLGFQSVCLH---GKMTQPQRIGA 334
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L FR + LV+++ +RG+D+ V V+N+D P K YIHR GRTARAG+ GR T
Sbjct: 335 LTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALT 394
Query: 477 LLHKDEVKRFKKL 489
++ + +V+ ++++
Sbjct: 395 IVTQYDVEAYQRI 407
>gi|159131798|gb|EDP56911.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus A1163]
Length = 856
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 189/425 (44%), Gaps = 118/425 (27%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
EE +K + LP W+ +PV + L L+V L++ G F VQ
Sbjct: 225 EETEKPNYSSLPAWLANPVREPASKRARFSELGINSNLLRV-LEDHGYKEAFAVQ----- 278
Query: 61 ETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
T+ P L + DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L
Sbjct: 279 STVIPLLLQGLRRHPGDLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELV 338
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
Q A C+ C A GL +G A
Sbjct: 339 KQAREA-CELC--------------------------------------ATGSGLRIGSA 359
Query: 175 VGQSSIADEISELIK-----RPKL------------------------EAGICYDP-EDV 204
VG +I DE L++ P+L EAG +P
Sbjct: 360 VGNVAIKDEQRTLMRVDQCYGPELSKQRQTVDLTGEDWTNFSLMNYLAEAGELSEPLPGY 419
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 264
+Q + +DIL+ TPGRL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V++
Sbjct: 420 VQRAEPNIDILICTPGRLVDHLRYTKGFTLEHLQWLVIDEADRLLNESFQEWVDVVMK-- 477
Query: 265 RSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 323
S + P FGS K + G+ ++ PR K++LSAT+T+D +KL
Sbjct: 478 --------SLDARKAPKTFGSSGKFMAELGLPIQSRE---PR--KVILSATMTRDISKLN 524
Query: 324 QLDLHHPLFL-------------------TTGETRYKLPERLESYKL-ICESKLKPLYLV 363
L L +P + TT + ++ LP L+ Y + + + KPLYL+
Sbjct: 525 SLRLANPKLVIIGSAEPTATEEAEHDGVPTTSDEQFTLPSTLKEYSVSVGDGSQKPLYLL 584
Query: 364 ALLQS 368
LLQS
Sbjct: 585 QLLQS 589
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 374 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S ES RL L++ L ++ + S KTL A+R GKI ++V++D
Sbjct: 692 VLIFTKSSESASRLSRLISLLDPSLADRVGTIIKSNKSSASRKTLTAYRRGKISIIVATD 751
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
+RG+D+ + +VVNYD P + TY+HR GRTARAG+ G +TL+ E + F + K
Sbjct: 752 RASRGLDLVSLTHVVNYDVPPSVTTYVHRVGRTARAGKEGSAWTLVAHREGRWFVNEISK 811
Query: 493 ADN 495
+
Sbjct: 812 GSD 814
>gi|310791457|gb|EFQ26984.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 772
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 204/466 (43%), Gaps = 110/466 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L +G S P+Q +TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 261 GLAAVGFSKPTPIQA----KTIPIALMGKDVVGGAVTGSGKTGAFVVPILERLLYRPKKV 316
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++ PTR+LA+Q C H++A + + F
Sbjct: 317 PTSRVVILTPTRELAIQ---------C---------HAVATKLAAYTDIKFT-------- 350
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + EL RP D+++ATP
Sbjct: 351 -------------LAVGGLSLKAQEVELRLRP---------------------DVIIATP 376
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F ++ + LV+DE DR+L + + L +L T L
Sbjct: 377 GRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTL 421
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL +L ++ P + +
Sbjct: 422 PKSRQT-----------------------MLFSATMTSSVDKLVRLGMNKPARVMVDSQK 458
Query: 340 YKLPERL--ESYKLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
K L E +L + K + YLV + +++ E+ IVF + HR + FG
Sbjct: 459 NKTVGTLVQEFVRLRPGREEKRMGYLVHICKTMHTERVIVFFRQKKEAHRARII---FGL 515
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L + E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P I+
Sbjct: 516 LGMSCAELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQNIE 575
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ G TL + + K K ++ I S
Sbjct: 576 IYVHRVGRTARAGRTGIAITLAAEPDRKVVKAAVKAGKAQGAKIMS 621
>gi|303317730|ref|XP_003068867.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108548|gb|EER26722.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 840
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 199/440 (45%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V
Sbjct: 333 GLAAVGFSAPTPIQ----RKAIPIGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKV 388
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 389 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 424
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L +RP D+++ATP
Sbjct: 425 ---------------VGGFSLREQENVLKQRP---------------------DVIIATP 448
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L
Sbjct: 449 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILN----------------- 491
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
TI P R M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 492 --------TI------------PKSRQT-MLFSATMTDSVDKLIRVGLNRPVRLMVDSKK 530
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + ++ + +L + K + YLV L ++ + IVF + HR + FG L
Sbjct: 531 HTVGTLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARII---FGLL 587
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P +
Sbjct: 588 GLKAAELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEI 647
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR T+
Sbjct: 648 YLHRVGRTARAGRSGRACTI 667
>gi|221502154|gb|EEE27898.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 479
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 186/433 (42%), Gaps = 101/433 (23%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 76 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQR-FYALILAPTRELCLQ 134
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
++ A+ +G++V VG
Sbjct: 135 ISQQ---------------------------------------ILAMGGTLGVTVVTLVG 155
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ L K+P ++V +PGR++DH+ T+GF+L+
Sbjct: 156 GLDHNTQAIALAKKP---------------------HVVVGSPGRVVDHLQQTKGFSLKS 194
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
+ LV+DE DRLL + A L +L+ S E +
Sbjct: 195 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ------------------------- 229
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
M+ SAT+T +KL + L P+ L ++Y + L+ + L+ K
Sbjct: 230 -----------TMLFSATMTTKVSKLQKASLKKPVKLEV-NSKYDVASHLQQHFLLVPFK 277
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
LK +L A L L IVFT++ + + L H G + + G Q R
Sbjct: 278 LKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRHLGFQSVCLH---GKMTQPQRIGA 334
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L FR + LV+++ +RG+D+ V V+N+D P K YIHR GRTARAG+ GR T
Sbjct: 335 LTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALT 394
Query: 477 LLHKDEVKRFKKL 489
++ + +V+ ++++
Sbjct: 395 IVTQYDVEAYQRI 407
>gi|143454043|sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|125579336|gb|EAZ20482.1| hypothetical protein OsJ_36091 [Oryza sativa Japonica Group]
gi|215706455|dbj|BAG93311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 802
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 204/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 208 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 263
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA QV HS+ E QF +
Sbjct: 264 PAIRVLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC-------- 297
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L VG G S+ E++ L+S DI+VATP
Sbjct: 298 ---------LIVG---GLSTKVQEVA----------------------LRSMPDIVVATP 323
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L L++DE DRLL + A + +
Sbjct: 324 GRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQEL------------------- 364
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ N+L L L+ P+ L +
Sbjct: 365 ---------IRMC---------PRRRQT-MLFSATMTEEINELVTLSLNKPVRLEADPSL 405
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + E+ + + L L++ ++K I+F+ + S HRL + FG
Sbjct: 406 KRPATLTEEVVRIRRAREANQEAVLLALCLKTF-KDKVIIFSGTKHSAHRLKII---FGL 461
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +
Sbjct: 462 SGMKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDAR 521
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 522 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 558
>gi|301110278|ref|XP_002904219.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262096345|gb|EEY54397.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 758
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 190/440 (43%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAV 99
A+ ++G P+Q Q I L +D+C ++ TGSGKT ++ LPI++ L +R V
Sbjct: 145 AISHIGFEKPTPIQ----QRAIPIALTGKDICASAQTGSGKTAAFLLPILERLQFRSRRV 200
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+ R +++ P R+LA Q S +
Sbjct: 201 QSTRVMIICPVRELATQCQS---------------------------------------M 221
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+A ++ LAVG + + +EL RP D++V TP
Sbjct: 222 LEQLARFTDITCSLAVGGLPLKAQEAELRNRP---------------------DVVVCTP 260
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ ++ ++ L LV+DE DRLL + VL+L
Sbjct: 261 GRMIDHLRNSKSVHMDDLEILVLDEADRLLELGF---TEEVLEL---------------- 301
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+R C V+R M+ SAT+T ++L L + P+ ++T
Sbjct: 302 ---------VRMCPVQRQ----------TMLFSATMTSKVDQLIDLSMKRPVRISTDPLF 342
Query: 340 YKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
++ + I ++ + L+AL IVF + HR+ + FG
Sbjct: 343 DMAKHLVQEFVRIRPNREDDREAILLALCTRTFRSNTIVFMETKSHAHRMMII---FGLA 399
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
IK E G +Q R + L+ FR+G + VL+ +D RG+DV GV+ V+NY+ P I T
Sbjct: 400 GIKAAELHGNLQQRERLEALQKFRDGTVDVLLCTDIAARGIDVRGVHAVINYEMPKDITT 459
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR TL
Sbjct: 460 YVHRVGRTARAGRNGRAVTL 479
>gi|405120234|gb|AFR95005.1| ATP-dependent RNA helicase DRS1 [Cryptococcus neoformans var.
grubii H99]
Length = 813
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 205/489 (41%), Gaps = 118/489 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
AL ++ ++ P+Q I L RD+ ++ TGSGKT ++ +PI++ L +
Sbjct: 218 ALTSLQFTAPTPIQA----RAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGK 273
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
R LV+ PTR+LA+Q C+ K
Sbjct: 274 GGAACRVLVLCPTRELAVQ-----CEAVGK------------------------------ 298
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
A+A GL V A+ L G+ + + L++ DIL+A
Sbjct: 299 ----ALAEKGGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIA 335
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DH+ T FTL L LV+DE DR+L + L +
Sbjct: 336 TPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI----------------- 378
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
I+ C P R M+ SAT+T ++L +L L P+ +
Sbjct: 379 -----------IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDP 417
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG-- 395
R + + I + L+AL + EKCI+F S H++ + FG
Sbjct: 418 KRNTAKGLTQEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFGLK 477
Query: 396 --ELRIKIKEYSG----------LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
EL + + G + S R + L F+ G + L+++D +RG+D++GV
Sbjct: 478 AAELHGNLTQEQGSLPSKYRIGVMLTSSQRLQALNDFKAGTVDYLLATDLASRGLDIKGV 537
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 503
V+NYD P + Y HR GRTARAG+ GR +L+ + + K K +++A+ D I
Sbjct: 538 ETVINYDMPGQLAQYTHRVGRTARAGRKGRSISLVGEADRKMLKAAIKQAEADQVRHRII 597
Query: 504 PSSLIESLR 512
PS + +++
Sbjct: 598 PSEAVTAVK 606
>gi|226509858|ref|NP_001147574.1| ATP-dependent RNA helicase DRS1 [Zea mays]
gi|195612276|gb|ACG27968.1| ATP-dependent RNA helicase DRS1 [Zea mays]
Length = 770
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 205/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 176 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 231
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA QV HS+ E QF +
Sbjct: 232 PAIRVLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC-------- 265
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L VG G S+ E++ L+S DI+VATP
Sbjct: 266 ---------LIVG---GLSTKVQEVA----------------------LRSMPDIVVATP 291
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L +++DE DRLL + A + +
Sbjct: 292 GRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL------------------- 332
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ ++L +L L+ P+ L +
Sbjct: 333 ---------IRMC---------PKRRQT-MLFSATMTEEIDELIKLSLNKPVRLEADPSL 373
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + ES + + L L++ + I+F+ + +S HRL + FG
Sbjct: 374 KRPATLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGL 429
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ FR+ ++ L+++D RG+D+ GV V+N+ P +K
Sbjct: 430 SGMKAAELHGNLTQAQRLEALELFRKQEVDFLIATDVAARGIDIVGVQTVINFACPRDVK 489
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 490 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 526
>gi|320038882|gb|EFW20817.1| ATP-dependent RNA helicase DRS1 [Coccidioides posadasii str.
Silveira]
Length = 840
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 199/440 (45%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G S+ P+Q ++ I GL +DL + TGSGKT ++ +PI++ L R V
Sbjct: 333 GLAAVGFSAPTPIQ----RKAIPIGLLGKDLVGGAVTGSGKTAAFIIPILERLLYRPRKV 388
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 389 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 424
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L +RP D+++ATP
Sbjct: 425 ---------------VGGFSLREQENVLKQRP---------------------DVIIATP 448
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L
Sbjct: 449 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILN----------------- 491
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
TI P R M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 492 --------TI------------PKSRQT-MLFSATMTDSVDKLIRVGLNRPVRLMVDSKK 530
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + ++ + +L + K + YLV L ++ + IVF + HR + FG L
Sbjct: 531 HTVGTLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARII---FGLL 587
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R ++AFR+GK+ L+++D +RG+D++GV +V+NY+ P +
Sbjct: 588 GLKAAELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEI 647
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR T+
Sbjct: 648 YLHRVGRTARAGRSGRACTI 667
>gi|345563744|gb|EGX46729.1| hypothetical protein AOL_s00097g477 [Arthrobotrys oligospora ATCC
24927]
Length = 854
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 193/444 (43%), Gaps = 105/444 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLP 109
F A+ TI L RD+ + TGSGKT +Y +PI++ L R V R +++ P
Sbjct: 339 FTTPTAIQSRTIPIALLARDIVGGAVTGSGKTAAYMVPILERLLYRPKKVAQTRVVILTP 398
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+LA+QV H++A F + F
Sbjct: 399 TRELAIQV------------------HAVAVKLAAFTDIKFT------------------ 422
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
LAVG S+ + +EL +RP DI++ATPGR +DH+ +
Sbjct: 423 ---LAVGGLSLKAQEAELRQRP---------------------DIVIATPGRFIDHMRNS 458
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F + + LV+DE DR+L + + L +L KT+
Sbjct: 459 ASFHTDGIEILVLDEADRMLEDGFADELDEIL-------------------------KTL 493
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 349
P R M+ SAT+T +KL ++ + P+ L + + + +
Sbjct: 494 ------------PKSRQT-MLFSATMTDSVDKLVRVGMQKPVRLLVDSKKSTVATLTQEF 540
Query: 350 KLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
I + + LV L L + +CIVF S HR+ + FG L +K E G
Sbjct: 541 IRIRPGREGGRLAMLVLLATELYKSRCIVFFRSKVYAHRVRII---FGLLGLKAAELHGS 597
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
Q R K ++ FR+G + L+++D +RG+D++ V+ V+N++ P + Y HR GRTAR
Sbjct: 598 LSQEQRIKAVEQFRDGTVDFLLATDLASRGLDIKNVSYVINFELPQSHEIYTHRVGRTAR 657
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQ 491
AG+ GR TL + + K KK ++
Sbjct: 658 AGRSGRAITLAAEADRKIVKKAIK 681
>gi|390604335|gb|EIN13726.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 785
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 208/480 (43%), Gaps = 124/480 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
A+ ++ P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L +RA
Sbjct: 212 AITSLSFHKPTPIQAA----TIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLLYRDRAK 267
Query: 100 R--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
+ R LV++PTR+L +Q C + +A ++ C
Sbjct: 268 KSAATRCLVLVPTRELGVQ---------CFEVGTKLATYTDIRFC--------------- 303
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
LAVG S+ + + L +P D+++A
Sbjct: 304 ---------------LAVGGLSVKSQEAALRSKP---------------------DVVIA 327
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DH+ + F L+ L LV+DE DR+L + + L +
Sbjct: 328 TPGRLIDHLRNSPSFNLDALDILVLDEADRMLSDGFADELAEI----------------- 370
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
I+ C P R M+ SAT+T ++L ++ L P+ L
Sbjct: 371 -----------IKSC---------PKSRQT-MLFSATMTDSVDELVKMSLDKPVRL---- 405
Query: 338 TRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
+ P+R + LI E + LVAL + + I+F S + H++
Sbjct: 406 --FVDPKRSTAKGLIQEFVRVRAGKESERSAILVALCKRTFKSGVIIFFRSKKLAHQMRI 463
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
+ F L +K E G Q R K L+ FR+G + L+++D +RG+D++GV+ V+NY
Sbjct: 464 V---FSLLYMKCAELHGDLTQEQRLKALQQFRDGSVDFLMATDLASRGLDIKGVDIVINY 520
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI-PSSLI 508
D P + Y+HR GRTARAG+ GR TL+ + + K K ++ D H I PS I
Sbjct: 521 DMPGQLAQYLHRVGRTARAGKKGRSVTLVGEADRKMLKAAIKHGAGDDQVRHRIVPSEAI 580
>gi|115488568|ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group]
gi|113649278|dbj|BAF29790.1| Os12g0481100, partial [Oryza sativa Japonica Group]
Length = 832
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 204/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 238 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 293
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA QV HS+ E QF +
Sbjct: 294 PAIRVLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC-------- 327
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L VG G S+ E++ L+S DI+VATP
Sbjct: 328 ---------LIVG---GLSTKVQEVA----------------------LRSMPDIVVATP 353
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L L++DE DRLL + A + +
Sbjct: 354 GRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQEL------------------- 394
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ N+L L L+ P+ L +
Sbjct: 395 ---------IRMC---------PRRRQT-MLFSATMTEEINELVTLSLNKPVRLEADPSL 435
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + E+ + + L L++ ++K I+F+ + S HRL + FG
Sbjct: 436 KRPATLTEEVVRIRRAREANQEAVLLALCLKTF-KDKVIIFSGTKHSAHRLKII---FGL 491
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +
Sbjct: 492 SGMKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDAR 551
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 552 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 588
>gi|256087842|ref|XP_002580072.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646373|emb|CCD58966.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 454
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 110/449 (24%)
Query: 61 ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSA 120
+ I L ++D+ + TGSGKT ++A+PI+Q L ++ R AL++ PTR+LALQV
Sbjct: 33 KAIPAALRKKDIVGLAETGSGKTAAFAIPILQDLLSKP-RHNFALILTPTRELALQV--- 88
Query: 121 RCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSI 180
+C +F + GL V VG +
Sbjct: 89 KC------------------------------------LFMELGDKFGLKVVCLVGGQHV 112
Query: 181 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 240
D++ +L KR K ++V TPGR++ H+ T+ L H+ Y
Sbjct: 113 EDQVRDL-KRLKFH-------------------VIVGTPGRVVYHLENTKELRLNHVRYF 152
Query: 241 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 300
V+DE D++L + ++ L ++
Sbjct: 153 VLDEADQMLEDTFEQQLAFIIT-------------------------------------- 174
Query: 301 KPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL 360
K +P + SAT+TQ+ +K+ ++ P+ L ++Y ++L+ + K K
Sbjct: 175 KLHPNKQTFLYSATMTQNVDKIRKVCTKSPVILEVS-SKYSKVDKLDHAFVFIPDKEKDF 233
Query: 361 YLVALL---QSLGEEKCIVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKT 416
YL+ LL +S + + I+FTS+ + R+ +L + + +G+ +Q R +
Sbjct: 234 YLIYLLLSSKSADKSRSIIFTSTWRESFRIVAMLKSLADVISAASAPLNGVMQQDKRQSS 293
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD---KPAY---IKTYIHRAGRTARAGQ 470
L FR G++ +LV++D +RG+D V+ V+NYD +P++ K YIHR GRTARAG+
Sbjct: 294 LFDFRTGRVSILVATDLASRGLDFPDVDLVINYDVPRRPSWSDSAKAYIHRVGRTARAGR 353
Query: 471 LGRCFTLLHKDEVKRFKKLLQKADNDSCP 499
GR T + V R K ++ A N+ P
Sbjct: 354 HGRAITFVTPYSVTRLKA-IESALNERIP 381
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 184/429 (42%), Gaps = 115/429 (26%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
IAE F A+ + L + VG
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLVGGI 127
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
YLV+DE DRLL E ++ L +L+
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILE------------------------------------ 190
Query: 299 KDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
PR K L SAT+T+ KL + L +P+ + ++Y + L+ +K
Sbjct: 191 ---EIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKY 246
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGAL 303
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L
Sbjct: 304 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISL 363
Query: 478 LHKDEVKRF 486
+++ E++ +
Sbjct: 364 VNQYELEWY 372
>gi|256272311|gb|EEU07295.1| Drs1p [Saccharomyces cerevisiae JAY291]
Length = 751
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 195/455 (42%), Gaps = 125/455 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 240 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 294
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV
Sbjct: 295 KPAKIASTRVIVLLPTRELAIQV------------------------------------- 317
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV IA V G++ GLAVG ++ + L RP D
Sbjct: 318 --ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP---------------------D 354
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 355 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN--- 411
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
++ SAT+ L L L P+ +
Sbjct: 412 -----------------------------------LLFSATMNSKIKSLVSLSLKKPVRI 436
Query: 334 TTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVES 383
P + + KL E LKP L L++ L G+++ +VF + E+
Sbjct: 437 MID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKET 490
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ +
Sbjct: 491 AHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 547
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 548 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 582
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 199/466 (42%), Gaps = 107/466 (22%)
Query: 46 MGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRAL 105
M S P+Q E I L +D+ + TGSGKT ++A+PI+Q+L A L
Sbjct: 1 MKFSKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWE-AQTPYFGL 55
Query: 106 VVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAP 165
V+ P R+LA Q+ K+ F A+
Sbjct: 56 VLAPARELAYQI---------------------------------------KETFDALGS 76
Query: 166 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 225
+G+ VG + D+ +L+++P I++ATPGR+MDH
Sbjct: 77 TMGVRTVCLVGGMDMMDQARDLMRKPH---------------------IIIATPGRIMDH 115
Query: 226 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 285
+ T+GF+L+ L Y V+DE D+LL + L +L+ S +T+L
Sbjct: 116 LEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIPSKR-------TTYL------ 162
Query: 286 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPER 345
SAT+T KL + LH+P+ + ++Y+ +
Sbjct: 163 -------------------------FSATMTNKIEKLQRASLHNPVRVAV-SSKYQTADN 196
Query: 346 LESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 405
L ++ K YL+ LL + I+F + T R L G + +
Sbjct: 197 LIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPL---H 253
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
G Q+ R +L F+ G +L+++D RG+D+ V+ V+NYD P K Y+HR GRT
Sbjct: 254 GDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRT 313
Query: 466 ARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 511
ARAG+ G+ +L+ + +++ + ++ Q S P +++++L
Sbjct: 314 ARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDAL 359
>gi|330794252|ref|XP_003285194.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
gi|325084915|gb|EGC38333.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
Length = 434
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 191/432 (44%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +ETI L RD+ + TGSGKT ++ +P++Q L + + + L + PTR+LA Q
Sbjct: 36 IQRETIPWALKGRDIIGLAQTGSGKTGAFVIPVLQKLLEQP-QGIFCLCIAPTRELAFQ- 93
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
IAE F A+ +G+ + VG
Sbjct: 94 --------------------IAEQ------------------FNALGATIGVKTCVLVGG 115
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ +L K+P I++ +PGR++ H+ T+GF L +
Sbjct: 116 IDSMTQSLQLAKKPH---------------------IIIGSPGRIIFHLENTKGFNLRSI 154
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
Y ++DE DRL ++ + +L++ + +TFL
Sbjct: 155 KYFIMDEADRLFGADFEEEVNNILKVIPKER-------NTFL------------------ 189
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L +P+ + T+Y+ + L L K
Sbjct: 190 -------------FSATMTSKVAKLQRASLVNPVKIQVA-TKYQTVDTLIQQYLFIPFKY 235
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV +L L I+FTS+ S++++ +L + G I I +G Q+ R +L
Sbjct: 236 KECYLVYILNELAGNLTIIFTSTCASSNKVTLMLRNLGLAAIPI---NGDMDQAKRLASL 292
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F++G +LV++D RG+D+ V+ V+NYD P K YIHR GRTARAG GR TL
Sbjct: 293 SKFKQGTKSILVATDVAARGLDIPMVDLVINYDVPTNSKEYIHRVGRTARAGNSGRAITL 352
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 353 VTQYDVEMYQRI 364
>gi|349579719|dbj|GAA24880.1| K7_Drs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 756
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 195/455 (42%), Gaps = 125/455 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 245 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 299
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV
Sbjct: 300 KPAKIASTRVIVLLPTRELAIQV------------------------------------- 322
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV IA V G++ GLAVG ++ + L RP D
Sbjct: 323 --ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP---------------------D 359
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 360 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN--- 416
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
++ SAT+ L L L P+ +
Sbjct: 417 -----------------------------------LLFSATMNSKIKSLVSLSLKKPVRI 441
Query: 334 TTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVES 383
P + + KL E LKP L L++ L G+++ +VF + E+
Sbjct: 442 MID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKET 495
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ +
Sbjct: 496 AHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 552
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 553 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 587
>gi|171656|gb|AAA34666.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
Length = 722
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 197/463 (42%), Gaps = 125/463 (26%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
+ L P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +
Sbjct: 203 FNSLSLSRPVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMI 257
Query: 89 PIVQTLSNRAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
PI++ L + + R +V+LPTR+LA+QV
Sbjct: 258 PIIERLLYKPAKIASTRVIVLLPTRELAIQV----------------------------- 288
Query: 147 SLLFISLPQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 205
DV IA V G++ GLAVG ++ + L RP
Sbjct: 289 ----------ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP-------------- 324
Query: 206 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
DI++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L
Sbjct: 325 -------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLP 377
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
S+ +N ++ SAT+ L L
Sbjct: 378 SNRQN--------------------------------------LLFSATMNSKIKSLVSL 399
Query: 326 DLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCI 375
L P+ + P + + KL E LKP L L++ L G+++ +
Sbjct: 400 SLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIV 453
Query: 376 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 435
VF + E+ HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +
Sbjct: 454 VFVARKETAHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLAS 510
Query: 436 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
RG+D+ + V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 511 RGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 553
>gi|259147982|emb|CAY81231.1| Drs1p [Saccharomyces cerevisiae EC1118]
Length = 754
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 195/455 (42%), Gaps = 125/455 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 243 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 297
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV
Sbjct: 298 KPAKIASTRVIVLLPTRELAIQV------------------------------------- 320
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV IA V G++ GLAVG ++ + L RP D
Sbjct: 321 --ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP---------------------D 357
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 358 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN--- 414
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
++ SAT+ L L L P+ +
Sbjct: 415 -----------------------------------LLFSATMNSKIKSLVSLSLKKPVRI 439
Query: 334 TTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVES 383
P + + KL E LKP L L++ L G+++ +VF + E+
Sbjct: 440 MID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKET 493
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ +
Sbjct: 494 AHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 550
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 551 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 585
>gi|70996614|ref|XP_753062.1| DEAD/DEAH box helicase [Aspergillus fumigatus Af293]
gi|66850697|gb|EAL91024.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus Af293]
Length = 856
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 188/425 (44%), Gaps = 118/425 (27%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
EE +K + LP W+ +PV + L L+V L++ G F VQ
Sbjct: 225 EETEKPNYSSLPAWLANPVREPASKRARFSELGINSNLLRV-LEDHGYKEAFAVQ----- 278
Query: 61 ETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
T+ P L + DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L
Sbjct: 279 STVIPLLLQGLRRHPGDLCISAATGSGKTLSYVLPLVTALKPTPAPRMRGLIVVPTRELV 338
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
Q A C+ C A GL +G A
Sbjct: 339 KQAREA-CELC--------------------------------------ATGSGLRIGSA 359
Query: 175 VGQSSIADEISELIK-----RPKL------------------------EAGICYDP-EDV 204
VG +I DE L++ P+L EAG +P
Sbjct: 360 VGNVAIKDEQRTLMRVDQCYGPELSKQRQTVDLTGEDWTNFSLMNYLAEAGELSEPLPGY 419
Query: 205 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 264
+Q + +DIL+ TPGRL+DH+ T+GFTLEHL +LV+DE DRLL E++Q W+ V+
Sbjct: 420 VQRAEPNIDILICTPGRLVDHLRYTKGFTLEHLQWLVIDEADRLLNESFQEWVDVVMN-- 477
Query: 265 RSDNENRFSDASTFLPSAFGSL-KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 323
S + P FGS K + G+ ++ PR K++LSAT+T+D +KL
Sbjct: 478 --------SLDARKAPKTFGSSGKFMAELGLPIQSRE---PR--KVILSATMTRDISKLN 524
Query: 324 QLDLHHPLFL-------------------TTGETRYKLPERLESYKL-ICESKLKPLYLV 363
L L +P + TT + ++ LP L+ Y + + + KPLYL+
Sbjct: 525 SLRLANPKLVIIGSAEPTATEEAEHDGVPTTSDEQFTLPSTLKEYSVSVGDGSQKPLYLL 584
Query: 364 ALLQS 368
LLQS
Sbjct: 585 QLLQS 589
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 374 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S ES RL L++ L ++ + S KTL A+R GKI ++V++D
Sbjct: 692 VLIFTKSSESASRLSRLISLLDPSLADRVGTIIKSNKSSASRKTLTAYRRGKISIIVATD 751
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
+RG+D+ + +VVNYD P + TY+HR GRTARAG+ G +TL+ E + F + K
Sbjct: 752 RASRGLDLVSLTHVVNYDVPPSVTTYVHRVGRTARAGKEGSAWTLVAHREGRWFVNEISK 811
Query: 493 ADN 495
+
Sbjct: 812 GSD 814
>gi|323303947|gb|EGA57727.1| Drs1p [Saccharomyces cerevisiae FostersB]
Length = 755
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 195/455 (42%), Gaps = 125/455 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 244 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 298
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV
Sbjct: 299 KPAKIASTRVIVLLPTRELAIQV------------------------------------- 321
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV IA V G++ GLAVG ++ + L RP D
Sbjct: 322 --ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP---------------------D 358
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 359 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN--- 415
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
++ SAT+ L L L P+ +
Sbjct: 416 -----------------------------------LLFSATMNSKIKSLVSLSLKKPVRI 440
Query: 334 TTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVES 383
P + + KL E LKP L L++ L G+++ +VF + E+
Sbjct: 441 MID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKET 494
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ +
Sbjct: 495 AHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 551
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 552 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 586
>gi|167379929|ref|XP_001735325.1| ATP-dependent RNA helicase DBP6 [Entamoeba dispar SAW760]
gi|165902737|gb|EDR28474.1| ATP-dependent RNA helicase DBP6, putative [Entamoeba dispar SAW760]
Length = 502
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 213/484 (44%), Gaps = 105/484 (21%)
Query: 47 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 106
GI L+P+Q V Q + D+ + +PTGSGKTL+Y LP+++ L N ++ +V
Sbjct: 86 GIKELYPMQKIVQQFIFTT---DTDIAVRAPTGSGKTLAYTLPLLK-LINPLFNHIQTVV 141
Query: 107 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 166
++PT L LQV++ + P +K + +
Sbjct: 142 LIPTLPLVLQVSN-------------------------------VMKPLLKTINCNLT-- 168
Query: 167 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 226
++G+SSI E S C ++V TP RL++H+
Sbjct: 169 -------SLGESSIEKETS------------CNS------------HVIVTTPIRLLNHL 197
Query: 227 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 286
+ + L+ L YL+ DETD+LL +P + L + S P +
Sbjct: 198 SKS-TLDLKWLKYLIYDETDKLLT------IPALFPLLNMIKKQYIS------PQYMVDI 244
Query: 287 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-----------T 335
KT + V + + ++ SATL+ P QL ++ PL LT
Sbjct: 245 KTGKSLNVFSSSTN----QFRSLLFSATLSSSPKAFKQLQMNKPLLLTFDDSFVRDINEI 300
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+T+Y LP +E+ K L ++ LL++ G K I+F +S + L L+
Sbjct: 301 TQTKYVLPSTIENRYTPVLPVEKDLVVLELLKTSG--KSIIFCNSNNTAFVLFRLIQEMA 358
Query: 396 ELRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
E K K+ G +Q + K +K I V V++D M+RG+D++ + V+N+D
Sbjct: 359 EFIGKNKKEIGCIISSMKQKEKLKVIKKVENDSIDVFVTTDLMSRGIDIKRLKTVINFDC 418
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESL 511
P + Y+HRAGRT RAG G C T++ +EV K L+K +N+ +H +P + ESL
Sbjct: 419 PVSTQLYVHRAGRTGRAGNEGICHTIVLTNEVGNLKSYLKKMNNE---LHKVPVIVEESL 475
Query: 512 RPVY 515
Y
Sbjct: 476 TKSY 479
>gi|401400548|ref|XP_003880804.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
gi|325115216|emb|CBZ50771.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
Length = 462
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 187/433 (43%), Gaps = 101/433 (23%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ E + L RD+ + TGSGKT ++ LPI+Q L R R AL++ PTR+L LQ
Sbjct: 58 AIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQQLLQRTQR-FYALILAPTRELCLQ 116
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
++ A+ ++G++V VG
Sbjct: 117 ISQQ---------------------------------------MLAMGGSLGVTVVTLVG 137
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ L K+P ++V +PGR++DH+ T+GF+L+
Sbjct: 138 GLDHNTQAIALAKKP---------------------HVVVGSPGRVVDHLQQTKGFSLKS 176
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
+ LV+DE DRLL + A L +L+ S E +
Sbjct: 177 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQ------------------------- 211
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
M+ SAT+T +KL + L P+ L ++Y + L+ + L+ K
Sbjct: 212 -----------TMLFSATMTTKVSKLQKASLKKPVKLEV-NSKYDVASLLQQHFLLVPFK 259
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
LK +L A L L IVFT++ + + L H G + + G Q R
Sbjct: 260 LKHTHLAAALLHLSPSSVIVFTNTCANARTIALFLRHLGFQSVCLH---GKMTQPQRIGA 316
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L FR + LV+++ +RG+D+ V V+N+D P K YIHR GRTARAG+ GR T
Sbjct: 317 LTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALT 376
Query: 477 LLHKDEVKRFKKL 489
++ + +V+ ++++
Sbjct: 377 IVTQYDVEAYQRI 389
>gi|414886235|tpg|DAA62249.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 770
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 205/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 176 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 231
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA QV HS+ E QF +
Sbjct: 232 PAIRVLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC-------- 265
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L VG G S+ E++ L+S DI+VATP
Sbjct: 266 ---------LIVG---GLSTKVQEVA----------------------LRSMPDIVVATP 291
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L +++DE DRLL + A + +
Sbjct: 292 GRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL------------------- 332
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ ++L +L L+ P+ L +
Sbjct: 333 ---------IRMC---------PKRRQT-MLFSATMTEEIDELIKLSLNKPVRLEADPSL 373
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + ES + + L L++ + I+F+ + +S HRL + FG
Sbjct: 374 KRPATLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGL 429
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ FR+ ++ L+++D RG+D+ GV V+N+ P +K
Sbjct: 430 SGMKAAELHGNLTQAQRLEALELFRKQEVDFLIATDVAARGIDIVGVQTVINFACPRDVK 489
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 490 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 526
>gi|392297967|gb|EIW09066.1| Drs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 748
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 195/455 (42%), Gaps = 125/455 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 237 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 291
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV
Sbjct: 292 KPAKIASTRVIVLLPTRELAIQV------------------------------------- 314
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV IA V G++ GLAVG ++ + L RP D
Sbjct: 315 --ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP---------------------D 351
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 352 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN--- 408
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
++ SAT+ L L L P+ +
Sbjct: 409 -----------------------------------LLFSATMNSKIKSLVSLSLKKPVRI 433
Query: 334 TTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVES 383
P + + KL E LKP L L++ L G+++ +VF + E+
Sbjct: 434 MID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKET 487
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ +
Sbjct: 488 AHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 544
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 545 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 579
>gi|160380652|sp|A7A0P8.1|DRS1_YEAS7 RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|151941161|gb|EDN59539.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406035|gb|EDV09302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207343227|gb|EDZ70754.1| YLL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 754
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 195/455 (42%), Gaps = 125/455 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 243 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 297
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV
Sbjct: 298 KPAKIASTRVIVLLPTRELAIQV------------------------------------- 320
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV IA V G++ GLAVG ++ + L RP D
Sbjct: 321 --ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP---------------------D 357
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 358 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN--- 414
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
++ SAT+ L L L P+ +
Sbjct: 415 -----------------------------------LLFSATMNSKIKSLVSLSLKKPVRI 439
Query: 334 TTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVES 383
P + + KL E LKP L L++ L G+++ +VF + E+
Sbjct: 440 MID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKET 493
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ +
Sbjct: 494 AHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 550
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 551 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 585
>gi|6323021|ref|NP_013093.1| Drs1p [Saccharomyces cerevisiae S288c]
gi|1706521|sp|P32892.2|DRS1_YEAST RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|1360171|emb|CAA97452.1| DRS1 [Saccharomyces cerevisiae]
gi|1495215|emb|CAA62783.1| L1345/DRS1 protein [Saccharomyces cerevisiae]
gi|285813414|tpg|DAA09310.1| TPA: Drs1p [Saccharomyces cerevisiae S288c]
Length = 752
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 195/455 (42%), Gaps = 125/455 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 241 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 295
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LA+QV
Sbjct: 296 KPAKIASTRVIVLLPTRELAIQV------------------------------------- 318
Query: 155 QVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
DV IA V G++ GLAVG ++ + L RP D
Sbjct: 319 --ADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP---------------------D 355
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S+ +N
Sbjct: 356 IVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQN--- 412
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
++ SAT+ L L L P+ +
Sbjct: 413 -----------------------------------LLFSATMNSKIKSLVSLSLKKPVRI 437
Query: 334 TTGETRYKLPERLESYKLICE-------SKLKPLYLVALLQSL---GEEKCIVFTSSVES 383
P + + KL E LKP L L++ L G+++ +VF + E+
Sbjct: 438 MID------PPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKET 491
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL ++ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ +
Sbjct: 492 AHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 548
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
V+NYD P + Y+HR GRTARAG+ GR T +
Sbjct: 549 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFV 583
>gi|326504546|dbj|BAJ91105.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508600|dbj|BAJ95822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 456
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 180/422 (42%), Gaps = 103/422 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RD+ TGSGKT ++ALPI+Q L + A V+ PTR+LA+Q
Sbjct: 64 RDVIGLGQTGSGKTGAFALPIIQALLEHR-QPFFACVMSPTRELAIQ------------- 109
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
IAE F A+ +GL + VG ++ + K
Sbjct: 110 --------IAEQ------------------FEALGSGIGLVCSVLVGGVDRMQQVLSIAK 143
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
RP I+V TPGRL+DH+ T+GF+L + YLV+DE D+LL
Sbjct: 144 RPH---------------------IVVGTPGRLLDHLKDTKGFSLTKVKYLVLDEADKLL 182
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
++ L +L K+ P R
Sbjct: 183 NLEFKESLDDIL-------------------------------------KEIPKERRT-Y 204
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
+ SAT+T+ +KL + L +P+ + ++Y + L+ + K YLV +L L
Sbjct: 205 LFSATMTKKVSKLQRACLRNPVKVEV-SSKYSTVDTLKQEWYFVPADYKDCYLVHVLNEL 263
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
++F + EST L L + G K SG Q R L F+ +L+
Sbjct: 264 QGSMIMIFVRTCESTRLLALTLRNLG---FKALSISGQMSQDKRLGALNKFKAKDFNILI 320
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+D +RG+D++GV+ V+NYD P K Y+HR GRTARAGQ G + +++ E + FK +
Sbjct: 321 CTDVASRGLDIQGVDVVMNYDIPMNSKDYVHRVGRTARAGQSGYAVSFVNQYEAEWFKLI 380
Query: 490 LQ 491
Q
Sbjct: 381 EQ 382
>gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]
Length = 679
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 212/487 (43%), Gaps = 125/487 (25%)
Query: 47 GISSLFPVQVAVWQETIGP-GLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
+SSL ++ V Q + P L +D+C +S TGSGKT ++ALPI++ L R V R
Sbjct: 127 AVSSLGFIKPTVIQSMVIPVALQGKDVCASSRTGSGKTAAFALPILERLLYRPRRVAATR 186
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF-DSLLFISLPQVKDVFAA 162
LV+ PTR+LA+Q H++ E F D +I + VK+
Sbjct: 187 VLVLTPTRELAVQA------------------HAMMEKLAAFTDIRCYIVIGGVKNQL-- 226
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
+ +EL K+P D++VATPGR+
Sbjct: 227 --------------------QETELRKKP---------------------DVVVATPGRM 245
Query: 223 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 282
+DH+ G E L LV+DE DRLL + + ++++
Sbjct: 246 IDHLRNAPGIGFEALEILVLDEADRLLEMGFTEEVQELVKM------------------- 286
Query: 283 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT------TG 336
C P R M+ SAT+T D +KLA L P+ +T T
Sbjct: 287 ---------C---------PQQRQT-MLFSATMTHDVDKLAAFSLRRPVRVTADGSIRTD 327
Query: 337 ETRYKLPERLESYKLICE--------SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 388
ET+ L + L+ E K + L+ L ++ IVF HRL
Sbjct: 328 ETQGTLNKVAVPSSLLQEFVRIRKEHEKDREAILLCLCTRTFHKRTIVFCREKRRAHRLR 387
Query: 389 TLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 448
+ FG L ++++E G Q+ R + L+ F+E K L+++D RG+D++GV+ VVN
Sbjct: 388 II---FGLLGLRVEELHGNLTQAQRLEALENFKEEKSDFLLATDLAGRGLDIKGVDVVVN 444
Query: 449 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ---KADNDSCPIHSIPS 505
+ P + Y+HR GRTARAG+ GR TL D+ +R K +L+ ++ D +P
Sbjct: 445 LEVPRNLAEYVHRVGRTARAGRKGRAVTLA--DDSQRTKSMLKEVVRSAPDVVKRRVVPP 502
Query: 506 SLIESLR 512
I ++R
Sbjct: 503 DAIAAMR 509
>gi|225561306|gb|EEH09586.1| ATP-dependent RNA helicase DBP6 [Ajellomyces capsulatus G186AR]
Length = 843
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 167/360 (46%), Gaps = 92/360 (25%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 131
LCI++ TGSGKTL+YALP+V + + LR LVV+PTR+L Q A C+ C
Sbjct: 286 LCISAATGSGKTLAYALPLVAGIEQSSYPRLRGLVVVPTRELVWQAREA-CELC------ 338
Query: 132 LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 191
A GL +G AVG +S+ +E + LIK
Sbjct: 339 --------------------------------ATGTGLRIGTAVGTASLNEEQASLIKHE 366
Query: 192 KL----------------EAGICYDPEDVLQELQS--------------AVDILVATPGR 221
+L ++ ++ ++ + E +S +VDIL+ TPGR
Sbjct: 367 QLYSPCTDQIKNIQQMSADSWTSFNIQEYISEAESSPSAFPNHVAIPSPSVDILICTPGR 426
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V+ + NR
Sbjct: 427 LVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVVIPAL---DRNRID-------- 475
Query: 282 AFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+ GV E G+K PRL K++LSAT+T+D +KL L L +P + + + R
Sbjct: 476 -----VNAKSGGVLQELGWKTC-KPRLQKIILSATMTRDISKLQALRLRNPKLVVSDDPR 529
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 415
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
TL A+R GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAYRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 476 TLLHKDEVKRF 486
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 189/438 (43%), Gaps = 103/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+P + ++I L +D+ + TGSGKT ++ALP++Q L + R LV+ PTR
Sbjct: 57 WPAASPIQIQSIPHALNGKDVIGLAQTGSGKTGAFALPVLQDLLHEP-RAFHTLVLSPTR 115
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ + F + +G+
Sbjct: 116 ELA---------------------------------------SQIAEQFECLGKDIGVKC 136
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + ++ KRP +LV TPGR++DH+ T+G
Sbjct: 137 AVLVGGMDMTSQSLQIGKRPH---------------------VLVGTPGRVVDHLENTKG 175
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L L++DE DRLL ++ + T+L++
Sbjct: 176 FSLRQLKVLILDEADRLLNLDFEEEIDTILKVI--------------------------- 208
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
P R ++ SAT+T NKL + L P+ + ++Y + L+ L
Sbjct: 209 ----------PRERRTQL-FSATMTSKVNKLQRACLRDPVKVEVA-SKYSTVKSLKQNYL 256
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
+K K Y LL L ++FT + E T +L + + G I I G Q
Sbjct: 257 FVPAKHKECYACYLLNELSASTIMMFTRTCEQTRKLALVARNLGFSAIPI---HGQMSQP 313
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R L F+ G+ +LV++D +RG+D+ V+ V+N+D P K Y+HR GRTARAG+
Sbjct: 314 KRQGALNKFKGGERNILVATDVASRGLDIPSVDVVINFDVPMNSKDYVHRVGRTARAGRS 373
Query: 472 GRCFTLLHKDEVKRFKKL 489
G TL+ + +V+ ++K+
Sbjct: 374 GLAITLVTQYDVELYQKI 391
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 187/437 (42%), Gaps = 104/437 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA--VRCLRALVVLPTRDLAL 115
+ +ETI L RDL + TGSGKT ++A+PI+Q L + A + A V+ PTR
Sbjct: 55 IQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKSTWACVLAPTR---- 110
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
E+CVQ + F + ++ L+ V
Sbjct: 111 ------------------------ELCVQ-----------IGQQFEGLGASINLTTATIV 135
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + + L K+P I+VA+PGRL+DH+ T+GF L+
Sbjct: 136 GGLDMVTQAMALSKKPH---------------------IIVASPGRLVDHLENTKGFHLK 174
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
+ +LV+DE DRLL ++ L ++Q D + TFL
Sbjct: 175 TIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQ-------TFL---------------- 211
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T ++L + L P+ ++ + + L +
Sbjct: 212 ---------------FSATMTNKVSQLQRASLTRPVKCEVAR-KFDVAKGLVQNYMFVPH 255
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YL ALL ++F + + R+ T L H G + + G Q+ R
Sbjct: 256 KHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCL---HGKMTQTHRLG 312
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L FR G VLV++D RG+D+ V+ V+N+D P + YIHR GRTARAG+ GR
Sbjct: 313 ALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTARAGRTGRSV 372
Query: 476 TLLHKDEVKRFKKLLQK 492
TL+ + +++ F+++ K
Sbjct: 373 TLVTQYDIEPFQRIENK 389
>gi|357152627|ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 1
[Brachypodium distachyon]
Length = 780
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 206/457 (45%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 189 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 244
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA QV HS+ E QF
Sbjct: 245 PAIRVLILTPTRELAAQV------------------HSMIEKLAQF-------------- 272
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ L VG G+ ++V L+S DI+VATP
Sbjct: 273 -------TDIRCCLIVG-------------------GLPTKVQEVA--LRSNPDIVVATP 304
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L L++DE DRLL + + NE
Sbjct: 305 GRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSVEI----------NE---------- 344
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ ++L +L L+ P+ L +
Sbjct: 345 --------LIRMC---------PKRRQT-MLFSATMTEEIDELVKLSLNKPVRLEADPSL 386
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + E+ + + L L++ +E+ I+F+ + S HRL + FG
Sbjct: 387 KRPATLTEEVVRIRRSREANQEAVLLALCLKTF-KERVIIFSGTKHSAHRLKIM---FGL 442
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ +L+++D RG+D+ GV V+N+ P +K
Sbjct: 443 SGMKAAELHGNLTQAQRLEALELFKKQEVDILIATDIAARGIDIVGVRTVINFACPRDVK 502
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 503 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 539
>gi|353241604|emb|CCA73408.1| probable DEAD box protein (putative RNA helicase) [Piriformospora
indica DSM 11827]
Length = 458
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 198/459 (43%), Gaps = 108/459 (23%)
Query: 26 DCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLS 85
+ P + L L P L ++ +G + +Q + I L +RD+ + TGSGKT +
Sbjct: 30 ETPFNTL-GLIPELLQTVEALGYKNATSIQA----QAIPSALQDRDIIGVAKTGSGKTAA 84
Query: 86 YALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 145
+ALPI+Q + L A ++ PTR+LA Q+
Sbjct: 85 FALPILQKWWEDP-KPLYACILAPTRELAYQIQKQ------------------------- 118
Query: 146 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 205
F A+ +G+ VG I + L KRP
Sbjct: 119 --------------FEALGANLGVRCCCIVGGLDIMAQKVALAKRPH------------- 151
Query: 206 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
I+VATPGRL DH+ T+GF+L L YLV+DE DRLL + + +L++
Sbjct: 152 --------IVVATPGRLQDHLENTKGFSLRSLKYLVLDEADRLLDMDFGPIIDKILKVIP 203
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
+ RR M+ SAT++ +L +
Sbjct: 204 KE----------------------RRT----------------MLFSATMSTKVKRLQRA 225
Query: 326 DLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
L +P+ + ++Y L+ Y + K + ++ L++SL + IVFT++V T
Sbjct: 226 SLVNPVKVEV-SSKYSTVSTLQQYYVFGPHMRKEVNMITLVRSLSGKSIIVFTNTVNDTI 284
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
RL +L I + +S L QS R +L FR G QVL+++D RG+D+ V+
Sbjct: 285 RLTLMLRALNIGAIPL--HSKLS-QSTRLGSLNKFRAGGRQVLIATDVAARGLDIPQVDV 341
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
V+NY P K YIHR GRTARAG+ G+ T + + +++
Sbjct: 342 VINYGVPQNSKDYIHRVGRTARAGRAGKAITFVTQYDIE 380
>gi|403415272|emb|CCM01972.1| predicted protein [Fibroporia radiculosa]
Length = 782
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 205/473 (43%), Gaps = 118/473 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---- 97
++ +G + P+Q A TI L +D+ N+ TGSGKT ++ +P+++ L R
Sbjct: 207 SITALGFNKPTPIQAA----TIPVALLGKDIVGNAVTGSGKTAAFIIPMLERLLYRDRGK 262
Query: 98 ---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A RCL V++PTR+L +Q C + +A H+
Sbjct: 263 KAAATRCL---VLVPTRELGVQ---------CFEVGTKLAAHT----------------- 293
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ L VG S+ + + L RP D+
Sbjct: 294 -------------DIRFSLVVGGLSVKTQEATLRTRP---------------------DV 319
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRL+DH+ + FTL+ L LV+DE DR+L + + L +
Sbjct: 320 VIATPGRLIDHLRNSPAFTLDALDILVLDEADRMLSDGFADELTEI-------------- 365
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
I+ C P R M+ SAT+T ++L ++ L P+ L
Sbjct: 366 --------------IKSC---------PMSRQT-MLFSATMTDSVDELVRMSLDKPVRLF 401
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
R ++ + + K + LV L + + + I+F S + H++ +
Sbjct: 402 VDPKRSTASGLVQEFVRVRAGKESERSALLVTLCKRTFKSRAIIFFRSKKLAHQMRIV-- 459
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
F L +K E G Q R K L+ FR+G + L+++D +RG+D++G+ V+NYD P
Sbjct: 460 -FRLLDMKADELHGDLSQEQRLKALQQFRDGAVDFLMATDLASRGLDIKGIETVINYDMP 518
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA-DNDSCPIHSIP 504
+ + Y+HR GRTARAG+ GR TL+ + + K K ++ A DS IP
Sbjct: 519 SQLAQYLHRVGRTARAGKKGRSVTLVGEADRKMLKASIKHAMAEDSVRHRQIP 571
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 194/431 (45%), Gaps = 104/431 (24%)
Query: 60 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
QE P L +D+ + TGSGKT +++LPI+Q L ++ AL++ PTR+LA+Q
Sbjct: 44 QEQAIPHLLAGQDVIGLAQTGSGKTGAFSLPILQALMDKPQEHF-ALILSPTRELAIQ-- 100
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
IAE QV+ A+ +G+ + VG
Sbjct: 101 -------------------IAE--------------QVE----ALGSGIGVKSCVLVGGI 123
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
+ + L KRP +LV TPGR++DH++ T+GF+L+ L
Sbjct: 124 DMMAQAIALAKRPH---------------------VLVGTPGRVVDHLSNTKGFSLKQLK 162
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
+LV+DE D+LL ++ + +L++
Sbjct: 163 HLVLDEADKLLDMDFEQEIDQILKVI---------------------------------- 188
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
P R ++ SAT+T KL + L P+ + +Y + L + +K K
Sbjct: 189 ---PRERRTQL-FSATMTNKVQKLQRACLDKPVKIEVAH-KYSTVDTLRQQYVFIPAKYK 243
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
YL ++ L ++FT + EST R+ LL + G + I G Q R L
Sbjct: 244 DCYLAYVINELSGSTFMIFTRTCESTRRIALLLRNLGFGAVPI---HGHMSQPKRLGALN 300
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F+ G+ +LV++D +RG+D+ V+ V+N+D P K Y+HR GRTARAG+ GR T++
Sbjct: 301 KFKSGERNILVATDVASRGLDIPSVDVVINFDVPQNSKDYVHRVGRTARAGRSGRSVTIV 360
Query: 479 HKDEVKRFKKL 489
+ +V+ F+K+
Sbjct: 361 TQYDVELFQKI 371
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 190/432 (43%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ ++I L +D+ + TGSGKT ++ALPI+Q L ++ + ALV+ PTR+LA+Q
Sbjct: 41 IQAQSIPQALQGKDVIGLAQTGSGKTGAFALPILQELLDKP-QAFFALVLSPTRELAIQ- 98
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
IAE F A+ +G+ + VG
Sbjct: 99 --------------------IAEQ------------------FEALGAGIGVKTAVLVGG 120
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L KRP ++V TPGR++DH+ T+GFTL+ L
Sbjct: 121 IDMMAQSIQLGKRPH---------------------VVVGTPGRVVDHLTNTKGFTLKQL 159
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
L +DE DRLL ++ + +L++ D RR
Sbjct: 160 QVLCLDEADRLLNLDFEQEIDQILKVVPRD----------------------RRT----- 192
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
+ SAT+T KL + L +P+ + +Y + L+ L +K
Sbjct: 193 -----------QLFSATMTSKVAKLQRACLRNPVKVEV-SAKYSTVDSLKQNYLFIPAKH 240
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K Y+ L L +VFT + + T +L + + G I I G Q R L
Sbjct: 241 KDCYVNYLFNELSSSTMMVFTRTCDQTRKLALVARNLGFGAIPI---HGQMSQPKRIGAL 297
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G+ +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T+
Sbjct: 298 NKFKAGERNILVATDVASRGLDIPAVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAITM 357
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++K+
Sbjct: 358 VTQYDVELYQKI 369
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 187/437 (42%), Gaps = 104/437 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA--VRCLRALVVLPTRDLAL 115
+ +ETI L RDL + TGSGKT ++A+PI+Q L + A + A V+ PTR
Sbjct: 55 IQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKLTWACVLAPTR---- 110
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
E+CVQ + F + ++ L+ V
Sbjct: 111 ------------------------ELCVQ-----------IGQQFEGLGASINLTTATIV 135
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + + L K+P I+VA+PGRL+DH+ T+GF L+
Sbjct: 136 GGLDMVTQAMSLSKKPH---------------------IIVASPGRLVDHLENTKGFHLK 174
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
+ +LV+DE DRLL ++ L ++Q D + TFL
Sbjct: 175 TIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQ-------TFL---------------- 211
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T ++L + L P+ ++ + + L +
Sbjct: 212 ---------------FSATMTNKVSQLQRASLTRPVKCEVAR-KFDVAKGLVQNYMFVPH 255
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YL ALL ++F + + R+ T L H G + + G Q+ R
Sbjct: 256 KHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCL---HGKMTQTHRLG 312
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
L FR G VLV++D RG+D+ V+ V+N+D P + YIHR GRTARAG+ GR
Sbjct: 313 ALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTARAGRTGRSV 372
Query: 476 TLLHKDEVKRFKKLLQK 492
TL+ + +++ F+++ K
Sbjct: 373 TLVTQYDIEPFQRIENK 389
>gi|189208750|ref|XP_001940708.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976801|gb|EDU43427.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 805
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 211/483 (43%), Gaps = 109/483 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L ++G + P+Q + + + +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 289 GLASVGFTEPTPIQ----NKAVPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRPKKV 344
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R + +PTR+LA+Q C N+ A F + F
Sbjct: 345 PTTRVAIFMPTRELAVQ---------CFNV---------ATKLASFTDITF--------- 377
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L G S D+ + L RP D+++ATP
Sbjct: 378 ------------ALMAGGFSTRDQEAVLKTRP---------------------DVVIATP 404
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH++ T F +EHL LV+DE DR+L E +++ L +L T +
Sbjct: 405 GRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEIL---------------TTI 449
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ + P+ L +
Sbjct: 450 PKSRQT-----------------------MLFSATMTSSVDKLIRIGMDKPVRLMVDAKK 486
Query: 340 YKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + + + + + K YL+ + + + EK IVF + HR+ + G
Sbjct: 487 HTVAGLTQEFVRLRQGKEDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCG-- 544
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R ++++AFR GK L+++D +RG+D++ V+ V+NY+ P +
Sbjct: 545 -LKASELHGNMSQEQRIQSVEAFRSGKSAYLLATDVASRGLDIKNVSTVINYEAPQSHEI 603
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
Y+HR GRTARAG+ GR TL + + K K+ ++ + + + S + E+ R + K
Sbjct: 604 YLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVKASRDQGAKVVSRQVPIEETDRWMKKI 663
Query: 518 GDV 520
D+
Sbjct: 664 KDL 666
>gi|330915742|ref|XP_003297149.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
gi|311330325|gb|EFQ94748.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
Length = 805
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 211/483 (43%), Gaps = 109/483 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L ++G + P+Q + + + +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 289 GLASVGFTEPTPIQ----NKAVPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRPKKV 344
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R + +PTR+LA+Q C N+ A F + F
Sbjct: 345 PTTRVAIFMPTRELAVQ---------CFNV---------ATKLASFTDITF--------- 377
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L G S D+ + L RP D+++ATP
Sbjct: 378 ------------ALMAGGFSTRDQEAVLKTRP---------------------DVVIATP 404
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH++ T F +EHL LV+DE DR+L E +++ L +L T +
Sbjct: 405 GRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEIL---------------TTI 449
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ + P+ L +
Sbjct: 450 PKSRQT-----------------------MLFSATMTSSVDKLIRIGMDKPVRLMVDAKK 486
Query: 340 YKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + + + + + K YL+ + + + EK IVF + HR+ + G
Sbjct: 487 HTVAGLTQEFVRLRQGKEDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCG-- 544
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R ++++AFR GK L+++D +RG+D++ V+ V+NY+ P +
Sbjct: 545 -LKASELHGNMSQEQRIQSVEAFRSGKSAYLLATDVASRGLDIKNVSTVINYEAPQSHEI 603
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 517
Y+HR GRTARAG+ GR TL + + K K+ ++ + + + S + E+ R + K
Sbjct: 604 YLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVKASRDQGAKVVSRQVPIEETDRWMKKI 663
Query: 518 GDV 520
D+
Sbjct: 664 KDL 666
>gi|340518289|gb|EGR48530.1| predicted protein [Trichoderma reesei QM6a]
Length = 787
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 207/464 (44%), Gaps = 117/464 (25%)
Query: 19 VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
VDVS F+ L P L+ + +G + P+Q +TI L +DL + T
Sbjct: 248 VDVSSFQAMSLSR-----PILR-GITTVGFTKPTPIQA----KTIPIALMGKDLVGGAVT 297
Query: 79 GSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
GSGKT ++ LPI++ L R + R +++ PTR+LA+Q C H
Sbjct: 298 GSGKTAAFVLPILERLLYRPKKIPTTRVVILTPTRELAIQ---------C---------H 339
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
++A + F LAVG S+ + EL RP
Sbjct: 340 AVATKLAAHTDIKFT---------------------LAVGGLSLKAQEVELRLRP----- 373
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
D+++ATPGR +DH+ + F+++ + LV+DE DR+L + +
Sbjct: 374 ----------------DVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADE 417
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
L +L T LP + + M+ SAT+T
Sbjct: 418 LNEIL---------------TTLPKSRQT-----------------------MLFSATMT 439
Query: 317 QDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 373
++L ++ L+ P+ + + +T L + + E K + YLV + ++L E+
Sbjct: 440 STVDRLIKVGLNKPVRVMVDSQKKTAGTLTQEFVRLRPGREEK-RMGYLVHICKNLYTER 498
Query: 374 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
I+F + HR + FG L E G Q+ R ++++FR+GK+ L+++D
Sbjct: 499 VIIFFRQKKDAHRARII---FGLLGFSCAELHGSMNQTQRIASVESFRDGKVNYLLATDL 555
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
+RG+D++GV+ V+NY+ P ++ Y+HR GRTARAG+ G TL
Sbjct: 556 ASRGLDIKGVDTVINYEAPQSVEIYVHRVGRTARAGRAGTSVTL 599
>gi|407035126|gb|EKE37546.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 500
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 213/486 (43%), Gaps = 103/486 (21%)
Query: 47 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 106
GI L+P+Q V Q + D+ + +PTGSGKTL+Y LP+++ L N ++ ++
Sbjct: 84 GIKELYPMQKIVQQFIFST---DTDIAVRAPTGSGKTLAYTLPLLK-LINPLFNHIQVVI 139
Query: 107 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 166
++PT LAL QV +V +
Sbjct: 140 LIPTLPLAL---------------------------------------QVSNVMKPLLKT 160
Query: 167 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 226
+ ++ + +G+SSI E S C ++V TP RL++H+
Sbjct: 161 INCNL-VCLGESSIEKETS------------CNS------------HVIVTTPIRLLNHL 195
Query: 227 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 286
+ + L+ L YL+ DETD+LL +P + L + S P +
Sbjct: 196 SKS-TLDLKWLQYLIYDETDKLLT------IPALFPLLNIIKKQYIS------PQYMVDI 242
Query: 287 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-----------T 335
KT + V + + ++ SATL+ P QL ++ PL LT
Sbjct: 243 KTGKSLNVFSSSTN----QFRSLLFSATLSSSPKAFKQLQMNKPLLLTFDDSFVRDINEI 298
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+T+Y LP +E+ K L ++ LL++ G K I+F +S + L L+
Sbjct: 299 TQTKYVLPSTIENRYTPVLPIEKDLVVLELLKTSG--KSIIFCNSNNTAFVLFRLIQEMA 356
Query: 396 ELRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
E K K+ G +Q + K +K I V +++D M+RG+D++G+ V+N+D
Sbjct: 357 EFIGKEKKEIGCIISSMKQKEKLKVIKRVENDSINVFITTDVMSRGIDIKGLKTVINFDC 416
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI-PSSLIES 510
P + Y+HRAGRT RAG G C T++ +EV K L+K +N+ + I SLI+S
Sbjct: 417 PVSTQLYVHRAGRTGRAGNEGICHTIVLTNEVGNLKGYLKKMNNELHKVSVIVEESLIKS 476
Query: 511 LRPVYK 516
+ K
Sbjct: 477 YNKITK 482
>gi|380487114|emb|CCF38253.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 777
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 204/466 (43%), Gaps = 110/466 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L +G S P+Q +T+ L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 266 GLAAVGFSKPTPIQA----KTVPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKV 321
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++ PTR+LA+Q C H++A + + F
Sbjct: 322 PTSRVVILTPTRELAIQ---------C---------HAVATKLAAYTDIKFT-------- 355
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + EL RP D+++ATP
Sbjct: 356 -------------LAVGGLSLKAQEVELRLRP---------------------DVIIATP 381
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F ++ + LV+DE DR+L + + L +L T L
Sbjct: 382 GRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTL 426
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ ++ P + +
Sbjct: 427 PKSRQT-----------------------MLFSATMTSSVDKLVRVGMNKPARVMVDSQK 463
Query: 340 YKLPERL--ESYKLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
K L E +L + K + YLV + +++ E+ IVF + HR + FG
Sbjct: 464 NKTVGTLVQEFVRLRPGREDKRMGYLVHICKTMHTERVIVFFRQKKEAHRARII---FGL 520
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L + E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P I+
Sbjct: 521 LGMSCAELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQNIE 580
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ G TL + + K K ++ I S
Sbjct: 581 IYVHRVGRTARAGRTGIAITLAAEPDRKVVKAAVKAGKAQGAKIMS 626
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 184/428 (42%), Gaps = 113/428 (26%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
IAE F A+ + L + VG
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLVGGI 127
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
YLV+DE DRLL E ++ L +L+
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILE------------------------------------ 190
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
+ P R + SAT+T+ KL + L +P+ + ++Y + L+ +K K
Sbjct: 191 -EIPLERKT-FLFSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKYK 247
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGALN 304
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L+
Sbjct: 305 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV 364
Query: 479 HKDEVKRF 486
++ E++ +
Sbjct: 365 NQYELEWY 372
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 208/454 (45%), Gaps = 109/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 310 GLASVGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKV 365
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 366 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 401
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 402 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 425
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 426 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTI 470
