Query 010034
Match_columns 519
No_of_seqs 345 out of 2531
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 18:25:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010034.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010034hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 2.9E-47 9.8E-52 381.8 30.2 290 14-345 9-302 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 3.4E-45 1.1E-49 365.2 34.4 274 31-343 16-290 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 4.3E-45 1.5E-49 365.1 31.9 275 31-345 12-287 (306)
4 2vpj_A Kelch-like protein 12; 100.0 7.4E-45 2.5E-49 362.3 29.9 274 30-343 14-291 (301)
5 2xn4_A Kelch-like protein 2; s 100.0 3.9E-43 1.3E-47 350.3 34.8 261 2-304 40-302 (302)
6 1zgk_A Kelch-like ECH-associat 100.0 1.1E-42 3.7E-47 348.5 33.2 256 2-300 49-308 (308)
7 3ii7_A Kelch-like protein 7; p 100.0 2E-42 6.9E-47 345.7 33.1 256 2-301 34-294 (306)
8 2vpj_A Kelch-like protein 12; 100.0 4.2E-42 1.4E-46 342.4 33.0 257 2-301 41-300 (301)
9 4asc_A Kelch repeat and BTB do 100.0 1.3E-42 4.4E-47 348.9 25.2 271 2-309 23-305 (315)
10 2uvk_A YJHT; unknown function, 100.0 5.6E-42 1.9E-46 350.0 29.9 287 15-336 5-348 (357)
11 4asc_A Kelch repeat and BTB do 100.0 7E-42 2.4E-46 343.5 27.4 261 31-336 5-283 (315)
12 2woz_A Kelch repeat and BTB do 100.0 9.9E-42 3.4E-46 342.9 27.4 271 2-309 34-315 (318)
13 2woz_A Kelch repeat and BTB do 100.0 4.9E-41 1.7E-45 337.9 31.5 271 17-336 6-293 (318)
14 2zwa_A Leucine carboxyl methyl 100.0 1.3E-38 4.3E-43 352.9 27.3 286 15-324 384-692 (695)
15 2uvk_A YJHT; unknown function, 100.0 2.6E-36 8.8E-41 308.1 25.5 253 2-285 43-351 (357)
16 2zwa_A Leucine carboxyl methyl 100.0 1.9E-33 6.5E-38 311.4 26.6 239 72-336 384-641 (695)
17 1k3i_A Galactose oxidase precu 100.0 3.3E-33 1.1E-37 308.3 19.7 306 3-345 177-512 (656)
18 1k3i_A Galactose oxidase precu 100.0 6.5E-32 2.2E-36 298.0 22.1 280 3-311 230-531 (656)
19 3mbr_X Glutamine cyclotransfer 97.8 0.0046 1.6E-07 58.4 22.6 190 77-309 21-223 (243)
20 3dsm_A Uncharacterized protein 97.7 0.053 1.8E-06 53.2 28.6 223 45-309 16-244 (328)
21 3dsm_A Uncharacterized protein 97.6 0.012 4.3E-07 57.8 23.1 207 23-277 87-303 (328)
22 3nol_A Glutamine cyclotransfer 97.5 0.017 5.9E-07 55.0 20.8 188 79-309 45-244 (262)
23 3v9f_A Two-component system se 97.4 0.012 4E-07 65.4 21.8 227 28-312 415-648 (781)
24 3mbr_X Glutamine cyclotransfer 97.3 0.072 2.5E-06 50.1 22.5 190 21-252 22-223 (243)
25 4a2l_A BT_4663, two-component 97.3 0.021 7.3E-07 63.4 22.2 232 24-312 410-651 (795)
26 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.2 6.9E-06 49.6 27.8 209 26-308 99-325 (376)
27 4ery_A WD repeat-containing pr 97.1 0.22 7.6E-06 47.6 25.4 224 29-313 33-260 (312)
28 1k8k_C P40, ARP2/3 complex 41 97.0 0.2 6.7E-06 49.0 24.1 112 28-164 17-129 (372)
29 3nok_A Glutaminyl cyclase; bet 97.0 0.046 1.6E-06 52.1 18.0 185 79-309 57-254 (268)
30 2iwa_A Glutamine cyclotransfer 97.0 0.19 6.6E-06 47.9 22.5 190 80-312 24-228 (266)
31 2iwa_A Glutamine cyclotransfer 96.9 0.3 1E-05 46.6 23.6 202 23-276 24-237 (266)
32 1l0q_A Surface layer protein; 96.9 0.14 4.7E-06 50.8 22.2 187 31-282 2-195 (391)
33 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.39 1.3E-05 47.5 25.4 196 46-308 153-366 (376)
34 3nol_A Glutamine cyclotransfer 96.9 0.094 3.2E-06 49.8 19.1 187 23-252 46-244 (262)
35 4aez_A CDC20, WD repeat-contai 96.8 0.14 5E-06 51.2 21.9 212 46-312 156-371 (401)
36 1gxr_A ESG1, transducin-like e 96.8 0.25 8.6E-06 47.2 22.3 219 29-313 107-329 (337)
37 1q7f_A NHL, brain tumor CG1071 96.8 0.38 1.3E-05 45.4 25.7 230 24-308 34-268 (286)
38 1rwi_B Serine/threonine-protei 96.7 0.27 9.3E-06 45.7 21.5 222 23-310 27-253 (270)
39 2z2n_A Virginiamycin B lyase; 96.7 0.44 1.5E-05 44.7 24.2 220 23-308 18-242 (299)
40 3bws_A Protein LP49; two-domai 96.6 0.34 1.2E-05 48.6 22.7 201 30-280 133-338 (433)
41 2hqs_A Protein TOLB; TOLB, PAL 96.6 0.22 7.6E-06 50.5 21.1 223 46-324 159-385 (415)
42 3v9f_A Two-component system se 96.6 0.2 6.7E-06 55.5 22.2 227 24-308 367-600 (781)
43 2ojh_A Uncharacterized protein 96.5 0.12 4E-06 48.4 17.7 191 44-284 20-214 (297)
44 3ow8_A WD repeat-containing pr 96.5 0.67 2.3E-05 44.9 23.9 218 32-313 93-313 (321)
45 2hqs_A Protein TOLB; TOLB, PAL 96.5 0.23 7.7E-06 50.4 20.5 204 30-284 189-395 (415)
46 2z2n_A Virginiamycin B lyase; 96.5 0.58 2E-05 43.9 25.8 221 24-309 61-284 (299)
47 3jrp_A Fusion protein of prote 96.5 0.23 7.8E-06 48.4 20.0 109 29-163 21-135 (379)
48 3nok_A Glutaminyl cyclase; bet 96.4 0.45 1.5E-05 45.2 20.4 151 30-224 64-215 (268)
49 1l0q_A Surface layer protein; 96.4 0.19 6.5E-06 49.7 19.1 213 32-312 45-266 (391)
50 1p22_A F-BOX/WD-repeat protein 96.3 1 3.6E-05 45.4 24.2 216 30-313 142-357 (435)
51 4a2l_A BT_4663, two-component 96.3 0.47 1.6E-05 52.5 23.1 230 24-308 361-603 (795)
52 1gxr_A ESG1, transducin-like e 96.3 0.62 2.1E-05 44.4 21.4 222 28-312 60-287 (337)
53 4ery_A WD repeat-containing pr 96.3 0.85 2.9E-05 43.4 26.1 194 30-279 76-271 (312)
54 3ow8_A WD repeat-containing pr 96.2 0.77 2.6E-05 44.4 22.0 178 86-313 91-271 (321)
55 3bws_A Protein LP49; two-domai 96.1 0.52 1.8E-05 47.2 20.9 206 29-282 179-396 (433)
56 1r5m_A SIR4-interacting protei 96.0 0.83 2.9E-05 45.0 21.6 220 29-312 118-352 (425)
57 2qc5_A Streptogramin B lactona 95.9 1.1 3.7E-05 42.0 24.5 219 24-308 66-289 (300)
58 2qc5_A Streptogramin B lactona 95.9 1.1 3.8E-05 41.9 24.1 220 23-308 23-247 (300)
59 2xbg_A YCF48-like protein; pho 95.9 1.4 4.9E-05 42.9 23.5 217 29-309 88-311 (327)
60 3zwl_B Eukaryotic translation 95.9 1.3 4.5E-05 42.6 22.0 110 29-163 42-152 (369)
61 2xbg_A YCF48-like protein; pho 95.9 1.4 4.9E-05 42.9 22.3 240 2-309 25-268 (327)
62 3jro_A Fusion protein of prote 95.9 0.11 3.6E-06 57.4 15.4 108 30-163 20-133 (753)
63 3g4e_A Regucalcin; six bladed 95.8 1 3.5E-05 43.0 20.5 233 20-311 13-263 (297)
64 3ott_A Two-component system se 95.8 0.84 2.9E-05 50.1 22.2 230 25-312 378-618 (758)
65 1r5m_A SIR4-interacting protei 95.8 0.38 1.3E-05 47.6 17.7 147 85-278 215-363 (425)
66 3zwl_B Eukaryotic translation 95.7 0.93 3.2E-05 43.7 20.0 238 30-312 85-337 (369)
67 3vgz_A Uncharacterized protein 95.6 1.8 6.1E-05 41.6 25.3 227 31-311 53-293 (353)
68 2ovr_B FBW7, F-BOX/WD repeat p 95.6 2.3 7.8E-05 42.8 23.9 211 33-312 171-382 (445)
69 1nir_A Nitrite reductase; hemo 95.5 0.61 2.1E-05 49.2 18.9 152 102-285 248-416 (543)
70 2ojh_A Uncharacterized protein 95.5 0.29 9.9E-06 45.6 14.9 210 29-283 51-265 (297)
71 3mkq_A Coatomer beta'-subunit; 95.4 0.88 3E-05 49.8 20.7 107 29-163 23-129 (814)
72 2xdw_A Prolyl endopeptidase; a 95.4 0.71 2.4E-05 50.2 19.6 217 28-283 133-376 (710)
73 1vyh_C Platelet-activating fac 95.4 1.5 5.2E-05 43.9 20.7 108 29-166 118-227 (410)
74 3dwl_C Actin-related protein 2 95.4 0.13 4.3E-06 50.8 12.3 110 30-164 22-133 (377)
75 3vgz_A Uncharacterized protein 95.3 2.1 7.2E-05 41.0 30.7 227 31-310 101-334 (353)
76 1pjx_A Dfpase, DIISOPROPYLFLUO 95.3 0.62 2.1E-05 44.3 16.8 132 23-168 21-167 (314)
77 2z3z_A Dipeptidyl aminopeptida 95.3 0.79 2.7E-05 49.5 19.5 194 46-278 235-437 (706)
78 1k8k_C P40, ARP2/3 complex 41 95.2 2.4 8.1E-05 40.9 24.9 109 29-161 62-172 (372)
79 4gga_A P55CDC, cell division c 95.2 1.3 4.5E-05 44.4 19.7 189 82-313 194-387 (420)
80 3fm0_A Protein CIAO1; WDR39,SG 95.2 1.6 5.6E-05 42.4 19.8 158 28-225 25-187 (345)
81 3hfq_A Uncharacterized protein 95.1 1.5 5.2E-05 42.3 19.3 103 47-167 19-123 (347)
82 2ovr_B FBW7, F-BOX/WD repeat p 95.1 3.2 0.00011 41.7 25.5 210 46-313 219-430 (445)
83 2xdw_A Prolyl endopeptidase; a 95.0 1.7 5.7E-05 47.3 21.1 211 43-284 95-331 (710)
84 1sq9_A Antiviral protein SKI8; 95.0 2.3 7.9E-05 41.6 20.4 112 32-167 82-221 (397)
85 3azo_A Aminopeptidase; POP fam 95.0 1.2 4.1E-05 47.6 19.6 198 45-284 160-377 (662)
86 2z3z_A Dipeptidyl aminopeptida 95.0 1.5 5.3E-05 47.2 20.6 194 102-325 235-434 (706)
87 4gqb_B Methylosome protein 50; 95.0 2.2 7.5E-05 41.8 20.0 177 86-313 138-323 (344)
88 1got_B GT-beta; complex (GTP-b 94.9 2.9 9.9E-05 40.4 24.7 177 86-313 154-335 (340)
89 4g56_B MGC81050 protein; prote 94.9 1.3 4.3E-05 43.6 18.1 178 86-313 150-335 (357)
90 1qhu_A Protein (hemopexin); be 94.9 1 3.4E-05 46.4 17.5 60 30-113 158-217 (460)
91 3jrp_A Fusion protein of prote 94.9 1 3.4E-05 43.7 17.2 201 31-285 69-297 (379)
92 1rwi_B Serine/threonine-protei 94.8 1.1 3.6E-05 41.6 16.5 190 24-275 71-263 (270)
93 3e5z_A Putative gluconolactona 94.8 1.2 4.1E-05 42.1 17.1 207 21-283 29-253 (296)
94 1qhu_A Protein (hemopexin); be 94.7 2.3 7.9E-05 43.7 19.6 110 22-163 99-216 (460)
95 2bkl_A Prolyl endopeptidase; m 94.7 1.6 5.6E-05 47.2 19.9 233 43-310 91-338 (695)
96 3c5m_A Oligogalacturonate lyas 94.7 0.46 1.6E-05 46.8 14.2 208 46-282 168-390 (396)
97 1pjx_A Dfpase, DIISOPROPYLFLUO 94.5 3.1 0.00011 39.2 19.5 201 24-277 75-300 (314)
98 3v7d_B Cell division control p 94.5 4.5 0.00016 40.7 26.6 177 85-312 278-454 (464)
99 2aq5_A Coronin-1A; WD40 repeat 94.5 2 6.8E-05 42.6 18.5 138 30-194 93-238 (402)
100 3u4y_A Uncharacterized protein 94.4 3.1 0.00011 39.6 19.3 193 32-283 53-259 (331)
101 2bkl_A Prolyl endopeptidase; m 94.3 1.4 4.9E-05 47.7 18.2 214 29-282 130-357 (695)
102 1vyh_C Platelet-activating fac 94.3 3.5 0.00012 41.2 20.0 68 86-167 203-270 (410)
103 3mkq_A Coatomer beta'-subunit; 94.3 7.2 0.00024 42.4 24.1 107 29-164 65-174 (814)
104 1ri6_A Putative isomerase YBHE 94.2 3.2 0.00011 39.4 18.9 104 31-161 5-114 (343)
105 3e5z_A Putative gluconolactona 94.2 3.6 0.00012 38.7 19.1 197 25-278 74-288 (296)
106 3hfq_A Uncharacterized protein 94.1 2.6 8.9E-05 40.6 18.2 121 28-168 48-178 (347)
107 1kb0_A Quinohemoprotein alcoho 94.1 7.5 0.00026 42.0 23.5 125 30-169 77-208 (677)
108 3vl1_A 26S proteasome regulato 94.1 4.9 0.00017 39.6 24.5 110 29-167 107-217 (420)
109 2ecf_A Dipeptidyl peptidase IV 94.1 2.1 7.1E-05 46.4 19.1 214 28-284 117-376 (741)
110 3no2_A Uncharacterized protein 94.0 4.1 0.00014 38.5 23.4 213 31-308 5-230 (276)
111 3v7d_B Cell division control p 94.0 5.6 0.00019 39.9 26.2 221 32-313 133-373 (464)
112 3iuj_A Prolyl endopeptidase; h 93.8 4 0.00014 44.2 20.7 211 29-283 138-366 (693)
113 2ecf_A Dipeptidyl peptidase IV 93.8 4 0.00014 44.1 20.8 129 24-169 41-188 (741)
114 1pgu_A Actin interacting prote 93.8 4.1 0.00014 42.4 20.3 233 30-313 77-320 (615)
115 1yr2_A Prolyl oligopeptidase; 93.8 1.8 6.1E-05 47.3 18.0 215 29-283 172-402 (741)
116 3ei3_B DNA damage-binding prot 93.8 2.5 8.7E-05 41.3 17.5 112 32-168 87-200 (383)
117 3ott_A Two-component system se 93.7 9.5 0.00032 41.6 23.7 196 25-284 68-268 (758)
118 1p22_A F-BOX/WD-repeat protein 93.6 3.3 0.00011 41.6 18.4 180 82-313 138-317 (435)
119 2ad6_A Methanol dehydrogenase 93.6 8.6 0.00029 40.6 22.1 125 30-169 62-194 (571)
120 2hes_X YDR267CP; beta-propelle 93.5 5.5 0.00019 38.3 19.1 71 86-169 118-191 (330)
121 3fvz_A Peptidyl-glycine alpha- 93.5 5.7 0.00019 38.2 29.0 249 25-311 29-312 (329)
122 3fm0_A Protein CIAO1; WDR39,SG 93.5 2.2 7.4E-05 41.5 16.2 186 86-313 27-217 (345)
123 3azo_A Aminopeptidase; POP fam 93.4 2.8 9.7E-05 44.6 18.4 238 45-324 101-367 (662)
124 4ggc_A P55CDC, cell division c 93.3 5.4 0.00018 37.3 18.6 55 243-313 251-307 (318)
125 2pbi_B Guanine nucleotide-bind 93.2 6.7 0.00023 38.1 22.1 177 86-312 165-348 (354)
126 2vdu_B TRNA (guanine-N(7)-)-me 93.0 7.5 0.00026 39.1 20.1 151 32-222 116-274 (450)
127 1pgu_A Actin interacting prote 93.0 7 0.00024 40.6 20.4 229 27-312 26-274 (615)
128 1got_B GT-beta; complex (GTP-b 93.0 6.8 0.00023 37.7 25.4 221 29-312 65-292 (340)
129 3scy_A Hypothetical bacterial 92.9 7.1 0.00024 37.7 24.3 114 32-163 14-130 (361)
130 4e54_B DNA damage-binding prot 92.9 0.93 3.2E-05 45.8 12.9 109 30-163 131-241 (435)
131 2pm7_B Protein transport prote 92.8 4.9 0.00017 37.9 17.4 109 29-163 19-133 (297)
132 1sq9_A Antiviral protein SKI8; 92.8 7.5 0.00026 37.8 22.0 110 24-162 20-157 (397)
133 1qks_A Cytochrome CD1 nitrite 92.8 5.7 0.0002 42.0 19.2 163 87-285 256-435 (567)
134 2dg1_A DRP35, lactonase; beta 92.7 7.1 0.00024 37.2 22.5 128 24-169 49-178 (333)
135 2pm9_A Protein WEB1, protein t 92.6 6 0.0002 38.8 18.3 230 29-313 77-329 (416)
136 4g56_B MGC81050 protein; prote 92.6 1.2 4E-05 43.8 12.8 124 28-168 51-176 (357)
137 4a11_B DNA excision repair pro 92.5 5.9 0.0002 38.5 18.0 106 30-163 111-219 (408)
138 3pe7_A Oligogalacturonate lyas 92.5 0.77 2.6E-05 45.1 11.4 110 46-169 168-280 (388)
139 1nir_A Nitrite reductase; hemo 92.4 5.5 0.00019 41.8 18.5 107 30-168 148-263 (543)
140 4aez_A CDC20, WD repeat-contai 92.3 9.4 0.00032 37.6 21.1 181 46-280 113-297 (401)
141 3jro_A Fusion protein of prote 92.3 1.1 3.8E-05 49.2 13.3 96 86-197 20-122 (753)
142 1jmx_B Amine dehydrogenase; ox 92.2 3.5 0.00012 39.3 15.6 115 31-164 11-136 (349)
143 4aow_A Guanine nucleotide-bind 92.2 7.9 0.00027 36.5 21.0 137 29-197 96-236 (340)
144 3dwl_C Actin-related protein 2 92.2 1 3.5E-05 44.0 11.8 70 86-168 22-93 (377)
145 1q7f_A NHL, brain tumor CG1071 92.2 7.4 0.00025 36.1 23.0 182 86-310 40-226 (286)
146 4gqb_B Methylosome protein 50; 92.0 6.6 0.00023 38.3 17.5 109 29-164 137-248 (344)
147 2dg1_A DRP35, lactonase; beta 92.0 3.2 0.00011 39.7 14.9 156 86-276 55-213 (333)
148 2ynn_A Coatomer subunit beta'; 91.9 8.6 0.00029 36.3 21.9 107 29-163 23-129 (304)
149 1ri6_A Putative isomerase YBHE 91.7 8.9 0.00031 36.1 20.2 100 46-167 60-166 (343)
150 3odt_A Protein DOA1; ubiquitin 91.7 8.3 0.00029 35.8 17.3 148 86-282 154-302 (313)
151 3mmy_A MRNA export factor; mRN 91.6 9.6 0.00033 36.2 19.4 105 31-163 54-161 (368)
152 1kb0_A Quinohemoprotein alcoho 91.5 14 0.00048 39.9 20.8 125 82-226 73-208 (677)
153 2aq5_A Coronin-1A; WD40 repeat 91.4 12 0.00039 36.9 19.6 156 86-277 93-255 (402)
154 3sfz_A APAF-1, apoptotic pepti 91.4 13 0.00043 42.9 21.6 112 29-168 625-738 (1249)
155 2vdu_B TRNA (guanine-N(7)-)-me 91.2 13 0.00046 37.2 20.6 67 87-167 210-276 (450)
156 3g4e_A Regucalcin; six bladed 91.2 7.1 0.00024 36.9 16.3 176 46-254 73-263 (297)
157 3u4y_A Uncharacterized protein 91.1 8.6 0.00029 36.3 17.0 133 86-252 9-147 (331)
158 1yr2_A Prolyl oligopeptidase; 91.0 10 0.00035 41.2 19.3 207 43-284 130-360 (741)
159 2ghs_A AGR_C_1268P; regucalcin 91.0 11 0.00039 36.1 22.8 113 31-169 61-175 (326)
160 2pm9_A Protein WEB1, protein t 91.0 6.1 0.00021 38.7 16.2 112 33-164 27-147 (416)
161 3ei3_B DNA damage-binding prot 90.9 12 0.00042 36.2 19.2 144 88-276 87-236 (383)
162 1erj_A Transcriptional repress 90.9 13 0.00045 36.5 23.4 109 28-166 132-242 (393)
163 3dr2_A Exported gluconolactona 90.8 6 0.00021 37.5 15.4 167 28-226 94-274 (305)
164 3dr2_A Exported gluconolactona 90.6 12 0.0004 35.4 18.0 210 24-284 49-275 (305)
165 2fp8_A Strictosidine synthase; 90.5 12 0.00042 35.6 19.7 210 24-276 84-313 (322)
166 1itv_A MMP9; adaptive molecula 90.1 6.6 0.00023 35.2 13.9 150 80-278 10-176 (195)
167 4a11_B DNA excision repair pro 90.0 8.4 0.00029 37.4 16.1 68 88-165 200-279 (408)
168 4e54_B DNA damage-binding prot 90.0 2.2 7.6E-05 43.0 12.0 98 86-197 131-230 (435)
169 3sfz_A APAF-1, apoptotic pepti 89.9 6.7 0.00023 45.3 17.4 70 86-169 972-1041(1249)
170 3bg1_A Protein SEC13 homolog; 89.7 12 0.0004 35.6 16.5 114 29-168 23-143 (316)
171 3pe7_A Oligogalacturonate lyas 89.6 7.1 0.00024 38.0 15.2 216 29-284 45-281 (388)
172 3no2_A Uncharacterized protein 89.6 14 0.00047 34.7 17.5 173 86-311 4-185 (276)
173 2pbi_B Guanine nucleotide-bind 89.5 16 0.00054 35.4 21.0 93 87-196 210-304 (354)
174 3i2n_A WD repeat-containing pr 89.2 7 0.00024 37.2 14.6 107 32-164 32-150 (357)
175 3c5m_A Oligogalacturonate lyas 89.2 4.1 0.00014 39.7 13.1 108 46-169 216-336 (396)
176 1xfd_A DIP, dipeptidyl aminope 89.1 11 0.00039 40.3 17.6 80 27-119 68-151 (723)
177 2xyi_A Probable histone-bindin 89.1 15 0.00053 36.5 17.6 63 89-163 196-264 (430)
178 3b7f_A Glycosyl hydrolase, BNR 88.7 20 0.00067 35.4 22.0 215 48-308 33-297 (394)
179 2gop_A Trilobed protease; beta 88.6 17 0.00058 34.5 16.9 196 44-284 41-259 (347)
180 1itv_A MMP9; adaptive molecula 88.6 13 0.00045 33.2 15.2 142 24-195 11-164 (195)
181 1qks_A Cytochrome CD1 nitrite 88.4 28 0.00094 36.7 20.9 104 31-167 167-280 (567)
182 2gop_A Trilobed protease; beta 88.1 18 0.00062 34.3 21.1 58 102-169 152-214 (347)
183 4gga_A P55CDC, cell division c 87.3 24 0.00082 34.8 19.6 95 46-164 125-220 (420)
184 3scy_A Hypothetical bacterial 87.2 15 0.0005 35.4 15.6 119 86-226 221-346 (361)
185 1w6s_A Methanol dehydrogenase 87.2 33 0.0011 36.3 20.0 125 30-169 62-200 (599)
186 1yfq_A Cell cycle arrest prote 87.1 20 0.00068 33.7 20.4 104 29-162 21-131 (342)
187 1yfq_A Cell cycle arrest prote 86.9 20 0.0007 33.6 16.7 69 86-169 22-96 (342)
188 3lrv_A PRE-mRNA-splicing facto 86.9 22 0.00075 33.9 20.8 192 30-277 47-245 (343)
189 1jmx_B Amine dehydrogenase; ox 86.9 4.5 0.00015 38.5 11.4 70 86-168 10-80 (349)
190 3dm0_A Maltose-binding peripla 86.8 36 0.0012 36.3 23.7 192 29-280 440-636 (694)
191 2p4o_A Hypothetical protein; p 86.4 22 0.00076 33.5 23.7 117 19-163 31-148 (306)
192 1pex_A Collagenase-3, MMP-13; 86.3 19 0.00064 32.6 15.9 154 80-281 27-197 (207)
193 1erj_A Transcriptional repress 86.2 27 0.00091 34.2 17.3 143 133-313 130-279 (393)
