BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010028
(520 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7FGZ2|RH1_ARATH DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana
GN=RH1 PE=2 SV=3
Length = 522
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/514 (68%), Positives = 410/514 (79%), Gaps = 39/514 (7%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E K + V+PWMR+PVDVS E+C LD LPCL+P+LK AL+NMGISSLFPVQVAVW E
Sbjct: 5 KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
TIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLAL
Sbjct: 65 TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLAL------ 118
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
QVKDVF AIAPAVGLSVG AVGQSSIA
Sbjct: 119 ---------------------------------QVKDVFDAIAPAVGLSVGSAVGQSSIA 145
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 241
EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDHIN T+GFTLEHL YLV
Sbjct: 146 GEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLV 205
Query: 242 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 301
VDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+PSAFGSL+T+RR VERGFK K
Sbjct: 206 VDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGK 265
Query: 302 PYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLY 361
PYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+LE +LICE+ +KP+Y
Sbjct: 266 PYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVY 325
Query: 362 LVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFR 421
LVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYSG QS+RSK LKAFR
Sbjct: 326 LVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFR 385
Query: 422 EGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKD 481
+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IHRAGRTARAGQ GRCFTLL
Sbjct: 386 KGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNH 445
Query: 482 EVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 515
EV+RF KLL+K +DSCPI+ IP + ++S+R Y
Sbjct: 446 EVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATY 479
>sp|Q0DWT8|RH1_ORYSJ DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp.
japonica GN=Os02g0795900 PE=2 SV=1
Length = 521
Score = 620 bits (1599), Expect = e-177, Method: Compositional matrix adjust.
Identities = 311/511 (60%), Positives = 370/511 (72%), Gaps = 42/511 (8%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 18 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 77
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKN 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLAL
Sbjct: 78 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLAL------------- 124
Query: 129 IFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 188
QVK+VF AIAP VGLSVG AVGQSSIADE+S LI
Sbjct: 125 --------------------------QVKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLI 158
Query: 189 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRL 248
++ K D E + E Q+ VDILVATPGRLMDHI+ T+GF+LEHL YLVVDETDR+
Sbjct: 159 EKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRM 218
Query: 249 LREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 307
LREAYQ+WLPTV+QLTRS ++N +SD + + L TIRR GVERGFK K +PRL
Sbjct: 219 LREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLHPLTTIRRSGVERGFKGKSFPRLA 276
Query: 308 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQ 367
K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+SYKL+C+S LKPL L+ LLQ
Sbjct: 277 KIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSNLKPLSLIVLLQ 336
Query: 368 SLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQV 427
L EKC+VFTSSVES+HRL TLL F +L K EYS LQR+S R KTL AF+EGKI V
Sbjct: 337 ELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRLQRESTRRKTLDAFKEGKIDV 396
Query: 428 LVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFK 487
L+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTARAG+ G CFT L K EVK F
Sbjct: 397 LIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHEVKAFD 456
Query: 488 KLLQKADNDSCPIHSIPSSLIESLRPVYKSG 518
K+L+KADN SC +HS+P +E+LRPV+ S
Sbjct: 457 KMLKKADNSSCSLHSLPEESVETLRPVFSSA 487
>sp|Q8N8A6|DDX51_HUMAN ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3
Length = 666
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 276/538 (51%), Gaps = 91/538 (16%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D A L V
Sbjct: 293 LAQQVS---------KVFNIYTD------------------------------ATPLRVS 313
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 314 LVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGF 360
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ F P A L+ +
Sbjct: 361 SLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LQRRQAQ 411
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ET 338
V P L K++ SATLTQ+P KL QL LH P +TG
Sbjct: 412 AVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSG 471
Query: 339 RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR 398
+Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG
Sbjct: 472 KYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG-- 529
Query: 399 IKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTY 458
+ + E+S R LK F +GKIQ+L+S+DA RG+DV+GV VVNYD P Y++TY
Sbjct: 530 VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTY 589
Query: 459 IHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+
Sbjct: 590 VHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYE 647
>sp|Q6DRI7|DDX51_DANRE ATP-dependent RNA helicase DDX51 OS=Danio rerio GN=ddx51 PE=2 SV=1
Length = 652
Score = 281 bits (719), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 267/532 (50%), Gaps = 92/532 (17%)
Query: 11 VLP-WMRSPVDVSLFEDC-----PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---E 61
VLP W+ P DV + +D P+ +P + P L LQ GI S FPVQ V E
Sbjct: 168 VLPQWLSQP-DV-IQKDIKSNLIPISEVPGICPTLLRKLQTNGIQSFFPVQAEVIPAILE 225
Query: 62 TIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
++G GL RD+C+++PTGSGKTL++ +P+VQ LS R VR +RAL VLPT++LA
Sbjct: 226 SVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVRALAVLPTKELA 285
Query: 115 LQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLA 174
QV+ +VF+A L V +
Sbjct: 286 QQVS---------------------------------------NVFSAYTEGSSLKVVMI 306
Query: 175 VGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTL 234
GQ S A E + L ++ G+ + S DI+VATPGRL+DHIN F+L
Sbjct: 307 TGQKSFAAEQTAL---SEIRGGVSH----------SMADIVVATPGRLVDHINKNSSFSL 353
Query: 235 EHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGV 294
+HL +L++DE DR++ +Q+WL V + S + S F + G +
Sbjct: 354 QHLRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGE--THTSVFRRTVPGPITAASLS-- 409
Query: 295 ERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT---------GETRYKLPE 344
P L K++ SATLTQ+P KL LDLH P LF +T + + P+
Sbjct: 410 ------PPQIPLQKLLFSATLTQNPEKLQLLDLHQPRLFSSTHSLTDNPAQSQDTFHFPQ 463
Query: 345 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEY 404
L Y + C KPL ++ L L + FT+S E HRL L+ FG +++ E+
Sbjct: 464 GLSEYYVPCTFSKKPLIILHFLLRLKFSPALCFTNSREGAHRLYLLVKLFGG--VEVAEF 521
Query: 405 SGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
S R KTLK F +GKI +L+S+DA RG+D+ GV V+NYD P YI+TYIHR GR
Sbjct: 522 SSKLSPGERQKTLKDFEKGKIPLLISTDAAARGIDINGVKCVINYDAPQYIRTYIHRVGR 581
Query: 465 TARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYK 516
TARAG+ G FT L K + KRF K++ A + + ++S+ Y+
Sbjct: 582 TARAGKAGLAFTFLLKVQEKRFLKMVSDAGSPGIQKQHVHPEALKSMESRYE 633
>sp|Q6P9R1|DDX51_MOUSE ATP-dependent RNA helicase DDX51 OS=Mus musculus GN=Ddx51 PE=2 SV=1
Length = 639
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 276/544 (50%), Gaps = 98/544 (18%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA QV+ +F + D L V
Sbjct: 265 LAQQVS---------KVFNIYTD------------------------------TTPLRVA 285
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF
Sbjct: 286 LVTGQKSLAKEQESLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGF 332
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L+ L +L++DE DR++ +Q+WLP V+ A+ + GS ++R
Sbjct: 333 SLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AAFYSEGPTGSCALLQRT 380
Query: 293 ---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT-------------- 335
+ P L K++ SATLTQDP KL +L L+ P +T
Sbjct: 381 QPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDTAEVD 440
Query: 336 -GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y P L + + C KPL ++ L+ + + + FT+S E++HRL L F
Sbjct: 441 ENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAF 500
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + E+S R K LK F +GKIQ+L+S+DA RG+DV+GV V+NYD P Y
Sbjct: 501 GG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQY 558
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPV 514
++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A H IP L++ L
Sbjct: 559 LRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELTHHEIPRKLLQPLVAR 618
Query: 515 YKSG 518
Y++
Sbjct: 619 YETA 622
>sp|Q54BD6|DDX51_DICDI Probable ATP-dependent RNA helicase ddx51 OS=Dictyostelium
discoideum GN=ddx51 PE=3 SV=1
Length = 563
Score = 235 bits (599), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 260/506 (51%), Gaps = 88/506 (17%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L+ I +LFPVQ V T G D+C+ +PTGSGKTL+YA+P+VQ + R V
Sbjct: 30 LKEQSIINLFPVQQEIVPFINRTEG-----HDICVCAPTGSGKTLAYAIPLVQKIVKRVV 84
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
R +R V++PT DL +QV +
Sbjct: 85 RRVRVAVIVPTHDLVIQV---------------------------------------EKT 105
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
F +I L V L++G E LIK Y +S VDI+V+TP
Sbjct: 106 FQSIIKGTDLVV-LSLGVKPFHIEQKLLIKNHSYGEHALY---------ESLVDIIVSTP 155
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE-NRFSDASTF 278
GR++DHIN T GFTL++L YLV+DE DRLLR+++Q WL V+ T ++ N+ +
Sbjct: 156 GRIVDHINETLGFTLKYLNYLVIDEADRLLRQSFQDWLEIVIDSTNQHSDLNQQQEEQLI 215