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL +L L+ P+ L +
Sbjct: 471 PKSRQT-----------------------MLFSATMTSSVDKLIRLGLNKPVRLMVDSKK 507
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ + IVF + HR+ + FG +
Sbjct: 508 QTVGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRII---FGLM 564
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 565 GLKAAELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEI 624
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG+ GR T+ + + K K+ ++
Sbjct: 625 YLHRVGRTARAGRSGRACTIAAEPDRKVVKEAVK 658
>gi|198423018|ref|XP_002125988.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
[Ciona intestinalis]
Length = 718
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 202/461 (43%), Gaps = 110/461 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLAL 115
+ Q I GL RD+C + TG+GKT ++ LP+++ L R + R L ++PTR+LA+
Sbjct: 197 IQQAAIPIGLLGRDICACAATGTGKTAAFMLPVLERLLYRTQSTPITRVLCLVPTRELAV 256
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
QV S + +A HS +C LA
Sbjct: 257 QVYS---------VTHHLAQHSNLRIC------------------------------LAA 277
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + + EA + P DI++ATPGRL+DH++ T F L+
Sbjct: 278 GGLDMKSQ----------EAALRQGP-----------DIVIATPGRLIDHLHNTPSFDLQ 316
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
+ L++DE DR+L E ++ + +++L C
Sbjct: 317 MVEILILDEADRMLDEFFEDQMNEIIKL----------------------------CSHH 348
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
R M+ SAT+++ +LA + L +P+ + P + + I E+
Sbjct: 349 RQ----------TMLFSATMSEQVQELAAVSLKNPVKIFVNSNTDVAPFLRQEFIRIRET 398
Query: 356 KL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVR 413
+ + + AL +VFT + + HR+ +L G L +K E G Q R
Sbjct: 399 REGDREAIVAALCSRSFISNVLVFTQTKKQAHRMHIVL---GLLGLKAGELHGNLSQGQR 455
Query: 414 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 473
++LK F+ G I +LV +D RG+D+E V V+N P + Y+HR GRTARAG+ GR
Sbjct: 456 LESLKRFKNGDIDILVCTDLAARGLDIENVKTVINLTMPNTQQHYVHRVGRTARAGKSGR 515
Query: 474 CFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
+L+ + E K K++++ A N P+ S +P +I R
Sbjct: 516 SVSLVGETERKLLKEIVKFAKN---PVKSRVVPPDVISKFR 553
>gi|357152629|ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 2
[Brachypodium distachyon]
Length = 770
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 206/457 (45%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 179 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 234
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA QV HS+ E QF
Sbjct: 235 PAIRVLILTPTRELAAQV------------------HSMIEKLAQF-------------- 262
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ L VG G+ ++V L+S DI+VATP
Sbjct: 263 -------TDIRCCLIVG-------------------GLPTKVQEVA--LRSNPDIVVATP 294
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L L++DE DRLL + + NE
Sbjct: 295 GRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSVEI----------NE---------- 334
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ ++L +L L+ P+ L +
Sbjct: 335 --------LIRMC---------PKRRQT-MLFSATMTEEIDELVKLSLNKPVRLEADPSL 376
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + E+ + + L L++ +E+ I+F+ + S HRL + FG
Sbjct: 377 KRPATLTEEVVRIRRSREANQEAVLLALCLKTF-KERVIIFSGTKHSAHRLKIM---FGL 432
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ +L+++D RG+D+ GV V+N+ P +K
Sbjct: 433 SGMKAAELHGNLTQAQRLEALELFKKQEVDILIATDIAARGIDIVGVRTVINFACPRDVK 492
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 493 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 529
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 109/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 310 GLASVGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKV 365
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 366 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 401
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 402 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 425
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 426 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTI 470
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 471 PKSRQT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKK 507
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ + IVF + HR+ + FG +
Sbjct: 508 QTVGTLVQEFVRLRPGREDKRLGYLMFLCKTVYSNRVIVFFRQKKEAHRVRIV---FGLM 564
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 565 GLKAAELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEI 624
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG+ GR T+ + + K K+ ++
Sbjct: 625 YLHRVGRTARAGRSGRACTIAAEPDRKVVKEAVK 658
>gi|307179995|gb|EFN68085.1| Probable ATP-dependent RNA helicase DDX31 [Camponotus floridanus]
Length = 871
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 222/514 (43%), Gaps = 127/514 (24%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINS 76
PVD +F L + QNM I+ + VQ Q+ I P +F +D+ I S
Sbjct: 278 PVDEPIFTKITFADLNIHPFMISNLEQNMHITKMTTVQ----QKAI-PEIFSGKDVLIRS 332
Query: 77 PTGSGKTLSYALPIVQTLS------NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
TGSGKTL+YALPIV+ L NR L AL+V+PTR+LALQ Y C
Sbjct: 333 QTGSGKTLAYALPIVELLHKIRPKLNRN-SGLSALIVVPTRELALQT------YEC---- 381
Query: 131 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 190
FI L + P + G +G KR
Sbjct: 382 -------------------FIKL---------VKPFTWIVPGYIIGGE----------KR 403
Query: 191 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 250
+A L+ +IL+ TPGRL+DHI T+ L + Y ++DE DR+L
Sbjct: 404 KAEKA-----------RLRKGCNILITTPGRLLDHIKHTKALRLNEVRYFILDEADRMLE 452
Query: 251 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 310
Y+ + + Q S EN +E+ KD R ++
Sbjct: 453 MGYEKNISDMNQEFDSKAENA--------------------QNIEQDCKDVTQSRRKTIL 492
Query: 311 LSATLTQDPNKLAQLDLHHPLFL--------TTGETRYKLPERL-------ESYKLICES 355
LSATLTQ KLA L +++P+F+ T+G ++ E L +SY ++
Sbjct: 493 LSATLTQAVEKLAGLAMYNPIFVDAAKENLETSGGDTSEINEDLIVPQSVIQSY-IVTPP 551
Query: 356 KLKPL----YLVALLQSLGEEKCIVFTSSVE----STHRLCTLLNHFGE----------L 397
KL+ + Y+V+ Q+ G+ K ++F ++ + T L ++L + +
Sbjct: 552 KLRMVTLSAYIVSRCQTPGQHKILIFMATQDMVDYHTEILSSILTESVDDNDDEDSDPLV 611
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
++ + G Q R++ K F K VL+ +D RG+D+ V+ VV Y P +
Sbjct: 612 NVEFFKLHGNMTQKERTEVFKTFSRAKSGVLLCTDVAARGLDMPKVDCVVQYTGPISTRD 671
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG G L EV+ F ++L+
Sbjct: 672 YVHRIGRTARAGCSGTATIFLTPSEVE-FVRMLE 704
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 180/429 (41%), Gaps = 106/429 (24%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ F A+ ++ L
Sbjct: 189 ELAAQIGQ---------------------------------------TFEALGASISLRC 209
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 210 AVVVGGLDMVSQSIALGKKPH---------------------IVVATPGRLLDHLEKTKG 248
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 249 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 286
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 287 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 330
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 409
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 331 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL-----HGQLS 385
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 386 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 445
Query: 470 QLGRCFTLL 478
+ GR +++
Sbjct: 446 RSGRAISII 454
>gi|171685610|ref|XP_001907746.1| hypothetical protein [Podospora anserina S mat+]
gi|170942766|emb|CAP68419.1| unnamed protein product [Podospora anserina S mat+]
Length = 798
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 206/465 (44%), Gaps = 109/465 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G + P+Q +TI L +D+ + TGSGKT ++ +PI++ L ++ V
Sbjct: 287 GLNSVGFTKPTPIQ----SKTIPIALMGKDVVGGAVTGSGKTGAFLVPILERLLYRSKKV 342
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++ PTR+LA+Q ++ K +A H+ + C
Sbjct: 343 ATTRVVILAPTRELAIQCHAVGVK---------LASHTDIKFC----------------- 376
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + EL RP D+++ATP
Sbjct: 377 -------------LAVGGLSLKVQEQELRLRP---------------------DVVIATP 402
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F +E + LV+DE DR+L + + L +L T L
Sbjct: 403 GRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEIL---------------TTL 447
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T ++L + L+ P+ + +
Sbjct: 448 PKSRQT-----------------------MLFSATMTSSVDRLIRAGLNKPVRIQVDSQK 484
Query: 340 YKLPE-RLESYKLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
R E +L + K + YLV + ++L E+ I+F + H + FG L
Sbjct: 485 KTASNLRQEFVRLRPGREKKRMGYLVHICKTLYTERVIIFFRQKKIAHETRII---FGLL 541
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ E G Q+ R +++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 542 GMSCAELHGSMNQAQRIASVEAFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQNLEI 601
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
YIHR GRTARAG+ G TL + + K K ++ I S
Sbjct: 602 YIHRIGRTARAGRSGVALTLAAEPDRKVVKAAVRAGKAQGAKITS 646
>gi|340505836|gb|EGR32122.1| hypothetical protein IMG5_095370 [Ichthyophthirius multifiliis]
Length = 540
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 195/432 (45%), Gaps = 87/432 (20%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ Q+++ L ++D+ + TGSGKTLS+ALPI+Q N+ AL++ PTR
Sbjct: 149 IQQKSLPHTLKKKDIIALAETGSGKTLSFALPILQQFLNQPHEYY-ALILSPTR------ 201
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
E+CVQ + + F + GL V + VG
Sbjct: 202 ----------------------ELCVQ-----------ISESFENLGKEFGLKVVVIVGG 228
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
++ L K P + ++ ++V TPGR+ H T+GF + +L
Sbjct: 229 LDPIKQMIALSKNPHISIYYN-----IIYIYIYLYILVVGTPGRIQYHFQNTKGFQMNNL 283
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE D+LL ++A + +L + + +TFL
Sbjct: 284 KFLVLDEADKLLNMDFEAEINDIL-------DKIPKERNTFL------------------ 318
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T +KL ++ L +P+ + T+Y+ + L K
Sbjct: 319 -------------FSATMTNKVHKLQKVSLRNPVKIEVS-TKYQTVQTLIQQYCFIPIKY 364
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YL +L CI+F ++ ++ RL +L + G + I G Q+ R +
Sbjct: 365 KDSYLAFILNENQGSSCIIFVTTCINSIRLTLMLRNLGFQAVSI---HGQMNQTKRQTAI 421
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F++G+ ++LV++D +RG+D+ ++ V+NY+ PA K YIHR GRTARAG+ G +L
Sbjct: 422 NKFKDGQKKILVATDVASRGLDIPCIDLVINYELPANTKEYIHRVGRTARAGRKGNAISL 481
Query: 478 LHKDEVKRFKKL 489
+ + +++ F K+
Sbjct: 482 ISQYDLEAFLKI 493
>gi|46124501|ref|XP_386804.1| hypothetical protein FG06628.1 [Gibberella zeae PH-1]
gi|91206590|sp|Q4I830.1|DRS1_GIBZE RecName: Full=ATP-dependent RNA helicase DRS1
Length = 796
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 206/470 (43%), Gaps = 119/470 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L ++G + P+Q ++I L +D+ + TGSGKT ++ LPI++ L R +
Sbjct: 270 GLASVGFTKPTPIQA----KSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPKKI 325
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +V+LPTR+LA+Q C H++A F + F
Sbjct: 326 PTTRVVVLLPTRELAIQ---------C---------HAVATKLAAFTDIKFT-------- 359
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + EL RP D+++ATP
Sbjct: 360 -------------LAVGGLSLKAQELELKLRP---------------------DVIIATP 385
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F+++ + LV+DE DR+L + + L +L T L
Sbjct: 386 GRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEIL---------------TTL 430
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T ++L Q+ L+ P + +
Sbjct: 431 PKSRQT-----------------------MLFSATMTSSVDRLIQIGLNRPARVMVNSQK 467
Query: 340 YKLPERLESYKLICESKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
+ ++ + +L+P YL + ++L +E+ I+F + HR +
Sbjct: 468 KTVTTLVQEF-----VRLRPGREDKRMGYLAHVCKNLYKERVIIFFRQKKDAHRARII-- 520
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
FG L + E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P
Sbjct: 521 -FGLLGLSCAELHGSMNQTQRISSVEDFRDGKVAYLLATDLASRGLDIKGVDTVINYEAP 579
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
+ Y+HR GRTARAG+ G T+ + + K K ++ I S
Sbjct: 580 QSLDIYVHRVGRTARAGRKGVALTIAAESDRKVVKAAVKAGKAQGAKIVS 629
>gi|158287566|ref|XP_309566.4| AGAP011084-PA [Anopheles gambiae str. PEST]
gi|157019713|gb|EAA05253.5| AGAP011084-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 207/466 (44%), Gaps = 113/466 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 109
P+Q + TI L RD+C + TG+GKT +Y LP ++ L N A R LV++P
Sbjct: 199 PIQAS----TIPIALMGRDICGCAATGTGKTAAYMLPTIERLLYKPNVAQAVTRVLVLVP 254
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+L QV + +A+ QF +
Sbjct: 255 TRELGAQV------------------YQVAKQLTQF---------------------TNV 275
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
VG+A+G + + + L K P D+++ATPGRL+DHI T
Sbjct: 276 DVGIAIGGLDVKAQEAVLRKNP---------------------DVVIATPGRLIDHIKNT 314
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F+L+ + L++DE DR+L E + + + I
Sbjct: 315 PSFSLDSIEILILDEADRMLDEYFAEQMKEI----------------------------I 346
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGET-RYKLPERL 346
R C R M+ SAT+T++ LA + L P +F+ +T + L +
Sbjct: 347 RSCSATRQT----------MLFSATMTEEVKDLAAVSLKKPVKIFVNNNQTVAFNLRQEF 396
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ E+ + + L AL+ + C+VF + + HRL LL L +K E G
Sbjct: 397 IRIREGREADREAI-LAALVCRTFHDHCMVFVQTKRTAHRLRILLGL---LGVKTGELHG 452
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
Q+ R ++LK F++ ++ +L+++D RG+D+ V V+N+ PA ++ YIHR GRTA
Sbjct: 453 DLTQAQRLESLKEFKDEQVDILIATDVAARGLDISTVKTVINFVMPATLEHYIHRVGRTA 512
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
RAG+ G +L + E K K++++ A + S IP +IE R
Sbjct: 513 RAGKAGVSVSLAGEQERKIVKEIVKNAVS-SVKNRIIPLDIIEKYR 557
>gi|403217172|emb|CCK71667.1| hypothetical protein KNAG_0H02520 [Kazachstania naganishii CBS
8797]
Length = 754
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 198/455 (43%), Gaps = 111/455 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK L ++G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 249 PVLK-GLAHLGYTKPSPIQSA----TIPVALQGKDVIAGAVTGSGKTAAFMIPIIERLLF 303
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
V R +V+ PTR+LA+Q++ +A+ QF S
Sbjct: 304 KPSKVAMTRVIVLTPTRELAIQISD------------------VAKKIGQFVS------- 338
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
GL+ GLAVG ++ + L RP DI
Sbjct: 339 -------------GLTFGLAVGGLNLRQQEQALKARP---------------------DI 364
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++
Sbjct: 365 VIATPGRFIDHIRNSASFNVDSVEILVLDEADRMLEEGFQDELKEIM------------- 411
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T LPS +L + SAT+ L L L P+ +
Sbjct: 412 --TMLPSKRQNL-----------------------LFSATMNSKIKSLVSLSLRRPVRIM 446
Query: 335 TGETRYKLPERLESY-KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTL 390
+ + + + ++ LKP L L++ L +++ +VF + E+ HRL +
Sbjct: 447 IDPPKQAASKLTQEFVRIRKRDNLKPALLFNLIRKLDSNAQKRIVVFVARKETAHRLRII 506
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L G + + E G Q R +++ F+ + VL+ +D +RG+D+ + V+NYD
Sbjct: 507 LGLLG---MAVAELHGSLTQEQRLESVTRFKSLDVPVLICTDLASRGLDIPKIEVVINYD 563
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
P + Y+HR GRTARAG+ GR TL+ + +R
Sbjct: 564 MPKSHEIYLHRVGRTARAGREGRSVTLVGESSQER 598
>gi|67471357|ref|XP_651630.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56468397|gb|EAL46244.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702889|gb|EMD43437.1| ATP-dependent RNA helicase DBP6, putative [Entamoeba histolytica
KU27]
Length = 500
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 213/486 (43%), Gaps = 103/486 (21%)
Query: 47 GISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALV 106
GI L+P+Q V Q + D+ + +PTGSGKTL+Y LP+++ L N ++ ++
Sbjct: 84 GIKELYPMQKIVQQFIFST---DTDIAVRAPTGSGKTLAYTLPLLK-LINPLFNHIQVVI 139
Query: 107 VLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPA 166
++PT LAL QV +V +
Sbjct: 140 LIPTLPLAL---------------------------------------QVSNVMKPLLKT 160
Query: 167 VGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI 226
+ ++ + +G+SSI E S C ++V TP RL++H+
Sbjct: 161 INCNL-VCLGESSIEKETS------------CNS------------HVIVTTPIRLLNHL 195
Query: 227 NATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSL 286
+ + L+ L YL+ DETD+LL +P + L + S P +
Sbjct: 196 SKS-TLDLKWLQYLIYDETDKLLT------IPALFPLLNIIKKQYIS------PQYMVDI 242
Query: 287 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT-----------T 335
KT + V + + ++ SATL+ P QL ++ PL LT
Sbjct: 243 KTGKSLNVFSSSTN----QFRSLLFSATLSSSPKAFKQLQMNKPLLLTFDDSFVRDINEI 298
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
+T+Y LP +E+ K L ++ LL++ G K I+F +S + L L+
Sbjct: 299 TQTKYVLPSTIENRYTPVLPIEKDLVVLELLKTSG--KSIIFCNSNNTAFVLFRLIQEMA 356
Query: 396 ELRIKIKEYSGL----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
E K K+ G +Q + K +K I V +++D M+RG+D++G+ V+N+D
Sbjct: 357 EFIGKDKKEIGCIISSMKQKEKLKVIKRVENDSINVFITTDLMSRGIDIKGLKTVINFDC 416
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI-PSSLIES 510
P + Y+HRAGRT RAG G C T++ +EV K L+K +N+ + I SLI+S
Sbjct: 417 PVSTQLYVHRAGRTGRAGNEGICHTIVLTNEVGNLKSYLKKMNNELHKVSVIVEESLIKS 476
Query: 511 LRPVYK 516
+ K
Sbjct: 477 YNKITK 482
>gi|259488879|tpe|CBF88686.1| TPA: ATP-dependent RNA helicase (Drs1), putative (AFU_orthologue;
AFUA_1G14990) [Aspergillus nidulans FGSC A4]
Length = 814
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 192/425 (45%), Gaps = 107/425 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 115
+ Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+
Sbjct: 324 IQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAV 383
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q C N+ A + + F L V
Sbjct: 384 Q---------CYNV---------ATKLATYTDITFCQL---------------------V 404
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 405 GGFSLREQENVLKKRP---------------------DVIIATPGRFIDHMRNSASFTVD 443
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L LV+DE DR+L + + L +L T +P + +
Sbjct: 444 TLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT---------- 478
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYKLI 352
M+ SAT+T +KL ++ L+ P+ L T T L + +
Sbjct: 479 -------------MLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVTLVQEFVRLRPG 525
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
E K + YL+ L + + + IVF + HR+ + FG L +K E G Q
Sbjct: 526 REDK-RLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIV---FGLLGLKAAELHGSMSQEQ 581
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R K++++FR+G + L+++D +RG+D++GV V+NY+ P + Y+HR GRTARAG+ G
Sbjct: 582 RIKSVESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQSHEIYVHRVGRTARAGRSG 641
Query: 473 RCFTL 477
R T+
Sbjct: 642 RACTI 646
>gi|307214987|gb|EFN89832.1| Probable ATP-dependent RNA helicase DDX27 [Harpegnathos saltator]
Length = 734
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 213/481 (44%), Gaps = 118/481 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ M + P+Q A TI L RD+C + TG+GKT +Y LP ++ L
Sbjct: 165 PLLK-AITTMNFLTPTPIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLMY 219
Query: 97 RAVR---CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
+ + R LV++PTR+L +QV + + + QF S+
Sbjct: 220 KPLDGPAVTRVLVLVPTRELGVQV------------------YQVTKQLSQFTSV----- 256
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
GL+VG + + S L + P D
Sbjct: 257 ----------------ETGLSVGGLDVKVQESILRRNP---------------------D 279
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+ T F+L+ + L++DE DR+L E + + +
Sbjct: 280 IVIATPGRLIDHLRNTPTFSLDIIEVLILDEADRMLDEYFAEQMKYI------------- 326
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
+ +C R M+ SAT+T++ LA + L P+ +
Sbjct: 327 ---------------VNQCSRSRQT----------MLFSATMTEEVKDLAAVSLDKPIKI 361
Query: 334 ---TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + + L + + E + + L AL+ + +VF + + HRL L
Sbjct: 362 FVDSNQDVAFNLRQEFIRIRKEREGDREAI-LAALICRTFHDHVMVFVQTKKQAHRLHIL 420
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L G L +K+ E G Q R + L+ F++ I +L+++D RG+D+ GV V+N+
Sbjct: 421 L---GLLGVKVGELHGNLTQPQRLENLQEFKDEIINILIATDVAARGLDISGVKTVINFV 477
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 508
PA ++ YIHR GRTARAG++G +L + E K+++++A N P+ + IP +I
Sbjct: 478 MPATLQHYIHRVGRTARAGRVGVSVSLAGEQERSLVKEVIKRAKN---PVKNRIIPPDII 534
Query: 509 E 509
E
Sbjct: 535 E 535
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 189/431 (43%), Gaps = 107/431 (24%)
Query: 60 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
QE P L + +D+ + TGSGKT +++LPI+Q L R AL++ PTR+LA+Q
Sbjct: 26 QEQAIPHLLQGQDVIGLAQTGSGKTGAFSLPILQALMERPQEHF-ALILSPTRELAIQ-- 82
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
IAE QV+ A+ +G+ + VG
Sbjct: 83 -------------------IAE--------------QVE----ALGSGIGVKCAVLVGGI 105
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
+ + L KRP ILV TPGR++DH++ T+GF L+ L
Sbjct: 106 DMMAQAIALAKRPH---------------------ILVGTPGRVVDHLSNTKGFNLKQLK 144
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
+LV+DE D+LL ++ + +L++ D +
Sbjct: 145 HLVLDEADKLLDMDFEQEIDQILKVIPRDRRTQL-------------------------- 178
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
SAT+T KL + L P+ + +Y E L + +K K
Sbjct: 179 ------------FSATMTNKVQKLQRACLVRPVKVEVA-AKYSTVETLRQQYVFIPAKYK 225
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
YL +L L ++FT + EST R+ +L + G + I G Q R L
Sbjct: 226 DCYLAYVLNELSGSTFMIFTRTCESTRRIALMLRNLGFGAVPI---HGHMSQPKRLGALN 282
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F+ G+ +L ++D +RG+D+ V+ V+NYD K YIHR GRTARAG+ GR T++
Sbjct: 283 KFKAGERSILAATDVASRGLDIPSVDVVINYDNS---KDYIHRVGRTARAGRSGRSVTIV 339
Query: 479 HKDEVKRFKKL 489
+ +V+ F+K+
Sbjct: 340 TQYDVELFQKI 350
>gi|401840824|gb|EJT43489.1| DRS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 758
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 195/448 (43%), Gaps = 111/448 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L N+G + P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 247 PVLK-GLANLGYVTPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 301
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LALQV A++ Q
Sbjct: 302 KPAKIASTRVIVLLPTRELALQV---------------------ADVGKQI--------- 331
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
A P++ + GLAVG ++ + L RP DI
Sbjct: 332 ------ARFVPSI--TFGLAVGGLNLRQQEQMLKSRP---------------------DI 362
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S +N
Sbjct: 363 VIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSSRQN---- 418
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
++ SAT+ L L L P+ +
Sbjct: 419 ----------------------------------LLFSATMNSKIKSLVSLSLKRPVRIM 444
Query: 335 TGETRYKLPERLESY-KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTL 390
+ + + + ++ LKP + L++ L +++ +VF + ES HRL +
Sbjct: 445 IDPPKKAATKLTQEFVRIRKRDHLKPALIFNLIRKLDPMAQKRIVVFVARKESAHRLRII 504
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
+ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD
Sbjct: 505 M---GLLGMSVGELHGSLTQEQRLDSVSKFKNLEVPVLICTDLASRGLDIPKIEVVINYD 561
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLL 478
P + Y+HR GRTARAG+ GR T +
Sbjct: 562 MPKSHEVYLHRVGRTARAGREGRSVTFV 589
>gi|319411502|emb|CBQ73546.1| related to DRS1-RNA helicase of the DEAD box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/519 (25%), Positives = 212/519 (40%), Gaps = 157/519 (30%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-- 99
AL ++ P+Q TI L +D+ + TGSGKT ++ +P ++ L+ RA
Sbjct: 347 ALSSLSFHKPTPIQ----SRTIPIALAGKDIVAGAVTGSGKTAAFMIPTLERLTWRAKGR 402
Query: 100 ---RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R L++ PTR+LA+Q C +S+ + +F + F
Sbjct: 403 AQEAKTRVLILAPTRELAIQ---------C---------YSVGKSIAKFTDIRFC----- 439
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
L VG S+ + +EL RP ++++
Sbjct: 440 ----------------LCVGGLSVKSQEAELKLRP---------------------EVVI 462
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH+ + FTL+ + LV+DE DR+L + + L +
Sbjct: 463 ATPGRLIDHVRNSASFTLDDVEILVMDEADRMLEDGFADELNEI---------------- 506
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
++ C P M+ SAT+T D +L +L L P+ L
Sbjct: 507 ------------VKSC---------PKGARQTMLFSATMTDDVEQLVRLSLKRPVRL--- 542
Query: 337 ETRYKLPERLESYKLI-----------------------------------CESKLKPLY 361
+ P+R + KLI E +P
Sbjct: 543 ---FVDPKRTTAKKLIQEFVRVRGSGPGGVAGADGLAGVGDEPSTSTVGKRSEDAQRPAL 599
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 421
L+AL + I+F S + H+L + FG L + E G Q R L FR
Sbjct: 600 LLALCTRTFTSQVIIFVRSKKLAHQLKIV---FGLLGLSAGELHGDLSQEQRIDALTDFR 656
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
+GK+ L+++D +RG+D++GV V+NYD P + Y+HR GRTARAG+ GR TL+ +
Sbjct: 657 DGKVDFLLATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEA 716
Query: 482 EVKRFKKLLQKADNDSCPIHSIPSSL-------IESLRP 513
+ + K ++K+ + IP+++ +E L+P
Sbjct: 717 DRRMLKLAIKKSSAEQIKHRIIPAAVASKMLETLEQLKP 755
>gi|154282339|ref|XP_001541965.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410145|gb|EDN05533.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 826
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 167/360 (46%), Gaps = 92/360 (25%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 131
LCI++ TGSGKTL+YALP+V + + + LR LVV+PTR+L Q A C+ C
Sbjct: 286 LCISATTGSGKTLAYALPLVAGIEHSSYPRLRGLVVVPTRELVWQAREA-CELC------ 338
Query: 132 LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 191
A GL +G AVG +S+ +E + LIK
Sbjct: 339 --------------------------------ATGTGLRIGTAVGTASLNEEQASLIKHE 366
Query: 192 KL----------------EAGICYDPEDVLQELQSA--------------VDILVATPGR 221
+ +A ++ ++ + E +++ VDIL+ TPGR
Sbjct: 367 QFYSPRTDQIKNIQQMSADAWTSFNIQEYISEAENSPSAFPNHVAIPSPSVDILICTPGR 426
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V+ + NR
Sbjct: 427 LVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVVIPAL---DRNRID-------- 475
Query: 282 AFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+ GV E G+K PRL K++LSAT+T+D +KL L L +P + + + R
Sbjct: 476 -----VNAKSGGVLQELGWK-TCKPRLQKIILSATMTRDISKLQALRLRNPKLVVSDDPR 529
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 415
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
TL AFR GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAFRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 476 TLLHKDEVKRF 486
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|238483821|ref|XP_002373149.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
gi|220701199|gb|EED57537.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
Length = 870
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 187/382 (48%), Gaps = 51/382 (13%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
E+ +K S LP W+ +P+ S E P L + L++ L++ G F VQ V
Sbjct: 226 EQDEKPSYSSLPSWLANPLRTSAEEKTPFSSLGIEENVLRI-LESNGYKEAFAVQSTVIP 284
Query: 61 ETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 119
+ G D+CI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q
Sbjct: 285 LLLQGSKNHPGDICISAATGSGKTLSYVLPLVTALEQVPAPRLRGLIVVPTRELVKQARE 344
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG--- 176
A C+ C GL ++ + ++ + SL +V +V+ + L
Sbjct: 345 A-CELCAAG-SGLRVASAVGNVAIKEEQR---SLMRVDEVYGPENFKLRQQDKLTDNDWL 399
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
S+ D IS+ + + G +++ + VDIL+ TPGRL+DHI T+GFTL+H
Sbjct: 400 NFSLQDYISDAGDQSESLPGY-------IRKAEPNVDILICTPGRLVDHIRYTKGFTLKH 452
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L +LV+DE DRLL E++Q W+ V+ ++ + DA TF F S K + G+
Sbjct: 453 LEWLVIDEADRLLNESFQEWVDVVM-----NSLDARKDAGTF---GF-SGKFLANLGLPI 503
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------ 338
KD PR K++LSAT+T+D +KL L L +P + G
Sbjct: 504 QTKD---PR--KVILSATMTKDISKLNSLRLSNPKLVIVGSAEQATSREDESGIHDRIGD 558
Query: 339 RYKLPERLESYKL-ICESKLKP 359
+Y LP RL+ Y L + + KP
Sbjct: 559 QYTLPPRLKEYSLSVGDGSQKP 580
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R+GKI +++++D +RG+D++ + +VVNYD P I TY+HR GRTAR
Sbjct: 733 NKSSASRKTLTAYRQGKISIIIATDRASRGLDLQSLTHVVNYDVPTSITTYVHRVGRTAR 792
Query: 468 AGQLGRCFTLLHKDEVKRF-KKLLQKADN 495
AG+ G +TL+ E + F +++Q +DN
Sbjct: 793 AGREGSAWTLVAHREGRWFTNEVIQTSDN 821
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 109/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 311 GLASVGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKV 366
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 367 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 402
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 403 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 426
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 427 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTI 471
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 472 PKSRQT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKK 508
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ + IVF + HR+ + FG +
Sbjct: 509 QTVGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRII---FGLM 565
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 566 GLKAAELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEI 625
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG+ GR T+ + + K K+ ++
Sbjct: 626 YLHRVGRTARAGRSGRACTIAAEPDRKVVKEAVK 659
>gi|388854481|emb|CCF51868.1| related to DRS1-RNA helicase of the DEAD box family [Ustilago
hordei]
Length = 935
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/572 (24%), Positives = 225/572 (39%), Gaps = 170/572 (29%)
Query: 1 MEEAKKKSM----PVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQV 56
E+AKK + P +S + D P L+ AL + P+Q
Sbjct: 296 QEKAKKAAFFAEEPTTTISKSKSSATTDADSSFTSFQLSRPLLR-ALTTLSFHKPTPIQ- 353
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL------RALVVLPT 110
TI L +D+ + TGSGKT ++ +P ++ L+ RA R L++ PT
Sbjct: 354 ---SRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKSRTPLQAKSRVLILAPT 410
Query: 111 RDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLS 170
R+LA+Q C KNI +F + F
Sbjct: 411 RELAIQ-----CYSVGKNI-------------AKFTDIRFC------------------- 433
Query: 171 VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR 230
L VG S+ + +EL RP ++++ATPGRL+DH+ +
Sbjct: 434 --LCVGGLSVKSQEAELKLRP---------------------EVVIATPGRLIDHVRNSA 470
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
FTL+ + LV+DE DR+L++ + L + ++
Sbjct: 471 SFTLDDIEILVMDEADRMLQDGFADELNEI----------------------------VK 502
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 350
C P M+ SAT+T D +L +L L P+ L + P+R + K
Sbjct: 503 SC---------PKGARQTMLFSATMTDDVEQLVRLSLKRPVRL------FVDPKRTTAKK 547
Query: 351 LI------------------------------------------CESKLKPLYLVALLQS 368
L+ E +P L+AL
Sbjct: 548 LVQEFVRVRGTASAGVAGTVADEAPSTSNAETSSAETSSGGGRKSEDAQRPALLLALCTR 607
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
+ I+F S + H+L + FG L + E G Q R L AFR+GK+ L
Sbjct: 608 TFTSQVIIFVRSKKLAHQLKIV---FGLLGLSAGELHGDLSQEQRIDALTAFRDGKVDFL 664
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
+++D +RG+D++GV V+NYD P + Y+HR GRTARAG+ GR TL+ + + + K
Sbjct: 665 IATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEADRRMLKL 724
Query: 489 LLQKADNDSCPIHSIPS-------SLIESLRP 513
++K+ + IP+ + +E L+P
Sbjct: 725 AIKKSTAEQIKHRIIPAPVACKMLATLEELKP 756
>gi|317140099|ref|XP_003189236.1| ATP-dependent RNA helicase dbp6 [Aspergillus oryzae RIB40]
Length = 858
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 187/382 (48%), Gaps = 51/382 (13%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60
E+ +K S LP W+ +P+ S E P L + L++ L++ G F VQ V
Sbjct: 226 EQDEKPSYSSLPSWLANPLRTSAEEKTPFSSLGIEENVLRI-LESNGYKEAFAVQSTVIP 284
Query: 61 ETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNS 119
+ G D+CI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q
Sbjct: 285 LLLQGSKNHPGDICISAATGSGKTLSYVLPLVTALEQVPAPRLRGLIVVPTRELVKQARE 344
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG--- 176
A C+ C GL ++ + ++ + SL +V +V+ + L
Sbjct: 345 A-CELCAAG-SGLRVASAVGNVAIKEEQR---SLMRVDEVYGPENFKLRQQDKLTDNDWL 399
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
S+ D IS+ + + G +++ + VDIL+ TPGRL+DHI T+GFTL+H
Sbjct: 400 NFSLQDYISDAGDQSESLPGY-------IRKAEPNVDILICTPGRLVDHIRYTKGFTLKH 452
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L +LV+DE DRLL E++Q W+ V+ ++ + DA TF F S K + G+
Sbjct: 453 LEWLVIDEADRLLNESFQEWVDVVM-----NSLDARKDAGTF---GF-SGKFLANLGLPI 503
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET------------------ 338
KD PR K++LSAT+T+D +KL L L +P + G
Sbjct: 504 QTKD---PR--KVILSATMTKDISKLNSLRLSNPKLVIVGSAEQATSQEDESGIHDRIGD 558
Query: 339 RYKLPERLESYKL-ICESKLKP 359
+Y LP RL+ Y L + + KP
Sbjct: 559 QYTLPPRLKEYSLSVGDGSQKP 580
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R+GKI +++++D +RG+D++ + +VVNYD P I TY+HR GRTAR
Sbjct: 721 NKSSASRKTLTAYRQGKISIIIATDRASRGLDLQSLTHVVNYDVPTSITTYVHRVGRTAR 780
Query: 468 AGQLGRCFTLLHKDEVKRF-KKLLQKADN 495
AG+ G +TL+ E + F +++Q +DN
Sbjct: 781 AGREGSAWTLVAHREGRWFTNEVIQTSDN 809
>gi|219123243|ref|XP_002181938.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406539|gb|EEC46478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 433
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 188/431 (43%), Gaps = 103/431 (23%)
Query: 60 QETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
Q ++ P FE RD+ + TGSGKT ++ LPI+Q L + V+ AL++ PTR+LA Q
Sbjct: 66 QASVLPEAFEGRDIIGLAETGSGKTGAFCLPILQGLLRKPVKGTAALILTPTRELAFQ-- 123
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
+ V + A+G + VG
Sbjct: 124 -------------------------------------ILQVVQGLGQAMGATAVCVVGGV 146
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
+ L + P +++ATPGRL+DH+ T+GF L +
Sbjct: 147 DRTSQAIALGRNPH---------------------VVIATPGRLLDHLKDTKGFNLNKVR 185
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
YLV+DE DR+L ++ L +L DN +P +L
Sbjct: 186 YLVLDEADRMLSMDFEEELHQIL-----DN----------MPEQRQTL------------ 218
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
+ SAT+T KL + L P+ + T+++ P++L L +K K
Sbjct: 219 -----------LFSATMTTQVAKLERASLKDPVKVQV-STKFQTPKQLLQSYLFIPAKYK 266
Query: 359 PLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLK 418
YL L+ + +VF ++ + RL +L + G + + G QS R L+
Sbjct: 267 DCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAVCLH---GQMDQSKRLGALQ 323
Query: 419 AFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
F G +L+ +D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ GR ++
Sbjct: 324 KFSSGDRTILLCTDVASRGLDLPQVDLVINFDLPGHGKEYIHRVGRTARAGKSGRAIAMV 383
Query: 479 HKDEVKRFKKL 489
+ +V+ +++L
Sbjct: 384 TQYDVEVYQRL 394
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 192/448 (42%), Gaps = 106/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A MG + P+Q E+I L RD+ + TGSGKT S+ LPI+Q L +
Sbjct: 85 ACDKMGYKAPTPIQ----SESIPLALQGRDIIGLAETGSGKTASFVLPILQALMEKP--- 137
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
++ FGL+
Sbjct: 138 -------------------------QSFFGLV---------------------------- 144
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+AP L+ +++ S+ I+ ++ L G+ P+ + L I+VATPGR
Sbjct: 145 -LAPTRELAYQISLACESLGATIN--VRSTTLVGGMDMVPQSI--ALGKKPHIIVATPGR 199
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L +LV+DE DRLL + L +L++ E R TFL
Sbjct: 200 LLDHLENTKGFSLRSLKFLVMDEADRLLDMDFGPILDKILKVL--PRERR-----TFL-- 250
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SATL+ L + L +P ++ ++Y
Sbjct: 251 -----------------------------FSATLSSKVESLQRASLSNPARVSISSSKYA 281
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
E L+ L+ K K +YLV LL + I+F +V T R+ LL G I +
Sbjct: 282 TVETLQQTYLLRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPL 341
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR ++LV++D RG+D+ V+ V+N+D P KTYIHR
Sbjct: 342 H---GQMSQSARLGALGKFRSKSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHR 398
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G + + + +V+ ++++
Sbjct: 399 VGRTARAGKSGTAISFVTQYDVEIWQRI 426
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 188/433 (43%), Gaps = 103/433 (23%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
A+ Q++I L RD+ + TGSGKT ++ALPI+Q+L + R +L++ PTR+LA+Q
Sbjct: 44 AIQQKSIPEALQGRDVIGLAQTGSGKTGAFALPILQSLLDEP-RTYHSLILSPTRELAIQ 102
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
IAE QV+ A+ +G+ VG
Sbjct: 103 ---------------------IAE--------------QVE----ALGRGIGVRTATLVG 123
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
+ + L KRP ++V TPGR++DH+ T+GF L+
Sbjct: 124 GIEMTSQAIMLGKRPH---------------------VVVGTPGRVVDHLENTKGFGLKA 162
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L LV+DE DRLL ++ + +L++ D +
Sbjct: 163 LKVLVLDEADRLLNLDFEEEIDKILRVIPQDRRTQL------------------------ 198
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
SAT+T KL + L P+ + +Y + L + L +K
Sbjct: 199 --------------FSATMTSKVQKLQRACLRDPVKVEV-SAKYSTVDSLRQHYLFIPAK 243
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
K Y L L IVF + + T +L + + G + I G Q R
Sbjct: 244 HKDCYATYLFNELSASTLIVFARTCDQTRKLALIARNLGFGAVPIH---GQMSQPKRIAA 300
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
L+ F+ G+ +L+++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G T
Sbjct: 301 LQKFKAGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAVT 360
Query: 477 LLHKDEVKRFKKL 489
++ + +V+ ++K+
Sbjct: 361 MVTQYDVELYQKI 373
>gi|315043240|ref|XP_003170996.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
gi|311344785|gb|EFR03988.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
Length = 814
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 109/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 313 GLASVGFSAPTPIQ----KKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKV 368
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 369 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 404
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 405 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 428
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 429 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTI 473
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 474 PKSRQT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKK 510
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ + IVF + HR+ + FG +
Sbjct: 511 QTVGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRII---FGLM 567
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 568 GLKAAELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEI 627
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG+ GR T+ + + K K+ ++
Sbjct: 628 YLHRVGRTARAGRSGRACTIAAEPDRKVVKEAVK 661
>gi|406989076|gb|EKE08894.1| hypothetical protein ACD_16C00239G0015 [uncultured bacterium]
Length = 413
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 203/464 (43%), Gaps = 112/464 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQT 93
L+P+ A+ +G +S P+Q E P L E RD+ + TGSGKT S+ LP++
Sbjct: 8 LNPKTLQAIAEVGYTSPTPIQ-----EKAVPLLLEGRDIIALAQTGSGKTASFILPLLDL 62
Query: 94 LS-NRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
L+ RA R R+L++ PTR+LA QV
Sbjct: 63 LTRGRAKARMPRSLIMEPTRELAAQV---------------------------------- 88
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
D FA +V L +G S D+ +L+K
Sbjct: 89 -----ADDFAIYGKHYTFTVALLIGGESFGDQEKKLLK---------------------G 122
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
VD+L+ATPGRL+D + + L + LV+DE DR+L ++P + ++
Sbjct: 123 VDVLIATPGRLLDLYDRGK-ILLNDVKMLVIDEADRMLD---MGFIPDIERI-------- 170
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
++ LP PR + SAT+ + KL Q L +P
Sbjct: 171 ----ASLLP-----------------------PRQTAL-FSATMPEPIRKLTQQFLKNPE 202
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
+T T K P +E + + K K L +LL++ + +VF + + +
Sbjct: 203 EITISATS-KAPSLIEQFIVRAPEKEKRDVLRSLLKAEDLHQVLVFCNRKREVDIVYNSM 261
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
+G K+ G QSVR+KTLK F+EGKI +L++SD RG+D+E + V+N+
Sbjct: 262 KRYG---FKVGALHGDITQSVRNKTLKDFKEGKIDLLIASDVAARGLDIEDLPGVINFHV 318
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
P + YIHR GRT RAG+ G+ FTL+ E K +L+ + +
Sbjct: 319 PTTPEDYIHRIGRTGRAGKEGKAFTLVSPHEGKYLDPILKTSQH 362
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 183/429 (42%), Gaps = 115/429 (26%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-----------SNRAVRCLRALVVLPTRDLALQVN 118
+D+ + TGSGKT ++A+PI+Q L R A V+ PTR+LA+Q
Sbjct: 47 KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQ-- 104
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
IAE F A+ + L + G
Sbjct: 105 -------------------IAEQ------------------FEALGADISLRCAVLFGGI 127
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
+ L KRP ++VATPGRL DH++ T+GF+L+ L
Sbjct: 128 DRMQQTIALGKRPH---------------------VIVATPGRLWDHMSDTKGFSLKSLK 166
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGF 298
YLV+DE DRLL E ++ L +L+
Sbjct: 167 YLVLDEADRLLNEDFEKSLNQILE------------------------------------ 190
Query: 299 KDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
PR K L SAT+T+ KL + L +P+ + ++Y + L+ +K
Sbjct: 191 ---EIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAA-SKYSTVDTLKQQYRFVAAKY 246
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YLV +L + E ++FT + + T L +L G I I SG QS R L
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPI---SGQMTQSKRLGAL 303
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G+ +LV +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G +L
Sbjct: 304 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISL 363
Query: 478 LHKDEVKRF 486
+++ E++ +
Sbjct: 364 VNQYELEWY 372
>gi|74143864|dbj|BAE41247.1| unnamed protein product [Mus musculus]
Length = 323
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 142/277 (51%), Gaps = 42/277 (15%)
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
+I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 12 NIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK--- 68
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
TFL SAT+T+ KL + L +P+
Sbjct: 69 ----TFL-------------------------------FSATMTKKVQKLQRAALKNPVK 93
Query: 333 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 94 CAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLR 152
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
+ G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D P
Sbjct: 153 NLGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIP 209
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+ K YIHR GRTARAG+ G+ T + + +V+ F+++
Sbjct: 210 THSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 246
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 109/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G S+ P+Q ++TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 311 GLASVGFSTPTPIQ----RKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKV 366
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A F + F L
Sbjct: 367 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATFTDITFCQL------ 402
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 403 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 426
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 427 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFAEELNEIL---------------TTI 471
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 472 PKSRQT-----------------------MLFSATMTNSVDKLIRVGLNKPVRLMVDSKK 508
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L +++ + IVF + HR+ + FG +
Sbjct: 509 QTVGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIV---FGLM 565
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FR+ K+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 566 GLKAAELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEI 625
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG+ GR T+ + + K K+ ++
Sbjct: 626 YLHRVGRTARAGRSGRACTIAAEPDRKVVKEAVK 659
>gi|152013519|sp|A4QYM6.1|DRS1_MAGO7 RecName: Full=ATP-dependent RNA helicase DRS1
gi|440472865|gb|ELQ41697.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae Y34]
gi|440482949|gb|ELQ63394.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae P131]
Length = 790
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 207/466 (44%), Gaps = 111/466 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L ++G + P+Q +TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 269 GLTSVGFAKPTPIQ----SKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKV 324
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++ PTR+LA+Q C + +A H+ + C
Sbjct: 325 PTSRVVILAPTRELAIQ---------CHAVATKLASHTDIKFC----------------- 358
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + SEL RP D+++ATP
Sbjct: 359 -------------LAVGGLSLKVQESELRLRP---------------------DVIIATP 384
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F ++ + LV+DE DR+L + + L +L T L
Sbjct: 385 GRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEIL---------------TTL 429
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTG 336
P S +T M+ SAT+T + L ++ L+ P+ L +
Sbjct: 430 PK---SRQT--------------------MLFSATMTSSVDNLIRVGLNKPVRLMVDSQK 466
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T L + + E K + YLV L ++L E+ I+F + H + FG
Sbjct: 467 KTVVTLTQEFVRLRPGREEK-RMGYLVYLCKNLYTERVIIFFRQKKIAHHARII---FGL 522
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L + E G Q R ++++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 523 LGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLE 582
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ G TL + + K K ++ I S
Sbjct: 583 IYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISS 628
>gi|401884069|gb|EJT48246.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 435
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 59/365 (16%)
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAV-----------GLSVGLAVGQS-SIADEISEL 187
E+C +SL F ++ AAI PA+ G +V LA +S SIA ++ L
Sbjct: 34 ELCESCESLGFKHPTDIQ--VAAIPPALTGRDIIGIAQTGSAVLLAHPRSDSIAKQVQAL 91
Query: 188 IKRPKLEAGICYDPEDVLQE---LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
+ + D++ + L I+VATPGRLMDH+ T+GF+L+ L YLV+DE
Sbjct: 92 GAPIGVRTAVIVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLDE 151
Query: 245 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 304
DRLL + + +L++ + +TFL
Sbjct: 152 ADRLLDLDFGPIIDKLLKVIPKER-------NTFL------------------------- 179
Query: 305 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA 364
SATL+ KL + L+ P+ + +++Y L Y + K YL
Sbjct: 180 ------FSATLSTKVEKLKRASLNKPIQVKV-DSKYSTVSTLMQYYVFFPEVQKDAYLFY 232
Query: 365 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 424
L+ L I+FTS+V+ RL +LN G I + G QS R +L F+ G
Sbjct: 233 LVNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLH---GQMSQSARLGSLNKFKSGG 289
Query: 425 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
++LV++D +RG+D+ V+ V+N+D P+ K Y+HR GRTARAG+ G+ TL+ + +V
Sbjct: 290 RKILVATDVASRGLDIPSVDLVINFDIPSNSKDYVHRVGRTARAGRSGKSITLVTQYDVV 349
Query: 485 RFKKL 489
K +
Sbjct: 350 MLKGI 354
>gi|325090745|gb|EGC44055.1| ATP-dependent RNA helicase DBP6 [Ajellomyces capsulatus H88]
Length = 826
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 167/360 (46%), Gaps = 92/360 (25%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 131
LCI++ TGSGKTL+YALP+V + + + LR LVV+PTR+L Q A C+ C
Sbjct: 286 LCISAATGSGKTLAYALPLVAGIEHSSYPRLRGLVVVPTRELVWQAREA-CELC------ 338
Query: 132 LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 191
A GL +G AVG +S+ +E + LIK
Sbjct: 339 --------------------------------ATGRGLRIGTAVGTASLNEEQASLIKHE 366
Query: 192 KL----------------EAGICYDPEDVLQELQ--------------SAVDILVATPGR 221
+ +A ++ ++ + E + S+VDIL+ TPGR
Sbjct: 367 QFYSPSIDQIKNIQQMSADAWTSFNIQEYISEAESSHSAFPNHVAIPSSSVDILICTPGR 426
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V+ + NR
Sbjct: 427 LVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVVIPAL---DRNRID-------- 475
Query: 282 AFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+ GV E G+K PRL K++LSAT+T+D +KL L L +P + + + R
Sbjct: 476 -----VNAKSGGVLQELGWK-TCKPRLQKIILSATMTRDISKLQVLRLRNPKLVVSDDPR 529
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 415
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
TL A+R GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAYRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 476 TLLHKDEVKRF 486
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|240274402|gb|EER37918.1| ATP-dependent RNA helicase dbp6 [Ajellomyces capsulatus H143]
Length = 826
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 167/360 (46%), Gaps = 92/360 (25%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--D 71
W+ P + + +L ++ L L+ G + FP+Q AV E +G G D
Sbjct: 228 WLTQPFAAATLSERNFSNL-GVNKTLVSVLERRGYTEAFPIQAAVL-ELLGTGKHRHSGD 285
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 131
LCI++ TGSGKTL+YALP+V + + + LR LVV+PTR+L Q A C+ C
Sbjct: 286 LCISAATGSGKTLAYALPLVAGIEHSSYPRLRGLVVVPTRELVWQAREA-CELC------ 338
Query: 132 LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 191
A GL +G AVG +S+ +E + LIK
Sbjct: 339 --------------------------------ATGRGLRIGTAVGTASLNEEQASLIKHE 366
Query: 192 KL----------------EAGICYDPEDVLQELQ--------------SAVDILVATPGR 221
+ +A ++ ++ + E + S+VDIL+ TPGR
Sbjct: 367 QFYSPSIDQIKNIQQMSADAWTSFNIQEYISEAESSHSAFPNHVAIPSSSVDILICTPGR 426
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+ HI +T+GFTL HL +LV+DE DRLL E++Q W+ V+ + NR
Sbjct: 427 LVQHIKSTKGFTLGHLEWLVIDEADRLLNESFQEWVEVVIPAL---DRNRID-------- 475
Query: 282 AFGSLKTIRRCGV--ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+ GV E G+K PRL K++LSAT+T+D +KL L L +P + + + R
Sbjct: 476 -----VNAKSGGVLQELGWK-TCKPRLQKIILSATMTRDISKLQVLRLRNPKLVVSDDPR 529
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSK 415
KP+ A + S+ ++F S ES RL LL+ +I + + S K
Sbjct: 646 FKPMAASASVSSV-----LIFARSSESASRLARLLSLMHPPFANRIGTLTKSNKSSTSRK 700
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
TL A+R GK+ +++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +
Sbjct: 701 TLSAYRNGKLSIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAW 760
Query: 476 TLLHKDEVKRF 486
TL+ E + F
Sbjct: 761 TLVAHSEGRWF 771
>gi|67517117|ref|XP_658442.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
gi|40746512|gb|EAA65668.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
Length = 1676
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 206/466 (44%), Gaps = 111/466 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L + ++ P+Q Q+TI L +D+ ++ TGSGKT ++ +PI++ L R V
Sbjct: 804 GLAAVNFTNPTPIQ----QKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKV 859
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ +A ++ C
Sbjct: 860 PTSRVAILMPTRELAVQ---------CYNVATKLATYTDITFC----------------- 893
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 894 -------------QLVGGFSLREQENVLKKRP---------------------DVIIATP 919
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 920 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 964
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTG 336
P + + M+ SAT+T +KL ++ L+ P+ L T
Sbjct: 965 PKSRQT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDTKK 1001
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
T L + + E K + YL+ L + + + IVF + HR+ + FG
Sbjct: 1002 NTAVTLVQEFVRLRPGREDK-RLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIV---FGL 1057
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L +K E G Q R K++++FR+G + L+++D +RG+D++GV V+NY+ P +
Sbjct: 1058 LGLKAAELHGSMSQEQRIKSVESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQSHE 1117
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ GR T+ + + K K ++ I S
Sbjct: 1118 IYVHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKAQGAKIVS 1163
>gi|242045284|ref|XP_002460513.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
gi|241923890|gb|EER97034.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
Length = 760
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 205/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 199 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 254
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA QV HS+ E QF +
Sbjct: 255 PAIRVLILTPTRELAAQV------------------HSMIEKLAQFTDIRCC-------- 288
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L VG G S+ E++ L+S DI+VATP
Sbjct: 289 ---------LIVG---GLSTKVQEVA----------------------LRSMPDIVVATP 314
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L +++DE DRLL + A + +
Sbjct: 315 GRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL------------------- 355
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ ++L +L L+ P+ L +
Sbjct: 356 ---------IRMC---------PKRRQT-MLFSATMTEEIDELIKLSLNKPVRLEADPSL 396
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + ES + + L L++ + I+F+ + +S HRL + FG
Sbjct: 397 KRPATLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKIV---FGL 452
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +K
Sbjct: 453 SGMKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFACPRDVK 512
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 513 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 549
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 190/446 (42%), Gaps = 106/446 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q+ F A+ ++ L
Sbjct: 189 ELAAQIGQ---------------------------------------TFEALGASISLRC 209
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ VG + + L K+P I+VATPGRL+DH+ T+G
Sbjct: 210 AVVVGGLDMVSQSIALGKKPH---------------------IVVATPGRLLDHLEKTKG 248
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F+L L +LV+DE DRLL + L +L+ FLP RR
Sbjct: 249 FSLRSLKFLVMDEADRLLDLDFGPILDKILK---------------FLPRE-------RR 286
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+ SAT++ L + L PL ++ ++ K L L
Sbjct: 287 T----------------FLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPL 330
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--HFGELRIKIKEYSGLQR 409
K K +YL+ L + IVFT +V R+ LL FG + + G
Sbjct: 331 FIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLH-----GQLS 385
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
QS+R L F+ +LV++D RG+D+ V+ V+N+D P TYIHR GRTARAG
Sbjct: 386 QSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAG 445
Query: 470 QLGRCFTLLHKDEVKRFKKLLQKADN 495
+ GR +++ + +++ + ++ + A N
Sbjct: 446 RSGRAISIITQYDLELWLRIEKAALN 471
>gi|322692214|gb|EFY84155.1| dependent RNA helicase drs-1 [Metarhizium acridum CQMa 102]
Length = 780
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 211/493 (42%), Gaps = 125/493 (25%)
Query: 19 VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
VD+S F+ L P L L +G + P+Q +TI L +DL + T
Sbjct: 250 VDLSSFQGMSLSR-PIL-----RGLAAVGFTKPTPIQA----KTIPIALMGKDLVGGAVT 299
Query: 79 GSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
GSGKT ++ +PI++ L R + R +V+ PTR+LA+Q C H
Sbjct: 300 GSGKTGAFFVPILERLLFRPKKIPTTRVVVLTPTRELAMQ---------C---------H 341
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
+ ++ + F LAVG S+ + EL RP
Sbjct: 342 DVGTKLARYTDIKF---------------------SLAVGGLSLKAQEVELRLRP----- 375
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
DI+VATPGR +DH+ + F ++ + LV+DE DR+L + +
Sbjct: 376 ----------------DIIVATPGRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFADE 419
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
L +L T LP + + M+ SAT+T
Sbjct: 420 LNEIL---------------TTLPKSRQT-----------------------MLFSATMT 441
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL-------YLVALLQSL 369
++L + L+ P+ L + + ++ + +L+P YL L ++
Sbjct: 442 STVDRLIRAGLNKPVRLMVDSQKKTVTTLVQEF-----VRLRPGREDKRMGYLAYLCKTF 496
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
E+ I+F + HR + FG L + E G QS R +++AFR+GK+ L+
Sbjct: 497 YHERVIIFFRQKKEAHRARII---FGLLGLSCAELHGSMNQSQRISSVEAFRDGKVSYLL 553
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
++D +RG+D++GV+ V+NY+ P ++ Y+HR GRTARAG+ G TL + + K K
Sbjct: 554 ATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRKGTAVTLAAEGDRKVVKAA 613
Query: 490 LQKADNDSCPIHS 502
++ I S
Sbjct: 614 VKAGKAQGAKITS 626
>gi|322703237|gb|EFY94849.1| ATP-dependent RNA helicase drs-1 [Metarhizium anisopliae ARSEF 23]
Length = 944
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 212/493 (43%), Gaps = 125/493 (25%)
Query: 19 VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPT 78
VD+S F+ L P L+ L +G + P+Q +TI L +D+ + T
Sbjct: 253 VDLSSFQGMSLSR-----PILR-GLAAVGFTKPTPIQA----KTIPIALMGKDVVGGAVT 302
Query: 79 GSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
GSGKT ++ +PI++ L R + R +V+ PTR+LA+Q +
Sbjct: 303 GSGKTGAFFVPILERLLFRPKKIPTTRVVVLTPTRELAMQCH------------------ 344
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
DV +A + LAVG S+ + EL RP
Sbjct: 345 ---------------------DVGTKLARYTDIKFSLAVGGLSLKAQEVELRLRP----- 378
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
DI+VATPGR +DH+ + F ++ + LV+DE DR+L + +
Sbjct: 379 ----------------DIIVATPGRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFADE 422
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
L +L T LP + + M+ SAT+T
Sbjct: 423 LNEIL---------------TTLPKSRQT-----------------------MLFSATMT 444
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPL-------YLVALLQSL 369
++L ++ L+ P+ L + + ++ + +L+P YL L ++
Sbjct: 445 STVDRLIRVGLNKPVRLMVDSQKKTVTTLVQEF-----VRLRPGREDKRMGYLAHLCKTF 499
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
E+ I+F + HR + FG L + E G QS R +++AFR+GK+ L+
Sbjct: 500 YHERVIIFFRQKKEAHRARII---FGLLGLSCAELHGSMNQSQRISSVEAFRDGKVSYLL 556
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
++D +RG+D++GV+ V+NY+ P ++ Y+HR GRTARAG+ G TL + + K K
Sbjct: 557 ATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRKGTAVTLAAEGDRKVVKAA 616
Query: 490 LQKADNDSCPIHS 502
++ I S
Sbjct: 617 VKAGKAQGAKITS 629
>gi|414589946|tpg|DAA40517.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 773
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 205/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 181 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 236
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA Q+ HS+ E QF
Sbjct: 237 PAIRVLILTPTRELAAQI------------------HSMVEKLAQF-------------- 264
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ L VG ++ +I E+ L+S DI+VATP
Sbjct: 265 -------TDIRCCLIVG--GLSTKIQEVA-------------------LRSMPDIVVATP 296
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L +++DE DRLL + A + +
Sbjct: 297 GRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL------------------- 337
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ ++L +L L+ P+ L +
Sbjct: 338 ---------IRMC---------PKRRQT-MLFSATMTEEIDELVKLSLNKPVRLEADPSL 378
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + ES + + L L++ + I+F+ + +S HRL + FG
Sbjct: 379 KRPATLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGL 434
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +K
Sbjct: 435 SGMKAAELHGNLTQAQRLEALELFKKKEVDFLIATDVAARGIDIVGVQTVINFACPRDVK 494
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 495 TYLHRVGRTARAGREGYAVTFVTDDDRCLLKAIAKKA 531
>gi|414589947|tpg|DAA40518.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 786
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 205/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 197 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 252
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA Q+ HS+ E QF
Sbjct: 253 PAIRVLILTPTRELAAQI------------------HSMVEKLAQF-------------- 280
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ L VG ++ +I E+ L+S DI+VATP
Sbjct: 281 -------TDIRCCLIVG--GLSTKIQEVA-------------------LRSMPDIVVATP 312
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L +++DE DRLL + A + +
Sbjct: 313 GRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQEL------------------- 353
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ ++L +L L+ P+ L +
Sbjct: 354 ---------IRMC---------PKRRQT-MLFSATMTEEIDELVKLSLNKPVRLEADPSL 394
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + ES + + L L++ + I+F+ + +S HRL + FG
Sbjct: 395 KRPATLTEEVVRIRRARESNQEAVLLALCLKTF-KRSVIIFSGTKQSAHRLKII---FGL 450
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +K
Sbjct: 451 SGMKAAELHGNLTQAQRLEALELFKKKEVDFLIATDVAARGIDIVGVQTVINFACPRDVK 510
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 511 TYLHRVGRTARAGREGYAVTFVTDDDRCLLKAIAKKA 547
>gi|389630538|ref|XP_003712922.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
gi|351645254|gb|EHA53115.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
Length = 799
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 207/466 (44%), Gaps = 111/466 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L ++G + P+Q +TI L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 278 GLTSVGFAKPTPIQ----SKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKV 333
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++ PTR+LA+Q C + +A H+ + C
Sbjct: 334 PTSRVVILAPTRELAIQ---------CHAVATKLASHTDIKFC----------------- 367
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + SEL RP D+++ATP
Sbjct: 368 -------------LAVGGLSLKVQESELRLRP---------------------DVIIATP 393
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F ++ + LV+DE DR+L + + L +L T L
Sbjct: 394 GRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEIL---------------TTL 438
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL---TTG 336
P S +T M+ SAT+T + L ++ L+ P+ L +
Sbjct: 439 PK---SRQT--------------------MLFSATMTSSVDNLIRVGLNKPVRLMVDSQK 475
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T L + + E K + YLV L ++L E+ I+F + H + FG
Sbjct: 476 KTVVTLTQEFVRLRPGREEK-RMGYLVYLCKNLYTERVIIFFRQKKIAHHARII---FGL 531
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L + E G Q R ++++AFR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 532 LGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLE 591
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ G TL + + K K ++ I S
Sbjct: 592 IYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISS 637
>gi|154420635|ref|XP_001583332.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121917573|gb|EAY22346.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 449
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 195/451 (43%), Gaps = 101/451 (22%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVRCLRALVVLPTRDLALQ 116
V ETI L +D+C + TGSGK++++ +PIVQ L + R + +AL++ PTR+LA Q
Sbjct: 33 VQAETIPKILSGQDICATAITGSGKSMAFLIPIVQKLLTFRGLPGPKALIMSPTRELAQQ 92
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVG 176
+ K C D+ AA ++ L +G
Sbjct: 93 L-----KAVC-------------------------------DMLAA---HCAITSTLVIG 113
Query: 177 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 236
++DE + P A DI++ TPGR +D I + LEH
Sbjct: 114 --GVSDEEQRELLTP-------------------APDIIIGTPGRFIDSIFNAKVLKLEH 152
Query: 237 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 296
L + V+DE DRLL + +++ L T++ ++ A+ L L T +
Sbjct: 153 LQFFVLDEADRLLGKGFESQLNTIVSQLPEKHQTLLFTAT--LNDQVAKLATKIQKKSSE 210
Query: 297 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESK 356
PY M L+ +TQ +F+ T + +LP
Sbjct: 211 KISINPY-----MELNPNITQ-------------MFIKTKKEERRLP------------- 239
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 416
YLVAL +++ ++K +VF + H + L + G I E Q+ R++
Sbjct: 240 ----YLVALCRNMCKDKTLVFFPTKALAHHVFLLFKNLG---IASAELHADLSQTARNEA 292
Query: 417 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 476
++ FRE K+Q L++SD RG+D+ + V+N+ P ++ YIHR GRT RAG+ G +
Sbjct: 293 IEQFRESKVQYLLASDLAARGIDIPDIEYVINFTIPNELERYIHRTGRTGRAGKKGTAIS 352
Query: 477 LLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 507
+ E KR K +QK +IP +L
Sbjct: 353 MYVTPEEKRVMKKMQKNSPGEVQFMTIPDNL 383
>gi|359473682|ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Vitis vinifera]
Length = 436
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 200/445 (44%), Gaps = 107/445 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+G + +Q E I L +DL + TGSGKT ++ALPI+Q L + +
Sbjct: 23 ACENLGWKTPSKIQA----EAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLDTP-QV 77
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L A V+ PTR+LA+Q IAE F
Sbjct: 78 LFACVLSPTRELAIQ---------------------IAEQ------------------FE 98
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ +GL + VG + L KRP I+V T G
Sbjct: 99 ALGSGIGLKCAVLVGGVDHTQQAIALAKRP---------------------HIVVGTLGX 137
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
LMDH++ T+GF+L + YLV+DE DRLL + ++ + +L + +P
Sbjct: 138 LMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEIL---------------SVIPQ 182
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
ER K Y + SAT+T+ KL + L +P+ + G ++Y
Sbjct: 183 -------------ER----KTY------LFSATMTKKVRKLQRACLRNPVKIEAG-SKYS 218
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L+ +K K YLV +L L +VFT + ++T L LL + G I I
Sbjct: 219 TVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLGAIPI 278
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
SG Q+ R L F+ G+ +L+ +D +RG+D+ V+ V+NYD P+ K YIHR
Sbjct: 279 ---SGHMSQTKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHR 335
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRF 486
GRTA AG+ G +L+++ E++ +
Sbjct: 336 VGRTAHAGRSGVAISLVNQYELEWY 360
>gi|261191654|ref|XP_002622235.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
gi|239590001|gb|EEQ72644.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis SLH14081]
Length = 847
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 158/333 (47%), Gaps = 87/333 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQ 92
L+ L LQ G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V
Sbjct: 267 LNKNLISILQKRGYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVA 325
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ + LR LVV+PTR+L Q A C+ C
Sbjct: 326 GIEQLPLARLRGLVVVPTRELVKQARDA-CELC--------------------------- 357
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAG 196
A GL +G AVG +S+ +E + LIK +L E+
Sbjct: 358 -----------ATRTGLRIGTAVGTASLKEEQALLIKHDQLYSPSNRRIGNGHQMIAESW 406
Query: 197 ICYDPEDVLQELQSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVV 242
++ ++ + E++ + +DIL+ TPGRL+DHI +T+GF+LEHL +LV+
Sbjct: 407 ASFNFQEYITEVERSHSAFPDHVTTPSPNIDILICTPGRLVDHIRSTKGFSLEHLEWLVI 466
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL E++Q W+ V+ + + LP + C
Sbjct: 467 DEADRLLNESFQEWVEVVIPALERVRVDVAGKSGRILPDLGWQI-----C---------- 511
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
PRL K++LSAT+T+D KL L L +P ++T
Sbjct: 512 KPRLRKIILSATMTRDIAKLNSLRLQNPKLVST 544
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 374 CIVFTSSVESTHRLCTLL--------NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 425
+VFT S ES RL LL N G L + + S KT+ A+R GK+
Sbjct: 674 VLVFTKSSESASRLARLLVLMHPPFANRIGTL-------AKSSKSSTSRKTISAYRNGKL 726
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
+++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +TL+ E +
Sbjct: 727 SIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAWTLVAHREGRW 786
Query: 486 FKKLLQKADNDSCP 499
F + K CP
Sbjct: 787 FANEIVK-----CP 795
>gi|119616690|gb|EAW96284.1| hCG27698, isoform CRA_d [Homo sapiens]
Length = 392
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 42/276 (15%)
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 82 IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK---- 137
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
TFL SAT+T+ KL + L +P+
Sbjct: 138 ---TFL-------------------------------FSATMTKKVQKLQRAALKNPVKC 163
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL +
Sbjct: 164 AVS-SKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 222
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D P
Sbjct: 223 LGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPT 279
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+ K YIHR GRTARAG+ G+ T + + +V+ F+++
Sbjct: 280 HSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 315
>gi|60649461|gb|AAH91696.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
Length = 323
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 141/276 (51%), Gaps = 42/276 (15%)
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 13 IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK---- 68
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
TFL SAT+T+ KL + L +P+
Sbjct: 69 ---TFL-------------------------------FSATMTKKVQKLQRAALKNPVKC 94
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL +
Sbjct: 95 AVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 153
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D P