194 2fp8_A Strictosidine synthase; 86.2 23 0.0008 33.5 20.6 232 46-309 40-301 (322)
195 3ju4_A Endo-N-acetylneuraminid 86.1 30 0.001 34.6 21.6 215 48-275 260-513 (670)
196 3hxj_A Pyrrolo-quinoline quino 85.8 23 0.0008 33.2 16.5 101 30-168 107-211 (330)
197 3i2n_A WD repeat-containing pr 85.8 19 0.00066 33.9 15.4 181 88-313 32-235 (357)
198 1yiq_A Quinohemoprotein alcoho 85.7 23 0.0008 38.2 17.5 124 83-226 67-201 (689)
199 3k26_A Polycomb protein EED; W 85.7 24 0.00083 33.3 21.2 107 31-164 85-194 (366)
200 2hes_X YDR267CP; beta-propelle 85.7 25 0.00085 33.4 19.2 155 33-226 26-191 (330)
201 3iuj_A Prolyl endopeptidase; h 85.6 42 0.0014 36.0 21.6 148 102-285 259-414 (693)
202 3fvz_A Peptidyl-glycine alpha- 85.2 27 0.00091 33.3 25.9 167 81-276 147-322 (329)
203 3dm0_A Maltose-binding peripla 85.1 43 0.0015 35.7 21.6 149 86-278 441-594 (694)
204 3o4h_A Acylamino-acid-releasin 85.0 18 0.00062 37.6 15.9 111 85-223 120-231 (582)
205 2pm7_B Protein transport prote 85.0 25 0.00085 32.8 17.5 64 31-112 67-133 (297)
206 3vl1_A 26S proteasome regulato 84.9 30 0.001 33.7 25.2 189 30-276 150-365 (420)
207 4aow_A Guanine nucleotide-bind 84.3 27 0.00092 32.7 22.1 148 86-279 97-249 (340)
208 3odt_A Protein DOA1; ubiquitin 83.8 27 0.00091 32.2 21.8 42 267-313 246-288 (313)
209 3lrv_A PRE-mRNA-splicing facto 81.9 36 0.0012 32.3 22.8 68 86-166 138-205 (343)
210 1pby_B Quinohemoprotein amine 81.7 33 0.0011 31.9 15.0 157 89-281 3-168 (337)
211 3o4h_A Acylamino-acid-releasin 81.7 18 0.00061 37.7 14.2 155 87-280 75-231 (582)
212 2ghs_A AGR_C_1268P; regucalcin 81.5 38 0.0013 32.3 15.5 65 87-169 61-125 (326)
213 3b7f_A Glycosyl hydrolase, BNR 80.6 46 0.0016 32.7 20.1 195 23-251 58-297 (394)
214 3hxj_A Pyrrolo-quinoline quino 80.4 20 0.00067 33.7 12.9 86 85-194 106-194 (330)
215 2xyi_A Probable histone-bindin 79.9 29 0.001 34.4 14.5 64 87-162 141-213 (430)
216 3hrp_A Uncharacterized protein 79.8 51 0.0017 32.7 27.2 209 24-284 135-362 (409)
217 1pby_B Quinohemoprotein amine 79.7 39 0.0013 31.4 15.2 55 45-118 114-170 (337)
218 1pex_A Collagenase-3, MMP-13; 78.9 37 0.0013 30.6 15.4 157 24-224 28-197 (207)
219 1kv9_A Type II quinohemoprotei 78.6 75 0.0025 34.0 24.5 124 30-169 66-196 (668)
220 3k26_A Polycomb protein EED; W 78.5 45 0.0015 31.3 15.6 141 103-277 45-193 (366)
221 2ad6_A Methanol dehydrogenase 77.6 73 0.0025 33.3 25.8 75 210-307 444-523 (571)
222 2ymu_A WD-40 repeat protein; u 77.6 66 0.0023 32.8 21.1 173 86-312 355-530 (577)
223 3oyo_A Hemopexin fold protein 77.3 17 0.00059 33.2 10.7 97 85-195 69-188 (225)
224 3gre_A Serine/threonine-protei 77.2 57 0.002 31.9 19.7 69 136-224 180-250 (437)
225 1k32_A Tricorn protease; prote 76.7 97 0.0033 34.9 19.2 104 46-169 358-468 (1045)
226 3c7x_A Matrix metalloproteinas 76.7 23 0.0008 31.5 11.2 114 23-164 54-177 (196)
227 1gen_A Gelatinase A; hydrolase 76.0 33 0.0011 31.1 12.2 146 23-195 34-192 (218)
228 3f3f_A Nucleoporin SEH1; struc 75.6 50 0.0017 30.4 21.7 111 29-164 21-145 (351)
229 3c7x_A Matrix metalloproteinas 74.8 44 0.0015 29.7 12.5 113 24-164 10-129 (196)
230 3bg1_A Protein SEC13 homolog; 74.4 39 0.0013 31.8 13.0 71 86-169 24-97 (316)
231 4d9s_A UVB-resistance protein 74.3 72 0.0024 31.6 27.7 18 128-145 182-199 (406)
232 3iz6_a 40S ribosomal protein R 72.8 71 0.0024 30.9 19.7 176 103-313 181-367 (380)
233 1su3_A Interstitial collagenas 72.6 45 0.0015 34.0 13.4 155 81-282 267-438 (450)
234 2p9w_A MAL S 1 allergenic prot 72.0 75 0.0026 30.9 21.0 228 46-311 35-305 (334)
235 1w6s_A Methanol dehydrogenase 71.4 1.1E+02 0.0037 32.4 19.4 126 82-226 58-200 (599)
236 1gen_A Gelatinase A; hydrolase 70.7 61 0.0021 29.3 15.5 66 79-160 33-103 (218)
237 2ymu_A WD-40 repeat protein; u 70.7 96 0.0033 31.5 22.3 174 86-312 314-489 (577)
238 1k32_A Tricorn protease; prote 70.6 47 0.0016 37.5 14.5 162 29-226 306-468 (1045)
239 3gre_A Serine/threonine-protei 70.6 83 0.0028 30.7 19.2 70 86-167 181-250 (437)
240 3mvd_K Regulator of chromosome 69.6 92 0.0031 30.9 20.4 17 22-38 137-153 (423)
241 4d9s_A UVB-resistance protein 69.5 91 0.0031 30.8 23.2 19 21-39 130-148 (406)
242 1yiq_A Quinohemoprotein alcoho 69.3 1.3E+02 0.0043 32.3 26.6 126 29-168 69-200 (689)
243 1hxn_A Hemopexin, HPX; heme, b 69.3 35 0.0012 31.0 10.6 113 24-162 22-144 (219)
244 1su3_A Interstitial collagenas 67.6 53 0.0018 33.4 12.7 157 24-224 267-437 (450)
245 3ba0_A Macrophage metalloelast 67.0 59 0.002 32.0 12.6 153 81-281 185-355 (365)
246 2ynn_A Coatomer subunit beta'; 65.9 85 0.0029 29.1 23.4 106 29-163 65-173 (304)
247 1npe_A Nidogen, entactin; glyc 65.1 81 0.0028 28.6 26.1 199 23-281 39-243 (267)
248 3oyo_A Hemopexin fold protein 64.4 32 0.0011 31.4 9.3 117 24-162 64-198 (225)
249 1hxn_A Hemopexin, HPX; heme, b 63.9 65 0.0022 29.2 11.3 61 85-162 27-90 (219)
250 3frx_A Guanine nucleotide-bind 63.3 98 0.0034 28.9 18.2 68 86-167 76-143 (319)
251 1kv9_A Type II quinohemoprotei 63.0 80 0.0027 33.7 13.7 122 133-282 63-195 (668)
252 2p9w_A MAL S 1 allergenic prot 62.0 61 0.0021 31.5 11.2 143 86-254 147-305 (334)
253 3of7_A Regulator of chromosome 61.6 1E+02 0.0036 31.1 13.8 18 128-145 266-283 (473)
254 1a12_A RCC1, regulator of chro 60.3 1.3E+02 0.0046 29.5 19.9 18 21-38 120-137 (413)
255 3iz6_a 40S ribosomal protein R 59.9 1.2E+02 0.0043 29.0 21.7 101 46-168 180-286 (380)
256 3of7_A Regulator of chromosome 59.4 1.5E+02 0.0052 29.9 19.2 19 21-39 76-94 (473)
257 3mmy_A MRNA export factor; mRN 59.2 1.1E+02 0.0039 28.3 18.3 94 87-197 54-150 (368)
258 2xe4_A Oligopeptidase B; hydro 58.5 2E+02 0.0069 31.0 17.6 201 30-274 185-398 (751)
259 1nr0_A Actin interacting prote 57.3 1.8E+02 0.0063 30.1 23.2 157 86-282 201-361 (611)
260 1xfd_A DIP, dipeptidyl aminope 57.2 1.4E+02 0.0049 31.4 14.6 109 47-169 38-150 (723)
261 4a5s_A Dipeptidyl peptidase 4 56.7 1.7E+02 0.0059 31.2 15.2 18 267-284 344-361 (740)
262 3qhy_B Beta-lactamase inhibito 54.4 72 0.0025 29.9 10.3 94 79-196 151-245 (282)
263 3lp9_A LS-24; SEED albumin, pl 52.9 28 0.00095 31.9 6.8 62 86-163 129-202 (227)
264 1ck7_A Protein (gelatinase A); 52.5 92 0.0032 33.1 11.5 114 25-164 448-568 (631)
265 2p4o_A Hypothetical protein; p 50.3 1.6E+02 0.0054 27.3 19.8 116 24-162 76-198 (306)
266 2xe4_A Oligopeptidase B; hydro 50.2 2.7E+02 0.0092 29.9 16.1 164 86-281 185-360 (751)
267 1flg_A Protein (quinoprotein e 49.4 1.2E+02 0.004 31.8 12.0 121 29-168 67-201 (582)
268 1npe_A Nidogen, entactin; glyc 49.3 1.5E+02 0.0051 26.7 22.4 181 80-309 39-226 (267)
269 3kci_A Probable E3 ubiquitin-p 49.3 2E+02 0.0067 28.1 22.6 60 79-145 117-185 (389)
270 3frx_A Guanine nucleotide-bind 48.1 1.7E+02 0.0059 27.1 23.8 108 29-166 75-189 (319)
271 1n7d_A LDL receptor, low-densi 46.0 3E+02 0.01 29.3 17.3 206 46-309 386-602 (699)
272 4h5i_A Guanine nucleotide-exch 44.5 2.2E+02 0.0074 27.2 17.2 163 24-220 181-344 (365)
273 3kci_A Probable E3 ubiquitin-p 44.1 2.3E+02 0.008 27.5 23.3 17 22-38 117-133 (389)
274 3f3f_A Nucleoporin SEH1; struc 43.3 1.9E+02 0.0065 26.2 20.0 65 86-163 22-91 (351)
275 2xzm_R RACK1; ribosome, transl 43.2 2.1E+02 0.0072 26.7 20.0 63 30-112 87-150 (343)
276 3hrp_A Uncharacterized protein 42.5 2.5E+02 0.0087 27.5 17.7 151 86-277 141-299 (409)
277 1a12_A RCC1, regulator of chro 40.4 2.7E+02 0.0093 27.2 24.3 102 21-146 68-191 (413)
278 1ck7_A Protein (gelatinase A); 40.1 1.3E+02 0.0043 32.1 10.2 66 80-160 447-516 (631)
279 2mad_H Methylamine dehydrogena 39.8 2.7E+02 0.0092 26.9 15.8 73 86-168 278-356 (373)
280 3mvd_K Regulator of chromosome 39.6 2.8E+02 0.0097 27.1 16.1 18 21-38 188-205 (423)
281 1z68_A Fibroblast activation p 39.6 3.2E+02 0.011 28.7 13.8 66 103-169 225-298 (719)
282 3ju4_A Endo-N-acetylneuraminid 39.4 3.1E+02 0.01 27.5 20.8 189 110-311 268-482 (670)
283 4ggc_A P55CDC, cell division c 37.7 2.3E+02 0.0078 25.5 20.1 59 46-117 45-104 (318)
284 3k6s_A Integrin alpha-X; cell 36.9 2.7E+02 0.0093 31.7 13.0 159 21-186 335-509 (1095)
285 2cn3_A Xyloglucanase, beta-1,4 35.3 4.4E+02 0.015 28.2 28.6 87 218-310 230-322 (737)
286 3qhy_B Beta-lactamase inhibito 34.4 2.8E+02 0.0097 25.6 21.5 171 22-255 34-208 (282)
287 4hvt_A Ritya.17583.B, post-pro 34.2 2.8E+02 0.0095 29.8 12.1 102 46-166 269-385 (711)
288 3tc9_A Hypothetical hydrolase; 32.9 3.7E+02 0.013 26.5 13.5 110 30-168 149-263 (430)
289 1flg_A Protein (quinoprotein e 32.4 2.6E+02 0.0088 29.1 11.3 77 45-143 465-545 (582)
290 3dw8_B Serine/threonine-protei 32.2 3.4E+02 0.012 25.9 16.7 25 28-57 37-61 (447)
291 1n7d_A LDL receptor, low-densi 31.8 4.9E+02 0.017 27.6 16.1 151 85-279 463-617 (699)
292 1z68_A Fibroblast activation p 31.1 4.4E+02 0.015 27.5 13.2 78 86-169 263-353 (719)
293 3ba0_A Macrophage metalloelast 30.9 3.3E+02 0.011 26.5 11.1 79 21-117 274-356 (365)
294 1fwx_A Nitrous oxide reductase 29.7 3.5E+02 0.012 28.4 11.4 55 101-163 253-309 (595)
295 2xzm_R RACK1; ribosome, transl 28.5 3.6E+02 0.012 25.0 21.1 64 86-163 87-150 (343)
296 3vu4_A KMHSV2; beta-propeller 27.6 3.9E+02 0.013 25.1 23.0 23 31-58 71-93 (355)
297 3k6s_A Integrin alpha-X; cell 27.2 7.3E+02 0.025 28.1 15.2 186 79-279 336-545 (1095)
298 4hvt_A Ritya.17583.B, post-pro 26.9 4.4E+02 0.015 28.3 12.0 151 101-285 268-438 (711)
299 2cn3_A Xyloglucanase, beta-1,4 26.5 2.8E+02 0.0097 29.7 10.6 79 112-196 232-322 (737)
300 1ijq_A LDL receptor, low-densi 26.3 4E+02 0.014 24.8 26.9 206 46-309 10-226 (316)
301 3v65_B Low-density lipoprotein 24.4 4.8E+02 0.017 25.1 25.4 203 46-308 96-305 (386)
302 1nr0_A Actin interacting prote 23.8 6E+02 0.02 26.0 19.0 66 86-165 250-316 (611)
303 3hx6_A Type 4 fimbrial biogene 23.6 6.4E+02 0.022 26.2 14.0 76 32-114 152-235 (570)
304 2oiz_A Aromatic amine dehydrog 22.5 3.1E+02 0.011 26.1 9.2 65 86-163 265-335 (361)
305 1sqj_A OXG-RCBH, oligoxylogluc 20.8 8.1E+02 0.028 26.4 27.7 207 47-285 38-278 (789)
306 2hz6_A Endoplasmic reticulum t 20.8 91 0.0031 30.2 4.8 69 23-115 2-74 (369)
307 4hw6_A Hypothetical protein, I 20.5 6.2E+02 0.021 24.9 11.8 133 30-194 152-291 (433)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.9e-47 Score=381.75 Aligned_cols=290 Identities=19% Similarity=0.255 Sum_probs=248.2
Q ss_pred CCCCCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEc
Q 010034 14 GTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFG 93 (519)
Q Consensus 14 g~~P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~G 93 (519)
++.|.+|.+|+++.++ +.||+|||. ....++++++||+.+++|+.++ ++|.+|.+|++++++++||++|
T Consensus 9 ~~~~~~~~~~~~~~~~-~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~G 77 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVG-RLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLA---------DLQVPRSGLAGCVVGGLLYAVG 77 (308)
T ss_dssp ------------CCCC-CCEEEECCB-SSSBCCCEEEEETTTTEEEECC---------CCSSCCBSCEEEEETTEEEEEC
T ss_pred ccCCeeeCCccccCCC-CEEEEEeCc-CCCCcceEEEEcCCCCeEeECC---------CCCcccccceEEEECCEEEEEC
Confidence 4678899999999988 699999998 5678899999999999999985 5789999999999999999999
Q ss_pred cc----cCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEec
Q 010034 94 GR----FGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 94 G~----~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~ 169 (519)
|. .+...++++++||+.+++|++++ ++|.+|..|+++++++ +||++||.++....+++++||+.+++|+.++
T Consensus 78 G~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 153 (308)
T 1zgk_A 78 GRNNSPDGNTDSSALDCYNPMTNQWSPCA---PMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNSVERYEPERDEWHLVA 153 (308)
T ss_dssp CEEEETTEEEECCCEEEEETTTTEEEECC---CCSSCCBTCEEEEETT-EEEEECCEETTEECCCEEEEETTTTEEEECC
T ss_pred CCcCCCCCCeecceEEEECCCCCeEeECC---CCCcCccccEEEEECC-EEEEEcCCCCCcccccEEEECCCCCeEeECC
Confidence 98 55567899999999999999998 6999999999999965 9999999988778899999999999999998
Q ss_pred cCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEE
Q 010034 170 VTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLL 249 (519)
Q Consensus 170 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv 249 (519)
++|.+|.+|+++.++++|||+||..... .++.+++||+.+++|+.++ ++|.+|.+|++++.+++|||
T Consensus 154 ---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv 220 (308)
T 1zgk_A 154 ---PMLTRRIGVGVAVLNRLLYAVGGFDGTN-------RLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYA 220 (308)
T ss_dssp ---CCSSCCBSCEEEEETTEEEEECCBCSSC-------BCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEE
T ss_pred ---CCCccccceEEEEECCEEEEEeCCCCCC-------cCceEEEEeCCCCeEeeCC---CCCCccccceEEEECCEEEE
Confidence 8999999999999999999999987654 2577889999999999998 78999999999999999999
Q ss_pred EeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCCCCccceEEecCCCccc
Q 010034 250 FGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPI 329 (519)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~~~~~D~w~l~~~~d~~ 329 (519)
+||..... ..+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++|.| |+.
T Consensus 221 ~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~y----d~~ 286 (308)
T 1zgk_A 221 AGGYDGQD-------QLNSVERYDVETETWTFVAP---MKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECY----DPD 286 (308)
T ss_dssp ECCBCSSS-------BCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEE----ETT
T ss_pred EeCCCCCC-------ccceEEEEeCCCCcEEECCC---CCCCccceEEEEECCEEEEEcCcCCCcccceEEEE----cCC
Confidence 99987543 57999999999999999986 46799999999999999999999887778887754 556
Q ss_pred ccccccCCCCCCCCCC
Q 010034 330 AKRYTESPPKVLPENK 345 (519)
Q Consensus 330 ~~~w~~~~~~~~p~~~ 345 (519)
+++|+..++++.++..
T Consensus 287 ~~~W~~~~~~p~~r~~ 302 (308)
T 1zgk_A 287 TDTWSEVTRMTSGRSG 302 (308)
T ss_dssp TTEEEEEEECSSCCBS
T ss_pred CCEEeecCCCCCCccc
Confidence 7788888777766544
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.4e-45 Score=365.20 Aligned_cols=274 Identities=21% Similarity=0.315 Sum_probs=242.3
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECC
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~ 110 (519)
+.||++||.+. ..++++++||+.+++|..++ ++|.+|.+|++++++++||++||..+...++++++||+.
T Consensus 16 ~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~ 85 (302)
T 2xn4_A 16 KLMVVVGGQAP-KAIRSVECYDFKEERWHQVA---------ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPV 85 (302)
T ss_dssp EEEEEECCBSS-SBCCCEEEEETTTTEEEEEC---------CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETT
T ss_pred CEEEEECCCCC-CCCCcEEEEcCcCCcEeEcc---------cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCC
Confidence 79999999864 46789999999999999985 578899999999999999999999887788999999999
Q ss_pred CCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCEE
Q 010034 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRL 190 (519)
Q Consensus 111 t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~l 190 (519)
+++|++++ ++|.+|..|+++++++ +||++||.++....+++++||+.+++|+.++ ++|.+|.+|+++.++++|
T Consensus 86 ~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i 158 (302)
T 2xn4_A 86 KDQWTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGLL 158 (302)
T ss_dssp TTEEEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEE
T ss_pred CCceeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCCeEeecC---CCCCcccCceEEEECCEE
Confidence 99999998 6999999999999965 9999999988778899999999999999998 899999999999999999
Q ss_pred EEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEE
Q 010034 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (519)
Q Consensus 191 yv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~ 270 (519)
||+||...... ..++.+++||+.+++|+.+. ++|.+|.+|++++.+++||++||..... ..++++
T Consensus 159 yv~GG~~~~~~-----~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~ 223 (302)
T 2xn4_A 159 YAVGGYDVASR-----QCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGPL-------VRKSVE 223 (302)
T ss_dssp EEECCEETTTT-----EECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSSS-------BCCCEE
T ss_pred EEEeCCCCCCC-----ccccEEEEEeCCCCcEEECC---CCccccccccEEEECCEEEEECCCCCCc-------ccceEE
Confidence 99999866431 13577888999999999997 7899999999999999999999987543 678999
Q ss_pred EEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCCCCccceEEecCCCcccccccccCC-CCCCCC
Q 010034 271 ILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESP-PKVLPE 343 (519)
Q Consensus 271 ~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~~~~~D~w~l~~~~d~~~~~w~~~~-~~~~p~ 343 (519)
+||+.+++|+.++.+ |.+|..|+++.++++|||+||.++...++++|. ||+.+++|+..+ +++.++
T Consensus 224 ~yd~~~~~W~~~~~~---~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~----yd~~~~~W~~~~~~~~~~r 290 (302)
T 2xn4_A 224 VYDPTTNAWRQVADM---NMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEY----YNPTTDKWTVVSSCMSTGR 290 (302)
T ss_dssp EEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSSBCCCEEE----EETTTTEEEECSSCCSSCC
T ss_pred EEeCCCCCEeeCCCC---CCccccCeEEEECCEEEEECCcCCCcccccEEE----EcCCCCeEEECCcccCccc
Confidence 999999999999864 568999999999999999999988777888665 566678898875 455444
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.3e-45 Score=365.11 Aligned_cols=275 Identities=19% Similarity=0.221 Sum_probs=242.4
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECC
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~ 110 (519)
+.||+|||... ++++++||+.+++|..++ ++|.+|.+|++++++++|||+||.. ...++++++||+.