Query: 279 LPSAFGSLKTIRRCGVERGFKDKPYP---------RLVKMVLSATLTQDPNKLAQLDLHH 329
++ G ++ + KD +LVK++LSAT+T +P+K++ L L+
Sbjct: 216 KYNSKGDIELFEKS---ISLKDNNNQMNHLCWSEFKLVKLLLSATMTYNPSKISLLQLNA 272
Query: 330 PLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALL-QSL--------GEEKCIVF 377
PLF TT +T+ Y +P L+ +I KPL L+ ++ +SL ++K I F
Sbjct: 273 PLFFTTSKTKEIKYSMPSTLKECYIISNGDQKPLVLLNIIYESLLKNNANGENKKKIICF 332
Query: 378 TSSVESTHRLCTLLNHFGE---LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAM 434
T SV+ THRL TLL G+ L+ +EYS R+ L F+ +I +L+ SD M
Sbjct: 333 TKSVDITHRLNTLLKLIGQVDKLKFTCEEYSSSLSTVERADLLSRFKLNQIDILICSDIM 392
Query: 435 TRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKAD 494
+RGMD++ ++ V+NY+ P I Y+HR GRTARAG G +T++ K E+K + +++KA+
Sbjct: 393 SRGMDIQDIDVVINYNTPPNITLYVHRVGRTARAGNFGVSYTIVDKSEIKYYISMMKKAE 452
Query: 495 NDSCPIHSI--PSSLIESLRPVYKSG 518
S +H + ++ E + YK G
Sbjct: 453 R-SQTLHCLKWKPNVYEKFQSSYKLG 477
>sp|P26802|DDX51_DROME Probable ATP-dependent RNA helicase Dbp73D OS=Drosophila
melanogaster GN=Dbp73D PE=2 SV=3
Length = 687
Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 253/532 (47%), Gaps = 107/532 (20%)
Query: 5 KKKSMPVLP-WMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPV 54
KKK LP W+ P + E+ P +D L L+ AL+ M I LFPV
Sbjct: 104 KKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPV 163
Query: 55 QVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
Q V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 164 QKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLP 223
Query: 110 TRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGL 169
+LALQV I+E+C + + L
Sbjct: 224 VAELALQVYRV-----------------ISELCSKTE----------------------L 244
Query: 170 SVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINAT 229
V L Q + DE +L+++ K G Y S DI+V TPGRL+DH++AT
Sbjct: 245 EVCLLSKQHKLEDEQEKLVEQYK---GKYY----------SKADIVVTTPGRLVDHLHAT 291
Query: 230 RGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTI 289
+GF L+ L +LV+DE DR++ +Q WL + + + A T P + L+
Sbjct: 292 KGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAELQA- 348
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET----------- 338
F +P+ K++ SATL+QDP KL L L P T T
Sbjct: 349 -------SFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEG 397
Query: 339 --------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST 384
RY P L + E +LKPL + AL++ ++ + FT+S +
Sbjct: 398 ADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQA 457
Query: 385 HRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 443
RL +L F + K+ E SG VR++ L+ F GKI L+ SDA+ RG+DV V
Sbjct: 458 TRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADV 517
Query: 444 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
+ V++Y+ P +I TYIHR GRTARAG+ G T+L + ++ FKK+L A+
Sbjct: 518 DVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDANK 569
>sp|Q76PD3|DBP6_SCHPO ATP-dependent RNA helicase dbp6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp6 PE=2 SV=1
Length = 604
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 236/521 (45%), Gaps = 103/521 (19%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG 64
K VLP W+ P+ V L + +L LQ I+ F VQ AV +
Sbjct: 104 KNITSVLPKWLAEPITVDPNTTVEFSSL-NISSKLVERLQKQNITRGFAVQAAVLPLLLQ 162
Query: 65 PGL------FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVN 118
G + D+C+++ TGSGKTLSY +PIVQ LS+R V LR +V++PTR+L +QV
Sbjct: 163 DGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQV- 221
Query: 119 SARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQS 178
F GL V GQ
Sbjct: 222 --------------------------------------AKTFEYYMSGAGLQVCAWTGQK 243
Query: 179 SIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLC 238
S+ E +L E + +D+LV+TPGRL+DHI F+L+HL
Sbjct: 244 SLRHETYQLNG----------------DENECRIDVLVSTPGRLVDHIRNDESFSLQHLR 287
Query: 239 YLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRFSD-----ASTFLPSAFGSLKTI 289
Y+V+DE DRLL +++Q W+ TV+ N++ D + TFLP +L
Sbjct: 288 YMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNILDLDQNISPTFLPD-IDTLLPY 346
Query: 290 RRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------GETR 339
R P P L K+V SATLT+DP+K+A L LH+P + GE
Sbjct: 347 RL----------PSP-LQKLVFSATLTRDPSKIASLKLHNPRLVLVQNKDMEVDDGGEIE 395
Query: 340 -----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVEST---HRLCTLL 391
+ +P L+ Y + S+ KP+ L L+ S + F S E+ HRL L+
Sbjct: 396 DDAIVFSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTNILCFVKSNEAAARLHRLLELI 454
Query: 392 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 451
+ ++ + R K + F G + +LV SD M RG+DV NV+NYD
Sbjct: 455 HESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDP 514
Query: 452 PAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQK 492
P +++Y+HR GRTARAG+ G +TL+ E F KL+++
Sbjct: 515 PLSVRSYVHRIGRTARAGREGFAWTLVQSHEGHHFSKLVKQ 555
>sp|A2QA23|DBP6_ASPNC ATP-dependent RNA helicase dbp6 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp6 PE=3 SV=1
Length = 593
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 245/510 (48%), Gaps = 92/510 (18%)
Query: 8 SMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPG 66
S+P PW+ +P+ S E L +D L L++ G F VQ V + GP
Sbjct: 104 SLP--PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPT 160
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCC 126
DLCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q A C+ C
Sbjct: 161 NHPGDLCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREA-CELC- 218
Query: 127 KNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISE 186
A GL V AVG +I DE E
Sbjct: 219 -------------------------------------AAGSGLRVASAVGNVAIKDEQRE 241
Query: 187 LIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETD 246
+ G + E VDIL+ TPGRL+DH+ T+GFTL++L +LV+DE D
Sbjct: 242 SL------PGYVHRSE-------PNVDILICTPGRLVDHLRYTKGFTLKNLEWLVIDEAD 288
Query: 247 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKPYPR 305
RLL E++Q W+ V+ S + P AFG S + G+ K+ PR
Sbjct: 289 RLLNESFQEWVDVVMT----------SLDARKAPDAFGFSGNFLSGLGLPIQSKE---PR 335
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTG----------------ETRYKLPERLESY 349
K+VLSAT+T+D KL L L +P + G + ++ LP LE +
Sbjct: 336 --KVVLSATMTRDVTKLNSLRLANPKLVVIGSDAAATEDESGGVAPSDEQFTLPPTLEEH 393
Query: 350 KL-ICESKLKPLYLVALLQS--LGEEKCIVFTSSVESTHRLCTLLNHFG-ELRIKIKEYS 405
+ + + KPLYL+ LL S E K +VFT S ES RL LL L +I
Sbjct: 394 TVSVGDGSQKPLYLLRLLLSHIKLETKILVFTKSSESASRLARLLALLEPSLSDRIGTII 453
Query: 406 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
+ S KTL A+R GKI V++++D +RG+D+ + +VVNYD PA I TY+HR GRT
Sbjct: 454 KSNKSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITTYVHRVGRT 513
Query: 466 ARAGQLGRCFTLLHKDEVKRFKKLLQKADN 495
ARAGQ G +TL+ E K F + K +
Sbjct: 514 ARAGQKGSAWTLVAHREGKWFASQIAKGSD 543
>sp|A5E726|DBP6_LODEL ATP-dependent RNA helicase DBP6 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP6 PE=3 SV=1
Length = 663
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 241/505 (47%), Gaps = 117/505 (23%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE--------TI 63
L W+ +P +++ + P P L P + L+++G + F VQV V + +
Sbjct: 207 LDWLTTPEYIAIADTKPFSEFP-LSPFMHENLESLGFENAFAVQVGVLSKLLPEIQANKL 265
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P F D+ +N+ TGSGKTL+Y++PI+++L +R V +RA+V++PT+ L +N R
Sbjct: 266 RPDAFG-DVLVNASTGSGKTLAYSIPIIESLKDRVVPRVRAIVLVPTKPL---INQVR-- 319
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
A + L++G + S+ ++
Sbjct: 320 ----------------------------------------ATMLQLALGTNLNIVSLKND 339
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
IS R + E I P D++++TPGRL++H+ A +L L YLVVD
Sbjct: 340 IS---IREESERLIELVP-----------DVVISTPGRLVEHL-AMDSISLSSLRYLVVD 384
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DRLL +++Q W ++ ++ + + SLK
Sbjct: 385 EADRLLNQSFQNWSQILI--------SKIHLQQVYDVANVWSLK---------------- 420
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICE 354
+ K + SATLT D KLA LD H+P L +++ + +P L YKL + +
Sbjct: 421 --VQKFIFSATLTTDAGKLASLDFHNPRLLIVNDSQRLVNELFSVPAMLSEYKLNFGVAK 478
Query: 355 SKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCTLLNH-FGELRIKIKEYSGL--- 407
S LKPL L L + +EK +VFT S ES+ RLCTLL F + ++ K G
Sbjct: 479 SSLKPLILAKFL--IAQEKLSDVLVFTKSNESSIRLCTLLQAIFDRICLQEKVKVGFMNL 536
Query: 408 --QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
R S+RSK LK F KI +LV++D + RG+DV + +VVNYD + Y+HR GRT
Sbjct: 537 TNNRTSLRSKILKDFTSQKINILVATDLIARGLDVTSIKDVVNYDLLNSSREYVHRVGRT 596
Query: 466 ARAGQLGRCFTLLH-KDEVKRFKKL 489
ARA Q G + L+ K E K FK +
Sbjct: 597 ARANQAGNAYNLVFGKGEEKWFKTI 621
>sp|A3LSJ2|DBP6_PICST ATP-dependent RNA helicase DBP6 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP6 PE=3 SV=2
Length = 591
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 229/502 (45%), Gaps = 113/502 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW--------QETI 63
L W+ +P+ S + P + P L L+ ++ F VQ+A+ + +
Sbjct: 138 LDWLATPIYASPEDSKPFSEFE-ISPFLLKNLERDNFTTAFSVQIAIMDILLHDIKRNRL 196
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + + D+ +N+ TGSGKTL+Y++PI++ L NR V +RA+V++PT+ L
Sbjct: 197 EPDV-KGDILVNAATGSGKTLAYSIPIIEALHNRVVPRVRAIVLVPTKPL---------- 245
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QVK F ++ LSV SI +E
Sbjct: 246 -----------------------------INQVKATFVQLSRGTNLSVVSLRNDVSIKEE 276
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVD 243
+++ P DI+V+TPGRL++HI + + L L +LV+D
Sbjct: 277 GIKIVNSPP--------------------DIIVSTPGRLVEHI-SNKSINLNSLQFLVID 315
Query: 244 ETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPY 303
E DRLL +++Q W ++ D + +K P
Sbjct: 316 EADRLLNQSFQNWCQVLISSLEGD------------------------VNIAEEWKITPQ 351
Query: 304 PRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICE 354
K++ SATLT D KL+ L P + + + + +P L Y + +
Sbjct: 352 ----KLIFSATLTTDSGKLSALKFQKPRLVIVNDRKQLVNEIFNVPSSLSEYTIQFGTAK 407
Query: 355 SKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELR--IKIKEYSGLQRQ 410