Sbjct: 154 LGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPT 210
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+ K YIHR GRTARAG+ G+ T + + +V+ F+++
Sbjct: 211 HSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 246
>gi|353232410|emb|CCD79765.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 603
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 87/362 (24%)
Query: 2 EEAKKKS---MPVLP-WMRSP--VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
E+ K K+ VLP W+ P L + ++ + + L++ L +GI+ FPVQ
Sbjct: 20 EKTKSKAHNVQEVLPFWITKPELFSSDLKQSLSVNEVAKIGEFLRLRLSEIGITHFFPVQ 79
Query: 56 VAV--------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
AV + P RD+CI +PTGSGKTL+YA+PI+Q NR R +RAL++
Sbjct: 80 SAVIPYMLDCYFTSKHRPLCRPRDICICAPTGSGKTLAYAVPIIQLFLNRVHRFIRALII 139
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+P RDLA+QV F+ +
Sbjct: 140 VPVRDLAVQVYKT---------------------------------------FSQLVNGT 160
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
+ VG+ G S + E ++I + VDI++ATPGRL+DH+
Sbjct: 161 DIQVGVLAGIKSFSKEQEDIINLTNESYSV-------------KVDIVIATPGRLVDHLY 207
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL----TRSDNENRFSDASTFLPSAF 283
T GF++E L LV+DE DR++ E Q W T+ + T S N+N +S+ S S
Sbjct: 208 NTPGFSMERLRILVIDEADRVIVEEKQNWYHTLEDVLYYYTSSTNQNSWSNVSVRKRS-- 265
Query: 284 GSLKTIRRCGVERGFKDKPYPR-----LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
+ I G Y R L K+++SATLT DP L Q +L+ P+ T+
Sbjct: 266 ---RPIPTVGYH-------YDRSVDITLQKILVSATLTHDPEPLKQFNLYFPILFTSNRI 315
Query: 339 RY 340
R+
Sbjct: 316 RH 317
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
T G ++ +PE LE + + + ++ L+LV L++ +++ + F ++V+ RL LL
Sbjct: 366 TAGVGQFMVPESLEEFLVTAKPDIRVLFLVYLVRQKHKKRILCFANTVDCAKRLNMLLAS 425
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
F IK K S R + L F G+ Q+LV +D+M RG+D+ V VV+YD P
Sbjct: 426 FKG--IKSKFLSSHLHPDKRQRILNLFSVGQCQILVCTDSMARGIDINDVECVVSYDVPP 483
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
IK YIHR GRTARAG+ G + LL ++ FKK L+ A
Sbjct: 484 SIKIYIHRIGRTARAGKKGTAYNLLSTNQFYHFKKDLKLA 523
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 208/465 (44%), Gaps = 109/465 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L + S+ P+Q ++TI L +D+ ++ TGSGKT ++ +PI++ L R V
Sbjct: 328 GLAGVNFSNPTPIQ----RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKV 383
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 384 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 419
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 420 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 443
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 444 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 488
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P S +T M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 489 PK---SRQT--------------------MLFSATMTDTVDKLIRVGLNRPVRLMVDAKK 525
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
++ + +L + K L YL+ L + L + IVF + HR+ + FG L
Sbjct: 526 NTAVTLVQEFVRLRPGREDKRLGYLLYLCKELYTGRVIVFFRQKKEAHRVRII---FGLL 582
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FREGK L+++D +RG+D++GV V+NY+ P +
Sbjct: 583 GLKAAELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEI 642
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ GR T+ + + K K ++ + I S
Sbjct: 643 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIAS 687
>gi|218186850|gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indica Group]
Length = 802
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 203/457 (44%), Gaps = 111/457 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR- 100
A + +G P+Q A I L RD+C ++ TGSGKT +++LP+++ L R R
Sbjct: 208 ACEALGYQKPTPIQAAC----IPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRV 263
Query: 101 -CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L++ PTR+LA V HS+ E QF +
Sbjct: 264 PAIRVLILTPTRELAAPV------------------HSMIEKLAQFTDIRCC-------- 297
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L VG G S+ E++ L+S DI+VATP
Sbjct: 298 ---------LIVG---GLSTKVQEVA----------------------LRSMPDIVVATP 323
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH+ + LE L L++DE DRLL + A + +
Sbjct: 324 GRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQEL------------------- 364
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
IR C P R M+ SAT+T++ N+L L L+ P+ L +
Sbjct: 365 ---------IRMC---------PRRRQT-MLFSATMTEEINELVTLSLNKPVRLEADPSL 405
Query: 340 YK---LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ L E + + E+ + + L L++ ++K I+F+ + S HRL + FG
Sbjct: 406 KRPATLTEEVVRIRRAREANQEAVLLALCLKTF-KDKVIIFSGTKHSAHRLKII---FGL 461
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+K E G Q+ R + L+ F++ ++ L+++D RG+D+ GV V+N+ P +
Sbjct: 462 SGMKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDAR 521
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
TY+HR GRTARAG+ G T + D+ K + +KA
Sbjct: 522 TYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKA 558
>gi|157125871|ref|XP_001654429.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108873494|gb|EAT37719.1| AAEL010317-PA [Aedes aegypti]
Length = 804
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 212/468 (45%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---SNRAVRCLRALVVLP 109
P+Q A TI L RD+C + TG+GKT +Y LP ++ L + A R LV++P
Sbjct: 206 PIQAA----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYKPSAAQAVTRVLVLVP 261
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
TR+L QV + +++ QF S+
Sbjct: 262 TRELGAQV------------------YQVSKQLTQFTSI--------------------- 282
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
VG+A+G G+ ++ + L++ D+++ATPGRL+DHI T
Sbjct: 283 EVGIAIG-------------------GLDVKAQEAV--LRTNPDVVIATPGRLIDHIKNT 321
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F+L+ + L++DE DR+L E + + ++Q S
Sbjct: 322 PSFSLDSIEVLILDEADRMLDEYFAEQMKEIIQ----------------------SCSKT 359
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGET-RYKLPERL 346
R+ M+ SAT+T LA + L P+ F+ +T + L +
Sbjct: 360 RQT----------------MLFSATMTDQVKDLAAVSLTKPVKVFVNNNQTVAFNLRQEF 403
Query: 347 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 406
+ E+ +PL L AL+ + C+VF + ++ HRL LL L +K E G
Sbjct: 404 IRIREGREADREPL-LAALICRTFHDHCMVFVQTKKTAHRLRILLGL---LGVKSGELHG 459
Query: 407 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 466
QS R ++LK F++ ++ VL+++D RG+D+ GV V+N+ P ++ YIHR GRTA
Sbjct: 460 DLTQSQRLESLKQFKDEQVDVLIATDVAARGLDISGVKTVINFVMPITMEHYIHRVGRTA 519
Query: 467 RAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
RAG+ G +L + E K K +++ A P+ + IP+ +++ R
Sbjct: 520 RAGKAGVSVSLAGELERKIVKDIIKNA---VSPVKNRIIPTEIVDKYR 564
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 194/437 (44%), Gaps = 107/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P+QV E I L RD+ + TGSGKT +++LPI+Q L + AL++ PTR+
Sbjct: 71 PIQV----EAIPSALQGRDVIGLAQTGSGKTAAFSLPILQKLWENP-QPFFALILAPTRE 125
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ Q SL +G+
Sbjct: 126 LAYQISQ------------------------QVTSL---------------GSPLGVRTA 146
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L KRP ++VATPGRLMDH+ T+GF
Sbjct: 147 VIVGGMDMMSQSIALSKRPH---------------------VIVATPGRLMDHLENTKGF 185
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+++ +LV+DE DRLL + + +L++ + +T+L
Sbjct: 186 SLKNVKFLVMDEADRLLDMDFGPIIDKILKVIPKER-------NTYL------------- 225
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T KL + L+ P+ + T+Y L + L+
Sbjct: 226 ------------------FSATMTTKVAKLQRASLNKPVRVEVA-TKYSTVSTLLQHYLL 266
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K +L+ ++ L I+FT +V RL +L G I + G QS+
Sbjct: 267 LPLKAKDTHLLYIVTELSSCSMIIFTRTVVDAQRLSIMLRRLGFPAIPLH---GQMSQSL 323
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ G +LV++D +RG+D+ V+ VVNYD P K Y+HR GRTARAG+ G
Sbjct: 324 RLASLNKFKSGGRSILVATDVASRGLDIPLVDLVVNYDMPINSKDYVHRVGRTARAGRSG 383
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T++ + +V+ +++
Sbjct: 384 KSITMVTQYDVEILQRI 400
>gi|365759503|gb|EHN01286.1| Drs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 737
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 194/448 (43%), Gaps = 111/448 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L N+G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 226 PVLK-GLANLGYVMPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 280
Query: 97 RAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + R +V+LPTR+LALQV A++ Q
Sbjct: 281 KPAKIASTRVIVLLPTRELALQV---------------------ADVGKQI--------- 310
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
A P++ + GLAVG ++ + L RP DI
Sbjct: 311 ------ARFVPSI--TFGLAVGGLNLRQQEQMLKSRP---------------------DI 341
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGR +DHI + F ++ + LV+DE DR+L E +Q L ++ L S +N
Sbjct: 342 VIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSSRQN---- 397
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
++ SAT+ L L L P+ +
Sbjct: 398 ----------------------------------LLFSATMNSKIKSLVSLSLKRPVRIM 423
Query: 335 TGETRYKLPERLESY-KLICESKLKPLYLVALLQSL---GEEKCIVFTSSVESTHRLCTL 390
+ + + + ++ LKP + L++ L +++ +VF + ES HRL +
Sbjct: 424 IDPPKKAATKLTQEFVRIRKRDHLKPALIFNLIRKLDPMAQKRIVVFVARKESAHRLRII 483
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
+ G L + + E G Q R ++ F+ ++ VL+ +D +RG+D+ + V+NYD
Sbjct: 484 M---GLLGMSVGELHGSLTQEQRLDSVSKFKNLEVPVLICTDLASRGLDIPKIEVVINYD 540
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLL 478
P + Y+HR GRTARAG+ GR T +
Sbjct: 541 MPKSHEVYLHRVGRTARAGREGRSVTFV 568
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 192/438 (43%), Gaps = 106/438 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I L +D+ + TGSGKT ++ALPI+Q L + L A V+ PTR+LA Q+
Sbjct: 41 IQTEVIPHALEGKDIIGVASTGSGKTAAFALPILQKLWEEP-KGLFACVLAPTRELAYQI 99
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ QF+SL +G+ + VG
Sbjct: 100 SQ------------------------QFESL---------------GSDMGVRCAVIVGG 120
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ L K+P ++VATPGRL+ H+ T+GF L +L
Sbjct: 121 VPTVPQAVALAKKPH---------------------VVVATPGRLLWHLQETKGFGLANL 159
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LV+DE DRLL + + +L++ +T+L
Sbjct: 160 KFLVLDEADRLLDMDFGQVIDDILKVIPKQR-------TTYL------------------ 194
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L +P+ + +Y+ L Y L K
Sbjct: 195 -------------FSATMTSKVAKLQRASLKNPVRVEVA-GKYQTVSTLLQYYLFIPLKD 240
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K + LV L+ +L + I+FT +V RL +L G + + G QS R L
Sbjct: 241 KDVNLVYLVNALAQNSIIIFTRTVHDAARLTIVLRTLGFSAVPLH---GQLSQSQRLGAL 297
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G ++LV++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ TL
Sbjct: 298 AKFKSGGRKILVATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRSGKSITL 357
Query: 478 LHKDE---VKRFKKLLQK 492
+ + + V+R + +++K
Sbjct: 358 VTQYDVELVQRIESVIEK 375
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 207/465 (44%), Gaps = 109/465 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L + S+ P+Q ++TI L +D+ ++ TGSGKT ++ +PI++ L R V
Sbjct: 296 GLAGVNFSNPTPIQ----RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKV 351
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 352 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 387
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 388 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 411
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 412 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 456
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 457 PKSRQT-----------------------MLFSATMTDTVDKLIRVGLNRPVRLMVDAKK 493
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
++ + +L + K L YL+ L + + + IVF + HR+ + FG L
Sbjct: 494 NTAVTLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRII---FGLL 550
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FREGK L+++D +RG+D++GV V+NY+ P +
Sbjct: 551 GLKAAELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEI 610
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ GR T+ + + K K ++ + I S
Sbjct: 611 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIAS 655
>gi|396488909|ref|XP_003842973.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
gi|312219551|emb|CBX99494.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
Length = 811
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 200/463 (43%), Gaps = 109/463 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L +G S P+Q + I + +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 294 GLAAVGFSEPTPIQ----NKAIPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRPKKV 349
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R + +PTR+LA+Q C N+ A F + F
Sbjct: 350 PTTRVAIFMPTRELAVQ---------CFNV---------ATKLASFTDITF--------- 382
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L G S D+ + L RP D+++ATP
Sbjct: 383 ------------ALMAGGFSTKDQEAVLKTRP---------------------DVVIATP 409
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH++ T F +EHL LV+DE DR+L E +++ L +L T +
Sbjct: 410 GRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEIL---------------TTI 454
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P S +T M+ SAT+T ++L ++ + P+ L +
Sbjct: 455 PK---SRQT--------------------MLFSATMTSTVDRLIRIGMDKPVRLMVDAKK 491
Query: 340 YKLPERLESYKLICESK--LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + + + + + K + YL+ + + E+ I+F + HR+ + G
Sbjct: 492 HTVKGLTQEFIRLRQGKEDRRLAYLMYICEKFYNERVIIFFRQKKEAHRVRVVFALCG-- 549
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R + ++AFR GK L+++D +RG+D++ V+ V+NY+ P
Sbjct: 550 -LKASELHGNMSQEQRIQAVEAFRSGKSAYLLATDVASRGLDIKNVSTVINYEAPQTHDI 608
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 500
Y+HR GRTARAG+ GR TL + + K K+ ++ A + +
Sbjct: 609 YMHRVGRTARAGREGRACTLAAEPDRKVVKQAVKAARDQGAKV 651
>gi|256075757|ref|XP_002574183.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 837
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 162/362 (44%), Gaps = 87/362 (24%)
Query: 2 EEAKKKS---MPVLP-WMRSP--VDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
E+ K K+ VLP W+ P L + ++ + + L++ L +GI+ FPVQ
Sbjct: 20 EKTKSKAHNVQEVLPFWITKPELFSSDLKQSLSVNEVAKIGEFLRLRLSEIGITHFFPVQ 79
Query: 56 VAV--------WQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVV 107
AV + P RD+CI +PTGSGKTL+YA+PI+Q NR R +RAL++
Sbjct: 80 SAVIPYMLDCYFTSKHRPLCRPRDICICAPTGSGKTLAYAVPIIQLFLNRVHRFIRALII 139
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+P RDLA+QV F+ +
Sbjct: 140 VPVRDLAVQVYKT---------------------------------------FSQLVNGT 160
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
+ VG+ G S + E ++I + VDI++ATPGRL+DH+
Sbjct: 161 DIQVGVLAGIKSFSKEQEDIINLTNESYSV-------------KVDIVIATPGRLVDHLY 207
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPT----VLQLTRSDNENRFSDASTFLPSAF 283
T GF++E L LV+DE DR++ E Q W T + T S N+N +S+ S S
Sbjct: 208 NTPGFSMERLRILVIDEADRVIVEEKQNWYHTLEDVLYYYTSSTNQNSWSNVSVRKRS-- 265
Query: 284 GSLKTIRRCGVERGFKDKPYPR-----LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
+ I G Y R L K+++SATLT DP L Q +L+ P+ T+
Sbjct: 266 ---RPIPTVGYH-------YDRSVDITLQKILVSATLTHDPEPLKQFNLYFPILFTSNRI 315
Query: 339 RY 340
R+
Sbjct: 316 RH 317
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
T G ++ +PE LE + + + ++ L+LV L++ +++ + F ++V+ RL LL
Sbjct: 366 TAGVGQFMVPESLEEFLVTAKPDIRVLFLVYLVRQKHKKRILCFANTVDCAKRLNMLLAS 425
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
F IK K S R + L F G+ Q+LV +D+M RG+D+ V VV+YD P
Sbjct: 426 FKG--IKSKFLSSHLHPDKRQRILNLFSVGQCQILVCTDSMARGIDINDVECVVSYDVPP 483
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
IK YIHR GRTARAG+ G + LL ++ FKK L+ A
Sbjct: 484 SIKIYIHRIGRTARAGKKGTAYNLLSTNQFYHFKKDLKLA 523
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 187/437 (42%), Gaps = 105/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+ ++ P+Q + I L RD+ + TGSGKT ++ LPI+Q L + +
Sbjct: 103 ACENLKFTNPTPIQA----QAIPLALQGRDVIGLAETGSGKTAAFVLPILQALLEKQ-QS 157
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L L++ PTR+LA Q+ Q D+L I
Sbjct: 158 LFGLILAPTRELAYQI------------------------AQQVDALGSI---------- 183
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ + VG + + L K+P I+VATPGR
Sbjct: 184 -----INVKCATLVGGMDMVPQAIALSKKPH---------------------IIVATPGR 217
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L+HL Y+V+DE DRLL + L +L++ + + +
Sbjct: 218 LLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLPREGRHTY--------- 268
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
+ SAT++ L + L +P+ ++ + ++
Sbjct: 269 ----------------------------LFSATMSSKVESLQRAALQNPVRVSISSSSHQ 300
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L + K K LYL+ LL I+F+ +V T R+ LL G I +
Sbjct: 301 VVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPL 360
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L F+ +LV++D RG+D+ V+ VVN+D P+ +TY+HR
Sbjct: 361 H---GQLSQSARLGALNKFKTQSRDILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHR 417
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G+ + +
Sbjct: 418 VGRTARAGKSGKAVSFV 434
>gi|429859431|gb|ELA34212.1| ATP-dependent RNA helicase drs1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 772
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 207/465 (44%), Gaps = 109/465 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L +G S P+Q +T+ L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 263 GLAAVGFSKPTPIQA----KTVPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKV 318
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++ PTR+LA+Q C H++A + + F
Sbjct: 319 PTSRVVILTPTRELAIQ---------C---------HAVATKLAAYTDIKFT-------- 352
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + EL RP D+++ATP
Sbjct: 353 -------------LAVGGLSLKQQEVELRLRP---------------------DVIIATP 378
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F ++ + LV+DE DR+L + + L +L T L
Sbjct: 379 GRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEIL---------------TTL 423
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P S +T M+ SAT+T ++L ++ ++ P + +
Sbjct: 424 PK---SRQT--------------------MLFSATMTSSVDRLVRVGMNKPARVMVDSQK 460
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K + YL+ + +++ E+ I+F + HR + FG L
Sbjct: 461 KTVGTLVQEFIRLRPGREEKRMGYLIHICKTMHTERVIIFFRQKKEAHRARII---FGML 517
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 518 GMSCAELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQKLEI 577
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ G TL + + K K ++ + I S
Sbjct: 578 YVHRVGRTARAGRSGVAVTLAAEPDRKVVKAAVKAGKSQGAKIMS 622
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 192/448 (42%), Gaps = 106/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A MG + P+Q E+I L RD+ + TGSGKT S+ LPI+Q L +
Sbjct: 86 ACDKMGYKAPTPIQ----SESIPLALQGRDIIGLAETGSGKTASFVLPILQALMEKP--- 138
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
+ FGL+
Sbjct: 139 -------------------------QPFFGLV---------------------------- 145
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+AP L+ +++ S+ I+ ++ L G+ P+ + L I+VATPGR
Sbjct: 146 -MAPTRELAYQISLACESLGATIN--VRSTTLVGGMDMVPQSI--ALGKKPHIIVATPGR 200
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L +LV+DE DRLL + L +L++ E R TFL
Sbjct: 201 LLDHLENTKGFSLRNLKFLVMDEADRLLDMDFGPILDKILKVL--PRERR-----TFL-- 251
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SATL+ L + L +P ++ ++Y
Sbjct: 252 -----------------------------FSATLSSKVESLQRASLSNPARVSISSSKYA 282
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
E L+ ++ K K +YLV LL + I+F +V T R+ LL G I +
Sbjct: 283 TVETLQQTYILRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPL 342
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR ++LV++D RG+D+ V+ V+N+D P KTYIHR
Sbjct: 343 H---GQMSQSARLGALGKFRSKSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHR 399
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G + + + +V+ ++++
Sbjct: 400 VGRTARAGKSGTAISFVTQYDVEIWQRI 427
>gi|212533429|ref|XP_002146871.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
gi|210072235|gb|EEA26324.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
Length = 826
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 194/445 (43%), Gaps = 119/445 (26%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G + P+Q ++ I L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 318 GLAAVGFTKPTPIQ----RKAIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRQRKV 373
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ +A ++ C
Sbjct: 374 PTSRVAILMPTRELAVQ---------CFNVATKLATYTDITFC----------------- 407
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+G S+ ++ + L KRP DI++ATP
Sbjct: 408 -------------QLIGGFSLREQENILKKRP---------------------DIIIATP 433
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 434 GRFIDHMRNSSSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 478
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 479 PKSRQT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDAKK 515
Query: 340 YKLPERLESYKLICESKLKP-------LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
++ + +L+P L+ L Q + + I+F + HR+ +
Sbjct: 516 QTAGTLVQEF-----VRLRPGREDKRLASLIHLCQQVYTSRVIIFFRQKKEAHRVRVIFG 570
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
FG +K E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P
Sbjct: 571 LFG---LKAAELHGSMSQEQRIKSVEDFRDGKVAFLLATDVASRGLDIKGVETVINYEAP 627
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTL 477
+ Y+HR GRTARAG+ GR TL
Sbjct: 628 QTHEIYLHRVGRTARAGRSGRACTL 652
>gi|145300478|ref|YP_001143319.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362912|ref|ZP_12963530.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142853250|gb|ABO91571.1| ATP-dependent RNA helicase, DEAD box family [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356685918|gb|EHI50537.1| DEAD-box ATP dependent DNA helicase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 417
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 190/460 (41%), Gaps = 111/460 (24%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L PRL+ L +G ++ P+Q I L RDL + TG+GKT ++ LP+++
Sbjct: 10 ALSPRLQQTLSELGYAAPTPIQA----RAIPVILTGRDLMAGAQTGTGKTAAFVLPLLEQ 65
Query: 94 L----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
L ++ R +RALV++PTR+LA+QV + +Y
Sbjct: 66 LMQHPASDTARPIRALVLVPTRELAVQVFDSVVRY------------------------- 100
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
GL+ L G SIA ++ + LQ
Sbjct: 101 --------------GQGTGLTSALVYGGVSIAAQV---------------------EALQ 125
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
+ VD+L+ATPGRL+DH+ +LEHL +LV DE DR+L + + +L+ +D +
Sbjct: 126 AGVDLLIATPGRLLDHLRQG-ALSLEHLSHLVFDEADRMLDMGFMDEIKALLKQIPADRQ 184
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
A T + F + + R P L+++ P ++
Sbjct: 185 TLLFSA-TCDDNLFALSRVLLRD-----------PELIEVA--------PRNTTAAEVEQ 224
Query: 330 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
++ GE + L E L K G ++F+ + + +L
Sbjct: 225 RVYAVDGERKVALVEHLIKVK-------------------GWAPVLIFSRTRQGADKLA- 264
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
G+ I + G Q R K L AFR G +Q LV++D RG+D+ +N V+N
Sbjct: 265 --QQLGKAGINALAFHGDLSQGAREKVLLAFRAGTLQALVATDVAARGLDILDLNYVINL 322
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+ P + Y+HR GRT RAG G TL ++ +K+
Sbjct: 323 EFPFVAEDYVHRIGRTGRAGNKGLAITLFSPEDAPLLEKV 362
>gi|66814184|ref|XP_641271.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
gi|74897202|sp|Q54VT4.1|DDX47_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx47; AltName:
Full=DEAD box protein 47
gi|60469306|gb|EAL67300.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
Length = 546
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 186/432 (43%), Gaps = 103/432 (23%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ +E+I L RD+ + TGSGKT ++ +P++Q L A + L L + PTR+LA Q+
Sbjct: 145 IQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQKLL-EAPQGLFCLALAPTRELAYQI 203
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
D F AI +G+ + VG
Sbjct: 204 ---------------------------------------ADQFNAIGSTIGVKTCVLVGG 224
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ L K+P ++V +PGR++ H+ T+GF L +
Sbjct: 225 IDSMSQSLALAKKPH---------------------VVVGSPGRVLHHLEHTKGFNLRSI 263
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
Y ++DE DRL ++ + +L++ + +T+L
Sbjct: 264 KYFIMDEADRLFSADFEEEVNNILKVIPKER-------NTYL------------------ 298
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T KL + L +P+ + ++Y+ + L L K
Sbjct: 299 -------------FSATMTSKVAKLQRASLVNPVKVQVA-SKYQTVDTLLQQYLFVPFKY 344
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YL +L L I+FTS+ S+ ++ +L + G I I +G Q R +L
Sbjct: 345 KDCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPI---NGDMDQGKRLASL 401
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F++G +LV++D RG+D+ V+ V+NYD P K Y+HR GRTARAG GR T+
Sbjct: 402 NKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITI 461
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 462 VTQYDVEMYQRI 473
>gi|342889281|gb|EGU88436.1| hypothetical protein FOXB_01039 [Fusarium oxysporum Fo5176]
Length = 797
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 215/477 (45%), Gaps = 111/477 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AV 99
L +G S P+Q ++I L +DL + TGSGKT ++ +PI++ L R +
Sbjct: 272 GLATVGFSKPTPIQA----KSIPIALMGKDLVGGAVTGSGKTGAFIVPILERLLYRPKKI 327
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +V+ PTR+LA+Q C H++A F + F
Sbjct: 328 PTTRVVVLTPTRELAIQ---------C---------HAVATKLAAFTDIKFT-------- 361
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
LAVG S+ + EL RP D+++ATP
Sbjct: 362 -------------LAVGGLSLKAQEVELKLRP---------------------DVIIATP 387
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + F+++ + +V+DE DR+L + + L +L T L
Sbjct: 388 GRFIDHMRNSASFSVDTVEIMVLDEADRMLEDGFADELNEIL---------------TTL 432
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P S +T M+ SAT+T ++L ++ L+ P + +
Sbjct: 433 PK---SRQT--------------------MLFSATMTSTVDRLIKIGLNKPARVMVDSQK 469
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K + YL + ++L +E+ I+F + HR + FG L
Sbjct: 470 KTVTTLVQEFVRLRPGREEKRMGYLAHVCKNLYKERVIIFFRQKKEAHRARII---FGLL 526
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ E G Q+ R +++ FR+GK+ L+++D +RG+D++GV+ V+NY+ P ++
Sbjct: 527 GLSCAELHGSMNQTQRISSVEDFRDGKVAYLLATDLASRGLDIKGVDTVINYEAPQSLEI 586
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
Y+HR GRTARAG+ G TL + + K K ++ I S I ++ +++L+
Sbjct: 587 YVHRVGRTARAGRKGTALTLASETDRKVVKAAVKAGKAQGAKIVSRQIEAAEVDALQ 643
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 187/437 (42%), Gaps = 105/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +N+ ++ P+Q + I L RD+ + TGSGKT ++ LPI+Q L + +
Sbjct: 103 ACENLKFTNPTPIQA----QAIPLALEGRDVIGLAETGSGKTAAFVLPILQALLEKQ-QS 157
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L L++ PTR+LA Q+ Q D+L I
Sbjct: 158 LFGLILAPTRELAYQI------------------------AQQVDALGSI---------- 183
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ + VG + + L K+P I+VATPGR
Sbjct: 184 -----INVKCATLVGGMDMVPQAIALSKKPH---------------------IIVATPGR 217
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L+HL Y+V+DE DRLL + L +L++ + + +
Sbjct: 218 LLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLPREGRHTY--------- 268
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
+ SAT++ L + L +P+ ++ + ++
Sbjct: 269 ----------------------------LYSATMSSKVESLQRAALQNPVRVSISSSSHQ 300
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L + K K LYL+ LL I+F+ +V T R+ LL G I +
Sbjct: 301 VVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPL 360
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L F+ +LV++D RG+D+ V+ VVN+D P+ +TY+HR
Sbjct: 361 H---GQLSQSARLGALNKFKTQSRDILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHR 417
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G+ + +
Sbjct: 418 VGRTARAGKSGKAVSFV 434
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 208/465 (44%), Gaps = 109/465 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L + S+ P+Q ++TI L +D+ ++ TGSGKT ++ +PI++ L R V
Sbjct: 323 GLAGVNFSNPTPIQ----RKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKV 378
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 379 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 414
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 415 ---------------VGGFSLREQENILKKRP---------------------DVIIATP 438
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 439 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 483
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P S +T M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 484 PK---SRQT--------------------MLFSATMTDTVDKLIRVGLNRPVRLMVDAKK 520
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
++ + +L + K L YL+ L + + + IVF + HR+ + FG L
Sbjct: 521 NTAVTLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRII---FGLL 577
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FREGK L+++D +RG+D++GV V+NY+ P +
Sbjct: 578 GLKAAELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEI 637
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
Y+HR GRTARAG+ GR T+ + + K K ++ + I S
Sbjct: 638 YLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIAS 682
>gi|315043800|ref|XP_003171276.1| ATP-dependent RNA helicase dbp6 [Arthroderma gypseum CBS 118893]
gi|311345065|gb|EFR04268.1| ATP-dependent RNA helicase dbp6 [Arthroderma gypseum CBS 118893]
Length = 813
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 172/377 (45%), Gaps = 108/377 (28%)
Query: 43 LQNMGISSLFPVQVAVWQE-TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L++ G + PVQ AV GP + D+C+++ TGSGKTL+Y LP+ L V
Sbjct: 233 LKDKGYTEALPVQSAVIPLLAKGPTRYTGDICVSAATGSGKTLAYVLPLFAGLKRLPVAK 292
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LRA++++PTR+L QV A C+ C
Sbjct: 293 LRAVIIVPTRELVKQVRDA-CELC------------------------------------ 315
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIK-----RPKLEAGIC----------------YD 200
A GL +G AVG +++ DE ++++K RP+ C Y
Sbjct: 316 --ASGSGLRIGTAVGSTALKDEQTQIMKQTRMYRPESTGSQCDREMTADEWASFSLTDYI 373
Query: 201 PE---------DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLRE 251
E D + E VDIL+ TPGRL+DHI +T+GF L+ L +L++DE DRLL E
Sbjct: 374 AEAEEYSKTLPDHVIEWSPCVDILICTPGRLVDHIRSTKGFILDSLEWLIIDEADRLLNE 433
Query: 252 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP----RLV 307
++Q W+ TVL + ++ + G L+ + +GF +P L
Sbjct: 434 SFQEWVETVLPALDTKEQS----------TTTGPLQQL-----TKGFS---FPLGSRNLQ 475
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLT-----------TGET----RYKLPERL-ESYKL 351
K++LSAT+T+D KL L LH+P + GET LP L ES
Sbjct: 476 KVILSATMTRDITKLNSLRLHNPKLVVVDGADMNDATRNGETGPDSNITLPSLLDESLIP 535
Query: 352 ICESKLKPLYLVALLQS 368
+ + KPLYL+ LLQ+
Sbjct: 536 VGDGSEKPLYLLKLLQT 552
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 374 CIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S E+ RL LL + L K+ + S + + F++GKIQ++V++D
Sbjct: 636 VLIFTKSSEAASRLSRLLALMYPYLDGKVGTLIKSNKSSTSRRAISGFQKGKIQIIVATD 695
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+RG+D+ ++N++NYD P + TY+HR GRTARAG+ G ++L+ E + F
Sbjct: 696 RASRGLDLPLLDNIINYDIPNSLTTYVHRVGRTARAGRPGSAWSLVTHSEGRWF 749
>gi|418246876|ref|ZP_12873265.1| hypothetical protein KIQ_15363 [Corynebacterium glutamicum ATCC
14067]
gi|354509072|gb|EHE82012.1| hypothetical protein KIQ_15363 [Corynebacterium glutamicum ATCC
14067]
Length = 448
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 190/454 (41%), Gaps = 111/454 (24%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
L++ GI+ FP+Q A + L +D+ PTGSGKT ++ LP++ L+
Sbjct: 17 LRSQGITEAFPIQEAAIPDA----LAGKDVLGRGPTGSGKTFTFGLPMITRLARSGASKP 72
Query: 103 ---RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LV++PTR+LA Q V++
Sbjct: 73 GRPRGLVLVPTRELAAQ---------------------------------------VRER 93
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
A +GL V VG +I I+ L + VDILVATP
Sbjct: 94 LDDPARVMGLRVLEVVGGVNINRNITALA---------------------TPVDILVATP 132
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR D IN + +L + +DE D++ + + ++ LT + +
Sbjct: 133 GRAQDLINQKK-LSLADVSVTALDEADQMADMGFLPQVKKLMDLTPKNGQ---------- 181
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+++ SATL D +KL LH+P+ +T +
Sbjct: 182 ----------------------------RLLFSATLDGDVSKLVDRYLHNPITHSTAPVQ 213
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
+ + +E Y+L+ + P V L + E K I+F + R L G +
Sbjct: 214 AAV-DTMEHYRLLVGGR-DPRNSVVLSIAAREGKTIMFMRTKHGVDRQVKKLRRVGVNAV 271
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
I G QS R+ L F +G I VLV++D RG+DV+ V+ VV+ D PA K Y+
Sbjct: 272 GIHGDKG---QSTRTNALAGFADGSIPVLVATDIAARGIDVDDVSLVVHVDPPAEHKAYL 328
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
HRAGRTARAG G TL+ +++K ++L QKA
Sbjct: 329 HRAGRTARAGTSGTVVTLVMDEQIKEVRELFQKA 362
>gi|440790460|gb|ELR11743.1| helicase conserved Cterminal domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 249
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Query: 351 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 410
+IC KPL L+ LL+ ++ + FTSSVESTHRL LL G+ + EYS Q
Sbjct: 2 VICSLAYKPLVLLYLLEMFDFKRTLCFTSSVESTHRLYLLLTLMGQ--TGVAEYSSTLPQ 59
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
R++ ++ F +G I+++++SDAM+RG+D+E V NV+NYD P +IKTY+HR GRTARAG+
Sbjct: 60 RKRTQIIEKFAKGDIKIVIASDAMSRGLDIEDVENVINYDVPPFIKTYVHRVGRTARAGR 119
Query: 471 LGRCFTLLHKDEVKRFKKLLQKADNDS 497
G+ +TLL K E F+ +L+KA++ +
Sbjct: 120 QGKTYTLLLKSEAHHFRSMLKKAEHST 146
>gi|19552665|ref|NP_600667.1| helicase [Corynebacterium glutamicum ATCC 13032]
gi|62390333|ref|YP_225735.1| superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC
13032]
gi|145295583|ref|YP_001138404.1| hypothetical protein cgR_1510 [Corynebacterium glutamicum R]
gi|417970798|ref|ZP_12611729.1| hypothetical protein CgS9114_07220 [Corynebacterium glutamicum
S9114]
gi|21324218|dbj|BAB98843.1| Superfamily II DNA and RNA helicases [Corynebacterium glutamicum
ATCC 13032]
gi|41325670|emb|CAF21459.1| Superfamily II DNA or RNA helicase [Corynebacterium glutamicum ATCC
13032]
gi|140845503|dbj|BAF54502.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045094|gb|EGV40768.1| hypothetical protein CgS9114_07220 [Corynebacterium glutamicum
S9114]
gi|385143575|emb|CCH24614.1| putative helicase [Corynebacterium glutamicum K051]
Length = 448
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 190/454 (41%), Gaps = 111/454 (24%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
L++ GI+ FP+Q A + L +D+ PTGSGKT ++ LP++ L+
Sbjct: 17 LRSQGITEAFPIQEAAIPDA----LAGKDVLGRGPTGSGKTFTFGLPMITRLARSGASKP 72
Query: 103 ---RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LV++PTR+LA QV++
Sbjct: 73 GRPRGLVLVPTRELAA---------------------------------------QVRER 93
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
A +GL V VG +I I+ L + VDILVATP
Sbjct: 94 LDDPARVMGLRVLEVVGGVNINRNITALA---------------------TPVDILVATP 132
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR D IN + +L + +DE D++ + + ++ LT + +
Sbjct: 133 GRAQDLINQKK-LSLADVSVTALDEADQMADMGFLPQVKKLMDLTPKNGQ---------- 181
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+++ SATL D +KL LH+P+ +T +
Sbjct: 182 ----------------------------RLLFSATLDGDVSKLVDRYLHNPITHSTAPVQ 213
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
+ + +E Y+L+ + P V L + E K I+F + R L G +
Sbjct: 214 AAV-DTMEHYRLLVGGR-DPRNSVVLSIAAREGKTIMFMRTKHGVDRQVKKLRRVGVNAV 271
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
I G QS R+ L F +G I VLV++D RG+DV+ V+ VV+ D PA K Y+
Sbjct: 272 GIHGDKG---QSTRTNALAGFADGSIPVLVATDIAARGIDVDDVSLVVHVDPPAEHKAYL 328
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
HRAGRTARAG G TL+ +++K ++L QKA
Sbjct: 329 HRAGRTARAGTSGTVVTLVMDEQIKEVRELFQKA 362
>gi|84999282|ref|XP_954362.1| ATP-dependent RNA helicase [Theileria annulata]
gi|65305360|emb|CAI73685.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 503
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 214/501 (42%), Gaps = 104/501 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYAL 88
P L ++ I+ FPVQ I ++ D I +PTG GKTL YAL
Sbjct: 39 FQPHLMNVIREKKINQFFPVQEKSIPLLINNTYRDKYSVLSCDFIITAPTGQGKTLCYAL 98
Query: 89 PIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSL 148
P++ + N L +L+++P+R+L
Sbjct: 99 PLIYNILNLKENRLLSLIIVPSREL----------------------------------- 123
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
+ Q+ +VF+ + +++ D +K P L+A + Y ++
Sbjct: 124 ----VKQIYEVFSWFTDS----------KTTGHD-----LKGPSLKARVFYGDRSFVKCH 164
Query: 209 QSAVD----ILVATPGRLMDH-INATRGF--TLEHLCYLVVDETDRLLREAYQAWLPTVL 261
V+ I + TPG L+++ ++ R F T EHL ++V+DE D +L + + W+ V+
Sbjct: 165 DMLVNDPPHIAICTPGVLVEYSVDFQREFYDTFEHLKWIVIDEVDTMLNQTFYEWVDVVV 224
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
L S S + + GV + K+++SAT+ +
Sbjct: 225 DLV----------------SRLKSKEPNQSLGVPQ-----------KILVSATVPLKSHD 257
Query: 322 LAQLDLHHPLFLTTGETRYKLPERLESYKLICESK---LKPLYLVALLQSLGEEKCIVFT 378
+ L+L+ P+ L E+ YKLPE L+ ++C ++ L+ L L+A L +VF
Sbjct: 258 IELLELNRPILLRLKESIYKLPENLKQSYVVCSNRPVSLEFLKLMAFLYKDVTGNVLVFF 317
Query: 379 SSVESTHRLCTL-----LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
S V++ H++ L L H G K E +G Q R+ +K +++ L+ SD
Sbjct: 318 SKVQTCHKITRLMQIYNLKHGGGF--KAIELTGRMPQKQRNNAIKTYKDEDRVCLLCSDV 375
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
+RGMD+ N VV+YD P + +YIHRAGRTAR G + K+F + K
Sbjct: 376 ASRGMDLSNTNVVVSYDFPNKLSSYIHRAGRTARGNNKGTFCVFVSNQTEKKFHNFMNKL 435
Query: 494 DNDSCPIHSIPSSLIESLRPV 514
D + I ++ + + V
Sbjct: 436 KIDEEKLKKIELDIVLNQKKV 456
>gi|50547049|ref|XP_500994.1| YALI0B16896p [Yarrowia lipolytica]
gi|74660102|sp|Q6CEB8.1|DRS1_YARLI RecName: Full=ATP-dependent RNA helicase DRS1
gi|49646860|emb|CAG83247.1| YALI0B16896p [Yarrowia lipolytica CLIB122]
Length = 753
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 196/437 (44%), Gaps = 105/437 (24%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLR 103
GIS+L + + TI L +DL + TGSGKT +Y +P+++ L + V +
Sbjct: 266 GISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVAATK 325
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
+V+ PTR+L++QV AD + + Q+ S
Sbjct: 326 VVVLTPTRELSIQV----------------AD--VGKKLAQYVS---------------- 351
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
G+ GLAVG ++ + EL RP ++++ATPGR +
Sbjct: 352 ----GVRFGLAVGGLNLRVQEQELKTRP---------------------EVVIATPGRFI 386
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ + F ++ + LV+DE DR+L E +Q L +L T LP
Sbjct: 387 DHVRNSPSFNVDDVEILVIDEADRMLEEGFQQELTEIL---------------TLLPKKR 431
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 343
+L + SAT+ + L QL L P+ + +
Sbjct: 432 QTL-----------------------LFSATMNSSISSLIQLSLSRPVRVMINPPKQAAS 468
Query: 344 ERLESY-KLICESKLKPLYLVALLQSLG-EEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
++ + ++ LKP L ++L+ + E++ I+F + E+ HRL +L G ++I
Sbjct: 469 GLVQEFVRIRKRDHLKPALLASILKKMDKEQRTIIFVARKETAHRLRIMLGLLG---VRI 525
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
E G Q R +++ AF++ ++ +LV +D +RG+D+ + VVNYD P Y+HR
Sbjct: 526 GELHGALSQEQRLQSITAFKKLEVPILVCTDLASRGLDIPKIECVVNYDMPQTHAVYLHR 585
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ GR TL+
Sbjct: 586 VGRTARAGREGRSITLV 602
>gi|47211205|emb|CAF90162.1| unnamed protein product [Tetraodon nigroviridis]
Length = 517
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 191/429 (44%), Gaps = 106/429 (24%)
Query: 88 LPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 145
LP+++ L R + R LV++PTR+L +QV HS++ QF
Sbjct: 2 LPVLERLVYKPRTSQVTRVLVLVPTRELGIQV------------------HSVSRQLAQF 43
Query: 146 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 205
S+ + LAVG G+ ++V
Sbjct: 44 TSI---------------------TTCLAVG-------------------GLDLKSQEVA 63
Query: 206 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
L++ D+L+ATPGRL+DH++ T F L H+ L++DE DR+L E ++ + +++L
Sbjct: 64 --LRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDEYFEEQMKEIIRL-- 119
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
C R M+ SAT++++ LA +
Sbjct: 120 --------------------------CSYNRQ----------TMLFSATMSEEVKDLAAV 143
Query: 326 DLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVES 383
L P+ + P + + I +K + + ALL ++ + FT + +
Sbjct: 144 SLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAVVAALLTRTFQDHVMCFTQTRKQ 203
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
HRL LL G +K+ E G Q+ R + L+ F++ +I +LV++D RG+D++GV
Sbjct: 204 AHRLHILLGLMG---LKVGELHGELSQNQRLENLRRFKDEQIDILVATDVAARGLDIDGV 260
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSI 503
V+N+ P+ +K Y+HR GRTARAG+ GR +L+ + E K K++++ A S +
Sbjct: 261 KTVINFTMPSTMKHYVHRVGRTARAGRSGRSVSLVGESERKILKEVVKSAKT-SVKARVL 319
Query: 504 PSSLIESLR 512
P +I R
Sbjct: 320 PPEVILKFR 328
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 108/420 (25%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
+D+ + TGSGKT ++ALPI+Q L+ ALV+ PTR+LA Q++
Sbjct: 82 KDVFGLAQTGSGKTAAFALPILQKLAENPYGVF-ALVLTPTRELAFQIS----------- 129
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
D F A+ V L + VG + + L++
Sbjct: 130 ----------------------------DQFKALGSEVNLRSTVVVGGMDMTTQAKALMQ 161
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF--TLEHLCYLVVDETDR 247
RP I++ATPGRL DH G YLV+DE DR
Sbjct: 162 RPH---------------------IVIATPGRLRDHFMNDPGIPDVFAKAKYLVLDEADR 200
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
L+ +++ L +V + S+ +
Sbjct: 201 LMDVGFESELRSVFETMPSNRQT------------------------------------- 223
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
++ SAT+T + L L L F E +K E L+ ++ + +K +YL+ ++
Sbjct: 224 -LLFSATMTSNLKALHDLSLDKAFFYQQYEG-FKTVEALQQQYILTPANVKDVYLMHIMS 281
Query: 368 SLGEEK---CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 424
+L E K I+F SS + H L +++ EL + ++ Q R +L F+ G+
Sbjct: 282 TLEERKIRSVIIFASSCRTCHLLSLMMS---ELEVDTTALHSMKTQQQRLASLSRFKSGQ 338
Query: 425 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
+ +L+++D +RG+D+ V+ V+NYD P + + Y+HR GRTARAG+ G +L+ + +V+
Sbjct: 339 VSILIATDVASRGLDIPTVDLVINYDIPRFTRDYVHRVGRTARAGRGGSAVSLITQYDVQ 398
>gi|239612589|gb|EEQ89576.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ER-3]
Length = 845
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 157/333 (47%), Gaps = 87/333 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQ 92
L+ L LQ G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V
Sbjct: 267 LNKNLISILQKRGYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVA 325
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ + LR LVV+PTR+L Q A C+ C
Sbjct: 326 GIEQLPLARLRGLVVVPTRELVKQARDA-CELC--------------------------- 357
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAG 196
A GL +G AVG +S+ +E + LIK +L E+
Sbjct: 358 -----------ATRTGLRIGTAVGTASLKEEQALLIKHDQLYSPSNRRIGNGHQMIAESW 406
Query: 197 ICYDPEDVLQELQSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVV 242
++ ++ + E++ + +DIL+ TPGRL+DHI +T+GF+LEHL +LV+
Sbjct: 407 ASFNFQEYITEVERSHSAFPDHVATPSPNIDILICTPGRLVDHIRSTKGFSLEHLEWLVI 466
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL E++Q W+ V+ + + LP + C
Sbjct: 467 DEADRLLNESFQEWVEVVIPALERVRVDVAGKSGRILPDLGWQI-----C---------- 511
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
PRL K++LSAT+T+D KL L L +P + +
Sbjct: 512 KPRLRKIILSATMTRDIAKLNSLRLQNPKLVVS 544
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 374 CIVFTSSVESTHRLCTLL--------NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 425
+VFT S ES RL LL N G L + + S KT+ A+R GK+
Sbjct: 672 VLVFTKSSESASRLARLLVLMHPPFANRIGTL-------AKSSKSSTSRKTISAYRNGKL 724
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
+++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +TL+ E +
Sbjct: 725 SIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAWTLVAHREGRW 784
Query: 486 FKKLLQKADNDSCP 499
F + K CP
Sbjct: 785 FANEIVK-----CP 793
>gi|83766036|dbj|BAE56179.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 191/430 (44%), Gaps = 117/430 (27%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 115
+ ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+
Sbjct: 364 IQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAV 423
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q C N+ A + + F L V
Sbjct: 424 Q---------CYNV---------ATKLATYTDITFCQL---------------------V 444
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 445 GGFSLREQENILKKRP---------------------DVIIATPGRFIDHMRNSASFTVD 483
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L LV+DE DR+L + + L +L T +P + +
Sbjct: 484 TLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT---------- 518
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE- 354
M+ SAT+T +KL ++ L+ P+ L + S LI E
Sbjct: 519 -------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNT------SMNLIQEF 559
Query: 355 SKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+L+P YL+ L + + + IVF + HR+ FG L +K E G
Sbjct: 560 VRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIA---FGLLGLKAAELHGS 616
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
Q R ++++ FREGK+ L+++D RG+D++GV V+NY+ P + Y+HR GRTAR
Sbjct: 617 MSQEQRIRSVENFREGKVSFLLATDLAARGLDIKGVETVINYEAPQSHEIYLHRVGRTAR 676
Query: 468 AGQLGRCFTL 477
AG+ GR T+
Sbjct: 677 AGRSGRACTI 686
>gi|327356903|gb|EGE85760.1| DEAD/DEAH box helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 848
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 157/333 (47%), Gaps = 87/333 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER--DLCINSPTGSGKTLSYALPIVQ 92
L+ L LQ G ++ FP+Q AV E +G G + DLCI++ TGSGKTL+YALP+V
Sbjct: 267 LNKNLISILQKRGYTTAFPIQAAVL-ELLGNGEHQHSGDLCISAATGSGKTLAYALPLVA 325
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ + LR LVV+PTR+L Q A C+ C
Sbjct: 326 GIEQLPLARLRGLVVVPTRELVKQARDA-CELC--------------------------- 357
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL----------------EAG 196
A GL +G AVG +S+ +E + LIK +L E+
Sbjct: 358 -----------ATRTGLRIGTAVGTASLKEEQALLIKHDQLYSPSNRRIGNGHQMIAESW 406
Query: 197 ICYDPEDVLQELQSA--------------VDILVATPGRLMDHINATRGFTLEHLCYLVV 242
++ ++ + E++ + +DIL+ TPGRL+DHI +T+GF+LEHL +LV+
Sbjct: 407 ASFNFQEYITEVERSHSAFPDHVTTPSPNIDILICTPGRLVDHIRSTKGFSLEHLEWLVI 466
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL E++Q W+ V+ + + LP + C
Sbjct: 467 DEADRLLNESFQEWVEVVIPALERVRVDVAGKSGRILPDLGWQI-----C---------- 511
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
PRL K++LSAT+T+D KL L L +P + +
Sbjct: 512 KPRLRKIILSATMTRDIAKLNSLRLQNPKLVVS 544
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 374 CIVFTSSVESTHRLCTLL--------NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 425
+VFT S ES RL LL N G L + + S KT+ A+R GK+
Sbjct: 675 VLVFTKSSESASRLARLLVLMHPPFANRIGTL-------AKSSKSSTSRKTISAYRNGKL 727
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
+++++D +RG+D+ + +VV+YD P + +YIHR GRTARAG+ G +TL+ E +
Sbjct: 728 SIVIATDRASRGLDLPSLTHVVSYDIPTSLTSYIHRVGRTARAGRSGSAWTLVAHREGRW 787
Query: 486 FKKLLQKADNDSCP 499
F + K CP
Sbjct: 788 FANEIVK-----CP 796
>gi|242778101|ref|XP_002479171.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722790|gb|EED22208.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 833
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 194/445 (43%), Gaps = 119/445 (26%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G + P+Q ++ I L +D+ + TGSGKT ++ +PI++ L R V
Sbjct: 325 GLAAVGFTKPTPIQ----RKAIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 380
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +++PTR+LA+Q C N+ A + + F L
Sbjct: 381 PTSRVAILMPTRELAVQ---------CYNV---------ATKLATYTDITFCQL------ 416
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+G S+ ++ + L KRP DI++ATP
Sbjct: 417 ---------------IGGFSLREQENVLKKRP---------------------DIIIATP 440
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 441 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 485
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ L+ P+ L +
Sbjct: 486 PKSRQT-----------------------MLFSATMTDSVDKLIRVGLNRPVRLMVDAKK 522
Query: 340 YKLPERLESYKLICESKLKP-------LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
++ + +L+P L+ L Q + + I+F + HR+ +
Sbjct: 523 QTAGTLVQEF-----VRLRPGREDKRLASLIHLCQQVYAARVIIFFRQKKEAHRVRVIFG 577
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
FG +K E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P
Sbjct: 578 LFG---LKAAELHGSMSQEQRIKSVEDFRDGKVAFLLATDVASRGLDIKGVETVINYEAP 634
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTL 477
+ Y+HR GRTARAG+ GR TL
Sbjct: 635 QTHEIYLHRVGRTARAGRSGRACTL 659
>gi|238484285|ref|XP_002373381.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|317140428|ref|XP_001818181.2| ATP-dependent RNA helicase drs1 [Aspergillus oryzae RIB40]
gi|91206589|sp|Q2UQI6.2|DRS1_ASPOR RecName: Full=ATP-dependent RNA helicase drs1
gi|220701431|gb|EED57769.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|391871961|gb|EIT81110.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 820
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 191/430 (44%), Gaps = 117/430 (27%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 115
+ ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+
Sbjct: 328 IQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAV 387
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q C N+ A + + F L V
Sbjct: 388 Q---------CYNV---------ATKLATYTDITFCQL---------------------V 408
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 409 GGFSLREQENILKKRP---------------------DVIIATPGRFIDHMRNSASFTVD 447
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L LV+DE DR+L + + L +L T +P + +
Sbjct: 448 TLEILVLDEADRMLEDGFADELNEIL---------------TTIPKSRQT---------- 482
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE- 354
M+ SAT+T +KL ++ L+ P+ L + S LI E
Sbjct: 483 -------------MLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNT------SMNLIQEF 523
Query: 355 SKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+L+P YL+ L + + + IVF + HR+ FG L +K E G
Sbjct: 524 VRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIA---FGLLGLKAAELHGS 580
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
Q R ++++ FREGK+ L+++D RG+D++GV V+NY+ P + Y+HR GRTAR
Sbjct: 581 MSQEQRIRSVENFREGKVSFLLATDLAARGLDIKGVETVINYEAPQSHEIYLHRVGRTAR 640
Query: 468 AGQLGRCFTL 477
AG+ GR T+
Sbjct: 641 AGRSGRACTI 650
>gi|452821215|gb|EME28248.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 404
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 191/422 (45%), Gaps = 103/422 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RD+ + TGSGKT ++ +PI+Q+L + + ALV+ PTR+LA Q
Sbjct: 44 RDIIGIAETGSGKTAAFVIPILQSLLDHN-KPYFALVISPTRELAFQ------------- 89
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
+K+ F + ++ L V + VG I + + +
Sbjct: 90 --------------------------IKEHFELLGRSIALRVVVIVGGVDIVSQAAAFAR 123
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
+P ++VATPGRL+DH+ T+GF+L+ + +LV+DE DRLL
Sbjct: 124 KPH---------------------VIVATPGRLVDHLENTKGFSLQSIRFLVLDEADRLL 162
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
++ L ++ LP S
Sbjct: 163 SMDFEKELEKII---------------AALPKERQSF----------------------- 184
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
+ SAT+T+ KL ++ L +P+ L E +Y E L L +K K +LV L Q
Sbjct: 185 LFSATMTRKVQKLQRVSLTNPVKLQVSE-KYATVETLIQNYLFIPAKYKDCFLVFLCQEW 243
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
I+F + ST RL LL + G I G Q+ R + L F++GK VL+
Sbjct: 244 SGHPTIIFVDTQNSTLRLSLLLKNLGFGATAIH---GGMLQTKRLEALSKFKQGKKTVLI 300
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
++D +RG+D+ V+ +VNYD P ++K YIHR GRT+RAG+ GR L+ + +++ ++K+
Sbjct: 301 ATDLASRGLDIPSVDLIVNYDIPLHVKAYIHRVGRTSRAGRTGRAINLVTQYDIEAYQKV 360
Query: 490 LQ 491
Q
Sbjct: 361 EQ 362
>gi|300781219|ref|ZP_07091073.1| ATP-dependent RNA helicase RhlE [Corynebacterium genitalium ATCC
33030]
gi|300532926|gb|EFK53987.1| ATP-dependent RNA helicase RhlE [Corynebacterium genitalium ATCC
33030]
Length = 408
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 199/467 (42%), Gaps = 112/467 (23%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
L GI FP+Q A P + + RD+ PTGSGKT ++ LP++ L+ +
Sbjct: 17 LTKQGIEEPFPIQEAAI-----PAVLDGRDVLGRGPTGSGKTFAFGLPMLALLAGSPSKP 71
Query: 102 --LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LV+ PTR+LA Q+ Q D
Sbjct: 72 GHPRGLVLAPTRELAAQIR------------------------------------QRLDD 95
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
AA A GL V VG +I + I + L + VD+LVATP
Sbjct: 96 PAA---AAGLRVLEVVGGVNINNHI---------------------RSLAAPVDLLVATP 131
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR D IN + + + + +DE D++ A +LP V +L + EN
Sbjct: 132 GRAQDLINQGK-LSFDSVAVTAIDEADQM---ADMGFLPQVRKLVDATPENGQ------- 180
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
+++ SATL D KL Q L P+ +T +
Sbjct: 181 ----------------------------RLLFSATLDGDVEKLVQRYLTDPVTHSTAPAQ 212
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
+ + ++ Y+L+ S+ +V L+ + E K I+F + R L G I
Sbjct: 213 AAV-DTMQHYQLLVGSRESRNEIVPLIAAR-EGKTIMFMRTKHGVDRQVKKLRRVG---I 267
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
+ + G + Q R++ ++ F +G + VLV++D RG+D+ V+ VV+ D PA K+Y+
Sbjct: 268 EAQPLHGDKGQGARTRAIEGFTDGSVPVLVATDIAARGIDISDVSLVVHIDPPAEHKSYL 327
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSS 506
HRAGRTARAG G TL+ ++ K +LL+KA D+ + P S
Sbjct: 328 HRAGRTARAGTSGTVVTLVMDEQRKEVDQLLRKAGVDAQKVRVTPMS 374
>gi|145493178|ref|XP_001432585.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399698|emb|CAK65188.1| unnamed protein product [Paramecium tetraurelia]
Length = 564
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 189/428 (44%), Gaps = 106/428 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSN-RAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
+D+ +S TGSGKT ++ LPI+Q N + ++ +AL++LPTR+LALQ
Sbjct: 154 KDVLASSCTGSGKTAAFLLPIMQRFGNLKNLQYSKALIILPTRELALQ------------ 201
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
C ++F + + L +G I + +EL
Sbjct: 202 -------------CF--------------EMFEKLNKYANCTAALVIGAVPIQQQETELR 234
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
K P DI++ATPGR +D + + ++++ LV DE DRL
Sbjct: 235 KYP---------------------DIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRL 273
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
+ ++ + +LQ T D +
Sbjct: 274 MEMGFEKEIRQILQATSKDRQT-------------------------------------- 295
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTT---GETRYKLPERLESYKLICESKLKPLYLVAL 365
+++SATL +L+ L L++P+ + G Y L + L + +S + L+ L
Sbjct: 296 VLISATLNATVKQLSLLALNNPIKVNVDFVGGLAYGLKQYLLRIRSNQDSD-REATLITL 354
Query: 366 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 425
L++ +EK I+F + HRL +L G L + E G Q R + + F+EGK
Sbjct: 355 LKTKFKEKTIIFVKTKHDCHRLAIVL---GFLDMSSCELHGNLSQQQRIQAYEDFKEGKF 411
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
Q L+++D RG+D+ V V+NY+ P + YIHR GRTAR G G T+ ++EV +
Sbjct: 412 QFLLATDLAARGLDLTDVKAVINYEIPYEVTRYIHRVGRTARIGAQGISVTICLENEVVK 471
Query: 486 FKKLLQKA 493
FKK+++++
Sbjct: 472 FKKMIRQS 479
>gi|169598332|ref|XP_001792589.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
gi|118595361|sp|Q0V1Z7.1|DRS1_PHANO RecName: Full=ATP-dependent RNA helicase DRS1
gi|111069059|gb|EAT90179.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
Length = 808
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 206/476 (43%), Gaps = 109/476 (22%)
Query: 31 HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPI 90
H L ++ L +G + P+Q + I + +D+ + TGSGKT ++ +PI
Sbjct: 288 HAMSLSRPIQKGLAAIGFTEPTPIQA----KAIPIAMQGKDVVGGAETGSGKTAAFLIPI 343
Query: 91 VQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSL 148
++ L R V R + +PTR+LA+Q C N+ A F +
Sbjct: 344 LERLLYRPKKVPTTRVAIFMPTRELAVQ---------CFNV---------ATKLASFTDI 385
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
F L A G SS E+ L RP
Sbjct: 386 TFALL--------------------AGGFSSREQEVM-LKTRP----------------- 407
Query: 209 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 268
D+++ATPGR +DH++ T F +EHL LV+DE DR+L E ++ L +L
Sbjct: 408 ----DVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFETQLNEIL------- 456
Query: 269 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 328
T +P + + M+ SAT+T +KL ++ +
Sbjct: 457 --------TTIPKSRQT-----------------------MLFSATMTSTVDKLIRIGMD 485
Query: 329 HPLFLTTGETRYKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHR 386
P+ L ++ + + + + + K YL+ + + + E+ I+F + HR
Sbjct: 486 KPVRLMVDAKKHTVKGLTQEFIRLRQGKEDKRLAYLMYICEKIYTERVIIFFRQKKEAHR 545
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
+ + G +K E G Q R + ++AFR GK L+++D +RG+D++ V+ V
Sbjct: 546 VRVVFALCG---LKASELHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVSTV 602
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS 502
+NY+ P + Y+HR GRTARAG+ GR TL + + K K+ ++++ + + S
Sbjct: 603 INYEAPQSHEIYLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVKQSRDQGSKVVS 658
>gi|296803502|ref|XP_002842604.1| ATP-dependent RNA helicase dbp6 [Arthroderma otae CBS 113480]
gi|238838923|gb|EEQ28585.1| ATP-dependent RNA helicase dbp6 [Arthroderma otae CBS 113480]
Length = 836
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 183/383 (47%), Gaps = 62/383 (16%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW-----QETIGPGL 67
PW+ +P S L D L AL+ G + PVQ AV T PG
Sbjct: 238 PWLAAPSTASAGHPSSFSDLGIGD-SLVDALKAKGFTEALPVQSAVIPLLSKSSTRYPG- 295
Query: 68 FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCK 127
D+C+++ TGSGKTL+Y LP+ L V LRA++++PTR+L QV A C+ C
Sbjct: 296 ---DVCVSAATGSGKTLAYVLPLFSGLERLPVARLRAVIIVPTRELVKQVRDA-CELCSG 351
Query: 128 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS--------S 179
GL ++ ++ + Q+ + A P S G + S
Sbjct: 352 G-SGLRIGTAVGSSALKDEQT------QIMEQNRAYKPDSWTSGGNGSNKMTAEEWASFS 404
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
+ D ++E+ + K P+ V+ E VDIL+ TPGRL+DHI +T+GFTLE L +
Sbjct: 405 LTDYVAEVEEYSKTL------PDHVI-ESSPCVDILICTPGRLVDHIRSTKGFTLESLEW 457
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LV+DE DRLL E++Q W+ VL + ST + K I C VE
Sbjct: 458 LVIDEADRLLNESFQEWVDIVLPALDG------VEKSTCSGPLYQLTKGI-SCPVE---- 506
Query: 300 DKPYPRL-VKMVLSATLTQDPNKLAQLDLHHPLFLT-----------TGE-TRYKLPERL 346
PR K+VLSAT+T+D KL L L +P +T TG+ + + LP L
Sbjct: 507 ----PRWPQKVVLSATMTRDITKLNSLRLQNPKLVTVDAAEKGNAGLTGQDSNFALPSLL 562
Query: 347 -ESYKLICESKLKPLYLVALLQS 368
ES L+ + KPLYL+ L++S
Sbjct: 563 DESSILVGDGSEKPLYLLKLVRS 585
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 367 QSLGEEKCIVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKTLKAFREGKI 425
QS + ++FT S E+ RL LL L KI + S + + A++ GKI
Sbjct: 656 QSTFQPSVLIFTKSSEAASRLSRLLTLIHPYLDGKIGTLIKSNKSSTSRRAISAYKRGKI 715
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKR 485
++++++D +RG+D+ ++NV+NYD P + TY+HR GRTARAG+ G +TL+ E +
Sbjct: 716 RIIIATDRASRGLDLPLLDNVINYDVPNSLTTYVHRVGRTARAGRPGTAWTLVTHSEGRW 775
Query: 486 FKKLLQKADNDSCPIHSI 503
FK + + + + P +I
Sbjct: 776 FKNEISRGNVNRAPGKTI 793
>gi|393910125|gb|EJD75750.1| DEAD box polypeptide 27 [Loa loa]
Length = 684
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 204/455 (44%), Gaps = 110/455 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPTRDLALQVNSARCKYCCK 127
RDLC S TG+GKT ++ LP+++ L R + R +V+ PTR+LA
Sbjct: 179 RDLCACSATGTGKTAAFMLPVLERLLYRPQQKAMTRVVVLTPTRELA------------- 225
Query: 128 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 187
I ++ QF + + + L G + + + L
Sbjct: 226 -----IQTFQVSRQLSQF---------------------MRIDICLCAGGLDLKTQEAAL 259
Query: 188 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
+RP DI++ATPGRL+DH++ F+L ++ LV+DE DR
Sbjct: 260 RQRP---------------------DIVIATPGRLIDHLHNAPNFSLVNVEILVLDEADR 298
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
+L EA+ + ++ L C R
Sbjct: 299 MLDEAFADQMKEIIHL----------------------------CAQNRQ---------- 320
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALL 366
M+ SAT+T +LA + L +P+ L TG T L R E ++ + +VA L
Sbjct: 321 TMLFSATMTDQVEELAAVSLKNPVKLFITGNTETALNLRQEFVRIRESHETDRECIVAGL 380
Query: 367 QSLG-EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE-YSGL-QRQSVRSKTLKAFREG 423
+ + I+F + + RL +L G +K+ + +SGL QRQ V + L F++
Sbjct: 381 VTRNFPDHTIIFVKTKRTCRRLHIVLGLLG---VKVGQLHSGLTQRQRVEA--LFRFKKA 435
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
++ VLVS+D RG+DVEGV V+N D P+ +K Y+HR GRTARAG++GR +L+ + E
Sbjct: 436 ELDVLVSTDLAARGLDVEGVKTVINMDMPSTLKQYVHRVGRTARAGRVGRSISLVGESER 495
Query: 484 KRFKKLLQKADNDSCPIHS-IPSSLIESLRPVYKS 517
K K+++ C I ++++E+ + +S
Sbjct: 496 KILKEIIASNKGGGCLKQRLISANVVEAYKNRIES 530
>gi|354616053|ref|ZP_09033745.1| DEAD/DEAH box helicase domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
gi|353219600|gb|EHB84147.1| DEAD/DEAH box helicase domain protein, partial [Saccharomonospora
paurometabolica YIM 90007]
Length = 471
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 185/447 (41%), Gaps = 107/447 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
ALQ+ GI F +Q T+ L D+ + TG GKTL + +P++Q LS
Sbjct: 26 ALQDTGIERTFAIQSL----TLPLALAGDDVIGQARTGMGKTLGFGVPLLQRLSLPGDGT 81
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
+ALVV+PTR E+CVQ KD+
Sbjct: 82 PQALVVVPTR----------------------------ELCVQV----------AKDLTE 103
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A G +G ++ + G Y+ + ++ LQ VD+++ TPGR
Sbjct: 104 A-----GAHLG---------------VRTASIYGGRPYEAQ--IETLQQGVDVVIGTPGR 141
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+D R L + LV+DE D +L + LP + ++ R E R +
Sbjct: 142 LLDLAEQQR-LVLGKVGTLVLDEADEMLDLGF---LPDIERILRMVPEKRQT-------- 189
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-RY 340
M+ SAT+ LA+ LH P + E
Sbjct: 190 ---------------------------MLFSATMPGPIINLARTFLHQPTHIRAEENDEG 222
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
+ ER + S KP + +LQ+ G ++FT + + ++ + E
Sbjct: 223 AIHERTRQFVYRSHSLDKPELVAKVLQAEGRGLTMIFTRTKRTAQKVA---DDLAERGFA 279
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
G Q R + L+AFR GKI VLV++D RG+DVE V +VVNY P KTY+H
Sbjct: 280 AAAVHGDLGQGAREQALRAFRSGKIDVLVATDVAARGIDVEDVTHVVNYQTPDDQKTYVH 339
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFK 487
R GRT RAG+ G TL+ DE+ R+K
Sbjct: 340 RIGRTGRAGKTGVALTLVDWDEIPRWK 366
>gi|334703122|ref|ZP_08518988.1| putative ATP-dependent RNA helicase RhlE [Aeromonas caviae Ae398]
Length = 417
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 194/460 (42%), Gaps = 111/460 (24%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L PRL+ L ++G ++ PVQ + I L RDL + TG+GKT ++ LP+++
Sbjct: 10 ALSPRLQQTLTDLGYAAPTPVQASA----IPLILAGRDLMAGAQTGTGKTAAFVLPLLEQ 65
Query: 94 L----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
L ++ A R +RALV++PTR+LA+QV + +Y
Sbjct: 66 LLQHPTSDAPRPIRALVLVPTRELAVQVAESVTRY------------------------- 100
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
A L+ L G SIA ++ + L
Sbjct: 101 --------------ARGTTLTSTLVYGGVSIAAQV---------------------EALN 125
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
+ VDIL+ATPGRL+DH+ G TL L +LV DE DR+L + + +L+ +D +
Sbjct: 126 AGVDILIATPGRLLDHLRQG-GLTLAELRHLVFDEADRMLDMGFMDEIKALLKQIPADRQ 184
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
T L SA C V +D P LV++ P ++
Sbjct: 185 -------TLLFSATCDDNLFALCKVL--LRD---PALVEVA--------PRNTTAAEVEQ 224
Query: 330 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
++ GE + L E + + K G ++F+ + + +L
Sbjct: 225 RVYAVDGERKLALVEHMLTVK-------------------GWAPALIFSRTRQGADKLAQ 265
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
L G I + G QS R L AFR G +Q LV++D RG+D+ +N+V+N
Sbjct: 266 QLGKGG---INALAFHGDLSQSARENVLLAFRAGTLQALVATDVAARGLDITDLNHVINL 322
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+ P + Y+HR GRT RAG G TL ++ +K+
Sbjct: 323 EFPHQPEDYVHRIGRTGRAGNKGLAITLFSPEDAPLLEKV 362
>gi|328772256|gb|EGF82294.1| hypothetical protein BATDEDRAFT_34342 [Batrachochytrium
dendrobatidis JAM81]
Length = 741
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 197/445 (44%), Gaps = 108/445 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVR--CLRALVVLPTRDLALQVNSARCKYCCK 127
RD+C ++ TGSGKT ++ +PIV+ L R R L+++PTR+L +Q C+
Sbjct: 225 RDICGSAVTGSGKTAAFIIPIVERLLFRPKNDATTRVLILVPTRELGVQ---------CQ 275
Query: 128 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 187
++ IS+ + D+ S L VG + +EL
Sbjct: 276 SVA--------------------ISISKFTDI----------STCLCVGGLPTKTQEAEL 305
Query: 188 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
RP DI++ATPGRL+DHI+ + F L+ + LV+DE DR
Sbjct: 306 RLRP---------------------DIIIATPGRLIDHIHNSPSFFLDAIDILVIDEADR 344
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
+L + + A L +++ T P R
Sbjct: 345 ILDDGFDAELNEIIKHT-------------------------------------PRTRQT 367
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL-ESYKLICESK--LKPLYLVA 364
M+ SAT+T + + L +L L+ P+ L + KL RL + + + K +P L A
Sbjct: 368 -MLFSATMTDNVDDLIKLSLNRPVRLFVDQN-TKLTNRLVQEFIRVRGHKETSRPAILAA 425
Query: 365 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 424
L + IVF S + H + + FG L +K E G Q R + L+ FRE K
Sbjct: 426 LCSRTYTSETIVFFRSKAAAHHMKII---FGFLGLKAAELHGNLTQLQRLEALELFREKK 482
Query: 425 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
+ L+++D +RG+D+ GV V+NYD P Y+HR GRTAR GR +L+ + + +
Sbjct: 483 VGFLLATDLASRGLDISGVKTVINYDMPKSYSIYVHRVGRTARGDLAGRAVSLVGEAD-R 541
Query: 485 RFKKLLQKADNDSCPIHSIPSSLIE 509
K+ K D+ +P++++E
Sbjct: 542 ALLKMAIKNTRDAVKNRIVPANVVE 566
>gi|224369411|ref|YP_002603575.1| protein RhlE2 [Desulfobacterium autotrophicum HRM2]
gi|223692128|gb|ACN15411.1| RhlE2 [Desulfobacterium autotrophicum HRM2]
Length = 460
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 202/477 (42%), Gaps = 111/477 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAV- 99
A++ G P+Q+ V P + +D+ + TG+GKT ++ALPIV+ L+
Sbjct: 15 AVKTKGYIEPTPIQIRVI-----PAILNGQDILARAQTGTGKTDAFALPIVEILARGKAH 69
Query: 100 -RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
R RALV+ PTR+LAL QV +
Sbjct: 70 RRHPRALVLTPTRELAL---------------------------------------QVGE 90
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
A A V L + G G+ +P+ + L+ VDILVAT
Sbjct: 91 SIKAYARRVSLRCTVVYG-------------------GVNVNPQ--IDRLKRGVDILVAT 129
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL+D R L + +LV DE DR+L + + +L+L D
Sbjct: 130 PGRLLDLAAFNRDVKLSKIEFLVFDEADRMLDLGFSDEISQILELVPQD----------- 178
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
RR M+ SAT T+ LA L P +
Sbjct: 179 -----------RRT----------------MLFSATYTRQIRDLADKMLKTPEQIEVTPN 211
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
++ L+ +S + L L+ L+ + +VFT + ++L L +++
Sbjct: 212 TTVAESIVQKVHLVEKSNKREL-LIHLITRSDWRQVLVFTRTKHGANKLAERL---AQVK 267
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
I G + QS R++TL+ F+ G+I++LV++D RG+D+ G+ +VVNYD P+ + Y
Sbjct: 268 ISAAALHGNKSQSFRTRTLQEFKNGEIRILVATDVAARGLDITGLPHVVNYDMPSVAEDY 327
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
+HR GRT RAG G +L+ K+E K F K ++ P+ ++ ++S P +
Sbjct: 328 VHRIGRTGRAGIQGVAVSLVSKEE-KVFLKSVESLLEQKIPVETVKGYTVDSAVPSF 383
>gi|404216140|ref|YP_006670335.1| DNA and RNA helicase, Superfamily II [Gordonia sp. KTR9]
gi|403646939|gb|AFR50179.1| DNA and RNA helicase, Superfamily II [Gordonia sp. KTR9]
Length = 527
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 213/500 (42%), Gaps = 112/500 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D R+ AL G + F +Q + T+ L DL + TG GKT + +P+V L
Sbjct: 25 VDERIVSALAADGKTHSFAIQ----ELTLPLALEGHDLIGQARTGMGKTFGFGIPLVHRL 80
Query: 95 SNRA---VRCL----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
++ A VR L RAL+++PTR E+CVQ
Sbjct: 81 AHAAASGVRPLDNTPRALIIVPTR----------------------------ELCVQVTG 112
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
L + IAPA+ ++ +AD + +K + G Y+ + + E
Sbjct: 113 DLQV-----------IAPALDVT---------LADGTTRPLKITSIYGGRPYEAQ--IAE 150
Query: 208 LQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
LQS VD++V TPGRL+D A +G L + LV+DE D +L
Sbjct: 151 LQSGVDVVVGTPGRLLDL--AQQGHLVLGKVSILVLDEADEMLDLG-------------- 194
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
FLP +ER P PR M+ SAT+ LA+
Sbjct: 195 -----------FLPD------------IERIMSALPTPRQT-MLFSATMPGPIVTLARTF 230
Query: 327 LHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
L+ P + + +R + Y + K + +LQ+ G +VFT + +
Sbjct: 231 LNRPTHIRAENANDSAVHDRTKQYAYRAHALDKAELVARILQADGRGATMVFTRTKRTAQ 290
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ + E K+ G Q R K L FR+G I VLV++D RG+D++ V +