T Consensus 12 ~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~ 78 (306)
T 3ii7_A 12 DYRIALFGGSQ---PQSCRYFNPKDYSWTDIR---------CPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVV 78 (306)
T ss_dssp CEEEEEECCSS---TTSEEEEETTTTEEEECC---------CCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETT
T ss_pred ceEEEEeCCCC---CceEEEecCCCCCEecCC---------CCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCC
Confidence 68999999765 799999999999999985 5789999999999999999999998 6778999999999
Q ss_pred CCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCC-CCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCE
Q 010034 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKR 189 (519)
Q Consensus 111 t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~ 189 (519)
+++|+.++ ++|.+|..|+++++++ +|||+||.+ +....+++++||+.+++|++++ ++|.+|..|+++.++++
T Consensus 79 ~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~ 151 (306)
T 3ii7_A 79 KDSWYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGL 151 (306)
T ss_dssp TTEEEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE
T ss_pred CCeEEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCE
Confidence 99999998 6999999999999965 999999997 6677899999999999999998 89999999999999999
Q ss_pred EEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcE
Q 010034 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (519)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v 269 (519)
|||+||....... ...++.+++||+.+++|+.++ ++|.+|.+|++++.+++||++||.... ...+++
T Consensus 152 iyv~GG~~~~~~~---~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~~ 218 (306)
T 3ii7_A 152 IYVCGGSLGNNVS---GRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGL-------GGLDNV 218 (306)
T ss_dssp EEEECCEESCTTT---CEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETT-------EEBCCE
T ss_pred EEEECCCCCCCCc---ccccceEEEeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCC-------CCCceE
Confidence 9999998765421 012577889999999999998 789999999999999999999998654 367999
Q ss_pred EEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCCCCccceEEecCCCcccccccccCCCCCCCCCC
Q 010034 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESPPKVLPENK 345 (519)
Q Consensus 270 ~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~~~~~D~w~l~~~~d~~~~~w~~~~~~~~p~~~ 345 (519)
++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++|. ||+.+++|...++++.++..
T Consensus 219 ~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~----yd~~~~~W~~~~~~~~~r~~ 287 (306)
T 3ii7_A 219 EYYDIKLNEWKMVSP---MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILE----YNTETDKWVANSKVRAFPVT 287 (306)
T ss_dssp EEEETTTTEEEECCC---CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEE----EETTTTEEEEEEEEECCSCT
T ss_pred EEeeCCCCcEEECCC---CCCCccceeEEEECCEEEEEeCcCCCeeeeeEEE----EcCCCCeEEeCCCcccccce
Confidence 999999999999986 4669999999999999999999988778888775 55667889888766665544
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.4e-45 Score=362.34 Aligned_cols=274 Identities=20% Similarity=0.331 Sum_probs=243.8
Q ss_pred CcEEEEEcC-cCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEE
Q 010034 30 KSKVVVFGG-LVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 30 ~~~lyv~GG-~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
++.||+||| ......++++++||+.+++|..++ ++|.+|.+|+++.++++||++||..+....+++++||
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d 84 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP---------SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLD 84 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECC---------CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCC---------CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEE
Confidence 379999999 666788999999999999999985 4688999999999999999999998877889999999
Q ss_pred CCCCe---EEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEE
Q 010034 109 TDIWQ---WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (519)
Q Consensus 109 ~~t~~---W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~ 185 (519)
+.+++ |+.++ ++|.+|..|+++++++ +||++||.++....+++++||+.+++|+.++ ++|.+|.+|+++.
T Consensus 85 ~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~ 157 (301)
T 2vpj_A 85 YTADEDGVWYSVA---PMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNIDQWSMLG---DMQTAREGAGLVV 157 (301)
T ss_dssp TTCCTTCCCEEEC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTTEEEEEE---ECSSCCBSCEEEE
T ss_pred CCCCCCCeeEECC---CCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCCeEEECC---CCCCCcccceEEE
Confidence 99999 99997 6999999999999965 9999999988778899999999999999998 8999999999999
Q ss_pred eCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccce
Q 010034 186 VEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (519)
Q Consensus 186 ~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~ 265 (519)
++++||++||..... .++.+++||+.+++|+.++ ++|.+|..|++++.+++||++||..... .
T Consensus 158 ~~~~iyv~GG~~~~~-------~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~ 220 (301)
T 2vpj_A 158 ASGVIYCLGGYDGLN-------ILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTA-------H 220 (301)
T ss_dssp ETTEEEEECCBCSSC-------BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------B
T ss_pred ECCEEEEECCCCCCc-------ccceEEEEeCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCc-------c
Confidence 999999999987653 3578889999999999997 7899999999999999999999987643 5
Q ss_pred eCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCCCCccceEEecCCCcccccccccCCCCCCCC
Q 010034 266 YNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESPPKVLPE 343 (519)
Q Consensus 266 ~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~~~~~D~w~l~~~~d~~~~~w~~~~~~~~p~ 343 (519)
.+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++|. ||+.+++|+..++++.++
T Consensus 221 ~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~----yd~~~~~W~~~~~~~~~r 291 (301)
T 2vpj_A 221 LSSVEAYNIRTDSWTTVTS---MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIEC----YDPIIDSWEVVTSMGTQR 291 (301)
T ss_dssp CCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEE----EETTTTEEEEEEEEEEEE
T ss_pred cceEEEEeCCCCcEEECCC---CCCcccceeEEEECCEEEEEcCcCCCcccccEEE----EcCCCCeEEEcCCCCccc
Confidence 7899999999999999986 4669999999999999999999988777778665 455677888776555444
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=350.28 Aligned_cols=261 Identities=18% Similarity=0.297 Sum_probs=233.2
Q ss_pred ceeEEceeCCCCCCCCCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeE
Q 010034 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~ 81 (519)
.+|+++. ++|.+|.+|+++.++ +.||++||..+...++++++||+.+++|+.++ ++|.+|..|+
T Consensus 40 ~~W~~~~------~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~ 103 (302)
T 2xn4_A 40 ERWHQVA------ELPSRRCRAGMVYMA-GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA---------NMRDRRSTLG 103 (302)
T ss_dssp TEEEEEC------CCSSCCBSCEEEEET-TEEEEESCBCSSSBCCCEEEEETTTTEEEEEC---------CCSSCCBSCE
T ss_pred CcEeEcc------cCCcccccceEEEEC-CEEEEEeCcCCCccccceEEECCCCCceeeCC---------CCCccccceE
Confidence 3698886 689999999999887 69999999988888899999999999999985 5789999999
Q ss_pred EEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCC--cCCCcEEEEE
Q 010034 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGK--KWLSDVYVLD 159 (519)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~--~~~~~v~~yd 159 (519)
+++++++||++||..+...++++++||+.+++|+.++ ++|.+|..|+++++++ +||++||.+.. ...+++++||
T Consensus 104 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 104 AAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGG-LLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETT-EEEEECCEETTTTEECCCEEEEE
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC---CCCCcccCceEEEECC-EEEEEeCCCCCCCccccEEEEEe
Confidence 9999999999999988778899999999999999998 6999999999999965 99999998765 3588999999
Q ss_pred CCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeE
Q 010034 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHT 239 (519)
Q Consensus 160 ~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s 239 (519)
+.+++|+.++ ++|.+|.+|+++.++++|||+||..... .++.+++||+.+++|+.+. .+|.+|.+|+
T Consensus 180 ~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~ 246 (302)
T 2xn4_A 180 ATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGPL-------VRKSVEVYDPTTNAWRQVA---DMNMCRRNAG 246 (302)
T ss_dssp TTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSSS-------BCCCEEEEETTTTEEEEEC---CCSSCCBSCE
T ss_pred CCCCcEEECC---CCccccccccEEEECCEEEEECCCCCCc-------ccceEEEEeCCCCCEeeCC---CCCCccccCe
Confidence 9999999998 8999999999999999999999987543 3577889999999999998 7899999999
Q ss_pred EEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEE
Q 010034 240 ITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLY 304 (519)
Q Consensus 240 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~i 304 (519)
+++.+++||++||.+... ..+++++||+++++|+.++.. .|.+|..|++++++++|
T Consensus 247 ~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 247 VCAVNGLLYVVGGDDGSC-------NLASVEYYNPTTDKWTVVSSC--MSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp EEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEECSSC--CSSCCBSCEEEEEEC--
T ss_pred EEEECCEEEEECCcCCCc-------ccccEEEEcCCCCeEEECCcc--cCcccccceEEEecccC
Confidence 999999999999986543 578999999999999999732 47799999999998765
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-42 Score=348.50 Aligned_cols=256 Identities=18% Similarity=0.282 Sum_probs=232.0
Q ss_pred ceeEEceeCCCCCCCCCCCcceEEEEECCcEEEEEcCc----CCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCc
Q 010034 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGL----VDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPR 77 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~gh~~~~~~~~~lyv~GG~----~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R 77 (519)
.+|+++. ++|.+|.+|+++.++ +.||++||. .+...++++++||+.+++|+.++ ++|.+|
T Consensus 49 ~~W~~~~------~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r 112 (308)
T 1zgk_A 49 GTWLRLA------DLQVPRSGLAGCVVG-GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA---------PMSVPR 112 (308)
T ss_dssp TEEEECC------CCSSCCBSCEEEEET-TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC---------CCSSCC
T ss_pred CeEeECC------CCCcccccceEEEEC-CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC---------CCCcCc
Confidence 4799986 689999999999887 699999998 56678899999999999999985 578999
Q ss_pred ceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEE
Q 010034 78 AFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYV 157 (519)
Q Consensus 78 ~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 157 (519)
..|++++++++|||+||..+...++++++||+.+++|+.++ ++|.+|..|+++++++ +||++||.++....+++++
T Consensus 113 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~ 188 (308)
T 1zgk_A 113 NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA---PMLTRRIGVGVAVLNR-LLYAVGGFDGTNRLNSAEC 188 (308)
T ss_dssp BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCCEEE
T ss_pred cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECC---CCCccccceEEEEECC-EEEEEeCCCCCCcCceEEE
Confidence 99999999999999999988778899999999999999998 6999999999999955 9999999988777999999
Q ss_pred EECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcce
Q 010034 158 LDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG 237 (519)
Q Consensus 158 yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~ 237 (519)
||+.+++|+.++ ++|.+|.+|+++.++++|||+||..... .++.+++||+.+++|+.+. ++|.+|..
T Consensus 189 yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~v~~yd~~~~~W~~~~---~~p~~r~~ 255 (308)
T 1zgk_A 189 YYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYAAGGYDGQD-------QLNSVERYDVETETWTFVA---PMKHRRSA 255 (308)
T ss_dssp EETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEECC---CCSSCCBS
T ss_pred EeCCCCeEeeCC---CCCCccccceEEEECCEEEEEeCCCCCC-------ccceEEEEeCCCCcEEECC---CCCCCccc
Confidence 999999999998 8999999999999999999999987543 3577889999999999998 78999999
Q ss_pred eEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe
Q 010034 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL 300 (519)
Q Consensus 238 ~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~ 300 (519)
|++++.+++|||+||..... ..+++++||+++++|+.++.+ |.+|..|+++++
T Consensus 256 ~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~l 308 (308)
T 1zgk_A 256 LGITVHQGRIYVLGGYDGHT-------FLDSVECYDPDTDTWSEVTRM---TSGRSGVGVAVT 308 (308)
T ss_dssp CEEEEETTEEEEECCBCSSC-------BCCEEEEEETTTTEEEEEEEC---SSCCBSCEEEEC
T ss_pred eEEEEECCEEEEEcCcCCCc-------ccceEEEEcCCCCEEeecCCC---CCCcccceeEeC
Confidence 99999999999999987543 678999999999999999874 669999998864
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=345.74 Aligned_cols=256 Identities=18% Similarity=0.270 Sum_probs=231.3
Q ss_pred ceeEEceeCCCCCCCCCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeE
Q 010034 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~ 81 (519)
.+|+++. ++|.+|.+|+++.++ +.||++||.. ...++++++||+.+++|+.++ ++|.+|.+|+
T Consensus 34 ~~W~~~~------~~p~~r~~~~~~~~~-~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~ 96 (306)
T 3ii7_A 34 YSWTDIR------CPFEKRRDAACVFWD-NVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKL---------GPPTPRDSLA 96 (306)
T ss_dssp TEEEECC------CCSCCCBSCEEEEET-TEEEEECCBS-SSBCCEEEEEETTTTEEEEEE---------CCSSCCBSCE
T ss_pred CCEecCC------CCCcccceeEEEEEC-CEEEEEeCCC-CCCcceEEEEeCCCCeEEECC---------CCCcccccee
Confidence 4799886 689999999999997 6999999988 778899999999999999985 5789999999
Q ss_pred EEEeCCeEEEEcccc-CCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcC----CCcEE
Q 010034 82 AVAIDCHMFIFGGRF-GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKW----LSDVY 156 (519)
Q Consensus 82 ~~~~~~~iyv~GG~~-~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~----~~~v~ 156 (519)
+++++++|||+||.+ +...++++++||+.+++|+.++ ++|.+|..|+++++++ +||++||.+.... .++++
T Consensus 97 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 97 ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANG-LIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp EEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETT-EEEEECCEESCTTTCEECCCEE
T ss_pred EEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECC-EEEEECCCCCCCCcccccceEE
Confidence 999999999999998 6667899999999999999997 6999999999999865 9999999876654 89999
Q ss_pred EEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcc
Q 010034 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRC 236 (519)
Q Consensus 157 ~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~ 236 (519)
+||+.+++|+.++ ++|.+|.+|+++.++++|||+||..... .++.+++||+.+++|+.+. ++|.+|.
T Consensus 173 ~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p~~r~ 239 (306)
T 3ii7_A 173 VYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGLG-------GLDNVEYYDIKLNEWKMVS---PMPWKGV 239 (306)
T ss_dssp EEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTE-------EBCCEEEEETTTTEEEECC---CCSCCBS
T ss_pred EeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCCC-------CCceEEEeeCCCCcEEECC---CCCCCcc
Confidence 9999999999998 8999999999999999999999987653 3578899999999999998 7899999
Q ss_pred eeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeC
Q 010034 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLG 301 (519)
Q Consensus 237 ~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~ 301 (519)
+|++++.+++|||+||.+... ..+++++||+++++|+.++.+ |.+|.+|+++.+.
T Consensus 240 ~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~ 294 (306)
T 3ii7_A 240 TVKCAAVGSIVYVLAGFQGVG-------RLGHILEYNTETDKWVANSKV---RAFPVTSCLICVV 294 (306)
T ss_dssp CCEEEEETTEEEEEECBCSSS-------BCCEEEEEETTTTEEEEEEEE---ECCSCTTCEEEEE
T ss_pred ceeEEEECCEEEEEeCcCCCe-------eeeeEEEEcCCCCeEEeCCCc---ccccceeEEEEEC
Confidence 999999999999999987643 678999999999999999875 5689999988774
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=342.44 Aligned_cols=257 Identities=21% Similarity=0.331 Sum_probs=233.5
Q ss_pred ceeEEceeCCCCCCCCCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCc---EEeeeecCCCCCCCCCCCCcc
Q 010034 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL---WFQPECTGNGSNGQVGPGPRA 78 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~---W~~l~~~~~~~~~~~~p~~R~ 78 (519)
.+|+++. ++|.+|.+|+++.++ +.||++||..+...++++++||+.+++ |+.++ ++|.+|.
T Consensus 41 ~~W~~~~------~~p~~r~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~---------~~p~~r~ 104 (301)
T 2vpj_A 41 QEWSFLP------SITRKRRYVASVSLH-DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA---------PMNVRRG 104 (301)
T ss_dssp TEEEECC------CCSSCCBSCEEEEET-TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC---------CCSSCCB
T ss_pred CeEEeCC------CCChhhccccEEEEC-CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC---------CCCCCcc
Confidence 4798887 588899999999988 699999999888889999999999999 99985 5789999
Q ss_pred eeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEE
Q 010034 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (519)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (519)
.|++++++++||++||..+...++++++||+.+++|+.++ ++|.+|..|+++++++ +||++||.++....+++++|
T Consensus 105 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 105 LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG---DMQTAREGAGLVVASG-VIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE---ECSSCCBSCEEEEETT-EEEEECCBCSSCBCCCEEEE
T ss_pred ceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECC---CCCCCcccceEEEECC-EEEEECCCCCCcccceEEEE
Confidence 9999999999999999998777899999999999999998 5999999999999955 99999999888889999999
Q ss_pred ECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCccee
Q 010034 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH 238 (519)
Q Consensus 159 d~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~ 238 (519)
|+.+++|+.++ ++|.+|.+|+++.++++|||+||..... .++.++.||+.+++|+.+. .+|.+|..|
T Consensus 181 d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~---~~p~~r~~~ 247 (301)
T 2vpj_A 181 DPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTA-------HLSSVEAYNIRTDSWTTVT---SMTTPRCYV 247 (301)
T ss_dssp ETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEEEC---CCSSCCBSC
T ss_pred eCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCc-------ccceEEEEeCCCCcEEECC---CCCCcccce
Confidence 99999999997 8999999999999999999999987654 2577889999999999998 789999999
Q ss_pred EEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeC
Q 010034 239 TITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLG 301 (519)
Q Consensus 239 s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~ 301 (519)
++++.+++||++||..... ..+++++||+++++|+.++.+ |.+|..|+++.++
T Consensus 248 ~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 248 GATVLRGRLYAIAGYDGNS-------LLSSIECYDPIIDSWEVVTSM---GTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEETTEEEEECCBCSSS-------BEEEEEEEETTTTEEEEEEEE---EEEEESCEEEEEE
T ss_pred eEEEECCEEEEEcCcCCCc-------ccccEEEEcCCCCeEEEcCCC---CcccccceEEEeC
Confidence 9999999999999987543 678999999999999999874 6699999998874
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=348.89 Aligned_cols=271 Identities=20% Similarity=0.233 Sum_probs=231.6
Q ss_pred ceeEEceeCCCCCCCCCCCcceEEEEECCcEEEEEcCcC------CCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCC
Q 010034 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLV------DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~gh~~~~~~~~~lyv~GG~~------~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~ 75 (519)
-+|+. .+ .+.|.+|.+|++++++ +.|||+||.. .....+++++||+.+++|+.++ ++|.
T Consensus 23 ~~W~~-~~----~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~ 87 (315)
T 4asc_A 23 NECYC-AS----LSSQVPKNHVSLVTKE-NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP---------PLPS 87 (315)
T ss_dssp TEEEE-EE----CCCCSCSSEEEEECTT-CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC---------CBSS
T ss_pred CeEec-CC----CCCCCCccceEEEEEC-CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC---------CCCc
Confidence 36876 31 2457799999999887 6999999962 1234567999999999999875 5789
Q ss_pred CcceeEEEEeCCeEEEEcccc---CCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecC-CCCcC
Q 010034 76 PRAFHIAVAIDCHMFIFGGRF---GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGW-DGKKW 151 (519)
Q Consensus 76 ~R~~h~~~~~~~~iyv~GG~~---~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~-~~~~~ 151 (519)
+|.+|++++++++|||+||.. +...++++++||+.+++|+.++ ++|.+|..|+++++++ +|||+||. +....
T Consensus 88 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 88 PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGHTVLSHMD-LVYVIGGKGSDRKC 163 (315)
T ss_dssp CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETT-EEEEECCBCTTSCB
T ss_pred chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccceeEEEECC-EEEEEeCCCCCCcc
Confidence 999999999999999999985 3567899999999999999998 6999999999999866 99999999 56677
Q ss_pred CCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCC
Q 010034 152 LSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQA 231 (519)
Q Consensus 152 ~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~ 231 (519)
.+++++||+.+++|+.++ ++|.+|..|+++.++++|||+||..... .++.+++||+.+++|+.++ ++
T Consensus 164 ~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~ 230 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDTG-------LTSSAEVYSITDNKWAPFE---AF 230 (315)
T ss_dssp CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSSS-------EEEEEEEEETTTTEEEEEC---CC
T ss_pred cceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCCC-------ccceEEEEECCCCeEEECC---CC
Confidence 899999999999999998 8999999999999999999999987654 3578899999999999998 78
Q ss_pred CCCcceeEEEEeCCEEEEEeccCCCCC--cccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEcc
Q 010034 232 PSSRCGHTITSGGHYLLLFGGHGTGGW--LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (519)
Q Consensus 232 P~~r~~~s~~~~~~~iyv~GG~~~~~~--~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG 309 (519)
|.+|.+|++++.+++|||+||...... ........+++|+||+++++|+.+ +|.+|..|+++++++++|++..
T Consensus 231 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 231 PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV-----LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE-----ESCSSCCSSCEEEEEEECGGGS
T ss_pred CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh-----ccCCcCccceEEeCCEEEEEEe
Confidence 999999999999999999999753100 000113678999999999999999 3558999999999999999875
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=5.6e-42 Score=350.02 Aligned_cols=287 Identities=17% Similarity=0.201 Sum_probs=225.9
Q ss_pred CCCCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcC--CCcEEeeeecCCCCCCCCCC-CCcceeEEEEeCCeEEE
Q 010034 15 TVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDID--NKLWFQPECTGNGSNGQVGP-GPRAFHIAVAIDCHMFI 91 (519)
Q Consensus 15 ~~P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~--~~~W~~l~~~~~~~~~~~~p-~~R~~h~~~~~~~~iyv 91 (519)
++|.+|.+|++++++ ++|||+||..+ +++|+||+. +++|+.++ ++| .+|.+|++++++++|||
T Consensus 5 ~lP~~r~~~~~~~~~-~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~---------~~p~~~R~~~~~~~~~~~lyv 70 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDN-DTVYIGLGSAG----TAWYKLDTQAKDKKWTALA---------AFPGGPRDQATSAFIDGNLYV 70 (357)
T ss_dssp CCSSCCCSCEEEEET-TEEEEECGGGT----TCEEEEETTSSSCCEEECC---------CCTTCCCBSCEEEEETTEEEE
T ss_pred CCCccccceEEEEEC-CEEEEEeCcCC----CeEEEEccccCCCCeeECC---------CCCCCcCccceEEEECCEEEE
Confidence 689999999999887 79999999764 589999998 49999985 467 79999999999999999
Q ss_pred Eccc-c----CCcCCCcEEEEECCCCeEEEEeeCCCCC-CCCCccEEEEECCcEEEEEecCCCC----------------
Q 010034 92 FGGR-F----GSRRLGDFWVLDTDIWQWSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGK---------------- 149 (519)
Q Consensus 92 ~GG~-~----~~~~~~dv~~yd~~t~~W~~~~~~g~~P-~~r~~~~~~~~~~~~iyv~GG~~~~---------------- 149 (519)
+||. . ....++++++||+.+++|+++++ ++ .+|..|++++.++ +|||+||.+..