+ +KPL L LL++ ++FT S E++ RLC LL FG+L + I + +
Sbjct: 408 ASIKPLILAKYLLENNKLSNVLIFTKSNEASIRLCKLLELMFGKLHPSMNIAYINSTNNK 467
Query: 411 S-VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAG 469
S +R+K LK F KI +LV++D + RG+D+ + +V+NYD P + Y+HR GRTARA
Sbjct: 468 SAIRTKILKDFSTQKINILVATDLIARGIDILSITDVINYDLPNSSREYVHRVGRTARAN 527
Query: 470 QLGRCFTL-LHKDEVKRFKKLL 490
Q G +TL K E K FKK++
Sbjct: 528 QTGHAYTLCFGKGEAKWFKKII 549
>sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP6 PE=3 SV=2
Length = 631
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 235/508 (46%), Gaps = 120/508 (23%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S E P +K LQ+ G SS F VQV+V + + I
Sbjct: 176 LDWLATPIYASTTETVPFSSFGLSSSMVK-NLQSNGFSSAFSVQVSVLKLLLPDMESQAI 234
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCK 123
P + DL +N+ TGSGKTL YA+PI+++L NR V +RA+V++PT+ L
Sbjct: 235 RPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRIVPRVRAIVLVPTKPL---------- 283
Query: 124 YCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADE 183
+ QVK FA ++ LSV SI DE
Sbjct: 284 -----------------------------ISQVKATFAMLSKNTNLSVVSLRSDISINDE 314
Query: 184 ISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVV 242
Q LQ DI+V+TPGRL++H+ T G L+ L YLV+
Sbjct: 315 A---------------------QRLQVVPDIIVSTPGRLVEHL--TNGHINLKSLRYLVI 351
Query: 243 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 302
DE DRLL +++Q W T+ ++R D+ N S+ +T R
Sbjct: 352 DEADRLLNQSFQNWCETL--MSRIDS-NPISELD----------QTWR------------ 386
Query: 303 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---IC 353
P + K+V SATLT D +L+ L L P + + + +P L+ YKL
Sbjct: 387 -PSVQKLVFSATLTTDAGRLSMLKLQRPRLIIVNDRHELVNELFTVPATLQEYKLSLGSA 445
Query: 354 ESKLKPLYLVALLQSLGEEKCI---VFTSSVESTHRLCTLLNH----FGELRIKIKEYSG 406
S KPL L L S E+K + VF S E++ RLC LL FG L + + +
Sbjct: 446 RSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEASLRLCRLLQLLFRVFG-LDVTVSYLNS 502
Query: 407 LQR-QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 465
S R+K LK F + +LV +D + RG+D+ + NV+NYD P + Y+HR GRT
Sbjct: 503 TNNAASTRAKILKDFANQTVHILVVTDLIARGIDIATITNVINYDLPNSSRDYVHRVGRT 562
Query: 466 ARAGQLGRCFTL-LHKDEVKRFKKLLQK 492
ARA Q G +T+ K E K F +L+++
Sbjct: 563 ARANQDGEAYTMCFGKGETKWFTQLVRE 590
>sp|Q6BPT8|DBP6_DEBHA ATP-dependent RNA helicase DBP6 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP6 PE=3 SV=2
Length = 576
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 153/507 (30%), Positives = 233/507 (45%), Gaps = 114/507 (22%)
Query: 12 LPWMRSPVDVSLFEDCPLDHL--PCLDPRLKVALQNMGISSLFPVQVAVW--------QE 61
L W+ +P+ + E P P L + L+NMG S F VQ++V +
Sbjct: 112 LDWLTTPIYTAPEETKPFAEFQNPPLSSLMIKNLRNMGFESAFSVQISVLNLMLKDIERN 171
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSAR 121
+ P + DL +N+ TGSGKTL+Y++PI+++L V +RA++++PT+ L
Sbjct: 172 RLQPDM-RGDLLVNASTGSGKTLAYSIPIIESLQTVKVPRVRAIILVPTKPL-------- 222
Query: 122 CKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIA 181
+ QVK ++ LS+ S+
Sbjct: 223 -------------------------------INQVKTTLNQLSKGTNLSI------VSLK 245
Query: 182 DEISELIKRPKLEAGICYDPEDVLQELQSAV-DILVATPGRLMDHINATRGF-TLEHLCY 239
+++S IK E GI +LQ+ DI+V+TPGRL+DH+ T G+ +L++L Y
Sbjct: 246 NDLS--IK----EEGI---------KLQTNEPDIIVSTPGRLVDHL--TNGYISLKNLQY 288
Query: 240 LVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFK 299
LV+DE DRLL +++Q W L S I+ + +K
Sbjct: 289 LVIDEADRLLNQSFQNW-------------------CQILISKIDEFTNIKERNISNSWK 329
Query: 300 DKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL-- 351
+ KM+ SATLT D KL+ L H P + + LP L +KL
Sbjct: 330 ----LNVQKMIFSATLTTDAGKLSLLKFHKPRLIIVNNKEQLVNEMFSLPATLNEFKLQF 385
Query: 352 -ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCT----LLNHFGELRIKIKEYS 405
+S LKPL L L S + ++FT S +++ RL ++N G I I +
Sbjct: 386 GSAKSSLKPLILSKFLLSKNKLANVLIFTKSNDASLRLSRLLSLIMNKLGSETINIAYIN 445
Query: 406 GLQRQ-SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 464
SVRSK LK F + I +LV++D + RG+D+ + +V+NYD P + Y+HR GR
Sbjct: 446 STNNTTSVRSKILKDFSKQTINILVATDLIARGIDILSITDVINYDLPNSSREYVHRVGR 505
Query: 465 TARAGQLGRCFTL-LHKDEVKRFKKLL 490
TARA Q G + K E K FKKL+
Sbjct: 506 TARANQEGFAYNFCFGKGEAKWFKKLM 532
>sp|A7TFZ9|DBP6_VANPO ATP-dependent RNA helicase DBP6 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP6 PE=3 SV=1
Length = 637
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 219/473 (46%), Gaps = 124/473 (26%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSG 81
+DP+L +Q + FP+Q ++ ET+ P L F R D+ +N+ TGSG
Sbjct: 182 IDPKLLKNIQQNFSTDTFPIQ-SILLETLLPTLNFSYNITKKNFTRRVGDVLVNASTGSG 240
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEM 141
KTL+Y++PI+Q LS R V LRALV++PT+ L
Sbjct: 241 KTLAYSIPILQILSKRTVNKLRALVIVPTKLL---------------------------- 272
Query: 142 CVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP 201
+ QV + F +A L V ++ ++S+ +E +L
Sbjct: 273 -----------INQVYETFNNLAQGTSLIVSISKLENSLKEENKKL-------------- 307
Query: 202 EDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVL 261
LQ+ DIL+ TPGRL+DH+ + L +L +LV+DE DRLL +++Q W +L
Sbjct: 308 ------LQNEPDILITTPGRLVDHLQSG-AVNLRNLKFLVLDEADRLLNQSFQNWCNELL 360
Query: 262 QLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNK 321
++D ++ +P +VKMV SATLT + K
Sbjct: 361 NKLKTDKQDH-------MPG-----------------------NIVKMVFSATLTTNTEK 390
Query: 322 LAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVF 377
L L ++P LF+ Y LP L+ Y L ++ KPL+L+ LL + K +VF
Sbjct: 391 LHGLQFYNPKLFVMDSVKLYHLPRMLQEYNLHIPTAKTSYKPLFLLRLLSEINGSKMLVF 450
Query: 378 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKA------------FREGKI 425
S ES+ RL +LL + I+ K S SV S KA K+
Sbjct: 451 VKSNESSLRLASLL----SIMIEHKLGSQFDINSVNSNNTKAENRRIVNEFASNNNTSKV 506
Query: 426 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
QVL+++D M+RG+D+ + +V+NYD P + YIHR GRTARA G + +L
Sbjct: 507 QVLITTDVMSRGVDINDITDVLNYDVPISSQQYIHRCGRTARAQSKGTAYNML 559
>sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP6 PE=3 SV=1
Length = 606
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 221/499 (44%), Gaps = 116/499 (23%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
P SP D F D L + L+ MG + F VQ++V + ++
Sbjct: 160 PQYASPSDKKAFTDFKLSSFMIKN------LEKMGFTEAFSVQISVLNMMLPEIEAQKLK 213
Query: 71 -----DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYC 125
D+ +N+ TGSGKTL+Y++PI+++L R V +R ++++PT+ L
Sbjct: 214 PDRVGDILVNASTGSGKTLAYSIPIIESLYRRVVPRVRVIILVPTKPL------------ 261
Query: 126 CKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEIS 185
+ QVK ++ L + SI DE
Sbjct: 262 ---------------------------INQVKSTLLQLSSGTNLQIAALKNDVSINDEKD 294
Query: 186 ELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDET 245
L K S DI+V+TPGRL++H+ L L YL++DE
Sbjct: 295 SLTK--------------------SVPDIIVSTPGRLVEHL-LNDSINLSSLQYLIIDEA 333
Query: 246 DRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPR 305
DRLL +++Q W +L S ++ + + V+
Sbjct: 334 DRLLNQSFQNWSNVLLDKIDSQ----------------INIAEVWKLSVQ---------- 367
Query: 306 LVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESK 356
K+V SATLT D KL+ L ++P + +++ + +P L +K+ + ++
Sbjct: 368 --KLVFSATLTTDAGKLSSLKFYNPRLIIVNDSKQLVNEIFTVPVTLSEFKIHLGVAKNS 425
Query: 357 LKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLL-NHFGELRIKIKE---YSGLQRQS 411
LKPL L L S + ++FT S ES+ RL LL + F +L I +K S R S
Sbjct: 426 LKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLISLFQKLSINLKIAFINSTNNRTS 485
Query: 412 VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQL 471
+RSK LK F ++ +L+++D + RG+DV + +V+NYD P + Y+HR GRTARA Q+
Sbjct: 486 IRSKILKQFSNQEVNILITTDLIARGIDVASITDVINYDLPNSSREYVHRVGRTARANQV 545
Query: 472 GRCFTL-LHKDEVKRFKKL 489
G ++ K E F KL
Sbjct: 546 GYAYSFCFGKGENSWFNKL 564
>sp|Q6FST5|DBP6_CANGA ATP-dependent RNA helicase DBP6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP6 PE=3 SV=1
Length = 651
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 220/469 (46%), Gaps = 115/469 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
L P+L ++ S FP+Q A+ + + F R D+ +N+ TGSGK
Sbjct: 200 LTPKLLNNIEKYFSKSTFPIQTAMLDQYLKLINFTLKTSKKNFTRRIGDILVNASTGSGK 259
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++PI+QTLS+R V LR L++LPT+ L
Sbjct: 260 TLAYSIPIIQTLSSRTVNKLRVLIILPTKLL----------------------------- 290
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
+ QV + +A L + ++ ++S +E L+K
Sbjct: 291 ----------INQVFQTMSQLAEGTSLVITVSKLENSFNEEHKRLLK------------- 327
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
+ DI + TPGRL+DH+ +L +L +LV+DE DRLL +++Q W+P V+
Sbjct: 328 -------TEPDIFITTPGRLVDHL-TNSSISLRNLKFLVLDEADRLLNQSFQNWIPEVMS 379
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
+SD ++ +P + ++KMV SATLT + KL
Sbjct: 380 KFKSDKFDQ-------MPGS-----------------------IIKMVFSATLTTNTEKL 409
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFT 378
L L++P LF T Y LP L+ Y+L +S KPLYL+ LL+ L K +VF
Sbjct: 410 NDLQLYNPTLFATDSVKLYNLPPTLQEYQLQIPSAKSVYKPLYLLKLLEQLSGGKTLVFV 469
Query: 379 SSVESTHRLCTLLN-----HFGELRIKIKEYSGLQRQSVRSKTLKAFRE----GKIQVLV 429
S ES+ +L LL H L+I + + ++ + + F + + VL+
Sbjct: 470 RSNESSLKLEVLLKSLIKGHMTTLQIVVHSINSNNSKAENRRLVTDFTKESLPNQTNVLI 529
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
++D M+RG+D+E + NV+NYD P + Y+HR GRTARA + G+ + +L
Sbjct: 530 TTDLMSRGIDIENIANVINYDVPISSQQYVHRCGRTARANKDGKAYNML 578
>sp|P53734|DBP6_YEAST ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP6 PE=1 SV=1
Length = 629
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 254 KRQINRLRCIIIVPTKLL---------------------------------------INQ 274
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 275 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILI 523
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>sp|A6ZSB3|DBP6_YEAS7 ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP6 PE=3 SV=1
Length = 629