Sbjct: 291 KVA---DDLAERGFKVGAVHGDLGQVAREKALNRFRDGTIDVLVATDVAARGIDIDDVTH 347
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 505
V+NY P KTY+HR GRT RAG+ G TL+ DE+ R+ +L+ KA N P
Sbjct: 348 VINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRW-ELIDKALNLGIPDPPETY 406
Query: 506 SLIESLR-----PVYKSGDV 520
S E LR P K+G +
Sbjct: 407 STSEHLRADLSIPESKTGRI 426
>gi|162606504|ref|XP_001713282.1| DEAD box protein [Guillardia theta]
gi|12580748|emb|CAC27066.1| DEAD box protein [Guillardia theta]
Length = 386
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 188/438 (42%), Gaps = 103/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F V TI L +DL + S TGSGKTL+Y LP++Q L + L ++++P+R
Sbjct: 22 FKKATKVQVYTIPHFLIGKDLLVYSQTGSGKTLAYILPLLQKLLYKKNNYL-PIIIVPSR 80
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+L Q+ F I+ + +
Sbjct: 81 ELVF---------------------------------------QISTTFETISCVFNIRI 101
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
L GI DP L + S DI+++TPGRL++ + T+
Sbjct: 102 A-------------------SLTGGI--DPNVQLVMISSNPDIIISTPGRLVEILKLTKN 140
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
++ LV+DE D+L+ ++ + + N+N+
Sbjct: 141 LEIKFCTDLVLDEADKLIHSDFKREINII---NSKTNKNK-------------------- 177
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
+L M+ SAT++ K+ + +P+ + + + P +++Y +
Sbjct: 178 -------------KL--MLFSATMSLGLEKIKFFKISNPVRIIINQNFFISPNLIQNY-I 221
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
C + K +YL+ L+ EEK I F + + T ++ LL F G Q+
Sbjct: 222 FCPFRYKEIYLLYLINEFYEEKLICFVETQKMTEKISILLKKFS---FDCYIIHGSLSQN 278
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R TL F GK ++LV++D +RG+D+ V+ ++NYD P Y+K YIHR GRT RAG+
Sbjct: 279 ERIDTLSKFTNGKKKILVATDLASRGLDICAVSLIINYDFPIYLKDYIHRTGRTGRAGRA 338
Query: 472 GRCFTLLHKDEVKRFKKL 489
GR +L+ + +++ F+K+
Sbjct: 339 GRAISLITQYDLRTFQKI 356
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 201/440 (45%), Gaps = 109/440 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L +G + P+Q ++ I L +D+ ++ TGSGKT ++ +PI++ L R V
Sbjct: 318 GLAAVGFTDPTPIQ----RKAIPVALLGKDIVGSAVTGSGKTAAFIVPILERLLFRPRKV 373
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R ++++PTR+LA+Q C N+ +A F + F L
Sbjct: 374 PTSRVVILMPTRELAVQ---------CYNVSVKLA---------TFTDVTFCQL------ 409
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
VG S+ ++ + L KRP D+++ATP
Sbjct: 410 ---------------VGGFSLREQENVLKKRP---------------------DVIIATP 433
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH+ + FT++ L LV+DE DR+L + + L +L T +
Sbjct: 434 GRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEIL---------------TTI 478
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ ++ P+ L +
Sbjct: 479 PKSRQT-----------------------MLFSATMTDSIDKLIRVGMNRPVRLMVDSKK 515
Query: 340 YKLPERLESY-KLICESKLKPL-YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ ++ + +L + K L YL+ L + + ++ I+F + HR+ + + G
Sbjct: 516 NTVSTLVQEFVRLRPGREDKRLGYLLHLCKEIYSKRVIIFFRQKKEAHRVRIIFSLLG-- 573
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P +
Sbjct: 574 -LKAAELHGSLSQEQRIKSVENFRDGKVAFLLATDVASRGLDIKGVETVINYEAPQSHEI 632
Query: 458 YIHRAGRTARAGQLGRCFTL 477
Y+HR GRTARAG+ GR T+
Sbjct: 633 YLHRVGRTARAGRSGRACTI 652
>gi|441514562|ref|ZP_20996379.1| putative ATP-dependent RNA helicase [Gordonia amicalis NBRC 100051]
gi|441450631|dbj|GAC54340.1| putative ATP-dependent RNA helicase [Gordonia amicalis NBRC 100051]
Length = 536
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 206/487 (42%), Gaps = 107/487 (21%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D R+ AL + G + F +Q + T+ L DL + TG GKT + +P++ L
Sbjct: 25 VDERIVSALADDGKTHTFAIQ----ELTLPLALEGHDLIGQARTGMGKTFGFGIPLLHRL 80
Query: 95 SN---RAVRCL----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
++ VR L RAL+++PTR E+CVQ
Sbjct: 81 AHAEASGVRPLDNTPRALIIVPTR----------------------------ELCVQVTG 112
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
L ++ P + + ++AD +K + G Y+ + + E
Sbjct: 113 DLQVAAPSL--------------------EVTLADGTRRPLKVTSIYGGRPYEAQ--IAE 150
Query: 208 LQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
LQS VD++V TPGRL+D A +G L + LV+DE D +L
Sbjct: 151 LQSGVDVVVGTPGRLLDL--AQQGHLVLGKVSILVLDEADEMLDLG-------------- 194
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
FLP +ER P PR M+ SAT+ LA+
Sbjct: 195 -----------FLPD------------IERIMSALPTPRQT-MLFSATMPGPIVTLARTF 230
Query: 327 LHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
LH P + + +R + Y + K + +LQ+ G +VFT + +
Sbjct: 231 LHRPTHIRAENANDSAVHDRTKQYAYRAHALDKAELVARILQADGRGATMVFTRTKRTAQ 290
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ + E K+ G Q R K LK FR+G I VLV++D RG+D++ V +
Sbjct: 291 KVA---DDLAERGFKVGAVHGDLGQIAREKALKRFRDGAIDVLVATDVAARGIDIDDVTH 347
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 505
V+NY P KTY+HR GRT RAG+ G TL+ DE+ R+ +L+ KA P +
Sbjct: 348 VINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRW-ELIDKALGLGIPDPAETY 406
Query: 506 SLIESLR 512
S E LR
Sbjct: 407 STSEHLR 413
>gi|453382028|dbj|GAC83496.1| putative ATP-dependent RNA helicase [Gordonia paraffinivorans NBRC
108238]
Length = 565
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 201/468 (42%), Gaps = 107/468 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D R+ AL + G + F +Q + T+ L DL + TG GKT + +P++ L
Sbjct: 38 VDERIVSALADDGKTQTFAIQ----ELTLPLALQGDDLIGQARTGMGKTYGFGIPLLHRL 93
Query: 95 SN---RAVRCL----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
+N +R L RALV++PTR E+C+Q S
Sbjct: 94 ANAEASGIRPLDNTPRALVIVPTR----------------------------ELCIQVTS 125
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
L I+ + DV ++AD + ++K + G Y E + E
Sbjct: 126 DLEIAARKT-DV-------------------TLADGTNRMLKITSIYGGRPY--ESQIAE 163
Query: 208 LQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
LQS VD++V TPGRL+D A +G L + LV+DE D +L
Sbjct: 164 LQSGVDVVVGTPGRLLDL--AQQGHLVLGKVAILVLDEADEMLDLG-------------- 207
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
FLP +ER P PR M+ SAT+ LA+
Sbjct: 208 -----------FLPD------------IERIMAALPTPRQT-MLFSATMPGPIVTLARTF 243
Query: 327 LHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
LH P + + +R + + K + +LQ+ G ++FT + +
Sbjct: 244 LHRPTHIRAENANDSAVHDRTTQFAYRAHALDKAELVARILQAEGRGATMIFTRTKRTAQ 303
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ L G K+ G Q R K LK FR+G I VLV++D RG+D++ V +
Sbjct: 304 KVADDLAERG---FKVGAVHGDLGQVAREKALKKFRDGSIDVLVATDVAARGIDIDDVTH 360
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
V+NY P KTY+HR GRT RAG+ G TL+ DE+ R+ +L+ KA
Sbjct: 361 VINYQCPEDEKTYVHRIGRTGRAGRTGIAVTLVDWDELHRW-ELIDKA 407
>gi|358396993|gb|EHK46368.1| hypothetical protein TRIATDRAFT_218284 [Trichoderma atroviride IMI
206040]
Length = 863
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 166/377 (44%), Gaps = 98/377 (25%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDL 72
PW+ SP+ VS P L L P+ L+ G + F VQ A + DL
Sbjct: 274 PWLASPIRVSQDTQTPFTDLGIL-PKAARFLEQKGYTEAFAVQTAALPLLLPTNKQPGDL 332
Query: 73 CINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGL 132
+++ TGSGKTL+YALPIV+ LSN + LR LVVLPTR+L Q + +F L
Sbjct: 333 LVSAATGSGKTLAYALPIVRDLSNSVITRLRCLVVLPTRELVKQ---------AQEVFEL 383
Query: 133 IADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS------- 185
A E + + +G+A+G S+A E
Sbjct: 384 CAKAYEGEDRKR------------------------VRIGIAIGNQSLASEQDILVTKET 419
Query: 186 ----ELIKRPKLEAGICYDPEDVLQEL-----------------------QSAVDILVAT 218
E K+ + EA E+ L EL S VDIL+ T
Sbjct: 420 RYDPETYKQLEEEASSKSTSEEDLDELLTSSDTRRTNPRIGPWQGQVIDFHSKVDILICT 479
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL++HI+ T GFTL ++ +LVVDE D+LL +++Q WL VL F
Sbjct: 480 PGRLVEHIDQTPGFTLSYIRWLVVDEADKLLAQSFQGWLDVVL--------------DKF 525
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTG 336
+ +G+ R F D PY + K++LSATLT+D + L QL L P + L +G
Sbjct: 526 KVNHYGA----------RDFPDMPYSGVRKILLSATLTRDLSLLNQLALKRPKLIVLESG 575
Query: 337 E----TRYKLPERLESY 349
+ LP+ L Y
Sbjct: 576 SDVQVAEHSLPDLLREY 592
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 373 KCIVFTSSVESTHRLCTLLNHFGE-LRIKIKEYSGLQRQSVRSKTLKAFR--EGKIQVLV 429
+ ++FT S E+ RL LL + L +I + S+R KTL+AF +++++
Sbjct: 698 RALIFTKSNEAALRLSRLLTILDKSLATQISTLTSTTPTSIRRKTLRAFTTPSSPLRLII 757
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+SD + RG+D+ + +VVNYD P + Y+HR GRTARAG+ G +TL+ E F
Sbjct: 758 ASDLVARGIDIPKLPHVVNYDLPPSVAGYVHRVGRTARAGRTGCAWTLVGDGESGWF 814
>gi|404258993|ref|ZP_10962307.1| putative ATP-dependent RNA helicase [Gordonia namibiensis NBRC
108229]
gi|403402387|dbj|GAC00717.1| putative ATP-dependent RNA helicase [Gordonia namibiensis NBRC
108229]
Length = 540
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 200/468 (42%), Gaps = 107/468 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D R+ AL G + F +Q + T+ + DL + TG GKT + +P++ L
Sbjct: 25 VDERIVSALTEDGKTQTFAIQ----ELTLPLAMGGDDLIGQARTGMGKTYGFGIPLLHRL 80
Query: 95 SN---RAVRCL----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
+N VR L RAL+++PTR E+CVQ S
Sbjct: 81 ANAEASGVRPLDNTPRALIIVPTR----------------------------ELCVQVTS 112
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
L I+ DV ++AD + ++K + G Y+ + + E
Sbjct: 113 DLEIAAKNT-DV-------------------TLADGTNRMLKITSIYGGRPYEAQ--IAE 150
Query: 208 LQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
LQS VD++V TPGRL+D A +G L + LV+DE D +L
Sbjct: 151 LQSGVDVVVGTPGRLLDL--AQQGHLVLGKVSILVLDEADEMLDLG-------------- 194
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
FLP +ER P PR M+ SAT+ LA+
Sbjct: 195 -----------FLPD------------IERIMAALPTPRQT-MLFSATMPGPIVTLARTF 230
Query: 327 LHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
LH P + + +R + Y + K + +LQ+ G ++FT + +
Sbjct: 231 LHRPTHIRAENANDSAVHDRTKQYAYRAHALDKAELVARILQAEGRGATMIFTRTKRTAQ 290
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ + E K+ G Q R K L FR+G I VLV++D RG+D++ V +
Sbjct: 291 KVA---DDLAERGFKVGAVHGDLGQVAREKALGRFRDGTIDVLVATDVAARGIDIDDVTH 347
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
V+NY P KTY+HR GRT RAG+ G TL+ DE+ R+ +L+ KA
Sbjct: 348 VINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRW-ELIDKA 394
>gi|403220736|dbj|BAM38869.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 499
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 208/491 (42%), Gaps = 107/491 (21%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGP-----------GLFERDLCINSPTGSGKTLSYALPI 90
+++ I+ FP+Q E I P +F D I +PTG GKTL Y LP+
Sbjct: 46 VIKDKHITEFFPIQ-----EKIIPLLLNNTYKDRLSVFSCDFIITAPTGQGKTLCYVLPL 100
Query: 91 VQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF 150
+ + N L AL++ P+R+L Q+ +F D
Sbjct: 101 INNILNLKENRLSALIIAPSRELVKQIYE---------VFSWFID--------------- 136
Query: 151 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 210
S P D+ GL V L G S K I DP
Sbjct: 137 -SDPLTYDL-----KGNGLKVRLFYGDKSFI----------KYHRTILNDPPH------- 173
Query: 211 AVDILVATPGRLMDH-INATRGF---TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
I + TPG L+++ I+ + T HL ++V++E D +L + W+ V+ L +
Sbjct: 174 ---IAITTPGILVEYFIDFDKNHFYNTFSHLKWIVIEEVDLMLNQPLFEWVNVVVDLVNT 230
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
+ S+ + LP K+++SAT+ +++ LD
Sbjct: 231 LKRSE-SNQCSGLPQ--------------------------KILVSATVPLKSHEIDTLD 263
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVE 382
L+ P+ E +KLP+ L + + +PL L+ LL L EK +VF S V+
Sbjct: 264 LNRPILFRLDEIIFKLPKNLTQNCISTSKRSRPLVLIKLLNFLFFEKESGNVLVFFSKVD 323
Query: 383 STHRLCTLLN---HFGELRIKIKEYSGLQRQSVRSKTLKAFR-EGKIQVLVSSDAMTRGM 438
+ H + LL H + K E++ Q R++ + ++ EGKI L+ SD +RG+
Sbjct: 324 TCHTIARLLQIYVHQTKSNFKAMEFNSKLSQKDRNRVMNTYKKEGKI-CLLCSDVASRGI 382
Query: 439 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSC 498
D+ VV+YD P + TYIHRAGRTARA G + + K + + + + K +
Sbjct: 383 DLPNTTVVVSYDVPIRLSTYIHRAGRTARANNEGNLYVFVSKKDQTNYNRFMNKLKVERS 442
Query: 499 PIHSI-PSSLI 508
I++I P+ L+
Sbjct: 443 EINNIDPNGLM 453
>gi|115492615|ref|XP_001210935.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
gi|121742543|sp|Q0CZN5.1|DRS1_ASPTN RecName: Full=ATP-dependent RNA helicase drs1
gi|114197795|gb|EAU39495.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
Length = 821
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 193/430 (44%), Gaps = 117/430 (27%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLAL 115
+ ++TI L +D+ ++ TGSGKT ++ +PI++ L R V R +++PTR+LA+
Sbjct: 330 IQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAV 389
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q C N+ A + + F L V
Sbjct: 390 Q---------CYNV---------ATKLATYTDITFCQL---------------------V 410
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G S+ ++ + L KRP D+++ATPGR +DH+ + FT++
Sbjct: 411 GGFSLREQENILKKRP---------------------DVIIATPGRFIDHMRNSASFTVD 449
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L LV+DE DR+L + + L +L T +P S +T
Sbjct: 450 TLEILVLDEADRMLEDGFADELNEIL---------------TTIPK---SRQT------- 484
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE- 354
M+ SAT+T +KL ++ L+ P+ L + S L+ E
Sbjct: 485 -------------MLFSATMTDTVDKLIRVGLNRPVRLMVDSKKNT------SLTLVQEF 525
Query: 355 SKLKPL-------YLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+L+P YL+ L + + + IVF HR+ + FG L +K E G
Sbjct: 526 VRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKREAHRVRIV---FGLLGLKAAELHGS 582
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
Q R K+++ FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR GRTAR
Sbjct: 583 MSQEQRIKSVENFRDGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTAR 642
Query: 468 AGQLGRCFTL 477
AG+ GR T+
Sbjct: 643 AGRSGRACTI 652
>gi|242778909|ref|XP_002479334.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218722953|gb|EED22371.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 836
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 186/398 (46%), Gaps = 73/398 (18%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLP------CLDPRLKVALQNMGISSLFPV 54
E ++K + +P W+ +PV S ++ D P LD + L+ G S PV
Sbjct: 220 ETSEKPTYSTMPDWITNPVTKSPYDRE--DGQPVKFENISLDRTVVSKLEKHGYSEATPV 277
Query: 55 QVAVWQETIGPGLFER------DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVL 108
Q T+ P L + DLC+++ TGSGKTLSY LPI Q+L +V LRALV++
Sbjct: 278 QA-----TVIPLLLDEQHRHRGDLCVSASTGSGKTLSYVLPINQSLQRESVARLRALVIV 332
Query: 109 PTRDLALQVNSARCKYCCKNI-----FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
PTR+L Q A + C N+ G + + +++DS+ P+ +
Sbjct: 333 PTRELVKQAREA-FEACGSNLRIGTAIGSVVLKDEQQKIIRWDSVYS---PEKYNADQQ- 387
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
+ +S A E L R ++ P+ +Q + +D+L++TPGRL+
Sbjct: 388 ---------RTMSESDWA-EFDLLKYRDEVVRAGDLAPQ-YIQVARPNIDVLISTPGRLV 436
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DHI T GF+L HL +LVVDE DRLL E++Q W+ ++ + D+
Sbjct: 437 DHIRQTEGFSLRHLQWLVVDEADRLLNESFQEWVSVLMGALDKEKTANIGDS-------- 488
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG------- 336
+ R G R + PYPR K++LSATLT D KL L L +P + G
Sbjct: 489 ----VLARIG--RPIQS-PYPR--KVILSATLTNDITKLNSLRLENPKLVAIGSRNMDSN 539
Query: 337 ETRYKL--------PERLESYKLICESKLKPLYLVALL 366
E R K P +E + + + KP+YL+ LL
Sbjct: 540 EERVKHEAEQFVLPPSLMEHFVPVGDGFEKPIYLMKLL 577
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Query: 363 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFR 421
VA + G ++FT S ES RL LL+ L +I S KTLK +R
Sbjct: 666 VASASNTGVTSVLIFTKSTESAARLSHLLSLMNPSLESQIGTIVKSNNSSSSRKTLKDYR 725
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
G+I ++V++D +RG+D+ G+ V+NYD P + TY+HR GRTARAG+ G+ +TL+
Sbjct: 726 AGRISIIVATDRASRGIDLVGLGGVINYDMPTSLTTYVHRVGRTARAGKSGQAWTLVEHR 785
Query: 482 EVKRFKKLLQKADN 495
E F+K++ K++N
Sbjct: 786 EGLWFQKVIVKSEN 799
>gi|325189223|emb|CCA23746.1| DEAD box helicase putative [Albugo laibachii Nc14]
Length = 809
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 199/470 (42%), Gaps = 106/470 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A+Q M P+Q+ + I GL +RD+ + TGSGKT ++ +PI+ L +
Sbjct: 364 AIQEMRFERPSPIQM----QAIPIGLAKRDIIGIAETGSGKTAAFLIPIIAYLYHLPAVM 419
Query: 102 LR--------ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L AL++ PTR+LALQ+ K C G++ +
Sbjct: 420 LERTGEQGPLALIMAPTRELALQIEQEAIKLCKHTQVGVVGSQNRIRT------------ 467
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
LSV VG SI ED +L+ VD
Sbjct: 468 ---------------LSV---VGGQSI---------------------EDQAFKLRQGVD 488
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ----LTRSDNE 269
I++ TPGRLMD + + L Y+V+DE DR++ ++ + VL L +S+NE
Sbjct: 489 IIIGTPGRLMDCME-SHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLDNMGSLLKSENE 547
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
+ER + + V M+ SAT+ + +LA+ L H
Sbjct: 548 EEMEKQ------------------LERANNAQEFRYRVTMMFSATMPTEVERLAKTYLRH 589
Query: 330 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ----SLGE------------EK 373
P + G+ +R+E + S K L L LL S G+ +K
Sbjct: 590 PAIIKIGDEDSGKNKRIEQRVVFLNSGKKKLRLQHLLHETLSSSGQVRISRKEKVVDGQK 649
Query: 374 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
+VF + + L L G R I G + Q R ++L+ FREG VLV++D
Sbjct: 650 VMVFVNIKKECDVLGKYLAQEG-FRTTI--LHGGKSQEQREESLRGFREGFCDVLVATDV 706
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDE 482
RG+D+ V +VVNYD P+ I+ Y HR GRT RAG+ G + L ++DE
Sbjct: 707 AGRGLDIPDVTHVVNYDLPSKIENYCHRIGRTGRAGKEGVAISFLTNEDE 756
>gi|406696099|gb|EKC99395.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 436
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 173/366 (47%), Gaps = 60/366 (16%)
Query: 140 EMCVQFDSLLFISLPQVKDVFAAIAPAV-----------GLSVGLAVGQS-SIADEISEL 187
E+C +SL F ++ AAI PA+ G +V LA +S SIA ++ L
Sbjct: 34 ELCESCESLGFKHPTDIQ--VAAIPPALTGRDIIGIAQTGSAVLLAHPRSDSIAKQVQAL 91
Query: 188 IKRPKLEAGICYDPEDVLQE---LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDE 244
+ + D++ + L I+VATPGRLMDH+ T+GF+L+ L YLV+DE
Sbjct: 92 GAPIGVRTAVIVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLDE 151
Query: 245 TDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP 304
DRLL + + +L++ + +TFL
Sbjct: 152 ADRLLDLDFGPIIDKLLKVIPKER-------NTFL------------------------- 179
Query: 305 RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVA 364
SATL+ KL + L+ P+ + +++Y L Y + K YL
Sbjct: 180 ------FSATLSTKVEKLKRASLNKPIQVKV-DSKYSTVSTLMQYYVFFPEVQKDAYLFY 232
Query: 365 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGK 424
L+ L I+FTS+V+ RL +LN G I + G QS R +L F+ G
Sbjct: 233 LVNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLH---GQMSQSARLGSLNKFKSGG 289
Query: 425 IQVLVSSDAMTRGMDVEGVNNVV-NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
++LV++D +RG+D+ V+ V+ N+D P+ K Y+HR GRTARAG+ G+ TL+ + +V
Sbjct: 290 RKILVATDVASRGLDIPSVDLVIQNFDIPSNSKDYVHRVGRTARAGRSGKSITLVTQYDV 349
Query: 484 KRFKKL 489
K +
Sbjct: 350 VMLKGI 355
>gi|302917131|ref|XP_003052376.1| hypothetical protein NECHADRAFT_1180 [Nectria haematococca mpVI
77-13-4]
gi|256733315|gb|EEU46663.1| hypothetical protein NECHADRAFT_1180 [Nectria haematococca mpVI
77-13-4]
Length = 768
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 210/472 (44%), Gaps = 117/472 (24%)
Query: 10 PVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE 69
P P +S D+S F+ L P L L ++G + P+Q ++I L
Sbjct: 245 PAKPGKKS--DMSSFQAMSLSR-PIL-----RGLASVGFTKPTPIQ----SKSIPIALMG 292
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLRALVVLPTRDLALQVNSARCKYCCK 127
+DL + TGSGKT ++ +PI++ L R + R +V+ PTR+LA+Q C
Sbjct: 293 KDLVGGAVTGSGKTGAFIVPILERLLYRPKKIPTTRVVVLTPTRELAIQ---------C- 342
Query: 128 NIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 187
H++A + + F LAVG S+ + +EL
Sbjct: 343 --------HAVATKLAAYTDIKFT---------------------LAVGGLSLKVQEAEL 373
Query: 188 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
RP D+++ATPGR +DH+ + F ++ + L++DE DR
Sbjct: 374 RLRP---------------------DVIIATPGRFIDHMRNSASFNVDTVEILILDEADR 412
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
+L + + L +L T LP + +
Sbjct: 413 MLEDGFADELNEIL---------------TTLPKSRQT---------------------- 435
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY-KLICESKLKPL-YLVAL 365
M+ SAT+T ++L ++ ++ P + + + ++ + +L + K + YL +
Sbjct: 436 -MLFSATMTSTVDRLIRVGMNKPARVMVDSQKKTVGTLVQEFVRLRPGREEKRMGYLAYI 494
Query: 366 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 425
++L E+ I+F + HR + FG L + E G Q+ R +++ FR+GK+
Sbjct: 495 CKTLYRERVIIFFRQKKEAHRARII---FGLLGLSCAELHGSMNQTQRISSVEEFRDGKV 551
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
L+++D +RG+D++GV+ V+NY+ P ++ Y+HR GRTARAG+ G TL
Sbjct: 552 SYLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRKGTAITL 603
>gi|323455700|gb|EGB11568.1| hypothetical protein AURANDRAFT_2416, partial [Aureococcus
anophagefferens]
Length = 435
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 189/446 (42%), Gaps = 109/446 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ + I L RD+ + TGSGKT ++ LPI+ L + R L + + PTR+LA+Q+
Sbjct: 22 IQKAAIPVALSGRDVIGLAETGSGKTGAFGLPILHKLLEKPSR-LFGVALAPTRELAVQI 80
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ +VF A+ A+GL VG
Sbjct: 81 H---------------------------------------EVFDALGAAIGLRCVCVVGG 101
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
IA + L K P ++VATPGRL+DH+ T+GF+L
Sbjct: 102 VEIAAQALALAKLPH---------------------VVVATPGRLVDHLENTKGFSLRTC 140
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
LV+DE DR+L ++ L ++ G++ RC
Sbjct: 141 KCLVMDEADRMLSMDFEKELDAIV----------------------GAIPREGRC----- 173
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
M+ SAT+T KL + L+ P+ + + ++ +P +L+ L +K
Sbjct: 174 ----------SMLFSATMTSKVAKLQRASLYKPVKVAVND-KFAMPRQLDQRYLFVPAKH 222
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K YL A+L + +VF ++ R LL + G G Q R L
Sbjct: 223 KECYLAAVLDARRGATALVFCATCAGATRATLLLRNLG---FDAACLHGQMAQPKRLGAL 279
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ G +LV++D RG+D+ V+ V+NYD P + K Y+HR GRTARAG+ G
Sbjct: 280 HKFKAGAATILVATDVAARGLDIPAVDLVLNYDVPTHGKEYVHRVGRTARAGRKGSAIAF 339
Query: 478 LHKDEVKRFKKL-------LQKADND 496
+ + +V+ +++L L KAD D
Sbjct: 340 VTQYDVELYQRLEHLIGVKLPKADVD 365
>gi|348590699|ref|YP_004875161.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974603|gb|AEP37138.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 562
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 195/454 (42%), Gaps = 134/454 (29%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----------------S 95
P +V V ++I L +DL +++ TGSGKT ++ LP +Q L S
Sbjct: 27 PTEVQV--KSIPLALEGKDLIVSAQTGSGKTAAFMLPSIQRLLHELETRPQTEEISKAKS 84
Query: 96 NRAVRC----------LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 145
+R R ++ LV+ PTR+LA+QV A ++ I+G H
Sbjct: 85 SRRKRGKSTANPPKYGVQILVLTPTRELAMQVADATKEF----IYGFKGVH--------- 131
Query: 146 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 205
IA VG G+ Y P+ +
Sbjct: 132 -----------------IATLVG---------------------------GMAYGPQ--I 145
Query: 206 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
L V+I+VATPGRL+DHI A R L +L L++DE DR+L + + V+ T
Sbjct: 146 NSLSREVEIIVATPGRLLDHIKAGR-VKLHNLKVLILDEADRMLDMGFIHDIKNVVAETP 204
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
+ + ++ SAT + KLA+
Sbjct: 205 DEKQT--------------------------------------LLFSATFEGNTVKLAKE 226
Query: 326 DLHHP--LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 383
L P + ++ + +++ E+ Y K K L ALL+ ++ IVFT +
Sbjct: 227 MLKSPERIVVSDHKEKHQNIEQFLFYADTVGHKFK--LLEALLRDPDVDQTIVFTKTKRG 284
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
C L +L K E G Q R++T++A ++G+I+VLV++D RG+D++G+
Sbjct: 285 A---CDLAKRLKDLDFKAGELHGDMNQGQRNRTIQALQKGRIKVLVATDVAARGIDIQGI 341
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
++VVNYD P + Y+HR GRT RAG+ GR +TL
Sbjct: 342 SHVVNYDLPMQAEDYVHRIGRTGRAGRDGRAYTL 375
>gi|167646708|ref|YP_001684371.1| DEAD/DEAH box helicase [Caulobacter sp. K31]
gi|167349138|gb|ABZ71873.1| DEAD/DEAH box helicase domain protein [Caulobacter sp. K31]
Length = 678
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 198/466 (42%), Gaps = 120/466 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P A+ + G ++ P+Q A I L +D+ + TG+GKT ++ LP++ L
Sbjct: 9 LSPTTLQAVADTGYTTATPIQAAA----IPVALAGQDVLGIAQTGTGKTAAFTLPLIDKL 64
Query: 95 SN-RA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
N RA R RALV+ PTR+LA QV S+ KY
Sbjct: 65 MNGRAKARMPRALVIAPTRELADQVASSFEKY---------------------------- 96
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
A LS L +G S D+ ++L V
Sbjct: 97 -----------AKGTKLSWALLIGGVSFGDQ---------------------EKKLDRGV 124
Query: 213 DILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
D+L+ATPGRL+DH RG + + +LVVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFE--RGKLLMTGVQFLVVDEADRMLDMG------------------- 163
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
F+P +ER FK P P+ + SAT+ + +L + L P+
Sbjct: 164 ------FIPD------------IERIFKMTP-PKKQTLFFSATMPPEITRLTKQFLKDPV 204
Query: 332 FL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
+ TT E +L ++ S + K K L L AL++ E IVF +
Sbjct: 205 RIEASRPATTNENITQLMVKVPS----SDPKAKRLALRALIEKAQIETGIVFCNRKTEVD 260
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
+ L G G QS R+KTL AFR+G +++LV+SD RG+D+ V++
Sbjct: 261 VVAKSLKSHG---FDAAAIHGDLDQSQRTKTLAAFRDGSLKILVASDVAARGLDIPAVSH 317
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
V NYD P + Y+HR GRT RAG+ G + L+ + K F K+++
Sbjct: 318 VFNYDVPHHADDYVHRIGRTGRAGRSGVTYMLVTPADDKGFDKVVK 363
>gi|224137340|ref|XP_002322533.1| predicted protein [Populus trichocarpa]
gi|222867163|gb|EEF04294.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 195/462 (42%), Gaps = 114/462 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SN 96
A +N+G +Q +E I L +DL + TGSGKT ++ LP ++ +
Sbjct: 24 ACENLGWKKPTKIQ----EEAIPYALQGKDLIGVAATGSGKTGAFVLPTLEAILKDSQER 79
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
++V+ V+ PTR+LA+Q IAE
Sbjct: 80 KSVQPFFVCVLSPTRELAIQ---------------------IAEQ--------------- 103
Query: 157 KDVFAAIAPAVGLS-VGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
F A+ +G+ V L G+ + I KRP ++
Sbjct: 104 ---FEALGSGIGVRCVVLVGGEDMLQQSIVLAKKRPH---------------------VI 139
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
V TPGRL DH++ T+GF+L L YL++DE DRLL ++ L +L
Sbjct: 140 VGTPGRLADHLSNTKGFSLHALKYLILDEADRLLSMDFEKSLDEIL-------------- 185
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLT 334
K PR + L SAT+T KL + L +P+ +
Sbjct: 186 -------------------------KAIPRNRRTYLFSATMTNKAGKLQRACLRNPVKIE 220
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y + + LE + LK YLV +L S +VFT + T L +L
Sbjct: 221 AA-FKYSIVDTLEQGFYFMPAALKDCYLVHVLSSKKGATSMVFTRTCRETDFLALVLRKL 279
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I I +G QS R L F+ G+ +L+ +D +RG+D+ V+ VVNY+ P
Sbjct: 280 GLGAIPI---NGQMSQSNRLGALNKFKAGEFNILICTDVASRGLDILSVDVVVNYNIPTN 336
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 496
K Y HR GRTARAG+ G +L+++ ++ FK++ + +D
Sbjct: 337 AKDYFHRVGRTARAGRSGLAISLVNQFDIGPFKQIEKHIGDD 378
>gi|393245773|gb|EJD53283.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 463
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 178/418 (42%), Gaps = 103/418 (24%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
D+ + TGSGKT ++ALPI+Q L R L A + PTR+LA Q+ +
Sbjct: 64 DIIGVAETGSGKTAAFALPILQKLWEDP-RPLFACCIAPTRELAFQIAQS---------- 112
Query: 131 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 190
F A+ ++G+ V + +G ++ L KR
Sbjct: 113 -----------------------------FEALGGSLGVRVAVIIGGVKEIEQQIALSKR 143
Query: 191 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 250
P I+VA PGRL H+ T+GF+L L YLV+DE DRLL
Sbjct: 144 PH---------------------IIVAAPGRLNWHLENTKGFSLRTLKYLVLDEADRLLD 182
Query: 251 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 310
+ + +L++ + T+L
Sbjct: 183 LDFGKDIDKLLKVLPKERH-------TYL------------------------------- 204
Query: 311 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 370
SAT+T KL + L +P + ++Y L Y L+ K + L+ L SL
Sbjct: 205 FSATMTDKVEKLQRASLSNPKRVAVS-SKYSTVSTLLQYYLLVPLPQKEVNLIYLCNSLA 263
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 430
E+ I+FT + R+ +L G + + G QS R L F+ G ++LV+
Sbjct: 264 EKSIIIFTRTQHDAQRVSIILRTLGFSAVPLH---GALSQSARLGALAKFKAGGRKILVA 320
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
+D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G+ T + + +V+ FK+
Sbjct: 321 TDVASRGLDIPHVDIVINYDVPTNSKDYIHRVGRTARAGRAGKSVTFVTQYDVEVFKR 378
>gi|356520446|ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Glycine max]
Length = 438
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 187/429 (43%), Gaps = 103/429 (24%)
Query: 56 VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-RCLRALVVLPTRDLA 114
+ + E I L +D+ + TG GKT ++ALPI+ L + V+ PTR+LA
Sbjct: 33 LKIXTEAIPIALEGKDVTGLAQTGYGKTGAFALPILHALLEAPRPKHFFDCVLSPTRELA 92
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
+Q IAE F A+ +G+ +
Sbjct: 93 IQ---------------------IAEQ------------------FEALGSXIGVKCAVL 113
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
VG + + ++ K+P I+V TP R++DH+ T+GF+L
Sbjct: 114 VGGIDMVQQSIKIAKQP---------------------HIIVGTPRRVLDHLKHTKGFSL 152
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
L YLV+DE DRLL E ++ L +LQ+ + + TFL
Sbjct: 153 GRLKYLVLDEADRLLNEDFEESLNEILQMIPRERK-------TFL--------------- 190
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE 354
SAT+T+ KL ++ L +P+ + ++Y + L+ L
Sbjct: 191 ----------------FSATMTKKVQKLQRVCLRNPVKIEA-SSKYSTVDTLKQQYLFLP 233
Query: 355 SKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRS 414
+K K Y V +L + +VFT + ++T L +L + G I I +G QS R
Sbjct: 234 AKHKDCYFVYILTEMSGSTSMVFTCTCDATRLLALILRNLGLKAIPI---NGHMSQSKRL 290
Query: 415 KTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRC 474
F+ G+ +L+ +D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G
Sbjct: 291 GASNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRFGVA 350
Query: 475 FTLLHKDEV 483
+L+++ E+
Sbjct: 351 ISLVNQYEL 359
>gi|330803884|ref|XP_003289931.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
gi|325079973|gb|EGC33549.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
Length = 501
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 190/455 (41%), Gaps = 110/455 (24%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
RD+ ++ TGSGKT S+A+PI+ LS A+V+ PTR+LA+Q
Sbjct: 43 RDIIASAKTGSGKTASFAIPILNLLSEDPYGVF-AVVLTPTRELAVQ------------- 88
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIK 189
IAE F+AI + + V +G + L K
Sbjct: 89 --------IAEQ------------------FSAIGAPMNVQVSTVIGGIDTVKQALILDK 122
Query: 190 RPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
RP I+VATPGRL H+ L+ +LV+DE DRLL
Sbjct: 123 RPH---------------------IIVATPGRLASHLTNGLKIALKFCKFLVLDEADRLL 161
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
E ++ + ++L+ +LP P + +
Sbjct: 162 GEDFELEIASILE---------------YLP---------------------PPTQRQTL 185
Query: 310 VLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
+ SAT+T + KL + L+ P F+ ++Y + L+ + ++ K YLV LL+
Sbjct: 186 LFSATMTNNLKKLESISLNSP-FIFEDNSKYDTVDTLKQEYIYMPAQAKDCYLVYLLKKH 244
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
+ IVF ++ S + +LN +L I Q R LK F+ GK++VL+
Sbjct: 245 IGQSVIVFINNCYSVEAVKGMLN---KLDIPAVSLHSFLDQKARLSALKVFKSGKVKVLI 301
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
++D +RG+D+ V V+NY K YIHR GRTAR G+ GR + + +V+ K +
Sbjct: 302 ATDVASRGLDIPDVEMVINYKLSNSSKDYIHRVGRTARFGKSGRAISFITPHDVQLIKNI 361
Query: 490 ---------LQKADNDSCPIHSIPSSLIESLRPVY 515
L K D+D H SS + V+
Sbjct: 362 ELVIKKELELYKTDDDEVFRHLKESSTARKIVEVH 396
>gi|399077018|ref|ZP_10752254.1| DNA/RNA helicase, superfamily II [Caulobacter sp. AP07]
gi|398036112|gb|EJL29334.1| DNA/RNA helicase, superfamily II [Caulobacter sp. AP07]
Length = 663
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 196/465 (42%), Gaps = 118/465 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P A+ + G ++ P+Q A I L +D+ + TG+GKT ++ LP++ L
Sbjct: 9 LSPTTLQAVADTGYTTATPIQAAA----IPVALAGQDVLGIAQTGTGKTAAFTLPMIDKL 64
Query: 95 -SNRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
S RA R RALV+ PTR+LA QV S+ KY
Sbjct: 65 ASGRAKARMPRALVIAPTRELADQVASSFEKY---------------------------- 96
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
A LS L +G S D++ ++L V
Sbjct: 97 -----------AKGTKLSWALLIGGVSFGDQV---------------------KKLDRGV 124
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
D+L+ATPGRL+DH G + + +VVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFERG-GLLMTGVQIMVVDEADRMLDMG-------------------- 163
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
F+P +ER FK P P+ + SAT+ + +L + L P+
Sbjct: 164 -----FIPD------------IERIFKMTP-PKKQTLFFSATMPPEITRLTKQFLRDPVR 205
Query: 333 L------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+ TT E +L ++ S + K K L L AL++ E IVF +
Sbjct: 206 IEASRPATTNENITQLMVKVPS----SDPKAKRLALRALIEKAQIETGIVFCNRKTEVDV 261
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
+ L G G QS R KTL AFR+G +++LV+SD RG+D+ V++V
Sbjct: 262 VAKSLKSHG---FDAAAIHGDLDQSQRMKTLAAFRDGSLKILVASDVAARGLDIPAVSHV 318
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
NYD P + Y+HR GRT RAG+ G + L+ + K F K+++
Sbjct: 319 FNYDVPHHADDYVHRIGRTGRAGRSGIAYMLVTPADDKGFDKVVK 363
>gi|440299556|gb|ELP92108.1| ATP-dependent rRNA helicase rrp3, putative [Entamoeba invadens IP1]
Length = 433
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 195/457 (42%), Gaps = 108/457 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P + ++++G P+Q + +I L +D+ + TGSGKT ++ LP++ L
Sbjct: 22 PEVIKVVEHLGYKMPTPIQSS----SIPVALKRKDIIGIAQTGSGKTAAFLLPMLNHLLN 77
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+N R +VV PTR+LA QV
Sbjct: 78 TNERKRDFFCIVVEPTRELAAQV------------------------------------I 101
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+V D A P GL L VG + L K+P ++
Sbjct: 102 EVLDRMAEALP--GLVSCLLVGGMDEMKQAVLLAKKP---------------------NV 138
Query: 215 LVATPGRLMDHINATRGFT--LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
+V TPGRL+ HIN T+G + L+ +LV+DE D+LL + A
Sbjct: 139 IVCTPGRLVYHINNTKGVSQSLQKTRFLVIDEADKLLDMDFAA----------------- 181
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
+++ + P R M+ SAT++ KL + L HP+
Sbjct: 182 --------------------DIDKLIESVPKQR-TTMLFSATMSSRVEKLQRASLVHPVK 220
Query: 333 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
+ E +Y + L L K + YL+A+LQ +G + I+FT RL +L
Sbjct: 221 IKQSEQKYSTVDTLRQEYLFIPFKYRDGYLMAILQKVGAQSAIIFTMKCSGNTRLVLMLR 280
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G I + +G Q R L+ F+ GK +LV++D +RG+D+ V+ V+NYD P
Sbjct: 281 QLGYEAIPL---NGKMSQQKRLLALEKFKSGKRSLLVATDVASRGLDIPDVDFVINYDCP 337
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
K YIHR GRTARAG+ G T++ + ++ ++++
Sbjct: 338 VEPKDYIHRVGRTARAGKSGMAITIVTQYSLEFYQRI 374
>gi|260808869|ref|XP_002599229.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
gi|229284506|gb|EEN55241.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
Length = 436
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 187/432 (43%), Gaps = 119/432 (27%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
+ E I L +D+ + TGSGKT ++ALPI+Q+L + R L ALV+ PTR+LA Q+
Sbjct: 47 IQTEAIPLALEGKDVIGLAETGSGKTGTFALPILQSLLEKPQR-LFALVLTPTRELAFQI 105
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
+ + F A+ ++G+ + VG
Sbjct: 106 S---------------------------------------EQFEALGSSIGIKCVVVVGG 126
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
+ + +L K+P +++ATPGRL+DH+ T+GF L L
Sbjct: 127 IDMVTQALQLAKKP---------------------HVIIATPGRLVDHLENTKGFNLRAL 165
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
YL VD+ +++ +L
Sbjct: 166 KYL-VDKILKVIPRERHTYL---------------------------------------- 184
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL 357
SAT+T+ KL + L +P+ + ++YK + L+ L SK
Sbjct: 185 -------------FSATMTKKVAKLQRASLSNPVKVEV-NSKYKTVDTLQQSYLFIPSKY 230
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K +YLV++L L +VF S+ +T R LL + G I + G Q+ R L
Sbjct: 231 KDVYLVSILNELAGNSFMVFCSTCNNTQRTAFLLRNLGFNAIPL---HGQLSQNSRLGAL 287
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ +L+++D +RG+D+ V+ V+N+D P + K YIHR GRTARAG+ G+ T
Sbjct: 288 HKFKAKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITF 347
Query: 478 LHKDEVKRFKKL 489
+ + +V+ ++++
Sbjct: 348 VTQYDVELYQRI 359
>gi|149276646|ref|ZP_01882789.1| possible ATP-dependent RNA helicase [Pedobacter sp. BAL39]
gi|149232315|gb|EDM37691.1| possible ATP-dependent RNA helicase [Pedobacter sp. BAL39]
Length = 376
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 205/469 (43%), Gaps = 110/469 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L +AL + F A+ Q I L ++D+ + TGSGKT Y LP++ L
Sbjct: 8 LTPALLIALADQQ----FNEPTAIQQTVIPAILAKKDVLGIAKTGSGKTAGYVLPVLTNL 63
Query: 95 SNR---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
R LV++PTR+LA
Sbjct: 64 QQSLGPKNRHANVLVLVPTRELA------------------------------------- 86
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
QVK+VF + + + E +K + G+ + + + LQ
Sbjct: 87 --EQVKEVF-----------------KTFSTSLPEAVKTLAVYGGVSINTQ--MMALQ-G 124
Query: 212 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
V++LV TPGRL++ + A L + L++DE D++L ++ + ++ L + +N
Sbjct: 125 VNVLVGTPGRLLELV-AANSVNLSSVETLILDEADKMLNLGFKEEVNKIIALLPAKRQN- 182
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
++ SATL++D + QL LH P+
Sbjct: 183 -------------------------------------VLFSATLSKDIEHIHQLLLHDPV 205
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
+ E L ++ ++ E K P +L +L++ ++ +VF SS+ H++ ++
Sbjct: 206 VVKIEEGEDSLELITQTAYIVSEDKKGP-FLRSLIKKHRMKQVLVFASSI---HQVEAIV 261
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
N + +I K + + Q R+ +L F+ G+I+VLV++D M RG+D++G+ V+NY+
Sbjct: 262 NKLQKNKIDAKAFHSKKSQGNRTDSLAHFKFGRIKVLVATDLMARGIDIDGLPYVINYEL 321
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 500
P K Y+HR GRT RAG G +L+ +E+ F +++QK P+
Sbjct: 322 PRSPKDYVHRIGRTGRAGNTGEAISLVSHNELHHF-EVIQKKMGKQVPL 369
>gi|296117857|ref|ZP_06836440.1| putative ATP-dependent RNA helicase [Corynebacterium ammoniagenes
DSM 20306]
gi|295969088|gb|EFG82330.1| putative ATP-dependent RNA helicase [Corynebacterium ammoniagenes
DSM 20306]
Length = 450
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 191/472 (40%), Gaps = 120/472 (25%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
L GI+S FP+Q A + L +D+ PTGSGKT ++ LP++ L+
Sbjct: 17 LAQQGITSPFPIQEAAIPDA----LAGKDILGRGPTGSGKTFTFGLPMIARLAGSGASKP 72
Query: 103 ---RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LV+ PTR+LA+Q+ + D
Sbjct: 73 GRPRGLVLAPTRELAIQIQQ------------------------RLDE------------ 96
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
A A+GL V VG +I + I +L RP VDILVATP
Sbjct: 97 ---PANAMGLRVLSVVGGVNINNHIRQL-ARP--------------------VDILVATP 132
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR D +N + +L +DE D++ + + +L LT DN R
Sbjct: 133 GRAQDLVNQKK-LSLSDATLTALDEADQMADMGFLPQVKKLLALT-PDNAQR-------- 182
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
++ SATL D NKL +H P+ +T +
Sbjct: 183 -----------------------------LLFSATLDGDVNKLVSRFMHDPVTHSTAPVQ 213
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
+ + ++ Y + + V L + E K I+F + R L G I
Sbjct: 214 ASV-DTMKHYVFFVGER-EDRNKVVLRIAAREGKTIMFMRTKHGVDRQAKKLRRAG---I 268
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
G + Q+ RS TL+ F +G + VLV++D RG+DV V+ VV+ D PA K Y+
Sbjct: 269 PAMGLHGDKGQNTRSTTLQGFADGSVSVLVATDIAARGIDVHDVSLVVHVDPPAEHKAYL 328
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA---------DNDSCPIHS 502
HRAGRTARAG+ G TL+ ++ KL+ KA DS P H+
Sbjct: 329 HRAGRTARAGEAGSVVTLVMNEQRDEVAKLIDKAGVDAETIDISTDSSPAHN 380
>gi|452002395|gb|EMD94853.1| hypothetical protein COCHEDRAFT_1128751 [Cochliobolus
heterostrophus C5]
Length = 815
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 207/482 (42%), Gaps = 111/482 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G + P+Q + + + +D+ + TGSGKT ++ +PI++ L + +
Sbjct: 303 GLASVGFTEPTPIQ----SKAVPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRQKKI 358
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R + +PTR+LA+Q C N+ A F + F
Sbjct: 359 PTTRVAIFMPTRELAVQ---------CFNV---------ATKLASFTDITF--------- 391
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L G S ++ + L RP D+++ATP
Sbjct: 392 ------------ALMAGGFSSREQEAVLKTRP---------------------DVVIATP 418
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH++ T F +E+L LV+DE DR+L E +++ L +L T +
Sbjct: 419 GRFIDHMHNTAAFQVENLEILVLDEADRMLEEGFESQLNEIL---------------TTI 463
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P + + M+ SAT+T +KL ++ + P+ L +
Sbjct: 464 PKSRQT-----------------------MLFSATMTSSVDKLIRIGMDKPVRLMVDSKK 500
Query: 340 YKLPERLESYKLICESK--LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + + + + K + YL+ + + + EK IVF + HR+ + G
Sbjct: 501 QTVKGLTQEFVRLRQGKEDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCG-- 558
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R + ++AFR GK L+++D +RG+D++ V+ V+NY+ P +
Sbjct: 559 -LKASELHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVSTVINYEAPQTHEI 617
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLRPVY 515
Y+HR GRTARAG+ GR TL + + K K+ ++ + + S +P+ E
Sbjct: 618 YLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVKASREQGAKVVSRQVPAEETEKWMKKI 677
Query: 516 KS 517
KS
Sbjct: 678 KS 679
>gi|377572295|ref|ZP_09801385.1| putative ATP-dependent RNA helicase [Gordonia terrae NBRC 100016]
gi|377530391|dbj|GAB46550.1| putative ATP-dependent RNA helicase [Gordonia terrae NBRC 100016]
Length = 539
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 209/500 (41%), Gaps = 112/500 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D R+ AL G + F +Q + T+ L DL + TG GKT + +P++ L
Sbjct: 25 VDERIVSALAADGKTHTFAIQ----ELTLPLALEGHDLIGQARTGMGKTFGFGIPLLHRL 80
Query: 95 SN---RAVRCL----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
++ VR L RALV++PTR E+CVQ
Sbjct: 81 AHAEETGVRPLDNTPRALVIVPTR----------------------------ELCVQVTG 112
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
L ++ P + + ++AD +K + G Y E + E
Sbjct: 113 DLQVAAPSL--------------------EVTLADGRKRPLKVTSIYGGRPY--ESQIAE 150
Query: 208 LQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
LQS VD++V TPGRL+D A +G L + LV+DE D +L
Sbjct: 151 LQSGVDVVVGTPGRLLDL--AQQGHLVLGKVSILVLDEADEMLDLG-------------- 194
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
FLP +ER P PR M+ SAT+ LA+
Sbjct: 195 -----------FLPD------------IERIMSALPTPRQT-MLFSATMPGPIVTLARTF 230
Query: 327 LHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
L+ P + + +R + Y + K + +LQ+ G ++FT + +
Sbjct: 231 LNRPTHIRAENANDSAVHDRTKQYAYRAHALDKAELVARILQADGRGATMIFTRTKRTAQ 290
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ + E K+ G Q R K LK FR+G I VLV++D RG+D++ V +
Sbjct: 291 KVA---DDLAERGFKVGAVHGDLGQVAREKALKRFRDGTIDVLVATDVAARGIDIDDVTH 347
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 505
V+NY P KTY+HR GRT RAG+ G TL+ DE+ R+ +L+ KA N P
Sbjct: 348 VINYQCPEDDKTYVHRIGRTGRAGRTGIAVTLVDWDELHRW-ELIDKALNLGIPDPPETY 406
Query: 506 SLIESLR-----PVYKSGDV 520
S E LR P K+G V
Sbjct: 407 STSEHLRSDLSIPESKTGRV 426
>gi|156083174|ref|XP_001609071.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796321|gb|EDO05503.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 454
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 188/437 (43%), Gaps = 104/437 (23%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P+Q+A I L RD+ + TGSGKT ++ +P++ L R + +V+ P+R
Sbjct: 57 PIQMAA----IPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQR-IYCVVLAPSR- 110
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
E+C Q+ + F A++ ++ L V
Sbjct: 111 ---------------------------ELC-----------EQIAEQFRALSSSIALQVC 132
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ +G + + S L KRP ++VA+PGRL DH+ T+GF
Sbjct: 133 VIIGGVDMVHQASALAKRPH---------------------VIVASPGRLADHVENTKGF 171
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L + LV+DE DRLL + + L ++ ++ + TFL
Sbjct: 172 SLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQ-------TFL------------- 211
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ +KL ++ L P+ + + +Y E L+ L+
Sbjct: 212 ------------------FSATMTKKLSKLQKMALKDPISVQVDD-KYSTAENLDQRFLL 252
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K YL ALL IVF + + R L I G Q+
Sbjct: 253 VPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQRCAAYLKGLKFTTICKVCLHGKMTQAD 312
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
RS+ L+ F+ G + +LV+++ RG+D+ V V+N+D P K YIHR GRTARAG+ G
Sbjct: 313 RSRALQIFKTGSVNILVATEVGGRGLDLPMVELVINFDIPECSKDYIHRVGRTARAGRSG 372
Query: 473 RCFTLLHKDEVKRFKKL 489
T++ + +V+ F+++
Sbjct: 373 LALTVVTQYDVELFQRI 389
>gi|71031306|ref|XP_765295.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68352251|gb|EAN33012.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 470
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 195/449 (43%), Gaps = 118/449 (26%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L +D+ + TGSGKT ++ +PI+Q L + R L +L++ PTR+
Sbjct: 64 PTKIQI--EAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQR-LFSLILAPTRE 120
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
L+LQ+ K+ ++ +GL V
Sbjct: 121 LSLQI---------------------------------------KEQLISLGSEIGLDVC 141
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L +G + + +L K+P I+V +PGR+ DH+ T+GF
Sbjct: 142 LILGGLDMVSQALQLSKKP---------------------HIIVGSPGRIADHLQNTKGF 180
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+LE + YLV+DE D+LL +D ++ + T LP
Sbjct: 181 SLETIKYLVLDEADKLLS---------------TDFDDSLNKIITSLP------------ 213
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
KDK V + SAT+T KL ++ L P+ + T+Y E L L+
Sbjct: 214 ------KDK-----VTYLYSATMTSKITKLQKVTLMKPIQINVN-TKYHTSEHLIQKYLL 261
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K YL +L +VF ++ ++ ++ L + L K G Q
Sbjct: 262 IPLKFKYTYLACILWKYSTSTIMVFCNTCLTSQKVTLFLQN---LSFKSVCLHGKLSQIQ 318
Query: 413 RSKTLKAFREGKIQ-------------VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
R +L +F+ GK+Q +LV +D +RG+D+ V+ V+N+D P K YI
Sbjct: 319 RLNSLNSFKTGKLQPIPQPHIISGLFNILVVTDVGSRGLDIPFVDLVINFDVPNTSKDYI 378
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKK 488
HR GRTARAG+ G TL+ + +++ F++
Sbjct: 379 HRVGRTARAGKSGISLTLITQYDIESFQR 407
>gi|357013998|ref|ZP_09078997.1| DEAD/DEAH box helicase domain-containing protein, partial
[Paenibacillus elgii B69]
Length = 406
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 186/439 (42%), Gaps = 108/439 (24%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA 98
L A+Q G + P+Q E I L D+ + TG+GKTL++ALPI++ + N A
Sbjct: 15 LAEAMQKHGYNEPTPIQ----SEAIPVALAGHDIIAQAQTGTGKTLAFALPILENI-NPA 69
Query: 99 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
++AL+V PTR+LA+ Q+ +
Sbjct: 70 NPNVQALIVTPTRELAI---------------------------------------QITE 90
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
AP GL V A G D E +++L+ + I+VAT
Sbjct: 91 EIKRWAPLKGLRVLSAYG---------------------GQDVERQIRKLEGNIHIIVAT 129
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL+DH+ L L LV+DE D++L + +LP V+++ +
Sbjct: 130 PGRLLDHLR-RETVQLHKLSVLVLDEADQML---HMGFLPEVVEII------------SV 173
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
PS R ++ SAT+ +LA+ + P+ +
Sbjct: 174 TPS-----------------------RRQTLLFSATMPPRIRQLAKEYMRQPVEIEVKSK 210
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
R L E +E + + K L L + + EE + + R L+N E
Sbjct: 211 RVTLDE-IEQVVIQTTDRGK---LETLCKLIDEENPYLAMIFCRTKLRASKLMNELAERG 266
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
E G Q+ R + +K FRE KIQ+LV++D RG+DVEG+ +V NYD P ++Y
Sbjct: 267 YSCDELHGDLTQAKREQVMKRFREAKIQLLVATDIAARGLDVEGITHVFNYDIPHDAESY 326
Query: 459 IHRAGRTARAGQLGRCFTL 477
IHR GRT RAGQ G+ FT
Sbjct: 327 IHRIGRTGRAGQTGKAFTF 345
>gi|399116968|emb|CCG19780.1| ATP-dependent rna helicase [Taylorella asinigenitalis 14/45]
Length = 562
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 193/454 (42%), Gaps = 134/454 (29%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL------------------ 94
P +V V ++I L +DL +++ TGSGKT ++ LP +Q L
Sbjct: 27 PTEVQV--KSIPLALEGKDLIVSAQTGSGKTAAFMLPSIQRLLHELETRPQTEEISKAKS 84
Query: 95 ---------SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQF 145
+N ++ LV+ PTR+LA+QV A ++ I+G H
Sbjct: 85 SRRKKGKPTANPPKYGVQILVLTPTRELAMQVADATKEF----IYGFKGVH--------- 131
Query: 146 DSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 205
IA VG G+ Y P+ +
Sbjct: 132 -----------------IATLVG---------------------------GMAYGPQ--I 145
Query: 206 QELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
L V+I+VATPGRL+DHI A R L +L L++DE DR+L + + V+ T
Sbjct: 146 NSLSREVEIIVATPGRLLDHIKAGR-VKLHNLKVLILDEADRMLDMGFIHDIKNVVAETP 204
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
+ + ++ SAT + KLA+
Sbjct: 205 DEKQT--------------------------------------LLFSATFEGNTVKLAKE 226
Query: 326 DLHHP--LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 383
L P + ++ + +++ E+ Y K K L ALL+ ++ IVFT +
Sbjct: 227 MLKSPERIVVSDHKEKHQNIEQFLFYADTVGHKFK--LLEALLRDPDVDQTIVFTKTKRG 284
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
C L +L K E G Q R++T++A ++G+I+VLV++D RG+D++G+
Sbjct: 285 A---CDLAKRLKDLDFKAGELHGDMNQGQRNRTIQALQKGRIKVLVATDVAARGIDIQGI 341
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
++VVNYD P + Y+HR GRT RAG+ GR +TL
Sbjct: 342 SHVVNYDLPMQAEDYVHRIGRTGRAGRDGRAYTL 375
>gi|294676409|ref|YP_003577024.1| ATP-dependent RNA helicase SrmB [Rhodobacter capsulatus SB 1003]
gi|294475229|gb|ADE84617.1| ATP-dependent RNA helicase SrmB [Rhodobacter capsulatus SB 1003]
Length = 548
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 195/454 (42%), Gaps = 118/454 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LDP + A+ + G + P+Q I P L RD+ + TG+GKT S+ LP+V L
Sbjct: 9 LDPAVLRAIADAGYETPTPIQAGA----IPPALEGRDVLGIAQTGTGKTASFTLPMVTML 64
Query: 95 SN-RA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
S+ RA R R+LV+ PTR+LA Q
Sbjct: 65 SSGRARARMPRSLVLCPTRELAAQ------------------------------------ 88
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
V + F A L+ L +G G+ + +D L + V
Sbjct: 89 ---VAENFDTYAKYTRLTKALLIG-------------------GVSFGEQDKL--IDRGV 124
Query: 213 DILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
D+L+ATPGRL+DH RG L + +VVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFE--RGKLLLTGVQIMVVDEADRMLDMG------------------- 163
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
F+P +ER F+ P+ R + SAT+ + ++ LH P
Sbjct: 164 ------FIPD------------IERIFQLTPFTRQT-LFFSATMAPEIERITNTFLHAPA 204
Query: 332 FL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE--KCIVFTSSVES 383
+ TT ET + ++ + +K K L A+++S GE I+F +
Sbjct: 205 RIEVARQATTSETITQKLIQITPPRRDQSAKAKRELLRAIIKSEGEACTNAIIFCNRKTD 264
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
+ L G G QS+R+KTL AFR+G +Q+L++SD RG+D+ V
Sbjct: 265 VDIVAKSLKTHG---FNAAPIHGDLDQSLRTKTLDAFRDGSLQLLIASDVAARGLDIPAV 321
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
++V NYD P++ + Y+HR GRT RAG+LG +++
Sbjct: 322 SHVFNYDLPSHAEDYVHRIGRTGRAGRLGTAYSI 355
>gi|34782983|gb|AAH12461.2| DDX51 protein, partial [Homo sapiens]
Length = 186
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S
Sbjct: 6 CSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQ 63
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY+HR GRTARAG+ G
Sbjct: 64 RRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTG 123
Query: 473 RCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 124 QAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 167
>gi|54024485|ref|YP_118727.1| RNA helicase [Nocardia farcinica IFM 10152]
gi|54015993|dbj|BAD57363.1| putative RNA helicase [Nocardia farcinica IFM 10152]
Length = 518
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 200/469 (42%), Gaps = 117/469 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-- 99
AL+ GI + FP+Q A + L +D+ PTGSGKTL++ LP++ L+ A
Sbjct: 44 ALRRNGIDAPFPIQAATVPDA----LAGKDVLGRGPTGSGKTLAFGLPMLVRLAGNAAAP 99
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R R LV++PTR+LA Q+ E + +L
Sbjct: 100 RRPRGLVLVPTRELAAQI----------------------ERALDEPAL----------- 126
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
A+GL V VG + I + L + VD+L+ATP
Sbjct: 127 ------ALGLRVASVVGGAPIKRQADRLAR---------------------GVDLLIATP 159
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL---TRSDNENRFSDAS 276
GRL D I A L+ + +DE D + A +LP V +L T +D +
Sbjct: 160 GRLSDLI-AQGAAALDDVSITALDEADHM---ADMGFLPQVTRLLDRTPADGQ------- 208
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
+++ SATL + +KL + L +P+ +T
Sbjct: 209 -------------------------------RLLFSATLDGEVDKLVKRYLRNPVTHSTA 237
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ S+ L+ K ++A + + E I+F + RL L G
Sbjct: 238 PPSASVA--TMSHHLLYVRKADKRAVIAEIAAR-EGLTILFVRTKHGADRLAKQLRAAG- 293
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I G + Q+ R++TL AF +G + VLV++D RG+ V+G++ VV+ D PA K
Sbjct: 294 --IAAGALHGGKAQNNRTRTLAAFADGSVPVLVTTDVAARGIHVDGISLVVHADPPAEPK 351
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 505
Y+HRAGRTARAG+ G TL+ +DE +K+ +KA D ++ P
Sbjct: 352 AYLHRAGRTARAGEDGVVVTLVTEDERADVEKMTRKAGVDVVGVNVTPG 400
>gi|149757285|ref|XP_001503455.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Equus caballus]
Length = 483
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 194/447 (43%), Gaps = 114/447 (25%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR--AVR 100
+ +G+ PVQ+ P + E C+ + TGSGKT ++ LPI+Q LS +
Sbjct: 18 RQLGLKQPTPVQLGCI-----PAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIF 72
Query: 101 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 160
CL V+ PTR+LA Q IAE F
Sbjct: 73 CL---VLTPTRELAYQ---------------------IAEQ------------------F 90
Query: 161 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 220
+ +GL + VG + + EL ++P +++ATPG
Sbjct: 91 RVLGKPLGLKDCIIVGGMDMVAQALELSRKP---------------------HVVIATPG 129
Query: 221 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 280
RL DH+ ++ F+++ + +LV+DE DRLL E +D + L
Sbjct: 130 RLADHLRSSSTFSIKKIRFLVLDEADRLL-------------------EQGCTDFTVDLE 170
Query: 281 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 340
+ ++ R+ ++ SATLT +L L + P F +
Sbjct: 171 AILAAVPARRQT----------------LLFSATLTDTLRELQGLATNQPFFWE-AQAPV 213
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGE 396
+ E+L+ L+ K+K YLV L+Q+ +E I+FT++ ++ LC +L FG
Sbjct: 214 RTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHQDWSIIIFTNTCKTCQILCMMLRKFGF 273
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
+ + RQ R L F+ ++L+++D +RG+D+ V V+N++ P K
Sbjct: 274 PAVAL---HSTMRQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPK 330
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEV 483
YIHR GRTARAG+ G+ TL+ + ++
Sbjct: 331 IYIHRVGRTARAGRQGQAITLVTQYDI 357
>gi|341897829|gb|EGT53764.1| hypothetical protein CAEBREN_24102 [Caenorhabditis brenneri]
Length = 485
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 157/308 (50%), Gaps = 45/308 (14%)
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
L+S D++VATPGRL+DH++ + F L + LV+DE DR+L EA++ + +++L
Sbjct: 13 LRSGPDVVVATPGRLIDHLHNSPNFNLGAIEVLVLDEADRMLEEAFRDQMNELIRLC--- 69
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
ENR + ++ SAT+T++ ++LA + L
Sbjct: 70 AENRQT-----------------------------------LLFSATMTEEIDELASMSL 94
Query: 328 HHPLFLTTGE---TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 384
P+ + E T KL + + ES + + + AL+ + IVF + +
Sbjct: 95 KKPVKIFINENTDTALKLRQEFIRIRAGRESDRESI-VAALVTRTFQTNTIVFVRTKKDC 153
Query: 385 HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
R+ LL G IK+ + Q R ++L F++G+I VLVS+D +RG+D+EGV
Sbjct: 154 QRMQILLGLLG---IKVGQMQSSLTQGQRIESLSKFKKGEIDVLVSTDLASRGLDIEGVQ 210
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIP 504
V+N + P IK YIHR GRTARAG+ GR +L+ ++E K K+++ + + +
Sbjct: 211 TVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEEERKLLKEIVNSNADRTLKQRLVA 270
Query: 505 SSLIESLR 512
++E+ R
Sbjct: 271 PEVVEAYR 278
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 185/448 (41%), Gaps = 110/448 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P QVA +T+ +D+ +S TG+GKT+S+ LPIV LS A+V+ PTR+
Sbjct: 38 PCQVACIPQTLNG----KDIIGSSETGTGKTMSFVLPIVDKLSVDPCGVF-AIVLTPTRE 92
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q+ D F AI + + V
Sbjct: 93 LAFQIY---------------------------------------DQFKAIGNPMSIRVA 113
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI---NAT 229
+ VG + +EL RP ++VATPGRL D ++
Sbjct: 114 VVVGGLESIRQATELENRP---------------------HVVVATPGRLADLFTIEDSV 152
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
F L + +LV+DE DRLL + + + L T+L + + +
Sbjct: 153 ERFHLHSIRFLVLDEADRLLEDGFASSLSTILDVLPVNRQT------------------- 193
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 349
+V SAT+ +L++ T+ +RY LE +
Sbjct: 194 -------------------LVYSATMNDKMEQLSKTCRSECFIYTSSSSRYSQVRELEQF 234
Query: 350 KLICESKLKPLYLVALL-QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQ 408
L+ ++K YL LL CI+FT S + L L + G + +
Sbjct: 235 YLLIPFQMKTCYLAYLLLYGFPSFSCIIFTGSCKRCQHLFLTLEYLG---LNVGVLHSKM 291
Query: 409 RQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 468
+Q R K + + G I++L+ +D +RG+D+ V VVNY P+ TYIHR GRTARA
Sbjct: 292 KQMERLKAIHNIQRGTIRILICTDVASRGLDIPQVELVVNYHIPSKPSTYIHRVGRTARA 351
Query: 469 GQLGRCFTLLHKDEVKRFKKLLQKADND 496
G G+ +L+ + EV+ F+ + ++ + +
Sbjct: 352 GNRGKAISLVSQFEVEIFRNIERRLERE 379
>gi|425780841|gb|EKV18837.1| DEAD/DEAH box helicase, putative [Penicillium digitatum PHI26]
gi|425783078|gb|EKV20947.1| DEAD/DEAH box helicase, putative [Penicillium digitatum Pd1]
Length = 809
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 162/328 (49%), Gaps = 34/328 (10%)
Query: 14 WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-----WQETIGPGLF 68
W+ +P+ S+ + L LK+ L+ F VQ V + PG
Sbjct: 219 WLANPLRKSVQDTRKFSELGIKSDLLKI-LEQQNYKQAFAVQSTVIPLLLQGDRNHPG-- 275
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
DLCI++ TGSGKTLSY LP+V L R+ LR L+V+PTR+L Q + C+ C
Sbjct: 276 --DLCISAATGSGKTLSYVLPLVTALPPRSASRLRGLIVVPTRELVKQARES-CELCASG 332
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
I ++ + ++ + L + + QV + GL+ G S+ D ISE I
Sbjct: 333 SRLHIGS-AVGNVAIKDEQKLLMRMDQVYNPAIQQQQRDGLN-GNDWMNLSLEDCISEAI 390
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
G +Q + VDIL+ TPGRL+DHI T+GFTL+HL +LV+DE DRL
Sbjct: 391 -------GSNGSLPGHIQRSEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVIDEADRL 443
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L E++Q W+ V+ ++ N TF P K + G+ KP PR K
Sbjct: 444 LNESFQEWVDVVM-----NSLNSREAPETFGPGG----KVLSELGL--SIDAKP-PR--K 489
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTG 336
++LSAT+T+D +KL L L +P + G
Sbjct: 490 VILSATMTRDISKLNSLRLVNPKMVIIG 517
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Query: 374 CIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
++FT S ES RL L++ L ++ + S KTL A+R+G+I V+V++D
Sbjct: 647 VLIFTKSSESASRLARLISLLHPALAKRVGTIIKSNKSSASRKTLTAYRQGRISVIVATD 706
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
+RG+D++ + +V+NYD P I TY+HR GRTARAG+ G ++L+ E + F
Sbjct: 707 RASRGLDLQSLTHVINYDIPTSITTYVHRVGRTARAGRAGSAWSLVAHREGRWF 760
>gi|295670994|ref|XP_002796044.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284177|gb|EEH39743.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 319
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 41/265 (15%)
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 14 IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKV---------- 63
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
LP RR + SAT++ L + L +PL +
Sbjct: 64 -----LPRE-------RRT----------------YLFSATMSSKVESLQRASLSNPLRV 95
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
+ ++Y+ L L K K +YLV LL + I+FT +V T RL LL
Sbjct: 96 SISSSKYQTVSALLQTFLFIPHKYKDIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRA 155
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G I + G QS R L FR +LV++D RG+D+ V+ V+N+D P
Sbjct: 156 LGFGAIPLH---GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPP 212
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLL 478
KTYIHR GRTARAG+ G F+ +
Sbjct: 213 DSKTYIHRVGRTARAGKSGHAFSFV 237
>gi|312067818|ref|XP_003136922.1| Ddx49-A-prov protein [Loa loa]
Length = 478
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 191/437 (43%), Gaps = 114/437 (26%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
++++ +++ PVQV I L D+ + TG+GKTL++ LPI+ L+ +
Sbjct: 58 VRHLAMNTPTPVQV----NCIPHILAGSDVLGCAKTGTGKTLAFGLPILHELAIDPY-GI 112
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
ALV+ PTR+LA+Q+ D FAA
Sbjct: 113 CALVLTPTRELAIQIG---------------------------------------DQFAA 133
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
+ +GL +G+ VG + ++L +RP I+VATPGRL
Sbjct: 134 LGTPIGLKIGIVVGGKDRVAQGNDLARRPH---------------------IVVATPGRL 172
Query: 223 MDHINA---TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
DH+ + G + L +LV+DE DRLL Y L T+L FL
Sbjct: 173 ADHLESDSENTGKLFKKLRFLVLDEADRLLDGQYSIELKTIL---------------NFL 217
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P +L + SAT+T ++L Q+ + P F ++
Sbjct: 218 PKQRQTL-----------------------LFSATITSALSQLHQVSVKKPYFFED-KSE 253
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRLCTLLNHFG 395
++LE ++C +K YLV ++++ E+ ++F+ + L + + G
Sbjct: 254 IATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGLG 313
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
++ Q R+ +L FR G+I++L+ +D +RG+D+ V+ V+N++ P
Sbjct: 314 ---FQVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVINHNVPQNP 370
Query: 456 KTYIHRAGRTARAGQLG 472
KTYIHR GR+ARAG+ G
Sbjct: 371 KTYIHRVGRSARAGRFG 387
>gi|393910350|gb|EFO27145.2| Ddx49-A-prov protein [Loa loa]
Length = 509
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 191/437 (43%), Gaps = 114/437 (26%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
++++ +++ PVQV I L D+ + TG+GKTL++ LPI+ L+ +
Sbjct: 58 VRHLAMNTPTPVQV----NCIPHILAGSDVLGCAKTGTGKTLAFGLPILHELAIDPY-GI 112
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
ALV+ PTR+LA+Q+ D FAA
Sbjct: 113 CALVLTPTRELAIQIG---------------------------------------DQFAA 133
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
+ +GL +G+ VG + ++L +RP I+VATPGRL
Sbjct: 134 LGTPIGLKIGIVVGGKDRVAQGNDLARRPH---------------------IVVATPGRL 172
Query: 223 MDHINA---TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
DH+ + G + L +LV+DE DRLL Y L T+L FL
Sbjct: 173 ADHLESDSENTGKLFKKLRFLVLDEADRLLDGQYSIELKTIL---------------NFL 217
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P +L + SAT+T ++L Q+ + P F ++
Sbjct: 218 PKQRQTL-----------------------LFSATITSALSQLHQVSVKKPYFFED-KSE 253
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRLCTLLNHFG 395
++LE ++C +K YLV ++++ E+ ++F+ + L + + G
Sbjct: 254 IATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGLG 313
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
++ Q R+ +L FR G+I++L+ +D +RG+D+ V+ V+N++ P
Sbjct: 314 ---FQVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVINHNVPQNP 370
Query: 456 KTYIHRAGRTARAGQLG 472
KTYIHR GR+ARAG+ G
Sbjct: 371 KTYIHRVGRSARAGRFG 387
>gi|255957139|ref|XP_002569322.1| Pc21g23550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591033|emb|CAP97252.1| Pc21g23550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 819
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 163/334 (48%), Gaps = 36/334 (10%)
Query: 8 SMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV-----WQET 62
S+P PW+ +P+ S + L + P L L+ F VQ V E
Sbjct: 215 SLP--PWLANPLRKSAQDTKKFSEL-GIKPDLLKILEQQNYKEAFAVQSTVIPLLLQGEQ 271
Query: 63 IGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARC 122
PG DLC+++ TGSGKTLSY LP+V L R LR L+V+PTR+L Q + C
Sbjct: 272 NHPG----DLCVSAATGSGKTLSYVLPLVTALPPRPASRLRGLIVVPTRELVKQARES-C 326
Query: 123 KYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIAD 182
+ C I ++ + ++ + L + + QV + GL G S+ D
Sbjct: 327 ELCASGSRLHIGS-AVGNVAIKDEQKLLMRVDQVYNPAIQQQQRDGLK-GNDWMNLSLED 384
Query: 183 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 242
++E I G +Q + VDIL+ TPGRL+DHI T+GFTL+HL +LV+
Sbjct: 385 CVNEAIDSSGSLPGH-------IQRSEPNVDILICTPGRLVDHIRYTKGFTLKHLEWLVI 437
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL E++Q W+ V+ ++ N TF P K + G+ KP
Sbjct: 438 DEADRLLNESFQEWVDVVM-----NSLNSREAPETFGPGG----KLLSELGL--SIDAKP 486
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
PR K++LSAT+T+D +KL L L +P + G
Sbjct: 487 -PR--KVILSATMTRDISKLNSLRLANPKMVIIG 517
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 365 LLQSLGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREG 423
L+ S + ++FT S ES RL L++ L ++ + S KTL A+R+G
Sbjct: 648 LVPSPSRKTVLIFTKSSESASRLARLISLLHPALAKRVGTIIKSNKSSASRKTLTAYRQG 707
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
+I V+V++D +RG+D+E + +V+NYD P I TY+HR GRTARAG+ G ++L+ E
Sbjct: 708 RISVIVATDRASRGLDLESLTHVINYDIPTSITTYVHRVGRTARAGRAGSAWSLVAHREG 767
Query: 484 KRF 486
+ F
Sbjct: 768 RWF 770
>gi|348535433|ref|XP_003455205.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Oreochromis
niloticus]
Length = 590
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 198/476 (41%), Gaps = 131/476 (27%)
Query: 26 DCPLDHLPC-LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
D D LP L+ ++ L + + + PVQ A I + +D+ + TGSGKTL
Sbjct: 6 DGTWDRLPVKLNEKILQTLDELKFTHMTPVQSAC----IPLFMSNKDVAAEAVTGSGKTL 61
Query: 85 SYALPIVQTLSNRAVRCLR----ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
++ +PI++ L R + + ALV+ PTR+LA+Q I+E
Sbjct: 62 AFVIPIIELLLKREEKLKKMQVGALVITPTRELAVQ---------------------ISE 100
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
+ QF PQ K + L +G S+ A
Sbjct: 101 VMEQF----IEKFPQFKQI-------------LLIGGSNPA------------------- 124
Query: 201 PEDVLQELQSAVDILVATPGRLMDHIN-ATRGFTL----EHLCYLVVDETDRLLREAYQA 255
EDV + +I++ATPGRL D + G L + L LV+DE DRLL ++A
Sbjct: 125 -EDVEKFKDKGANIVIATPGRLEDMFRRKSDGLDLASSVKSLDVLVLDEADRLLDMGFEA 183
Query: 256 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 315
L T+L G L RR G + SAT
Sbjct: 184 SLNTIL----------------------GYLPKQRRTG----------------LFSATQ 205
Query: 316 TQDPNKLAQLDLHHPLFLTTGE-------TRYKLPERLESYKLICESKLKPLYLVALLQS 368
TQ+ KL + L +P+ +T E T K P RL +Y IC ++ K LVA L+
Sbjct: 206 TQELEKLVRAGLRNPVRITVKEKGLAAAATAQKTPSRLSNYYTICRAEDKFNNLVAFLRQ 265
Query: 369 LGEEKCIVFTSSVESTHRLCTLLNHFGEL------RIKIKEYSGLQRQSVRSKTLKAFRE 422
EK +VF S+ C + ++G + ++ I G + R+ FR+
Sbjct: 266 HKHEKLLVFFST-------CACVEYYGRVLEMLVKKVTIHCIHGKMKHK-RNSIFADFRK 317
Query: 423 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
K +LV +D M RG+D+ VN V+ YD P+ ++HR GRTAR G G L
Sbjct: 318 LKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRTARIGNYGDALVFL 373
>gi|302785159|ref|XP_002974351.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
gi|300157949|gb|EFJ24573.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
Length = 523
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 211/477 (44%), Gaps = 112/477 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS- 95
P + A+Q G P+Q+A +I GL +RD+ + TGSGKT ++ +P++ +S
Sbjct: 123 PEILRAVQEAGYKKPTPIQMA----SIPLGLQQRDVIGIAGTGSGKTAAFVIPMLMYVSR 178
Query: 96 ------NRAVRCLRALVVLPTRDLALQVNSAR---CKYCCKNIFGLIADHSIAEMCVQFD 146
RA+ ALV+ PT +LA Q+ KY N+ L+A
Sbjct: 179 LPKMTLERAIEGPYALVMAPTTELAQQIQEETVKLAKYMDINVLSLVA------------ 226
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
G ++G GQSS
Sbjct: 227 ---------------------GEAIG---GQSS--------------------------- 235
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHLC-YLVVDETDRLLREAYQAWLPTVLQLTR 265
+L +I++ATPGRL+ + +G+ + H C Y+V+DE DR++ +
Sbjct: 236 KLLQGCEIVIATPGRLLHCLE--QGYAVLHQCNYVVLDEGDRMIALGF------------ 281
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
E + DA +PS+ ++ + +D+ Y R M SAT+ +LA+
Sbjct: 282 ---EEQVIDALEAMPSS-----NMKPESEDVELEDRIY-RTTYM-FSATMPPAVERLAKK 331
Query: 326 DLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
L +P+ +T E + +R+ ++ + + KP L LL LGE IVF ++ +
Sbjct: 332 YLRNPVVVTIEE----MSKRISQKVMMVDEEEKPKRLRRLLDELGEMSTIVFVNTKKQAD 387
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ L+ G IK+ G + Q R + FR + L+++D + RG+DV V +
Sbjct: 388 KVSKQLHDMG---IKVATIHGGKTQQKRQTNFQDFRSKRRSCLIATDVVGRGIDVPDVGH 444
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQKADNDSCP 499
+VNYD P+ ++ YIHR GRT RAG+ G T L ++ + F K+LL + N P
Sbjct: 445 IVNYDMPSTVEMYIHRIGRTGRAGKSGAATTFLTLNDSEVFYDLKQLLVRTKNPVPP 501
>gi|426197762|gb|EKV47689.1| hypothetical protein AGABI2DRAFT_185614 [Agaricus bisporus var.