T Consensus 71 ~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~ 146 (357)
T 2uvk_A 71 FGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMS---HAPMGMAGHVTFVHNG-KAYVTGGVNQNIFNGYFEDLNEAGKDS 146 (357)
T ss_dssp ECCEEECTTSCEEECCCEEEEETTTTEEEECSC---CCSSCCSSEEEEEETT-EEEEEECCCHHHHHHHHHHHHHHTTCH
T ss_pred EcCCCCCCCccceeeccEEEEeCCCCcEEECCC---CCCcccccceEEEECC-EEEEEeCcCCCcCcccccchhhcCCcc
Confidence 9998 3 23568999999999999999984 55 9999999999755 99999998753
Q ss_pred ------------------cCCCcEEEEECCCCcEEEeccCCCCCCcc-cCeeEEEeCCEEEEEcccCCCCCccccccccc
Q 010034 150 ------------------KWLSDVYVLDTISLEWMQLPVTGSVPPPR-CGHTATMVEKRLLIYGGRGGGGPIMGDLWALK 210 (519)
Q Consensus 150 ------------------~~~~~v~~yd~~t~~W~~l~~~~~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~ 210 (519)
...+++++||+.+++|+.+. ++|.+| .+|+++.++++|||+||....+.. .+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~------~~ 217 (357)
T 2uvk_A 147 TAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTWLINGEAKPGLR------TD 217 (357)
T ss_dssp HHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---ECSSCCCBSCEEEEETTEEEEECCEEETTEE------CC
T ss_pred cchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC---CCCCCCcccccEEEECCEEEEEeeecCCCcc------cC
Confidence 24689999999999999997 788765 459999999999999998654422 34
Q ss_pred cccccc--CCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCc----------ccccceeCcEEEEEcCCCe
Q 010034 211 GLIEEE--NETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWL----------SRYDIYYNDTIILDRLSAQ 278 (519)
Q Consensus 211 ~v~~Yd--~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~----------~~~~~~~~~v~~yd~~t~~ 278 (519)
.++.|| +.+++|+.+... +.|.+|.+|++++.+++|||+||....+.. .......+++++||+.+++
T Consensus 218 ~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 218 AVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp CEEEEECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred ceEEEEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 555565 499999999732 234456788899999999999997542200 0001235689999999999
Q ss_pred EEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCCC-CccceEEecCCCcccccccccC
Q 010034 279 WKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKS-TFGDIWWLVPEEDPIAKRYTES 336 (519)
Q Consensus 279 W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~~-~~~D~w~l~~~~d~~~~~w~~~ 336 (519)
|+.++.+ |.+|..|+++.++++|||+||.+... .++|+|.|++. .++|...
T Consensus 297 W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~----~~~~~~~ 348 (357)
T 2uvk_A 297 WDKSGEL---SQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVK----DNKVTVQ 348 (357)
T ss_dssp CEEEEEC---SSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-----CCSCEEE
T ss_pred eeeCCCC---CCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc----CcEeEee
Confidence 9999874 66999999999999999999988654 47898877665 5556554
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=343.52 Aligned_cols=261 Identities=20% Similarity=0.347 Sum_probs=223.9
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEcccc----C--CcCCCcE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF----G--SRRLGDF 104 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~----~--~~~~~dv 104 (519)
+.||++|| +++++||+.+++|...+ . +.|.+|.+|++++++++|||+||.. . ....+++
T Consensus 5 ~~l~~~GG-------~~~~~yd~~~~~W~~~~-~-------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 69 (315)
T 4asc_A 5 DLIFMISE-------EGAVAYDPAANECYCAS-L-------SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYF 69 (315)
T ss_dssp EEEEEEET-------TEEEEEETTTTEEEEEE-C-------CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEE
T ss_pred eEEEEEcC-------CceEEECCCCCeEecCC-C-------CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccce
Confidence 58999999 68999999999998732 1 3477999999999999999999973 1 2234569
Q ss_pred EEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCC---CCcCCCcEEEEECCCCcEEEeccCCCCCCcccCe
Q 010034 105 WVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD---GKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (519)
Q Consensus 105 ~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~ 181 (519)
++||+.+++|+.++ ++|.+|.+|+++++++ +|||+||.+ +....+++++||+.+++|++++ ++|.+|.+|
T Consensus 70 ~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~ 142 (315)
T 4asc_A 70 LQFDHLDSEWLGMP---PLPSPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGH 142 (315)
T ss_dssp EEEETTTTEEEECC---CBSSCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSC
T ss_pred EEecCCCCeEEECC---CCCcchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccce
Confidence 99999999999987 6999999999999965 999999974 3567899999999999999998 899999999
Q ss_pred eEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCccc
Q 010034 182 TATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSR 261 (519)
Q Consensus 182 ~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~ 261 (519)
+++.++++|||+||...... .++.+++||+.+++|+.++ ++|.+|..|++++.+++|||+||....+
T Consensus 143 ~~~~~~~~iyv~GG~~~~~~------~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~---- 209 (315)
T 4asc_A 143 TVLSHMDLVYVIGGKGSDRK------CLNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDTG---- 209 (315)
T ss_dssp EEEEETTEEEEECCBCTTSC------BCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSSS----
T ss_pred eEEEECCEEEEEeCCCCCCc------ccceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCCC----
Confidence 99999999999999854333 3577888999999999998 7899999999999999999999987654
Q ss_pred ccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCC---------CCccceEEecCCCcccccc
Q 010034 262 YDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK---------STFGDIWWLVPEEDPIAKR 332 (519)
Q Consensus 262 ~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~---------~~~~D~w~l~~~~d~~~~~ 332 (519)
..+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.++. ..++|+|. ||+.+++
T Consensus 210 ---~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~----yd~~~~~ 279 (315)
T 4asc_A 210 ---LTSSAEVYSITDNKWAPFEA---FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWR----YNEEEKK 279 (315)
T ss_dssp ---EEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEE----EETTTTE
T ss_pred ---ccceEEEEECCCCeEEECCC---CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEE----ecCCCCh
Confidence 67899999999999999986 46799999999999999999998542 24566665 5566777
Q ss_pred cccC
Q 010034 333 YTES 336 (519)
Q Consensus 333 w~~~ 336 (519)
|+..
T Consensus 280 W~~~ 283 (315)
T 4asc_A 280 WEGV 283 (315)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 8776
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=9.9e-42 Score=342.89 Aligned_cols=271 Identities=20% Similarity=0.256 Sum_probs=229.4
Q ss_pred ceeEEceeCCCCCCCCCCCcceEEEEECCcEEEEEcCcCC------CccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCC
Q 010034 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVD------KRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~gh~~~~~~~~~lyv~GG~~~------~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~ 75 (519)
-+|..... +.|.+|.+|+++.++ +.||++||... ....+++++||+.+++|+.++ ++|.
T Consensus 34 ~~W~~~~~-----~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~ 98 (318)
T 2woz_A 34 NECYLTAL-----AEQIPRNHSSIVTQQ-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP---------PLPS 98 (318)
T ss_dssp TEEEEEEE-----CTTSCSSEEEEECSS-SCEEEEESSCC-------CCCBEEEEEETTTTEEEECS---------CBSS
T ss_pred CceecccC-----CccCCccceEEEEEC-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC---------CCCc
Confidence 36887331 456889999998877 69999999631 123345999999999999975 5789
Q ss_pred CcceeEEEEeCCeEEEEcccc--CCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCC-CCcCC
Q 010034 76 PRAFHIAVAIDCHMFIFGGRF--GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWL 152 (519)
Q Consensus 76 ~R~~h~~~~~~~~iyv~GG~~--~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~-~~~~~ 152 (519)
+|..|++++++++|||+||.. +...++++++||+.+++|+.++ ++|.+|.+|++++.++ +||++||.+ .....
T Consensus 99 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 99 ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPIKVYGHNVISHNG-MIYCLGGKTDDKKCT 174 (318)
T ss_dssp CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSSCEESCEEEEETT-EEEEECCEESSSCBC
T ss_pred cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCCcccccEEEEECC-EEEEEcCCCCCCCcc
Confidence 999999999999999999986 4566889999999999999998 6999999999999855 999999984 44578
Q ss_pred CcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCC
Q 010034 153 SDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP 232 (519)
Q Consensus 153 ~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P 232 (519)
+++++||+.+++|++++ ++|.+|..|+++.++++|||+||..... .++.+++||+.+++|+.+. ++|
T Consensus 175 ~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p 241 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVIAGGVTEDG-------LSASVEAFDLKTNKWEVMT---EFP 241 (318)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEEETTE-------EEEEEEEEETTTCCEEECC---CCS
T ss_pred ceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEEEEcCcCCCC-------ccceEEEEECCCCeEEECC---CCC
Confidence 99999999999999998 8999999999999999999999987643 3578899999999999998 789
Q ss_pred CCcceeEEEEeCCEEEEEeccCCCCCcc--cccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEcc
Q 010034 233 SSRCGHTITSGGHYLLLFGGHGTGGWLS--RYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (519)
Q Consensus 233 ~~r~~~s~~~~~~~iyv~GG~~~~~~~~--~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG 309 (519)
.+|.+|++++.+++||++||........ ......+++|+||+++++|+.+ .|.+|..|+++.++++|||+..
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-----LKEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-----ESCCGGGTTCEEEEEEEEGGGC
T ss_pred CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-----cccccccccceeeCCEEEEEEe
Confidence 9999999999999999999986521000 0013578999999999999998 3568999999999999999853
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.9e-41 Score=337.86 Aligned_cols=271 Identities=19% Similarity=0.328 Sum_probs=229.2
Q ss_pred CCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEcccc
Q 010034 17 PQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF 96 (519)
Q Consensus 17 P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~ 96 (519)
..+|.++... +.||++||. ++++||+.+++|...+. +.|.+|..|++++.+++||++||..
T Consensus 6 ~~~r~~~~~~----~~i~~~GG~-------~~~~yd~~~~~W~~~~~--------~~~~~r~~~~~~~~~~~lyv~GG~~ 66 (318)
T 2woz_A 6 DIPRHGMFVK----DLILLVNDT-------AAVAYDPMENECYLTAL--------AEQIPRNHSSIVTQQNQVYVVGGLY 66 (318)
T ss_dssp SSCCCCCSEE----EEEEEECSS-------EEEEEETTTTEEEEEEE--------CTTSCSSEEEEECSSSCEEEEESSC
T ss_pred ccccccceec----chhhhcccc-------ceEEECCCCCceecccC--------CccCCccceEEEEECCEEEEECCcc
Confidence 3577776543 689999993 48999999999988432 3468899999999999999999963
Q ss_pred C------CcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCC--CCcCCCcEEEEECCCCcEEEe
Q 010034 97 G------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD--GKKWLSDVYVLDTISLEWMQL 168 (519)
Q Consensus 97 ~------~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~t~~W~~l 168 (519)
. ....+++++||+.+++|+.++ ++|.+|..|+++++++ +|||+||.+ +....+++++||+.+++|+++
T Consensus 67 ~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~ 142 (318)
T 2woz_A 67 VDEENKDQPLQSYFFQLDNVSSEWVGLP---PLPSARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV 142 (318)
T ss_dssp C-------CCCBEEEEEETTTTEEEECS---CBSSCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE
T ss_pred cCccccCCCccccEEEEeCCCCcEEECC---CCCccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCCCEeEC
Confidence 1 122345999999999999997 6999999999999965 999999986 456789999999999999999
Q ss_pred ccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEE
Q 010034 169 PVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLL 248 (519)
Q Consensus 169 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iy 248 (519)
+ ++|.+|.+|+++.++++|||+||...... .++.+++||+.+++|+.++ ++|.+|..|++++.+++||
T Consensus 143 ~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~------~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iy 210 (318)
T 2woz_A 143 K---NLPIKVYGHNVISHNGMIYCLGGKTDDKK------CTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIV 210 (318)
T ss_dssp C---CCSSCEESCEEEEETTEEEEECCEESSSC------BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEE
T ss_pred C---CCCCcccccEEEEECCEEEEEcCCCCCCC------ccceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEE
Confidence 8 89999999999999999999999865432 3577888999999999998 7899999999999999999
Q ss_pred EEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCC---------CCccce
Q 010034 249 LFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK---------STFGDI 319 (519)
Q Consensus 249 v~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~---------~~~~D~ 319 (519)
|+||....+ ..+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.+.. ...+|+
T Consensus 211 v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v 280 (318)
T 2woz_A 211 IAGGVTEDG-------LSASVEAFDLKTNKWEVMTE---FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDI 280 (318)
T ss_dssp EEEEEETTE-------EEEEEEEEETTTCCEEECCC---CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCE
T ss_pred EEcCcCCCC-------ccceEEEEECCCCeEEECCC---CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeE
Confidence 999987543 67899999999999999987 46699999999999999999998752 346787
Q ss_pred EEecCCCcccccccccC
Q 010034 320 WWLVPEEDPIAKRYTES 336 (519)
Q Consensus 320 w~l~~~~d~~~~~w~~~ 336 (519)
|.| |+.+++|+..
T Consensus 281 ~~y----d~~~~~W~~~ 293 (318)
T 2woz_A 281 WKY----EDDKKEWAGM 293 (318)
T ss_dssp EEE----ETTTTEEEEE
T ss_pred EEE----eCCCCEehhh
Confidence 765 4556777765
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.3e-38 Score=352.88 Aligned_cols=286 Identities=18% Similarity=0.194 Sum_probs=231.1
Q ss_pred CCCCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeee-ecCCCCCCCCCCCCcceeEEEEe--CCeEEE
Q 010034 15 TVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPE-CTGNGSNGQVGPGPRAFHIAVAI--DCHMFI 91 (519)
Q Consensus 15 ~~P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~-~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv 91 (519)
..|.+|.+|+++ ++ +.|||+||.+. ..++++|+||+.+++|+.++ ... ...+|.+|.+|+++++ +++|||
T Consensus 384 ~~p~rr~g~~~~-~~-~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p----~~~~p~~R~~hs~~~~~~~~~lyv 456 (695)
T 2zwa_A 384 CPINRKFGDVDV-AG-NDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVS----SSEVPVARMCHTFTTISRNNQLLL 456 (695)
T ss_dssp CTTCCBSCEEEE-CS-SCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCC----CSCCCCCCBSCEEEEETTTTEEEE
T ss_pred CCCCCceeEEEE-EC-CEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCC----CCCCCccccceEEEEEccCCEEEE
Confidence 456677777655 55 68999999987 88899999999999999987 321 1247999999999999 999999
Q ss_pred EccccCCc-CCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEecc
Q 010034 92 FGGRFGSR-RLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPV 170 (519)
Q Consensus 92 ~GG~~~~~-~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~ 170 (519)
+||..+.. .++++|+||+.+++|+.++ ++|.+|..|+++++.+++|||+||.+... ++++||+.+++|+.+++
T Consensus 457 ~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 457 IGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp ECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCC
T ss_pred EcCCCCCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccC
Confidence 99998754 7899999999999999997 69999999999997556999999997665 89999999999999997
Q ss_pred CCCCCCcccCeeEEEeC---CEEEEEcccCCCCCcccccccccccccccCCCCc------eEEecCCCCCCCCcceeEEE
Q 010034 171 TGSVPPPRCGHTATMVE---KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG------WTQLKLPGQAPSSRCGHTIT 241 (519)
Q Consensus 171 ~~~~p~~r~~~~~~~~~---~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~------W~~i~~~g~~P~~r~~~s~~ 241 (519)
.+.+|.+|.+|+++.++ ++|||+||....+.. .++.+++||+.+++ |+.+.. .+|.+|.+|+++
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~-----~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~~ 603 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT-----VSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQIK 603 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC-----BCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEEE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe-----eeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceEE
Confidence 77799999999988875 899999998654311 35778889999999 898872 135889999999
Q ss_pred EeC-CEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCC----CCCCCcceEEEEeCC-EEEEEccCCCCC-
Q 010034 242 SGG-HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNE----PPPARAYHSMTCLGS-LYLLFGGFDGKS- 314 (519)
Q Consensus 242 ~~~-~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~----~p~~R~~~~~v~~~~-~iyv~GG~~~~~- 314 (519)
+.+ ++|||+||.+.... ....+++++||+.+++|+.+..... +++.+.+|+++.+++ +|||+||...+.
T Consensus 604 ~~~~~~iyv~GG~~~~~~----~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfs 679 (695)
T 2zwa_A 604 YITPRKLLIVGGTSPSGL----FDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYG 679 (695)
T ss_dssp EEETTEEEEECCBCSSCC----CCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTT
T ss_pred EeCCCEEEEECCccCCCC----CCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcC
Confidence 998 99999999865431 1357899999999999996543211 123678899998876 999999965432
Q ss_pred ---CccceEEecC
Q 010034 315 ---TFGDIWWLVP 324 (519)
Q Consensus 315 ---~~~D~w~l~~ 324 (519)
.++++|.+++
T Consensus 680 fGt~~n~i~~ldl 692 (695)
T 2zwa_A 680 FGSVTNVGLKLIA 692 (695)
T ss_dssp SCEEECCCEEEEE
T ss_pred ccccccceEEEEE
Confidence 3456666654
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.6e-36 Score=308.08 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=201.9
Q ss_pred ceeEEceeCCCCCCCC-CCCcceEEEEECCcEEEEEcCc-C----CCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCC
Q 010034 2 HYWVRASSSDFGGTVP-QPRSGHSAVNIGKSKVVVFGGL-V----DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P-~~R~gh~~~~~~~~~lyv~GG~-~----~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~ 75 (519)
.+|++++ ++| .+|.+|++++++ ++||||||. . ....++++|+||+.+++|+.++.. .|.
T Consensus 43 ~~W~~~~------~~p~~~R~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~--------~p~ 107 (357)
T 2uvk_A 43 KKWTALA------AFPGGPRDQATSAFID-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSH--------APM 107 (357)
T ss_dssp CCEEECC------CCTTCCCBSCEEEEET-TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCC--------CSS
T ss_pred CCeeECC------CCCCCcCccceEEEEC-CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCC--------CCc
Confidence 4799987 578 799999999998 699999998 2 245789999999999999998632 259
Q ss_pred CcceeEEEEeCCeEEEEccccCC----------------------------------cCCCcEEEEECCCCeEEEEeeCC
Q 010034 76 PRAFHIAVAIDCHMFIFGGRFGS----------------------------------RRLGDFWVLDTDIWQWSELTSFG 121 (519)
Q Consensus 76 ~R~~h~~~~~~~~iyv~GG~~~~----------------------------------~~~~dv~~yd~~t~~W~~~~~~g 121 (519)
+|.+|++++++++|||+||.+.. ..++++++||+.+++|+.++
T Consensus 108 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--- 184 (357)
T 2uvk_A 108 GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG--- 184 (357)
T ss_dssp CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---
T ss_pred ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC---
Confidence 99999999999999999998653 24689999999999999997
Q ss_pred CCCCCCCc-cEEEEECCcEEEEEecCCCC-cCCCcEEEEEC--CCCcEEEeccCCCCCCc--ccCeeEEEeCCEEEEEcc
Q 010034 122 DLPSPRDF-AAASAIGNRKIVMYGGWDGK-KWLSDVYVLDT--ISLEWMQLPVTGSVPPP--RCGHTATMVEKRLLIYGG 195 (519)
Q Consensus 122 ~~P~~r~~-~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~--~t~~W~~l~~~~~~p~~--r~~~~~~~~~~~lyv~GG 195 (519)
++|.+|.. |+++++++ +|||+||.+.. ...++++.||+ .+++|+.++ ++|.+ |.+|+++.++++|||+||
T Consensus 185 ~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~---~~~~~~~~~~~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 185 ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA---PVSSPDGVAGGFAGISNDSLIFAGG 260 (357)
T ss_dssp ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---CEEEECC---CSSTTTCCBSCEEEEETTEEEEECC
T ss_pred CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCCcEEecC---CCCCCcccccceEEEECCEEEEEcC
Confidence 58876555 88888865 99999998643 35788999987 999999997 55544 668889999999999999
Q ss_pred cCCCCCc----------ccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccce
Q 010034 196 RGGGGPI----------MGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (519)
Q Consensus 196 ~~~~~~~----------~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~ 265 (519)
.+..+.. ....-.++.+++||+.+++|+.+. .+|.+|..|++++.+++|||+||.+..+ ..
T Consensus 261 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~------~~ 331 (357)
T 2uvk_A 261 AGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG---ELSQGRAYGVSLPWNNSLLIIGGETAGG------KA 331 (357)
T ss_dssp EECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE---ECSSCCBSSEEEEETTEEEEEEEECGGG------CE
T ss_pred ccccCCcccccccceeccccccceeeEEEEecCCCceeeCC---CCCCCcccceeEEeCCEEEEEeeeCCCC------CE
Confidence 7643210 111123467889999999999997 7899999999999999999999987643 35
Q ss_pred eCcEEEEEcCCCeEEEcccC
Q 010034 266 YNDTIILDRLSAQWKRLPIG 285 (519)
Q Consensus 266 ~~~v~~yd~~t~~W~~v~~~ 285 (519)
.+++++|+.++++|......
T Consensus 332 ~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 332 VTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEEEEEEC-CCSCEEEC--
T ss_pred eeeEEEEEEcCcEeEeeecc
Confidence 79999999999999987654
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.9e-33 Score=311.41 Aligned_cols=239 Identities=17% Similarity=0.205 Sum_probs=201.9
Q ss_pred CCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEe-e--CCCCCCCCCccEEEEEC-CcEEEEEecCC
Q 010034 72 VGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELT-S--FGDLPSPRDFAAASAIG-NRKIVMYGGWD 147 (519)
Q Consensus 72 ~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~-~--~g~~P~~r~~~~~~~~~-~~~iyv~GG~~ 147 (519)
..|.+|.+|++ +++++|||+||..+ ..++++++||+.+++|+.++ + .+.+|.+|.+|+++++. +++|||+||.+
T Consensus 384 ~~p~rr~g~~~-~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~ 461 (695)
T 2zwa_A 384 CPINRKFGDVD-VAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRK 461 (695)
T ss_dssp CTTCCBSCEEE-ECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBS
T ss_pred CCCCCceeEEE-EECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCC
Confidence 35666776554 48999999999987 78899999999999999998 4 35699999999999994 45999999998
Q ss_pred CCc-CCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEe
Q 010034 148 GKK-WLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL 225 (519)
Q Consensus 148 ~~~-~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i 225 (519)
... .++++|+||+.+++|+.++ ++|.+|.+|+++.+ +++|||+||.+... .+++||+.+++|+.+
T Consensus 462 ~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----------~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 462 APHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP----------AMLLYNVTEEIFKDV 528 (695)
T ss_dssp STTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC----------SEEEEETTTTEEEEC
T ss_pred CCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC----------CEEEEECCCCceEEc
Confidence 654 7899999999999999998 89999999999997 99999999986542 678899999999999
Q ss_pred cCCCCCCCCcceeEEEEeC---CEEEEEeccCCCCCcccccceeCcEEEEEcCCCe------EEEcccCCCCCCCCcceE
Q 010034 226 KLPGQAPSSRCGHTITSGG---HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ------WKRLPIGNEPPPARAYHS 296 (519)
Q Consensus 226 ~~~g~~P~~r~~~s~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~------W~~v~~~~~~p~~R~~~~ 296 (519)
+..+.+|.+|.+|++++++ ++|||+||...++ ....+++|+||+.+++ |+.+..+ ++.+|.+|+
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~-----~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~ 601 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ-----TTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQ 601 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS-----SCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCE
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC-----CeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccce
Confidence 9777799999999977766 8999999986542 1367999999999999 8998874 457999999
Q ss_pred EEEeC-CEEEEEccCCCCC---CccceEEecCCCcccccccccC
Q 010034 297 MTCLG-SLYLLFGGFDGKS---TFGDIWWLVPEEDPIAKRYTES 336 (519)
Q Consensus 297 ~v~~~-~~iyv~GG~~~~~---~~~D~w~l~~~~d~~~~~w~~~ 336 (519)
++.++ ++|||+||.++.. ..+++|.| |+.+++|...