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 133/512 (25%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
R + LR ++++PT+ L + Q
Sbjct: 254 KRQINRLRCIIIVPTKLL---------------------------------------INQ 274
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
V + L V +A ++S+ DE +L LE DIL
Sbjct: 275 VYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLEP-----------------DIL 314
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
+ TPGRL+DH+N + L++L +L++DE DRLL +++Q W P ++ ++D +
Sbjct: 315 ITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDT---- 369
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLT 334
LP ++KM+ SATLT + KL L+L+ P LFL
Sbjct: 370 ---LPG-----------------------NVIKMIFSATLTTNTEKLNGLNLYKPKLFLK 403
Query: 335 TGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSLGEE----KCIVFTSSVESTHR 386
+ Y+LP +L + + +S KPL L+ ++ Q + K ++F S ES+ R
Sbjct: 404 QTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIR 463
Query: 387 LCTLLNHFGELRIKIKEYSGLQR-------------QSVRSKTLKAF----REGKIQVLV 429
L LL E R + LQ ++ K + F I +L+
Sbjct: 464 LSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILI 523
Query: 430 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL-HKDEVKRFKK 488
++D M+RG+D+ + V+NYD P + Y+HR GRTARA +LG + LL + E F
Sbjct: 524 TTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDD 583
Query: 489 LLQKADNDSCPIH--SIPSSLIESLRPVYKSG 518
L + D D + + +L+ES +Y S
Sbjct: 584 LNKDLDRDGKSVQPLELDFTLLESDSELYTSS 615
>sp|Q6CKZ4|DBP6_KLULA ATP-dependent RNA helicase DBP6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP6 PE=3 SV=1
Length = 630
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 218/475 (45%), Gaps = 122/475 (25%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
LD RL + + S FP+Q ++ + + LF R D+ +N+ TGSGK
Sbjct: 182 LDARLLKNITSNFSSETFPIQTILFDKVLPLLNSSFKANRKLFTRRVGDILVNASTGSGK 241
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMC 142
TL+Y++P+VQ L +R V +RA++++PT+
Sbjct: 242 TLAYSVPLVQILRSRTVNKVRAIILVPTK------------------------------- 270
Query: 143 VQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPE 202
I + QV D + ++ L+V ++ ++S+ +E ++
Sbjct: 271 --------ILIHQVYDCLSKLSQGTSLNVSMSKLENSLKEEHNKF--------------- 307
Query: 203 DVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQ 262
L ++ DIL+ TPGRL+DH+ F L+ L +LV+DE DRLL +++Q W +
Sbjct: 308 -----LYNSPDILIITPGRLVDHLQM-ESFDLKTLKFLVLDEADRLLNQSFQNWNQVLFH 361
Query: 263 LTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKL 322
+D ++ +R G ++KMV SATLT + KL
Sbjct: 362 HLTNDKQD-------------------KRPG-----------NVIKMVFSATLTTNAEKL 391
Query: 323 AQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEE-----K 373
L LH+P +FLT Y +P++L+ + +S KPL L+ ++ + K
Sbjct: 392 YNLYLHNPKIFLTDSVKLYSIPKKLQELNVNIPTAKSLFKPLLLLRIIHDIKSSASRNAK 451
Query: 374 CIVFTSSVESTHRLCTLLNHFGELRIKIKEY--------SGLQRQSVRSKTLKAF--REG 423
+VF S E++ RL +LL+ I EY S + + S R K ++ F E
Sbjct: 452 ILVFVKSNEASIRLESLLHAMLGSGIIEDEYNMFLSSIHSNISKGSSR-KLIQEFASSEQ 510
Query: 424 KIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
K VL+S+D M RG+D+ + +V+NYD P + Y+HR GRTARA G LL
Sbjct: 511 KKSVLISTDIMARGIDINEITHVINYDLPISSQQYVHRCGRTARANTEGIAINLL 565
>sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=RRP3 PE=3 SV=1
Length = 485
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 194/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G S P+Q E+I L RDL + TGSGKT ++ALPI+Q L N+ +
Sbjct: 73 ACEALGYKSPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMNKP-QS 127
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L L++ PTR+LA Q++ A F
Sbjct: 128 LFGLILAPTRELACQISEA---------------------------------------FE 148
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 149 ALGSLISVRCAVIVGGMDMVSQAISLGKKPH---------------------IIVATPGR 187
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 188 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 232
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 233 E-------RRT----------------YLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + IVFT +V T RL LL G I +
Sbjct: 270 TVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPL 329
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P+ KTYIHR
Sbjct: 330 H---GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHR 386
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G F+++ + +++
Sbjct: 387 VGRTARAGKSGHAFSIVTQYDIE 409
>sp|Q751D1|DBP6_ASHGO ATP-dependent RNA helicase DBP6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP6
PE=3 SV=1
Length = 607
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 208/452 (46%), Gaps = 115/452 (25%)
Query: 52 FPVQVAVWQE---------TIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 99
FP+Q A+ ++ + R D+ +N+ TGSGKTL+YA+ ++ LS R V
Sbjct: 185 FPIQTALLDSVLPLMSQAYSVSKRYYTRKVGDILVNASTGSGKTLAYAMLLIHILSRRTV 244
Query: 100 RCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDV 159
LRA++++PT+ L + QV D
Sbjct: 245 NKLRAVILVPTKLL---------------------------------------VHQVYDT 265
Query: 160 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 219
A+A + V ++ +S+ +E ++L + +P D+L+ TP
Sbjct: 266 VQALAKGSSVVVAVSKMDTSLKEESAKLKAQ---------EP-----------DVLIITP 305
Query: 220 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 279
GRL+DH+N + F+L++L +LV+DE DRLL +++Q W
Sbjct: 306 GRLVDHLN-MQTFSLKNLKFLVLDEADRLLNQSFQNWC---------------------- 342
Query: 280 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 339
++ + R ER FK ++KM+ SATLT + +L L LH+P G
Sbjct: 343 ------IELMTRLNAERPFKGPG--NVIKMIFSATLTTNTERLHDLQLHNPKLFLMGSQL 394
Query: 340 YKLPERLESYKL---ICESKLKPLYLVALLQSLGEE--KCIVFTSSVESTHRLCTLL--- 391
Y +P +L+ Y L +S KPL L+ LL L E + +VF S E++ RL LL
Sbjct: 395 YHMPAQLQEYNLPIPTSKSYAKPLILLRLLPLLSTESLRILVFVKSNEASIRLAALLTAM 454
Query: 392 --NHFGELRIKIKEYSGLQRQSVRSKTLKAFR---EGKIQVLVSSDAMTRGMDVEGVNNV 446
N + + + ++ K ++AF G +LVS+D M+RG+D+ G+++V
Sbjct: 455 VGNGLSAVSTTVGSINNNNSKATNRKLIEAFAAGASGHCSILVSTDLMSRGLDISGISHV 514
Query: 447 VNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 478
+NYD P + Y+HR GRTARA G LL
Sbjct: 515 INYDLPISSQQYVHRCGRTARANTSGTAVNLL 546
>sp|Q6CDN5|DBP6_YARLI ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP6 PE=3 SV=1
Length = 607
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 223/498 (44%), Gaps = 101/498 (20%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--W-- 59
++K + P +R+ V + + D L + L +G + F VQ AV W
Sbjct: 165 SRKTQLQTQPILRNATYVEIDDVGSFDEFD-LSKNMMKNLDTLGYTKAFSVQKAVIPWLL 223
Query: 60 --QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
Q+ + P + DL +++ TGSGKT +Y +PI++ L +R V +RA+VVLPT+ L +Q
Sbjct: 224 AQQKLLAPDR-KPDLLVSASTGSGKTATYGIPIIEKLRDRIVPRIRAVVVLPTKPLVMQ- 281
Query: 118 NSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQ 177
V+DV ++ LSV
Sbjct: 282 --------------------------------------VRDVLENLSKGSSLSV------ 297
Query: 178 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHL 237
++ ++ S +R LE DI+VA PGRL++ + ++
Sbjct: 298 VALRNDRSTKRERAVLETA----------------DIVVAAPGRLVEQVKENPEL-FSYI 340
Query: 238 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 297
+LVVDE DRLL + Y W +VLQ +N+ R T L + +R
Sbjct: 341 EFLVVDEADRLLGQDYYDW-ASVLQ----NNQQRAQAGKTNLTEHY-----VRN------ 384
Query: 298 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKLICESK 356
+ ++ SATLT +P +A +D+H+P +F+ Y +P+ L +
Sbjct: 385 --------MQTLIFSATLTANPEHIASMDIHNPGVFVIGSSDSYSIPKSLTEIVTHVSAA 436
Query: 357 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN----HFGELRIKIKEYSGLQRQSV 412
KPL L LL + +VFT S E+ R+ ++ KI S
Sbjct: 437 EKPLMLCELLVQRDINRGVVFTKSSETAARVARMMEIMDADIFHKDWKIAAVSAETSSVH 496
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +++K F +GKI LV +D ++RG+D V+NV+NYD P+ + Y+HR GRTARAG+ G
Sbjct: 497 RRRSMKQFIDGKIDFLVCTDLVSRGIDF-VVDNVINYDIPSGKREYVHRVGRTARAGREG 555
Query: 473 RCFTLL-HKDEVKRFKKL 489
+T L E K F+++
Sbjct: 556 NAYTFLTGSGEAKWFREI 573
>sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain
RS) GN=RRP3 PE=3 SV=1
Length = 474
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 194/437 (44%), Gaps = 104/437 (23%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ F A+ + +
Sbjct: 128 LAYQISQQ---------------------------------------FEALGSLISVRCA 148
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + + L K+P I+VATPGRL+DH+ T+GF
Sbjct: 149 VIVGGMDMVSQAIALGKKPH---------------------IIVATPGRLLDHLENTKGF 187
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
+L L YLV+DE DRLL + L +L++ LP RR
Sbjct: 188 SLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPKE-------RRT 225
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
+ SAT++ L + L +PL ++ +Y+ L LI
Sbjct: 226 ----------------YLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLI 269
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
K K +YL+ LL + I+FT +V T RL LL G I + G QS
Sbjct: 270 IPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLH---GQLSQSA 326
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R L FR +LV++D RG+D+ V+ V+NYD P+ KTYIHR GRTARAG+ G
Sbjct: 327 RLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSG 386
Query: 473 RCFTLLHKDEVKRFKKL 489
R F+L+ + +V+ ++++
Sbjct: 387 RAFSLVTQYDVEIWQRI 403
>sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47
PE=2 SV=1
Length = 457
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 106 LAFQIS---------------------------------------EQFEALGSSIGVQCA 126
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 127 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 165
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 166 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 205
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 206 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 246
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 247 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 303
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 304 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 363