bisporus H97]
Length = 433
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 136/287 (47%), Gaps = 44/287 (15%)
Query: 197 ICYDPEDVLQE---LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
I ED +Q+ L I+VATPGRL DH+N+T+GF+L L +LV+DE DRLL +
Sbjct: 99 IVGGEEDRVQQAVRLAKKPHIIVATPGRLHDHLNSTKGFSLRQLKHLVLDEADRLLDLEF 158
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
Q + +L+ + ST+L SA
Sbjct: 159 QLQITEILRAIPRER-------STYL-------------------------------FSA 180
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 373
T+T + KL + L P+ + +YK L Y ++C K + LV L+ S+ +
Sbjct: 181 TMTANVTKLQRASLTDPVRVDVSSFKYKTVSTLLQYYVLCPLVNKEVMLVYLINSMAQNT 240
Query: 374 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 433
IVF +V RL +L L + G QS R F+ GK +LV++D
Sbjct: 241 IIVFVRTVADAKRLSIVLR---TLEFQAVPLHGELSQSQRLGAFNRFKSGKSNILVATDL 297
Query: 434 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 480
+RG+DV V+ V+NYD P K Y+HR GRTARAG+ G+ ++ +
Sbjct: 298 ASRGLDVANVDVVINYDTPTSSKDYVHRVGRTARAGRAGKSILMVSQ 344
>gi|451852848|gb|EMD66142.1| hypothetical protein COCSADRAFT_179496 [Cochliobolus sativus
ND90Pr]
Length = 814
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 198/454 (43%), Gaps = 109/454 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
L ++G + P+Q + + + +D+ + TGSGKT ++ +PI++ L + +
Sbjct: 302 GLASVGFTEPTPIQ----SKAVPIAMQGKDVVGGAETGSGKTAAFLIPILERLLYRQKKI 357
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R + +PTR+LA+Q C N+ A F + F
Sbjct: 358 PTTRVAIFMPTRELAVQ---------CFNV---------ATKLASFTDITF--------- 390
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
L G S ++ + L RP D+++ATP
Sbjct: 391 ------------ALMAGGFSSREQEAVLKTRP---------------------DVVIATP 417
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR +DH++ T F +E+L LV+DE DR+L E +++ L +L T +
Sbjct: 418 GRFIDHMHNTAAFQVENLEILVLDEADRMLEEGFESQLNEIL---------------TTI 462
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
P S +T M+ SAT+T +KL ++ + P+ L +
Sbjct: 463 PK---SRQT--------------------MLFSATMTSSVDKLIRIGMDKPVRLMVDAKK 499
Query: 340 YKLPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
+ + + + + K YL+ + + + EK IVF + HR+ + G
Sbjct: 500 QTVKGLTQEFVRLRQGKEDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCG-- 557
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R + ++AFR GK L+++D +RG+D++ V+ V+NY+ P +
Sbjct: 558 -LKASELHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVSTVINYEAPQTHEI 616
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
Y+HR GRTARAG+ GR TL + + K K+ ++
Sbjct: 617 YLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVK 650
>gi|3775997|emb|CAA09201.1| RNA helicase [Arabidopsis thaliana]
Length = 376
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 153/332 (46%), Gaps = 63/332 (18%)
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+ + F A+ + L + VG + L KRP +
Sbjct: 24 QIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH---------------------V 62
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGRL DH++ T+GF+L+ L YLV+DE DRLL E ++ L +L+
Sbjct: 63 IVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE------------ 110
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+ P R + SAT+T+ KL + L +P+ +
Sbjct: 111 -------------------------EIPLERKT-FLFSATMTKKVRKLQRACLRNPVKIE 144
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
++Y + L+ +K K YLV +L + E ++FT + + T L +L
Sbjct: 145 AA-SKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSL 203
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I I SG QS R L F+ G+ +LV +D +RG+D+ V+ V+NYD P
Sbjct: 204 GFRAIPI---SGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTN 260
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
K YIHR GRTARAG+ G +L+++ E++ +
Sbjct: 261 SKDYIHRVGRTARAGRSGVGISLVNQYELEWY 292
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 194/440 (44%), Gaps = 103/440 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ + + Q+++ L ++D+ + TGSGKTL++ LPI+Q L + AL++ PTR
Sbjct: 32 YKIPTPIQQQSLPYTLQKKDIIGLAETGSGKTLAFGLPILQHLLANP-QPYYALILSPTR 90
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
E+CVQ +++ F AI ++ L
Sbjct: 91 ----------------------------ELCVQ-----------IQEHFQAIGASIALKS 111
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ +G + L ++P I++ TPG+++ H+ T+G
Sbjct: 112 VVILGGMDPLAQAKALAQKPH---------------------IIIGTPGKILYHLENTKG 150
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
F L+ L +LV+DE D+LL ++ + +L + + +T+L
Sbjct: 151 FNLKQLKFLVLDEADKLLNMDFEREINAILDIIPKER-------NTYL------------ 191
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
SAT+T +KL + L P+ + ++Y+ L+ L
Sbjct: 192 -------------------FSATMTNKVSKLQRASLKDPVKIEVS-SKYQTVSTLQQNYL 231
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K YLV LL L IVF ++ + ++ LL + G I I G Q+
Sbjct: 232 FVPDKYKETYLVYLLNELAGLTSIVFVATCQMAIKITLLLRNLGFQAIAI---HGQMSQA 288
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R + F+ + +L+++D +RG+D+ V+ V+N+D P K Y+HR GRTARAG+
Sbjct: 289 KRLSSFNKFKSKESNLLIATDVASRGLDIPFVDLVLNFDIPQNAKEYVHRVGRTARAGKS 348
Query: 472 GRCFTLLHKDEVKRFKKLLQ 491
G+ +L+ + +V+ ++K+ Q
Sbjct: 349 GKAISLVTQYDVEMYQKIEQ 368
>gi|167384217|ref|XP_001736854.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165900561|gb|EDR26857.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 188/440 (42%), Gaps = 112/440 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 112
+ + +I L ++D+ + TGSGKT S+ LP++Q L NRA C+ ++ PTR+
Sbjct: 35 IQENSIPVALQKKDIIGIAQTGSGKTASFLLPMIQHLLNVKEKNRAFYCI---IIEPTRE 91
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GLSV 171
LA QV +V I A+ GL
Sbjct: 92 LA---------------------------------------AQVVEVLDEIGKALPGLMS 112
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
L VG + + +L KRP ++V TPGR++ HI T+G
Sbjct: 113 CLLVGGMDVMKQSVQLAKRP---------------------HVIVGTPGRIVYHIKNTKG 151
Query: 232 F--TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
+++ + +LV+DE D+LL E F++ +L S +T
Sbjct: 152 VEESIQKVKFLVIDEADKLL-------------------EMDFANEIDYLIEKLPSQRTT 192
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 349
M+ SAT++ KL + L HP+ + E +Y+ + L
Sbjct: 193 -------------------MLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQE 233
Query: 350 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 409
K + YL+++L+ + I+FT +L +L G I + G
Sbjct: 234 YCFIPFKYRDGYLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPL---HGKMS 290
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
Q R L+ F+ GK +LV++D +RG+D+ V+ V+NYD P K YIHR GRTARAG
Sbjct: 291 QQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAG 350
Query: 470 QLGRCFTLLHKDEVKRFKKL 489
+ G TL+ + ++ ++++
Sbjct: 351 KSGYAITLVTQYSIELYQRI 370
>gi|67477952|ref|XP_654408.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56471449|gb|EAL49018.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703981|gb|EMD44318.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba histolytica
KU27]
Length = 432
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 191/449 (42%), Gaps = 113/449 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 112
+ + +I L ++D+ + TGSGKT S+ LP+VQ L NR C+ ++ PTR+
Sbjct: 35 IQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQHLLNVKEKNRGFYCI---IIEPTRE 91
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV +V D P GL+
Sbjct: 92 LAAQV------------------------------------VEVIDEMGKALP--GLTSC 113
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L VG + + +L KRP+ ++V TPGR++ HI T+G
Sbjct: 114 LLVGGMDVMKQSVQLAKRPQ---------------------VIVGTPGRIVYHIKNTKGV 152
Query: 233 --TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
++E + +LV+DE D+LL E F++ +L +T
Sbjct: 153 EESIEKVKFLVIDEADKLL-------------------EMDFANEIDYLIEKLPKQRTT- 192
Query: 291 RCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYK 350
M+ SAT++ KL + L HP+ + E +Y+ + L
Sbjct: 193 ------------------MLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEY 234
Query: 351 LICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 410
K + YL+++L+ + I+FT +L +L G I + G Q
Sbjct: 235 CFIPFKYRDGYLISILKETEGKTIIIFTMKCSGCTKLVMMLRQMGYAAIPL---HGKMSQ 291
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
R L+ F+ GK +LV++D +RG+D+ V+ V+NYD P K Y+HR GRTARAG+
Sbjct: 292 QKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYVHRVGRTARAGK 351
Query: 471 LGRCFTLLHKDEV---KRFKKLLQKADND 496
G TL+ + + +R + +++K N+
Sbjct: 352 SGYAITLVTQYSIELYQRIETMIEKKLNE 380
>gi|302818333|ref|XP_002990840.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
gi|300141401|gb|EFJ08113.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
Length = 583
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 211/477 (44%), Gaps = 112/477 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS- 95
P + A+Q G P+Q+A +I GL +RD+ + TGSGKT ++ +P++ +S
Sbjct: 194 PEILRAVQEAGYKKPTPIQMA----SIPLGLQQRDVIGIAGTGSGKTAAFVIPMLMYVSR 249
Query: 96 ------NRAVRCLRALVVLPTRDLALQVNSAR---CKYCCKNIFGLIADHSIAEMCVQFD 146
RA+ ALV+ PT +LA Q+ KY N+ L+A
Sbjct: 250 LPKMTLERAIEGPYALVMAPTTELAQQIQEETVKLAKYMDINVLSLVA------------ 297
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
G ++G GQSS
Sbjct: 298 ---------------------GEAIG---GQSS--------------------------- 306
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHLC-YLVVDETDRLLREAYQAWLPTVLQLTR 265
+L +I++ATPGRL+ + +G+ + H C Y+V+DE DR++ +
Sbjct: 307 KLLQGCEIVIATPGRLLHCLE--QGYAVLHQCNYVVLDEGDRMIALGF------------ 352
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
E + DA +PS+ ++ + +D+ Y R M SAT+ +LA+
Sbjct: 353 ---EEQVIDALEAMPSS-----NMKPESEDVELEDRIY-RTTYM-FSATMPPAVERLAKK 402
Query: 326 DLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
L +P+ +T E + +R+ ++ + + KP L LL LGE IVF ++ +
Sbjct: 403 YLRNPVVVTIEE----MSKRISQKVIMVDEEEKPKRLRRLLDELGEMSTIVFVNTKKQAD 458
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ L+ G IK+ G + Q R + FR + L+++D + RG+DV V +
Sbjct: 459 KVSKQLHDMG---IKVATIHGGKTQQKRQTNFQDFRSKRRSCLIATDVVGRGIDVPDVGH 515
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQKADNDSCP 499
+VNYD P+ ++ YIHR GRT RAG+ G T L ++ + F K+LL + N P
Sbjct: 516 IVNYDMPSTVEMYIHRIGRTGRAGKSGAATTFLTLNDSEVFYDLKQLLVRTKNPVPP 572
>gi|325179957|emb|CCA14359.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 843
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 197/460 (42%), Gaps = 116/460 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAVRCLRALVVLPTRDLAL 115
+ + I L +D+C ++ TGSGKT ++ LPI++ L R + R +++ P R+LA
Sbjct: 242 IQEYAIPMALLGKDICASAQTGSGKTAAFLLPILERLQLRTRRIAATRVIIICPVRELAT 301
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q S + I L + D+ +A L V
Sbjct: 302 QCQS-----------------------------VLIKLARFTDITSA----------LVV 322
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G G+ +++ EL++ DI+V TPGR++DH+ + L+
Sbjct: 323 G-------------------GLPLKAQEL--ELRTCPDIIVCTPGRMIDHLRNSPSVHLD 361
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L LV+DE DRLL + + + +R C
Sbjct: 362 SLEILVLDEADRLLELGFTEEIQEI----------------------------VRMC--- 390
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL-ESYKLICE 354
P R M+ SAT+T ++L L + P+ + + Y + + L + + I
Sbjct: 391 ------PRARQT-MLFSATMTSKIDQLIALSMKRPVRIC-ADPLYDMSKHLVQEFVRIRP 442
Query: 355 SKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
++ + L+AL +K IVF + HR+ L FG IK E G Q
Sbjct: 443 NREADRDAILLALCTRAFTQKTIVFMETKVHAHRMMIL---FGLSGIKAAELHGNLTQQE 499
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L+ FR+G + +L+ +D RG+DV+GV V+NY+ P I TY+HR GRTARAGQ+G
Sbjct: 500 RLDALEKFRQGAVDILLCTDVAARGIDVKGVRAVINYEMPKDITTYVHRVGRTARAGQVG 559
Query: 473 RCFTLLHKDEVKRFKKLLQKADNDSC----PIHSIPSSLI 508
R TL +++L+ K C ++P S+I
Sbjct: 560 RAVTL-----TSEYRRLIMKQVTRHCHGFAKSRAVPDSVI 594
>gi|307214659|gb|EFN89598.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 377
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 164/337 (48%), Gaps = 63/337 (18%)
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+ + F A+ ++G+ + VG ++ + L K+P I
Sbjct: 26 QISEQFEALGSSIGVKCAVLVGGMDMSAQALLLSKKP---------------------HI 64
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ TPGRL+D++ T+GF+L++L +LV+ E DR+L ++ + +L++
Sbjct: 65 IITTPGRLVDYLENTKGFSLQNLKFLVMGEADRILNMDFEIEVDKILRV----------- 113
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 114 ----IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKVE 146
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
T+Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL +
Sbjct: 147 VS-TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNL 205
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G Q+ R L F+ +L+S+D +RG+D+ V+ V+N+D P +
Sbjct: 206 GFTAVPL---HGQMSQNKRIAALTKFKARNRSILISTDVASRGLDIPHVDIVINFDIPTH 262
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
K YIHR GRTARAG+ GR T + + +V+ ++++ Q
Sbjct: 263 SKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRIEQ 299
>gi|115400041|ref|XP_001215609.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
gi|114191275|gb|EAU32975.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
Length = 360
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 132/271 (48%), Gaps = 43/271 (15%)
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L+L
Sbjct: 64 VIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRL---------- 113
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
LP K K Y + SAT++ L + L P+ +
Sbjct: 114 -----LP------------------KRKTY------LFSATMSSKVESLQRASLSDPVRV 144
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
+ + L+SY L K K YLV LL + I+FT +V T RL +L +
Sbjct: 145 SVSTKNQTASKLLQSY-LFIPHKFKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRN 203
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G I I G QS R +L FR +L+++D RG+D+ V+ V+NYD P
Sbjct: 204 LGFPAIPI---HGQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQ 260
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
KTYIHR GRTARAG+ G F+ + + EV+
Sbjct: 261 DSKTYIHRVGRTARAGKSGIAFSFVTQYEVE 291
>gi|449684384|ref|XP_002156411.2| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Hydra magnipapillata]
Length = 544
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 197/459 (42%), Gaps = 106/459 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ +G F + TI L +DLC + TGSGKT ++ LPI++ L
Sbjct: 6 PLLK-AINELG----FEHPTKIQSSTIPIALLGKDLCACATTGSGKTAAFMLPILERLLF 60
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ + ++L + CKN CV V
Sbjct: 61 KPKQTAXTKILLV--------------FICKN------------FCVX-----------V 83
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
V ++A + +GLA G + + L K P D+++
Sbjct: 84 YSVSESLAKFSNIQLGLATGGLDSRSQEAILRKNP---------------------DVVI 122
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH++ T F L+ + LV+DE DR+L E + + +
Sbjct: 123 ATPGRLIDHLHNTPSFNLQTIEILVLDEADRMLEEHFHDQMKEI---------------- 166
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
IR C P R M+ SAT+T + N L L L++P+ L
Sbjct: 167 ------------IRLC---------PRGRQT-MLFSATMTDEVNALMSLSLNNPVKLFVD 204
Query: 337 ETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+ + + I ++ + +VAL ++ +VF + H+L + F
Sbjct: 205 QNTDVASSLHQEFVRIRSTREADRLAVVVALCCRSFNQQTLVFLQTKVLAHKLRIIFGLF 264
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G +K E G Q R + L+ F+ ++ +LV++D RG+D+ GV V++++ P
Sbjct: 265 G---LKAAELHGNLTQLQRLEALEKFKNNEVDILVATDLAARGLDIVGVKTVISFNMPTT 321
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
IK+YIHR GRTARAG+ GR TL+ + E K K++++ A
Sbjct: 322 IKSYIHRVGRTARAGKAGRSITLVGEKERKMLKEVVKNA 360
>gi|167375363|ref|XP_001733609.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165905196|gb|EDR30262.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 188/440 (42%), Gaps = 112/440 (25%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRD 112
+ + +I L ++D+ + TGSGKT S+ LP++Q L NRA C+ ++ PTR+
Sbjct: 35 IQENSIPVALQKKDIIGIAQTGSGKTASFLLPMIQHLLNVKEKNRAFYCI---IIEPTRE 91
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GLSV 171
LA QV +V I A+ GL
Sbjct: 92 LA---------------------------------------AQVVEVLDEIGKALPGLMS 112
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
L VG + + +L KRP ++V TPGR++ HI T+G
Sbjct: 113 CLLVGGMDVMKQSIQLAKRP---------------------HVIVGTPGRIVYHIKNTKG 151
Query: 232 F--TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
+++ + +LV+DE D+LL E F++ +L S +T
Sbjct: 152 VEESIQKVKFLVIDEADKLL-------------------EMDFANEIDYLIEKLPSQRTT 192
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESY 349
M+ SAT++ KL + L HP+ + E +Y+ + L
Sbjct: 193 -------------------MLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQE 233
Query: 350 KLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR 409
K + YL+++L+ + I+FT +L +L G I + G
Sbjct: 234 YCFIPFKYRDGYLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPL---HGKMS 290
Query: 410 QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
Q R L+ F+ GK +LV++D +RG+D+ V+ V+NYD P K YIHR GRTARAG
Sbjct: 291 QQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAG 350
Query: 470 QLGRCFTLLHKDEVKRFKKL 489
+ G TL+ + ++ ++++
Sbjct: 351 KSGYAITLVTQYSIELYQRI 370
>gi|331215191|ref|XP_003320276.1| hypothetical protein PGTG_01188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299266|gb|EFP75857.1| hypothetical protein PGTG_01188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 874
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 239/532 (44%), Gaps = 96/532 (18%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL---- 94
+K AL N+ + VQ A ++ RDL + + TGSGKTL+YALPI+ L
Sbjct: 245 IKRALYNLSFTKPTAVQEASLPISLSSSDSPRDLVVIAETGSGKTLAYALPILNALILSP 304
Query: 95 ------SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSL 148
S+ + + LV+ PTR+L LQV + D + MC + S
Sbjct: 305 PSPMLKSSPQILPIVTLVLTPTRELCLQVKAH-------------IDTFLKAMCSETQSS 351
Query: 149 L---FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVL 205
+ P I V + G+A+ + E S+ + P C
Sbjct: 352 QEEGATNEPSSSKNRTGIT-TVSICGGIAIAKQRKQLERSKKLMEPGKGGLGC------- 403
Query: 206 QELQSAVDILVATPGRLMDHINATRGFT---LEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
I++ATPGRL D I + F L +L++DE D+++ + + L +L+
Sbjct: 404 --------IVIATPGRLWDMIQSWDEFAEGIKRKLDWLIIDEADKMIEKGHFEELEKILK 455
Query: 263 LTR----------SDNEN-----------------RFSDASTFLPSAFGSL-------KT 288
LT+ +DN N + +DA ++ ++ K
Sbjct: 456 LTKRPKDRRPRHTTDNNNADEDDGEEEEWEDEWTSQANDADNYIKEKIRTMVFSATMDKN 515
Query: 289 IRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP---LFLTTGETRYKLPER 345
++ +R FK KP P + + A D L Q+D P L T + R +
Sbjct: 516 LQINLKKRSFKGKP-PAVGGSIPPADPMHD--LLEQIDFRDPHPELIDLTPQGR--MVGG 570
Query: 346 LESYKLICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
L+ K+ C K K LYL+ +L+ G + IVF SS+ + RL +LN + +
Sbjct: 571 LKECKIECVLKDKDLYLLHFMLRYTG--RTIVFLSSISALRRLSPMLNLLLPDSTVLTLH 628
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
S +Q++S R K+L FR +L+S+D RG+D+ V++V++Y P Y+HR+GR
Sbjct: 629 SEMQQRS-RLKSLDRFRSSSNSILLSTDVAARGLDIPQVDHVIHYQVPRSSDCYVHRSGR 687
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQ---KADN-DSCPI-HSIPSSLIESL 511
TARAG+ G L+ DE+K ++ L++ +AD+ S PI HSI + L E L
Sbjct: 688 TARAGKGGVALALIAPDELKTWRSLMKNLGRADDLPSPPIEHSISNKLKELL 739
>gi|115397383|ref|XP_001214283.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192474|gb|EAU34174.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 853
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 171/351 (48%), Gaps = 50/351 (14%)
Query: 2 EEAKKKSMPVLP-WM----RSPVDV-SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQ 55
E+ +K + LP W+ R+P D + F D ++H L L+N G F VQ
Sbjct: 214 EQQEKPTYSSLPSWLANPFRTPADERTKFADLGIEH------DLLKNLENNGYKEAFAVQ 267
Query: 56 VAVWQETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
AV + GP DLCI++ TGSGKTLSY LP+V L +R L+V+PTR+L
Sbjct: 268 SAVIPLLLKGPRNHPGDLCISAATGSGKTLSYVLPLVTALEQAPAPRMRGLIVVPTRELV 327
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
Q A C+ C GL ++ + ++ + + + QV G +
Sbjct: 328 KQAREA-CELCAAG-SGLRVASAVGNVAIKDEQRSLMRVDQV----------YGPEISRQ 375
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVL----QELQSAVDILVATPGRLMDHINATR 230
+ + D+ + A + D D L + + VDIL+ TPGRL+DHI T+
Sbjct: 376 RQHTKMTDQDWTNFNLQEYVADVA-DRGDCLPGYVHKAEPNVDILICTPGRLVDHIRYTK 434
Query: 231 GFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL--TRSDNENRFSDASTFLPSAFGSLKT 288
GFTL+HL +LV+DE DRLL E++Q W+ V+ +R D++ AFGS
Sbjct: 435 GFTLKHLEWLVIDEADRLLNESFQEWVDVVMTSLDSRKDSD------------AFGSSGQ 482
Query: 289 I-RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
I G+ K+ PR K++LSAT+T+D KL L L +P + G +
Sbjct: 483 IMADLGLPIQTKE---PR--KVILSATMTRDVTKLNSLRLLNPKLVLVGSS 528
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R GKI +++++D +RG+D+ +N+VVNYD P + TY+HR GRTAR
Sbjct: 716 NKSSASRKTLTAYRRGKISIIIATDRASRGLDLPSLNHVVNYDVPPSVTTYVHRVGRTAR 775
Query: 468 AGQLGRCFTLLHKDEVKRFKK 488
AG+ G +TL+ E + F K
Sbjct: 776 AGREGSAWTLVAHREGRWFVK 796
>gi|302833349|ref|XP_002948238.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
gi|300266458|gb|EFJ50645.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
Length = 836
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 213/474 (44%), Gaps = 109/474 (22%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
F L P LK A++ +G + P+Q A I L RD+C ++ TGSGKT
Sbjct: 171 FSSSSFADLNLSRPLLK-AVEALGYKTPTPIQAAC----IPLALAGRDICGSAVTGSGKT 225
Query: 84 LSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
++ALP ++ L +R R L A LV+ PTR+LA+Q+ HS+ E
Sbjct: 226 AAFALPFLERLLHRP-RGLAATYVLVLTPTRELAVQI------------------HSMIE 266
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
QF + +V L VG S++ + + L K P
Sbjct: 267 KLAQFTDV---------------------TVALIVGGLSLSVQAATLRKLP--------- 296
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
+++VATPGRL+DH+ ++ LE L LV+DE DRLL ++ V
Sbjct: 297 ------------EVVVATPGRLIDHLRNSQSVGLEDLAVLVLDEADRLLEMGFR---DEV 341
Query: 261 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 320
+++ R + R T L SA F D+ V+ ++S +L Q
Sbjct: 342 MEVVRCAPKKR----QTMLFSAT--------------FSDQ-----VRDLVSLSLKQPVR 378
Query: 321 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL-QSLGEEKCIVFTS 379
A P LT R K P + + +C VAL +S + IVF S
Sbjct: 379 LAADAARAAPKLLTQEIVRLKGPAAAATKEAVC---------VALCSRSFSSGRTIVFCS 429
Query: 380 SVESTHRLCTLLNHFGELRI-KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGM 438
+ + HRL L FG ++ E G Q+ R ++L++FR G L+++D RG+
Sbjct: 430 TKQRAHRLKIL---FGLAKLPPAAELHGNMSQTARLESLESFRRGDTAYLLATDVAARGL 486
Query: 439 DVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
D++GV VVNYD P ++TY+HR GRTARAG G TL+ + K+L ++
Sbjct: 487 DIQGVEVVVNYDAPRKLETYLHRIGRTARAGAAGVAVTLVEDGDRPLLKELTRR 540
>gi|422294697|gb|EKU21997.1| ATP-dependent RNA helicase DDX23/PRP28 [Nannochloropsis gaditana
CCMP526]
Length = 820
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 201/468 (42%), Gaps = 108/468 (23%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT-LSNR 97
L+ ++ MG P+Q A I G+ RD+ + TGSGKT ++A+P++ L+
Sbjct: 397 LRKTVEGMGWKEPSPIQRAA----IPVGMGRRDIIGIAETGSGKTGAFAIPMINYCLTLP 452
Query: 98 AVRCLR-------ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF 150
A R ALV+ PTR+LA
Sbjct: 453 AEHRTRTPEEGPLALVMAPTRELA------------------------------------ 476
Query: 151 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 210
Q++ A + GL VG I ED L+
Sbjct: 477 ---EQIEAQVAILIEGTGLKSCSGVGGKPI---------------------EDQAFALRE 512
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ----AWLPTVLQLTRS 266
VDIL+ TPGRL D I+ +R L Y+V+DE DR++ ++ A L T+ L +S
Sbjct: 513 GVDILIGTPGRLKDLID-SRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDTMGGLLKS 571
Query: 267 DNE---NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 323
+NE +R +DA+ K + R+ M SAT+ ++A
Sbjct: 572 ENEEEADRQADAAQ---------------------KGEQLYRVTAM-FSATMPPAVERIA 609
Query: 324 QLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQS-LGEEKCIVFTSSVE 382
+ L P + GE +R+E + K +V LL S E+K IVF ++
Sbjct: 610 RSYLRAPATIKIGEANSGKNKRIEQRLIFTTEPGKRKAVVDLLTSPKKEDKFIVFVNA-- 667
Query: 383 STHRLCTLL-NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
R C +L H + RI G + Q R +L+AFR G VLV++D RG+D+
Sbjct: 668 --KRACDVLARHLEQTRISCGILHGGKSQDQREASLEAFRNGVFTVLVATDVAARGLDIP 725
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
V++V+NYD PA I+ Y HR GRT RAG+ G TLL +++ + F L
Sbjct: 726 DVSHVINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDL 773
>gi|170744521|ref|YP_001773176.1| DEAD/DEAH box helicase [Methylobacterium sp. 4-46]
gi|168198795|gb|ACA20742.1| DEAD/DEAH box helicase domain protein [Methylobacterium sp. 4-46]
Length = 499
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 201/478 (42%), Gaps = 116/478 (24%)
Query: 42 ALQNMGISSLFPVQV-AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV- 99
AL G + P+Q AV Q G RDLC + TG+GKT ++ALPI+ L++
Sbjct: 16 ALAETGYVTPTPIQAQAVPQAMAG-----RDLCGIAQTGTGKTAAFALPILHRLASETPQ 70
Query: 100 -----RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV+ PTR+LA Q IAE + L S
Sbjct: 71 RRAPRRGCRVLVLSPTRELASQ---------------------IAESFGDYGKFLPFS-- 107
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
VF G+ +G+ A L + VDI
Sbjct: 108 -TTVVFG----------GVTIGRQERA--------------------------LANGVDI 130
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
LVATPGRL+D I+ R +L+ + YLV+DE D++L + L ++
Sbjct: 131 LVATPGRLLDLID-RRSLSLDAVEYLVLDEADQMLDLGFIHALKRIV------------- 176
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T LP A SL F PR + L+A +DP ++A P+ T
Sbjct: 177 --TLLPKARQSL-----------FFSATMPRNI-ATLAAQYLRDPVQVAVT----PVATT 218
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
ER+E + + K L +L+ ++ +VFT + R+ L
Sbjct: 219 A--------ERVEQRVVHVPTGAKQALLATILRDASIDRVLVFTRTKHGADRVVRGLEKA 270
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I G + Q R + L AFR G +VLV++D RG+DVEGV++VVN+D P
Sbjct: 271 G---IGSAAIHGNKSQPQRERALAAFRAGICRVLVATDIAARGIDVEGVSHVVNFDLPNV 327
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
+ Y+HR GRTARAG G + + DE + + + +++ P +IP + R
Sbjct: 328 PEAYVHRIGRTARAGADGLAISFCN-DEERAYLRDIERLTRQKVPEMAIPEGFVPPSR 384
>gi|205375157|ref|ZP_03227948.1| DEAD-box ATP dependent DNA helicase [Bacillus coahuilensis m4-4]
Length = 398
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 192/439 (43%), Gaps = 111/439 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVR 100
AL+ GI+ P+Q V P + E RD+ + TGSGKTL++ LP+++ + +
Sbjct: 16 ALEQQGITEPTPIQTEVI-----PLMVEGRDVIAQAKTGSGKTLAFILPMLEKVDLEKI- 69
Query: 101 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 160
++ L+V PTR+LA+QV + L+ + P+V +V
Sbjct: 70 AVQGLIVAPTRELAIQVTD------------------------ELKKLVELEFPEV-NVL 104
Query: 161 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS-AVDILVATP 219
A GQ D E L +L++ + I+VATP
Sbjct: 105 AVYG-----------GQ----------------------DVEKQLHKLETRNIHIVVATP 131
Query: 220 GRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
GRL+DH+ RG L L L++DE D++L + +LP V Q+ + R +
Sbjct: 132 GRLLDHMR--RGTIDLSELDMLILDEADQML---HIGFLPEVEQIIEATPPTRQT----- 181
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
+ SAT+++D LA+ P + +
Sbjct: 182 ------------------------------ALFSATISKDVRTLAKRYQQQP-YTVQVKD 210
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+ +L E +E + + + K LV +++ I+F ++ +L L G L
Sbjct: 211 KERLVEEIEQFVVETTDRKKLQALVEVIKETQPFMGIIFCRTIRRVSKLHMELKAKGFL- 269
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ E G Q+ R +K FR+ KIQ+L+++D RG+DVEGV +V NYD P +++Y
Sbjct: 270 --VDELHGDLSQAKRENVMKRFRDAKIQLLIATDVAARGLDVEGVTHVYNYDIPQDVESY 327
Query: 459 IHRAGRTARAGQLGRCFTL 477
IHR GRT RAG+ G T
Sbjct: 328 IHRIGRTGRAGETGMAITF 346
>gi|407792739|ref|ZP_11139775.1| ATP-dependent RNA helicase, partial [Idiomarina xiamenensis 10-D-4]
gi|407216997|gb|EKE86833.1| ATP-dependent RNA helicase, partial [Idiomarina xiamenensis 10-D-4]
Length = 393
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 192/458 (41%), Gaps = 114/458 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P + AL G + P+Q + I L +D+ + TG+GKT + LPI++ L +
Sbjct: 10 PNILDALARQGYTEPTPIQA----QAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEMLKD 65
Query: 97 --RA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
RA R L++ PTR+LA
Sbjct: 66 GPRAQANTARVLILTPTRELA--------------------------------------- 86
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV + A + L+ + G G+ +P+ + +L+ VD
Sbjct: 87 AQVGESVATYGANLALNYAVVFG-------------------GVKINPQ--MMKLRKGVD 125
Query: 214 ILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
ILVATPGRL+D NA R LE LV+DE DR+L + + +++L
Sbjct: 126 ILVATPGRLLDLYQQNAIRFPKLE---VLVLDEADRMLDMGFIHDIKKIIKL-------- 174
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
LP+ +L + SAT + D LA+ ++ P
Sbjct: 175 -------LPNQRQTL-----------------------MFSATFSNDIRALAKGLVNDPA 204
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
++ ER+E E KP L+ +L+ L + IVF+ + +RL L
Sbjct: 205 EISVAPAN-STAERIEQILYAAEKSQKPRMLMQILRELNLPQVIVFSRTKHGANRLVKQL 263
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
+ G L I G + Q R+K L F+ G++QVLV++D RG+D+E + V+NYD
Sbjct: 264 HSDGFLAAAI---HGNKSQGARTKALADFKSGQVQVLVATDIAARGLDIEKLPYVINYDL 320
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
P + Y+HR GRT RAGQ G +L+ +E K K +
Sbjct: 321 PQVAEDYVHRIGRTGRAGQTGHAISLVMDEEFKTLKAI 358
>gi|195149497|ref|XP_002015694.1| GL11206 [Drosophila persimilis]
gi|194109541|gb|EDW31584.1| GL11206 [Drosophila persimilis]
Length = 785
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 204/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF V++ + L G L I+ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVF---VQTKKQAHRLHILLGLLGIRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|378728301|gb|EHY54760.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 813
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 190/436 (43%), Gaps = 105/436 (24%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
D+ ++ TGSGKT ++ LPI++ L R V R +++PTR+LA+Q C N
Sbjct: 325 DVVGSAVTGSGKTAAFLLPILERLLYRPRKVPTTRVAILMPTRELAVQ---------CYN 375
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
+ A +F + F + VG + ++ + L
Sbjct: 376 V---------ATALARFTDITFAQV---------------------VGGFPLREQEAILK 405
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
KRP D+++ATPGR +DH+ + F +E++ LV+DE DR+
Sbjct: 406 KRP---------------------DVVIATPGRFIDHMRNSASFVVENIEILVLDEADRM 444
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L ++ L +L KTI P R
Sbjct: 445 LETGFEDELNEIL-------------------------KTI------------PKGRQT- 466
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI--CESKLKPLYLVALL 366
M+ SAT+T +KL ++ ++ P+ L+ + + ++ + + L+ L L
Sbjct: 467 MLFSATMTDSVDKLVRVGMNRPVRLSVDAKKSTVSGLVQEFVRLRPGRENLRLATLCVLC 526
Query: 367 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 426
++ E+ I+F + HR+ + FG L +K E G Q R + AFREGK
Sbjct: 527 KNFFTERTIIFFRQKKEAHRVRIV---FGLLGLKAGELHGSMSQEQRISAVNAFREGKTT 583
Query: 427 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
L+++D +RG+D++ V VVNY+ P + Y+HR GRTARAG+ GR T+ + + K
Sbjct: 584 HLLATDLASRGLDIKNVMTVVNYEAPQTHEIYLHRVGRTARAGRSGRACTIAAEPDRKVV 643
Query: 487 KKLLQKADNDSCPIHS 502
+ ++ A + S
Sbjct: 644 RAAVKSARQQGAKVVS 659
>gi|198456267|ref|XP_001360280.2| GA15282 [Drosophila pseudoobscura pseudoobscura]
gi|198135552|gb|EAL24855.2| GA15282 [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 204/468 (43%), Gaps = 117/468 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-----SNRAVRCLRALVV 107
P+Q + TI L RD+C + TG+GKT +Y LP ++ L +N+A+ R LV+
Sbjct: 182 PIQAS----TIPIALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVL 235
Query: 108 LPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV 167
+PTR+L QV + + + QF S+
Sbjct: 236 VPTRELGAQV------------------YQVTKQLCQFTSI------------------- 258
Query: 168 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 227
VGLA+G + + + L + P DI++ATPGRL+DHI
Sbjct: 259 --DVGLAIGGLDVKAQEAVLRQNP---------------------DIVIATPGRLIDHIK 295
Query: 228 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLK 287
T FTL+ + L++DE DR+L E + + +
Sbjct: 296 NTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI--------------------------- 328
Query: 288 TIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGE-TRYKLPE 344
I C R M+ SAT+++ LA + L P+ F+ + + L +
Sbjct: 329 -INSCCKTRQT----------MLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQ 377
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
+ E +P+ L +L+ + C+VF V++ + L G L I+ E
Sbjct: 378 EFIRIREDKEGDREPI-LASLICRTFHDHCMVF---VQTKKQAHRLHILLGLLGIRAGEL 433
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q R ++LK F+E +I VL+++D RG+D+ GV V+N+ P + YIHR GR
Sbjct: 434 HGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGR 493
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
TARAG+ G +L + E K K +++ A++ + IP +IE R
Sbjct: 494 TARAGRAGISVSLAGEKERKIVKDIIKNAES-TIKNRIIPPEIIEKYR 540
>gi|427792819|gb|JAA61861.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 696
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 211/474 (44%), Gaps = 112/474 (23%)
Query: 25 EDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTL 84
E+ + P LK AL M P+Q + TI L RD+ + TG+GKT
Sbjct: 123 ENTSFQQMNLSRPLLK-ALTAMNFVYPTPIQSS----TIPMALLGRDIYACAATGTGKTA 177
Query: 85 SYALPIVQTLSNRAVR--CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
++ LP+++ L R + R LV++PTR+LA+QV + ++
Sbjct: 178 AFMLPVLERLLFRPKQDVVTRVLVIVPTRELAVQV------------------YQVSLQL 219
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
QF +++ + L+ G + + + L K P
Sbjct: 220 AQFTNIM---------------------ITLSAGGLDLKAQEAALRKLP----------- 247
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
DI++ATPGRL+DH+ T GF L ++ L++DE D++L E + + + +
Sbjct: 248 ----------DIIIATPGRLIDHLENTPGFDLRNIEVLILDEADKMLDETFASQMKEI-- 295
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
IR+C P M+ SAT+T++ L
Sbjct: 296 --------------------------IRQCA----------PTRQTMLFSATMTEEVKDL 319
Query: 323 AQLDLHHP--LFLTTGETRYKLPERLESYKLICESKL-KPLYLVALLQSLGEEKCIVFTS 379
A + L P LFL T L R E ++ + + + L AL+ + IVF
Sbjct: 320 AAVSLQKPVKLFLNNN-TDVALNLRQEFVRIRPQREGDREAILAALVCRTFHDHTIVFVQ 378
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
+ + HRL LL L ++ E G Q+ R + L F+E ++ VLV++D + RG+D
Sbjct: 379 TKKLAHRLRVLLG---LLGARVDELHGNLNQAQRLEALHRFKEMEVDVLVTTDLVARGLD 435
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
++ V V+N+ P ++ Y+HR GRTARAG+ GR +++ + E K K+++++A
Sbjct: 436 IKDVKTVINFTLPHTVQHYVHRVGRTARAGKSGRSVSMVGEQERKLLKEIVKQA 489
>gi|444731361|gb|ELW71716.1| putative ATP-dependent RNA helicase DDX27 [Tupaia chinensis]
Length = 735
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 203/480 (42%), Gaps = 133/480 (27%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ MG P+Q A I GL +D+C + TG+
Sbjct: 194 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGT---------------- 232
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
R LV++PTR+L +QV H++ + QF S+
Sbjct: 233 ----VTRVLVLVPTRELGIQV------------------HAVTKQLAQFCSI-------- 262
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
AVG GL V A L++A D+L+
Sbjct: 263 -----TTCLAVG---GLDVKSQEAA--------------------------LRAAPDVLI 288
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+DH++ F L ++ L++DE DR+L E ++ + +
Sbjct: 289 ATPGRLIDHLHNCPSFHLSNVEVLILDEADRMLDEYFEEQMKEI---------------- 332
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 333 ------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIFVN 370
Query: 337 ETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
P + + I ++ + + ALL + ++FT + + HR+ +L
Sbjct: 371 SNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHIVLGLM 430
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 431 G---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNT 487
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIESLR 512
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I R
Sbjct: 488 IKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILKFR 544
>gi|300121162|emb|CBK21543.2| unnamed protein product [Blastocystis hominis]
Length = 627
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 195/454 (42%), Gaps = 108/454 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
A+ MG ++ P+Q I L +D+C + TGSGKT +Y LPI++ L N A
Sbjct: 184 AVNEMGFTTPTPIQA----RCIPLALAGKDICAAAKTGSGKTAAYLLPILERLLYKNNAQ 239
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
+R L+V PTR+LA QV H+IA ++ S+
Sbjct: 240 NLIRVLIVAPTRELAQQV------------------HTIATKLTKYTSI----------- 270
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
+ L VG + + +L +RP DI+V TP
Sbjct: 271 ----------TCCLVVGGLPLQAQAVDLQRRP---------------------DIVVCTP 299
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GR++DH++ + L+ + +++DE DRLL + L +L+L
Sbjct: 300 GRMIDHVHNSMSVDLDDVEVVILDEADRLLELGFTEELHELLRL---------------- 343
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
C V+R ++ SAT+T D + L L L P+ +
Sbjct: 344 ------------CPVKRQ----------TLLFSATMTDDVSDLISLSLQKPVRVFVDPVN 381
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 399
++ +RL + + + L+ L++++ + + I+F E L G L +
Sbjct: 382 -QVVDRLVQFIRVKDESLRTAMLLSIITRHFKTETIIF---AERKAEAHLLHIILGLLGL 437
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
K E G Q+ R + L F + ++ L+++D RG+D++GV V+N P TYI
Sbjct: 438 KSAELHGNLNQTQRLRALDRFSKKEVDFLIATDVAARGLDIKGVQTVINLHMPKEEATYI 497
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
HR GRTARAG GR T + +D KKL+++A
Sbjct: 498 HRVGRTARAGHAGRAVTFVEEDRRLLMKKLVKQA 531
>gi|47217410|emb|CAG00770.1| unnamed protein product [Tetraodon nigroviridis]
Length = 456
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 191/448 (42%), Gaps = 116/448 (25%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR--AVR 100
+ +GI PVQ E P + + C+ + TGSGKT ++ LP++Q LS +
Sbjct: 18 KQLGIHKPTPVQ-----ENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQKLSEDPYGIF 72
Query: 101 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 160
CL V+ PTR+LA Q IAE F
Sbjct: 73 CL---VLTPTRELAYQ---------------------IAEQ------------------F 90
Query: 161 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 220
+ +GL + VG + + SEL +P ++VATPG
Sbjct: 91 RVLGKPLGLRDCIVVGGMDMVSQASELSNQPH---------------------VVVATPG 129
Query: 221 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 280
RL DHI ++ F++ + +L++DE DRLL + + D T +P
Sbjct: 130 RLADHIRSSSTFSMSKIQFLIMDEADRLLEQGCTDFT---------------KDLETIMP 174
Query: 281 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETR 339
+ +T ++ SATLT +L + ++ P F + ETR
Sbjct: 175 ALPAKRQT--------------------LLFSATLTDTLQELKNIAMNKPFFWESKSETR 214
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFG 395
+ L+ ++ K+K YLV L+Q+ ++ I+FT++ ++ L +L F
Sbjct: 215 T--VDELDQRYILTPEKVKDAYLVHLIQTFTDQHDDWSIIIFTNTCKNCQILTMMLQQFN 272
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
I + + +Q R L F+ ++L+++D RG+D+ V V+N++ P
Sbjct: 273 FPTISL---HSMMKQKQRFANLAKFKASVYKILIATDVAARGLDIPTVQVVINHNTPGLP 329
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEV 483
K YIHR GRTARAG+ G TL+ + ++
Sbjct: 330 KIYIHRVGRTARAGRNGVSITLVTQYDI 357
>gi|388580558|gb|EIM20872.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 801
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 218/490 (44%), Gaps = 119/490 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGP-GLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR 100
A+ +G + P+Q +T+ P L +D+ + TGSGKT ++ LP+++ L R
Sbjct: 219 AISGLGFTHPTPIQ-----KTVMPVALAGKDVVGQAVTGSGKTAAFILPVLERLMYRPKT 273
Query: 101 C-----LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R LV+ PTR+LA Q C +++ + D S +CV
Sbjct: 274 SSKGGETRVLVLCPTRELAQQ-----CFEVGQSLSKFMGDISFC-LCVG----------- 316
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
GLS+ L Q L +RP D++
Sbjct: 317 ------------GLSLKLQEQQ---------LKQRP---------------------DVV 334
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ATPGRL+DH+ + FTL+ L L++DE DR+L + ++ L +
Sbjct: 335 IATPGRLIDHVRNSPSFTLDALDILIMDEADRMLEDGFKDELDEI--------------- 379
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFL 333
++ C P R M+ SAT+T ++L +L L+ P LF+
Sbjct: 380 -------------VKEC---------PKNRQT-MLFSATMTDKVDELVRLSLNKPVRLFV 416
Query: 334 TTGETRYK-LPERLESYKLICESKLKP--LYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
++ K L + + ++ LK L++L + +++ I+F S HR+ +
Sbjct: 417 DPKKSTAKGLTQEFVRIRSNSKNDLKERTATLLSLCRRTFKQRTIIFFRSKALAHRMRIM 476
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
FG + + +E G Q R L+ F+ K L+++D +RG+D++GV V+N+D
Sbjct: 477 ---FGLMELNAEELHGDLSQEQRLNALERFKNQKSDYLLATDLASRGLDIKGVETVINFD 533
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA---DNDSCPIHSIPSSL 507
P I+ Y+HR GRTARAG GR +L+ + + K K +++++ DS +P+ +
Sbjct: 534 LPNQIEIYLHRVGRTARAGTSGRSVSLIGETDRKMLKNIVKRSSAQSTDSIKHRIVPTDV 593
Query: 508 IESLRPVYKS 517
+ + + +S
Sbjct: 594 LSDVAELVES 603
>gi|441639369|ref|XP_004090206.1| PREDICTED: probable ATP-dependent RNA helicase DDX27, partial
[Nomascus leucogenys]
Length = 786
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 144/288 (50%), Gaps = 43/288 (14%)
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 326 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI------- 378
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
IR C R M+ SAT+T + LA + L
Sbjct: 379 ---------------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSL 407
Query: 328 HHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTH 385
+P+ + P + + I ++ + + ALL + ++FT + + H
Sbjct: 408 KNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAH 467
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
R+ LL G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV
Sbjct: 468 RMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 524
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A
Sbjct: 525 VINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA 572
>gi|390333392|ref|XP_783077.3| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Strongylocentrotus purpuratus]
Length = 734
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 52/315 (16%)
Query: 205 LQE--LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
LQE L+ DI++ATPGRL+DH++ F+L + L++DE DR+L E ++ + +++
Sbjct: 266 LQEAALRKGPDIVIATPGRLIDHLHNAPTFSLSSVEVLILDEADRMLDEFFEEQMKEIIK 325
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
+ C V R M+ SAT+T L
Sbjct: 326 M----------------------------CSVARQ----------TMLFSATMTDQVKDL 347
Query: 323 AQLDLHHPLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTS 379
A + L +P+ + E Y L + + E + + + AL + C+VF
Sbjct: 348 ALVSLKNPVRIFVNENTDVAYNLQQEFIRIRDNREGDREAI-VSALCCRNFHDHCMVFVQ 406
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
+ + HRL +L G L IK+ E G Q+ R + L+ F+E I +LV++D RG+D
Sbjct: 407 TKKQAHRLHVIL---GLLGIKVGELHGDLSQTKRMEMLRMFKEDLIDILVATDLAARGLD 463
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 499
+EGV V+N+ P K Y+HR GRTARAG+ GR +L + E + K+L+++A N P
Sbjct: 464 IEGVKTVINFTMPNSEKHYVHRVGRTARAGRSGRSVSLAGEKERRMLKELVKRAKN---P 520
Query: 500 IHS--IPSSLIESLR 512
+ S IP ++ R
Sbjct: 521 VKSRIIPQGVVAKYR 535
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL--SNRAV 99
A+ + + P+Q A TI L +D+C + TG+GKT ++ LP+V+ L +
Sbjct: 167 AISGLNFTEPTPIQSA----TIPVALLGKDICACAATGTGKTAAFMLPVVERLLYKPKQA 222
Query: 100 RCLRALVVLPTRDLALQV-NSAR--CKY----CCKNIFGLIADHSIAEMCVQFDSLLFIS 152
R LVV PTR+L +Q+ N +R C++ CC + GL D + E ++ + I+
Sbjct: 223 PVTRVLVVTPTRELGVQIFNVSRQLCEFTNIECCLAVGGL--DIKLQEAALRKGPDIVIA 280
Query: 153 LP 154
P
Sbjct: 281 TP 282
>gi|383864023|ref|XP_003707479.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Megachile
rotundata]
Length = 741
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 212/489 (43%), Gaps = 118/489 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ M P+Q A TI L RD+C + TG+GKT +Y LP ++ L
Sbjct: 167 PLLK-AITTMNFVHPTPIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLY 221
Query: 97 RAVR---CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
R + R LV++PTR+L +QV + + + QF ++
Sbjct: 222 RPLDGPAISRVLVLVPTRELGVQV------------------YQVTKQLSQFTTV----- 258
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
VGL+VG + + + L K P D
Sbjct: 259 ----------------EVGLSVGGLDVKVQETVLRKNP---------------------D 281
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+ T F+L+ + L++DE DR+L E + + ++Q
Sbjct: 282 IVIATPGRLIDHLKNTPTFSLDSIEVLILDEADRMLDEYFAEQMKYIVQ----------- 330
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
+C R M+ SAT+T++ LA + L P+ +
Sbjct: 331 -----------------QCSRTRQ----------TMLFSATMTEEVKDLAAVSLDKPVKV 363
Query: 334 ---TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + + L + + E + + L AL+ + +VF V++ + L
Sbjct: 364 FVDSNQDVAFNLRQEFIRIRKEREGDREAI-LAALVCRTFHDHTMVF---VQTKKQAHRL 419
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
G L IK+ E G Q R + L+ F+ +I +L+++D RG+D+ GV V+N+
Sbjct: 420 HILLGLLGIKVGELHGNLTQPQRLENLRKFKNEEIDILLATDVAARGLDISGVKTVINFV 479
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 508
PA ++ YIHR GRTARAG++G +L + E K +++ A N P+ + IP +I
Sbjct: 480 MPATMQHYIHRVGRTARAGRVGVSVSLAGEQERSLVKDIIKNAKN---PVKNRIIPPDII 536
Query: 509 ESLRPVYKS 517
E KS
Sbjct: 537 EKYNKKLKS 545
>gi|320157377|ref|YP_004189756.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus MO6-24/O]
gi|319932689|gb|ADV87553.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus MO6-24/O]
Length = 408
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 207/485 (42%), Gaps = 117/485 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LDP L A++ MG P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L
Sbjct: 10 LDPNLLAAIEEMGYER--PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYL 65
Query: 95 SN---RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
+ R R L++ PTR+LA+
Sbjct: 66 QDFPRRKPGPARVLILTPTRELAM------------------------------------ 89
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQS 210
QV D A+A L++ G G+ Y + D+L Q
Sbjct: 90 ---QVADQARALAKNTSLNIFTITG-------------------GVQYQEHADILATTQ- 126
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
DI+VATPGRLM++I A R F + +L++DE DR+L + PTV +L+ NE
Sbjct: 127 --DIVVATPGRLMEYIQAER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NEC 177
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
R+ T L SA T+ GVE GF +A L DP A +D
Sbjct: 178 RWR-KQTMLFSA-----TLEGKGVE-GF-------------TADLLNDP---ADID---- 210
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
E + +++ + +S L L+ + + E+ IVF + E RL L
Sbjct: 211 -----AEPSRRERKKITQWYYRADSMEHKLALLKDIINNQAERTIVFLKTRE---RLADL 262
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
H ++ G Q R+ + FR+G + VL+++D RG+D+ V++VVN+D
Sbjct: 263 RAHLESEQVNCAWIQGEMPQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFD 322
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 510
P Y+HR GRTARAG+ G +++ + ++ + D I ++
Sbjct: 323 MPRSADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKE 376
Query: 511 LRPVY 515
LRP +
Sbjct: 377 LRPQH 381
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 208/473 (43%), Gaps = 106/473 (22%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
F L P LK A++ +G S P+Q A I L RD+C ++ TGSGKT
Sbjct: 146 FSSASFADLNISRPLLK-AVEALGYKSPTPIQAAC----IPLALAGRDICGSAVTGSGKT 200
Query: 84 LSYALPIVQTLSNRAVRCLRA---LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAE 140
++ALP ++ L +R R L A LV+ PTR+LA+Q+ HS+ E
Sbjct: 201 AAFALPFLERLLHRP-RGLAATYVLVLTPTRELAVQI------------------HSMIE 241
Query: 141 MCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 200
QF + +V L VG S+ + L + P
Sbjct: 242 KLAQFTDI---------------------NVALIVGGLSLQVQAITLRQSP--------- 271
Query: 201 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 260
+++VATPGRL+DH+ ++ LE L LV+DE DRLL ++ V
Sbjct: 272 ------------EVVVATPGRLIDHLRNSQSVGLEDLAVLVLDEADRLLEMGFR---EEV 316
Query: 261 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 320
++ R+ R T L SA F D+ V+ +++ +L Q
Sbjct: 317 AEVVRAAPRKR----QTMLFSAT--------------FNDQ-----VRDLVALSLKQPVR 353
Query: 321 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE-KCIVFTS 379
A P LT R K P + + +C L L A +S G+ + IVF S
Sbjct: 354 LAADAARAAPKLLTQEIVRLKGPAAAATKEAVC------LALCA--RSFGDRGRTIVFCS 405
Query: 380 SVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMD 439
+ HRL L G E G Q+ R ++L++FR G L+++D RG+D
Sbjct: 406 TKTKAHRLKILFGLAG--LPPAAELHGNMSQTARLESLESFRRGDTAFLLATDVAARGLD 463
Query: 440 VEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
++GV VVNYD P ++TY+HR GRTARAG G TL+ + K+L +K
Sbjct: 464 IQGVEVVVNYDAPPKLETYLHRIGRTARAGAAGVAVTLVEDGDRGLLKELGKK 516
>gi|402882297|ref|XP_003904684.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Papio anubis]
Length = 711
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 48/309 (15%)
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 251 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI------- 303
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
IR C R M+ SAT+T + LA + L
Sbjct: 304 ---------------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSL 332
Query: 328 HHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTH 385
+P+ + P + + I ++ + + ALL + ++FT + + H
Sbjct: 333 KNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAH 392
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
R+ LL G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV
Sbjct: 393 RMHILLGLMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 449
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--I 503
V+N+ P IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +
Sbjct: 450 VINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARIL 506
Query: 504 PSSLIESLR 512
P +I R
Sbjct: 507 PQDVILKFR 515
>gi|427407203|ref|ZP_18897408.1| hypothetical protein HMPREF9161_01768 [Selenomonas sp. F0473]
gi|425707678|gb|EKU70722.1| hypothetical protein HMPREF9161_01768 [Selenomonas sp. F0473]
Length = 428
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 192/451 (42%), Gaps = 116/451 (25%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
L++ GI + PVQ + I P RD+ + TG+GKT ++ LP+++ + + +
Sbjct: 17 LKHRGIVAPTPVQ----ERAIPPMRAGRDVIAQAQTGTGKTFAFLLPVLEKIKPQG-QAA 71
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
+ALVV PTR+LA+Q +AR V
Sbjct: 72 QALVVTPTRELAIQ--TAR-------------------------------------VAEP 92
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
+ A+G+ L G + I + +L + P+L +V TPGRL
Sbjct: 93 LGAALGIGTALVYGGADIERQKEKLRRHPQL---------------------IVGTPGRL 131
Query: 223 MDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
+DH+ RG L + +V+DE D +L+ + + +L+ T D +
Sbjct: 132 LDHVR--RGTLRLGSVNKVVLDEADEMLKMGFIEDVENILEHTAQDYQ------------ 177
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
+ SAT+ +L + +H+P + R
Sbjct: 178 --------------------------LALFSATMPDRIVRLTKRFMHNPAHVKIASERTT 211
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCTLLNHFGELR 398
L E +E L + K L L S+ EE +VF ++ E TH L T L G L
Sbjct: 212 L-ENIEQIVLSVDEGEK---LDRLCASVNEEAPYLAMVFCATKERTHALMTALAGRGYL- 266
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ SG Q+ R+ L+ FR KIQ+L ++D RG+D+EGV +V NYD P + Y
Sbjct: 267 --VDALSGDLTQTQRAFVLRQFRAAKIQILCATDIAARGLDIEGVTHVYNYDLPPTVTDY 324
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
IHR GRT RAG GR TL+ + +R +K+
Sbjct: 325 IHRIGRTGRAGARGRAVTLVTARQHERLRKM 355
>gi|357589331|ref|ZP_09127997.1| hypothetical protein CnurS_03986 [Corynebacterium nuruki S6-4]
Length = 449
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 192/453 (42%), Gaps = 110/453 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV-- 99
AL GI F +Q + T+ L +DL + TG GKTL + +P++ + + A
Sbjct: 21 ALAEKGIDRTFAIQ----ERTLPIALTGKDLIGQARTGMGKTLGFGVPLLDRVFDDADVT 76
Query: 100 ---RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+RALVV+PTR E+C+Q V
Sbjct: 77 APDGTVRALVVVPTR----------------------------ELCIQ-----------V 97
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ + A + L+V G G+ + E + L DI+V
Sbjct: 98 AEDLSDAAAHLPLTVTTIYG-------------------GVPF--EKQTEALAHGTDIVV 136
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGRL+D ++ + L H+ LV+DE D +L + + + ++ T + A+
Sbjct: 137 GTPGRLLD-LSRQQLLDLSHVEILVLDEADEMLDQGFLDDVKAIMAQTAPHRQTMLFSAT 195
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
+P +L RGF D P V++ T Q P TT
Sbjct: 196 --MPGPIVALS--------RGFMDHP----VRIRADTTDAQ------------PTHATTT 229
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T + +S+KL S L LLQ+ G + IVF + + + N +
Sbjct: 230 QTVF------QSHKLDRMS-----VLARLLQTPGRGRTIVF---ARTKRQAAMVANDLAD 275
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L ++ G RQ R ++L AFREG + ++V++D RG+DV+ V +V+NY P K
Sbjct: 276 LGFRVGAVHGDMRQKDREQSLAAFREGTVDIMVATDVAARGIDVDDVTHVINYQVPEDDK 335
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
TY+HR GRT RAG G TL+ DEV R++ +
Sbjct: 336 TYVHRIGRTGRAGHSGVAVTLVGWDEVTRWQAI 368
>gi|390341643|ref|XP_784918.3| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Strongylocentrotus purpuratus]
Length = 718
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 220/527 (41%), Gaps = 106/527 (20%)
Query: 22 SLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSG 81
++F LP + +N+G S + VQ Q I L +D I S TG+G
Sbjct: 108 AIFSSTQFSELPLHSFMISNIEKNLGFSQMTTVQ----QRAIPTLLHGQDTLIKSQTGTG 163
Query: 82 KTLSYALPIVQTLSNRAVRCLR-----ALVVLPTRDLALQVNSARCKYCCKNIFGLIADH 136
KTL+YA+P+VQ L + R AL+++PTR+LA
Sbjct: 164 KTLAYAVPVVQQLQGLQPKVQRLHGPYALILVPTRELA---------------------- 201
Query: 137 SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 196
C F++L+ + P F I P V L G+ + K E G
Sbjct: 202 -----CQSFETLVKLVKP-----FHWIVPGV-----LMGGE------------KKKSEKG 234
Query: 197 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAW 256
++ ++ILV+TPGRL+DHIN T T + ++++DE DRLL ++
Sbjct: 235 ----------RIRKGINILVSTPGRLVDHINTTEALTFSRVRWVILDEADRLLDLGFEKD 284
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL- 315
+ T+L NE + T L SA S R + KD + + K L L
Sbjct: 285 VTTILNAI---NEQCQNQKQTVLVSATLSEGVKRLANIT--LKDPVFIDVAKHQLDKALP 339
Query: 316 ----------TQD---PNKL-AQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 361
T++ P K +Q + + +PERL+ I SKL+ +
Sbjct: 340 PAPWSASSSSTEEKLRPAKTGSQTEETGEGETGEDAEMFSVPERLKQQFAIVPSKLRLVA 399
Query: 362 LVALL----QSLGEEKCIVFTSSVESTH---------RLCTLLNHFGELR----IKIKEY 404
L AL+ +S K +VF SS ES + C++L G + +
Sbjct: 400 LTALVAGGFKSPSGCKMLVFLSSCESVDFHYTLFQACKGCSILKEDGTASKREGMPLFRL 459
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
G Q+ R K AF E + VL+ +D RG+D+ V +V Y+ P Y+HR GR
Sbjct: 460 HGSMSQAERIKMYHAFSEARKGVLLCTDVAARGLDLPKVKWIVQYNIPGSAADYVHRVGR 519
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKL-LQKADNDSCPIHSIPSSLIES 510
TAR G+ G+ L EV+ + L Q+ P+ I SSL+ S
Sbjct: 520 TARIGKEGQALLFLAPSEVEYIRILEEQQIRIKEQPLDDILSSLMTS 566
>gi|161486658|ref|NP_933453.2| ATP-dependent RNA helicase SrmB [Vibrio vulnificus YJ016]
Length = 408
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 207/485 (42%), Gaps = 117/485 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LDP L A++ MG P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L
Sbjct: 10 LDPNLLSAIEEMGYER--PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYL 65
Query: 95 SN---RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
+ R R L++ PTR+LA+
Sbjct: 66 QDFPRRKPGPARVLILTPTRELAM------------------------------------ 89
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQS 210
QV D A+A L++ G G+ Y + D+L Q
Sbjct: 90 ---QVADQARALAKNTSLNIFTITG-------------------GVQYQEHADILATTQ- 126
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
DI+VATPGRLM++I A R F + +L++DE DR+L + PTV +L+ NE
Sbjct: 127 --DIVVATPGRLMEYIQAER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NEC 177
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
R+ T L SA T+ GVE GF +A L DP A +D
Sbjct: 178 RWR-KQTMLFSA-----TLEGKGVE-GF-------------TADLLNDP---ADID---- 210
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
E + +++ + +S L L+ + + E+ IVF + E RL L
Sbjct: 211 -----AEPSRRERKKITQWYYRADSMEHKLALLKDIINNQAERTIVFLKTRE---RLADL 262
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
H ++ G Q R+ + FR+G + VL+++D RG+D+ V++VVN+D
Sbjct: 263 RAHLESEQVNCAWIQGEMPQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFD 322
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 510
P Y+HR GRTARAG+ G +++ + ++ + D I ++
Sbjct: 323 MPRSADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKE 376
Query: 511 LRPVY 515
LRP +
Sbjct: 377 LRPQH 381
>gi|170099199|ref|XP_001880818.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644343|gb|EDR08593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 449
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 187/440 (42%), Gaps = 116/440 (26%)
Query: 57 AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQ 116
+VW+ IG +PTGSGKTL++A+PI+ L + + A V+ PTR+LA Q
Sbjct: 47 SVWKLVIGI----------APTGSGKTLAFAIPILHRLWDNP-QGYFACVLSPTRELAYQ 95
Query: 117 VNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL-SVGLAV 175
+++ F A+ A+G+ SV +
Sbjct: 96 ISAQ---------------------------------------FEALGAAMGVRSVVIVG 116
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G + +L ++P I+VATPGRL DH+N +
Sbjct: 117 GDDDRVQQAVQLAQKPH---------------------IIVATPGRLHDHLNFHTTQPII 155
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
HL V+DE DRLL +Q + ++Q +P RC
Sbjct: 156 HLGLQVLDEADRLLDLDFQREITEIMQ---------------SIPK--------ERC--- 189
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
+ SAT+T + +KL + L P+ + RY L + L+C
Sbjct: 190 ------------TYLFSATMTANVSKLQRASLSDPVRVDASLFRYTTVSTLLQHYLLCPL 237
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K + LV L+ SL + IVF +V L +L G + + G QS R
Sbjct: 238 VEKEVTLVYLINSLAQNLIIVFVRTVADAKCLSIILRSLGFEAVPLH---GELTQSQRLG 294
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
F+ GK ++LV++D +RG+DV V+ V+NYD P + K YIHR GRTARAG+ G+
Sbjct: 295 VFTRFKSGKSRILVATDVASRGLDVPNVDVVINYDVPTHSKDYIHRVGRTARAGRAGKSI 354
Query: 476 TLLHKDEVK---RFKKLLQK 492
++ + + + R +K+L +
Sbjct: 355 LMVTQYDAELMLRLEKVLNR 374
>gi|16126090|ref|NP_420654.1| DEAD/DEAH box helicase [Caulobacter crescentus CB15]
gi|221234860|ref|YP_002517296.1| ATP-dependent RNA helicase [Caulobacter crescentus NA1000]
gi|13423288|gb|AAK23822.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter
crescentus CB15]
gi|220964032|gb|ACL95388.1| ATP-dependent RNA helicase [Caulobacter crescentus NA1000]
Length = 517
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 196/466 (42%), Gaps = 120/466 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P A+ + G ++ P+Q + I L +D+ + TG+GKT ++ LP++ L
Sbjct: 9 LSPTTLQAVADTGYTTATPIQA----QAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDRL 64
Query: 95 -SNRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
S RA R RALV+ PTR+LA QV ++ KY