T Consensus 602 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y----d~~t~~W~~~ 641 (695)
T 2zwa_A 602 IKYITPRKLLIVGGTSPSGLFDRTNSIISL----DPLSETLTSI 641 (695)
T ss_dssp EEEEETTEEEEECCBCSSCCCCTTTSEEEE----ETTTTEEEEC
T ss_pred EEEeCCCEEEEECCccCCCCCCCCCeEEEE----ECCCCeEEEe
Confidence 99999 9999999987653 57787655 4556677643
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=3.3e-33 Score=308.27 Aligned_cols=306 Identities=12% Similarity=0.104 Sum_probs=223.4
Q ss_pred eeEEceeCCCCCCCCCCCcceEEEEEC-CcEEEEEcCcCCCc------cCCcEEEEEcCCCcEEeeeecCCCCCCCCCCC
Q 010034 3 YWVRASSSDFGGTVPQPRSGHSAVNIG-KSKVVVFGGLVDKR------FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (519)
Q Consensus 3 ~W~~~~~~~~~g~~P~~R~gh~~~~~~-~~~lyv~GG~~~~~------~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~ 75 (519)
+|..+.+ .||.+|+++++. +++||++||..... ..+++++||+.+++|+.+.. +|.
T Consensus 177 ~W~~~~~--------~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~---------~~~ 239 (656)
T 1k3i_A 177 RWGPTID--------LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV---------TVT 239 (656)
T ss_dssp EEEEEEE--------CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE---------EEC
T ss_pred eeeeecc--------CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc---------cCC
Confidence 6887762 345667777663 58999999976432 34579999999999998863 455
Q ss_pred Cccee--EEEE-eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEec-CCCCcC
Q 010034 76 PRAFH--IAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGG-WDGKKW 151 (519)
Q Consensus 76 ~R~~h--~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG-~~~~~~ 151 (519)
+|..| ++++ .+++||++||.... ++++||+.+++|++++ +||.+|..|+++++.+++|||+|| .++...
T Consensus 240 ~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 240 KHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGP---DMQVARGYQSSATMSDGRVFTIGGSWSGGVF 312 (656)
T ss_dssp SCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECC---CCSSCCSSCEEEECTTSCEEEECCCCCSSSC
T ss_pred CCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECC---CCCccccccceEEecCCeEEEEeCcccCCcc
Confidence 55444 3444 58999999998653 7999999999999997 699999999999986669999999 566667
Q ss_pred CCcEEEEECCCCcEEEeccCC--CCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCC
Q 010034 152 LSDVYVLDTISLEWMQLPVTG--SVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPG 229 (519)
Q Consensus 152 ~~~v~~yd~~t~~W~~l~~~~--~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g 229 (519)
.+++++||+.+++|+.++..+ +++.+|.. +++..++++|++||.++.... ....+.++.||+.++.|.......
T Consensus 313 ~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~---~~~~~~v~~yd~~~~~w~~~~~~~ 388 (656)
T 1k3i_A 313 EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQ---AGPSTAMNWYYTSGSGDVKSAGKR 388 (656)
T ss_dssp CCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEE---CCSSSEEEEEECSTTCEEEEEEEC
T ss_pred cccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEE---ecCccceeeeecCCcceeecCCcc
Confidence 899999999999999985322 34455543 455568999999998643110 012467889999999998654211
Q ss_pred CC----CCCcceeEEEE---eCCEEEEEeccCCCCCcccccceeC---cEEEEEcCCCeEEEcccCCCCCCCCcceEEEE
Q 010034 230 QA----PSSRCGHTITS---GGHYLLLFGGHGTGGWLSRYDIYYN---DTIILDRLSAQWKRLPIGNEPPPARAYHSMTC 299 (519)
Q Consensus 230 ~~----P~~r~~~s~~~---~~~~iyv~GG~~~~~~~~~~~~~~~---~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~ 299 (519)
.. +.++..++++. .+++||++||...... ....+ ++++||+.+++|..+. ....|.+|..|+++.
T Consensus 389 ~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~----~~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~ 463 (656)
T 1k3i_A 389 QSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD----SDATTNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVV 463 (656)
T ss_dssp EETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS----SBCCCCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEE
T ss_pred ccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC----CCcCCcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEE
Confidence 11 12233444443 6899999999753110 12334 7899999999999987 122577999999988
Q ss_pred e-CCEEEEEccCCC------CCCccceEEecCCCcccccccccCCCCCCCCCC
Q 010034 300 L-GSLYLLFGGFDG------KSTFGDIWWLVPEEDPIAKRYTESPPKVLPENK 345 (519)
Q Consensus 300 ~-~~~iyv~GG~~~------~~~~~D~w~l~~~~d~~~~~w~~~~~~~~p~~~ 345 (519)
+ +++|||+||.+. ...++++ +.||+.+++|+..++++.|+..
T Consensus 464 l~~g~i~v~GG~~~~~~~~~~~~~~~v----~~ydp~t~~W~~~~~~~~~R~~ 512 (656)
T 1k3i_A 464 LPDGSTFITGGQRRGIPFEDSTPVFTP----EIYVPEQDTFYKQNPNSIVRVY 512 (656)
T ss_dssp CTTSCEEEECCBSBCCTTCCCSBCCCC----EEEEGGGTEEEECCCCSSCCCT
T ss_pred CCCCCEEEECCcccCcCcCCCCcccce----EEEcCCCCceeecCCCCCcccc
Confidence 8 999999999763 2335554 4577888999998877777654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.98 E-value=6.5e-32 Score=297.95 Aligned_cols=280 Identities=16% Similarity=0.105 Sum_probs=210.3
Q ss_pred eeEEceeCCCCCCCCCCCcce--EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCccee
Q 010034 3 YWVRASSSDFGGTVPQPRSGH--SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFH 80 (519)
Q Consensus 3 ~W~~~~~~~~~g~~P~~R~gh--~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h 80 (519)
+|+++. .+|.+|..| +++++.+++||++||..+. ++++||+.+++|+.+. ++|.+|.+|
T Consensus 230 ~w~~~~------~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~---------~~~~~R~~~ 290 (656)
T 1k3i_A 230 IVSDRT------VTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGP---------DMQVARGYQ 290 (656)
T ss_dssp CBCCCE------EEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECC---------CCSSCCSSC
T ss_pred cEEeCc------ccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECC---------CCCcccccc
Confidence 576665 456666555 4566666899999997653 7999999999999974 589999999
Q ss_pred EEEEe-CCeEEEEcc-ccCCcCCCcEEEEECCCCeEEEEeeCC--CCCCCCCccEEEEECCcEEEEEecCCCC----cCC
Q 010034 81 IAVAI-DCHMFIFGG-RFGSRRLGDFWVLDTDIWQWSELTSFG--DLPSPRDFAAASAIGNRKIVMYGGWDGK----KWL 152 (519)
Q Consensus 81 ~~~~~-~~~iyv~GG-~~~~~~~~dv~~yd~~t~~W~~~~~~g--~~P~~r~~~~~~~~~~~~iyv~GG~~~~----~~~ 152 (519)
+++++ +++|||+|| .++...++++++||+.+++|+.++..+ +++..|. ++++.. ++++|++||.++. ...
T Consensus 291 s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~-~~~iyv~Gg~~g~~~~~~~~ 368 (656)
T 1k3i_A 291 SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRS-DNHAWLFGWKKGSVFQAGPS 368 (656)
T ss_dssp EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTT-TCSCCEEECGGGCEEECCSS
T ss_pred ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-cceeec-CCceEEEECCCCcEEEecCc
Confidence 99999 999999999 566667899999999999999985321 3555554 333333 5599999998764 246
Q ss_pred CcEEEEECCCCcEEEeccCCCC----CCcccCeeEEE---eCCEEEEEcccCCCC--CcccccccccccccccCCCCceE
Q 010034 153 SDVYVLDTISLEWMQLPVTGSV----PPPRCGHTATM---VEKRLLIYGGRGGGG--PIMGDLWALKGLIEEENETPGWT 223 (519)
Q Consensus 153 ~~v~~yd~~t~~W~~l~~~~~~----p~~r~~~~~~~---~~~~lyv~GG~~~~~--~~~~d~~~l~~v~~Yd~~t~~W~ 223 (519)
++++.||+.+++|......... +.++..+++++ .+++|||+||..... ...+ ....+++||+.+++|+
T Consensus 369 ~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~---~~~~v~~yd~~~~~W~ 445 (656)
T 1k3i_A 369 TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT---NAHIITLGEPGTSPNT 445 (656)
T ss_dssp SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC---CEEEEECCSTTSCCEE
T ss_pred cceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC---cceEEEcCCCCCCCee
Confidence 7899999999999865421111 12334455554 489999999975321 1111 1236889999999999
Q ss_pred EecCCCCCCCCcceeEEEEe-CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe--
Q 010034 224 QLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-- 300 (519)
Q Consensus 224 ~i~~~g~~P~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-- 300 (519)
.+. .+.+|.+|..|++++. +++|||+||...... .......+++++||+.+++|+.+..+ |.+|..|+++++
T Consensus 446 ~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~-~~~~~~~~~v~~ydp~t~~W~~~~~~---~~~R~~hs~a~ll~ 520 (656)
T 1k3i_A 446 VFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIP-FEDSTPVFTPEIYVPEQDTFYKQNPN---SIVRVYHSISLLLP 520 (656)
T ss_dssp EEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCT-TCCCSBCCCCEEEEGGGTEEEECCCC---SSCCCTTEEEEECT
T ss_pred EEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcC-cCCCCcccceEEEcCCCCceeecCCC---CCccccccHhhcCC
Confidence 986 2378999999998887 999999999763210 00124678999999999999998874 669999998888
Q ss_pred CCEEEEEccCC
Q 010034 301 GSLYLLFGGFD 311 (519)
Q Consensus 301 ~~~iyv~GG~~ 311 (519)
+++|||+||..
T Consensus 521 dg~v~v~GG~~ 531 (656)
T 1k3i_A 521 DGRVFNGGGGL 531 (656)
T ss_dssp TSCEEEEECCC
T ss_pred CcEEEecCCCC
Confidence 99999999964
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.83 E-value=0.0046 Score=58.36 Aligned_cols=190 Identities=13% Similarity=0.048 Sum_probs=119.3
Q ss_pred cceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEE
Q 010034 77 RAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVY 156 (519)
Q Consensus 77 R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~ 156 (519)
-+-+.....++.+|+-.|..+. +.+.++|+.+++=.... ++|..-++.+++..++ +||+....+ +.++
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~-~ly~ltw~~-----~~v~ 88 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRD-RLIQLTWRN-----HEGF 88 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETT-EEEEEESSS-----SEEE
T ss_pred cccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCC-EEEEEEeeC-----CEEE
Confidence 3456777788999999987654 46899999999776544 3666656666677755 999986543 5699
Q ss_pred EEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-ecCCCCCCCCc
Q 010034 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAPSSR 235 (519)
Q Consensus 157 ~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~-i~~~g~~P~~r 235 (519)
+||+.|.+-..- .+.+..+.+++..+++||+.-|. +.+..+|+.+.+-.. +.+. ..+.+.
T Consensus 89 v~D~~tl~~~~t-----i~~~~~Gwglt~dg~~L~vSdgs-------------~~l~~iDp~t~~~~~~I~V~-~~g~~~ 149 (243)
T 3mbr_X 89 VYDLATLTPRAR-----FRYPGEGWALTSDDSHLYMSDGT-------------AVIRKLDPDTLQQVGSIKVT-AGGRPL 149 (243)
T ss_dssp EEETTTTEEEEE-----EECSSCCCEEEECSSCEEEECSS-------------SEEEEECTTTCCEEEEEECE-ETTEEC
T ss_pred EEECCcCcEEEE-----EeCCCCceEEeeCCCEEEEECCC-------------CeEEEEeCCCCeEEEEEEEc-cCCccc
Confidence 999998764432 22334567777667889997652 445667999876543 3321 122221
Q ss_pred -ceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEE---cccCCC------CCCCCcceEEEEe--CCE
Q 010034 236 -CGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR---LPIGNE------PPPARAYHSMTCL--GSL 303 (519)
Q Consensus 236 -~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~---v~~~~~------~p~~R~~~~~v~~--~~~ 303 (519)
.---+...+++||+--- ..++|.+.|+.+.+-.. +..... .+..-.-.+++.. +++
T Consensus 150 ~~lNeLe~~~G~lyanvw------------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 150 DNLNELEWVNGELLANVW------------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp CCEEEEEEETTEEEEEET------------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred ccceeeEEeCCEEEEEEC------------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 11223446888886332 24789999999876543 332211 0111233455555 578
Q ss_pred EEEEcc
Q 010034 304 YLLFGG 309 (519)
Q Consensus 304 iyv~GG 309 (519)
+||.|-
T Consensus 218 lfVTGK 223 (243)
T 3mbr_X 218 LFVTGK 223 (243)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 999884
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.65 E-value=0.053 Score=53.23 Aligned_cols=223 Identities=9% Similarity=0.003 Sum_probs=126.2
Q ss_pred CCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEE-EEeeCCCC
Q 010034 45 LSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWS-ELTSFGDL 123 (519)
Q Consensus 45 ~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~-~~~~~g~~ 123 (519)
-+.+-+||+.++++..--.... ...+.....+.++..++++|+..... +.+.++|+.+.+-. .++ ..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~----n~~~lg~~~~~i~~~~~~lyv~~~~~-----~~v~viD~~t~~~~~~i~---~~ 83 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRA----NGFKLGDVAQSMVIRDGIGWIVVNNS-----HVIFAIDINTFKEVGRIT---GF 83 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHH----HSSCCBSCEEEEEEETTEEEEEEGGG-----TEEEEEETTTCCEEEEEE---CC
T ss_pred CceEEEEECCCCEEhhhhHhhh----cCcccCccceEEEEECCEEEEEEcCC-----CEEEEEECcccEEEEEcC---CC
Confidence 4678999999988765211000 01234445566777899999986532 46999999988763 343 12
Q ss_pred CCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEE-eccCCCCC-CcccCeeEEEeCCEEEEEcccCCCCC
Q 010034 124 PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-LPVTGSVP-PPRCGHTATMVEKRLLIYGGRGGGGP 201 (519)
Q Consensus 124 P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-l~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~ 201 (519)
..| +.++...++++|+.... .+.+.++|+.+++-.. ++. +... ....-+.++..++++||..-. .
T Consensus 84 ~~p---~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p~~i~~~~~~lyv~~~~--~-- 150 (328)
T 3dsm_A 84 TSP---RYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIEC-PDMDMESGSTEQMVQYGKYVYVNCWS--Y-- 150 (328)
T ss_dssp SSE---EEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEEC-TTCCTTTCBCCCEEEETTEEEEEECT--T--
T ss_pred CCC---cEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEc-CCccccCCCcceEEEECCEEEEEcCC--C--
Confidence 222 34444345699998743 3569999999987653 331 1200 000223444478899998420 0
Q ss_pred cccccccccccccccCCCCceEEecCCCCCCCCcceeEEE-EeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEE
Q 010034 202 IMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT-SGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK 280 (519)
Q Consensus 202 ~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 280 (519)
-+.+.++|+.+++....-..+..| +.++ ..++++|+......... ....-.+.++++|+.+.+..
T Consensus 151 -------~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~--~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 151 -------QNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGS--PYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp -------CCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTC--SSCBCCCEEEEEETTTTEEE
T ss_pred -------CCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCC--ccccCCceEEEEECCCCeEE
Confidence 145677899988766543222222 2223 34678887653221110 00001368999999988766
Q ss_pred EcccCCCCCCCCcceEEEEe--CCEEEEEcc
Q 010034 281 RLPIGNEPPPARAYHSMTCL--GSLYLLFGG 309 (519)
Q Consensus 281 ~v~~~~~~p~~R~~~~~v~~--~~~iyv~GG 309 (519)
..-.. |.......++.. ++.+|+..+
T Consensus 217 ~~~~~---~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 217 KQFKF---KLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEEEC---CTTCCCEEEEECTTSCEEEEESS
T ss_pred EEEec---CCCCCceeEEEecCCCEEEEEcc
Confidence 43222 112233445554 577888654
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.59 E-value=0.012 Score=57.84 Aligned_cols=207 Identities=6% Similarity=-0.132 Sum_probs=114.9
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~ 102 (519)
+.++...++++|+.... .+.+.++|+.+.+-...-..+.. ..... .-+.++..++++|+..- ...+
T Consensus 87 ~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~----~~~~~-~p~~i~~~~~~lyv~~~----~~~~ 152 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDM----DMESG-STEQMVQYGKYVYVNCW----SYQN 152 (328)
T ss_dssp EEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTC----CTTTC-BCCCEEEETTEEEEEEC----TTCC
T ss_pred cEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCc----cccCC-CcceEEEECCEEEEEcC----CCCC
Confidence 34444344689987743 36799999998865432111110 00000 11233447889999842 0124
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcC-----CCcEEEEECCCCcEEEeccCCCCCCc
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKW-----LSDVYVLDTISLEWMQLPVTGSVPPP 177 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~-----~~~v~~yd~~t~~W~~l~~~~~~p~~ 177 (519)
.+.++|+.+++....-..+..| +.++...++++|+....+.... .+.++++|+.+.+....- ..+..
T Consensus 153 ~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~---~~~~g 224 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF---KFKLG 224 (328)
T ss_dssp EEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE---ECCTT
T ss_pred EEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE---ecCCC
Confidence 6999999998876543322222 3444556678888753221111 367999999999876432 22222
Q ss_pred ccCeeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCC-CcceeEEEE--eCCEEEEEec
Q 010034 178 RCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPS-SRCGHTITS--GGHYLLLFGG 252 (519)
Q Consensus 178 r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~-~r~~~s~~~--~~~~iyv~GG 252 (519)
..-..++.. ++.+|+..+ .++.+|+.+.+..... ..+. ...-.++++ .++.+|+...
T Consensus 225 ~~p~~la~~~d~~~lyv~~~---------------~v~~~d~~t~~~~~~~---~~~~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN---------------DIWRMPVEADRVPVRP---FLEFRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS---------------SEEEEETTCSSCCSSC---SBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred CCceeEEEecCCCEEEEEcc---------------EEEEEECCCCceeeee---eecCCCCceEEEEEcCCCCeEEEEcc
Confidence 223445554 468888643 3445688777653211 1121 233344555 4788999863
Q ss_pred cCCCCCcccccceeCcEEEEEcCCC
Q 010034 253 HGTGGWLSRYDIYYNDTIILDRLSA 277 (519)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~t~ 277 (519)
.+.. ..+.|.+||++..
T Consensus 287 ~~y~--------~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 287 IDYQ--------QQGIVYRYSPQGK 303 (328)
T ss_dssp TTSS--------SEEEEEEECTTCC
T ss_pred cccc--------cCCEEEEECCCCC
Confidence 2110 2467999998843
No 22
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.46 E-value=0.017 Score=54.99 Aligned_cols=188 Identities=12% Similarity=-0.011 Sum_probs=113.7
Q ss_pred eeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEE
Q 010034 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (519)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (519)
-......++.+|+-.|..+. +.+.++|++|++=..-. +++..-++.+.+..++ +||+....+ +.+++|
T Consensus 45 tqGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~---~l~~~~FgeGit~~g~-~ly~ltw~~-----~~v~v~ 112 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQI---ELGKRYFGEGISDWKD-KIVGLTWKN-----GLGFVW 112 (262)
T ss_dssp EEEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEE---ECCTTCCEEEEEEETT-EEEEEESSS-----SEEEEE
T ss_pred cceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEE---ecCCccceeEEEEeCC-EEEEEEeeC-----CEEEEE
Confidence 35555668899999997653 45899999999765444 2554444455566655 999986543 559999
Q ss_pred ECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-ecCCC-CCCCCcc
Q 010034 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPG-QAPSSRC 236 (519)
Q Consensus 159 d~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~-i~~~g-~~P~~r~ 236 (519)
|+.|.+-..- .+.+-.+.+++..+++||+.-|. +.+..+|+.+.+-.. +.+.. ..|....
T Consensus 113 D~~t~~~~~t-----i~~~~eG~glt~dg~~L~~SdGs-------------~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 113 NIRNLRQVRS-----FNYDGEGWGLTHNDQYLIMSDGT-------------PVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp ETTTCCEEEE-----EECSSCCCCEEECSSCEEECCSS-------------SEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred ECccCcEEEE-----EECCCCceEEecCCCEEEEECCC-------------CeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 9998874432 22233566677667788887552 345667999866543 33210 1121111
Q ss_pred eeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCC--------CCCCCcceEEEEe--CCEEEE
Q 010034 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNE--------PPPARAYHSMTCL--GSLYLL 306 (519)
Q Consensus 237 ~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~--------~p~~R~~~~~v~~--~~~iyv 306 (519)
. -+...+++||+--- ..++|.+.|+.+.+-...-.... .+..-.-.+++.. ++++||
T Consensus 175 N-ELe~~~G~lyan~w------------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 175 N-ELEWVDGEIFANVW------------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp E-EEEEETTEEEEEET------------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred c-eeEEECCEEEEEEc------------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 1 23345888886321 34789999999877544322211 0111223555555 478999
Q ss_pred Ecc
Q 010034 307 FGG 309 (519)
Q Consensus 307 ~GG 309 (519)
.|-
T Consensus 242 TGK 244 (262)
T 3nol_A 242 TGK 244 (262)
T ss_dssp EET
T ss_pred ECC
Confidence 884
No 23
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.38 E-value=0.012 Score=65.41 Aligned_cols=227 Identities=9% Similarity=0.022 Sum_probs=127.3
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEE
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~ 106 (519)
..++.|++ |... .-+++||+.+++++..... ..+. ..-.+++.. ++.|++-.. .-+++
T Consensus 415 d~~g~lWi-gt~~-----~Gl~~~~~~~~~~~~~~~~-------~~~~-~~v~~i~~d~~g~lwigt~-------~Gl~~ 473 (781)
T 3v9f_A 415 DSEGNLWF-GTYL-----GNISYYNTRLKKFQIIELE-------KNEL-LDVRVFYEDKNKKIWIGTH-------AGVFV 473 (781)
T ss_dssp CTTSCEEE-EETT-----EEEEEECSSSCEEEECCST-------TTCC-CCEEEEEECTTSEEEEEET-------TEEEE
T ss_pred CCCCCEEE-Eecc-----CCEEEEcCCCCcEEEeccC-------CCCC-CeEEEEEECCCCCEEEEEC-------CceEE
Confidence 34466666 3221 3488999999888776421 0111 222333333 467776432 24899
Q ss_pred EECCCCeEEEEeeCC--CCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEE
Q 010034 107 LDTDIWQWSELTSFG--DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTAT 184 (519)
Q Consensus 107 yd~~t~~W~~~~~~g--~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~ 184 (519)
||+.+++|....... .++. ..-.+++...++.|++-. . ...+++||+.+.+++.+.....+|.... .+++
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~~-~~i~~i~~d~~g~lWigt-~-----~~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~ 545 (781)
T 3v9f_A 474 IDLASKKVIHHYDTSNSQLLE-NFVRSIAQDSEGRFWIGT-F-----GGGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIY 545 (781)
T ss_dssp EESSSSSCCEEECTTTSSCSC-SCEEEEEECTTCCEEEEE-S-----SSCEEEECTTCCEEEEECTTTTCSCSCE-EEEE
T ss_pred EeCCCCeEEecccCccccccc-ceeEEEEEcCCCCEEEEE-c-----CCCEEEEeCCCCeEEEccCCCCCCCCee-EEEE
Confidence 999999988776321 1111 122333444566787743 2 1349999999999998863222322221 1222
Q ss_pred Ee-CCEEEEEcccCCCCCccccccccccc-ccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCccc
Q 010034 185 MV-EKRLLIYGGRGGGGPIMGDLWALKGL-IEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSR 261 (519)
Q Consensus 185 ~~-~~~lyv~GG~~~~~~~~~d~~~l~~v-~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~ 261 (519)
.. ++.|++-.. +.+ .+||+.+++++.......+|..... +++. .++.|++.+.