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 364 KAITFVTQYDVELFQRI 380
>sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus GN=Ddx47
PE=2 SV=2
Length = 455
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQCA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IVIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y L
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYLF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47
PE=1 SV=1
Length = 455
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 197/437 (45%), Gaps = 105/437 (24%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVG 172
LA Q++ + F A+ ++G+
Sbjct: 104 LAFQIS---------------------------------------EQFEALGSSIGVQSA 124
Query: 173 LAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGF 232
+ VG + L K+P I++ATPGRL+DH+ T+GF
Sbjct: 125 VIVGGIDSMSQSLALAKKPH---------------------IIIATPGRLIDHLENTKGF 163
Query: 233 TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC 292
L L YLV+DE DR+L ++ + +L++ D + TFL
Sbjct: 164 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-------TFL------------- 203
Query: 293 GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLI 352
SAT+T+ KL + L +P+ ++Y+ E+L+ Y +
Sbjct: 204 ------------------FSATMTKKVQKLQRAALKNPVKCAVS-SKYQTVEKLQQYYIF 244
Query: 353 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 412
SK K YLV +L L ++F S+ +T R LL + G I + G QS
Sbjct: 245 IPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL---HGQMSQSK 301
Query: 413 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 472
R +L F+ +L+++D +RG+D+ V+ VVN+D P + K YIHR GRTARAG+ G
Sbjct: 302 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 361
Query: 473 RCFTLLHKDEVKRFKKL 489
+ T + + +V+ F+++
Sbjct: 362 KAITFVTQYDVELFQRI 378
>sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRP3 PE=3 SV=2
Length = 477
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 194/444 (43%), Gaps = 107/444 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A+Q M + P+Q E I L +D+ + TGSGKT ++A+PI+Q L
Sbjct: 72 LIPELLEAIQQMKFTKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQAL 127
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A LV+ PTR+LA Q+
Sbjct: 128 WE-AQAAYYGLVLAPTRELAYQI------------------------------------- 149
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
K+ F A+ ++GL VG + D+ +L+++P I
Sbjct: 150 --KETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPH---------------------I 186
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
LVATPGR+MDH+ T+GF+L++L YLV+DE DRLL + L +L++ +
Sbjct: 187 LVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKIIPTQR------ 240
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + LH+P+ +
Sbjct: 241 -TTYL-------------------------------FSATMTNKIAKLQRASLHNPVRVA 268
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ K YL+ LL + I+FT + + R L
Sbjct: 269 VS-NKYQTADNLVQSMMLVSDGYKNTYLIHLLNEFLGKSIIIFTRTCAHSQRTALLARIL 327
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G Q+ R +L F+ GK +L+++D RG+D+ V+ V+NYD P
Sbjct: 328 GFSAVPL---HGQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIPTD 384
Query: 455 IKTYIHRAGRTARAGQLGRCFTLL 478
K YIHR GRTARAG+ G+ +L+
Sbjct: 385 SKAYIHRVGRTARAGKSGKSISLI 408
>sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 OS=Homo sapiens GN=DDX27
PE=1 SV=2
Length = 796
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 215/482 (44%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 228 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 282
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ QF
Sbjct: 283 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTRQLAQF--------- 315
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
++ LAVG + + EA L++A DI
Sbjct: 316 ------------CNITTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 342
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 343 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 388
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 389 --------------IRMCSHHR----------QTMLFSATMTDEVKDLASVSLKNPVRIF 424
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 425 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLG 484
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 485 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 541
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ +DE K K++++ A P+ + +P +I
Sbjct: 542 NTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAA---KAPVKARILPQDVILK 598
Query: 511 LR 512
R
Sbjct: 599 FR 600
>sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus GN=DDX27
PE=2 SV=1
Length = 765
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 217/482 (45%), Gaps = 115/482 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-- 94
P LK A+ MG P+Q A I GL +D+C + TG+GKT ++ALP+++ L
Sbjct: 197 PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICACAATGTGKTAAFALPVLERLIY 251
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
R R LV++PTR+L +QV HS+ + QF S+
Sbjct: 252 KPRQAPVTRVLVLVPTRELGIQV------------------HSVTKQLAQFCSI------ 287
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
+ LAVG + + EA L++A DI
Sbjct: 288 ---------------TTCLAVGGLDVKSQ----------EAA-----------LRAAPDI 311
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
L+ATPGRL+DH++ F L + L++DE DR+L E ++ + +
Sbjct: 312 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEI-------------- 357
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
IR C R M+ SAT+T + LA + L +P+ +
Sbjct: 358 --------------IRMCSHHRQ----------TMLFSATMTDEVKDLASVSLKNPVRIF 393
Query: 335 TGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN 392
P + + I ++ + + ALL + ++FT + + HR+ LL
Sbjct: 394 VNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLG 453
Query: 393 HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP 452
G +++ E G Q+ R + L+ F++ +I +LV++D RG+D+EGV V+N+ P
Sbjct: 454 LMG---LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 510
Query: 453 AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHS--IPSSLIES 510
IK Y+HR GRTARAG+ GR +L+ ++E K K++++ A P+ + +P +I
Sbjct: 511 NTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAA---KAPVKARILPQDVILK 567
Query: 511 LR 512
R
Sbjct: 568 FR 569
>sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=RRP3 PE=3 SV=2
Length = 539
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 203/452 (44%), Gaps = 107/452 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L ++++M + P+Q E I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 130 LVPDLLESIESMKFTKPTPIQ----SEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSL 185
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A + ALV+ PTR+L Q+
Sbjct: 186 WH-AQQPYFALVLAPTRELTFQI------------------------------------- 207
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
KD F A+ ++GL VG + D+ +L+++P +
Sbjct: 208 --KDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPH---------------------V 244
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
+VATPGR+MDH+ T+GF+L++L YLV+DE DRLL + L +L++
Sbjct: 245 IVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKV----------- 293
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+P I+R + SAT+T KL + LH+P+ +
Sbjct: 294 ----IP--------IKRT---------------TYLFSATMTNKIEKLQRASLHNPVRVA 326
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
++Y+ + L ++ K L+ LL + IVFT +V R L
Sbjct: 327 VS-SKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARIL 385
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G QS R +L F+ + +LV++D RG+D+ V+ V+NYD P
Sbjct: 386 GFNAVPL---HGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTD 442
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF 486
K YIHR GRTARAG+ G+ +L+ + +++ +
Sbjct: 443 SKAYIHRVGRTARAGRSGKSISLITQYDLEMY 474
>sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rrp3 PE=3 SV=1
Length = 465
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 195/448 (43%), Gaps = 107/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q QE I L +RD+ + TGSGKT ++ALP++Q L N
Sbjct: 60 ACEKLGFKTPTPIQ----QEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPF 115
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
A+V+ PTR+LA Q++ + F
Sbjct: 116 F-AVVLAPTRELAYQIS---------------------------------------EQFE 135
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
AI ++G+ + VG + + L K+P +LV TPGR
Sbjct: 136 AIGGSIGVRSVVIVGGMDMVTQAVALSKKPH---------------------VLVCTPGR 174
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
LMDH+ T+GF+L++L YL++DE DRLL + + +L++
Sbjct: 175 LMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKII----------------- 217
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
P+ R ++ SAT+T KL + LH P+ + +++
Sbjct: 218 --------------------PHERRT-LLFSATMTSKVEKLQRASLHQPVRVAVS-SKFS 255
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
+ L L K K YLV L+ L I+F +V T RL LL G I +
Sbjct: 256 TVDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPL 315
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L F+ G LV++D RG+D+ V+ V+NYD P K YIHR
Sbjct: 316 ---HGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHR 372
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G+ L+ + +++ F ++
Sbjct: 373 VGRTARAGRAGKSIALVTQYDLEPFLRI 400
>sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=RRP3 PE=3 SV=2
Length = 475
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 193/444 (43%), Gaps = 107/444 (24%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A++ + + P+Q I L +D+ + TGSGKT ++A+PI+Q+L
Sbjct: 71 LVPELMEAIEKLKYTKPTPIQSGA----IPHALEGKDIIGLAQTGSGKTAAFAIPILQSL 126
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
A R ALV+ PTR+LA Q+
Sbjct: 127 WE-AQRPYYALVLAPTRELAYQI------------------------------------- 148
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
K+ F A+ +G+ VG + D+ +L+++P I
Sbjct: 149 --KETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPH---------------------I 185