Sbjct: 65 QSGRAKARMPRALVIAPTRELADQVAASFEKY---------------------------- 96
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
A LS L +G S D+ ++L V
Sbjct: 97 -----------AKGTKLSWALLIGGVSFGDQ---------------------EKKLDRGV 124
Query: 213 DILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
D+L+ATPGRL+DH RG + + +LVVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFE--RGKLLMTGVQFLVVDEADRMLDMG------------------- 163
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
F+P +ER FK P P+ + SAT+ + +L + L P+
Sbjct: 164 ------FIPD------------IERIFKMTP-PKKQTLFFSATMPPEITRLTKQFLRDPV 204
Query: 332 FL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
+ TT +L ++ S + K K L L AL++ G E IVF +
Sbjct: 205 RIEVARPATTNANITQLLVKVPS----SDPKAKRLALRALIEKAGIETGIVFCNRKTEVD 260
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
+ L G I G Q+ R KTL FR G +++LV+SD RG+D+ V++
Sbjct: 261 IVAKSLKVHGYDAAPIH---GDLDQTQRMKTLADFRSGALKILVASDVAARGLDIPAVSH 317
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
V NYD P + Y+HR GRT RAG+ G + L+ + K F K+++
Sbjct: 318 VFNYDVPHHADDYVHRIGRTGRAGRTGITYMLVTPADDKGFDKVIK 363
>gi|336451455|ref|ZP_08621893.1| DNA/RNA helicase, superfamily II [Idiomarina sp. A28L]
gi|336281826|gb|EGN75098.1| DNA/RNA helicase, superfamily II [Idiomarina sp. A28L]
Length = 422
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 193/451 (42%), Gaps = 114/451 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAV 99
ALQ G ++ P+Q ++ I L RD+ + TG+GKT + LP+++ L + RA
Sbjct: 15 ALQAEGYTTPTPIQ----EQAIPAVLARRDVMAAAQTGTGKTAGFTLPMLEILKDGERAK 70
Query: 100 -RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
R L++ PTR+LA QV +
Sbjct: 71 PNEARVLILTPTRELA---------------------------------------AQVGE 91
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
A + LS + G G+ +P+ + +L+ VDILVAT
Sbjct: 92 SVETYAKGLKLSSAVVFG-------------------GVKINPQ--MMKLRRGVDILVAT 130
Query: 219 PGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
PGRL+D NA R LE LV+DE DR+L + + +++ ++ +N
Sbjct: 131 PGRLLDLYQQNAVRFPKLE---ILVLDEADRMLDMGFIHDIKRIIKALPANRQN------ 181
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
++ SAT + + LA+ ++ P+ ++
Sbjct: 182 --------------------------------LLFSATFSDEIRDLAKGLVNDPVEISV- 208
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
R ER+E KP L+ALL+ L + +VF+ + +RL L+ G
Sbjct: 209 SPRNTTAERVEQVIYPVLKADKPNMLMALLRQLDLPQVLVFSRTKHGANRLVKQLDKGGF 268
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L I G + Q R+K L F+ GK+Q+LV++D RG+D++ + VVNYD P +
Sbjct: 269 LATAI---HGNKSQGARTKALHEFKTGKVQILVATDIAARGLDIDQLPFVVNYDLPQVAE 325
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
Y+HR GRT RAG G +L+ DEVK K
Sbjct: 326 DYVHRIGRTGRAGASGNAISLVEGDEVKLLK 356
>gi|330040429|ref|XP_003239908.1| DEAD box protein [Cryptomonas paramecium]
gi|327206834|gb|AEA39010.1| DEAD box protein [Cryptomonas paramecium]
Length = 396
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 181/438 (41%), Gaps = 103/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + +TI L RD+ + TGSGKTL++ +PI+Q+L + + V++P+R
Sbjct: 22 FKYATKIQAKTIPYALKNRDILGYAQTGSGKTLAFVIPILQSLLKFQI-TFYSFVIVPSR 80
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV S I G+ +
Sbjct: 81 ELAFQVASY---------------------------------------IETIGYLFGIKI 101
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
GL A +IS + + P + ++ TPGRL+++ T
Sbjct: 102 GLLTSGIEYATQISIIKRSPHM---------------------MICTPGRLIEYTEKTDN 140
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
L+++ +V DE DRL + + +V++ N +F + F
Sbjct: 141 LFLKNIKKIVFDEADRLFQNDFDKKFLSVVE-----NLPKFKQSFLF------------- 182
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
SAT+T + KL ++ + +P+ + + +YK L +
Sbjct: 183 --------------------SATMTINIEKLKKISMSNPVKIKINK-KYKTVSTLVQNYI 221
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
K K YL + + I+F + ++ LL L K+ + G Q
Sbjct: 222 FMPFKSKNCYLSYICNEFSDCLAIIFVDTQICAEKIAVLLK---VLNFKVAYFHGKLSQD 278
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R+K L F+ KI++LVS+D +RG+D+ + ++NYD P Y + YIHR GRTARAG+
Sbjct: 279 KRAKILHDFKLKKIKILVSTDLASRGIDIPDIELIINYDIPLYTRDYIHRIGRTARAGKT 338
Query: 472 GRCFTLLHKDEVKRFKKL 489
GR L+ + ++ ++K+
Sbjct: 339 GRVINLVTQYDISSYQKI 356
>gi|329847732|ref|ZP_08262760.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
gi|328842795|gb|EGF92364.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
Length = 606
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 193/459 (42%), Gaps = 111/459 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L + L+ G PVQ + I L DL + TG+GKT ++ALPI+Q L
Sbjct: 9 LSPTLLMTLEREGYEKPTPVQA----QAIPYLLKGHDLLGIAQTGTGKTAAFALPILQHL 64
Query: 95 -SNRAV---RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF 150
SNR + + +RAL++ PTR+LA Q+ +
Sbjct: 65 LSNRKMPSPKMVRALILSPTRELASQIAES------------------------------ 94
Query: 151 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 210
F + +GL + G G+ Y P+ + L
Sbjct: 95 ---------FKTYSKGMGLQIATIYG-------------------GVKYGPQ--YKALLG 124
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
+D+LV TPGRL+DHI + L + V+DE D++L + + V +N
Sbjct: 125 GLDVLVCTPGRLIDHIE-QKTVDLSQVECFVLDEADQMLDLGFVKPIRQVASRLPKKRQN 183
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
F A+ +P G VL++ L DP ++
Sbjct: 184 LFFSAT--MPKEIG-------------------------VLASELLTDPKRVE------- 209
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+T T ER+ L E++ K L + E+ +VFT + S R+
Sbjct: 210 --ITPEAT---TAERVSQQVLFIEAQRKRALLSEMYADAVLERTLVFTRTKRSADRVAAY 264
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L G ++ G + QS R + L+AFR GK++ LV++D RG+DV+ V++V+NY+
Sbjct: 265 LQAGG---VEAAAIHGDKNQSQRERALQAFRAGKVRALVATDIAARGIDVDNVSHVINYE 321
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
P + Y+HR GRTARAG+ G TL DE + K +
Sbjct: 322 LPNVAEAYVHRIGRTARAGKSGVSITLCADDERRLLKDI 360
>gi|37197585|dbj|BAC93424.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
Length = 441
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 207/485 (42%), Gaps = 117/485 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LDP L A++ MG P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L
Sbjct: 43 LDPNLLSAIEEMGYER--PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYL 98
Query: 95 SN---RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
+ R R L++ PTR+LA+
Sbjct: 99 QDFPRRKPGPARVLILTPTRELAM------------------------------------ 122
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQS 210
QV D A+A L++ G G+ Y + D+L Q
Sbjct: 123 ---QVADQARALAKNTSLNIFTITG-------------------GVQYQEHADILATTQ- 159
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
DI+VATPGRLM++I A R F + +L++DE DR+L + PTV +L+ NE
Sbjct: 160 --DIVVATPGRLMEYIQAER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NEC 210
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
R+ T L SA T+ GVE GF +A L DP A +D
Sbjct: 211 RWR-KQTMLFSA-----TLEGKGVE-GF-------------TADLLNDP---ADID---- 243
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
E + +++ + +S L L+ + + E+ IVF + E RL L
Sbjct: 244 -----AEPSRRERKKITQWYYRADSMEHKLALLKDIINNQAERTIVFLKTRE---RLADL 295
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
H ++ G Q R+ + FR+G + VL+++D RG+D+ V++VVN+D
Sbjct: 296 RAHLESEQVNCAWIQGEMPQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFD 355
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 510
P Y+HR GRTARAG+ G +++ + ++ + D I ++
Sbjct: 356 MPRSADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKE 409
Query: 511 LRPVY 515
LRP +
Sbjct: 410 LRPQH 414
>gi|322696068|gb|EFY87866.1| DEAD box ATP-dependent RNA helicase, putative [Metarhizium acridum
CQMa 102]
Length = 877
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 164/384 (42%), Gaps = 125/384 (32%)
Query: 2 EEAKKKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW- 59
E+ K + LP W+ +P+ V+ P L L PR L + G + F VQ A
Sbjct: 292 EDESKPTYDTLPLWLSNPIRVAQDTKAPFTDLGIL-PRPSRILADKGYNEAFAVQTAAIP 350
Query: 60 ----QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLAL 115
PG DL +++ TGSGKTL+YALPIV+ +SN V LRALVVLPTR+L
Sbjct: 351 LLLPTSKHRPG----DLLVSAATGSGKTLAYALPIVRDISNGVVTRLRALVVLPTREL-- 404
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVG------L 169
+ Q +DVF A A +
Sbjct: 405 -------------------------------------VKQAQDVFEVCAKAYEGEDRKRV 427
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPE--DVLQELQ------------------ 209
+G+A+G SI E +I+R YDP+ +QE Q
Sbjct: 428 RIGVAIGSQSIKSEQEAIIERESR-----YDPDAYSKIQEEQRQQRANTFSADVDDTHDL 482
Query: 210 --------------------SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLL 249
S VD+L+ TPGRL++HI T GF+L+++ +LVVDE D+LL
Sbjct: 483 DSPNTDVRLGPWKGEVVDFSSRVDVLICTPGRLVEHIEQTPGFSLDYIRWLVVDEADKLL 542
Query: 250 REAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKM 309
+++Q WL VL+ R N+FS R F D Y + K+
Sbjct: 543 AQSFQGWLDLVLEKFRV---NKFS---------------------ARDFPDMAYSGVRKV 578
Query: 310 VLSATLTQDPNKLAQLDLHHPLFL 333
+LSATLT+D + L QL L P +
Sbjct: 579 ILSATLTRDLSLLNQLALRRPRLI 602
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 374 CIVFTSSVESTHRLCTLLNHF-GELRIKIKEYSGLQRQSVRSKTLKAFR--EGKIQVLVS 430
++FT S ES RL LL L +I + +R K L+AF ++++++
Sbjct: 712 SLIFTKSNESALRLSRLLTLLDASLTGQISTLTSTTPTHIRRKVLRAFTTPSSPVRLIIA 771
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
SD + RG+D+ + +V+NYD PA + Y+HR GRTARAG+ G +TL+ DE F
Sbjct: 772 SDLVARGIDIPKLGHVINYDLPASVAGYVHRVGRTARAGRSGCAWTLIGDDESGWF 827
>gi|380015035|ref|XP_003691517.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Apis florea]
Length = 710
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 215/481 (44%), Gaps = 118/481 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ M P+Q A TI L RD+C + TG+GKT +Y LP ++ L
Sbjct: 166 PLLK-AITAMNFVHPTPIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLY 220
Query: 97 RAVR---CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
R + R LV++PTR+L +QV + + + QF ++
Sbjct: 221 RPLDGPAISRVLVLVPTRELGVQV------------------YQVTKQLSQFTTI----- 257
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
VGLSVG G+ ++ + L+ + D
Sbjct: 258 ------------EVGLSVG-----------------------GLDVKAQEAV--LRRSPD 280
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+ T F+L+ + L++DE DR+L E + + +
Sbjct: 281 IVIATPGRLIDHLKNTPTFSLDSIEVLILDEADRMLDEYFAEQMKYI------------- 327
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL-- 331
+++C R ++ SAT+T++ LA + L+ P+
Sbjct: 328 ---------------VKQCSRSRQ----------TILFSATMTEEVKDLAAVSLNKPVKV 362
Query: 332 FLTTGE-TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
F+ + + + L + + E + + L AL+ + +VF V++ + L
Sbjct: 363 FIDSNQDVAFNLRQEFIRIRKEREGDREAI-LAALICRTFHDHVMVF---VQTKKQAHRL 418
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
G L IK+ E G Q R + L F+ +I +L+++D RG+D+ GV V+N+
Sbjct: 419 HILLGLLGIKVGELHGNLTQPQRLENLTKFKNEEIDILLATDVAARGLDISGVKTVINFV 478
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 508
PA I+ YIHR GRTARAG++G +L + E K++++ A N P+ + IPS +I
Sbjct: 479 MPATIQHYIHRVGRTARAGRVGVSVSLAGEQERSLVKEIIKNAKN---PVKNRIIPSDII 535
Query: 509 E 509
+
Sbjct: 536 D 536
>gi|323491504|ref|ZP_08096686.1| ATP-dependent RNA helicase SrmB [Vibrio brasiliensis LMG 20546]
gi|323314258|gb|EGA67340.1| ATP-dependent RNA helicase SrmB [Vibrio brasiliensis LMG 20546]
Length = 411
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 209/483 (43%), Gaps = 117/483 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LDP L +A++ MG P Q+ E I L RD+ ++PTG+GKT ++ALP +Q L
Sbjct: 10 LDPNLLLAIEEMGYDR--PTQIQA--EAIPQALDGRDVLASAPTGTGKTAAFALPALQFL 65
Query: 95 SN---RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
+ R R L++ PTR+LA+
Sbjct: 66 QDFPRRKPGPARVLILTPTRELAM------------------------------------ 89
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQS 210
QV D A+A L++ G G+ Y + D+L Q
Sbjct: 90 ---QVADQARALAKHTNLNIFTITG-------------------GVQYQEHADILATTQ- 126
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
DI+VATPGRLM++I A R F + +L++DE DR+L + PTV +L+ +E
Sbjct: 127 --DIVVATPGRLMEYIEAER-FDCRAIEWLILDEADRMLDMGFG---PTVDRLS---SEC 177
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
R+ T L SA T+ GVE GF +A L +DP A++D
Sbjct: 178 RWR-KQTLLFSA-----TLEGKGVE-GF-------------TADLLKDP---AEID---- 210
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
E + +++ + + L L+ + + E+ IVF + E RL L
Sbjct: 211 -----AEPSRRERKKIAQWYHRADDMTHKLELLKKILTEQAERSIVFLKTRE---RLAEL 262
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
+ +I G Q R+ + FR+G + VL+++D RG+D+ V++V+NYD
Sbjct: 263 RTELEKAQIPCAWIQGEMPQDRRNNAIARFRDGTVNVLLATDVAARGIDLPDVSHVINYD 322
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 510
P Y+HR GRTARAG+ G +L+ + ++ + D I I+
Sbjct: 323 MPRSADVYLHRIGRTARAGKKGNAVSLVEAHDQPMIDRVARYVKED------IKERFIKE 376
Query: 511 LRP 513
+RP
Sbjct: 377 MRP 379
>gi|27363997|ref|NP_759525.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus CMCP6]
gi|27360114|gb|AAO09052.1| ATP-dependent RNA helicase SrmB [Vibrio vulnificus CMCP6]
Length = 408
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 207/485 (42%), Gaps = 117/485 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
LDP L A++ MG P Q+ E I L RD+ ++PTG+GKT ++ LP +Q L
Sbjct: 10 LDPNLLAAIEEMGYER--PTQIQA--EAIPQALEGRDILASAPTGTGKTAAFVLPALQYL 65
Query: 95 SN---RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
+ R R L++ PTR+LA+
Sbjct: 66 QDFPRRKPGPARVLILTPTRELAM------------------------------------ 89
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICY-DPEDVLQELQS 210
QV D A+A L++ G G+ Y + D+L Q
Sbjct: 90 ---QVADQARALAKNTSLNIFTITG-------------------GVQYQEHADILATTQ- 126
Query: 211 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
DI+VATPGRLM++I A R F + +L++DE DR+L + PTV +L+ NE
Sbjct: 127 --DIVVATPGRLMEYIQAER-FDCRAIEWLILDEADRMLDMGFA---PTVDRLS---NEC 177
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
R+ T L SA T+ GVE GF +A L DP A +D
Sbjct: 178 RWR-KQTMLFSA-----TLEGKGVE-GF-------------TADLLNDP---ADID---- 210
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
E + +++ + ++ L L+ + + E+ IVF + E RL L
Sbjct: 211 -----AEPSRRERKKITQWYYRADNMEHKLALLKDIINNQAERTIVFLKTRE---RLADL 262
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
H ++ G Q R+ + FR+G + VL+++D RG+D+ V++VVN+D
Sbjct: 263 RAHLESEQVNCAWIQGEMPQDRRNNAIARFRDGSVNVLLATDVAARGIDLPDVSHVVNFD 322
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIES 510
P Y+HR GRTARAG+ G +++ + ++ + D I ++
Sbjct: 323 MPRSADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDRVARYVKED------IKERFVKE 376
Query: 511 LRPVY 515
LRP +
Sbjct: 377 LRPQH 381
>gi|170095563|ref|XP_001879002.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646306|gb|EDR10552.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 654
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 180/433 (41%), Gaps = 114/433 (26%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLRALVVLPTRDLALQVNSARCKYCC 126
+D+ + TGSGKTL++ +P+++ L R A L AL++ PTR+LA+Q
Sbjct: 39 KDVLGAAQTGSGKTLAFLVPVLEILYRRKWGAADGLGALIISPTRELAVQ---------- 88
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
IF DV +I S GL +G ++ DE
Sbjct: 89 --IF---------------------------DVLRSIGGYHSFSAGLVIGGKNLKDERDR 119
Query: 187 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 246
L S ++ILVATPGRL+ H++ T GF ++L LV+DE D
Sbjct: 120 L----------------------SRMNILVATPGRLLQHMDQTVGFDADNLQVLVLDEAD 157
Query: 247 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 306
R+L +Q L +L + LP + +L
Sbjct: 158 RILDMGFQKTLAALL---------------SHLPKSRQTL-------------------- 182
Query: 307 VKMVLSATLTQDPNKLAQLDLHHPLFL---TTGETRYKLPERLESYKLICESKLKPLYLV 363
+ SAT TQ + LA+L L P+++ + +P+ LE + +ICE K L
Sbjct: 183 ---LFSATQTQSVSDLARLSLKDPVYVGINVASSSTSTMPQNLEQHYVICELDKKLDVLW 239
Query: 364 ALLQSLGEEKCIVFTSSVEST----HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA 419
+ +++ + K IVF SS + C + H G + + G Q+QS R
Sbjct: 240 SFIKTHLQSKIIVFMSSCKQVRFVFETFCKM--HPG---VPLLHLHGKQKQSARLTMYTK 294
Query: 420 FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLH 479
F VL ++D RG+D V+ V+ D P TYIHR GRTAR G+ L
Sbjct: 295 FSSISHAVLFATDIAARGLDFPSVDWVLQMDAPEDADTYIHRVGRTARYESKGKALLFLM 354
Query: 480 KDEVKRFKKLLQK 492
E + K LQK
Sbjct: 355 PSEEEGMKVALQK 367
>gi|407927370|gb|EKG20264.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 363
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 150/330 (45%), Gaps = 61/330 (18%)
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+ F A+ +G+ + VG + + L K P I
Sbjct: 21 QISQQFEALGSLIGVKCAVLVGGMDMTPQQIALGKNPH---------------------I 59
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGRL+DH+ T+GF+L+ L YLV+DE DRLL + + +L++
Sbjct: 60 IVATPGRLLDHLENTKGFSLKQLKYLVMDEADRLLDLDFGPIIDKILKV----------- 108
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
LP K RR + SAT++ L + L +PL ++
Sbjct: 109 ----LP------KEGRRT----------------YLFSATMSSKVESLQRASLSNPLRVS 142
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+ ++ L + L K K LYL+ LL + I+FT +V T R+ LL
Sbjct: 143 ISSSSHQTVSTLIQHFLFVPHKHKDLYLIHLLNDMIGHPTIIFTRTVNETQRIAILLRAL 202
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G I + G QS R L F+ +LV++D RG+D+ V+ V+NYD P
Sbjct: 203 GFGAIPLH---GQLSQSARLGALGKFKAKTRDILVATDVAARGLDIPSVSYVINYDLPPD 259
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
KTY+HR GRTARAG+ G+ +++ + +V+
Sbjct: 260 SKTYVHRVGRTARAGKSGKAVSIVTQYDVE 289
>gi|154417727|ref|XP_001581883.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916114|gb|EAY20897.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 441
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 206/459 (44%), Gaps = 117/459 (25%)
Query: 44 QNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR 103
+ +GIS VQ A ++ I + + S TG+GKT ++ALPI+ TLS +
Sbjct: 19 KEIGISKPTAVQQACVKQIITG----HNCIVISQTGTGKTAAFALPIISTLSKDPY-GIY 73
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
ALV+ PTR+LA Q+ C+ IFG + + A I
Sbjct: 74 ALVISPTRELAQQI----CQQF--KIFG-------------------------RGMNADI 102
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
P +G GLA I D+ S L K P I+VATPGR++
Sbjct: 103 CPIIG---GLA-----ITDQASALEKNPH---------------------IVVATPGRIL 133
Query: 224 DHI-NATRG---FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
H+ +A++G F+ ++L YLV+DE DRL ++ Y W VL++ + E R + +
Sbjct: 134 HHLRSASKGNTRFSFDNLQYLVLDEVDRLFKDGY--W-DDVLEIIKYLPEKRQTLCFSAT 190
Query: 280 PSAFGSLKTI-------RRCGVERGFKDKPYPRLVKMVLSA---TLTQDPNKLAQLDLHH 329
S L TI C P P + K S T +P
Sbjct: 191 KSDQVDLLTIMTKPPSTSSC---------PLPSVGKSWFSDDKLTFYWEPTD-------- 233
Query: 330 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE----EKCIVFTSSVESTH 385
L ++E K++ + + + +YL+ ++Q L E ++ IVF S+ E+
Sbjct: 234 -----------DLKPKIEHVKVLVQDEGREVYLMIIIQKLMEADLYKQVIVFASTKEAAQ 282
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
+ +L +F K ++S R K L+ FR G+ ++LV++D RG+D+ V+N
Sbjct: 283 TITLILRNFS---YKTAVMHSDMQESERLKELEEFRAGRQRILVATDVAARGLDIPFVDN 339
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
V++++ P TY+HRAGRT RAG+ GR + E K
Sbjct: 340 VIHFNPPQNAATYVHRAGRTGRAGREGRSILFVSGREKK 378
>gi|403720926|ref|ZP_10944236.1| putative ATP-dependent RNA helicase [Gordonia rhizosphera NBRC
16068]
gi|403207467|dbj|GAB88567.1| putative ATP-dependent RNA helicase [Gordonia rhizosphera NBRC
16068]
Length = 529
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 190/462 (41%), Gaps = 106/462 (22%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+D R+ AL + G + F +Q + T+ + DL + TG GKT + +P++ L
Sbjct: 20 VDDRIVAALADDGKTHTFAIQ----ELTLPLAMAGDDLIGQARTGMGKTFGFGVPLLHRL 75
Query: 95 ---SNRAVRCL----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
+R L RALV++PTR E+C+Q
Sbjct: 76 VHAEESGLRALDNTPRALVIVPTR----------------------------ELCLQVTG 107
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
L ++ ++ FA D + +K + G Y E + E
Sbjct: 108 DLEVAARRLDVTFA--------------------DRATRPLKITSIYGGRPY--ESQIAE 145
Query: 208 LQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
L+S VD++V TPGRL+D A +G L + LV+DE D +L
Sbjct: 146 LKSGVDVVVGTPGRLLDL--AQQGHLILGKVAILVLDEADEMLDLG-------------- 189
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
FLP +ER P PR M+ SAT+ LA+
Sbjct: 190 -----------FLPD------------IERIMASLPTPRQT-MLFSATMPGPIVTLARTF 225
Query: 327 LHHPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
LH P + + ER + + K + +LQ+ G ++FT + +
Sbjct: 226 LHRPTHIRAEHANDSAVHERTTQHVYRAHALDKAELVARILQADGRGATMIFTRTKRTAQ 285
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
++ + GE + G Q R K LK FR G I VLV++D RG+D++ V +
Sbjct: 286 KVA---DDLGERGFSVGAVHGDLGQVAREKALKRFRNGDIDVLVATDVAARGIDIDDVTH 342
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
V+NY P KTYIHR GRT RAG+ G TL+ DE+ R++
Sbjct: 343 VINYQCPDDDKTYIHRIGRTGRAGRTGTAITLVDWDELHRWE 384
>gi|307200753|gb|EFN80820.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 334
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 143/278 (51%), Gaps = 42/278 (15%)
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+ T+GF+L +L +LV+ E DR+L ++ + +L++
Sbjct: 21 IIIATPGRLVDHLENTKGFSLRNLKFLVMGEADRILNMDFEIEVDKILRV---------- 70
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
+P RR ++ SAT+T+ KL + L +P+ +
Sbjct: 71 -----IPRE-------RRT----------------LLFSATMTKKVQKLQRASLRNPVKV 102
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
T+Y+ E+L+ Y + K K +YLV +L L ++F ++ +T R LL +
Sbjct: 103 EVS-TKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRN 161
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G + + G Q+ R L F+ +L+S+D +R +D+ V+ V+N+D P
Sbjct: 162 LGFTAVPL---HGQMSQNKRIAALTKFKARNRSILISTDVASRSLDIPHVDIVINFDIPT 218
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
+ K YIHR GRTARAG+ GR T + + +V+ ++++ Q
Sbjct: 219 HSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRIEQ 256
>gi|440798652|gb|ELR19719.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 906
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 200/467 (42%), Gaps = 96/467 (20%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS------ 95
A+++ G P+Q+ ++I GL RDL + TGSGKT ++ LP++ +S
Sbjct: 489 AIESAGYKQPMPIQM----QSIPIGLQGRDLIGLAETGSGKTCAFVLPMLVYISKLPPMT 544
Query: 96 -NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A AL++ PTR+LALQ+ K+
Sbjct: 545 AENAADGPYALIMAPTRELALQIEQEAAKF------------------------------ 574
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
A A+G VG SI E G L+ +I
Sbjct: 575 ---------ASAMGFRTVAVVGGQSIE------------EQGFS---------LRRGAEI 604
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+D + R L Y+V+DE DR++ ++ + T+L S N S+
Sbjct: 605 LIATPGRLVDCLE-QRYVVLNQCNYVVLDEADRMVDMGFEVQVTTILDAMPSSNLK--SE 661
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
T +L+ + V R ++ SAT+ +LA+ L HP +
Sbjct: 662 DETTAEEQMAALQEEKPDHVYR----------TTVMFSATMPVAVERLARKYLRHPAVIQ 711
Query: 335 TGE---TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
GE K+ +R+E K + K K L+ LL S +VF + ++ L +
Sbjct: 712 IGEVGKAGEKIEQRVEFVKGDNDKKNK---LLNLLYSGIAPPIMVFVNQKKNCDILSRAI 768
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
N G + +SG + Q +R + + F+ G I +LVS+D RG+DV+GV +V+NYD
Sbjct: 769 NKAGFRSATL--HSG-KSQELREEAMDGFKAGTIDILVSTDVAGRGIDVKGVTHVINYDM 825
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQKADN 495
I Y HR GRT RAG G + + D+ F K++LQ + N
Sbjct: 826 AKSIADYTHRIGRTGRAGMKGVAVSFITNDDADLFYDLKQMLQASGN 872
>gi|327400905|ref|YP_004341744.1| DEAD/DEAH box helicase domain-containing protein [Archaeoglobus
veneficus SNP6]
gi|327316413|gb|AEA47029.1| DEAD/DEAH box helicase domain protein [Archaeoglobus veneficus
SNP6]
Length = 389
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 197/452 (43%), Gaps = 112/452 (24%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIF 130
D+ S TGSGKTL++A+PI++ + + ++ALV+ PTR+LA
Sbjct: 42 DVVAQSETGSGKTLAFAIPIIE--AAETGKGIQALVLTPTRELA---------------- 83
Query: 131 GLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKR 190
Q+++ F + GL +
Sbjct: 84 -----------------------NQIENEFRRFSRHKGLRIA------------------ 102
Query: 191 PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLR 250
+ G+ +P+ +++L+ A D++V TPGRL+DH+ + + Y V+DE DR+L
Sbjct: 103 -NIHGGVPIEPQ--IRDLRRA-DVVVGTPGRLLDHVR-RKTVDFSRVEYFVIDEADRMLD 157
Query: 251 EAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMV 310
+ +K I RC P R ++
Sbjct: 158 MGF-----------------------------IDDVKAIMRC--------TPKTRQ-SLL 179
Query: 311 LSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG 370
SAT+ + LA + +P + T E P+ L Y + K LV LL+
Sbjct: 180 FSATIPPEVRALASRYMKNPKTIRTKE--LVDPKLLNQYYYDVDDSEKFSMLVHLLRKEN 237
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 430
+K +VFT+ +++ + L G K G QS R + ++ FR+G+I+VLV+
Sbjct: 238 PKKALVFTNMRKTSDIVAKNLFMHG---FKASVLHGGLTQSKRDRMMERFRKGEIRVLVA 294
Query: 431 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
+D +RG+DV+GV +V NYD P+ + YIHR GRTARAG+ G+ T+L + + F++++
Sbjct: 295 TDVASRGLDVKGVTHVFNYDVPSKAEDYIHRIGRTARAGKNGKAVTILGRKDHGSFRRIM 354
Query: 491 QK----ADNDSCPIHSIPSSLIESLRPVYKSG 518
K + +P + + RP +K G
Sbjct: 355 VKYGLTIERLEETFQEVPFKYVTTYRP-HKGG 385
>gi|269469155|gb|EEZ80700.1| ATP-dependent RNA helicase RhlE [uncultured SUP05 cluster
bacterium]
Length = 434
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 206/477 (43%), Gaps = 118/477 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN---RA 98
A++ G P+Q +++I L +DL + TG+GKT + LPI+Q LS
Sbjct: 15 AVKQQGYDKPSPIQ----EKSIPIVLDGKDLMAAAQTGTGKTAGFTLPILQLLSKGKPTN 70
Query: 99 VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
+R L++ PTR+LA QV+D
Sbjct: 71 SNQVRTLILTPTRELA---------------------------------------AQVQD 91
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
A + L + G G+ +P+ +++L+ VDILVAT
Sbjct: 92 SVATYGKHLPLKSTVVFG-------------------GVKINPQ--MKKLRGGVDILVAT 130
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRL+D + + + L +V DE DR+L + + +L++
Sbjct: 131 PGRLLD-LYSQNAVKFDQLEIIVFDEADRMLDMGFIHDIKRILKV--------------- 174
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
LP P+ ++ SAT + + KLA+ +H+P+ ++T
Sbjct: 175 LP-----------------------PKRQTLMFSATFSDEIRKLAKSLVHNPVEVSTTPR 211
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+ + + +SK + L L L++ + +VF+ + +R+ T L G
Sbjct: 212 NTTVKSVKQWIHPVDKSKKQAL-LTKLIKDHSWYQVLVFSRTKHGANRIATQLGKRG--- 267
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
I G + Q R++ L F++GK+ VLV++D RG+D+ + +VVN+D P + Y
Sbjct: 268 ITAAAIHGNKSQGARTRALADFKDGKVNVLVATDIAARGIDIIELPHVVNFDLPHVPEDY 327
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQ-KAD----NDSCPIHSIPSSL 507
+HR GRT RAG G +L+ DEVK+ ++L+Q K D +D P H +P SL
Sbjct: 328 VHRIGRTGRAGSKGEAISLVSADEVKQLFDIERLIQNKLDRIMVDDFVPDHDLPESL 384
>gi|170579441|ref|XP_001894832.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158598430|gb|EDP36322.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 378
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 70/325 (21%)
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+ D FAA+ ++GL +G+ VG + S+L +RP I
Sbjct: 2 QIGDQFAALGVSIGLKIGIIVGGKDRVAQSSDLARRPH---------------------I 40
Query: 215 LVATPGRLMDHINA---TRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
+VATPGRL DH+ + G E L +LV+DE DRLL Y L T+L
Sbjct: 41 VVATPGRLADHLESDSENTGKLFEKLRFLVLDEADRLLDGQYSIELKTIL---------- 90
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
TFLP +L + SAT+T ++L Q+ + P
Sbjct: 91 -----TFLPKQRQTL-----------------------LFSATITSALSQLHQVSVKKPY 122
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIVFTSSVESTHRL 387
F ++ ++LE ++C +K YLV ++++ E+ ++F+ + L
Sbjct: 123 FF-EDKSEIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPESLILIFSHTCRECQAL 181
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
+ + G K+ Q R+ +L FR G+I++L+ +D +RG+D+ V+ VV
Sbjct: 182 AIMFHGLG---FKVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVV 238
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLG 472
N++ P KTYIHR GR+ARAG+ G
Sbjct: 239 NHNVPQNPKTYIHRVGRSARAGRFG 263
>gi|358365431|dbj|GAA82053.1| DEAD/DEAH box helicase [Aspergillus kawachii IFO 4308]
Length = 861
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 162/330 (49%), Gaps = 35/330 (10%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERD 71
PW+ +P+ S E L +D L L++ G F VQ V + GP D
Sbjct: 240 PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYHEAFAVQSTVIPLLLQGPTNHPGD 298
Query: 72 LCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 131
LCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+ C G
Sbjct: 299 LCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREA-CELCAAG-SG 356
Query: 132 LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS----SIADEISEL 187
L ++ + ++ + SL +V V+ + +V L G ++ D ISE
Sbjct: 357 LRVASAVGNVAIKDEQR---SLMRVDQVYGPATFKLRQNVQL-TGDDWTNFNLQDYISEA 412
Query: 188 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 247
+ G + E VDIL+ TPGRL+DH+ T+GFTL++L +LV+DE DR
Sbjct: 413 GDLSESLPGYVHRSE-------PNVDILICTPGRLVDHLRYTKGFTLKNLDWLVIDEADR 465
Query: 248 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKPYPRL 306
LL E++Q W+ V+ S + P AFG S + G+ K+ PR
Sbjct: 466 LLNESFQEWVDVVM----------TSLDARKAPGAFGFSGNFLSELGLPIQSKE---PR- 511
Query: 307 VKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
K+VLSAT+T+D KL L L +P + G
Sbjct: 512 -KIVLSATMTRDVTKLNSLRLANPKLVVIG 540
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R GKI V++++D +RG+D+ + +VVNYD PA I TY+HR GRTAR
Sbjct: 724 NKSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITTYVHRVGRTAR 783
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKADN 495
AGQ G +TL+ E K F + K +
Sbjct: 784 AGQEGSAWTLVAHREGKWFASQIAKGSD 811
>gi|403350666|gb|EJY74800.1| DEAD/DEAH box helicase family protein [Oxytricha trifallax]
Length = 795
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 197/468 (42%), Gaps = 104/468 (22%)
Query: 30 DHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALP 89
++ P + P+ L+ GIS LFPVQ + + +DL + TGSGKTL +ALP
Sbjct: 103 ENFPQITPKTVELLKKRGISGLFPVQYSSFNHIWN----RKDLIVRDLTGSGKTLGFALP 158
Query: 90 IVQTLSNR---AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
V+ L R ++A+V+ PTR E+ +Q
Sbjct: 159 TVEYLRKNKLFGTRKIQAMVLAPTR----------------------------ELALQV- 189
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
S F +L + + + G+S+ +D
Sbjct: 190 SKEFNALKHFEGEYNVLTVYGGVSI------------------------------DDQTY 219
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
+L+ VDI V T GR+MDH+ R F L L++DETD++L++ ++ + ++Q
Sbjct: 220 QLRKGVDIFVGTTGRVMDHME-RRNFDFTDLKTLILDETDQMLKQGFKEDVERIMQ---- 274
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
++K R G++ P VK V + D +D
Sbjct: 275 ------------------TIKAARPNGMQVLLFSATIPFWVKQVAKEQMAPD---FQMVD 313
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTH 385
L L T +T + + C + + L +L G + IVF S+ +
Sbjct: 314 LAQNLKNKTSKT-------VNHLSINCPYQNRMSALADILICYGGLGQTIVFCSTKAEAN 366
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
L LL+ +++ I+ G Q+ R TLK F+E K VLV++D +RG+D+ V+
Sbjct: 367 SL--LLSD--KIKQDIEVMHGDIAQNQREVTLKRFKENKFSVLVATDVASRGLDIPNVDL 422
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
V+ + P +++YIHRAGRTARAG+ G C T K + QKA
Sbjct: 423 VIQVEPPNDVESYIHRAGRTARAGRTGTCITFYGKKHQYMINMIEQKA 470
>gi|432328452|ref|YP_007246596.1| DNA/RNA helicase, superfamily II [Aciduliprofundum sp. MAR08-339]
gi|432135161|gb|AGB04430.1| DNA/RNA helicase, superfamily II [Aciduliprofundum sp. MAR08-339]
Length = 450
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 188/442 (42%), Gaps = 117/442 (26%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F V + IGP + DL + S TGSGKTL++ +PI + L+ R L A+V++PTR
Sbjct: 21 FKEPTEVQESVIGPAIDGMDLIVQSKTGSGKTLAFLIPIFEKLN----RGLEAIVLVPTR 76
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV V +A G S
Sbjct: 77 ELA---------------------------------------QQVDRVARILAKGHGKST 97
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ G S+ ++I L +++ TPGR+MD + RG
Sbjct: 98 VVIYGGVSMENQIRGL----------------------KHASVVIGTPGRVMDLMR--RG 133
Query: 232 F-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIR 290
+ L + V+DE DR+L + D L A
Sbjct: 134 YLDLSRIKIFVLDEADRMLDMGF------------------IEDIRWILSKA-------- 167
Query: 291 RCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHP--LFLTTGETRYKLPERLE 347
PR +M+L SAT+ Q+ LA+ + +P + L+ E E +
Sbjct: 168 -------------PREKQMMLFSATMPQEIINLARHYMSNPEKIILSADEI---TAENVS 211
Query: 348 SYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGL 407
+ + K L +L+ + G K +VF ++ +T + +L +G + G
Sbjct: 212 QFYVEVGEINKIAKLSSLIINEGG-KYLVFCNTKRNTKSVAEILQKYG---FRAFALHGD 267
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
RQ+ RS+T+ AF++GKI +L+S+D RG+DV G+ +VVNYD P Y K Y+HR GRT R
Sbjct: 268 MRQASRSRTMDAFKQGKINILISTDVAARGIDVHGITHVVNYDVPQYPKDYVHRIGRTGR 327
Query: 468 AGQLGRCFTLLHKDEVKRFKKL 489
G+ T + ++E++ F+++
Sbjct: 328 LDARGKAITFVSREEMEYFRRI 349
>gi|317132682|ref|YP_004091996.1| DEAD/DEAH box helicase [Ethanoligenens harbinense YUAN-3]
gi|315470661|gb|ADU27265.1| DEAD/DEAH box helicase domain protein [Ethanoligenens harbinense
YUAN-3]
Length = 435
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 211/490 (43%), Gaps = 122/490 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + AL G P+Q +++I L +RDL + TG+GKT ++A+PI+ L
Sbjct: 8 LNPSILKALAAAGYEQPTPIQ----EQSIPYILEKRDLLGTAQTGTGKTAAFAVPILDLL 63
Query: 95 -----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
+ R +RALV+ PTR+LA+Q I E Q+ L
Sbjct: 64 CREHGQSTGSRHIRALVLSPTRELAIQ---------------------IKESFDQYSRFL 102
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
+ + I +S++ + +L G+ D+L
Sbjct: 103 HLR------------------------NTVIFGGVSQIPQVSRLREGV-----DIL---- 129
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
VATPGRL+D +N R L H+ Y V+DE DR+L ++ V ++ +
Sbjct: 130 ------VATPGRLLDLMN-QRHVDLSHVSYFVLDEADRMLD---MGFIHDVHKVVEKLPQ 179
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
NR + ++ SAT+ D +LA L +
Sbjct: 180 NRQT-----------------------------------LLFSATMPPDIARLADKLLKN 204
Query: 330 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
P ++ E +E + K K LV LL++ E +VF+ + H
Sbjct: 205 PAQVSVAPVS-STAETVEQKLFYVDKKNKKHLLVHLLKTADMESVLVFS---RTKHGANK 260
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
++ H + I K G + QS R + L+ F+ KI VLV++D RG+DV +++V+NY
Sbjct: 261 IVEHLEKAGIPSKAIHGNKSQSARQQALREFKSRKIHVLVATDIAARGIDVTELSHVINY 320
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK---ADNDSCPIHSI 503
D P +TY+HR GRT RAGQ G F+ ++E ++ ++L+ K +ND H
Sbjct: 321 DLPNEPETYVHRIGRTGRAGQSGMAFSFCDEEEHDYLRTIERLIGKHIPVEND----HPY 376
Query: 504 PSSLIESLRP 513
P+++ + P
Sbjct: 377 PATMAPTAPP 386
>gi|363749669|ref|XP_003645052.1| hypothetical protein Ecym_2514 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888685|gb|AET38235.1| Hypothetical protein Ecym_2514 [Eremothecium cymbalariae
DBVPG#7215]
Length = 620
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 149/282 (52%), Gaps = 47/282 (16%)
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
DIL+ TPGRL+DH++ + F+L++L +L++DE DRLL +++Q W ++
Sbjct: 308 DILIVTPGRLVDHLHMS-TFSLQNLKFLILDEADRLLNQSFQNWCSELM----------- 355
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
+E DK ++KM+ SATLT + KL +L LH+P
Sbjct: 356 -------------------TKIEAEKLDKNPGNILKMIFSATLTTNTEKLHELMLHNPKL 396
Query: 333 LTTG-ETRYKLPERLESYKL---ICESKLKPLYLVALLQSLG--EEKCIVFTSSVESTHR 386
+T G E Y +P+ L+ + + +S KPL L+ LL +L + + +VF S +++ R
Sbjct: 397 ITMGTEKLYNMPKLLQEFNIPIPTAKSHKKPLILLRLLSTLQAPDLRVLVFVKSNDASIR 456
Query: 387 LCTLLN-----HFGELRIKIKEYSGLQRQSVRSKTLKAF-----REGKIQVLVSSDAMTR 436
L +LL H G I++ + +++ K + +F ++ +VL+S+D M+R
Sbjct: 457 LSSLLQIMINRHLGTDSIEVASINNNNSKALNKKLISSFSKPNSQQKTTKVLISTDLMSR 516
Query: 437 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
G+D+ + +V+NYD P + Y+HR GRTARA G +L
Sbjct: 517 GIDIINITHVINYDLPVSSQQYVHRCGRTARAHTHGSALNIL 558
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
D+ +N+ TGSGKTL+Y++PIV LS R V LRA++++PT+ L QV
Sbjct: 225 DILVNASTGSGKTLAYSIPIVHILSKRIVNRLRAIILVPTKLLIQQV 271
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 184/448 (41%), Gaps = 112/448 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G+ PVQ A + L +D+ + TGSGKT ++ALPI+Q L
Sbjct: 67 ACKELGMRHPTPVQRACVPQI----LKGKDVLGMAQTGSGKTAAFALPILQRLGENPYGI 122
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
ALV+ PTR+LA Q++ D F
Sbjct: 123 F-ALVMTPTRELAFQIS---------------------------------------DQFK 142
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ V L + VG + + L++RP +++ATPGR
Sbjct: 143 ALGAGVHLRCAVVVGGMDMTTQAQILMERPH---------------------VVIATPGR 181
Query: 222 LMDHINATRGFT--LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
+ HI + +LV+DE D LL +Q L T+
Sbjct: 182 IKAHIGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTI------------------- 222
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
F + R+ ++ SAT+T D L L H F E
Sbjct: 223 ---FDGISKQRQT----------------LLFSATMTGDLQALRDLFGHRAFFYQAYEG- 262
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSLGEE---KCIVFTSSVESTHRLCTLLNHFGE 396
K E L+ + K+K +YL LL++L E I+F S + H L +L+ E
Sbjct: 263 LKTVESLDQRYIFMPGKVKNVYLTYLLENLELEDIRSVIIFVSRCRTCHLLSLILD---E 319
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L I ++ Q R L F+ G+ +L+++D +RG+D+ V+ VVNYD P + K
Sbjct: 320 LGISAVALHSVKTQPQRLAALNQFKSGQATILIATDVASRGLDIPTVDLVVNYDIPRFTK 379
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK 484
Y+HR GRTARAG+ GR +L+ + +V+
Sbjct: 380 DYVHRVGRTARAGRGGRAISLVTELDVE 407
>gi|254572509|ref|XP_002493364.1| Essential protein involved in ribosome biogenesis [Komagataella
pastoris GS115]
gi|238033162|emb|CAY71185.1| Essential protein involved in ribosome biogenesis [Komagataella
pastoris GS115]
gi|328352620|emb|CCA39018.1| hypothetical protein PP7435_Chr3-0044 [Komagataella pastoris CBS
7435]
Length = 721
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 149/320 (46%), Gaps = 51/320 (15%)
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
EL + DI+V+TPGRL++H+NA R L L +LVVDE DR+L W +L+ +
Sbjct: 352 ELPNYPDIIVSTPGRLLEHLNANR-LKLHCLRFLVVDEADRILHSTSFDWCAPLLRKINN 410
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
D + + L + S+ + K+V SATLT D KL+ L
Sbjct: 411 DRSTSYGKSGKSLSALNLSVVPCQ-----------------KLVFSATLTTDAEKLSHLQ 453
Query: 327 LHHPLFLTTGE-----------TRYKLPERLESYKLICESK-----LKPLYLVALLQS-- 368
L+ P L + Y+LP L+ L + KPL L LL
Sbjct: 454 LYRPRLLVVNDHGVESGKDGSSELYQLPPSLDELSLTLSNTDGVEFFKPLILFKLLTEYV 513
Query: 369 ----LGE--------EKCIVFTSSVESTHRLCTLLNHFGEL---RIKIKEYSGLQRQSVR 413
+G+ +VF S E++ R+ LL+ E ++++K + L R
Sbjct: 514 YRARMGDMNVSVPFKANVLVFIRSNEASARMEKLLDLLAEAFRKKLRVKSVNSLLDPETR 573
Query: 414 SKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGR 473
+ F KI VLV++D M RGMD+ +N+V+NYD P + Y+HR GRTARA + G
Sbjct: 574 ERRFHDFTRNKIDVLVATDVMARGMDLPNINHVINYDLPGSTREYVHRVGRTARANKFGV 633
Query: 474 CFTLLHKDEVKRFKKLLQKA 493
+ + D +++ + L ++
Sbjct: 634 ATSFVLGDGDRQWLRRLTQS 653
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ-------ETIG 64
+ W+ P+ + P L LK LQ G F VQ++V Q +T
Sbjct: 206 IDWLAKPIYYTTRATLPFQKLNLPPSLLKNILQKFGYKEAFSVQISVIQALQHDIKQTRI 265
Query: 65 PGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
DL N+PTGSGKTL Y +PIVQ + R V ++ +++ PT+ L QV S +
Sbjct: 266 SNSIPGDLLANAPTGSGKTLGYCVPIVQAILGRRVSSIKCIILAPTKPLVSQVYSTLNQL 325
Query: 125 CC 126
C
Sbjct: 326 CT 327
>gi|323454376|gb|EGB10246.1| hypothetical protein AURANDRAFT_23571, partial [Aureococcus
anophagefferens]
Length = 545
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 191/466 (40%), Gaps = 115/466 (24%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC--------LR 103
F A+ + + L RD+C ++ TGSGKT ++ LP+++ R VR +R
Sbjct: 71 FSRPTAIQERVVPLALAGRDVCASAATGSGKTAAFGLPLLE----RVVRAKAAHGKPTIR 126
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
+++LPTR+LA Q C + + GL QF
Sbjct: 127 GVILLPTRELAAQ--------CEEMVRGL----------GQFS----------------- 151
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
G V L VG + ++ EL R K P D++VATPGRL+
Sbjct: 152 ----GADVALVVGGAKDV-KVQELALRRK--------P-----------DVVVATPGRLL 187
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ RG L+ + V+DE DRLL ++ L +L LP
Sbjct: 188 DHLTNGRGVHLDDVECCVLDEADRLLELGFEDELRQLL---------------GALPG-- 230
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL------TTGE 337
G ERG + M+ SAT LA L L P+ + G
Sbjct: 231 ---------GSERGKGGRGSGTRQTMLFSATFGAKVESLAALSLVRPVRVRVASGHGAGG 281
Query: 338 TRYKLPE---RLESYKLICESKLKPLYLVALLQSLGE--EKCIVFTSSVESTHRLCTLLN 392
KL + RL++ + E + L+ALL + + +VF + +T R+ LL
Sbjct: 282 VAAKLTQDFVRLKAAEGRAEDAEREATLLALLTRTVDPASQAVVFFDTKAATRRVGALLE 341
Query: 393 HF-------GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
G E G RQ+ R L F G +L+ +D RG+D+ GV
Sbjct: 342 ALRARGGLSGHALPPATELHGGLRQAQRDANLARFERGDAGILLCTDVAARGLDLAGVGA 401
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
VVN++ P + TY+HR GRTARAG+ G TL+ + K+ L+
Sbjct: 402 VVNFEMPRTVATYVHRVGRTARAGRSGHAVTLVGPQRRQALKEFLR 447
>gi|260433500|ref|ZP_05787471.1| putative ATP-dependent RNA helicase RhlE [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417328|gb|EEX10587.1| putative ATP-dependent RNA helicase RhlE [Silicibacter
lacuscaerulensis ITI-1157]
Length = 476
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 215/502 (42%), Gaps = 131/502 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P++ A++ G + P+Q + I P L RD+ + TG+GKT S+ LP++ L
Sbjct: 9 LNPKVLKAIEEAGYETPTPIQ----EGAIPPALEGRDVLGIAQTGTGKTASFVLPMITLL 64
Query: 95 S-NRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ RA R R+LV+ PTR+LA
Sbjct: 65 ARGRARARMPRSLVLCPTRELAA------------------------------------- 87
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
QV + F + L+ L +G G+ + +D L + V
Sbjct: 88 --QVAENFDTYTKHLKLTKALLIG-------------------GVSFKEQDAL--IDRGV 124
Query: 213 DILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
D+L+ATPGRL+DH RG L + +VVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFE--RGKLLLTGVQIMVVDEADRMLDMG------------------- 163
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
F+P +ER F P+ R + SAT+ + ++ L P
Sbjct: 164 ------FIPD------------IERIFSLTPFTRQT-LFFSATMAPEIERITDTFLSAPA 204
Query: 332 FL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC---IVFTSSVE 382
+ T ET + ++ + E K L AL+ + G+ KC I+F +
Sbjct: 205 RIEVARQATASETIEQGVVMIKGGRRDREGSTKRKVLRALIDAEGD-KCTNAIIFCNRKT 263
Query: 383 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 442
L +G I G QSVR++TL+ FREG ++ LV+SD RG+DV
Sbjct: 264 DVDITAKSLKKYGYDAAAI---HGDLDQSVRTRTLEGFREGSLRFLVASDVAARGLDVPS 320
Query: 443 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDE--VKRFKKLLQKA----DN 495
V++V N+D P++ + Y+HR GRT RAG+ G+ TL +DE ++ +KL+QK DN
Sbjct: 321 VSHVFNFDVPSHPEDYVHRIGRTGRAGREGKAITLCTARDEKALEAIEKLIQKEIPRLDN 380
Query: 496 DSCPIHSIPSSLIESLRPVYKS 517
P+ + P+ E +P KS
Sbjct: 381 ---PVEAEPAE-AEDKKPEKKS 398
>gi|21228658|ref|NP_634580.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
gi|20907159|gb|AAM32252.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
Length = 429
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 207/461 (44%), Gaps = 111/461 (24%)
Query: 40 KVALQNMGISSL----FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
K+ L N + S+ F A+ +++I L D+ + TGSGKTLS+A I+Q +
Sbjct: 33 KLGLSNAVLKSIDEHGFESPTAIQEKSIPLILAGEDVIGGAATGSGKTLSFASGILQ--N 90
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
+ + ++AL++ PTR+LA QV ++ K+ ++D L
Sbjct: 91 SEKGKGIQALILTPTRELAEQVANSLRKFS------------------KYDPL------- 125
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
A+I VG++ + +EL++A +++
Sbjct: 126 ---NIASIYGGVGINTQI--------------------------------KELKNA-EVV 149
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
V TPGRL+DHI + L ++ LV+DE D + +
Sbjct: 150 VGTPGRLLDHI-SRNTIKLNNVKTLVLDEADHMFDMGF---------------------- 186
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
+ VE+ K+ P R ++ SAT+T+D +L++ + +P+ ++T
Sbjct: 187 ---------------KVDVEKIIKECPQNRQT-LLFSATITKDIVRLSRKYMENPVRVST 230
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
Y P++L + +K LV LLQ+ +VF ++ +T ++ L
Sbjct: 231 --ESYIDPQKLNQVVYKVQDDMKLSLLVYLLQNEKSNLGMVFCNTKRNTDKVAKNLRKSS 288
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+ I + GL Q+ R++ L+ F G I VLV +D RG+D++GV++V NYD P
Sbjct: 289 INAVAI--HGGLT-QNERTRILEKFHSGNIGVLVCTDVAGRGLDIQGVSHVYNYDIPRES 345
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADND 496
K YIHR GRTARAG G+ +L K++ F +L+ D D
Sbjct: 346 KQYIHRIGRTARAGTEGKAINILSKNDHANFMSVLKDNDVD 386
>gi|346972935|gb|EGY16387.1| ATP-dependent RNA helicase dbp6 [Verticillium dahliae VdLs.17]
Length = 775
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 167/355 (47%), Gaps = 53/355 (14%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
PW+ +P+ V+ P + D K+ L++ G F VQ A + P R
Sbjct: 197 PWLAAPIRVAADTRTPFPEIGINDRSAKI-LESKGFKDAFAVQTAAIPLLL-PSCKHRQG 254
Query: 71 DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY-CCKNI 129
DL + + TGSGKTL+YALPIV+ +S V LRALVVLPTR+L VN A+ + C
Sbjct: 255 DLLVAAATGSGKTLAYALPIVRDISQGQVTRLRALVVLPTREL---VNQAQEVFQLCAAA 311
Query: 130 FGLIADH------SIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
F SI ++ D + + D A A AV +++ D
Sbjct: 312 FDARDQKRVRIGISIGSHQLKNDQANLVEQTERYDP-EAYADAVKRD---REAWTTLEDA 367
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
+E P+ + + D + + S VD+L+ TPGRL+DHIN T GFTL+++ +LVVD
Sbjct: 368 DAE--GGPQASRPVMGNLPDHVVDYNSKVDVLICTPGRLVDHINHTPGFTLDYVRWLVVD 425
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E D+LL +++Q WL V+ R+ N+FS R F D
Sbjct: 426 EADKLLAQSFQGWLDVVMPKLRT---NKFS---------------------ARDFPDSNL 461
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFL---------TTGETRYKLPERLESY 349
+ K+VLSATLT+D + L L L P + TT + LP L+ +
Sbjct: 462 TGVRKVVLSATLTRDLSLLGSLQLRRPQLIVLEGGKADGTTQVAEHTLPSSLKEF 516
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%)
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
I + Q+ S R + L +F G +++LV+SD + RG+D+ ++NVVNYD PA Y+H
Sbjct: 633 IGTLTSTQKTSHRRRVLASFTTGTLRILVASDLVARGIDLPALDNVVNYDLPASAAGYVH 692
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
R GRTARAG+ GR FTL+ E F + K
Sbjct: 693 RVGRTARAGRQGRAFTLVETRESGWFWGAVAK 724
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 173/404 (42%), Gaps = 105/404 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 50 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 106
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 107 LAFQIS---------------------------------------EQFEALGSSIGVQCA 127
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 128 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 166
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 167 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 206
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 207 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 247
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 248 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH---GQMSQSK 304
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K
Sbjct: 305 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 348
>gi|333991566|ref|YP_004524180.1| ATP-dependent RNA helicase RhlE [Mycobacterium sp. JDM601]
gi|333487534|gb|AEF36926.1| ATP-dependent RNA helicase RhlE [Mycobacterium sp. JDM601]
Length = 508
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 193/469 (41%), Gaps = 119/469 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
AL GI F +Q + T+ L DL + TG GKT + +P++Q +S R
Sbjct: 28 ALAEDGIERAFAIQ----ELTLPLALAGDDLIGQARTGMGKTYGFGVPLLQRVSTSTDRP 83
Query: 102 L----RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
L RALVV+PTR+L C + G +AD A+ D L +
Sbjct: 84 LTGIPRALVVVPTREL------------CIQVSGDLAD--AAKYLTAGDRPLSVQ----- 124
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
+ G Y+P+ ++ LQ+ D++V
Sbjct: 125 ----------------------------------AIYGGRPYEPQ--IEALQAGADVVVG 148
Query: 218 TPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
TPGRL+D A +G L L LV+DE D +L
Sbjct: 149 TPGRLLDL--AQQGHLQLGGLTVLVLDEADEMLDLG------------------------ 182
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
FLP +ER P R M+ SAT+ LA+ ++ P +
Sbjct: 183 -FLPD------------IERILARIPDDRQ-SMLFSATMPGPIITLARSFMNQPTHI--- 225
Query: 337 ETRYKLP------ERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
R + P + E + + K + +LQ+ G ++FT + + ++
Sbjct: 226 --RAEAPHSSAVHDATEQFVYRAHALDKAELVARVLQARGRGATMIFTRTKRTAQKVA-- 281
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
+ GE K+ G Q R K LKAFR G I VLV++D RG+D++ V +VVNY
Sbjct: 282 -DDLGERGFKVGAVHGDLNQVAREKALKAFRTGDIDVLVATDVAARGIDIDDVTHVVNYQ 340
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCP 499
P KTY+HR GRT RAG+ G TL+ DE+ R+ ++ KA N CP
Sbjct: 341 CPDDEKTYVHRIGRTGRAGKTGVAVTLVDWDELARW-SMIDKALNLQCP 388
>gi|156086188|ref|XP_001610503.1| DEAD/DEAH box helicase family protein [Babesia bovis T2Bo]
gi|154797756|gb|EDO06935.1| DEAD/DEAH box helicase family protein [Babesia bovis]
Length = 497
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 197/477 (41%), Gaps = 118/477 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFER------DLCINSPTGSGKTLSYALPI 90
P L + L+ GI+ LFPVQ V I + +R D+ I +PTG G
Sbjct: 44 PHLLLLLERHGITDLFPVQKQVIPWLINCDVLDRFSSSACDIVITAPTGQG--------- 94
Query: 91 VQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLF 150
R L AL++ PTR+L Q + C F
Sbjct: 95 ---------RGLCALILAPTRELVKQT---------------------YDFCTWF----- 119
Query: 151 ISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 210
L V+ + L L G +S D+ + L L+
Sbjct: 120 --LEDDASVYD-LKGGTLLRAHLCYGSTSFVDDHTYL--------------------LEH 156
Query: 211 AVDILVATPGRLMDHIN---ATRGFTLEH--LCYLVVDETDRLLREAYQAWLPTVLQLTR 265
+ I++ TPGR ++H N ++ G L++ + ++V+DE D LL ++Y W V ++R
Sbjct: 157 SPQIVLFTPGRFVEHYNHRNSSCGKILDYSSIRWMVIDEVDMLLSQSYFNWTSVVTSISR 216
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
E + + L ++F P R K+++SAT+ P K A++
Sbjct: 217 ECQEKQ-----SLLDTSF------------------PVVRPQKILVSATI---PTKSAEI 250
Query: 326 DL---HHPLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSL-----GEEKCIV 376
DL + PL + + + Y LP L + + KPL L LL + +K IV
Sbjct: 251 DLIQLNRPLLMKSRSQALYSLPANLTQWYIKTTKNNKPLVLAKLLLHIMANGSTGDKTIV 310
Query: 377 FTSSVESTHRLCTLLN----HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
F S ++ H + +L H G ++ E S Q R + FR+G LV SD
Sbjct: 311 FCSYRQTAHAMVRMLELFSIHTGH-NLRSLELSASLSQKQRHDVVDMFRKGDSFCLVCSD 369
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+RGM+ NV+NYD P I YIHR GRTARA + G + LL +V F+K
Sbjct: 370 VASRGMNFSNTRNVINYDFPTSIAKYIHRIGRTARAYESGNSYILLTGQQVVGFQKF 426
>gi|126727175|ref|ZP_01743012.1| ATP-dependent RNA helicase RhlE [Rhodobacterales bacterium
HTCC2150]
gi|126703603|gb|EBA02699.1| ATP-dependent RNA helicase RhlE [Rhodobacterales bacterium
HTCC2150]
Length = 574
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 196/470 (41%), Gaps = 130/470 (27%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
LDP++ A+ G S P+Q I P L +D+ + TG+GKT S+ LP++
Sbjct: 8 SLDPKVLKAVAETGYESPTPIQAGA----IPPALEGKDVLGIAQTGTGKTASFTLPMISL 63
Query: 94 LS-NRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFI 151
LS RA R R+LV+ PTR+LA Q
Sbjct: 64 LSKGRARARMPRSLVLAPTRELAAQ----------------------------------- 88
Query: 152 SLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 211
V + F A + L+ L +G G+ + +D L +
Sbjct: 89 ----VAENFDAYSKYSKLTKALLIG-------------------GVSFKEQDKL--IDRG 123
Query: 212 VDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 270
VD+L+ATPGRL+DH+ RG L + +VVDE DR+L
Sbjct: 124 VDVLIATPGRLLDHVE--RGKLLLTGVQIMVVDEADRMLDMG------------------ 163
Query: 271 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 330
F+P +ER FK P+ R + SAT+ + ++ L P
Sbjct: 164 -------FIPD------------IERIFKLTPFTRQT-LFFSATMAPEIERITNTFLSAP 203
Query: 331 LFL------TTGETR-----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKC---IV 376
+ + TT ET + P+R E +K K L A +++ GE KC I+
Sbjct: 204 VKVEVARAATTSETITQGLIWHEPKRRE-----FGAKDKRNILRATIEAEGE-KCTNAII 257
Query: 377 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 436
F + + L G + G QS R K L FREG+I+ L +SD R
Sbjct: 258 FCNRKVEVDIVAKSLKKHG---YNAEPIHGDLDQSHRMKVLNGFREGEIRFLCASDVAAR 314
Query: 437 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
G+D+ V++V N+D P + + Y+HR GRT RAG+ G FT+ ++ K+
Sbjct: 315 GLDIPNVSHVFNFDVPGHAEDYVHRIGRTGRAGRTGTAFTIATPNDAKQL 364
>gi|407645090|ref|YP_006808849.1| RNA helicase [Nocardia brasiliensis ATCC 700358]
gi|407307974|gb|AFU01875.1| RNA helicase [Nocardia brasiliensis ATCC 700358]
Length = 580
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 199/475 (41%), Gaps = 118/475 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
AL+ GI + FP+Q A T+ L +D+ PTGSGKTL++ LP++ L+ A +
Sbjct: 27 ALRRDGIEAPFPIQAA----TVPDALAGKDVLGRGPTGSGKTLAFGLPMLARLAGAASQP 82
Query: 102 LR--ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R LV++PTR+LA Q+ A
Sbjct: 83 GRPRGLVLVPTRELAAQIERA--------------------------------------- 103
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
A A A+GL V VG + I + L + VD+L+ATP
Sbjct: 104 LDAPALALGLRVASVVGGAPIKRQADRLAR---------------------GVDLLIATP 142
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL D + R +L + +DE D + A +LP V +L + D L
Sbjct: 143 GRLADLV-MQRSASLADVRITALDEADHM---ADMGFLPQVTKLL----DQTPKDGQRLL 194
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD---PNKLAQLDLHHPLFLTTG 336
SA T+ D +LVK L + +T P HH LF+
Sbjct: 195 FSA-----TL----------DGEVDKLVKRYLRSPVTHSTAPPAASVATMTHHLLFV--- 236
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
R KL +R + ++ L I+F + RL L G
Sbjct: 237 --RDKLAKRAVASEIAAREGL----------------TIMFVRTKHGADRLAKQLRGVG- 277
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I G + Q+ R++TL AF +G + VLV++D RG+ V+G++ VV+ D PA K
Sbjct: 278 --IPAGALHGGKAQNNRTRTLAAFADGSVPVLVTTDVAARGIHVDGISLVVHVDPPAESK 335
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS--SLIE 509
Y+HRAGRTARAG+ G TL+ +E + + + +KA D I P +LIE
Sbjct: 336 AYLHRAGRTARAGEDGVVVTLVMDEERRDVESMTRKAGVDIKGIAVRPGDRTLIE 390
>gi|301112795|ref|XP_002998168.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262112462|gb|EEY70514.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 823
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 201/471 (42%), Gaps = 104/471 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-SNRAVR 100
A++++G P+Q+ + I GL +RD+ + TGSGKT ++ +PI+ + S A
Sbjct: 373 AIKDLGFERPSPIQM----QAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPATM 428
Query: 101 CLR-------ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
R ALV+ PTR+LALQ+ K C GL
Sbjct: 429 VARTGEQGPLALVMAPTRELALQIEQEAIKLCKHTSVGL--------------------- 467
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
P+ + P LSV VG SI D+ G L+ V+
Sbjct: 468 PE------KMNPIKTLSV---VGGQSIEDQ------------GF---------RLREGVE 497
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ----LTRSDNE 269
I++ TPGRLMD + + L Y+V+DE DR++ ++ + VL+ L +S+NE
Sbjct: 498 IIIGTPGRLMDCLE-SHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENE 556
Query: 270 NRFSDASTFLPSA-FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 328
T A G + R V + SAT+ + +LA+ L
Sbjct: 557 EEMEQQLTLANRAQLGEFQHRLR---------------VTTMFSATMPVEVERLAKTFLR 601
Query: 329 HPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL-----------------GE 371
HP + G+ +R+E + K LV +L+ +
Sbjct: 602 HPSIVKIGDEDSGKNKRIEQRVMFMNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDG 661
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
K IVF + + + ++ G R I G + Q R ++LK FREG +LV++
Sbjct: 662 AKIIVFVNIKKECDSVAKFISSEG-FRCTI--LHGGKTQDQREESLKMFREGYCDMLVAT 718
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 482
D RG+D+ V +VVN+D P+ I+ Y HR GRT RAG+ G +LL D+
Sbjct: 719 DVAGRGLDIPDVTHVVNFDLPSKIQNYSHRIGRTGRAGKDGVAISLLTDDD 769
>gi|348672465|gb|EGZ12285.1| hypothetical protein PHYSODRAFT_361512 [Phytophthora sojae]
Length = 836
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 202/473 (42%), Gaps = 107/473 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQ--------T 93
A++++G P+Q+ + I GL +RD+ + TGSGKT ++ +PI+
Sbjct: 385 AIKDLGFERPSPIQM----QAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPPAM 440
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
++ + ALV+ PTR+LALQ+ K C + S+
Sbjct: 441 VARTGEQGPLALVMAPTRELALQIEQEAIKLCK-----------------------YTSV 477
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
Q + + P LSV VG SI D+ G L+ VD
Sbjct: 478 GQPE----KLGPIKTLSV---VGGQSIEDQ------------GF---------RLREGVD 509
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ----LTRSDNE 269
I++ TPGRLMD + + L Y+V+DE DR++ ++ + VL+ L +S+NE
Sbjct: 510 IIIGTPGRLMDCLE-SHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENE 568
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
T A + R V + SAT+ + +LA+ L H
Sbjct: 569 EEMEQQLTLANGAQPGEELQHRL-------------RVTTMFSATMPVEVERLAKTFLRH 615
Query: 330 P--------------------LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSL 369
P LF+ G+ R KL +E + I ++ PL + +
Sbjct: 616 PSIVKIGDEDSGKNKRIDQRVLFMNPGKKRSKL---VEVLRDILSAQSVPLPRSRKEKVV 672
Query: 370 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 429
K IVF + + + ++ G R I G + Q R ++LK FREG +LV
Sbjct: 673 DGAKIIVFVNIKKECDSVAKFISSEG-FRCTI--LHGGKTQDQREESLKMFREGYCDMLV 729
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 482
++D RG+D+ V +VVN+D P+ I+ Y HR GRT RAG+ G + L D+
Sbjct: 730 ATDVAGRGLDIPDVTHVVNFDLPSKIQNYTHRIGRTGRAGKDGVAISFLTDDD 782
>gi|282599579|ref|ZP_05971084.2| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
gi|282568585|gb|EFB74120.1| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
Length = 457
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 204/480 (42%), Gaps = 123/480 (25%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L+ + A+ +G S P+Q Q+ I L DL ++ TG+GKT + LPI+Q
Sbjct: 15 ALNEEILRAINELGYDSPTPIQ----QQAIPAVLAGNDLLASAQTGTGKTAGFTLPILQK 70
Query: 94 L-----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSL 148
L S R +RAL++ PTR+LA QV ++ E +
Sbjct: 71 LVDAPRSGNNRRPIRALILTPTRELAAQV-----------------AENVKEYSRHLNIR 113
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
F+ VF + SI ++ KL +G+ DVL
Sbjct: 114 SFV-------VFGGV---------------SINPQMM------KLRSGV-----DVL--- 137
Query: 209 QSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
+ATPGRL+D H NA L + LV+DE DR+L
Sbjct: 138 -------IATPGRLLDLEHQNA---VDLSQVEILVLDEADRML----------------- 170
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
G + IRR P R ++ SAT + D +LA
Sbjct: 171 ---------------DMGFIHDIRRV-----ITKLPKKRQ-NLLFSATFSDDIKQLASKL 209
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
L++P+ + R E++ Y + + K K L ++ ++ +VFT + +R
Sbjct: 210 LNNPVSIEVA-PRNSASEQVTQYVHLVDKKRKAELLSFMIGRENWQQVLVFTRTKHGANR 268