T Consensus 546 ~d~~g~lWi~T~--------------~Glv~~~d~~~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lW~~t~--------- 601 (781)
T 3v9f_A 546 RSSKGQMWLATG--------------EGLVCFPSARNFDYQVFQRKEGLPNTHIR-AISEDKNGNIWASTN--------- 601 (781)
T ss_dssp ECTTSCEEEEET--------------TEEEEESCTTTCCCEEECGGGTCSCCCCC-EEEECSSSCEEEECS---------
T ss_pred ECCCCCEEEEEC--------------CCceEEECCCCCcEEEccccCCCCCceEE-EEEECCCCCEEEEcC---------
Confidence 22 567777432 223 6689999888877543345544442 4433 4677887542
Q ss_pred ccceeCcEEEEEcCCCeEEEcccCCCCCCCCcce-EEEEeCCEEEEEccCCC
Q 010034 262 YDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYH-SMTCLGSLYLLFGGFDG 312 (519)
Q Consensus 262 ~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~-~~v~~~~~iyv~GG~~~ 312 (519)
+.+.+||+.+.++.........+...+.. +++...+--+.|||.+|
T Consensus 602 -----~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G 648 (781)
T 3v9f_A 602 -----TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSING 648 (781)
T ss_dssp -----SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETTE
T ss_pred -----CceEEEECCCCceEEecccCCccccccccCceEECCCCEEEEECCCc
Confidence 34789999999988876543334444433 33333344455577655
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.27 E-value=0.072 Score=50.12 Aligned_cols=190 Identities=15% Similarity=0.044 Sum_probs=113.9
Q ss_pred cceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcC
Q 010034 21 SGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRR 100 (519)
Q Consensus 21 ~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~ 100 (519)
+-+.....+ +.+|+-.|..+ .+.+.++|+.+++=..-. ++|..-.+.+++..+++||+....+
T Consensus 22 ftqGL~~~~-~~LyestG~~g---~S~v~~vD~~tgkv~~~~---------~l~~~~fgeGi~~~~~~ly~ltw~~---- 84 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETG---RSSVRKVDLETGRILQRA---------EVPPPYFGAGIVAWRDRLIQLTWRN---- 84 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTT---SCEEEEEETTTCCEEEEE---------ECCTTCCEEEEEEETTEEEEEESSS----
T ss_pred ccccEEEEC-CEEEEECCCCC---CceEEEEECCCCCEEEEE---------eCCCCcceeEEEEeCCEEEEEEeeC----
Confidence 334555455 79999998654 356889999998754432 2455556778888999999985433
Q ss_pred CCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccC
Q 010034 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (519)
Q Consensus 101 ~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~ 180 (519)
+.+++||+.+.+-..-- |.+..+.+++..+ +++|+-=| .+.++.+|+.|.+-..--.-+..+.+...
T Consensus 85 -~~v~v~D~~tl~~~~ti-----~~~~~Gwglt~dg-~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 85 -HEGFVYDLATLTPRARF-----RYPGEGWALTSDD-SHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp -SEEEEEETTTTEEEEEE-----ECSSCCCEEEECS-SCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred -CEEEEEECCcCcEEEEE-----eCCCCceEEeeCC-CEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 56999999987654322 2233456666544 47888644 35699999999764432211122223221
Q ss_pred -eeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEe-cCCCCC--------CCCcceeEEEE--eCCEEE
Q 010034 181 -HTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL-KLPGQA--------PSSRCGHTITS--GGHYLL 248 (519)
Q Consensus 181 -~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i-~~~g~~--------P~~r~~~s~~~--~~~~iy 248 (519)
-.+...+++||+-- |.-+.+.+-|+.+++-... ...+-. |..-.--+.+. .++++|
T Consensus 152 lNeLe~~~G~lyanv------------w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 152 LNELEWVNGELLANV------------WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp EEEEEEETTEEEEEE------------TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred ceeeEEeCCEEEEEE------------CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 23445588888532 2235666779999876543 221111 11112223333 467899
Q ss_pred EEec
Q 010034 249 LFGG 252 (519)
Q Consensus 249 v~GG 252 (519)
|.|-
T Consensus 220 VTGK 223 (243)
T 3mbr_X 220 VTGK 223 (243)
T ss_dssp EEET
T ss_pred EECC
Confidence 9883
No 25
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.26 E-value=0.021 Score=63.44 Aligned_cols=232 Identities=8% Similarity=0.027 Sum_probs=126.4
Q ss_pred EEEEECCcE-EEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCC
Q 010034 24 SAVNIGKSK-VVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (519)
Q Consensus 24 ~~~~~~~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~ 101 (519)
+++...++. |++ |..+ .-+++||+.++++....... +..+.. .-.+++.. ++.|++-..
T Consensus 410 ~i~~d~~g~~lWi-gt~~-----~Gl~~~d~~~~~~~~~~~~~-----~~l~~~-~v~~i~~d~~g~lwigt~------- 470 (795)
T 4a2l_A 410 AVYVDEKKSLVYI-GTHA-----GGLSILHRNSGQVENFNQRN-----SQLVNE-NVYAILPDGEGNLWLGTL------- 470 (795)
T ss_dssp EEEEETTTTEEEE-EETT-----TEEEEEETTTCCEEEECTTT-----SCCSCS-CEEEEEECSSSCEEEEES-------
T ss_pred EEEEcCCCCEEEE-EeCc-----CceeEEeCCCCcEEEeecCC-----CCcCCC-eeEEEEECCCCCEEEEec-------
Confidence 444445566 666 3221 23889999999887765321 112222 22333333 467776532
Q ss_pred CcEEEEECCCCeEEEEeeCC---CCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcc
Q 010034 102 GDFWVLDTDIWQWSELTSFG---DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR 178 (519)
Q Consensus 102 ~dv~~yd~~t~~W~~~~~~g---~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r 178 (519)
+-+++||+.+++|....... .++.. .-.+.+...++.|++... ..+++||+.+.++ .+......+...
T Consensus 471 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~ 541 (795)
T 4a2l_A 471 SALVRFNPEQRSFTTIEKEKDGTPVVSK-QITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVT 541 (795)
T ss_dssp SCEEEEETTTTEEEECCBCTTCCBCCCC-CEEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGG
T ss_pred CceeEEeCCCCeEEEccccccccccCCc-eEEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCC
Confidence 23899999999998875321 11111 122333445667887542 3499999999988 543110111111
Q ss_pred cC--eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccC
Q 010034 179 CG--HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHG 254 (519)
Q Consensus 179 ~~--~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~ 254 (519)
.. .+++.. ++.|++-.. ..+.+||+.+++++.......+|.... .+++. .++.|++.+.
T Consensus 542 ~~~i~~i~~d~~g~lWigT~--------------~Gl~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-- 604 (795)
T 4a2l_A 542 KLFTNCIYEASNGIIWVGTR--------------EGFYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-- 604 (795)
T ss_dssp GSCEEEEEECTTSCEEEEES--------------SCEEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET--
T ss_pred CCeeEEEEECCCCCEEEEeC--------------CCceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC--
Confidence 11 122222 567777431 234567999998887754333554433 23333 3577887652
Q ss_pred CCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcc-eEEEEeCCEEEEEccCCC
Q 010034 255 TGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAY-HSMTCLGSLYLLFGGFDG 312 (519)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~-~~~v~~~~~iyv~GG~~~ 312 (519)
+.+.+||+.+.+++........+...+. .+++...+--+.|||.+|
T Consensus 605 ------------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G 651 (795)
T 4a2l_A 605 ------------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING 651 (795)
T ss_dssp ------------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE
T ss_pred ------------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCCc
Confidence 3478999999999876554333444443 233343333455566655
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.22 E-value=0.2 Score=49.65 Aligned_cols=209 Identities=15% Similarity=0.148 Sum_probs=113.1
Q ss_pred EEECCcEEEEEcCcCCCccCCcEEEEEcCCCc--EEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCc
Q 010034 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (519)
Q Consensus 26 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~d 103 (519)
..+.++.||+... ...++++|..+++ |+..... ......++.++.+|+..+ . ..
T Consensus 99 ~~~~~~~v~v~~~------~g~l~a~d~~tG~~~W~~~~~~------------~~~~~p~~~~~~v~v~~~-~-----g~ 154 (376)
T 3q7m_A 99 VTVSGGHVYIGSE------KAQVYALNTSDGTVAWQTKVAG------------EALSRPVVSDGLVLIHTS-N-----GQ 154 (376)
T ss_dssp EEEETTEEEEEET------TSEEEEEETTTCCEEEEEECSS------------CCCSCCEEETTEEEEECT-T-----SE
T ss_pred ceEeCCEEEEEcC------CCEEEEEECCCCCEEEEEeCCC------------ceEcCCEEECCEEEEEcC-C-----Ce
Confidence 3344578888543 1469999998764 7653210 011222455778877543 1 35
Q ss_pred EEEEECCCCe--EEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEeccCCCCCCcc-
Q 010034 104 FWVLDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSVPPPR- 178 (519)
Q Consensus 104 v~~yd~~t~~--W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~~~~~p~~r- 178 (519)
++.||+.+++ |+.-... +....+...+.++. ++.+|+ |..+ ..++.||+.+.+ |+.-. ..|...
T Consensus 155 l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~-~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~---~~~~~~~ 223 (376)
T 3q7m_A 155 LQALNEADGAVKWTVNLDM-PSLSLRGESAPTTA-FGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRI---SQATGST 223 (376)
T ss_dssp EEEEETTTCCEEEEEECCC------CCCCCCEEE-TTEEEE-CCTT-----TEEEEEETTTCCEEEEEEC---CC-----
T ss_pred EEEEECCCCcEEEEEeCCC-CceeecCCCCcEEE-CCEEEE-EcCC-----CEEEEEECCCCcEEEEEec---ccCCCCc
Confidence 9999998875 8765421 11111112233333 457766 3322 358999988764 76543 111111
Q ss_pred -------cCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCC--ceEEecCCCCCCCCcceeEEEEeCCEEEE
Q 010034 179 -------CGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP--GWTQLKLPGQAPSSRCGHTITSGGHYLLL 249 (519)
Q Consensus 179 -------~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~--~W~~i~~~g~~P~~r~~~s~~~~~~~iyv 249 (519)
.....+..++.+|+.+.. ..+..+|+.++ .|+... +. ..+.++.++.+|+
T Consensus 224 ~~~~~~~~~~~p~~~~~~v~~~~~~-------------g~l~~~d~~tG~~~w~~~~-----~~---~~~~~~~~~~l~~ 282 (376)
T 3q7m_A 224 EIDRLSDVDTTPVVVNGVVFALAYN-------------GNLTALDLRSGQIMWKREL-----GS---VNDFIVDGNRIYL 282 (376)
T ss_dssp ------CCCCCCEEETTEEEEECTT-------------SCEEEEETTTCCEEEEECC-----CC---EEEEEEETTEEEE
T ss_pred ccccccccCCCcEEECCEEEEEecC-------------cEEEEEECCCCcEEeeccC-----CC---CCCceEECCEEEE
Confidence 223334557888886421 23455677665 465432 11 2345567888888
Q ss_pred EeccCCCCCcccccceeCcEEEEEcCCCe--EEEcccCCCCCCCCcceEEEEeCCEEEEEc
Q 010034 250 FGGHGTGGWLSRYDIYYNDTIILDRLSAQ--WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (519)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~v~~~~~~p~~R~~~~~v~~~~~iyv~G 308 (519)
... ...+++||+.+.+ |+.-.. ..+...+.+..++.+|+..
T Consensus 283 ~~~-------------~g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~~~~l~v~~ 325 (376)
T 3q7m_A 283 VDQ-------------NDRVMALTIDGGVTLWTQSDL-----LHRLLTSPVLYNGNLVVGD 325 (376)
T ss_dssp EET-------------TCCEEEEETTTCCEEEEECTT-----TTSCCCCCEEETTEEEEEC
T ss_pred EcC-------------CCeEEEEECCCCcEEEeeccc-----CCCcccCCEEECCEEEEEe
Confidence 653 1358999987654 765311 1223334455678888754
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.08 E-value=0.22 Score=47.63 Aligned_cols=224 Identities=8% Similarity=0.017 Sum_probs=112.3
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++..++.|+.+ ..+.++|..+.+....-. + .. ..-.+++.. ++++++.|+.++ .+.+|
T Consensus 33 ~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~-~--------h~-~~v~~~~~~~~~~~l~s~~~d~-----~i~vw 92 (312)
T 4ery_A 33 PNGEWLASSSAD-----KLIKIWGAYDGKFEKTIS-G--------HK-LGISDVAWSSDSNLLVSASDDK-----TLKIW 92 (312)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTCCEEEEEC-C--------CS-SCEEEEEECTTSSEEEEEETTS-----EEEEE
T ss_pred CCCCEEEEeeCC-----CeEEEEeCCCcccchhhc-c--------CC-CceEEEEEcCCCCEEEEECCCC-----EEEEE
Confidence 445666777654 347788988877654321 0 11 112233333 567777777653 58899
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~- 186 (519)
|+.+.+-...-. .... .-.+++...++.+++.|+.++. +..||+.+.+-...- +........+.+
T Consensus 93 d~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~l~s~~~d~~-----i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~ 158 (312)
T 4ery_A 93 DVSSGKCLKTLK---GHSN-YVFCCNFNPQSNLIVSGSFDES-----VRIWDVKTGKCLKTL-----PAHSDPVSAVHFN 158 (312)
T ss_dssp ETTTCCEEEEEE---CCSS-CEEEEEECSSSSEEEEEETTSC-----EEEEETTTCCEEEEE-----CCCSSCEEEEEEC
T ss_pred ECCCCcEEEEEc---CCCC-CEEEEEEcCCCCEEEEEeCCCc-----EEEEECCCCEEEEEe-----cCCCCcEEEEEEc
Confidence 998876433221 1111 1122333345567777876653 889999887644322 111111222222
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccce
Q 010034 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (519)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~ 265 (519)
++.+++.|+.+ ..+..||..+.+-...-.. ...+.....+...++..++.|+.+
T Consensus 159 ~~~~~l~~~~~d------------~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d----------- 213 (312)
T 4ery_A 159 RDGSLIVSSSYD------------GLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAATLD----------- 213 (312)
T ss_dssp TTSSEEEEEETT------------SCEEEEETTTCCEEEEECC--SSCCCEEEEEECTTSSEEEEEETT-----------
T ss_pred CCCCEEEEEeCC------------CcEEEEECCCCceeeEEec--cCCCceEEEEECCCCCEEEEEcCC-----------
Confidence 45667777653 2345567776654332211 111111212222455666666533
Q ss_pred eCcEEEEEcCCCeEEEcccCCCCCCCCcceEEE-EeCCEEEEEccCCCC
Q 010034 266 YNDTIILDRLSAQWKRLPIGNEPPPARAYHSMT-CLGSLYLLFGGFDGK 313 (519)
Q Consensus 266 ~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v-~~~~~iyv~GG~~~~ 313 (519)
+.+.+||+.+.+-...-.... .......... ..++.+++.|+.++.
T Consensus 214 -~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~ 260 (312)
T 4ery_A 214 -NTLKLWDYSKGKCLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSEDNL 260 (312)
T ss_dssp -TEEEEEETTTTEEEEEECSSC-CSSSCCCEEEECSSSCEEEECCTTSC
T ss_pred -CeEEEEECCCCcEEEEEEecC-CceEEEEEEEEeCCCcEEEEECCCCE
Confidence 457889988765433222111 1111111222 235778888887654
No 28
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.00 E-value=0.2 Score=48.95 Aligned_cols=112 Identities=12% Similarity=0.034 Sum_probs=64.5
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEE
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~ 106 (519)
..++.+++.|+.+ ..+.+||+.+.+|..+.... .... .-.+++.. +++.++.|+.++ .+.+
T Consensus 17 s~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~-------~h~~-~v~~~~~~~~~~~l~~~~~dg-----~i~v 78 (372)
T 1k8k_C 17 NKDRTQIAICPNN-----HEVHIYEKSGNKWVQVHELK-------EHNG-QVTGVDWAPDSNRIVTCGTDR-----NAYV 78 (372)
T ss_dssp CTTSSEEEEECSS-----SEEEEEEEETTEEEEEEEEE-------CCSS-CEEEEEEETTTTEEEEEETTS-----CEEE
T ss_pred CCCCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeec-------CCCC-cccEEEEeCCCCEEEEEcCCC-----eEEE
Confidence 3456677777653 46889999998776655331 1111 12233333 567777777543 4889
Q ss_pred EECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 107 yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
||..++++...... ......-.+++...++..++.|+.++. +..||+.+..
T Consensus 79 wd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~-----v~i~d~~~~~ 129 (372)
T 1k8k_C 79 WTLKGRTWKPTLVI--LRINRAARCVRWAPNEKKFAVGSGSRV-----ISICYFEQEN 129 (372)
T ss_dssp EEEETTEEEEEEEC--CCCSSCEEEEEECTTSSEEEEEETTSS-----EEEEEEETTT
T ss_pred EECCCCeeeeeEEe--ecCCCceeEEEECCCCCEEEEEeCCCE-----EEEEEecCCC
Confidence 99999887765421 111222233333455677777776543 6666666544
No 29
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.97 E-value=0.046 Score=52.10 Aligned_cols=185 Identities=9% Similarity=-0.015 Sum_probs=109.2
Q ss_pred eeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEE
Q 010034 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (519)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (519)
.+.....++.+|+..|..+. +.++|+++++=..-. ++..-++.+.+..+ ++||+....+ +.+++|
T Consensus 57 tqGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g-~~Ly~ltw~~-----~~v~V~ 121 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWME----RLGNIFAEGLASDG-ERLYQLTWTE-----GLLFTW 121 (268)
T ss_dssp EEEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEE----ECTTCCEEEEEECS-SCEEEEESSS-----CEEEEE
T ss_pred cceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE----CCCCcceeEEEEeC-CEEEEEEccC-----CEEEEE
Confidence 35666778999999987653 889999988643322 22333334455554 4999986543 459999
Q ss_pred ECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-ecCCCCCCCCcc-
Q 010034 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAPSSRC- 236 (519)
Q Consensus 159 d~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~-i~~~g~~P~~r~- 236 (519)
|+.|.+-..- .+.+-.+.+++..+++||+.-|. +.+..+|+.+.+-.. +.+. ..+.+..
T Consensus 122 D~~Tl~~~~t-----i~~~~eGwGLt~Dg~~L~vSdGs-------------~~l~~iDp~T~~v~~~I~V~-~~g~~v~~ 182 (268)
T 3nok_A 122 SGMPPQRERT-----TRYSGEGWGLCYWNGKLVRSDGG-------------TMLTFHEPDGFALVGAVQVK-LRGQPVEL 182 (268)
T ss_dssp ETTTTEEEEE-----EECSSCCCCEEEETTEEEEECSS-------------SEEEEECTTTCCEEEEEECE-ETTEECCC
T ss_pred ECCcCcEEEE-----EeCCCceeEEecCCCEEEEECCC-------------CEEEEEcCCCCeEEEEEEeC-CCCccccc
Confidence 9998765432 22233456777778899998652 455667999876554 3321 1121111
Q ss_pred eeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCC---------CCCCCCcceEEEEe--CCEEE
Q 010034 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGN---------EPPPARAYHSMTCL--GSLYL 305 (519)
Q Consensus 237 ~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~---------~~p~~R~~~~~v~~--~~~iy 305 (519)
---+...+++||+--- ..++|.+.|+.+.+-...-... ..+..-.-.+++.. ++++|
T Consensus 183 lNeLe~~dG~lyanvw------------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 183 INELECANGVIYANIW------------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp EEEEEEETTEEEEEET------------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred ccccEEeCCEEEEEEC------------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 1123345888886221 2478999999987644322211 01111123445544 47888
Q ss_pred EEcc
Q 010034 306 LFGG 309 (519)
Q Consensus 306 v~GG 309 (519)
|.|-
T Consensus 251 VTGK 254 (268)
T 3nok_A 251 MTGK 254 (268)
T ss_dssp EEET
T ss_pred EeCC
Confidence 8874
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.95 E-value=0.19 Score=47.94 Aligned_cols=190 Identities=9% Similarity=-0.038 Sum_probs=109.3
Q ss_pred eEEEEeC-CeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEE
Q 010034 80 HIAVAID-CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (519)
Q Consensus 80 h~~~~~~-~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (519)
+.+++.+ +.+|+..|..+. +.+.++|+.+++=...-+ ++...+..+.+..++ ++|+..-. .+.+++|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~---s~v~~iD~~tg~v~~~i~---l~~~~fgeGi~~~g~-~lyv~t~~-----~~~v~vi 91 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGR---SSVRQVALQTGKVENIHK---MDDSYFGEGLTLLNE-KLYQVVWL-----KNIGFIY 91 (266)
T ss_dssp EEEEECSTTEEEEEECSTTT---CEEEEEETTTCCEEEEEE---CCTTCCEEEEEEETT-EEEEEETT-----CSEEEEE
T ss_pred ccEEEeCCCeEEEECCCCCC---CEEEEEECCCCCEEEEEe---cCCCcceEEEEEeCC-EEEEEEec-----CCEEEEE
Confidence 6666665 799998774322 569999999997654432 444334445555654 99998643 3559999
Q ss_pred ECCCCcEEE-eccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-ecCCC-CCCCCc
Q 010034 159 DTISLEWMQ-LPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPG-QAPSSR 235 (519)
Q Consensus 159 d~~t~~W~~-l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~-i~~~g-~~P~~r 235 (519)
|+.|.+=.. ++ .+ . -.+.+++.-++++|+.-|. +.+...|+.+.+-.. +.+.. ..|..+
T Consensus 92 D~~t~~v~~~i~-~g-~---~~g~glt~Dg~~l~vs~gs-------------~~l~viD~~t~~v~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 92 DRRTLSNIKNFT-HQ-M---KDGWGLATDGKILYGSDGT-------------SILYEIDPHTFKLIKKHNVKYNGHRVIR 153 (266)
T ss_dssp ETTTTEEEEEEE-CC-S---SSCCEEEECSSSEEEECSS-------------SEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred ECCCCcEEEEEE-CC-C---CCeEEEEECCCEEEEECCC-------------CeEEEEECCCCcEEEEEEECCCCccccc
Confidence 999875332 22 11 1 2344455556789987541 445667998866443 33211 112212
Q ss_pred ceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEE---EcccC------CCCCCCCcceEEEEe--CCEE
Q 010034 236 CGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK---RLPIG------NEPPPARAYHSMTCL--GSLY 304 (519)
Q Consensus 236 ~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~---~v~~~------~~~p~~R~~~~~v~~--~~~i 304 (519)
-. .+...++++|+--. ..++|.+.|+.+.+-. .++.. ...+..-.-.+++.. ++++
T Consensus 154 ~n-ele~~dg~lyvn~~------------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l 220 (266)
T 2iwa_A 154 LN-ELEYINGEVWANIW------------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI 220 (266)
T ss_dssp EE-EEEEETTEEEEEET------------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred ce-eEEEECCEEEEecC------------CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence 22 23334788887432 2478999999887543 33211 000111122455555 4689
Q ss_pred EEEccCCC
Q 010034 305 LLFGGFDG 312 (519)
Q Consensus 305 yv~GG~~~ 312 (519)
||.|+..+
T Consensus 221 fVTgk~~~ 228 (266)
T 2iwa_A 221 FVTGKLWP 228 (266)
T ss_dssp EEEETTCS
T ss_pred EEECCCCC
Confidence 99987543
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.93 E-value=0.3 Score=46.60 Aligned_cols=202 Identities=7% Similarity=-0.065 Sum_probs=115.0
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~ 102 (519)
|.+....++.+|+..|..+ .+.+.++|+.+++=..-- +.+....+..++..++++|+..-. .+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i---------~l~~~~fgeGi~~~g~~lyv~t~~-----~~ 86 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIH---------KMDDSYFGEGLTLLNEKLYQVVWL-----KN 86 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEE---------ECCTTCCEEEEEEETTEEEEEETT-----CS
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEE---------ecCCCcceEEEEEeCCEEEEEEec-----CC
Confidence 5666556589999877422 367999999998754422 123333456777788999999542 25
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCccc-Ce
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRC-GH 181 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~-~~ 181 (519)
.+++||+.+.+=..--+.+ +| .+.+.+. .++++|+.-| .+.++.+|+.|.+-..--.-+..+.+.. -.