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
LVATPGR+MDH+ T+GF+L+ L YLV+DE DRLL + L +L++ +
Sbjct: 186 LVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILKVIPTKR------ 239
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T KL + LH P+ +
Sbjct: 240 -TTYL-------------------------------FSATMTNKIAKLQRASLHEPVKVA 267
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ K +L+ LL + IVFT + T R L
Sbjct: 268 VS-NKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFTRTCAHTQRSTLLARIL 326
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
G + + G QS R +L F+ GK +L+++D RG+D+ V+ V+NYD P
Sbjct: 327 GFSAVPL---HGQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTD 383
Query: 455 IKTYIHRAGRTARAGQLGRCFTLL 478
K YIHR GRTARAG+ G+ +L+
Sbjct: 384 SKAYIHRVGRTARAGKSGKSISLV 407
>sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=drs1 PE=3 SV=1
Length = 754
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 209/453 (46%), Gaps = 108/453 (23%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 103
G+S+L F V + +TI L +D+ + TGSGKT ++ +PI++ L R V R
Sbjct: 273 GLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTR 332
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
L++ PTR+LA+Q C HS+A F ++
Sbjct: 333 VLILCPTRELAMQ---------C---------HSVATKIASFTDIM-------------- 360
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
V L +G S+ + EL KRP DI++ATPGR +
Sbjct: 361 -------VCLCIGGLSLKLQEQELRKRP---------------------DIVIATPGRFI 392
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DH+ ++GFT+E++ +V+DE DR+L + + L ++Q
Sbjct: 393 DHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQA-------------------- 432
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL--FLTTGETRYK 341
C P R M+ SAT+T + L +L L+ P+ F+ +T K
Sbjct: 433 --------C---------PKSRQT-MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAK 474
Query: 342 LPERLESYKLICESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
L + E ++ + +L +P L+ L + L + I+F S H++ + FG L +
Sbjct: 475 LLTQ-EFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVI---FGLLSLN 530
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
E G Q R + L+ FR+GK L+++D +RG+D++G+ V+NY+ PA + Y+H
Sbjct: 531 ATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLH 590
Query: 461 RAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKA 493
R GRTARAG+ GR TL + + K K + + +
Sbjct: 591 RVGRTARAGRSGRAITLAGEGDRKVLKGVFKNS 623
>sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rrp3 PE=3 SV=1
Length = 473
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 195/444 (43%), Gaps = 108/444 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A MG + P+Q E+I L +RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 67 ACATMGYKAPTPIQA----ESIPLALQDRDLIGLAETGSGKTAAFALPILQALMDKP-QS 121
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA Q++ + F
Sbjct: 122 FFGLVLAPTRELAFQISQS---------------------------------------FE 142
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 143 ALGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGR 181
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 182 LLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKIL--PRERR-----TFL-- 232
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT++ L + L +PL ++ +Y+
Sbjct: 233 -----------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQ 263
Query: 342 -LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
+ L+SY+ I K K +YLV LL + I+FT +V T R+ LL G I
Sbjct: 264 TVSTLLQSYRFIPH-KHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIP 322
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
+ G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+H
Sbjct: 323 LH---GQLSQSSRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVH 379
Query: 461 RAGRTARAGQLGRCFTLLHKDEVK 484
R GRTARAG+ G + + + +V+
Sbjct: 380 RVGRTARAGKSGVAISFVTQYDVE 403
>sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rrp-3 PE=3 SV=1
Length = 515
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 189/437 (43%), Gaps = 106/437 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 104 ACERLGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-P 158
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L ALV+ PTR+LA Q+ A F
Sbjct: 159 LFALVLAPTRELAAQIAQA---------------------------------------FE 179
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + L L +G + + L K+P ++VATPGR
Sbjct: 180 ALGSLISLRCALILGGMDMVTQAIALGKKPH---------------------VIVATPGR 218
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L + YLV+DE DRLL + L +L+ FLP
Sbjct: 219 LLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILK---------------FLPR 263
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ +Y
Sbjct: 264 E-------RRT----------------FLFSATMSSKVESLQRASLRDPLKVSVSSNKYA 300
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L+S + K YLV L + I+FT +V T R+ LL G I +
Sbjct: 301 TVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL 360
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
+ GL QS R L FR G ++LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 361 --HGGLS-QSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHR 417
Query: 462 AGRTARAGQLGRCFTLL 478
GRTARAG+ G +++
Sbjct: 418 VGRTARAGKSGHAISIV 434
>sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1
Length = 467
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 193/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 62 ACETMGYKAPTPIQ----RESIPLALKGRDLIGLAETGSGKTAAFALPILQALMEKP-QP 116
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
LV+ PTR+LA Q++ + F
Sbjct: 117 FFGLVLAPTRELAYQISKS---------------------------------------FE 137
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ ++G+ + VG + + L K+P I+VATPGR
Sbjct: 138 SLGASMGVRSCVIVGGMDMVSQSISLGKKPH---------------------IIVATPGR 176
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YLV+DE DRLL + L +L++ E R TFL
Sbjct: 177 LLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVL--PRERR-----TFL-- 227
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
SAT++ L + L +PL ++ ++Y+
Sbjct: 228 -----------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQ 258
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K LYLV LL + I+FT +V T RL LL G I +
Sbjct: 259 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 318
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P +Y+HR
Sbjct: 319 H---GQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHR 375
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 376 VGRTARAGKSGLAISFVAQYDVE 398
>sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DRS1 PE=3 SV=2
Length = 705
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 210/489 (42%), Gaps = 123/489 (25%)
Query: 47 GISSL-FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR--AVRCLR 103
G+ +L + V A+ +I + +D+ + TGSGKT +Y +PI++ L + AV R
Sbjct: 212 GVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIERLIYKPAAVSATR 271
Query: 104 ALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAI 163
+V+ PTR+LA+QV C + + QF
Sbjct: 272 VIVLTPTRELAIQV--------C----------DVGKKLGQF------------------ 295
Query: 164 APAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLM 223
L+ GLAVG ++ + +L RP DI+VATPGRL+
Sbjct: 296 --VANLNFGLAVGGLNLRQQEQQLKSRP---------------------DIVVATPGRLI 332
Query: 224 DHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAF 283
DHI + F++E+L LV+DE DR+L E +Q L +L+L
Sbjct: 333 DHIRNSPSFSIENLEVLVMDEADRMLEEGFQVELTEILELI------------------- 373
Query: 284 GSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLP 343
P + M+ SAT+ L QL L P+ + P
Sbjct: 374 ------------------PKHKRQTMLFSATMNTKIQDLIQLSLDKPVRIMVN------P 409
Query: 344 ERLESYKLICE-------SKLKPLYLVALLQSLG---EEKCIVFTSSVESTHRLCTLLNH 393
+ + KL+ E LKP L LL+ + + + +VF S E HRL +L
Sbjct: 410 PKQAASKLVQEFVRIRKREHLKPALLYHLLRLVDPQQQNRIVVFVSRKEMAHRLRIVL-- 467
Query: 394 FGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPA 453
G L +K+ E G Q R +++K FR + VL+ +D RG+D+ + V+N+D P
Sbjct: 468 -GLLGMKVSELHGSLTQEQRLQSVKDFRSLAVPVLICTDLAARGLDIPKIEIVINFDMPK 526
Query: 454 YIKTYIHRAGRTARAGQLGRCFTLLHKDE-----VKRFKKLLQKADNDSCPIHSIPSSLI 508
+ Y+HR GRTARAG+ GR T + + VK K L++ N ++ +
Sbjct: 527 THEIYLHRVGRTARAGREGRSITFVGESNQDRSIVKDAIKSLEEQKNGKAVSRTVDWKKV 586
Query: 509 ESLRPVYKS 517
E L + +S
Sbjct: 587 EELNSIVES 595
>sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRP3 PE=3 SV=1
Length = 551
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 193/453 (42%), Gaps = 107/453 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P++ A NMG P+QV E L RD+ + TGSGKT ++ +PI+Q L +
Sbjct: 113 PQIVEACTNMGFKHPTPIQVKAIPEA----LQARDVIGLAQTGSGKTAAFTIPILQALWD 168
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
+ A V+ PTR+LA Q++ QV
Sbjct: 169 NP-KPFFACVLAPTRELAYQISQ-----------------------------------QV 192
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
+ A+ +G+ VG + + L KRP ++V
Sbjct: 193 E----ALGSTIGVRSATIVGGMDMMSQSIALSKRPH---------------------VIV 227
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRL DH+ T+GF+L L YLV+DE DRLL + + +LQ
Sbjct: 228 ATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ-------------- 273
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
S+ RR M+ SAT+T KL + L +P+ +
Sbjct: 274 --------SIPRERRT----------------MLFSATMTTKVAKLQRASLKNPVRVEV- 308
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+T+Y L+ + + K YLV L IVFT +V + RL LL G
Sbjct: 309 DTKYTTVSTLKQHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGF 368
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
I + G Q R L F+ G +LV++D +RG+D+ V+ VVNYD P K
Sbjct: 369 PAIPLH---GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSK 425
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKL 489
YIHR GRTARAG+ GR TL+ + +V+ +++
Sbjct: 426 DYIHRVGRTARAGRSGRSVTLVTQYDVELLQRI 458
>sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp.