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LN G IK G + Q R++ L F+ G I+VLV++D RG+D+E + +V
Sbjct: 269 LAEHLNKDG---IKSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEQLPHV 325
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK---KLLQKADNDSCPIHSI 503
VN++ P + Y+HR GRT RA G+ +L+ DEVK K KLL+K S P+ +I
Sbjct: 326 VNFELPNVAEDYVHRIGRTGRAEATGQAISLVCIDEVKLLKDIEKLLKK----SIPVMAI 381
>gi|281202503|gb|EFA76705.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1173
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 179/438 (40%), Gaps = 103/438 (23%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + TI L RD+ ++ TG GKT ++ALPI+ LS A+V+ PTR
Sbjct: 680 FKAPSNIQYNTIPAILSGRDILASAKTGQGKTAAFALPILSALSEDPYGIF-AVVLTPTR 738
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA+Q+ F A+ A+ ++
Sbjct: 739 ELAVQIGEQ---------------------------------------FRALGSAINVNC 759
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ +G + L KRP I+VATPGRL H+N
Sbjct: 760 CVVIGGIDNVQQSLILDKRPH---------------------IIVATPGRLAAHLNNGMK 798
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
L+ +LV+DE DR+L ++ + +++ LP
Sbjct: 799 LALQFCRFLVLDEADRMLGPDFELEVQKIVE---------------HLP----------- 832
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
P++ ++ SAT+T KL + + +P ++ +Y E L Y +
Sbjct: 833 ------------PKIQTLLYSATMTNSNKKLESIPIKNP-YIFEDNNKYDTVETLSQYYV 879
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
++ K +LV LL+ IVF ++ + + +LN +L IK Q
Sbjct: 880 FMPAQAKDCHLVYLLKKHDSSSVIVFINNCRTVEAVKGMLN---KLDIKSVSLHSFLSQK 936
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R LK F+ GKI+VL+++D +RG+D+ V V+NY K YIHR GRTAR G+
Sbjct: 937 DRLNALKQFKSGKIRVLIATDVASRGLDIPDVQMVINYKLSNSSKDYIHRVGRTARFGRS 996
Query: 472 GRCFTLLHKDEVKRFKKL 489
GR + + +V+ K +
Sbjct: 997 GRAISFVTPHDVELVKNV 1014
>gi|45361669|ref|NP_989409.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
gi|40787696|gb|AAH64887.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
Length = 479
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 189/446 (42%), Gaps = 114/446 (25%)
Query: 45 NMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCL 102
+GI PVQ + I P L RD + TGSGKT ++ LPI+Q LS + CL
Sbjct: 19 QLGILKPSPVQ----ENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPFGIFCL 74
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
V+ PTR+LA Q IAE F
Sbjct: 75 ---VLTPTRELAYQ---------------------IAEQ------------------FRV 92
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
+ +GL + VG + + EL ++P +++ATPGRL
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPH---------------------VVIATPGRL 131
Query: 223 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 282
DHI ++ F+++ + +LV+DE DRLL + + D L +
Sbjct: 132 ADHIRSSNTFSIKKIRFLVLDEADRLLEQGCTDFT---------------QDLQVILEAV 176
Query: 283 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYK 341
+T ++ SATLT +L + ++ P F +T E R
Sbjct: 177 PAQRQT--------------------LLFSATLTDTLQELKTIAMNKPFFWESTSEVRT- 215
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGEL 397
E+L+ ++ K+K YLV L+Q +E ++FT++ ++ L +L F
Sbjct: 216 -VEQLDQRYILVPEKVKDAYLVHLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFP 274
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ + + +Q R L F+ ++L+++D RG+D+ V V+N++ P K
Sbjct: 275 SVAL---HSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKI 331
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEV 483
YIHR GRTARAG+ G TL+ + ++
Sbjct: 332 YIHRVGRTARAGRNGMAITLVTQYDI 357
>gi|307173483|gb|EFN64393.1| Probable ATP-dependent RNA helicase DDX27 [Camponotus floridanus]
Length = 694
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 219/492 (44%), Gaps = 118/492 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ M P+Q A TI L RD+C + TG+GKT +Y LP ++ L
Sbjct: 124 PLLK-AITAMNFIQPTPIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLY 178
Query: 97 RAVR---CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
R + R LV++PTR+L +QV + + + QF ++
Sbjct: 179 RPLDGPAVSRVLVLVPTRELGVQV------------------YQVTKQLTQFTTV----- 215
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
VGL+VG + + S L K P D
Sbjct: 216 ----------------EVGLSVGGLDVKVQESVLRKNP---------------------D 238
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+N F+L ++ L++DE DR+L E + + +
Sbjct: 239 IVIATPGRLIDHLNNAPTFSLNNIEVLILDEADRMLDEYFAEQMKYI------------- 285
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
+++C + ++ SAT+T++ LA + L++P+ +
Sbjct: 286 ---------------VKQCARTKQT----------ILFSATMTEEVKDLAAVSLNNPIKI 320
Query: 334 ---TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + + L + + E + + L AL+ + ++F + + HRL L
Sbjct: 321 FVDSNQDVAFNLRQEFIRIRKEREGDREAI-LAALVCRTFHDHTMIFVQTKKQAHRLHIL 379
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L L +K+ E G Q R + L+ F+E +I +L+++D RG+D+ GV V+N+
Sbjct: 380 LGL---LGLKVGELHGNLTQPQRLENLQKFKEEEIDILLATDVAARGLDISGVKTVINFM 436
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 508
PA ++ YIHR GRTARAG+ G +L + E K+++++A N PI + IP +I
Sbjct: 437 MPATLQHYIHRVGRTARAGRGGVSVSLAGEQERFLVKEIIKQAKN---PIKNRIIPPDII 493
Query: 509 ESLRPVYKSGDV 520
E +S +V
Sbjct: 494 EKYNKKLQSLEV 505
>gi|46108158|ref|XP_381137.1| hypothetical protein FG00961.1 [Gibberella zeae PH-1]
Length = 906
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 159/334 (47%), Gaps = 51/334 (15%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---ETIGPGLFE 69
PW+ P+ VS P L L P+ L+ G F VQ A T PG
Sbjct: 334 PWLAKPLRVSQDTRTPFSELDIL-PKACRVLEEKGFQDAFAVQTAAIPLLLPTSRPG--- 389
Query: 70 RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNI 129
D+C+++ TGSGKTL+Y LPI + +S + LRALVVLPTR+L Q + C +
Sbjct: 390 -DVCVSAATGSGKTLAYTLPITRDISQGCLTRLRALVVLPTRELVKQAQET-FELCARAF 447
Query: 130 FGLIADHSIAEMCVQFDSLLFISLPQV---------KDVFAAIAPAVGLSVGLAVGQSSI 180
G +D + V S F + + + + V L +G S+
Sbjct: 448 DG--SDRKRVRVGVSVGSQSFEDEQKAFMEQELRYDPEAYKKLQDEVQQQNQLKLGLSTT 505
Query: 181 ADEISELIKR-PKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
D + +L P+L + Y + +L S +D+L+ TPGRL++H+ T GF+L+++ +
Sbjct: 506 -DSLDDLEDTDPRLSSKNGY-----VVDLLSKIDVLICTPGRLVEHMEQTPGFSLDYVRW 559
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LVVDE D+LL +++Q WL V++ R P+A R F
Sbjct: 560 LVVDEADKLLAQSFQGWLDVVMEKFRVSK-----------PTA-------------RDFP 595
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
D + + K++LSATLT+D + L QL LH P +
Sbjct: 596 DINFSGVRKIILSATLTRDLSLLNQLGLHRPQMI 629
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 412 VRSKTLKAFR--EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
+R KTL+AF I++LV+SD ++RG+D+ +++V+NYD PA + Y+HR GRTARAG
Sbjct: 785 IRRKTLRAFSTPSSPIRLLVASDLVSRGIDLPNLDHVINYDMPASVAGYVHRVGRTARAG 844
Query: 470 QLGRCFTLLHKDEVKRFKKL 489
+ G +TL+ DE + K+
Sbjct: 845 KSGSAWTLVGDDESWFYNKI 864
>gi|335420259|ref|ZP_08551297.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
gi|334894618|gb|EGM32803.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
Length = 437
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 45/295 (15%)
Query: 195 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 254
G+ Y P+ + + + VDI+VATPGRL+D + L ++ LV+DE DR+L
Sbjct: 106 GGVGYQPQ--IAQFKKGVDIVVATPGRLLDLLQEGHA-DLSNIQTLVLDEADRMLD---- 158
Query: 255 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
G + I+R K P R ++ SAT
Sbjct: 159 ----------------------------MGFIHDIKRV-----LKYVPEKRQT-LLFSAT 184
Query: 315 LTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC 374
++D KLA LH P+ + R +R++ ++ E K L L++ G +
Sbjct: 185 FSKDIRKLASSLLHKPVEIDVA-PRNATADRIDQKVVMVEKPRKRAVLSHLIKENGWHQV 243
Query: 375 IVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
+VF + +RLC L G + G + Q+ R+K L+ F++GKIQVLV++D
Sbjct: 244 LVFARTKHGANRLCKQLESDG---LPSAALHGNKSQNARTKALEGFKDGKIQVLVATDIA 300
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
RG+D+E + +VVNY+ P + Y+HR GRT RAG+ G +L+ DE K K +
Sbjct: 301 ARGIDIESLPHVVNYELPNVSEDYVHRIGRTGRAGEAGEAVSLVGPDERKLLKDI 355
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 27 CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSY 86
P D L L P L A+ G S P+Q + I L +D+ + TG+GKT ++
Sbjct: 1 MPFDQL-GLAPSLLEAVAAAGYSEPTPIQA----KAIPAVLDGQDVLAAAQTGTGKTAAF 55
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKY 124
LP++ L +R + R LV+ PTR+LA QVN + Y
Sbjct: 56 TLPLLHKLGDRQEKKPRVLVLAPTRELAAQVNESVRTY 93
>gi|156740947|ref|YP_001431076.1| DEAD/DEAH box helicase [Roseiflexus castenholzii DSM 13941]
gi|156232275|gb|ABU57058.1| DEAD/DEAH box helicase domain protein [Roseiflexus castenholzii DSM
13941]
Length = 450
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 199/501 (39%), Gaps = 141/501 (28%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
P++ ++++G + P+Q ++ I L RD+ + TG+GKT ++ LPI+ L
Sbjct: 8 FHPQINAGIRDLGYHTPTPIQ----EQVIPHALAGRDVIGIAQTGTGKTAAFVLPILHHL 63
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+RA++V PTR+LA
Sbjct: 64 MRGPRGRVRAMIVTPTRELA---------------------------------------E 84
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q++ V A+ G I+ L G+ Y + +Q L+ V+I
Sbjct: 85 QIQGVIEALGKHTG-------------------IRSVTLYGGVGYQGQ--IQRLRRGVEI 123
Query: 215 LVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
V PGRL+DH+ RG TL+HL L +DE D++ +LP V ++
Sbjct: 124 AVVCPGRLLDHLE--RGTLTLDHLEVLTLDEADQMFD---MGFLPDVRRI---------- 168
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
+R VER M+ SAT+ LA+ L PL +
Sbjct: 169 ---------------LRLAPVER----------QTMLFSATMPDAVRSLAREALRDPLTV 203
Query: 334 TTGETR---------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 384
G + Y +PE LK L+ LL+ E ++FT +
Sbjct: 204 QIGRSAPVATVTHAIYPVPE-----------HLKTSLLIELLERTDAESVLIFTRTKHRA 252
Query: 385 HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
RL L G + G Q+ R L FR G+ Q+L ++D RG+DV ++
Sbjct: 253 QRLGDTLARLG---YRATSLHGNLSQNRRQAALDGFRSGRYQILTATDIAARGIDVARIS 309
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQKA-------- 493
+V+NYD P + Y HR GRT RA + G FTL+ + + V+ ++L+ +
Sbjct: 310 HVINYDMPQTAEAYTHRIGRTGRAARTGDAFTLVTRGDTAMVRAIERLIGEPLKREIVPG 369
Query: 494 --DNDSCPIHSIPSSLIESLR 512
N + P+H S + S R
Sbjct: 370 FDYNAAAPVHETRSDAVHSNR 390
>gi|254466325|ref|ZP_05079736.1| ATP-dependent RNA helicase RhlE [Rhodobacterales bacterium Y4I]
gi|206687233|gb|EDZ47715.1| ATP-dependent RNA helicase RhlE [Rhodobacterales bacterium Y4I]
Length = 467
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 201/472 (42%), Gaps = 121/472 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P++ A++ G + P+Q I P L RD+ + TG+GKT S+ LP++ L
Sbjct: 9 LNPKVLKAIEEAGYETPTPIQAGA----IPPALEGRDVLGIAQTGTGKTASFTLPMITLL 64
Query: 95 S-NRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ RA R R+LV+ PTR+LA QV FD+
Sbjct: 65 ARGRARARMPRSLVLCPTRELAAQV------------------------AENFDTY---- 96
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
A V L+ L +G G+ + +D L + V
Sbjct: 97 -----------AKHVKLTKALLIG-------------------GVSFKEQDAL--IDKGV 124
Query: 213 DILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
D+L+ATPGRL+DH RG L + +VVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFE--RGKLLLTGVQIMVVDEADRMLDMG------------------- 163
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
F+P +ER F P+ R + SAT+ + ++ L P
Sbjct: 164 ------FIPD------------IERIFSLTPFTRQT-LFFSATMAPEIERITNTFLSGPA 204
Query: 332 FL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE--KCIVFTSSVES 383
+ T ET + +++ + E K L AL+ G++ I+F +
Sbjct: 205 RIEVARQATASETIEQAVVQVKPSRRDREGSEKRTVLRALIDGEGDKLTNGIIFCNRKTD 264
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
L +G I G QS R++TL +FREG +++LV+SD RG+DV V
Sbjct: 265 VDICAKSLKKYGYDAAAI---HGDLDQSQRTRTLDSFREGSLRILVASDVAARGLDVPSV 321
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDE--VKRFKKLLQK 492
++V N+D P + + Y+HR GRT RAG+ G+ T+ +DE + +KL+QK
Sbjct: 322 SHVFNFDVPGHAEDYVHRIGRTGRAGREGKAITICTPRDEKALDAVEKLIQK 373
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 173/404 (42%), Gaps = 105/404 (25%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 43 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 99
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 100 LAFQIS---------------------------------------EQFEALGSSIGVQCA 120
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P +++ATPGRL+DH+ T+GF
Sbjct: 121 VIVGGIDSMSQSLALAKKPH---------------------VVIATPGRLIDHLENTKGF 159
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 160 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 199
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 200 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 240
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 241 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 297
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K
Sbjct: 298 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 341
>gi|29612573|gb|AAH49396.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 482
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 189/446 (42%), Gaps = 114/446 (25%)
Query: 45 NMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCL 102
+GI PVQ + I P L RD + TGSGKT ++ LPI+Q LS + CL
Sbjct: 22 QLGILKPSPVQ----ENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPFGIFCL 77
Query: 103 RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAA 162
V+ PTR+LA Q IAE F
Sbjct: 78 ---VLTPTRELAYQ---------------------IAEQ------------------FRV 95
Query: 163 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 222
+ +GL + +G + + EL ++P I++ATPGRL
Sbjct: 96 LGKPLGLKDCIIIGGMDMVAQALELSRKPH---------------------IVIATPGRL 134
Query: 223 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 282
DHI ++ F+++ + +LV+DE DRLL + + D L +
Sbjct: 135 ADHIRSSNTFSIKKIRFLVMDEADRLLEQGCTDFT---------------QDLQVILEAV 179
Query: 283 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYK 341
+T ++ SATLT +L + ++ P F +T E R
Sbjct: 180 PAQRQT--------------------LLFSATLTDTLQELKTVAMNKPFFWESTSEVRT- 218
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGEL 397
E+L+ ++ K+K YLV L+Q +E ++FT++ ++ L +L F
Sbjct: 219 -VEQLDQRYILVPEKVKDAYLVYLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFP 277
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+ + + +Q R L F+ ++L+++D RG+D+ V V+N++ P K
Sbjct: 278 SVAL---HSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKI 334
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEV 483
YIHR GRTARAG+ G TL+ + ++
Sbjct: 335 YIHRVGRTARAGRNGMAITLVTQYDI 360
>gi|328778605|ref|XP_001122266.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Apis
mellifera]
Length = 739
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 213/481 (44%), Gaps = 118/481 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK A+ M P+Q A TI L RD+C + TG+GKT +Y LP ++ L
Sbjct: 166 PLLK-AITAMNFVHPTPIQAA----TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLY 220
Query: 97 RAVR---CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
R + R LV++PTR+L +QV + + + QF ++
Sbjct: 221 RPLDGPAISRVLVLVPTRELGVQV------------------YQVTKQLSQFTTI----- 257
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
VGL+VG + + + L + P D
Sbjct: 258 ----------------EVGLSVGGLDVKAQEAVLRRNP---------------------D 280
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I++ATPGRL+DH+ T F+L+ + L++DE DR+L E + + +
Sbjct: 281 IVIATPGRLIDHLKNTPTFSLDSIEVLILDEADRMLDEYFAEQMKYI------------- 327
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL-- 331
+++C R ++ SAT+T++ LA + L+ P+
Sbjct: 328 ---------------VKQCSRSRQ----------TILFSATMTEEVKDLAAVSLNKPVKV 362
Query: 332 FLTTGE-TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
F+ + + + L + + E + + L AL+ + +VF V++ + L
Sbjct: 363 FIDSNQDVAFNLRQEFIRIRKEREGDREAI-LAALICRTFHDHVMVF---VQTKKQAHRL 418
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
G L IK+ E G Q R + L F+ +I +L+++D RG+D+ GV V+N+
Sbjct: 419 HILLGLLGIKVGELHGNLTQPQRLENLTKFKNEEIDILLATDVAARGLDISGVKTVINFV 478
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLI 508
PA ++ YIHR GRTARAG++G +L + E K++++ A N P+ + IPS +I
Sbjct: 479 MPATMQHYIHRVGRTARAGRVGVSVSLAGEQERSLVKEIIKNAKN---PVKNRIIPSDII 535
Query: 509 E 509
+
Sbjct: 536 D 536
>gi|67423403|dbj|BAD99522.1| VASA RNA helicase [Daphnia magna]
Length = 775
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 204/479 (42%), Gaps = 117/479 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L ++N G PVQ A +I L +RDL + TGSGKT +Y +P++ L
Sbjct: 350 LRPLLLQNIKNSGYIKPTPVQKA----SIAVILAKRDLIACAVTGSGKTAAYLVPVMNIL 405
Query: 95 SNRAVRCL--------RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
+ V ++V PTR+LA+Q++ CK+ ++
Sbjct: 406 LEQGVAGASHGMLQKPEVVIVAPTRELAIQIHREACKF-------------------SYN 446
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
S+L +V + G V +R L+AG
Sbjct: 447 SVL---------------KSVIIYGGTVVNH-----------QRSNLQAG---------- 470
Query: 207 ELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
+ILVAT GRL D ++ RG F + +L++DE DR+L + P + ++
Sbjct: 471 -----CNILVATAGRLKDFLD--RGIFDFTAVKFLILDEADRMLDMGFG---PDIEKMV- 519
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
+ T P K IRR + SAT + LA
Sbjct: 520 --------NHPTMPP------KGIRRV----------------CMFSATFPDEVQALAAT 549
Query: 326 DLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
+ +F+TTG P+ +E C + K L+ +LQ LG+ K IVF S ++
Sbjct: 550 YMEDYIFVTTGIVGGTNPD-VEQLFFQCSKRDKRTKLMEVLQDLGDAKTIVFVDSKKTAD 608
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
+ L + ++ G + QS R + L+ F+ G +LV+++ RG+D+ GVN
Sbjct: 609 FVAAFLCN---NNLQSTSIHGDRLQSQREQALRDFKNGVRNILVATNVAARGLDIAGVNY 665
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE----VKRFKKLLQKADNDSCPI 500
VVNYD P I+ Y+HR GRT R G +G+ + +++ V +F LL K++ D P
Sbjct: 666 VVNYDLPTDIEEYVHRVGRTGRVGNIGKSISFFDEEKDGPNVGKFVSLLTKSNADVPPF 724
>gi|56696327|ref|YP_166684.1| ATP-dependent RNA helicase RhlE [Ruegeria pomeroyi DSS-3]
gi|56678064|gb|AAV94730.1| ATP-dependent RNA helicase RhlE [Ruegeria pomeroyi DSS-3]
Length = 471
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 202/473 (42%), Gaps = 123/473 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P++ A++ G + P+Q I P L RD+ + TG+GKT S+ LP++ L
Sbjct: 9 LNPKVLKAIEEAGYETPTPIQAGA----IPPALEGRDVLGIAQTGTGKTASFTLPMITLL 64
Query: 95 S-NRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ RA R R+LV+ PTR+LA
Sbjct: 65 ARGRARARMPRSLVLCPTRELAA------------------------------------- 87
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
QV + F + L+ L +G G+ + +D L + V
Sbjct: 88 --QVAENFDTYTKHLKLTKALLIG-------------------GVSFKEQDAL--IDRGV 124
Query: 213 DILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
D+L+ATPGRL+DH RG L + +VVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFE--RGKLLLTGVQIMVVDEADRMLDMG------------------- 163
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
F+P +ER F P+ R + SAT+ + ++ L P
Sbjct: 164 ------FIPD------------IERIFSLTPFTRQT-LFFSATMAPEIERITNTFLSAPA 204
Query: 332 FL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKC---IVFTSSVE 382
+ T ET + + + E+ K L AL+ + GE KC I+F +
Sbjct: 205 RIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLRALIDAEGE-KCTNAIIFCNRKT 263
Query: 383 STHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEG 442
+ L +G I G QS R++TL FREGK+++LV+SD RG+DV
Sbjct: 264 DVDIVAKSLQKYGYDAAPI---HGDLDQSQRTRTLDGFREGKLRLLVASDVAARGLDVPS 320
Query: 443 VNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL-LHKDE--VKRFKKLLQK 492
V++V N+D P + + Y+HR GRT RAG+ G+ TL + +DE + +KL+QK
Sbjct: 321 VSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDEKALDAIEKLIQK 373
>gi|411010727|ref|ZP_11387056.1| ATP-dependent RNA helicase RhlE [Aeromonas aquariorum AAK1]
Length = 415
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 189/460 (41%), Gaps = 111/460 (24%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L PRL+ L +G + PVQ + I L RDL + TG+GKT ++ LP+++
Sbjct: 10 ALSPRLQQTLTELGYVAPTPVQASA----IPVILAGRDLMAGAQTGTGKTAAFVLPLLEQ 65
Query: 94 L----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
L ++ A R +RALV++PTR+LA+QV+ + +Y
Sbjct: 66 LLQHPTSDAPRPIRALVLVPTRELAVQVHESVTRY------------------------- 100
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
A L+ L G SIA ++ + L+
Sbjct: 101 --------------AKGTDLTSTLVYGGVSIAAQV---------------------EALK 125
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
+ VD+L+ATPGRL+DH+ +L L +LV DE DR+L + + +L+ +D +
Sbjct: 126 AGVDLLIATPGRLLDHLRQG-ALSLAALRHLVFDEADRMLDMGFMDEIKALLKQIPADRQ 184
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
A T + F K + R P L+++ P ++
Sbjct: 185 TLLFSA-TCDDNLFALSKVLLRD-----------PALIEVA--------PRNTTAAEVEQ 224
Query: 330 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
++ G+ + L E + K G ++F+ + + +L
Sbjct: 225 RVYTVDGDRKLALVEHMLKVK-------------------GWAPALIFSRTRQGADKLA- 264
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
G+ I + G Q R K L FR G +Q LV++D RG+D+ +N V+N
Sbjct: 265 --QQLGKTGINALAFHGDLSQGAREKVLLEFRAGTLQALVATDVAARGLDITDLNYVINM 322
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+ P + Y+HR GRT RAG G TL ++ +K+
Sbjct: 323 EFPFVAEDYVHRIGRTGRAGNKGLAITLFSPEDAPLLEKV 362
>gi|389594423|ref|XP_003722434.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania major
strain Friedlin]
gi|323363662|emb|CBZ12667.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania major
strain Friedlin]
Length = 405
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 191/468 (40%), Gaps = 110/468 (23%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L L++ + G PVQ +E I L +D+ + G+GKT S+ +P+++
Sbjct: 36 ALRRELQMGIFEKGFEKPSPVQ----EEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 91
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
+ R + ++AL+++PTR+LALQ
Sbjct: 92 VDTREL-YVQALLMVPTRELALQT------------------------------------ 114
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV P GL V + G +++ D+I L S V
Sbjct: 115 AQVTKELGKHIP--GLEVMVTTGGTTLRDDILRLT---------------------SKVH 151
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
ILVATPGR++D + + + L H LV+DE D+LL + + +
Sbjct: 152 ILVATPGRVLD-LASKKAVDLSHCHILVLDEADKLLSQEFMEII---------------D 195
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
D T+LPS S M+ SAT A+ LH+P +
Sbjct: 196 DLYTYLPSQLQS-----------------------MLFSATFPVTVKTFAERHLHNPYEI 232
Query: 334 T-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
E K + Y E + K L L L + I+F +SV L +
Sbjct: 233 NLMDELTLK---GVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKIT 289
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G I ++ +Q+Q R++ FREG + LV SD +TRG+D++ VN V+N+D P
Sbjct: 290 QLGYSCYYI--HARMQQQH-RNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFP 346
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 500
Y +TY+HR GR+ R G LG + D+ ++ Q+ D + PI
Sbjct: 347 KYAETYLHRIGRSGRFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPI 394
>gi|67968237|dbj|BAE00180.1| VASA RNA helicase [Daphnia magna]
Length = 779
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 203/479 (42%), Gaps = 117/479 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L ++N G PVQ A +I L +RDL + TGSGKT +Y +P++ L
Sbjct: 354 LRPLLLQNIKNSGYIKPTPVQKA----SIAVILAKRDLIACAVTGSGKTAAYLVPVMNIL 409
Query: 95 SNRAVRCL--------RALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
+ V ++V PTR+LA+Q++ CK+ ++
Sbjct: 410 LEQGVAGASHGMLQKPEVVIVAPTRELAIQIHREACKF-------------------SYN 450
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
S+L +V + G V +R L+AG
Sbjct: 451 SVL---------------KSVIIYGGTVVNH-----------QRTNLQAG---------- 474
Query: 207 ELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTR 265
+ILVAT GRL D ++ RG F + +L++DE DR+L + P + ++
Sbjct: 475 -----CNILVATAGRLKDFLD--RGIFDFTAVRFLILDEADRMLDMGFG---PDIEKMV- 523
Query: 266 SDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQL 325
+ T P K IRR + SAT + LA
Sbjct: 524 --------NHPTMPP------KGIRRV----------------CMFSATFPDEVQALAAT 553
Query: 326 DLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 385
+ +F+TTG P+ +E C + K L+ +LQ LG+ K IVF S ++
Sbjct: 554 YMEDYIFVTTGIVGGTNPD-VEQLFFQCSKRDKRAKLMEVLQDLGDAKTIVFVDSKKTAD 612
Query: 386 RLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNN 445
+ L + ++ G + QS R + L+ F+ G +LV+++ RG+D+ GVN
Sbjct: 613 FVAAFLCN---NNLQSTSIHGDRLQSQREQALRDFKNGVRNILVATNVAARGLDIAGVNY 669
Query: 446 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE----VKRFKKLLQKADNDSCPI 500
VVNYD P I+ Y+HR GRT R G +G+ + ++ V +F LL K++ D P
Sbjct: 670 VVNYDLPTDIEEYVHRVGRTGRVGNIGKSISFFDDEKDGPNVGKFVSLLTKSNADVPPF 728
>gi|47937760|gb|AAH72323.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 429
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 187/444 (42%), Gaps = 110/444 (24%)
Query: 45 NMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRA 104
+GI PVQ + I P L RD + TGSGKT ++ LPI+Q LS
Sbjct: 25 QLGILKPSPVQ----ENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPFGIF-C 79
Query: 105 LVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIA 164
LV+ PTR+LA Q IAE F +
Sbjct: 80 LVLTPTRELAYQ---------------------IAEQ------------------FRVLG 100
Query: 165 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 224
+GL + +G + + EL ++P I++ATPGRL D
Sbjct: 101 KPLGLKDCIIIGGMDMVAQALELSRKPH---------------------IVIATPGRLAD 139
Query: 225 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 284
HI ++ F+++ + +LV+DE DRLL + + D L +
Sbjct: 140 HIRSSNTFSIKKIRFLVMDEADRLLEQGCTDFT---------------QDLQVILEAVPA 184
Query: 285 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLP 343
+T ++ SATLT +L + ++ P F +T E R
Sbjct: 185 QRQT--------------------LLFSATLTDTLQELKTVAMNKPFFWESTSEVR--TV 222
Query: 344 ERLESYKLICESKLKPLYLVALLQSLGEE----KCIVFTSSVESTHRLCTLLNHFGELRI 399
E+L+ ++ K+K YLV L+Q +E ++FT++ ++ L +L F +
Sbjct: 223 EQLDQRYILVPEKVKDAYLVYLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSV 282
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
+ + +Q R L F+ ++L+++D RG+D+ V V+N++ P K YI
Sbjct: 283 AL---HSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYI 339
Query: 460 HRAGRTARAGQLGRCFTLLHKDEV 483
HR GRTARAG+ G TL+ + ++
Sbjct: 340 HRVGRTARAGRNGMAITLVTQYDI 363
>gi|350638465|gb|EHA26821.1| hypothetical protein ASPNIDRAFT_35758 [Aspergillus niger ATCC 1015]
Length = 861
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 165/335 (49%), Gaps = 37/335 (11%)
Query: 8 SMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPG 66
S+P PW+ +P+ S E L +D L L++ G F VQ V + GP
Sbjct: 236 SLP--PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPT 292
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
DLCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+ C
Sbjct: 293 NHPGDLCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREA-CELCA 351
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS----SIAD 182
GL ++ + ++ + SL +V V+ + +V L G ++ D
Sbjct: 352 AG-SGLRVASAVGNVAIKDEQR---SLMRVDQVYGPATFKLRQNVQL-TGDDWTNFNLQD 406
Query: 183 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 242
IS+ + G + E VDIL+ TPGRL+DH+ T+GFTL++L +LV+
Sbjct: 407 YISDAGDLSESLPGYVHRSE-------PNVDILICTPGRLVDHLRYTKGFTLKNLEWLVI 459
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDK 301
DE DRLL E++Q W+ V+ S + P AFG S + G+ K+
Sbjct: 460 DEADRLLNESFQEWVDVVM----------TSLDARKAPDAFGFSGNFLSGLGLPIQSKE- 508
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
PR K+VLSAT+T+D KL L L +P + G
Sbjct: 509 --PR--KVVLSATMTRDVTKLNSLRLANPKLVVIG 539
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R GKI V++++D +RG+D+ + +VVNYD PA I TY+HR GRTAR
Sbjct: 724 NKSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITTYVHRVGRTAR 783
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKADN 495
AGQ G +TL+ E K F + K +
Sbjct: 784 AGQKGSAWTLVAHREGKWFASQIAKGSD 811
>gi|291000284|ref|XP_002682709.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
gi|284096337|gb|EFC49965.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
Length = 955
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 194/478 (40%), Gaps = 131/478 (27%)
Query: 42 ALQNMGISS-----LFPVQV----AVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQ 92
+ ++GISS L +Q+ + ++ I P L +++ S TGSGKT ++ALPI+Q
Sbjct: 137 SFTDLGISSWLEEHLSKLQINMPTVIQEKCIPPTLAGKNVIGMSQTGSGKTAAFALPIIQ 196
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
L+ + + + AL++ P R+LA+Q+
Sbjct: 197 NLA-KDMYGIYALIITPARELAIQI----------------------------------- 220
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
K F +A + + V L VG G+ Y + L L S+
Sbjct: 221 ----KQHFEILAGDLPIRVALLVG-------------------GMDYLKQAHL--LDSSP 255
Query: 213 DILVATPGRLMDHINATRGFT----LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 268
I+V TPGR+ D A R F + + YLV DE DR+ Y L +L ++
Sbjct: 256 HIVVGTPGRIED---AIRTFNNDGYFKKIKYLVFDEADRIFSMDYSLDLDRILSVSN--- 309
Query: 269 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL- 327
P+ ++ SAT+ KLA++ +
Sbjct: 310 -----------------------------------PKRQTLLYSATMNNQVKKLAKMAMS 334
Query: 328 ---------HHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK-CIVF 377
L++ ++L + L Y L +K Y V L+ SL + IVF
Sbjct: 335 NSGKTKEEREQSLYIYDACKLFQLADNLSQYYLFMPEHVKDAYFVQLINSLPDNSISIVF 394
Query: 378 TSSVESTHRLCTLLNHFGEL-RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 436
S + C L+N L I + Q R LK FR+ +++ L +D R
Sbjct: 395 FSDITQ----CELMNQTCRLLGISCDSLHASKSQKERFAVLKYFRKRRLKFLFCTDVANR 450
Query: 437 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
G+D+ V V+NYD P Y+HR GRTARAG+LG C +L+ + EVKR K + D
Sbjct: 451 GLDIPAVGYVINYDLPDTTDKYVHRVGRTARAGRLGVCISLISQFEVKRIKAIESDTD 508
>gi|330445855|ref|ZP_08309507.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490046|dbj|GAA04004.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 455
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 196/458 (42%), Gaps = 105/458 (22%)
Query: 27 CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSY 86
P L D +K A+ MG +S P+Q ++ I L ++L + TG+GKT S+
Sbjct: 1 MPFSKLGLSDSIVK-AVTEMGYTSPTPIQ----EKAIPVALTGKNLMAAAQTGTGKTASF 55
Query: 87 ALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFD 146
LPI+Q L + + V P R AL + R E+ VQ
Sbjct: 56 VLPILQMLDD-------GIKVRPKRVRALILAPTR------------------ELAVQ-- 88
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
V+D + + L S+A + G+ Y+P+ +
Sbjct: 89 ---------VEDNIKQYSKHLNLK--------SMA-----------MYGGVDYEPQK--R 118
Query: 207 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
L VDILVATPGRL+D + R + + LV+DE DR+L + + +++
Sbjct: 119 RLIEGVDILVATPGRLLD-MYTQRAIHFDAIEILVLDEADRMLDMGFIEDINKIVERLPV 177
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
D +N M+ SATL+ LA+
Sbjct: 178 DRQN--------------------------------------MLFSATLSDQVRFLAKTA 199
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+ +P+ ++ + P +++ + + + +K L L+Q E+ ++F +E+ H
Sbjct: 200 VRNPIEISVAKNASADP-KIDQWLVTVDKDMKSSLLSHLIQEQQWEQALIF---IETKHG 255
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L+ + IK + + + Q VRS+ L+ F+ GK+Q L+++ +RG+D+E + V
Sbjct: 256 AAKLVTQLEKRGIKAESFHSGRSQGVRSQLLEDFKNGKLQYLIATGVASRGIDIEQLTRV 315
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
VNYD P + Y+HR GRT RAG G + + KD K
Sbjct: 316 VNYDLPFPPEEYVHRIGRTGRAGASGEAISFVSKDNFK 353
>gi|317025605|ref|XP_001389412.2| ATP-dependent RNA helicase dbp6 [Aspergillus niger CBS 513.88]
Length = 861
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 165/335 (49%), Gaps = 37/335 (11%)
Query: 8 SMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPG 66
S+P PW+ +P+ S E L +D L L++ G F VQ V + GP
Sbjct: 236 SLP--PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPT 292
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
DLCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+ C
Sbjct: 293 NHPGDLCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREA-CELCA 351
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS----SIAD 182
GL ++ + ++ + SL +V V+ + +V L G ++ D
Sbjct: 352 AG-SGLRVASAVGNVAIKDEQR---SLMRVDQVYGPATFKLRQNVQL-TGDDWTNFNLQD 406
Query: 183 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 242
IS+ + G + E VDIL+ TPGRL+DH+ T+GFTL++L +LV+
Sbjct: 407 YISDAGDLSESLPGYVHRSE-------PNVDILICTPGRLVDHLRYTKGFTLKNLEWLVI 459
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDK 301
DE DRLL E++Q W+ V+ S + P AFG S + G+ K+
Sbjct: 460 DEADRLLNESFQEWVDVVM----------TSLDARKAPDAFGFSGNFLSGLGLPIQSKE- 508
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
PR K+VLSAT+T+D KL L L +P + G
Sbjct: 509 --PR--KVVLSATMTRDVTKLNSLRLANPKLVVIG 539
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 408 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 467
+ S KTL A+R GKI V++++D +RG+D+ + +VVNYD PA I TY+HR GRTAR
Sbjct: 724 NKSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITTYVHRVGRTAR 783
Query: 468 AGQLGRCFTLLHKDEVKRFKKLLQKADN 495
AGQ G +TL+ E K F + K +
Sbjct: 784 AGQKGSAWTLVAHREGKWFASQIAKGSD 811
>gi|336375445|gb|EGO03781.1| hypothetical protein SERLA73DRAFT_46424 [Serpula lacrymans var.
lacrymans S7.3]
Length = 615
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 149/510 (29%), Positives = 225/510 (44%), Gaps = 77/510 (15%)
Query: 31 HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPI 90
H L P L L + G ++ P+Q +++ + RD+ + TGSGKTL+Y LPI
Sbjct: 35 HSYSLHPHLLQILHHQGFTTPTPIQ----SKSLPKAMEGRDIVGVAETGSGKTLAYGLPI 90
Query: 91 VQTL-------SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCV 143
+ L S++ R ++ALV+ PTR+LALQV S ++I I + ++
Sbjct: 91 LHHLLSRSRHPSSKVKRQVQALVLAPTRELALQV-SDHLNMFARSIEAPIKEETLDVELS 149
Query: 144 QFDSLLFISLPQVKDVFAAIAPAVG----LSVGLAVGQSSIADEISELIKRPKLEAGICY 199
+ L S + K+V + A +S+ VG S A + +I R
Sbjct: 150 ETQQLKDKS--KGKNVVSGTAKTFSKPPLVSIAAIVGGMS-AQKQRRIIDR--------- 197
Query: 200 DPEDVLQELQSAVDILVATPGRLMDHINATRGFT--LEHLCYLVVDETDRLLREAYQAWL 257
VDIL+ATPGRL D + L L YL++DE DR++ + A L
Sbjct: 198 -----------GVDILIATPGRLWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAEL 246
Query: 258 PTVLQLT--------RSDNE----NRFSDA-STFLPSAFGS------LKTIRRCGVERGF 298
+L+LT D E DA TF+ SA S LK R + +
Sbjct: 247 DNILRLTLRLSRFFETQDTEVQAHAETEDALQTFVFSATLSKDLQRDLKKGYRPRIGKKG 306
Query: 299 KDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLK 358
+ KP L +VL +D N +D+ + +G L+ K+ C S K
Sbjct: 307 RSKPASTLEDLVLRLDF-RDANPEV-IDISPEGGVVSG---------LQESKIECLSADK 355
Query: 359 PLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
+YL LL+ G + +VF SS++ RL L++ L +K+ Q R K L
Sbjct: 356 DIYLYYFLLRYPG--RSLVFLSSIDGIRRLTPLMD---LLNVKVFPLHSQLEQRQRLKNL 410
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
F+ VL+++D RG+D+ V++V++Y P T+IHR GRTARA + G +
Sbjct: 411 DRFKSTPNSVLLATDIAARGLDIPAVDHVIHYQIPRSADTFIHRNGRTARAMRKGFSLLM 470
Query: 478 LHKDEVKRFKKLLQKADNDSCPIHSIPSSL 507
DE + K LL D I I L
Sbjct: 471 CAPDERRVVKALLLSLGRDDADIPEISVEL 500
>gi|85711377|ref|ZP_01042436.1| ATP-dependent RNA helicase [Idiomarina baltica OS145]
gi|85694878|gb|EAQ32817.1| ATP-dependent RNA helicase [Idiomarina baltica OS145]
Length = 423
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 191/458 (41%), Gaps = 114/458 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P + AL G + P+Q + I + D+ + TG+GKT + LPI++ L
Sbjct: 10 PEILNALTRQGYTEPTPIQA----QAIPAVMAGNDVMAAAQTGTGKTAGFTLPILEMLKG 65
Query: 95 SNRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
+ RA R L++ PTR+LA QV + Y L
Sbjct: 66 NERAKANTARVLILTPTRELAAQVGESVANYGK-------------------------DL 100
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
P LS + G I ++ KL G+ D+L
Sbjct: 101 P--------------LSYAVVFGGVKINPQMM------KLRKGV-----DIL-------- 127
Query: 214 ILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
VATPGRL+D NA R L LV+DE DR+L + + +++L + +N
Sbjct: 128 --VATPGRLLDLYQQNAIR---FPQLETLVLDEADRMLDMGFIHDIKKIIKLLPAKRQN- 181
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
++ SAT + + KLA+ +++P+
Sbjct: 182 -------------------------------------LMFSATFSDEIRKLAKSLVNNPV 204
Query: 332 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
++ ER+E E KP L+ +L++L + IVF+ + +RL L
Sbjct: 205 EISVAAPNATA-ERIEQTLYAAEKTHKPRMLMQILRNLNLPQVIVFSRTKHGANRLVKQL 263
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
+ G L I G + Q R+K L F+ G +QVLV++D RG+D+E + V+NYD
Sbjct: 264 DKDGFLAAAI---HGNKSQGARTKALSDFKSGAVQVLVATDIAARGLDIEKLPYVINYDL 320
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
P + Y+HR GRT RAGQ+G +L+ +E + K +
Sbjct: 321 PQVAEDYVHRIGRTGRAGQVGHAISLVMDEEFRTLKAI 358
>gi|398022937|ref|XP_003864630.1| ATP-dependent DEAD-box RNA helicase, putative [Leishmania donovani]
gi|322502866|emb|CBZ37948.1| ATP-dependent DEAD-box RNA helicase, putative [Leishmania donovani]
Length = 405
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 190/468 (40%), Gaps = 110/468 (23%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L L++ + G PVQ +E I L +D+ + G+GKT S+ +P+++
Sbjct: 36 ALRRELQMGIFEKGFEKPSPVQ----EEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 91
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
+ R ++AL+++PTR+LALQ
Sbjct: 92 VDTRE-SYVQALLMVPTRELALQT------------------------------------ 114
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV P GL V + G +++ D+I L S V
Sbjct: 115 AQVTKELGKHIP--GLEVMVTTGGTTLRDDILRLT---------------------SKVH 151
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
ILVATPGR++D + + + L H LV+DE D+LL + + +
Sbjct: 152 ILVATPGRVLD-LASKKAVDLSHCHILVLDEADKLLSQEFMEII---------------D 195
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
D T+LPS S M+ SAT A+ LH+P +
Sbjct: 196 DLYTYLPSQLQS-----------------------MLFSATFPVTVKTFAERHLHNPYEI 232
Query: 334 T-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
E K + Y E + K L L L + I+F +SV L +
Sbjct: 233 NLMDELTLK---GVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKIT 289
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G I ++ +Q+Q R++ FREG + LV SD +TRG+D++ VN V+N+D P
Sbjct: 290 QLGYSCYYI--HARMQQQH-RNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFP 346
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 500
Y +TY+HR GR+ R G LG + D+ ++ Q+ D + PI
Sbjct: 347 KYAETYLHRIGRSGRFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPI 394
>gi|401429120|ref|XP_003879042.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495292|emb|CBZ30595.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 405
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 190/468 (40%), Gaps = 110/468 (23%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L L++ + G PVQ +E I L +D+ + G+GKT S+ +P+++
Sbjct: 36 ALRRELQMGIFEKGFEKPSPVQ----EEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 91
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
+ R ++AL+++PTR+LALQ
Sbjct: 92 VDTRE-SYVQALLMVPTRELALQT------------------------------------ 114
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV P GL V + G +++ D+I L S V
Sbjct: 115 AQVTKELGKHIP--GLEVMVTTGGTTLRDDILRLT---------------------SKVH 151
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
ILVATPGR++D + + + L H LV+DE D+LL + + +
Sbjct: 152 ILVATPGRVLD-LASKKAVDLSHCHILVLDEADKLLSQEFMEII---------------D 195
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
D T+LPS S M+ SAT A+ LH+P +
Sbjct: 196 DLYTYLPSQLQS-----------------------MLFSATFPVTVKTFAERHLHNPYEI 232
Query: 334 T-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
E K + Y E + K L L L + I+F +SV L +
Sbjct: 233 NLMDELTLK---GVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKIT 289
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G I ++ +Q+Q R++ FREG + LV SD +TRG+D++ VN V+N+D P
Sbjct: 290 QLGYSCYYI--HARMQQQH-RNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFP 346
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 500
Y +TY+HR GR+ R G LG + D+ ++ Q+ D + PI
Sbjct: 347 KYAETYLHRIGRSGRFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPI 394
>gi|281207583|gb|EFA81766.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 802
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 194/449 (43%), Gaps = 110/449 (24%)
Query: 48 ISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLR---- 103
+++ F A+ ++ L RD+ + TGSGKTL++ LP V ++ +
Sbjct: 414 VAAGFAAPTAIQAQSWPVALKGRDMIGLAETGSGKTLAFLLPGVVHINAQPFLEPNDGPI 473
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD--VFA 161
LV+ PTR+LA M +Q + F S ++K+ V+
Sbjct: 474 MLVLAPTRELA--------------------------MQIQAECDKFGSSSKIKNCAVYG 507
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ PK + +L+S V+I++ATPGR
Sbjct: 508 GV---------------------------PKFQQ---------TSQLRSGVEIVIATPGR 531
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+D + TR L+ + YLV+DE DR+L ++ + +L R D + T + S
Sbjct: 532 LIDLL-ETRKTNLKRVTYLVLDEADRMLDMGFEDQIRKILSQIRPDRQ-------TLMFS 583
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
A +P++V+ LA L P+ + G
Sbjct: 584 A-------------------TWPKVVQ------------SLANDFLKDPIQIKIGSAELS 612
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
++ ICE K L + L+ +G+EKCI+F +E+ + + L + K
Sbjct: 613 ANHNVKQIIEICEKNDKQQRLFSFLEKVGDEKCIIF---METKNGVNLLQRNMQVAGFKC 669
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G + Q R +L+ F++ IQ+L+++D +RG+DV+ + V+NYD P I++YIHR
Sbjct: 670 AGIHGDKTQGERDYSLQQFKKSGIQMLIATDVASRGLDVKDIKYVINYDFPNTIESYIHR 729
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLL 490
GRT RAG G FTL ++++ +L+
Sbjct: 730 IGRTGRAGATGTAFTLFTTNDMRLAGELI 758
>gi|452211065|ref|YP_007491179.1| ATP-dependent RNA helicase [Methanosarcina mazei Tuc01]
gi|452100967|gb|AGF97907.1| ATP-dependent RNA helicase [Methanosarcina mazei Tuc01]
Length = 389
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 200/445 (44%), Gaps = 107/445 (24%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F A+ +++I L D+ + TGSGKTLS+A I+Q ++ + ++AL++ PTR
Sbjct: 9 FESPTAIQEKSIPLILAGEDVIGGAATGSGKTLSFASGILQ--NSEKGKGIQALILTPTR 66
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA QV ++ K+ ++D L A+I VG++
Sbjct: 67 ELAEQVANSLRKFS------------------KYDPL----------NIASIYGGVGINT 98
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
+ +EL++A +++V TPGRL+DHI +
Sbjct: 99 QI--------------------------------KELKNA-EVVVGTPGRLLDHI-SRNT 124
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
L ++ LV+DE D + + +
Sbjct: 125 IKLNNVKTLVLDEADHMFDMGF-------------------------------------K 147
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
VE+ K+ P R ++ SAT+T+D +L++ + +P+ ++T Y P++L
Sbjct: 148 VDVEKIIKECPQNRQT-LLFSATITKDIVQLSRKYMKNPVRVST--ESYIDPQKLNQVVY 204
Query: 352 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQS 411
+ +K LV LLQ+ +VF ++ +T ++ L + I + GL Q+
Sbjct: 205 KVQDDMKLSLLVYLLQNEKSNLGMVFCNTKRNTDKVAKNLRKSSINAVAI--HGGLT-QN 261
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
R++ ++ F G I VLV +D RG+D++GV++V NYD P K YIHR GRTARAG
Sbjct: 262 ERTRIMEKFHSGNIGVLVCTDVAGRGLDIQGVSHVYNYDIPRESKQYIHRIGRTARAGTE 321
Query: 472 GRCFTLLHKDEVKRFKKLLQKADND 496
G+ +L K++ F +L+ D D
Sbjct: 322 GKAINILSKNDHANFMSVLKDNDVD 346
>gi|375099094|ref|ZP_09745357.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
gi|374659826|gb|EHR59704.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea NA-134]
Length = 552
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 180/447 (40%), Gaps = 107/447 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
AL + GI F +Q T+ L D+ + TG+GKTL + +P++Q L+
Sbjct: 37 ALGDSGIERTFDIQAL----TLPLALRGEDVIGQARTGTGKTLGFGVPLLQRLTLPGDGT 92
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
+ALVV+PTR E+CVQ L
Sbjct: 93 PQALVVVPTR----------------------------ELCVQVHEDLT----------- 113
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
G +G+ V + G Y E ++ L+ VD+++ TPGR
Sbjct: 114 ----KAGKHLGVRVA---------------SIYGGRPY--ESQIKSLRDGVDVVIGTPGR 152
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+D + R L + LV+DE D +L FLP
Sbjct: 153 LLD-LAEQRHLVLGKVSTLVLDEADEMLDLG-------------------------FLPD 186
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY- 340
+ER + P R M+ SAT+ LA+ LH P + +
Sbjct: 187 ------------IERVLRMVPDERQT-MLFSATMPGPILTLARTFLHQPTHIRAEDNEAG 233
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
+ ER Y S KP + +LQ+ ++FT + + ++ L G
Sbjct: 234 AVHERTTQYAYRSHSLDKPELVAKVLQAEDRGLTMIFTRTKRTAQKVADDLAERG---FA 290
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
G Q R + L+AFR GK+ VLV++D RG+DV+ V +V+NY P KTY+H
Sbjct: 291 AAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAARGIDVDDVTHVINYQTPEDEKTYVH 350
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFK 487
R GRT RAG+ G TL+ DE+ R+K
Sbjct: 351 RIGRTGRAGKTGVAITLVDWDEIPRWK 377
>gi|171913474|ref|ZP_02928944.1| DEAD/DEAH box helicase-like protein [Verrucomicrobium spinosum DSM
4136]
Length = 452
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 191/453 (42%), Gaps = 113/453 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN----R 97
A+Q G S P+Q A + + D+ + TG+GKT ++ LP++ L+
Sbjct: 15 AIQEAGYSEPTPIQAAAIPQVVA----GHDMIGIAQTGTGKTAAFTLPMLHLLAQLHGQG 70
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP-QV 156
+R ++AL++ PTR+L Q++ Y A H LP +V
Sbjct: 71 PLRGIKALILAPTRELVAQIHDNVRAY---------AKH----------------LPLKV 105
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+F + +RP++EA L++ D+++
Sbjct: 106 AMIFGGVG------------------------ERPQIEA------------LRAGTDLVI 129
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL+D + G L +LV+DE DR+L
Sbjct: 130 ATPGRLIDLMGQRHG-NFNSLEFLVLDEADRMLDMG------------------------ 164
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
FLPS ++R K P R ++ SATL+++ L L+HP + G
Sbjct: 165 -FLPS------------IKRIVKALPKKRQT-LLFSATLSKEIEALTHEFLNHPKTVQIG 210
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+ R E + + LKP LV LL+ +VF+ R+ L+ +G
Sbjct: 211 K-RSNPAESVTQFVYEVPKHLKPALLVHLLKDPAFNMVLVFSRMKHGADRIARHLDRYG- 268
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
IK + Q+ R + L F+ G +VLV++D RG+DV+G+++VVNYD P + +
Sbjct: 269 --IKTVTLHSNRTQNQRLRALADFKSGAARVLVATDIAARGIDVDGISHVVNYDFPMHAE 326
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
Y+HR GRT RA +G + + ++ K L
Sbjct: 327 DYVHRIGRTGRAHAVGDAISFISPEDHGPLKSL 359
>gi|198424759|ref|XP_002127650.1| PREDICTED: similar to Ddx10 protein [Ciona intestinalis]
Length = 736
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 195/486 (40%), Gaps = 121/486 (24%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
V FE+ P + K L+ G SL +Q A I P + +D+ + TGS
Sbjct: 47 VEKFEEFPFA------TKTKAGLRKAGFVSLTAIQRAA----IKPAMLGKDILGAAKTGS 96
Query: 81 GKTLSYALPIVQTLSNRAVRCLR---ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
GKTL++ +PI++ L L ALV+ PTR+LA Q IF
Sbjct: 97 GKTLAFIIPILECLHKHNWNSLDGPGALVISPTRELAFQ------------IF------- 137
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
+V + S GL +G +++ +E + K
Sbjct: 138 --------------------EVLKKVGGKHNFSAGLLIGGNNVKEEAHSVGK-------- 169
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWL 257
+I++ TPGRL+ H++ T F + +L L++DE DR+L ++ L
Sbjct: 170 --------------TNIIICTPGRLLQHMDTTSYFHMNNLKMLILDEADRILDMGFKTTL 215
Query: 258 PTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQ 317
++ EN LPS +L + SAT T+
Sbjct: 216 DAII-------EN--------LPSERQTL-----------------------LFSATQTK 237
Query: 318 DPNKLAQLDLHHPLFLTT-GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 376
LA+L L P +++ E ++ P+ L + CE K K L + +++ + KC+V
Sbjct: 238 SVKDLARLSLRDPAYISVHSEAKHSTPQGLTQRFICCELKDKLNVLFSFIRNHQKSKCLV 297
Query: 377 FTSSVESTHRLCTLLNHFGELR--IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
F SS + + F +LR + G Q R + F K VLV++D
Sbjct: 298 FVSSCKQVQ---FIFAAFCKLRPGTPMLHLHGRMNQLRRMSVYQEFCRKKFAVLVATDIA 354
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
RG+D ++ VV D P TYIHRAGRTAR G +L E + K LQ
Sbjct: 355 ARGLDFPEIDWVVQLDCPEDADTYIHRAGRTARYNGNGNSLLVLTPTEKEAMLKHLQ--- 411
Query: 495 NDSCPI 500
N PI
Sbjct: 412 NKKVPI 417
>gi|146100408|ref|XP_001468856.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania infantum
JPCM5]
gi|134073225|emb|CAM71946.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania infantum
JPCM5]
Length = 405
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 190/468 (40%), Gaps = 110/468 (23%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L L++ + G PVQ +E I L +D+ + G+GKT S+ +P+++
Sbjct: 36 ALRRELQMGIFEKGFEKPSPVQ----EEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 91
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
+ R ++AL+++PTR+LALQ
Sbjct: 92 VDTRE-SYVQALLMVPTRELALQT------------------------------------ 114
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
QV P GL V + G +++ D+I L S V
Sbjct: 115 AQVTKELGKHIP--GLEVMVTTGGTTLRDDILRLT---------------------SKVH 151
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
ILVATPGR++D + + + L H LV+DE D+LL + + +
Sbjct: 152 ILVATPGRVLD-LASKKAVDLSHCHILVLDEADKLLSQEFMEII---------------D 195
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
D T+LPS S M+ SAT A+ LH+P +
Sbjct: 196 DLYTYLPSQLQS-----------------------MLFSATFPVTVKTFAERHLHNPYEI 232
Query: 334 T-TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
E K + Y E + K L L L + I+F +SV L +
Sbjct: 233 NLMDELTLK---GVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKIT 289
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G I ++ +Q+Q R++ FREG + LV SD +TRG+D++ VN V+N+D P
Sbjct: 290 QLGYSCYYI--HARMQQQH-RNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFP 346
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPI 500
Y +TY+HR GR+ R G LG + D+ ++ Q+ D + PI
Sbjct: 347 KYSETYLHRIGRSGRFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPI 394
>gi|408825690|ref|ZP_11210580.1| DEAD/DEAH box helicase [Streptomyces somaliensis DSM 40738]
Length = 439
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 193/460 (41%), Gaps = 113/460 (24%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L AL+ G+++ FP+Q A + L RD+ TGSGKTL++ L ++ L
Sbjct: 20 PALLRALEAEGVTAPFPIQAATLPNS----LAGRDVLGRDRTGSGKTLAFGLALLARLDG 75
Query: 97 RAVRCLR--ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R ALV++PTR+LA QV
Sbjct: 76 VRAEPKRPLALVLVPTRELAQQVT------------------------------------ 99
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
D A A A+GL VG SI ++S L ++ D+
Sbjct: 100 ---DALAPYARALGLRQATVVGGVSIGRQVSAL---------------------RAGADV 135
Query: 215 LVATPGRLMDHINATRGF-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
LVATPGRL D + TRG L+ + V+DE D++ + + +L+LTR D +
Sbjct: 136 LVATPGRLRDLV--TRGDCLLDDVDVTVLDEADQMTDMGFLPQITGLLELTRPDGQ---- 189
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
+M+ SATL ++ + L + LH P+
Sbjct: 190 ----------------------------------RMLFSATLDRNVDSLVRRYLHDPVVH 215
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
+ T + +E + L + K + G + I+F +++ H + L H
Sbjct: 216 SVDPT-AGVVTSMEHHVLHVQEADKNATATEIAARDG--RVIMF---LDTKHAVDRLTKH 269
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
+ ++ G + Q R++TL F+EG + VLV+++ RG+ V+ ++ VVN D PA
Sbjct: 270 LLKSGVRASALHGGKSQPQRTRTLTQFKEGHVTVLVATNVAARGIHVDDLDLVVNVDPPA 329
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
K Y+HR GRTARAG+ G TL+ + + L+ A
Sbjct: 330 DHKDYLHRGGRTARAGESGSVVTLVLPHQRRDMDSLMSHA 369
>gi|47228482|emb|CAG05302.1| unnamed protein product [Tetraodon nigroviridis]
Length = 599
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 195/482 (40%), Gaps = 132/482 (27%)
Query: 43 LQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCL 102
L + S + PVQ A I + +D+ + TGSGKTL++ +PI++ L R +
Sbjct: 24 LGELKFSHMTPVQSAC----IPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKLK 79
Query: 103 R----ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
+ ALV+ PTR+LALQ I+++ QF PQ
Sbjct: 80 KMQVGALVITPTRELALQ---------------------ISQVMEQF----LQRFPQFTQ 114
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
+ L G + I EDV + +I++AT
Sbjct: 115 IL------------LIGGSNPI---------------------EDVEKFKDQGANIVIAT 141
Query: 219 PGRLMDHINATRGFTLEHLCY------LVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
PGRL D + L+ C+ LV+DE DRLL ++A L +L
Sbjct: 142 PGRLEDMFK-RKADGLDLACWVKSLEVLVLDEADRLLDMGFEASLNAIL----------- 189
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
G L RR G+ SAT TQ+ KL + L +P+
Sbjct: 190 -----------GHLPKQRRTGL----------------FSATQTQELEKLVRAGLRNPVR 222
Query: 333 LTTGETR------YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
+T E K P RL +Y IC S+ K +LVA L+ EK +VF S+
Sbjct: 223 ITVKEKGAAASAVQKTPSRLSNYYTICRSEDKFNHLVAFLRQHKHEKNLVFFST------ 276
Query: 387 LCTLLNHFGE-LRIKIKEYS----GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
C + +FG L IK+ + + + R+K FR K +LV +D M RG+D+
Sbjct: 277 -CACVEYFGRALETLIKKANVCCIHGKMKDKRNKIFAEFRSLKSGILVCTDVMARGIDIP 335
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH 501
VN V+ YD P+ ++HR GRTAR G G L E L + N CP+
Sbjct: 336 DVNWVLQYDPPSSASAFVHRCGRTARIGNQGNALVFLLPMEESYVNFL---SINQKCPLQ 392
Query: 502 SI 503
+
Sbjct: 393 KM 394
>gi|126729580|ref|ZP_01745393.1| ATP-dependent RNA helicase RhlE [Sagittula stellata E-37]
gi|126709699|gb|EBA08752.1| ATP-dependent RNA helicase RhlE [Sagittula stellata E-37]
Length = 469
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 198/472 (41%), Gaps = 121/472 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P++ A++ G ++ P+Q I L +D+ + TG+GKT S+ LP++ L
Sbjct: 9 LSPKVLKAIEEAGYTTPTPIQAGA----IPHALEGKDVLGIAQTGTGKTASFTLPMIHKL 64
Query: 95 S-NRA-VRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
+ RA R R+LV+ PTR+LA
Sbjct: 65 ARGRARARMPRSLVLCPTRELA-------------------------------------- 86
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
QV + F + V L+ L +G G+ + +DVL + V
Sbjct: 87 -AQVAENFDTYSKHVKLTKALLIG-------------------GVSFKEQDVL--IDKGV 124
Query: 213 DILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 271
D+L+ATPGRL+DH RG L + +VVDE DR+L
Sbjct: 125 DVLIATPGRLLDHFE--RGKLLLTGIEIMVVDEADRMLDMG------------------- 163
Query: 272 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 331
F+P +ER F P+ R + SAT+ + ++ L P
Sbjct: 164 ------FIPD------------IERIFSLTPFTRQT-LFFSATMAPEIERITNTFLSAPA 204
Query: 332 FL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE--EKCIVFTSSVES 383
+ T ET + + ES K L AL+ + GE I+F +
Sbjct: 205 RIEVARQATASETITQGAVVFTPSRRDRESSEKRAVLRALIDAEGEACSNAIIFCNRKVD 264
Query: 384 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
+ L +G I G QS R++TL FR+G +++L++SD RG+D+ V
Sbjct: 265 VDIVAKSLTKYGYNAAPIH---GDLDQSQRTRTLDGFRDGSVRLLIASDVAARGLDIPAV 321
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF---KKLLQK 492
+V N+D P++ + Y+HR GRT RAG+ G+ +T+ + K F +KLLQK
Sbjct: 322 THVFNFDVPSHAEDYVHRIGRTGRAGRSGKAYTICTPRDEKYFDAVEKLLQK 373
>gi|392404056|ref|YP_006440668.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
gi|390612010|gb|AFM13162.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
Length = 424
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 190/439 (43%), Gaps = 107/439 (24%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + +E I L +D+ + TG+GKT ++ LP+++ LS + R +RALVV PTR
Sbjct: 22 FKAPTPIQKEAIPHALAGKDILGLAQTGTGKTAAFVLPMLEKLSAQPARKIRALVVAPTR 81
Query: 112 DLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSV 171
+LA Q++ I L D + M +
Sbjct: 82 ELAEQIHQV--------IVTLGKDTRLQSMTI---------------------------- 105
Query: 172 GLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG 231
G +S+ ++ EL K VDI+VA PGRL+DH+ +
Sbjct: 106 ---YGGASMNRQLGELRK---------------------GVDIVVACPGRLLDHLQ-RKS 140
Query: 232 FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRR 291
TL+ + LV+DE D++ +LP + Q+ + R +
Sbjct: 141 LTLDAVETLVLDEADQMFD---MGFLPAIKQIVAKLPQKRQT------------------ 179
Query: 292 CGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKL 351
M+ SAT+ ++ KL+ L P+ + + P S+ L
Sbjct: 180 -----------------MLFSATMPEEIRKLSAQILREPVKVELA----RGPVATISHAL 218
Query: 352 I-CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQ 410
+LK L+ LL+ G++ +VFT ++ H+ L + + G Q
Sbjct: 219 YPVTHELKTPLLLHLLKDAGDQPILVFT---KTKHKATRLADQLAKAGFTTASLQGNLSQ 275
Query: 411 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 470
+ R L F+ GK Q+LV++D RG+DV +++++NYD PA +TYIHR GRTARA +
Sbjct: 276 NRRDSALAGFKSGKYQILVATDIAARGIDVNNISHIINYDIPASSETYIHRIGRTARATK 335
Query: 471 LGRCFTLLHKDEVKRFKKL 489
G +T + ++ ++ +++
Sbjct: 336 SGDAYTFVTSEDNRQVREI 354
>gi|372271032|ref|ZP_09507080.1| DEAD/DEAH box helicase [Marinobacterium stanieri S30]
Length = 433
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 197/475 (41%), Gaps = 110/475 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A+ + G + P+Q Q+ I L RD+ + TG+GKT + LP+++ LS
Sbjct: 15 AISDQGYDTPSPIQ----QQAIPAVLEGRDVMAAAQTGTGKTAGFTLPLLERLSK----- 65
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
R K + L +A QV D A
Sbjct: 66 -----------------GERAKANQARVLILTPTRELAA--------------QVADSVA 94
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ L + G G+ +P+ + L+ DIL+ATPGR
Sbjct: 95 TYGKHLQLKSAVVFG-------------------GVKINPQ--MMALRKGADILIATPGR 133
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+D +++ ++L LV+DE DR+L + + +L+L S +N
Sbjct: 134 LLD-LHSQNAVRFDNLEALVLDEADRMLDMGFIHDIKRILRLLPSKRQN----------- 181
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
++ SAT ++D +LA+ ++ P+ ++ R
Sbjct: 182 ---------------------------LLFSATFSKDIRELAKGLVNDPVEVSV-TPRNS 213
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
E ++ + + K K L+ L++ + +VFT + +RL T L+ + IK
Sbjct: 214 TAETVKQWIAPVDKKRKSPLLIKLIKDNSWYQVLVFTRTKHGANRLATQLD---KANIKA 270
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G + Q R+K L AF+ IQVLV++D RG+D++ + VVN+D P + Y+HR
Sbjct: 271 AAIHGNKSQGARTKALNAFKTKDIQVLVATDIAARGLDIDLLPQVVNFDLPNVAEDYVHR 330
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
GRT RAG G+ +L+ DE+ + + + + IP +I+ PV++
Sbjct: 331 IGRTGRAGADGQAVSLVSADEIDQLRAI------ERLTSKIIPREMIDGFEPVHE 379
>gi|147899081|ref|NP_001086608.1| ATP-dependent RNA helicase DDX55 [Xenopus laevis]
gi|82199952|sp|Q6AZV7.1|DDX55_XENLA RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|50603912|gb|AAH77172.1| Ddx55-prov protein [Xenopus laevis]
Length = 594
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 207/501 (41%), Gaps = 133/501 (26%)
Query: 30 DHLPC-LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
D LP L+ ++ L+ + + + PVQ A TI + +D+ + TGSGKTL++ +
Sbjct: 10 DSLPQKLNGSIRRTLEELKFTHMTPVQSA----TIPLFMNNKDIAAEAITGSGKTLAFVI 65
Query: 89 PIVQTLSNRAVRCLR----ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQ 144
P+++ L R + + AL++ PTR+LA+Q++ + H
Sbjct: 66 PLLEILLKREEKLKKNQVGALIITPTRELAVQIDE---------VLSCFTKH-------- 108
Query: 145 FDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 204
PQ + L +G S+ D DV
Sbjct: 109 --------FPQFSQI-------------LLIGGSNPVD--------------------DV 127
Query: 205 LQELQSAVDILVATPGRLMDHIN-ATRGFTL----EHLCYLVVDETDRLLREAYQAWLPT 259
+ + +I+VATPGRL D G L + L L++DE DRLL ++A + T
Sbjct: 128 RKFKEHGGNIIVATPGRLEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINT 187
Query: 260 VLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDP 319