T Consensus 87 ~v~viD~~t~~v~~~i~~g-~~---~g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ-MK---DGWGLAT-DGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp EEEEEETTTTEEEEEEECC-SS---SCCEEEE-CSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred EEEEEECCCCcEEEEEECC-CC---CeEEEEE-CCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccce
Confidence 6999999987543222111 22 2333343 3447887643 3679999999976433221112222221 12
Q ss_pred eEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEe-cCCCC--------CCCCcceeEEEE--eCCEEEEE
Q 010034 182 TATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL-KLPGQ--------APSSRCGHTITS--GGHYLLLF 250 (519)
Q Consensus 182 ~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i-~~~g~--------~P~~r~~~s~~~--~~~~iyv~ 250 (519)
.+...++++|+--.. -+.+.+-|+.+++-... ...+. .|..-.-.+.+. .++++||.
T Consensus 156 ele~~dg~lyvn~~~------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 156 ELEYINGEVWANIWQ------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp EEEEETTEEEEEETT------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred eEEEECCEEEEecCC------------CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 344447888865321 24555669988865433 21110 111112234443 45689998
Q ss_pred eccCCCCCcccccceeCcEEEEEcCC
Q 010034 251 GGHGTGGWLSRYDIYYNDTIILDRLS 276 (519)
Q Consensus 251 GG~~~~~~~~~~~~~~~~v~~yd~~t 276 (519)
|+. .+.+++.++..
T Consensus 224 gk~------------~~~v~~i~l~~ 237 (266)
T 2iwa_A 224 GKL------------WPKLFEIKLHL 237 (266)
T ss_dssp ETT------------CSEEEEEEEEE
T ss_pred CCC------------CCeEEEEEEec
Confidence 874 35677777654
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.90 E-value=0.14 Score=50.80 Aligned_cols=187 Identities=12% Similarity=0.038 Sum_probs=103.8
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CC-eEEEEccccCCcCCCcEEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~dv~~yd 108 (519)
+.+|+.|+.+ +.+.++|+.+++-...-.. .. .-.+++.. ++ .+|+.|+.+ ..+.++|
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~---------~~--~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d 60 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPV---------GS--NPMGAVISPDGTKVYVANAHS-----NDVSIID 60 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEEC---------SS--SEEEEEECTTSSEEEEEEGGG-----TEEEEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeec---------CC--CcceEEECCCCCEEEEECCCC-----CeEEEEE
Confidence 4678887754 4588999988765433211 11 12333333 33 577776644 3689999
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~- 186 (519)
+.+++....-. .+. .-.+++...++ .+|+.|..+ ..+.+||+.+++-..... . ...-..++..
T Consensus 61 ~~~~~~~~~~~---~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~---~--~~~~~~~~~s~ 125 (391)
T 1l0q_A 61 TATNNVIATVP---AGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVK---T--GKSPLGLALSP 125 (391)
T ss_dssp TTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEE---C--SSSEEEEEECT
T ss_pred CCCCeEEEEEE---CCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEe---C--CCCcceEEECC
Confidence 99987655442 222 22334443333 566665433 359999999987655431 1 1111333333
Q ss_pred C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCccccc
Q 010034 187 E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYD 263 (519)
Q Consensus 187 ~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~ 263 (519)
+ +.+|+.++.. ..+..+|+.+.+....-..+. .-..++. .+..+|+.++.+
T Consensus 126 dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~~--------- 179 (391)
T 1l0q_A 126 DGKKLYVTNNGD------------KTVSVINTVTKAVINTVSVGR-----SPKGIAVTPDGTKVYVANFDS--------- 179 (391)
T ss_dssp TSSEEEEEETTT------------TEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTT---------
T ss_pred CCCEEEEEeCCC------------CEEEEEECCCCcEEEEEecCC-----CcceEEECCCCCEEEEEeCCC---------
Confidence 3 3677776432 346667888877655432111 1123333 344676766432
Q ss_pred ceeCcEEEEEcCCCeEEEc
Q 010034 264 IYYNDTIILDRLSAQWKRL 282 (519)
Q Consensus 264 ~~~~~v~~yd~~t~~W~~v 282 (519)
+.+.++|+.+.+....
T Consensus 180 ---~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 180 ---MSISVIDTVTNSVIDT 195 (391)
T ss_dssp ---TEEEEEETTTTEEEEE
T ss_pred ---CEEEEEECCCCeEEEE
Confidence 4589999988765443
No 33
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.89 E-value=0.39 Score=47.49 Aligned_cols=196 Identities=10% Similarity=0.019 Sum_probs=104.6
Q ss_pred CcEEEEEcCCCc--EEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCC--eEEEEeeCC
Q 010034 46 SDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW--QWSELTSFG 121 (519)
Q Consensus 46 ~~~~~yd~~~~~--W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~--~W~~~~~~g 121 (519)
..++.||+.+++ |+..... +....+...+.+..++.+|+ |..+ ..++.+|+.++ .|+.-..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~-------~~~~~~~~~~~~~~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~-- 217 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDM-------PSLSLRGESAPTTAFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRIS-- 217 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC------------CCCCCCEEETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECC--
T ss_pred CeEEEEECCCCcEEEEEeCCC-------CceeecCCCCcEEECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecc--
Confidence 368999998775 8764311 11111222334455777766 3322 35899999876 4765431
Q ss_pred CCCCCC--------CccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEeccCCCCCCcccCeeEEEeCCEEE
Q 010034 122 DLPSPR--------DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLL 191 (519)
Q Consensus 122 ~~P~~r--------~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~~~~~p~~r~~~~~~~~~~~ly 191 (519)
.|... .....+.. ++.+|+.+. ...++.+|+.+.+ |+.-. +. ....+..++.+|
T Consensus 218 -~~~~~~~~~~~~~~~~~p~~~-~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~-----~~---~~~~~~~~~~l~ 281 (376)
T 3q7m_A 218 -QATGSTEIDRLSDVDTTPVVV-NGVVFALAY------NGNLTALDLRSGQIMWKREL-----GS---VNDFIVDGNRIY 281 (376)
T ss_dssp -C-----------CCCCCCEEE-TTEEEEECT------TSCEEEEETTTCCEEEEECC-----CC---EEEEEEETTEEE
T ss_pred -cCCCCcccccccccCCCcEEE-CCEEEEEec------CcEEEEEECCCCcEEeeccC-----CC---CCCceEECCEEE
Confidence 12111 11222333 458887642 2358999998774 76532 11 123455588998
Q ss_pred EEcccCCCCCcccccccccccccccCCCCc--eEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcE
Q 010034 192 IYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (519)
Q Consensus 192 v~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~--W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v 269 (519)
+.... ..+..+|+.+++ |+.... + .+...+.++.++.||+... ...+
T Consensus 282 ~~~~~-------------g~l~~~d~~tG~~~w~~~~~----~-~~~~~~~~~~~~~l~v~~~-------------~g~l 330 (376)
T 3q7m_A 282 LVDQN-------------DRVMALTIDGGVTLWTQSDL----L-HRLLTSPVLYNGNLVVGDS-------------EGYL 330 (376)
T ss_dssp EEETT-------------CCEEEEETTTCCEEEEECTT----T-TSCCCCCEEETTEEEEECT-------------TSEE
T ss_pred EEcCC-------------CeEEEEECCCCcEEEeeccc----C-CCcccCCEEECCEEEEEeC-------------CCeE
Confidence 87531 235566877665 665421 1 1122234456788887532 1358
Q ss_pred EEEEcCCCe--EEEcccCCCCCCCCcceEEEEeCCEEEEEc
Q 010034 270 IILDRLSAQ--WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (519)
Q Consensus 270 ~~yd~~t~~--W~~v~~~~~~p~~R~~~~~v~~~~~iyv~G 308 (519)
++||+.+.+ |+.-.. ........+..++.+|+..
T Consensus 331 ~~~d~~tG~~~~~~~~~-----~~~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 331 HWINVEDGRFVAQQKVD-----SSGFQTEPVAADGKLLIQA 366 (376)
T ss_dssp EEEETTTCCEEEEEECC-----TTCBCSCCEEETTEEEEEB
T ss_pred EEEECCCCcEEEEEecC-----CCcceeCCEEECCEEEEEe
Confidence 999988765 543221 1223334455688888754
No 34
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.86 E-value=0.094 Score=49.85 Aligned_cols=187 Identities=14% Similarity=0.023 Sum_probs=109.0
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~ 102 (519)
+..... ++.||+-.|..+ .+.+.++|+.+++=..-- +++..-.+..++..+++||+....+ +
T Consensus 46 qGL~~~-~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~---------~l~~~~FgeGit~~g~~ly~ltw~~-----~ 107 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNG---RSSIRKVDIESGKTLQQI---------ELGKRYFGEGISDWKDKIVGLTWKN-----G 107 (262)
T ss_dssp EEEEEE-TTEEEEEEEETT---EEEEEEECTTTCCEEEEE---------ECCTTCCEEEEEEETTEEEEEESSS-----S
T ss_pred ceEEEE-CCEEEEECCCCC---CceEEEEECCCCcEEEEE---------ecCCccceeEEEEeCCEEEEEEeeC-----C
Confidence 444444 579999888644 246889999998754432 2333345667788899999995433 5
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEE-eccCCCCCCcccC-
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-LPVTGSVPPPRCG- 180 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-l~~~~~~p~~r~~- 180 (519)
.+++||+.+.+-..-- +.+-.+.+.+..+ +.+|+.-| .+.++.+|+.|.+-.. +.+. ..+.+...
T Consensus 108 ~v~v~D~~t~~~~~ti-----~~~~eG~glt~dg-~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~-~~g~~~~~l 174 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSF-----NYDGEGWGLTHND-QYLIMSDG------TPVLRFLDPESLTPVRTITVT-AHGEELPEL 174 (262)
T ss_dssp EEEEEETTTCCEEEEE-----ECSSCCCCEEECS-SCEEECCS------SSEEEEECTTTCSEEEEEECE-ETTEECCCE
T ss_pred EEEEEECccCcEEEEE-----ECCCCceEEecCC-CEEEEECC------CCeEEEEcCCCCeEEEEEEec-cCCcccccc
Confidence 6999999987654322 2222445555443 47887643 3569999999876443 3321 11122111
Q ss_pred eeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEe-cCCCCCC-------CCcceeEEEE--eCCEEEEE
Q 010034 181 HTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL-KLPGQAP-------SSRCGHTITS--GGHYLLLF 250 (519)
Q Consensus 181 ~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i-~~~g~~P-------~~r~~~s~~~--~~~~iyv~ 250 (519)
-.+...+++||+-- |.-+.+.+-|+.+++-... ...+-.| ..-.-.+.+. .++++||.
T Consensus 175 NELe~~~G~lyan~------------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 175 NELEWVDGEIFANV------------WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp EEEEEETTEEEEEE------------TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred ceeEEECCEEEEEE------------ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 12444588888632 1225666779999886543 2221111 1112233444 46789998
Q ss_pred ec
Q 010034 251 GG 252 (519)
Q Consensus 251 GG 252 (519)
|-
T Consensus 243 GK 244 (262)
T 3nol_A 243 GK 244 (262)
T ss_dssp ET
T ss_pred CC
Confidence 84
No 35
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.84 E-value=0.14 Score=51.22 Aligned_cols=212 Identities=16% Similarity=0.038 Sum_probs=103.4
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~ 125 (519)
..+.+||+.+.+....-. .... .-.++..++++++.|+.++ .+.++|+.+..-...... ..
T Consensus 156 g~i~iwd~~~~~~~~~~~---------~~~~--~v~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~--~~- 216 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMA---------GHQA--RVGCLSWNRHVLSSGSRSG-----AIHHHDVRIANHQIGTLQ--GH- 216 (401)
T ss_dssp SCEEEEETTTCCEEEEEC---------CCSS--CEEEEEEETTEEEEEETTS-----EEEEEETTSSSCEEEEEE--CC-
T ss_pred CeEEEEECcCCeEEEEec---------CCCC--ceEEEEECCCEEEEEcCCC-----CEEEEecccCcceeeEEc--CC-
Confidence 357778887765433211 1111 1222333566777777553 588899874322111110 11
Q ss_pred CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe--CCEEEEEcccCCCCCcc
Q 010034 126 PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIM 203 (519)
Q Consensus 126 ~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~ 203 (519)
...-.+++...++.+++.|+.++ .+..||+.+.+-...-. . ....-.++... ++.+++.||.+.+
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~--~--~~~~v~~~~~~p~~~~ll~~~~gs~d---- 283 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKT--N--HNAAVKAVAWCPWQSNLLATGGGTMD---- 283 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEEC--C--CSSCCCEEEECTTSTTEEEEECCTTT----
T ss_pred CCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEec--C--CcceEEEEEECCCCCCEEEEecCCCC----
Confidence 11122333344567788887654 48899998765443220 1 11111233333 3467777652221
Q ss_pred cccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEE
Q 010034 204 GDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (519)
Q Consensus 204 ~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~ 281 (519)
..+..||..+.+-...- ...... .+++. .+..+++.+|... +.+.+||..+.....
T Consensus 284 ------~~i~i~d~~~~~~~~~~---~~~~~v--~~~~~s~~~~~l~~~~g~~d-----------g~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 284 ------KQIHFWNAATGARVNTV---DAGSQV--TSLIWSPHSKEIMSTHGFPD-----------NNLSIWSYSSSGLTK 341 (401)
T ss_dssp ------CEEEEEETTTCCEEEEE---ECSSCE--EEEEECSSSSEEEEEECTTT-----------CEEEEEEEETTEEEE
T ss_pred ------CEEEEEECCCCCEEEEE---eCCCcE--EEEEECCCCCeEEEEeecCC-----------CcEEEEecCCcccee
Confidence 33556777766544332 111111 12222 3345555545432 458888988877665
Q ss_pred cccCCCCCCCCcceEEEEeCCEEEEEccCCC
Q 010034 282 LPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (519)
Q Consensus 282 v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~ 312 (519)
+..... ...+.......-++.+++.||.++
T Consensus 342 ~~~~~~-h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 342 QVDIPA-HDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp EEEEEC-CSSCCCEEEECTTSSEEEEECTTS
T ss_pred EEEecC-CCCCEEEEEECCCCCEEEEEeCCC
Confidence 533211 112222222233577778887665
No 36
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.77 E-value=0.25 Score=47.24 Aligned_cols=219 Identities=13% Similarity=0.011 Sum_probs=111.8
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++..++.|+.+ ..+.+||+.+.+........ .... .-.+++.. +++.++.|+.++ .+.+|
T Consensus 107 ~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~-------~~~~-~i~~~~~~~~~~~l~~~~~dg-----~v~~~ 168 (337)
T 1gxr_A 107 PDGCTLIVGGEA-----STLSIWDLAAPTPRIKAELT-------SSAP-ACYALAISPDSKVCFSCCSDG-----NIAVW 168 (337)
T ss_dssp TTSSEEEEEESS-----SEEEEEECCCC--EEEEEEE-------CSSS-CEEEEEECTTSSEEEEEETTS-----CEEEE
T ss_pred CCCCEEEEEcCC-----CcEEEEECCCCCcceeeecc-------cCCC-ceEEEEECCCCCEEEEEeCCC-----cEEEE
Confidence 345566666543 46888999888754433221 1111 12233333 556777777553 48999
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~- 186 (519)
|+.+.+....-. .+.. .-.+++...++..++.|+.++ .+..||+.+.+-.... ..+.+ -.++...
T Consensus 169 d~~~~~~~~~~~---~~~~-~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~---~~~~~--v~~~~~s~ 234 (337)
T 1gxr_A 169 DLHNQTLVRQFQ---GHTD-GASCIDISNDGTKLWTGGLDN-----TVRSWDLREGRQLQQH---DFTSQ--IFSLGYCP 234 (337)
T ss_dssp ETTTTEEEEEEC---CCSS-CEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEE---ECSSC--EEEEEECT
T ss_pred eCCCCceeeeee---cccC-ceEEEEECCCCCEEEEEecCC-----cEEEEECCCCceEeee---cCCCc--eEEEEECC
Confidence 999886544331 1111 123333444556777776543 4889999887644432 11111 1223332
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcccccce
Q 010034 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIY 265 (519)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~~~~ 265 (519)
++..+++|+.. ..+..||..+..-..+. ....+ -.++.. .++++++.|+.+
T Consensus 235 ~~~~l~~~~~~------------~~i~~~~~~~~~~~~~~---~~~~~--v~~~~~~~~~~~l~~~~~d----------- 286 (337)
T 1gxr_A 235 TGEWLAVGMES------------SNVEVLHVNKPDKYQLH---LHESC--VLSLKFAYCGKWFVSTGKD----------- 286 (337)
T ss_dssp TSSEEEEEETT------------SCEEEEETTSSCEEEEC---CCSSC--EEEEEECTTSSEEEEEETT-----------
T ss_pred CCCEEEEEcCC------------CcEEEEECCCCCeEEEc---CCccc--eeEEEECCCCCEEEEecCC-----------
Confidence 55666666543 23455677666544333 11111 122333 345666666543
Q ss_pred eCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 266 YNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 266 ~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
..+.+||+.+.+-...... ...-.+++.. ++.+++.|+.++.
T Consensus 287 -g~i~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 287 -NLLNAWRTPYGASIFQSKE-----SSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp -SEEEEEETTTCCEEEEEEC-----SSCEEEEEECTTSCEEEEEETTSC
T ss_pred -CcEEEEECCCCeEEEEecC-----CCcEEEEEECCCCCEEEEecCCCe
Confidence 4578899877654432221 1122233332 5677777776653
No 37
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.77 E-value=0.38 Score=45.39 Aligned_cols=230 Identities=9% Similarity=0.020 Sum_probs=117.6
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE--eCCeEEEEccccCCcCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRL 101 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~--~~~~iyv~GG~~~~~~~ 101 (519)
.++...++.+|+.+..+ ..+.+||+.......+...+. .......-+.+++ -++++|+.+... .
T Consensus 34 ~v~~~~~g~l~v~~~~~-----~~i~~~d~~g~~~~~~~~~~~-----~~~~~~~p~~i~~~~~~g~l~v~~~~~----~ 99 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTNN-----HRIQIFDKEGRFKFQFGECGK-----RDSQLLYPNRVAVVRNSGDIIVTERSP----T 99 (286)
T ss_dssp EEEECTTCCEEEEEGGG-----TEEEEECTTSCEEEEECCBSS-----STTCBSSEEEEEEETTTTEEEEEECGG----G
T ss_pred eEEECCCCCEEEEECCC-----CEEEEECCCCcEEEEecccCC-----CcccccCceEEEEEcCCCeEEEEcCCC----C
Confidence 33334556788876432 458899987544333322110 0011112234444 257899886421 1
Q ss_pred CcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCe
Q 010034 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (519)
Q Consensus 102 ~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~ 181 (519)
..+.+||.....-..+. .+....-+++++..++++|+....+ ..+.+||+.......+...+....+ .
T Consensus 100 ~~i~~~d~~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p---~ 167 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFG----ATILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFP---N 167 (286)
T ss_dssp CEEEEECTTSCEEEEEC----TTTCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSE---E
T ss_pred CEEEEECCCCcEEEEec----CccCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCc---E
Confidence 35889996554433332 1111122345555667888876432 4588999876555554321111111 2
Q ss_pred eEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCc
Q 010034 182 TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (519)
Q Consensus 182 ~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~ 259 (519)
.++.. ++++|+..... +.+.+||+.......+...+... .-.++++ .++.+|+......
T Consensus 168 ~i~~~~~g~l~v~~~~~------------~~i~~~~~~g~~~~~~~~~g~~~---~p~~i~~d~~G~l~v~~~~~~---- 228 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNRA------------HCVKVFNYEGQYLRQIGGEGITN---YPIGVGINSNGEILIADNHNN---- 228 (286)
T ss_dssp EEEECSSSEEEEEEGGG------------TEEEEEETTCCEEEEESCTTTSC---SEEEEEECTTCCEEEEECSSS----
T ss_pred EEEECCCCCEEEEECCC------------CEEEEEcCCCCEEEEEccCCccC---CCcEEEECCCCCEEEEeCCCC----
Confidence 33333 57888875421 45667788666555554322111 1223444 4568888764221
Q ss_pred ccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEc
Q 010034 260 SRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (519)
Q Consensus 260 ~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~G 308 (519)
..+.+||++...-..+..... .. ...+++.. ++++|+..
T Consensus 229 -------~~i~~~~~~g~~~~~~~~~~~--~~-~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 229 -------FNLTIFTQDGQLISALESKVK--HA-QCFDVALMDDGSVVLAS 268 (286)
T ss_dssp -------CEEEEECTTSCEEEEEEESSC--CS-CEEEEEEETTTEEEEEE
T ss_pred -------EEEEEECCCCCEEEEEcccCC--CC-cceeEEECCCCcEEEEC
Confidence 168899987655444443211 11 12233333 67888874
No 38
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.71 E-value=0.27 Score=45.75 Aligned_cols=222 Identities=10% Similarity=-0.058 Sum_probs=111.3
Q ss_pred eEEEEECCcEEEE-EcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcC
Q 010034 23 HSAVNIGKSKVVV-FGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRR 100 (519)
Q Consensus 23 h~~~~~~~~~lyv-~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~ 100 (519)
+.++...++.+|+ .... .+.+.+||+.+......... .. ..-++++.. ++++|+... .
T Consensus 27 ~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~---------~~-~~p~~i~~~~~g~l~v~~~-~---- 86 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFN---------GL-YQPQGLAVDGAGTVYVTDF-N---- 86 (270)
T ss_dssp EEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCC---------SC-CSCCCEEECTTCCEEEEET-T----
T ss_pred cceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeC---------Cc-CCcceeEECCCCCEEEEcC-C----
Confidence 4444445678888 5332 24588888877654443211 11 111334443 567888754 2
Q ss_pred CCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccC
Q 010034 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (519)
Q Consensus 101 ~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~ 180 (519)
..+.+||+.+........ .....-++++...++++|+.... ...+++|+..+......... ... .-
T Consensus 87 -~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~~---~p 152 (270)
T 1rwi_B 87 -NRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFT-GLN---DP 152 (270)
T ss_dssp -TEEEEECTTCSCCEECCC----CSCSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCC-SCC---SC
T ss_pred -CEEEEEeCCCceEeeeec----CCcCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccc-cCC---Cc
Confidence 358999998775544331 11122234445456788887532 23588888776655443211 111 12
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCC
Q 010034 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGW 258 (519)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~ 258 (519)
..++.. ++++|+..... +.+..||+.+..-...... .. ..-.++++ .++.+|+....
T Consensus 153 ~~i~~~~~g~l~v~~~~~------------~~i~~~~~~~~~~~~~~~~-~~---~~p~~i~~d~~g~l~v~~~~----- 211 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDN------------NRVVKLEAESNNQVVLPFT-DI---TAPWGIAVDEAGTVYVTEHN----- 211 (270)
T ss_dssp CCEEECTTCCEEEEEGGG------------TEEEEECTTTCCEEECCCS-SC---CSEEEEEECTTCCEEEEETT-----
T ss_pred eeEEEeCCCCEEEEECCC------------CEEEEEecCCCceEeeccc-CC---CCceEEEECCCCCEEEEECC-----
Confidence 334443 56788865321 3456678777654443211 11 12234444 34578876532
Q ss_pred cccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccC
Q 010034 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGF 310 (519)
Q Consensus 259 ~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~ 310 (519)
.+.+.+||+.+..-....... ...-.+++.- ++.+|+....