japonica GN=Os03g0669000 PE=2 SV=1
Length = 472
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 196/477 (41%), Gaps = 108/477 (22%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL-S 95
P L A MG +Q E I L RDL TGSGKT ++ALPI+Q L
Sbjct: 50 PELVAACDAMGWKEPTRIQA----EAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLK 105
Query: 96 NRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQ 155
+ L A V+ PTR+LA Q+
Sbjct: 106 QDKPQALFACVLSPTRELAFQIGQQ----------------------------------- 130
Query: 156 VKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDIL 215
F A+ A+GLS + VG + L KRP I+
Sbjct: 131 ----FEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPH---------------------IV 165
Query: 216 VATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDA 275
V TPGRL+DH+ T+GF+L L YLV+DE D+LL +Q L +L + +
Sbjct: 166 VGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERR------ 219
Query: 276 STFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT 335
TFL SAT+T +KL + L +P+ +
Sbjct: 220 -TFL-------------------------------FSATMTNKVSKLQRACLRNPVKVEV 247
Query: 336 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFG 395
++Y + L + K +LV +L L ++F + EST L L +
Sbjct: 248 A-SKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRN-- 304
Query: 396 ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYI 455
LR K SG Q R L F+ +L+ +D +RG+D++GV+ V+NYD P
Sbjct: 305 -LRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNS 363
Query: 456 KTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
K Y+HR GRTARAG G +L+++ E F K+++K P + ++ I LR
Sbjct: 364 KDYVHRVGRTARAGNTGYAVSLVNQYEAMWF-KMIEKLLGYEIPDRKVDNAEIMILR 419
>sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3
PE=3 SV=1
Length = 472
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 189/443 (42%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L + +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKP-QS 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L++ PTR+LA Q++ + F
Sbjct: 121 FFGLILAPTRELAFQISKS---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ + + + VG + + L K+P I+VATPGR
Sbjct: 142 SLGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 181 LLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKV---------------LPR 225
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 226 E-------RRT----------------FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 323 H---GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 380 VGRTARAGKSGVAISFVTQYDVE 402
>sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRP3 PE=3 SV=1
Length = 493
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 212/481 (44%), Gaps = 113/481 (23%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P L A QN+ + P+Q I P L D+ + TGSGKT ++A+PI+ L
Sbjct: 80 LVPELIQACQNLNFTKPTPIQA----RAIPPALAGSDVIGLAQTGSGKTAAFAIPILNKL 135
Query: 95 SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLP 154
+ A V+ PTR+LA
Sbjct: 136 WEDQ-QPYYACVLAPTRELA---------------------------------------Q 155
Query: 155 QVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDI 214
Q+K+ F ++ +G+ VG ++ D+ +L+++P I
Sbjct: 156 QIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPH---------------------I 194
Query: 215 LVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD 274
++ATPGRLMDH+ T+GF+L++L +LV+DE DRLL + L +L++ +
Sbjct: 195 IIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIPTKGR----- 249
Query: 275 ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLT 334
+T+L SAT+T +KL + L +P+
Sbjct: 250 -TTYL-------------------------------FSATMTSKIDKLQRASLTNPVKCA 277
Query: 335 TGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHF 394
+Y+ + L ++ LK +L+ LL + I+FT + + RL L N
Sbjct: 278 V-SNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTVIIFTRTKANAERLSGLCNL- 335
Query: 395 GELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAY 454
L G Q+ R+ L F+ GK +LV++D RG+D+ V+ V+NYD P
Sbjct: 336 --LEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVD 393
Query: 455 IKTYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESL 511
K+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +L
Sbjct: 394 SKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTL 449
Query: 512 R 512
R
Sbjct: 450 R 450
>sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1
Length = 482
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 191/443 (43%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q+L ++ +
Sbjct: 70 ACDTLGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQSLLDKP-QP 124
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ + F
Sbjct: 125 LFGLVLAPTRELAYQISQS---------------------------------------FE 145
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 146 ALGSIIRVKCAVIVGGMDMVPQAIALGKKPH---------------------IIVATPGR 184
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 185 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 229
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ +Y+
Sbjct: 230 E-------RRT----------------YLFSATISSKVESLQRASLKDPLRVSISSNKYQ 266
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K YL+ LL + I+FT +V T R+ LL G I +
Sbjct: 267 TVSTLIQNYIFIPLVHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 326
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 327 H---GQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHR 383
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 384 VGRTARAGKSGHAISFVTQYDVE 406
>sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus GN=Ddx27
PE=1 SV=3
Length = 760
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 225/503 (44%), Gaps = 121/503 (24%)
Query: 17 SPVDVSL-FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN 75
S D SL F+D L P LK A+ MG P+Q A I GL +D+C
Sbjct: 178 SEYDKSLSFQDMNLSR-----PLLK-AITAMGFKQPTPIQKAC----IPVGLLGKDICAC 227
Query: 76 SPTGSGKTLSYALPIVQTL--SNRAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLI 133
+ TG+GKT ++ALP+++ L R R LV++PTR+L +QV
Sbjct: 228 AATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQV---------------- 271
Query: 134 ADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 193
HS+ + QF S+ + LAVG + +
Sbjct: 272 --HSVTKQLAQFCSI---------------------TTCLAVGGLDVKSQ---------- 298
Query: 194 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 253
EA L++A DIL+ATPGRL+DH++ F L + L++DE DR+L E +
Sbjct: 299 EAA-----------LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 347
Query: 254 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 313
+ + + IR C R M+ SA
Sbjct: 348 EEQMKEI----------------------------IRMCSHHRQ----------TMLFSA 369
Query: 314 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKL--KPLYLVALLQSLGE 371
T+T + LA + L +P+ + P + + I ++ + + ALL
Sbjct: 370 TMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFT 429
Query: 372 EKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSS 431
+ ++FT + + HR+ LL L +++ E G Q+ R + L+ F++ +I +LV++
Sbjct: 430 DHVMLFTQTKKQAHRMHILLGL---LGLQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 486
Query: 432 DAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ 491
D RG+D+EGV V+N+ P +K Y+HR GRTARAG+ GR +L+ ++E K K++++
Sbjct: 487 DVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVK 546
Query: 492 KADNDSCPIHS--IPSSLIESLR 512
A P+ + +P +I R
Sbjct: 547 AA---KAPVKARILPQDVILKFR 566
>sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rrp3
PE=3 SV=1
Length = 472
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 188/443 (42%), Gaps = 106/443 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + MG + P+Q E+I L RDL + TGSGKT ++ALPI+Q L +
Sbjct: 66 ACETMGYKAPTPIQA----ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMENP-QS 120
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L++ PTR+LA Q++ + F
Sbjct: 121 FFGLILAPTRELAFQISKS---------------------------------------FE 141
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
++ + + + VG + + L K+P I+VATPGR
Sbjct: 142 SLGSTINVRCAVIVGGMDMVSQSIALGKKPH---------------------IIVATPGR 180
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 181 LLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKV---------------LPR 225
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L +PL ++ +Y+
Sbjct: 226 E-------RRT----------------FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L L K K +YLV LL + I+FT +V T R+ LL G I +
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR +LV++D RG+D+ V+ V+N+D P KTY+HR
Sbjct: 323 H---GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHR 379
Query: 462 AGRTARAGQLGRCFTLLHKDEVK 484
GRTARAG+ G + + + +V+
Sbjct: 380 VGRTARAGKSGVAISFVTQYDVE 402
>sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rrp3 PE=3 SV=1
Length = 465
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 191/444 (43%), Gaps = 109/444 (24%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +NMG + P+Q + I L RD+ + TGSGKT ++ALP++Q L A +
Sbjct: 60 ACENMGYKAPTPIQ----SQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALME-APQT 114
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ A F
Sbjct: 115 LFGLVLAPTRELAYQISQA---------------------------------------FE 135
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
+ +G+ + VG + + L K+P I+VATPGR
Sbjct: 136 TLGSTIGVRCAVIVGGMDMVAQSIALGKKPH---------------------IIVATPGR 174
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L +L YL +DE DRLL + L ++++
Sbjct: 175 LLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRI------------------ 216