+L FLP RR G + SAT TQ+
Sbjct: 188 IL---------------GFLPKQ-------RRTG----------------LFSATQTQEL 209
Query: 320 NKLAQLDLHHPLFLTTGE------TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 373
L + L +P+ + E + K P RL++Y +IC++ K L+A LQ +EK
Sbjct: 210 ENLVRAGLRNPVRIAVKEKGVAATSTQKTPIRLQNYYMICKADEKFNKLIAFLQKRKQEK 269
Query: 374 CIVFTSSVESTHRLCTLLNHFGELR------IKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
+VF S+ C + ++G+ +K+ G + R++ FR+ +
Sbjct: 270 HLVFFST-------CACVEYYGKALEMLLKPVKVMCIHGKMKHK-RNRIFTEFRKINSGI 321
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
LV +D M RG+D+ VN VV YD P+ ++HR GRTAR G G L E
Sbjct: 322 LVCTDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRTARIGHHGSALVFLLPMEESYVS 381
Query: 488 KLLQKADNDSCPIHSIPSSLI 508
L + N CP+ + +I
Sbjct: 382 FL---SINQKCPLQEMTELII 399
>gi|373853830|ref|ZP_09596629.1| DEAD/DEAH box helicase domain protein [Opitutaceae bacterium TAV5]
gi|372473357|gb|EHP33368.1| DEAD/DEAH box helicase domain protein [Opitutaceae bacterium TAV5]
Length = 539
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 195/454 (42%), Gaps = 117/454 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQT 93
L+ + A MG + P+Q P + E RD+ ++ TG+GKT ++ALP++
Sbjct: 141 LNDAIAFAAAEMGYTDPTPIQAQAV-----PLVLEGRDVTGSAQTGTGKTAAFALPVLHR 195
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L LR LV+ PTR+LALQ
Sbjct: 196 LGAHG--RLRCLVLEPTRELALQ------------------------------------- 216
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
V++ F + L+ + G G+ Y + ++LQ VD
Sbjct: 217 --VEEAFQKYSKYTDLTTTIVYG-------------------GVGYGKQ--REDLQRGVD 253
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
+L ATPGRL+DH+ TL+ + L++DE DR+L +LP V ++
Sbjct: 254 VLAATPGRLLDHLEQGT-LTLDSIEILILDEVDRMLD---MGFLPDVKRI---------- 299
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD---LHHP 330
+++C ER + SATL P +LAQL L P
Sbjct: 300 ---------------VQQCPRER----------QTLFFSATL---PPELAQLSSWALRDP 331
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + G+ R ++ + S+ L L+ LL+ + I+FT + R+
Sbjct: 332 VQIKIGQRRSPAETVSHAFYPVVASQKFDL-LIELLKRTEFKSIIIFTRTKMGADRIAHR 390
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L + + + QR+ V + L+ F+ GK +VLV++D RG+D+ GV++V+NYD
Sbjct: 391 LQR-EQHTVGVIHSDRSQRERV--EALEGFKSGKFEVLVATDIAARGLDIAGVSHVINYD 447
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
P + Y+HR GRT RA G FTL+ +D+V+
Sbjct: 448 VPENAEDYVHRIGRTGRANATGDAFTLVTEDDVR 481
>gi|391229094|ref|ZP_10265300.1| DNA/RNA helicase, superfamily II [Opitutaceae bacterium TAV1]
gi|391218755|gb|EIP97175.1| DNA/RNA helicase, superfamily II [Opitutaceae bacterium TAV1]
Length = 539
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 195/454 (42%), Gaps = 117/454 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE-RDLCINSPTGSGKTLSYALPIVQT 93
L+ + A MG + P+Q P + E RD+ ++ TG+GKT ++ALP++
Sbjct: 141 LNDAIAFAAAEMGYTEPTPIQAQAV-----PLVLEGRDVTGSAQTGTGKTAAFALPVLHR 195
Query: 94 LSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISL 153
L LR LV+ PTR+LALQ
Sbjct: 196 LGAHG--RLRCLVLEPTRELALQ------------------------------------- 216
Query: 154 PQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 213
V++ F + L+ + G G+ Y + ++LQ VD
Sbjct: 217 --VEEAFQKYSKYTDLTTTIVYG-------------------GVGYGKQ--REDLQRGVD 253
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
+L ATPGRL+DH+ TL+ + L++DE DR+L +LP V ++
Sbjct: 254 VLAATPGRLLDHLEQGT-LTLDSIEILILDEVDRMLD---MGFLPDVKRI---------- 299
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD---LHHP 330
+++C ER + SATL P +LAQL L P
Sbjct: 300 ---------------VQQCPRER----------QTLFFSATL---PPELAQLSSWALRDP 331
Query: 331 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 390
+ + G+ R ++ + S+ L L+ LL+ + I+FT + R+
Sbjct: 332 VQIKIGQRRSPAETVSHAFYPVVASQKFDL-LIELLKRTEFKSIIIFTRTKMGADRIAHR 390
Query: 391 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 450
L + + + QR+ V + L+ F+ GK +VLV++D RG+D+ GV++V+NYD
Sbjct: 391 LQR-EQHTVGVIHSDRSQRERV--EALEGFKSGKFEVLVATDIAARGLDIAGVSHVINYD 447
Query: 451 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
P + Y+HR GRT RA G FTL+ +D+V+
Sbjct: 448 VPENAEDYVHRIGRTGRANATGDAFTLVTEDDVR 481
>gi|451979881|ref|ZP_21928289.1| ATP-dependent RNA helicase rhlE [Nitrospina gracilis 3/211]
gi|451762901|emb|CCQ89503.1| ATP-dependent RNA helicase rhlE [Nitrospina gracilis 3/211]
Length = 436
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 209/497 (42%), Gaps = 131/497 (26%)
Query: 32 LPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIV 91
L +DP L+ +L+ + P+Q E+I L RDL + TG+GKT ++ALP++
Sbjct: 16 LNLIDPILR-SLEEEQYQTPTPIQ----SESIPHLLQGRDLLGCAQTGTGKTAAFALPLL 70
Query: 92 QTLSNRAV----RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
Q L+ + RAL++ PTR+LA+
Sbjct: 71 QRLAESNTVPGPKGARALILAPTRELAV-------------------------------- 98
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
Q+++ F + LS L G +I +
Sbjct: 99 -------QIEESFRVYGRHLKLSRALVYGGVKTFHQI---------------------RA 130
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
L+ VD+LVATPGRL+D + R L+ + V+DE DR+L +LP V ++ +
Sbjct: 131 LKRGVDVLVATPGRLLD-LMEQRALRLDKVEIFVLDEADRML---DMGFLPDVRRIHSAL 186
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
+ R + M+ SATL Q+ +L L
Sbjct: 187 PQKRQT-----------------------------------MLFSATLPQEVRRLISTFL 211
Query: 328 HHPLFL------TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 381
H P+ + TTG+ + L + + K L +LL E+ +VFT +
Sbjct: 212 HDPVHVSVSPPSTTGKN-------IAQKILFVDKENKKALLESLLGDAQIERVLVFTRTK 264
Query: 382 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
+++ LN + RI+ + G + Q R + L+ FR GK +VLV++D + RG+DV+
Sbjct: 265 HGANQVAKRLN---QTRIRAEAIHGNKSQPARLQALEKFRSGKTRVLVATDIVARGLDVD 321
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE------VKRFKKLLQKADN 495
G+ +V+NY+ P ++Y+HR GRTARAG G + E ++R K D
Sbjct: 322 GITHVINYELPKEAESYVHRIGRTARAGATGIALSFCDAGERPYLSRIEREIKSTVDVDT 381
Query: 496 DSCPIHSIPSSLIESLR 512
D P HS + ++ R
Sbjct: 382 DH-PYHSASVAALKGAR 397
>gi|198277297|ref|ZP_03209828.1| hypothetical protein BACPLE_03509 [Bacteroides plebeius DSM 17135]
gi|198269795|gb|EDY94065.1| DEAD/DEAH box helicase [Bacteroides plebeius DSM 17135]
Length = 438
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 187/447 (41%), Gaps = 116/447 (25%)
Query: 39 LKVALQNMGISSLFPVQVA---VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS 95
++ L N+ I L +Q A W+E DL + SPTGSGKTL+Y LP+V +L
Sbjct: 3 IQTILSNLKIDQLNAMQEASIDAWKEG-------SDLILLSPTGSGKTLAYLLPLVSSL- 54
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
+ V ++A+V++P+R+LAL Q
Sbjct: 55 KKGVEGVQAVVLVPSRELAL---------------------------------------Q 75
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
++ VF A+A G V G RP +E ++ + AV +
Sbjct: 76 IEQVFKAMA--TGFPVMSCYG------------GRPAMEE------HRTMKGISPAV--I 113
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGR+ DH+N + F + LV+DE D+ L +Q + V+
Sbjct: 114 IGTPGRMNDHLNK-QNFEAGTVRTLVIDEFDKCLEFGFQDEMAEVI-------------- 158
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
G L +RR + + PR M N+ +LD FL
Sbjct: 159 --------GKLPALRRRFLLSATDAEEIPRFTGM----------NRTLKLD-----FLNP 195
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
ET + +RL Y++ K K L LL +LG E +VF + ES R+ L+
Sbjct: 196 EET---VSQRLSVYRVTSPVKDKLETLYKLLCTLGNESTLVFCNHRESVDRVGKYLH--- 249
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
+++ + + G Q R + L FR G + +S+D RG+D+ + +VV+Y P
Sbjct: 250 SMKVYCETFHGGMEQDDRERALYKFRNGSCHIFISTDLAARGLDIPDIRHVVHYHLPVAE 309
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDE 482
+IHR GRTAR G F +LH +E
Sbjct: 310 DGFIHRNGRTARWEAEGNAFLILHDEE 336
>gi|421498297|ref|ZP_15945417.1| ATP-dependent RNA helicase RhlE [Aeromonas media WS]
gi|407182701|gb|EKE56638.1| ATP-dependent RNA helicase RhlE [Aeromonas media WS]
Length = 417
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 187/460 (40%), Gaps = 111/460 (24%)
Query: 34 CLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT 93
L PRL+ L +G ++ P+Q + I L RDL + TG+GKT ++ LP+++
Sbjct: 10 ALSPRLQQTLCELGYAAPTPIQAS----AIPVILAGRDLLAGAQTGTGKTAAFVLPLLEQ 65
Query: 94 L----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLL 149
L + R +RALV++PTR+LA+QV + +Y
Sbjct: 66 LMQQPQGESPRPIRALVLVPTRELAVQVFESVVRY------------------------- 100
Query: 150 FISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQ 209
L+ L G SIA ++ + L+
Sbjct: 101 --------------GQGTDLTSALVYGGVSIAAQV---------------------EALK 125
Query: 210 SAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE 269
+ VD+L+ATPGRL+DH+ L L +LV DE DR+L + + +L+ +D +
Sbjct: 126 NGVDLLIATPGRLLDHLRQG-ALRLGSLSHLVFDEADRMLDMGFMDEIKALLKQIPADRQ 184
Query: 270 NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHH 329
A T + F K + R P L+++ P ++
Sbjct: 185 TLLFSA-TCDDNLFALSKVLLRD-----------PELIEVA--------PRNTTAAEVEQ 224
Query: 330 PLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCT 389
++ G+ + L E + + K G ++F+ + + +L
Sbjct: 225 RVYAVDGDRKLALVEHMLTVK-------------------GWAPALIFSRTRQGADKLAQ 265
Query: 390 LLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNY 449
L G I + G QS R K L FR G +Q LV++D RG+D+ +N V+N
Sbjct: 266 QLGKAG---INALAFHGDLSQSAREKVLLEFRAGTLQALVATDVAARGLDISDLNYVINL 322
Query: 450 DKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
+ P + Y+HR GRT RAG G TL ++ +K+
Sbjct: 323 EFPFVAEDYVHRIGRTGRAGNKGLAITLFSPEDAPLLEKV 362
>gi|283784562|ref|YP_003364427.1| ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
gi|282948016|emb|CBG87580.1| putative ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
Length = 451
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 197/469 (42%), Gaps = 121/469 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + A+ G PVQ Q+ I L RDL ++ TG+GKT + LP++Q L
Sbjct: 8 LNPEILRAIAEQGYREPTPVQ----QQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63
Query: 95 -----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSL 148
+ R +RAL++ PTR+LA Q+ Y NI L+
Sbjct: 64 ITQQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLV--------------- 108
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
VF + SI ++ KL G+ DVL
Sbjct: 109 ----------VFGGV---------------SINPQMM------KLRGGV-----DVL--- 129
Query: 209 QSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
VATPGRL+D H NA + L+ + LV+DE DR+L
Sbjct: 130 -------VATPGRLLDLEHQNAVK---LDQIEILVLDEADRML----------------- 162
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
G + IRR P R ++ SAT + D +LA+
Sbjct: 163 ---------------DMGFIHDIRRV-----LAKLPAKRQ-NLLFSATFSDDIKRLAEKL 201
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
LH+PL + R E++ + + K K L ++ ++ +VFT + +
Sbjct: 202 LHNPLEIEVAR-RNTASEQVTQHVHFVDKKRKRELLSQMIGQGNWQQVLVFTRTKHGANH 260
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LN G I+ G + Q R++ L F+ G I+VLV++D RG+D+E + +V
Sbjct: 261 LAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHV 317
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK 492
VNY+ P + Y+HR GRT RA G +L+ DE ++ +KLL+K
Sbjct: 318 VNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|398978771|ref|ZP_10688050.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
gi|398136766|gb|EJM25846.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
Length = 492
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 210/525 (40%), Gaps = 130/525 (24%)
Query: 6 KKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP 65
K PV+PW V E H L P L A+Q++G P+Q V +G
Sbjct: 80 KPKAPVIPWKLEDFVVEPQEGKTRFHDFKLSPELMHAIQDLGFPYCTPIQAQV----LGF 135
Query: 66 GLFERDLCINSPTGSGKTLSYALPIVQTL------SNRAVRCLRALVVLPTRDLALQVNS 119
L +D + TG+GKT ++ + I+ L R + RAL++ PTR+L +Q+
Sbjct: 136 TLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQI-- 193
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
KD A + GL+V VG
Sbjct: 194 ------------------------------------AKDA-ADLTKYTGLNVMTFVGGMD 216
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
++ L EA C DILVATPGRL+D N L+ +
Sbjct: 217 FDKQLKHL------EARHC--------------DILVATPGRLLD-FNQRGDVHLDMVEV 255
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
+V+DE DR+L + +P V Q+ R S+ T L SA F
Sbjct: 256 MVLDEADRMLDMGF---IPQVRQIIRQTPPK--SERQTLLFSAT--------------FT 296
Query: 300 DKPYPRLVKMVLSATLTQDP-------NKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
D M L+ T DP +A ++ ++ G +YKL
Sbjct: 297 DD------VMNLAKQWTTDPAIVEIEVTNVANENVEQHIYAVAGADKYKL---------- 340
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
L L+ G E+ IVF + + R+ L G I + SG Q
Sbjct: 341 ---------LFNLVNDNGWERVIVFANRKDEVRRIEERLVRDG---INAAQLSGDVPQHK 388
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R KTL+ FREGKI+VLV++D RG+ ++G+++V+N+ P Y+HR GRT RAG G
Sbjct: 389 RIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADG 448
Query: 473 RCFTLLHKDEVKRF----KKLLQKADNDSCPIHSIPSSLIESLRP 513
+ +D+ + +KL +K ++ P H + +E RP
Sbjct: 449 VSISFAGEDDSYQLPSIEEKLGRKISCETPPTHLL--RAVERKRP 491
>gi|170592549|ref|XP_001901027.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591094|gb|EDP29707.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 452
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 160/327 (48%), Gaps = 50/327 (15%)
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
KRP L A D + L+ DI++ATPGRL+DH++ F+L + LV+DE DR+
Sbjct: 13 KRPMLLANGGLDLKTQEAALRQRPDIVIATPGRLIDHLHNAPNFSLADVEILVLDEADRM 72
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVK 308
L EA+ + ++ L C R
Sbjct: 73 LDEAFSIQMKEIMHL----------------------------CARNRQ----------T 94
Query: 309 MVLSATLTQDPNKLAQLDLHHPLFL-TTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
M+ SAT+T +LA + L +P+ L +G T L R E ++ + +VA L
Sbjct: 95 MLFSATMTDQIEELAAVSLKNPVKLFISGNTETALNLRQEFVRIRENHEADRECIVAGLV 154
Query: 368 SLG-EEKCIVFTSSVESTHRLCTLLNHFGELRIKIKE-YSGL-QRQSVRSKTLKAFREGK 424
+ + I+F + ++ RL +L G L K+ + +SGL QRQ V + L F++ +
Sbjct: 155 TRNFPDHTIIFVKTKKTCRRLHIVL---GLLGAKVGQLHSGLTQRQRV--EALFRFKKAE 209
Query: 425 IQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
+ VLVS+D RG+DVEGV V+N D P +K YIHR GRTARAG++GR +L+ + E K
Sbjct: 210 LDVLVSTDLAARGLDVEGVKTVINMDMPTTLKQYIHRVGRTARAGRVGRSISLVGESERK 269
Query: 485 RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+++ D + + IESL
Sbjct: 270 ILKEIVASNKEDVIDAY---KNRIESL 293
>gi|90416628|ref|ZP_01224559.1| putative ATP-dependent RNA helicase RhlE [gamma proteobacterium
HTCC2207]
gi|90331827|gb|EAS47055.1| putative ATP-dependent RNA helicase RhlE [gamma proteobacterium
HTCC2207]
Length = 549
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 200/484 (41%), Gaps = 120/484 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS--NRAV 99
A+ G + P+Q + I L RD+ + TG+GKT + LPI+Q LS RA
Sbjct: 16 AITAQGYDTPSPIQA----KAIPAVLDGRDVMAAAQTGTGKTAGFTLPILQLLSAGKRAQ 71
Query: 100 -RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKD 158
+R L++ PTR+LA QV +
Sbjct: 72 PNQVRTLILTPTRELAA---------------------------------------QVGE 92
Query: 159 VFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVAT 218
A + LS + G G+ +P+ + +L+ VD+LVAT
Sbjct: 93 SVATYGKHMSLSSAVVFG-------------------GVKINPQ--MMKLRRGVDVLVAT 131
Query: 219 PGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 278
PGRLMD + + +L LV+DE DR+L + + ++ L
Sbjct: 132 PGRLMD-LYSQNAVKFTYLEVLVLDEADRMLDMGFIHDIKRIISL--------------- 175
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 338
LP R ++ SAT + D KLA+ +H+P+ ++
Sbjct: 176 LPK-----------------------RRQNLMFSATFSDDIRKLAKGLVHNPIEISVTPR 212
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
P +S + K K L L+ + +VFT + ++L L G +
Sbjct: 213 NATAPTVTQSI-YTVDKKQKAGVLTRLIHDNKWGQALVFTKTKHGANKLTKHLEAEGIVA 271
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
I G + Q R+K L F+ G++++LV++D RG+D+E + VVN+D P + Y
Sbjct: 272 AAIH---GNKSQGARTKALAGFKAGEVRILVATDIAARGLDIEQLPQVVNFDLPNVAEDY 328
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEV-------KRFKKLLQKADNDSC-PIHSIPSSLIES 510
+HR GRT RAG G +L+ DEV + +KLL + D P H +P + ++
Sbjct: 329 VHRIGRTGRAGSTGTAISLVSADEVDLLSDIERLTQKLLPREVMDGFEPSHDVPETFLD- 387
Query: 511 LRPV 514
RPV
Sbjct: 388 -RPV 390
>gi|157146569|ref|YP_001453888.1| ATP-dependent RNA helicase RhlE [Citrobacter koseri ATCC BAA-895]
gi|157083774|gb|ABV13452.1| hypothetical protein CKO_02330 [Citrobacter koseri ATCC BAA-895]
Length = 454
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 197/469 (42%), Gaps = 121/469 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + A+ G P+Q Q+ I L RDL ++ TG+GKT + LP++Q L
Sbjct: 8 LNPDILRAIAEQGYREPTPIQ----QQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63
Query: 95 -----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSL 148
+ R +RAL++ PTR+LA Q+ Y NI L+
Sbjct: 64 ITQQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLV--------------- 108
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
VF + SI ++ KL G+ DVL
Sbjct: 109 ----------VFGGV---------------SINPQMM------KLRGGV-----DVL--- 129
Query: 209 QSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
VATPGRL+D H NA + L+ + LV+DE DR+L
Sbjct: 130 -------VATPGRLLDLEHQNAVK---LDQIEILVLDEADRML----------------- 162
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
G + IRR K P+ ++ SAT + D LA+
Sbjct: 163 ---------------DMGFIHDIRRVLA------KLPPKRQNLLFSATFSDDIKALAEKL 201
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
LH+PL + R E++ + + K K L ++ ++ +VFT + +
Sbjct: 202 LHNPLEIEVAR-RNTASEQVTQHVHFVDKKRKRELLSQMIGKGNWQQVLVFTRTKHGANH 260
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LN G I+ G + Q R++ L F+ G I+VLV++D RG+D+E + +V
Sbjct: 261 LAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHV 317
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK 492
VNY+ P + Y+HR GRT RA G +L+ DE ++ +KLL+K
Sbjct: 318 VNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 203/493 (41%), Gaps = 100/493 (20%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A++ G + P+Q+A I GL +RD+ + TGSGKT ++ LP++ +
Sbjct: 217 LSPELLKAVERAGYKTPSPIQMAA----IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 272
Query: 95 S-------NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
S A+V+ PTR+LA Q+ K+
Sbjct: 273 SRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKF----------------------- 309
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
A +G+ V VG SI E G
Sbjct: 310 ----------------AHYLGIKVVSIVGGQSIE------------EQGF---------R 332
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
++ ++++ATPGRL+D + R L Y+V+DE DR++ ++ + VL S
Sbjct: 333 IRQGCEVVIATPGRLIDCLE-RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 391
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
N ++ + +K R M SAT+ +LA+ L
Sbjct: 392 N--------------------LKPENEDEELDEKKIYRTTYM-FSATMPPAVERLARKYL 430
Query: 328 HHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
+P+ +T G T K + + + ++ + K L LL LG++ IVF ++ +ST L
Sbjct: 431 RNPVVVTIG-TAGKATDLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTL 489
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
L+ G ++ G + Q R +L+ FR + VLV++D RG+D+ V +V+
Sbjct: 490 AKGLDKAG---YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 546
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSL 507
NYD P I+ Y HR GRT RAG+ G T L + F L Q + P +P L
Sbjct: 547 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQSNSP---VPPEL 603
Query: 508 IESLRPVYKSGDV 520
+K G +
Sbjct: 604 ARHEASKFKPGSI 616
>gi|167539739|ref|XP_001741236.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165894254|gb|EDR22313.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 406
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 182/439 (41%), Gaps = 120/439 (27%)
Query: 80 SGKTLSYALPIVQTL-----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIA 134
SGKT S+ LP++Q L NRA C+ ++ PTR+LA
Sbjct: 43 SGKTASFLLPMIQHLLNVKEKNRAFYCI---IIEPTRELA-------------------- 79
Query: 135 DHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPKL 193
QV +V I A+ GL L VG + + +L KRP
Sbjct: 80 -------------------AQVVEVLDEIGKALPGLMSCLLVGGMDVMKQSVQLAKRP-- 118
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF--TLEHLCYLVVDETDRLLRE 251
++V TPGR++ HI T+G +++ + +LV+DE D+LL
Sbjct: 119 -------------------HVIVGTPGRIVYHIKNTKGVEESIQKVKFLVIDEADKLL-- 157
Query: 252 AYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVL 311
E F++ +L S +T M+
Sbjct: 158 -----------------EMDFANEIDYLIEKLPSQRTT-------------------MLF 181
Query: 312 SATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGE 371
SAT++ KL + L HP+ + E +Y+ + L K + YL+++L+
Sbjct: 182 SATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEYCFIPFKYRDGYLLSILKETEG 241
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ I+FT +L +L G I + G Q R L+ F+ GK +LV++
Sbjct: 242 KSIIIFTMKCSGCTKLVMMLRQLGYAAIPL---HGKMSQQKRLIALEKFKSGKRGILVAT 298
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF----- 486
D +RG+D+ V+ V+NYD P K YIHR GRTARAG+ G TL+ + ++ +
Sbjct: 299 DVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAGKSGYAITLVTQYSIELYQRIET 358
Query: 487 ---KKLLQKADNDSCPIHS 502
KKL + ND+ I S
Sbjct: 359 MIEKKLNEYKANDAMRIVS 377
>gi|312070907|ref|XP_003138363.1| hypothetical protein LOAG_02778 [Loa loa]
Length = 463
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 48/310 (15%)
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
DI++ATPGRL+DH++ F+L ++ LV+DE DR+L EA+ + ++ L
Sbjct: 43 DIVIATPGRLIDHLHNAPNFSLVNVEILVLDEADRMLDEAFADQMKEIIHL--------- 93
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
C R M+ SAT+T +LA + L +P+
Sbjct: 94 -------------------CAQNRQ----------TMLFSATMTDQVEELAAVSLKNPVK 124
Query: 333 L-TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLG-EEKCIVFTSSVESTHRLCTL 390
L TG T L R E ++ + +VA L + + I+F + + RL +
Sbjct: 125 LFITGNTETALNLRQEFVRIRESHETDRECIVAGLVTRNFPDHTIIFVKTKRTCRRLHIV 184
Query: 391 LNHFGELRIKIKE-YSGL-QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 448
L G +K+ + +SGL QRQ V + L F++ ++ VLVS+D RG+DVEGV V+N
Sbjct: 185 LGLLG---VKVGQLHSGLTQRQRV--EALFRFKKAELDVLVSTDLAARGLDVEGVKTVIN 239
Query: 449 YDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS-IPSSL 507
D P+ +K Y+HR GRTARAG++GR +L+ + E K K+++ C I +++
Sbjct: 240 MDMPSTLKQYVHRVGRTARAGRVGRSISLVGESERKILKEIIASNKGGGCLKQRLISANV 299
Query: 508 IESLRPVYKS 517
+E+ + +S
Sbjct: 300 VEAYKNRIES 309
>gi|389774439|ref|ZP_10192558.1| DNA/RNA helicase [Rhodanobacter spathiphylli B39]
gi|388438038|gb|EIL94793.1| DNA/RNA helicase [Rhodanobacter spathiphylli B39]
Length = 638
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 195/448 (43%), Gaps = 107/448 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P + AL ++G S P+Q A TI P + RD+ + TG+GKT ++ALPI+ +
Sbjct: 20 LHPDVLRALADVGYESPSPIQAA----TIPPLMEGRDVLGQAQTGTGKTAAFALPILSRI 75
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ + +ALV+ PTR+LA+QV A KY ++ GL
Sbjct: 76 DLKPGKP-QALVLAPTRELAIQVAEAFQKYAT-HMRGL---------------------- 111
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
QV ++ GQS Y P+ L L+ V +
Sbjct: 112 QVLPIYG--------------GQS--------------------YGPQ--LHSLKRGVHV 135
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+V TPGR++DH++ L L YLV+DE D +LR + + VLQ T +
Sbjct: 136 VVGTPGRVIDHLDKGT-LDLSELKYLVLDEADEMLRMGFIDDVEKVLQATPPQRQVALFS 194
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
A ++ T+ R +R KD V++ + ++ T N +H +
Sbjct: 195 A---------TMPTVIRKIAQRHLKDP-----VEVTIKSSTTTAAN------IHQRYWFV 234
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+G +KL L +L++ + I+F + ++T L L
Sbjct: 235 SG-----------MHKLDA--------LTRILEAEPFDAMIIFARTKQATEELAGKLQAR 275
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + +G Q R + ++ ++GK+ +LV++D RG+DVE +++V NYD P
Sbjct: 276 G---LAAAAINGDIAQPQRERVIQQLKDGKLDILVATDVAARGLDVERISHVFNYDIPYD 332
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDE 482
++Y+HR GRT RAG+ G + E
Sbjct: 333 TESYVHRIGRTGRAGRSGEAILFVSPRE 360
>gi|375147728|ref|YP_005010169.1| DEAD/DEAH box helicase [Niastella koreensis GR20-10]
gi|361061774|gb|AEW00766.1| DEAD/DEAH box helicase domain protein [Niastella koreensis GR20-10]
Length = 563
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 202/476 (42%), Gaps = 115/476 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFE--RDLCINSPTGSGKTLSYALPIVQ 92
LD RL A +G + P+Q E P L +DL + TG+GKT ++ LP++
Sbjct: 9 LDERLIQATNALGYVNPTPIQ-----EQAIPVLLSGTKDLVGLAQTGTGKTAAFGLPLLH 63
Query: 93 TLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFIS 152
L N ++ +ALVV PTR+L +Q+ + G
Sbjct: 64 -LVNEQLKHPQALVVCPTRELCMQI--------VNEVEG--------------------- 93
Query: 153 LPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV 212
F P G+ V G + I +I +EL+ V
Sbjct: 94 -------FKKFIP--GMFVAAVYGGAPIGQQI---------------------RELRRGV 123
Query: 213 DILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRF 272
I+VATPGRL+D I + LE + Y+++DE D +L +Q + +L+ T E +
Sbjct: 124 QIVVATPGRLIDLIE-RKAIDLEQIQYVILDEADEMLNMGFQDDIEFILKNT-PKREATW 181
Query: 273 SDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLF 332
++T P IRR +R KD P V V SA NK ++ H +
Sbjct: 182 LFSATMPPE-------IRRVS-KRYMKD-PIEVTVGKVNSA------NK----NIDHQYY 222
Query: 333 LTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
LT+ + RY+ +RL + +Y I+FT + + L
Sbjct: 223 LTSAQHRYEALKRLIDFN-------PGIY------------GIIFTRTKADAQDIAEKLT 263
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G I G Q R K + FRE +Q+L+++D RG+DV+G+ +V+NY+ P
Sbjct: 264 REG---YDIDALHGDLTQQQRDKVMGDFREKTLQLLIATDVAARGIDVQGITHVINYELP 320
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIH--SIPSS 506
++ Y HR+GRT RAG+ G C +++H V+ K+ Q P H IP+
Sbjct: 321 DDVEVYTHRSGRTGRAGKTGVCMSIVH---VRELGKMRQIQTIVQAPFHKLEIPTG 373
>gi|182413406|ref|YP_001818472.1| DEAD/DEAH box helicase [Opitutus terrae PB90-1]
gi|177840620|gb|ACB74872.1| DEAD/DEAH box helicase domain protein [Opitutus terrae PB90-1]
Length = 403
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 189/453 (41%), Gaps = 115/453 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L L A+Q M P+Q + G D+ ++ TG+GKT ++ALPI+Q L
Sbjct: 10 LQDALAYAVQKMDYVEPTPIQAQAIPIVLKGG----DVIGSAQTGTGKTAAFALPIIQRL 65
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
S LR L++ PTR+LALQV
Sbjct: 66 STHG--RLRCLILEPTRELALQV------------------------------------- 86
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ F A L V + G G+ Y + +L+ +DI
Sbjct: 87 --EEAFHKFAKFTDLRVTIVYG-------------------GVGYGKQ--TSDLKRGMDI 123
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L ATPGRL+DH+ +LE + LV+DE DR+L +LP V
Sbjct: 124 LAATPGRLLDHLGQGN-CSLEDVEILVLDEVDRMLD---MGFLPDVR------------- 166
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
K ++RC P R + SATL + +LA LH+P +
Sbjct: 167 ------------KIVQRC---------PKARQT-LFFSATLPPELEQLAGWALHNPTKVE 204
Query: 335 TGETRYKLPERLES---YKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 391
G R + P S Y ++ K L L LL+ + ++F + R+ L
Sbjct: 205 IG--RVRSPAETVSHGFYPVVASQKFDLLQL--LLERTEFKSVLIFCRTRMGADRIAHRL 260
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
G + + QR+ R + L F+ GK +VLV++D RG+D+ GV++V+NYD
Sbjct: 261 KTKGHT-VGVMHSDRSQRE--RIEALDGFKSGKFEVLVATDIAARGLDIAGVSHVINYDV 317
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVK 484
P + Y+HR GRT RA G FTL+ +++V+
Sbjct: 318 PENPEDYVHRIGRTGRAHHTGDAFTLVTEEDVR 350
>gi|306821248|ref|ZP_07454862.1| ATP-dependent RNA helicase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304550760|gb|EFM38737.1| ATP-dependent RNA helicase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 517
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 193/445 (43%), Gaps = 112/445 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTLSNRAVR 100
A+ MG + +Q E I P + D+ S TG+GKT+++ +P++Q L +
Sbjct: 16 AIDAMGFEDMTQIQ-----EKIVPVAVNKCDVIGQSQTGTGKTVAFGIPLIQNLDFDEEK 70
Query: 101 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 160
++++++ PTR+LA+QV + + + LL LP
Sbjct: 71 -IQSVIMTPTRELAIQVTA------------------------EINRLLRF-LP------ 98
Query: 161 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 220
AV L G +EI+ IKR L+ I+VATPG
Sbjct: 99 ---TKAVALYGG---------EEITRQIKR-----------------LKDRPAIIVATPG 129
Query: 221 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 280
RLMDHI R E++ +V+DE D +L + + +L+ +P
Sbjct: 130 RLMDHIRR-RTVKTEYINTVVLDEADEMLSMGFVEDIEEILEQ---------------MP 173
Query: 281 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 340
+ R + M+ SAT+ K+++ L PLF+
Sbjct: 174 N-----------------------RSITMLFSATMPDRIKKISEKFLKDPLFVKVERKTL 210
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-I 399
+ + Y I ES K L LL CI+F + L + L +LR
Sbjct: 211 TVDSIDQKYIQIQESD-KFDALCRLLDIYQPPLCIIFGRTKRRVDELISGL----QLRDY 265
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
K++ G +Q R K L+ F++G I++LV++D RG+D+ GV +V+N+D P I+ Y+
Sbjct: 266 KVEGIHGDMKQDRREKVLERFKKGNIRILVATDVAARGLDISGVTHVINFDLPQEIEGYV 325
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVK 484
HR GRT RAG+ G FT +H E++
Sbjct: 326 HRIGRTGRAGKSGVSFTFVHPKEME 350
>gi|398930681|ref|ZP_10664746.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
gi|398164991|gb|EJM53115.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
Length = 496
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 211/520 (40%), Gaps = 120/520 (23%)
Query: 6 KKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP 65
K PV+PW V E H L P L A+Q++G P+Q V +G
Sbjct: 84 KPKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQDLGFPYCTPIQAQV----LGF 139
Query: 66 GLFERDLCINSPTGSGKTLSYALPIVQTL------SNRAVRCLRALVVLPTRDLALQVNS 119
L +D + TG+GKT ++ + I+ L R + RAL++ PTR+L +Q+
Sbjct: 140 TLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQI-- 197
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
KD A + GL+V VG
Sbjct: 198 ------------------------------------AKDA-ADLTKYTGLNVMTFVGGMD 220
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
++ L EA C DILVATPGRL+D N L+ +
Sbjct: 221 FDKQLKHL------EARHC--------------DILVATPGRLLD-FNQRGDVHLDMVEV 259
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
+V+DE DR+L + +P V Q+ R +
Sbjct: 260 MVLDEADRMLDMGF---IPQVRQIIR---------------------------------Q 283
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES--YKLICESKL 357
P ++ SAT T+D LA+ P + E++ E +E Y + K
Sbjct: 284 TPPKAERQTLLFSATFTEDVMNLAKQWTTDPSIVEI-ESQNVANENVEQHIYAVAGADKY 342
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K LY L+ G E+ IVF + + R+ L G I + SG Q R KTL
Sbjct: 343 KLLY--NLVNDNGWERVIVFANRKDEVRRIEERLVRDG---INAAQLSGDVPQHKRIKTL 397
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
+ FREGKI+VLV++D RG+ ++G+++V+N+ P Y+HR GRT RAG G +
Sbjct: 398 EGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISF 457
Query: 478 LHKDEVKRF----KKLLQKADNDSCPIHSIPSSLIESLRP 513
+D+ + +KL +K ++ P H + +E RP
Sbjct: 458 AGEDDSYQLPSIEEKLGRKISCETPPTHLL--RAVERKRP 495
>gi|417539031|ref|ZP_12191433.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353665295|gb|EHD03472.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 453
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 197/471 (41%), Gaps = 125/471 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + A+ G P+Q Q+ I L RDL ++ TG+GKT + LP++Q L
Sbjct: 8 LNPDILRAIAEQGYREPTPIQ----QQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63
Query: 95 -----SNRAVRCLRALVVLPTRDLALQVNS---ARCKYCCKNIFGLIADHSIAEMCVQFD 146
+ R +RAL++ PTR+LA Q+ A KY NI L+
Sbjct: 64 ITHQPHAKGRRPVRALILTPTRELAAQIGENVRAYSKYL--NIRSLV------------- 108
Query: 147 SLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQ 206
VF + SI ++ KL G+
Sbjct: 109 ------------VFGGV---------------SINPQMM------KLRGGV--------- 126
Query: 207 ELQSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 264
D+LVATPGRL+D H NA + L+ + LV+DE DR+L
Sbjct: 127 ------DVLVATPGRLLDLEHQNAVK---LDQIEILVLDEADRML--------------- 162
Query: 265 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 324
G + IRR P R ++ SAT + D LA+
Sbjct: 163 -----------------DMGFIHDIRRV-----LAKLPAKRQ-NLLFSATFSDDIKALAE 199
Query: 325 LDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 384
L +PL + R E++ + + K K L ++ ++ +VFT +
Sbjct: 200 KLLRNPLEIEVAR-RNTASEQVTQHVHFVDKKRKRELLSQMIGQGNWQQVLVFTRTKHGA 258
Query: 385 HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 444
+ L LN G I+ G + Q R++ L F+ G I+VLV++D RG+D+E +
Sbjct: 259 NHLAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELP 315
Query: 445 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK 492
+VVNY+ P + Y+HR GRT RA G +L+ DE ++ +KLL+K
Sbjct: 316 HVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|294056345|ref|YP_003550003.1| DEAD/DEAH box helicase [Coraliomargarita akajimensis DSM 45221]
gi|293615678|gb|ADE55833.1| DEAD/DEAH box helicase domain protein [Coraliomargarita akajimensis
DSM 45221]
Length = 465
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 213/506 (42%), Gaps = 130/506 (25%)
Query: 29 LDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-DLCINSPTGSGKTLSYA 87
LP +P ++ AL + G ++ P+Q P L E DL + TG+GKT ++A
Sbjct: 6 FQELPLAEP-IQRALSDKGYTTPSPIQARAI-----PVLLEGGDLLACAQTGTGKTAAFA 59
Query: 88 LPIVQTLSNRAV----RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCV 143
LP++ ++ R R +R LV+ PTR+LA+QV +N F L H +
Sbjct: 60 LPLLHGIAERPRKPFRRGVRHLVLTPTRELAVQV--------AEN-FELYGKH------I 104
Query: 144 QFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPED 203
+F S++ G+ P+
Sbjct: 105 KFRSMMVY-------------------------------------------GGVSEKPQ- 120
Query: 204 VLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQL 263
++ L VD+LVA PGRL+D ++ L + ++DE DR+L
Sbjct: 121 -IKTLFQGVDVLVACPGRLIDLMDQGH-VDLSQVETFILDEADRML-------------- 164
Query: 264 TRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLA 323
G ++ IR+ + K + ++ SAT+ + KL
Sbjct: 165 ------------------DMGFIRDIRKIAAKLPKKRQ------TLLFSATMAPEITKLG 200
Query: 324 QLDLHHPLFLT---TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK----CIV 376
LH P + G T K+ + L K KP L+ +L +E+ +V
Sbjct: 201 HAMLHQPAEIRIAPQGTTADKVDQSL----CFIGKKAKPKLLLEMLHRRFDEQPNELSLV 256
Query: 377 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 436
FT + L LN G +K G + QS R KTL+ +R G+I +LV++D R
Sbjct: 257 FTRTKHGAKNLAKKLNGEG---LKADAIHGNKSQSAREKTLERYRRGEIDILVATDVAAR 313
Query: 437 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV---KRFKKLLQKA 493
G+DV+ + V+N+D P Y+HR GRTARAG G + ++EV ++ ++L++K
Sbjct: 314 GIDVKNITLVINFDLPMEADAYVHRIGRTARAGASGHAVSFCSEEEVALLRQIERLIKKT 373
Query: 494 --DNDSCPIHSIPS-SLIESLRPVYK 516
++S P H + L S RPV K
Sbjct: 374 VPVDESHPFHDADAMELHLSRRPVKK 399
>gi|339998715|ref|YP_004729598.1| ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC 12419]
gi|339512076|emb|CCC29797.1| putative ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC
12419]
Length = 451
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 197/469 (42%), Gaps = 121/469 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P + A+ G P+Q Q+ I L RDL ++ TG+GKT ++LP++Q L
Sbjct: 8 LHPDILRAIAGQGYREPTPIQ----QQAIPAVLEGRDLMASAQTGTGKTAGFSLPLLQHL 63
Query: 95 -----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSL 148
+ R +RAL++ PTR+LA Q+ Y NI L+
Sbjct: 64 ITQQPHAKGRRPVRALILTPTRELAAQIGENIRDYSQYLNIRSLV--------------- 108
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
VF + SI ++ KL G+ DVL
Sbjct: 109 ----------VFGGV---------------SINPQMM------KLRGGV-----DVL--- 129
Query: 209 QSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
VATPGRL+D H NA + L+ + LV+DE DR+L
Sbjct: 130 -------VATPGRLLDLEHQNAVK---LDQVEILVLDEADRML----------------- 162
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
G + IRR K P+ ++ SAT + D LA+
Sbjct: 163 ---------------DMGFIHDIRRVLA------KLPPKRQNLLFSATFSDDIKALAEKL 201
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
LH+PL + R E++ + + K K L ++ ++ +VFT + +
Sbjct: 202 LHNPLEIEVAR-RNTASEQVTQHVHFVDKKRKRELLSQMIGQGNWQQVLVFTRTKHGANH 260
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LN G I+ G + Q R++ L F+ G I+VLV++D RG+D+E + +V
Sbjct: 261 LAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHV 317
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK 492
VNY+ P + Y+HR GRT RA G +L+ DE ++ +KLL+K
Sbjct: 318 VNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKK 366
>gi|406603762|emb|CCH44787.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 435
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 185/429 (43%), Gaps = 107/429 (24%)
Query: 73 CIN-SPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFG 131
CI + TGSGKT+++ P++ S + LV+ PTR+LALQ
Sbjct: 35 CIGGAKTGSGKTIAFGAPMLTKWSEDPMGIF-GLVLTPTRELALQ--------------- 78
Query: 132 LIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRP 191
IAE FAA+ A+ + + + VG S+ ++ +L +P
Sbjct: 79 ------IAEQ------------------FAALGAAMNIRIAVIVGGESMVEQAIKLQGKP 114
Query: 192 KLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC---YLVVDETDRL 248
++ATPGRL DHI + T+E L YLV+DE DRL
Sbjct: 115 HF---------------------VIATPGRLADHILNSGEDTIEGLKRVRYLVLDEADRL 153
Query: 249 LREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS---LKTIRRCGVERGFKDKPYPR 305
L ++ SD + FS LPSA L T R KD+P P
Sbjct: 154 LSNSFG-----------SDLQRCFS----ILPSADKRQTLLFTATVTDAVRALKDRPTP- 197
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVAL 365
T P +L +H + +P +LE+Y ++ S +K YL ++
Sbjct: 198 ----------TNKP----KLFIHE----VDSVDKVAIPSQLETYFMLVPSYVKESYLYSI 239
Query: 366 LQSLGEEK--CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREG 423
L EK +VF V TH + L I++ Q R+ +L FR
Sbjct: 240 LSHEDNEKKTAMVF---VNRTHTAEVVRRTLRNLEIRVASLHSELPQQERTNSLHRFRAN 296
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEV 483
+VL+++D +RG+D+ V V+NYD PA ++HR GRTARAG+ G+ +L+ + +V
Sbjct: 297 AARVLIATDVASRGLDIPDVELVINYDIPADPDDFVHRVGRTARAGRKGQTISLVSEKDV 356
Query: 484 KRFKKLLQK 492
R + + ++
Sbjct: 357 SRIQAIEER 365
>gi|402309844|ref|ZP_10828816.1| DEAD/DEAH box helicase [Eubacterium sp. AS15]
gi|400370387|gb|EJP23373.1| DEAD/DEAH box helicase [Eubacterium sp. AS15]
Length = 517
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 193/445 (43%), Gaps = 112/445 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFER-DLCINSPTGSGKTLSYALPIVQTLSNRAVR 100
A+ MG + +Q E I P + D+ S TG+GKT+++ +P++Q L +
Sbjct: 16 AIDAMGFEDMTQIQ-----EKIVPVAVNKCDVIGQSQTGTGKTVAFGIPLIQNLDFDEEK 70
Query: 101 CLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVF 160
++++++ PTR+LA+QV + + + LL LP
Sbjct: 71 -IQSVIMTPTRELAIQVTA------------------------EINRLLRF-LP------ 98
Query: 161 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 220
AV L G +EI+ IKR L+ I+VATPG
Sbjct: 99 ---TKAVALYGG---------EEITRQIKR-----------------LKDRPAIIVATPG 129
Query: 221 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 280
RLMDHI R E++ +V+DE D +L + + +L+ +P
Sbjct: 130 RLMDHIRR-RTVKTEYINTVVLDEADEMLSMGFVEDIEEILEQ---------------MP 173
Query: 281 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 340
+ R + M+ SAT+ K+++ L PLF+
Sbjct: 174 N-----------------------RSITMLFSATMPDRIKKISEKFLKDPLFVRVERKTL 210
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR-I 399
+ + Y I ES K L LL CI+F + L + L +LR
Sbjct: 211 TVDSIDQKYIQIQESD-KFDALCRLLDIYQPPLCIIFGRTKRRVDELISGL----QLRDY 265
Query: 400 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 459
K++ G +Q R K L+ F++G I++LV++D RG+D+ GV +V+N+D P I+ Y+
Sbjct: 266 KVEGIHGDMKQDRREKVLERFKKGNIRILVATDVAARGLDISGVTHVINFDLPQEIEGYV 325
Query: 460 HRAGRTARAGQLGRCFTLLHKDEVK 484
HR GRT RAG+ G FT +H E++
Sbjct: 326 HRIGRTGRAGKSGVSFTFVHPKEME 350
>gi|398872243|ref|ZP_10627544.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
gi|398203843|gb|EJM90658.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
Length = 496
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 211/520 (40%), Gaps = 120/520 (23%)
Query: 6 KKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGP 65
K PV+PW V E H L P L A+Q++G P+Q V +G
Sbjct: 84 KPKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQDLGFPYCTPIQAQV----LGF 139
Query: 66 GLFERDLCINSPTGSGKTLSYALPIVQTL------SNRAVRCLRALVVLPTRDLALQVNS 119
L +D + TG+GKT ++ + I+ L R + RAL++ PTR+L +Q+
Sbjct: 140 TLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQI-- 197
Query: 120 ARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSS 179
KD A + GL+V VG
Sbjct: 198 ------------------------------------AKDA-ADLTKYTGLNVMTFVGGMD 220
Query: 180 IADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCY 239
++ L EA C DILVATPGRL+D N L+ +
Sbjct: 221 FDKQLKHL------EARHC--------------DILVATPGRLLD-FNQRGDVHLDMVEV 259
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
+V+DE DR+L + +P V Q+ R +
Sbjct: 260 MVLDEADRMLDMGF---IPQVRQIIR---------------------------------Q 283
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLES--YKLICESKL 357
P ++ SAT T+D LA+ P + E++ E +E Y + K
Sbjct: 284 TPPKSERQTLLFSATFTEDVMNLAKQWTTDPSIVEI-ESQNVANENVEQHIYAVAGADKY 342
Query: 358 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTL 417
K LY L+ G E+ IVF + + R+ L G I + SG Q R KTL
Sbjct: 343 KLLY--NLVNDNGWERVIVFANRKDEVRRIEERLVRDG---INAAQLSGDVPQHKRIKTL 397
Query: 418 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 477
+ FREGKI+VLV++D RG+ ++G+++V+N+ P Y+HR GRT RAG G +
Sbjct: 398 EGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISF 457
Query: 478 LHKDEVKRF----KKLLQKADNDSCPIHSIPSSLIESLRP 513
+D+ + +KL +K ++ P H + +E RP
Sbjct: 458 AGEDDSYQLPSIEEKLGRKISCETPPTHLL--RAVERKRP 495
>gi|336373626|gb|EGO01964.1| hypothetical protein SERLA73DRAFT_49383 [Serpula lacrymans var.
lacrymans S7.3]
Length = 474
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 192/473 (40%), Gaps = 94/473 (19%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P +L + D L P L AL M I + +QVA I P L RD N+
Sbjct: 32 PNTPTLHQSFSFDDLNISSPLL-AALSRMSIRTPTEIQVAC----IPPLLSGRDCIGNAK 86
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHS 137
TGSGKT+++ALPI+Q LS ALV+ PTR+LA Q++
Sbjct: 87 TGSGKTIAFALPILQKLSEDPYGIF-ALVLTPTRELAFQIS------------------- 126
Query: 138 IAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGI 197
D FA + + + + VG + + EL RP
Sbjct: 127 --------------------DQFAVLGAGLSIRTAVIVGGMDMMTQALELDNRPH----- 161
Query: 198 CYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAW 256
++VATPGR++DH+ ++ G ++L + +LV+DE DRLL +
Sbjct: 162 ----------------VVVATPGRIVDHLRSSSGEWSLSRIKFLVLDEADRLLTPTFSPE 205
Query: 257 LPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLT 316
L + + + + A T PS + R G K KP+ + + +T
Sbjct: 206 LSYLFDVLPKERQTCLFTA-TLTPSIDKLAEVPPRPG-----KQKPFIHRMNANIETVVT 259
Query: 317 QDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIV 376
+ N L R Y L+C P +L Q + I+
Sbjct: 260 LNQN----------FVLVPSHVRETY-----LYHLLCN---PPELAASLRQLVQPPPTII 301
Query: 377 FTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTR 436
F + + L +LL L I+ Q R +L FR I VLVS+D R
Sbjct: 302 FCTKPRTAAYLTSLLK---TLSIRSTALHSRLTQRERLTSLSLFRSSVIPVLVSTDVGAR 358
Query: 437 GMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
G+D+E V V+N+D P + Y HR GRTARAG+ G + + + + +R K+
Sbjct: 359 GLDIEDVAMVINWDLPNEPEEYTHRVGRTARAGKAGIAISFVTEKDEERVLKI 411
>gi|389612037|dbj|BAM19549.1| Dead box protein 73D, partial [Papilio xuthus]
Length = 248
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P+ L ++C ++ KPL L LL +K + FT+S +S HRL LLN +G+ +
Sbjct: 31 KYTTPDELIENYVVCNAEEKPLILFHLLVEKKWDKVLCFTNSAQSVHRLAVLLNEWGKDQ 90
Query: 399 -IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K+ E S ++ R K L+ F++ ++ V++S+DA+ RG+D+ N VV+YD P IKT
Sbjct: 91 CLKVAELSSALDRASREKVLEKFKQSEVNVIISTDALARGIDIPDCNYVVSYDPPRNIKT 150
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
Y+HR GRT RAG++GR T+L+ +++ FK+ +Q +
Sbjct: 151 YVHRVGRTGRAGRIGRAVTILNHNQLNMFKEQIQSS 186
>gi|321250140|ref|XP_003191703.1| hypothetical protein CGB_A8530W [Cryptococcus gattii WM276]
gi|317458170|gb|ADV19916.1| Hypothetical protein CGB_A8530W [Cryptococcus gattii WM276]
Length = 860
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 200/470 (42%), Gaps = 111/470 (23%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P +++LF + P+ + + L++ + P+Q I P L RD+ ++
Sbjct: 56 PSEITLFSELPMSS------KTQKGLKSSHFLNPTPIQSLA----IPPALQARDILGSAK 105
Query: 78 TGSGKTLSYALPIVQTL---SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIA 134
TGSGKTL++ +P+++ L + L A+V+ PTR+LA+Q
Sbjct: 106 TGSGKTLAFLIPLLERLYLEKWGPMDGLGAVVISPTRELAVQ------------------ 147
Query: 135 DHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 194
+ Q++D I S GL +G + +E
Sbjct: 148 -----------------TFMQLRD----IGKYHNFSAGLVIGGKPLKEE----------- 175
Query: 195 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 254
QE ++IL+ATPGRL+ H+++T GF + LV+DE DRLL +
Sbjct: 176 -----------QERLGRMNILIATPGRLLQHLDSTVGFDPSAVKVLVLDEADRLLDLGFL 224
Query: 255 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 314
L ++ + FS T A GS P ++ SAT
Sbjct: 225 PALKAIV--------SHFSPVQT----APGS-----------------RPSRQTLLFSAT 255
Query: 315 LTQDPNKLAQLDLHHPLFLTTGETRYK--LPERLESYKLIC--ESKLKPLYLVALLQSLG 370
++D LA+L LH PL+++ + + +P LE Y + E KL L+ ++S
Sbjct: 256 QSKDLAALAKLSLHEPLYISCNKPGEEGVMPANLEQYYAVVPLERKLDALW--GFVKSHL 313
Query: 371 EEKCIVFTSSVESTHRLCTLLNHFGELR--IKIKEYSGLQRQSVRSKTLKAFREGKIQVL 428
+ K IVF +S + ++ + F L + + G Q+Q R + F K +L
Sbjct: 314 KMKGIVFVTSGKQVRQVRFIFETFRRLHPGLPLMHLHGKQKQPTRLDIFQRFSSSKSALL 373
Query: 429 VSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+ +D RG+D V+ V+ D P + TYIHR GRTAR G T+L
Sbjct: 374 ICTDVAARGLDFPAVDWVIQLDCPDDVDTYIHRVGRTARYQSAGTALTIL 423
>gi|413934953|gb|AFW69504.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 434
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 146/314 (46%), Gaps = 54/314 (17%)
Query: 205 LQELQSAVDI---LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
+ L SA+ + +V TPGRL+DH+ T+GF+L+ + YLV+DE D+LL ++ L +L
Sbjct: 115 FEALGSAIGLRCSVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDIL 174
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
D TFL SAT+T+ NK
Sbjct: 175 SEMPKDRR-------TFL-------------------------------FSATMTKKVNK 196
Query: 322 LAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 381
L + L +P + ++Y + L+ + K YL+ +L E ++F +
Sbjct: 197 LQRACLRNPAKVEVS-SKYSTVDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTC 255
Query: 382 ESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVE 441
EST L +L + G +K SG Q R L F+ +L+ +D +RG+D++
Sbjct: 256 ESTRLLALMLRNLG---LKAMSISGQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQ 312
Query: 442 GVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF--------KKLLQ-K 492
GV+ V+NYD P K Y+HR GRTARAG+ G +L+++ E + F KK+ Q K
Sbjct: 313 GVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAVSLVNQYEAQWFVLIEQLLGKKIDQCK 372
Query: 493 ADNDSCPIHSIPSS 506
D D I P S
Sbjct: 373 VDRDEVLILKGPIS 386
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQT-LSNR-AVRCLRALVVLPTRDLAL 115
+ E I L +DL + TGSGKT ++ALPI+Q LSNR A + A V+ PTR+LA+
Sbjct: 50 IQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAI 109
Query: 116 QV 117
Q+
Sbjct: 110 QI 111
>gi|336249396|ref|YP_004593106.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
gi|334735452|gb|AEG97827.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
Length = 446
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 198/469 (42%), Gaps = 121/469 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + A+ G P+Q Q+ I L RDL ++ TG+GKT + LP++Q L
Sbjct: 8 LNPDILRAVAEQGYVEPTPIQ----QQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLQRL 63
Query: 95 SN-----RAVRCLRALVVLPTRDLALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSL 148
+ + R +RAL++ PTR+LA QV Y NI L+
Sbjct: 64 TQDQPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLV--------------- 108
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
VF + SI ++ KL G+ D+L
Sbjct: 109 ----------VFGGV---------------SINPQMM------KLRGGV-----DIL--- 129
Query: 209 QSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
VATPGRL+D H NA +L+ + LV+DE DR+L
Sbjct: 130 -------VATPGRLLDLEHQNA---VSLDKVEVLVLDEADRML----------------- 162
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
G + IRR K PR ++ SAT + + LA+
Sbjct: 163 ---------------DMGFIHDIRRVLA------KLPPRRQNLLFSATFSDEIKALAEKL 201
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
LH+PL + R E++ + + K K L L+ ++ +VFT + +
Sbjct: 202 LHNPLEVEVAR-RNTASEQITQHVHFVDKKRKRELLSQLIGEGNWQQVLVFTRTKHGANH 260
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LN G I+ G + Q R++ L F+ G I+VLV++D RG+D+E + +V
Sbjct: 261 LAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGGIRVLVATDIAARGLDIEELPHV 317
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK 492
VNY+ P + Y+HR GRT RA G +L+ DE ++ ++LL+K
Sbjct: 318 VNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIERLLKK 366
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 184/448 (41%), Gaps = 112/448 (25%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G+ PVQ A + L +D+ + TGSGKT ++ALPI+Q L
Sbjct: 16 ACKELGMRHPTPVQRACVPQI----LKGKDVLGMAQTGSGKTAAFALPILQRLGENPYGI 71
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
ALV+ PTR+LA Q++ D F
Sbjct: 72 F-ALVMTPTRELAFQIS---------------------------------------DQFK 91
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ V L + VG + + L +RP +++ATPGR
Sbjct: 92 ALGAGVHLRCAVVVGGMDMTTQAQILTERPH---------------------VVIATPGR 130
Query: 222 LMDHINATRGFT--LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
+ H+ + +LV+DE D LL +Q L T+
Sbjct: 131 IKAHLGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTI------------------- 171
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
F + R+ ++ SAT+T D L L H F E
Sbjct: 172 ---FDGISKQRQT----------------LLFSATMTGDLQALRDLFGHRAFFYQAYEG- 211
Query: 340 YKLPERLESYKLICESKLKPLYLVALLQSL--GE-EKCIVFTSSVESTHRLCTLLNHFGE 396
K E L+ + K+K +YL LL++L G+ I+F S + H L +L+ E
Sbjct: 212 LKTVESLDQRYIFMPGKVKNVYLTYLLENLELGDIRSVIIFVSRCRTCHLLSLILD---E 268
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L I ++ Q R L F+ G+ +L+++D +RG+D+ V+ VVNYD P + K
Sbjct: 269 LGISAVALHSVKTQPQRLAALNQFKSGQATILIATDVASRGLDIPTVDLVVNYDIPRFTK 328
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK 484
Y+HR GRTARAG+ GR +L+ + +V+
Sbjct: 329 DYVHRVGRTARAGRGGRAISLVTELDVE 356
>gi|226229150|ref|YP_002763256.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
gi|226092341|dbj|BAH40786.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
Length = 498
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 147/312 (47%), Gaps = 49/312 (15%)
Query: 195 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 254
G+ P++ +S VD++VATPGRL+DH L+ L YLV+DE DR+L
Sbjct: 108 GGVGMGPQE--HAFRSGVDVIVATPGRLLDHFRQPYA-KLDQLEYLVLDEADRMLD---M 161
Query: 255 AWLPTVLQLTRS-DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+LP + ++ R N R T SA P P A
Sbjct: 162 GFLPEIKKILRHLPNRKR----QTLFFSA-----------------TMPPP-------IA 193
Query: 314 TLTQDP-NKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEE 372
LTQ+ NK L+L G T+ P +LK LVALL+
Sbjct: 194 ALTQEMLNKPVTLNLQRQAAPAKGITQAVYP---------VSQELKSALLVALLKRGDMP 244
Query: 373 KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSD 432
+ +VFT + +RL + L G IK + G + QS R++ L F++G QVLV++D
Sbjct: 245 QALVFTRTKHRANRLASQLVTAG---IKAERIHGNRSQSQRTQALAGFKDGSYQVLVATD 301
Query: 433 AMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
RG+DVE + +VVN+D P + YIHR GRTARA G FT + +E KL+++
Sbjct: 302 IAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGEL-KLIER 360
Query: 493 ADNDSCPIHSIP 504
A + P ++P
Sbjct: 361 AIKRALPRVTVP 372
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L+ L+ +G + P+Q E I P L RD+ + TGSGKT ++ LPI+ L
Sbjct: 10 LHPSLQQGLKELGFARPTPIQ----GEAIPPALEGRDVLACAMTGSGKTYAFLLPILHQL 65
Query: 95 SNRAVRCLRALVVLPTRDLALQV 117
++ RALV+ PTR+LA Q+
Sbjct: 66 MSKPRGNTRALVLTPTRELAAQI 88
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 209/495 (42%), Gaps = 104/495 (21%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A++ G + P+Q+A I GL +RD+ + TGSGKT ++ LP++ +
Sbjct: 296 LSPELLKAVERAGYKTPSPIQMAA----IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 351
Query: 95 S-------NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDS 147
S A+V+ PTR+LA Q+ K+
Sbjct: 352 SRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKF----------------------- 388
Query: 148 LLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQE 207
A +G+ V VG SI E G
Sbjct: 389 ----------------AHYLGIKVVSIVGGQSIE------------EQGF---------R 411
Query: 208 LQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSD 267
++ ++++ATPGRL+D + R L Y+V+DE DR++ ++ + VL
Sbjct: 412 IRQGCEVVIATPGRLIDCLE-RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVL------ 464
Query: 268 NENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDL 327
DA +PS+ ++ + +K R M SAT+ +LA+ L
Sbjct: 465 ------DA---MPSS-----NLKPENEDEELDEKKIYRTTYM-FSATMPPAVERLARKYL 509
Query: 328 HHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRL 387
+P+ +T G T K + + + ++ + K L LL LG++ IVF ++ +ST L
Sbjct: 510 RNPVVVTIG-TAGKATDLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTL 568
Query: 388 CTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVV 447
L+ G ++ G + Q R +L+ FR + VLV++D RG+D+ V +V+
Sbjct: 569 AKGLDKAG---YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 625
Query: 448 NYDKPAYIKTYIHRAGRTARAGQLG--RCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPS 505
NYD P I+ Y HR GRT RAG+ G F LH +V F L Q + P +P
Sbjct: 626 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDV--FYDLKQMLIQSNSP---VPP 680
Query: 506 SLIESLRPVYKSGDV 520
L +K G +
Sbjct: 681 ELARHEASKFKPGSI 695
>gi|444352450|ref|YP_007388594.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
gi|443903280|emb|CCG31054.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
Length = 446
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 198/469 (42%), Gaps = 121/469 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + A+ G P+Q Q+ I L RDL ++ TG+GKT + LP++Q L
Sbjct: 8 LNPDILRAVAEQGYVEPTPIQ----QQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLQRL 63
Query: 95 SN-----RAVRCLRALVVLPTRDLALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSL 148
+ + R +RAL++ PTR+LA QV Y NI L+
Sbjct: 64 TQEQPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLV--------------- 108
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
VF + SI ++ KL G+ D+L
Sbjct: 109 ----------VFGGV---------------SINPQMM------KLRGGV-----DIL--- 129
Query: 209 QSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
VATPGRL+D H NA +L+ + LV+DE DR+L
Sbjct: 130 -------VATPGRLLDLEHQNA---VSLDKVEVLVLDEADRML----------------- 162
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
G + IRR K PR ++ SAT + + LA+
Sbjct: 163 ---------------DMGFIHDIRRVLA------KLPPRRQNLLFSATFSDEIKALAEKL 201
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
LH+PL + R E++ + + K K L L+ ++ +VFT + +
Sbjct: 202 LHNPLEVEVAR-RNTASEQITQHVHFVDKKRKRELLSQLIGEGNWQQVLVFTRTKHGANH 260
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LN G I+ G + Q R++ L F+ G I+VLV++D RG+D+E + +V
Sbjct: 261 LAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGGIRVLVATDIAARGLDIEELPHV 317
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK 492
VNY+ P + Y+HR GRT RA G +L+ DE ++ ++LL+K
Sbjct: 318 VNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIERLLKK 366
>gi|440803376|gb|ELR24282.1| DEAD (AspGlu-Ala-Asp) box polypeptide 47 isoform 3, putative,
partial [Acanthamoeba castellanii str. Neff]
Length = 261
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 136/278 (48%), Gaps = 42/278 (15%)
Query: 214 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 273
I+ ATPGRL+ H+ T+GF+L+ L YLV+DE DRLL Y+ + +L
Sbjct: 8 IICATPGRLLFHLQNTKGFSLKSLKYLVLDEADRLLNMDYEEEIDQILAC---------- 57
Query: 274 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFL 333
LP ER + SAT+T KL + L +P+ +
Sbjct: 58 -----LPK-------------ERH----------TYLFSATMTSKVKKLERASLANPVKI 89
Query: 334 TTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNH 393
+ + L++Y + E K K YLV LL IVF ++ + R+ +L +
Sbjct: 90 SVSSKYSTVDTLLQNYVFVPE-KFKDCYLVYLLNEFVGNSIIVFVATCNTAQRVALMLRN 148
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G + I G QS R +L F+ G +L+++D +RG+D+ V+ ++NYD P
Sbjct: 149 LGFEALPIH---GKMSQSRRIGSLNTFKTGDRNILLATDVASRGLDIPSVDLIINYDIPL 205
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
K YIHR GRTARA + GR +++ + +++ F+K+ Q
Sbjct: 206 NPKDYIHRVGRTARAQRAGRAVSVVTQYDIEFFQKIEQ 243
>gi|161504014|ref|YP_001571126.1| ATP-dependent RNA helicase RhlE [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160865361|gb|ABX21984.1| hypothetical protein SARI_02107 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 455
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 197/469 (42%), Gaps = 121/469 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L+P + A+ G P+Q Q+ I L RDL ++ TG+GKT + LP++Q L
Sbjct: 8 LNPDILRAIAEQGYREPTPIQ----QQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63
Query: 95 -----SNRAVRCLRALVVLPTRDLALQVNSARCKYCCK-NIFGLIADHSIAEMCVQFDSL 148
+ R +RAL++ PTR+LA Q+ Y NI L+
Sbjct: 64 ITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLV--------------- 108
Query: 149 LFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 208
VF + SI ++ KL G+ DVL
Sbjct: 109 ----------VFGGV---------------SINPQMM------KLRGGV-----DVL--- 129
Query: 209 QSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS 266
VATPGRL+D H NA + L+ + LV+DE DR+L
Sbjct: 130 -------VATPGRLLDLEHQNAVK---LDQIEILVLDEADRML----------------- 162
Query: 267 DNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLD 326
G + IRR K P+ ++ SAT + D LA+
Sbjct: 163 ---------------DMGFIHDIRRVLA------KLPPKRQNLLFSATFSDDIKALAEKL 201
Query: 327 LHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHR 386
LH+PL + R E++ + + K K L L+ ++ +VFT + +
Sbjct: 202 LHNPLEIEVAR-RNTASEQVTQHVHFVDKKRKRELLSLLIGQGNWQQVLVFTRTKHGANH 260
Query: 387 LCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNV 446
L LN G I+ G + Q R++ L F+ G ++VLV++D RG+D+E + +V
Sbjct: 261 LAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGDLRVLVATDIAARGLDIEELPHV 317
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE---VKRFKKLLQK 492
VNY+ P + Y+HR GRT RA G +L+ DE ++ +KLL+K
Sbjct: 318 VNYELPNVPEDYVHRIGRTGRAAATGEALSLVCIDEHKLLRDIEKLLKK 366
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,716,731,870
Number of Sequences: 23463169
Number of extensions: 311375109
Number of successful extensions: 879643
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 28557
Number of HSP's successfully gapped in prelim test: 4200
Number of HSP's that attempted gapping in prelim test: 761420
Number of HSP's gapped (non-prelim): 88834
length of query: 520
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 373
effective length of database: 8,910,109,524
effective search space: 3323470852452
effective search space used: 3323470852452
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)