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVL-SATLTQDPNKLAQLDLHHPLFLTTGETRY 340
PR L SAT++ L + L +P+ ++ ++Y
Sbjct: 217 ---------------------LPRTRHTYLFSATMSTKVESLQRASLSNPVRVSV-SSKY 254
Query: 341 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 400
+ L+S + K K LYLV LL + I+FT++V T R+ +L G I
Sbjct: 255 QTVSTLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIP 314
Query: 401 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 460
+ G QS R L FR +LV++D RG+D+ V+ V N+D P KTYIH
Sbjct: 315 LH---GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIH 371
Query: 461 RAGRTARAGQLGRCFTLLHKDEVK 484
R GRTARAG+ G + + + +V+
Sbjct: 372 RVGRTARAGKSGVAISFVTQYDVE 395
>sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis
elegans GN=T26G10.1 PE=3 SV=1
Length = 489
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 107/434 (24%)
Query: 58 VWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN--RAVRCLRALVVLPTRDLAL 115
+ Q + L +D+ + TGSGKT ++A+P++Q+L + +A CL V+ PTR+LA
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCL---VLTPTRELAF 126
Query: 116 QVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFAAIAPAVGLSVGLAV 175
Q+ F A+ +GL + V
Sbjct: 127 QIGQQ---------------------------------------FEALGSGIGLIAAVIV 147
Query: 176 GQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLE 235
G +A + L +RP I+VATPGRL+DH+ T+GF L+
Sbjct: 148 GGVDMAAQAMALARRPH---------------------IIVATPGRLVDHLENTKGFNLK 186
Query: 236 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVE 295
L +L++DE DR+L ++ L +L++ + T+L
Sbjct: 187 ALKFLIMDEADRILNMDFEVELDKILKVIPRERR-------TYL---------------- 223
Query: 296 RGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICES 355
SAT+T+ +KL + L P ++ +RYK + L+ + + +
Sbjct: 224 ---------------FSATMTKKVSKLERASLRDPARVSV-SSRYKTVDNLKQHYIFVPN 267
Query: 356 KLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSK 415
K K YLV LL IVF ++ +T ++ +L G + + G Q R
Sbjct: 268 KYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPL---HGQMSQEKRLG 324
Query: 416 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCF 475
+L F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G
Sbjct: 325 SLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAI 384
Query: 476 TLLHKDEVKRFKKL 489
T++ + +V+ ++K+
Sbjct: 385 TVVTQYDVEAYQKI 398
>sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain
B05.10) GN=rrp3 PE=3 SV=1
Length = 486
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 193/448 (43%), Gaps = 106/448 (23%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A +G + P+Q +E+I L RDL + TGSGKT ++ALPI+Q L ++ +
Sbjct: 74 ACDTLGYKAPTPIQ----RESIPLALQGRDLIGLAETGSGKTAAFALPILQALLDKP-QP 128
Query: 102 LRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVKDVFA 161
L LV+ PTR+LA Q++ F
Sbjct: 129 LFGLVLAPTRELAYQISQQ---------------------------------------FE 149
Query: 162 AIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGR 221
A+ + + + VG + + L K+P I+VATPGR
Sbjct: 150 ALGSVIRVKCAVIVGGMDMVPQSIALGKKPH---------------------IIVATPGR 188
Query: 222 LMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 281
L+DH+ T+GF+L L YLV+DE DRLL + L +L++ LP
Sbjct: 189 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV---------------LPR 233
Query: 282 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK 341
RR + SAT++ L + L PL ++ +Y+
Sbjct: 234 E-------RRT----------------YLFSATISSKVESLQRASLKDPLRVSISSNKYQ 270
Query: 342 LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKI 401
L + K YL+ LL + I+FT +V T R+ LL G I +
Sbjct: 271 TVSTLIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 330
Query: 402 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 461
G QS R L FR G ++LV++D RG+D+ V+ V+NYD P KTYIHR
Sbjct: 331 H---GQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHR 387
Query: 462 AGRTARAGQLGRCFTLLHKDEVKRFKKL 489
GRTARAG+ G +++ + +++ F ++
Sbjct: 388 VGRTARAGKSGHAISVVTQYDLEIFMRI 415
>sp|P0CQ92|DRS1_CRYNJ ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DRS1 PE=3 SV=1
Length = 808
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 203/475 (42%), Gaps = 107/475 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
AL ++ ++ P+Q I L RD+ ++ TGSGKT ++ +PI++ L +
Sbjct: 236 ALTSLQFTAPTPIQA----RAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGK 291
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
R LV+ PTR+LA+Q C+ K
Sbjct: 292 GGAACRVLVLCPTRELAVQ-----CEAVGK------------------------------ 316
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
A+A GL V A+ L G+ + + L++ DIL+A
Sbjct: 317 ----ALAEKGGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIA 353
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DH+ T FTL L LV+DE DR+L + L +
Sbjct: 354 TPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI----------------- 396
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
I+ C P R M+ SAT+T ++L +L L P+ +
Sbjct: 397 -----------IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDP 435
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
R + + I + L+AL + EKCI+F S H++ + FG
Sbjct: 436 KRNTARGLTQEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFG-- 493
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R + L F+ G + L+++D +RG+D++GV V+NYD P +
Sbjct: 494 -LKAAELHGNLTQEQRLQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQ 552
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
Y HR GRTARAG+ GR +L+ + + K K +++A+ D IPS + +++
Sbjct: 553 YTHRVGRTARAGRKGRSVSLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMK 607
>sp|P0CQ93|DRS1_CRYNB ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DRS1 PE=3 SV=1
Length = 808
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 203/475 (42%), Gaps = 107/475 (22%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL----SNR 97
AL ++ ++ P+Q I L RD+ ++ TGSGKT ++ +PI++ L +
Sbjct: 236 ALTSLQFTAPTPIQA----RAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGK 291
Query: 98 AVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQVK 157
R LV+ PTR+LA+Q C+ K
Sbjct: 292 GGAACRVLVLCPTRELAVQ-----CEAVGK------------------------------ 316
Query: 158 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 217
A+A GL V A+ L G+ + + L++ DIL+A
Sbjct: 317 ----ALAEKGGLDVRFAL-----------------LVGGLSLNAQ--AHTLRTLPDILIA 353
Query: 218 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAST 277
TPGRL+DH+ T FTL L LV+DE DR+L + L +
Sbjct: 354 TPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEI----------------- 396
Query: 278 FLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE 337
I+ C P R M+ SAT+T ++L +L L P+ +
Sbjct: 397 -----------IKAC---------PRSRQT-MLFSATMTDSVDELVKLSLDKPIRVFVDP 435
Query: 338 TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGEL 397
R + + I + L+AL + EKCI+F S H++ + FG
Sbjct: 436 KRNTARGLTQEFVRIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFG-- 493
Query: 398 RIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKT 457
+K E G Q R + L F+ G + L+++D +RG+D++GV V+NYD P +
Sbjct: 494 -LKAAELHGNLTQEQRLQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQ 552
Query: 458 YIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLR 512
Y HR GRTARAG+ GR +L+ + + K K +++A+ D IPS + +++
Sbjct: 553 YTHRVGRTARAGRKGRSVSLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMK 607
>sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2
Length = 501
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 207/479 (43%), Gaps = 113/479 (23%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVNSARCKYCCKNIFGLIADHSIAEMCVQFDSLLFISLPQV 156
A ++ PTR+LA Q+
Sbjct: 146 DQ-EPYYACILAPTRELA---------------------------------------QQI 165
Query: 157 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 216
K+ F ++ +G+ VG ++ D+ +L+++P I++
Sbjct: 166 KETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH---------------------III 204
Query: 217 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 276
ATPGRLMDH+ T+GF+L L +LV+DE DRLL + L +L++
Sbjct: 205 ATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII------------ 252
Query: 277 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG 336
P + SAT+T +KL + L +P+
Sbjct: 253 -------------------------PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVS 287
Query: 337 ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGE 396
+Y+ + L ++ LK YL+ LL + I+FT + + RL L N
Sbjct: 288 -NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNL--- 343
Query: 397 LRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIK 456
L G Q+ R +L F+ GK +LV++D RG+D+ V+ VVNYD P K
Sbjct: 344 LEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSK 403
Query: 457 TYIHRAGRTARAGQLGRCFTLLHKDEVK---RFKKLLQKADNDSCPIHSIPSSLIESLR 512
+YIHR GRTARAG+ G+ +L+ + +++ R +++L K P S+ ++I +LR
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGK----KLPKESVDKNIILTLR 458
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,008,158
Number of Sequences: 539616
Number of extensions: 7551814
Number of successful extensions: 24873
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 19552
Number of HSP's gapped (non-prelim): 3743
length of query: 520
length of database: 191,569,459
effective HSP length: 122
effective length of query: 398
effective length of database: 125,736,307
effective search space: 50043050186
effective search space used: 50043050186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)