T Consensus 212 -------~~~v~~~~~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 212 -------TNQVVKLLAGSTTSTVLPFTG----LNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp -------TSCEEEECTTCSCCEECCCCS----CSCEEEEEECTTCCEEEEEGG
T ss_pred -------CCcEEEEcCCCCcceeeccCC----CCCceeEEECCCCCEEEEECC
Confidence 245889998765433322111 1122333333 4678887653
No 39
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.66 E-value=0.44 Score=44.75 Aligned_cols=220 Identities=12% Similarity=0.002 Sum_probs=117.2
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~ 101 (519)
++++...++.+|+.... .+.+.+||+. +.+...... .....-+.++.. ++.+|+.....
T Consensus 18 ~~i~~d~~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~~----- 77 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHK-----ANMISCINLD-GKITEYPLP---------TPDAKVMCLTISSDGEVWFTENAA----- 77 (299)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECTT-CCEEEEECS---------STTCCEEEEEECTTSCEEEEETTT-----
T ss_pred cceEECCCCCEEEEecC-----CCcEEEEcCC-CCeEEecCC---------cccCceeeEEECCCCCEEEeCCCC-----
Confidence 44445566788886432 2458899998 777665421 011223344443 56888774322
Q ss_pred CcEEEEECCCCeEEEEeeCCCCC-CCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccC
Q 010034 102 GDFWVLDTDIWQWSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (519)
Q Consensus 102 ~dv~~yd~~t~~W~~~~~~g~~P-~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~ 180 (519)
..+++||+. ++..... .| ....-++++...++.+|+.... ...++++|+ +.+........ ....-
T Consensus 78 ~~i~~~~~~-g~~~~~~----~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~---~~~~~ 143 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYT----LPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN---KGSYP 143 (299)
T ss_dssp TEEEEECTT-SCEEEEE----CSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS---TTCCE
T ss_pred CeEEEECCC-CcEEEEe----CCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC---CCCCC
Confidence 348899987 5565554 22 1222334444456788887533 235889998 66666654211 11122
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCC
Q 010034 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGW 258 (519)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~ 258 (519)
..++.. ++++|+.... -..+.+||+ +++......+.. ...-.+++. .++.+|+....
T Consensus 144 ~~i~~~~~g~l~v~~~~------------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~----- 202 (299)
T 2z2n_A 144 SFITLGSDNALWFTENQ------------NNAIGRITE-SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII----- 202 (299)
T ss_dssp EEEEECTTSCEEEEETT------------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT-----
T ss_pred ceEEEcCCCCEEEEeCC------------CCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC-----
Confidence 333443 5688875421 134566788 677766532211 111223444 34678776532
Q ss_pred cccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEc
Q 010034 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (519)
Q Consensus 259 ~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~G 308 (519)
.+.+++||+ +.....+.... + ...-.+++.- ++.+|+..
T Consensus 203 -------~~~i~~~~~-~g~~~~~~~~~--~-~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 203 -------GNKIGRITT-SGEITEFKIPT--P-NARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp -------TTEEEEECT-TCCEEEEECSS--T-TCCEEEEEECSTTCEEEEE
T ss_pred -------CceEEEECC-CCcEEEEECCC--C-CCCceeEEECCCCCEEEec
Confidence 246889998 66666543211 1 1122333333 46787764
No 40
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.60 E-value=0.34 Score=48.64 Aligned_cols=201 Identities=8% Similarity=-0.065 Sum_probs=102.3
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
++.+++.++.+ +.+.++|+.+++.......+. ...+... -.+++. -++++++.|+.+ ..+.+||
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~----~~~~~~~-v~~~~~~~~~~~~~s~~~d-----~~v~~~d 197 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEK----YKKKLGF-VETISIPEHNELWVSQMQA-----NAVHVFD 197 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHH----HHTTCCE-EEEEEEGGGTEEEEEEGGG-----TEEEEEE
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCccc----ccccCCc-eeEEEEcCCCEEEEEECCC-----CEEEEEE
Confidence 46787777643 358999999887654321100 0011111 122222 267888887754 3589999
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~- 186 (519)
+.+.+....-. . ....-.+++...+ ..+|+.++.++ .+..||+.+.+..... .. ...-..++..
T Consensus 198 ~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~~~~~~~---~~--~~~~~~~~~~~ 263 (433)
T 3bws_A 198 LKTLAYKATVD---L-TGKWSKILLYDPIRDLVYCSNWISE-----DISVIDRKTKLEIRKT---DK--IGLPRGLLLSK 263 (433)
T ss_dssp TTTCCEEEEEE---C-SSSSEEEEEEETTTTEEEEEETTTT-----EEEEEETTTTEEEEEC---CC--CSEEEEEEECT
T ss_pred CCCceEEEEEc---C-CCCCeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCCcEEEEe---cC--CCCceEEEEcC
Confidence 98876543321 1 1111233334333 36777765443 5899999988765543 11 1112233333
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCcccccc
Q 010034 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDI 264 (519)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~ 264 (519)
+++.+++++.........| ..+..||+.+.+-.... ..+. ....++. .++.+|+.++..
T Consensus 264 ~g~~l~~~~~~~~~~~~~d----g~i~~~d~~~~~~~~~~---~~~~--~~~~~~~~~~g~~l~~~~~~~---------- 324 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGG----GRLGIYSMDKEKLIDTI---GPPG--NKRHIVSGNTENKIYVSDMCC---------- 324 (433)
T ss_dssp TSSEEEEEEEESCTTCSCC----EEEEEEETTTTEEEEEE---EEEE--CEEEEEECSSTTEEEEEETTT----------
T ss_pred CCCEEEEEECCCCccccCC----CeEEEEECCCCcEEeec---cCCC--CcceEEECCCCCEEEEEecCC----------
Confidence 4444444443221100001 35667888777544432 1111 1112222 234677776532
Q ss_pred eeCcEEEEEcCCCeEE
Q 010034 265 YYNDTIILDRLSAQWK 280 (519)
Q Consensus 265 ~~~~v~~yd~~t~~W~ 280 (519)
+.+.+||+.+.+-.
T Consensus 325 --~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 325 --SKIEVYDLKEKKVQ 338 (433)
T ss_dssp --TEEEEEETTTTEEE
T ss_pred --CEEEEEECCCCcEE
Confidence 46899999876544
No 41
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.56 E-value=0.22 Score=50.48 Aligned_cols=223 Identities=10% Similarity=0.028 Sum_probs=115.3
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~ 125 (519)
..++++|+....-..+... ..........-+++.+++++..+. ...++++|+.+++...+.. .+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----------~~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~---~~~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----------PQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVAS---FPR 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----------SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEEC---CSS
T ss_pred ceEEEEcCCCCCCEEEeCC----------CCcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeec---CCC
Confidence 6789999887655554321 111122222225666666665432 2579999999998877652 221
Q ss_pred CCCccEEEEECCcE-EEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcc
Q 010034 126 PRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIM 203 (519)
Q Consensus 126 ~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 203 (519)
...+.+.-.+++ |++.+..++ ...++.+|+.+.+...+. ..+. ........ +++.+++++.....
T Consensus 224 --~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~---~~~~--~~~~~~~spdg~~l~~~s~~~g~--- 290 (415)
T 2hqs_A 224 --HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVT---DGRS--NNTEPTWFPDSQNLAFTSDQAGR--- 290 (415)
T ss_dssp --CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECC---CCSS--CEEEEEECTTSSEEEEEECTTSS---
T ss_pred --cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCc---CCCC--cccceEECCCCCEEEEEECCCCC---
Confidence 222333334554 554554333 246999999998877665 2211 11122222 45544444322111
Q ss_pred cccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEc
Q 010034 204 GDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (519)
Q Consensus 204 ~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v 282 (519)
..++.+|+.+..-..+... .....+.+. -+++.+++++.... ...++++|+.+.....+
T Consensus 291 ------~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g---------~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 291 ------PQVYKVNINGGAPQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG---------QQHIAKQDLATGGVQVL 350 (415)
T ss_dssp ------CEEEEEETTSSCCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS---------CEEEEEEETTTCCEEEC
T ss_pred ------cEEEEEECCCCCEEEEecC-----CCcccCeEECCCCCEEEEEECcCC---------ceEEEEEECCCCCEEEe
Confidence 2455668877765555411 112222332 45555555543321 24689999999888765
Q ss_pred ccCCCCCCCCcceEEEEe-CCEEEEEccCCCCCCccceEEecC
Q 010034 283 PIGNEPPPARAYHSMTCL-GSLYLLFGGFDGKSTFGDIWWLVP 324 (519)
Q Consensus 283 ~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~~~~~D~w~l~~ 324 (519)
... . ...+.+.. +++.+++++.++. ...+|.++.
T Consensus 351 ~~~-----~-~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~ 385 (415)
T 2hqs_A 351 SST-----F-LDETPSLAPNGTMVIYSSSQGM--GSVLNLVST 385 (415)
T ss_dssp CCS-----S-SCEEEEECTTSSEEEEEEEETT--EEEEEEEET
T ss_pred cCC-----C-CcCCeEEcCCCCEEEEEEcCCC--ccEEEEEEC
Confidence 432 1 22223322 5666666664432 234555554
No 42
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.56 E-value=0.2 Score=55.47 Aligned_cols=227 Identities=11% Similarity=0.031 Sum_probs=122.3
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (519)
+++...++.|++-. .+ .-+++||+.++.+...... ...+. ..-++++.. ++.|++ |... .
T Consensus 367 ~i~~d~~g~lWigt-~~-----~Gl~~~~~~~~~~~~~~~~------~~~~~-~~v~~i~~d~~g~lWi-gt~~-----~ 427 (781)
T 3v9f_A 367 SVCDDGQGKLWIGT-DG-----GGINVFENGKRVAIYNKEN------RELLS-NSVLCSLKDSEGNLWF-GTYL-----G 427 (781)
T ss_dssp EEEECTTSCEEEEE-BS-----SCEEEEETTEEEEECC-----------CCC-SBEEEEEECTTSCEEE-EETT-----E
T ss_pred EEEEcCCCCEEEEe-CC-----CcEEEEECCCCeEEEccCC------CCCCC-cceEEEEECCCCCEEE-Eecc-----C
Confidence 33334456777632 11 2388899988777654211 01122 222344444 567877 3321 2
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCC--CCCCcccC
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG--SVPPPRCG 180 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~--~~p~~r~~ 180 (519)
-+++||+.+++++..... .++ ...-.+.+...++.|++-.. ..+++||+.+.+|+...... ..+... -
T Consensus 428 Gl~~~~~~~~~~~~~~~~-~~~-~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~-i 497 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELE-KNE-LLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENF-V 497 (781)
T ss_dssp EEEEECSSSCEEEECCST-TTC-CCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSC-E
T ss_pred CEEEEcCCCCcEEEeccC-CCC-CCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccce-e
Confidence 489999999999887531 111 12223334445668887432 45999999999998775221 111111 1
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCC
Q 010034 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGW 258 (519)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~ 258 (519)
.+++.. +++|+|-. . . ..+.+||+.+++++.......+|..... +++. .++.|++...
T Consensus 498 ~~i~~d~~g~lWigt-~-~-----------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~-~i~~d~~g~lWi~T~------ 557 (781)
T 3v9f_A 498 RSIAQDSEGRFWIGT-F-G-----------GGVGIYTPDMQLVRKFNQYEGFCSNTIN-QIYRSSKGQMWLATG------ 557 (781)
T ss_dssp EEEEECTTCCEEEEE-S-S-----------SCEEEECTTCCEEEEECTTTTCSCSCEE-EEEECTTSCEEEEET------
T ss_pred EEEEEcCCCCEEEEE-c-C-----------CCEEEEeCCCCeEEEccCCCCCCCCeeE-EEEECCCCCEEEEEC------
Confidence 122222 56777642 1 1 2355679999999887643334433332 2222 4567777432
Q ss_pred cccccceeCcE-EEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEc
Q 010034 259 LSRYDIYYNDT-IILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (519)
Q Consensus 259 ~~~~~~~~~~v-~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~G 308 (519)
+.+ ++||+.+.++.........|.... .+++.- ++.|++.+
T Consensus 558 --------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 558 --------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWAST 600 (781)
T ss_dssp --------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEEC
T ss_pred --------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEc
Confidence 235 888998888877654322333333 344433 56777654
No 43
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.54 E-value=0.12 Score=48.37 Aligned_cols=191 Identities=10% Similarity=-0.043 Sum_probs=100.0
Q ss_pred cCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEECCC-CeEEEEeeCC
Q 010034 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDI-WQWSELTSFG 121 (519)
Q Consensus 44 ~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t-~~W~~~~~~g 121 (519)
.-..++++|+.+++...+... .. .-.+++. -+++.+++++ . ..++++|+.+ ++...+..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~----------~~-~v~~~~~spdg~~l~~~~-~-----~~i~~~d~~~~~~~~~~~~-- 80 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT----------PE-LFEAPNWSPDGKYLLLNS-E-----GLLYRLSLAGDPSPEKVDT-- 80 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE----------SS-CCEEEEECTTSSEEEEEE-T-----TEEEEEESSSCCSCEECCC--
T ss_pred cceeEEEEeCCCCceeeeccC----------Cc-ceEeeEECCCCCEEEEEc-C-----CeEEEEeCCCCCCceEecc--
Confidence 446799999999887765421 11 1223333 3566666654 1 3699999998 77665542
Q ss_pred CCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CC-EEEEEcccCCC
Q 010034 122 DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EK-RLLIYGGRGGG 199 (519)
Q Consensus 122 ~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~ 199 (519)
.+......+++.-.+++.+++++.... ....+|.++..+.+-..+. ... . ...+... ++ .|++.++....
T Consensus 81 -~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~---~~~-~--~~~~~~spdg~~l~~~~~~~~~ 152 (297)
T 2ojh_A 81 -GFATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMT---KNL-P--SYWHGWSPDGKSFTYCGIRDQV 152 (297)
T ss_dssp -TTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECC---SSS-S--EEEEEECTTSSEEEEEEEETTE
T ss_pred -ccccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEee---cCC-C--ccceEECCCCCEEEEEECCCCc
Confidence 222222233444455566666653322 3467899998888766654 111 1 2222232 34 45545543221
Q ss_pred CCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeE
Q 010034 200 GPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQW 279 (519)
Q Consensus 200 ~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W 279 (519)
-.++.+|..+.....+. ..+. .........+++.+++++... -...+|.+++.....
T Consensus 153 ----------~~l~~~~~~~~~~~~~~---~~~~-~~~~~~~s~dg~~l~~~~~~~---------~~~~i~~~~~~~~~~ 209 (297)
T 2ojh_A 153 ----------FDIYSMDIDSGVETRLT---HGEG-RNDGPDYSPDGRWIYFNSSRT---------GQMQIWRVRVDGSSV 209 (297)
T ss_dssp ----------EEEEEEETTTCCEEECC---CSSS-CEEEEEECTTSSEEEEEECTT---------SSCEEEEEETTSSCE
T ss_pred ----------eEEEEEECCCCcceEcc---cCCC-ccccceECCCCCEEEEEecCC---------CCccEEEECCCCCCc
Confidence 23445567777666554 2221 122222223444444443221 125688888877776
Q ss_pred EEccc
Q 010034 280 KRLPI 284 (519)
Q Consensus 280 ~~v~~ 284 (519)
..+..
T Consensus 210 ~~~~~ 214 (297)
T 2ojh_A 210 ERITD 214 (297)
T ss_dssp EECCC
T ss_pred EEEec
Confidence 66543
No 44
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.50 E-value=0.67 Score=44.89 Aligned_cols=218 Identities=11% Similarity=0.105 Sum_probs=107.2
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCC
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t 111 (519)
.+++.|+.+ ..+.++|+.+.+-...-.. .+. .....+..-+++.++.|+.++ .+.+||..+
T Consensus 93 ~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~--------~~~-~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~ 153 (321)
T 3ow8_A 93 PIAASSSLD-----AHIRLWDLENGKQIKSIDA--------GPV-DAWTLAFSPDSQYLATGTHVG-----KVNIFGVES 153 (321)
T ss_dssp SEEEEEETT-----SEEEEEETTTTEEEEEEEC--------CTT-CCCCEEECTTSSEEEEECTTS-----EEEEEETTT
T ss_pred CEEEEEeCC-----CcEEEEECCCCCEEEEEeC--------CCc-cEEEEEECCCCCEEEEEcCCC-----cEEEEEcCC
Confidence 345555433 4577889887654322111 111 111222223566777776543 478899887
Q ss_pred CeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CCEE
Q 010034 112 WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRL 190 (519)
Q Consensus 112 ~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~~l 190 (519)
..-..... . ....-.+++.-.+++.++.|+.++ .+..||+.+.+-...- . ....+ -.++... ++++
T Consensus 154 ~~~~~~~~---~-~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~-~-~h~~~--v~~l~~spd~~~ 220 (321)
T 3ow8_A 154 GKKEYSLD---T-RGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTL-E-GHAMP--IRSLTFSPDSQL 220 (321)
T ss_dssp CSEEEEEE---C-SSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE-C-CCSSC--CCEEEECTTSCE
T ss_pred CceeEEec---C-CCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEE-c-ccCCc--eeEEEEcCCCCE
Confidence 75433221 1 111223344445667888887665 3889999887644322 1 11111 1223333 5677
Q ss_pred EEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcccccceeCcE
Q 010034 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (519)
Q Consensus 191 yv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~v 269 (519)
++.|+.+. .+..||..+......- .+ ....-.+++. .++..++.|+.+ ..+
T Consensus 221 l~s~s~dg------------~i~iwd~~~~~~~~~~-~~---h~~~v~~~~~sp~~~~l~s~s~D------------~~v 272 (321)
T 3ow8_A 221 LVTASDDG------------YIKIYDVQHANLAGTL-SG---HASWVLNVAFCPDDTHFVSSSSD------------KSV 272 (321)
T ss_dssp EEEECTTS------------CEEEEETTTCCEEEEE-CC---CSSCEEEEEECTTSSEEEEEETT------------SCE
T ss_pred EEEEcCCC------------eEEEEECCCcceeEEE-cC---CCCceEEEEECCCCCEEEEEeCC------------CcE
Confidence 77776532 3445676665543321 11 1111112222 355666666643 347
Q ss_pred EEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 270 ~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
.++|+.+.+-...-... ...-.++... ++..++.||.++.
T Consensus 273 ~iwd~~~~~~~~~~~~h----~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 273 KVWDVGTRTCVHTFFDH----QDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp EEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEeCCCCEEEEEEcCC----CCcEEEEEECCCCCEEEEEeCCCe
Confidence 88898776543221110 1112233333 4667778886653
No 45
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.48 E-value=0.23 Score=50.43 Aligned_cols=204 Identities=11% Similarity=0.062 Sum_probs=108.1
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCe-EEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCH-MFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~-iyv~GG~~~~~~~~dv~~y 107 (519)
++..+++++.+++ ...++++|+.+++...+... + ....+.+.. +++ |++.+..++ ...++++
T Consensus 189 dg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~---------~--~~~~~~~~spdg~~la~~~~~~g---~~~i~~~ 252 (415)
T 2hqs_A 189 DGSKLAYVTFESG--RSALVIQTLANGAVRQVASF---------P--RHNGAPAFSPDGSKLAFALSKTG---SLNLYVM 252 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTTCCEEEEECC---------S--SCEEEEEECTTSSEEEEEECTTS---SCEEEEE
T ss_pred CCCEEEEEEecCC--CcEEEEEECCCCcEEEeecC---------C--CcccCEEEcCCCCEEEEEEecCC---CceEEEE
Confidence 4445555554321 25799999999887665421 1 122233332 444 554444332 2469999
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~- 186 (519)
|+.+++...+.. .+ ....+.+.-.+++.+++++... -...++.+|+.+.+-..+.. . .......+..
T Consensus 253 d~~~~~~~~l~~---~~--~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~---~--~~~~~~~~~sp 320 (415)
T 2hqs_A 253 DLASGQIRQVTD---GR--SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITW---E--GSQNQDADVSS 320 (415)
T ss_dssp ETTTCCEEECCC---CS--SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCC---S--SSEEEEEEECT
T ss_pred ECCCCCEEeCcC---CC--CcccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEec---C--CCcccCeEECC
Confidence 999988766542 11 1122333334555444444221 13469999999887655541 1 1111222222
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCccccccee
Q 010034 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYY 266 (519)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~ 266 (519)
+++.+++++..... ..+..+|+.+.+...+.. .. .....+..-+++.+++++.... .
T Consensus 321 dG~~l~~~~~~~g~---------~~i~~~d~~~~~~~~l~~---~~--~~~~~~~spdg~~l~~~s~~~~---------~ 377 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQ---------QHIAKQDLATGGVQVLSS---TF--LDETPSLAPNGTMVIYSSSQGM---------G 377 (415)
T ss_dssp TSSEEEEEEECSSC---------EEEEEEETTTCCEEECCC---SS--SCEEEEECTTSSEEEEEEEETT---------E
T ss_pred CCCEEEEEECcCCc---------eEEEEEECCCCCEEEecC---CC--CcCCeEEcCCCCEEEEEEcCCC---------c
Confidence 55545555433211 356677998888876652 11 2222222345666666654321 2
Q ss_pred CcEEEEEcCCCeEEEccc
Q 010034 267 NDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 267 ~~v~~yd~~t~~W~~v~~ 284 (519)
..+|++|+.......+..
T Consensus 378 ~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 378 SVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEEEEETTSCCEEECCC
T ss_pred cEEEEEECCCCcEEEeeC
Confidence 479999998877777654
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.47 E-value=0.58 Score=43.89 Aligned_cols=221 Identities=10% Similarity=-0.064 Sum_probs=114.9
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (519)
.++...++.+|+..... ..+++||+. ++....... .....-+.++.. ++++|+..... .
T Consensus 61 ~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~~-----~ 120 (299)
T 2z2n_A 61 CLTISSDGEVWFTENAA-----NKIGRITKK-GIIKEYTLP---------NPDSAPYGITEGPNGDIWFTEMNG-----N 120 (299)
T ss_dssp EEEECTTSCEEEEETTT-----TEEEEECTT-SCEEEEECS---------STTCCEEEEEECTTSCEEEEETTT-----T
T ss_pred eEEECCCCCEEEeCCCC-----CeEEEECCC-CcEEEEeCC---------CcCCCceeeEECCCCCEEEEecCC-----c
Confidence 33344556777765321 348888886 455444311 011223444444 57888864322 3
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCee
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~ 182 (519)
.++++|+ +++....... .....-.+++...++.+|+.... ...+++||+ +.+...+...... ..-..
T Consensus 121 ~i~~~d~-~g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~~ 187 (299)
T 2z2n_A 121 RIGRITD-DGKIREYELP---NKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTPA---SGPVG 187 (299)
T ss_dssp EEEEECT-TCCEEEEECS---STTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEEE
T ss_pred eEEEECC-CCCEEEecCC---CCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCCC---Cccee
Confidence 5889999 6666655421 11222334455556788886521 245899999 7877765321111 11123
Q ss_pred EEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcc
Q 010034 183 ATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLS 260 (519)
Q Consensus 183 ~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~ 260 (519)
++.. ++++|+.... -+.+.+||+ ++++.....+. +. ..-.+++. .++.+|+....
T Consensus 188 i~~~~~g~l~v~~~~------------~~~i~~~~~-~g~~~~~~~~~--~~-~~~~~i~~~~~g~l~v~~~~------- 244 (299)
T 2z2n_A 188 ITKGNDDALWFVEII------------GNKIGRITT-SGEITEFKIPT--PN-ARPHAITAGAGIDLWFTEWG------- 244 (299)
T ss_dssp EEECTTSSEEEEETT------------TTEEEEECT-TCCEEEEECSS--TT-CCEEEEEECSTTCEEEEETT-------
T ss_pred EEECCCCCEEEEccC------------CceEEEECC-CCcEEEEECCC--CC-CCceeEEECCCCCEEEeccC-------
Confidence 3333 4678876431 134566788 77776654221 11 11223444 35678876421
Q ss_pred cccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEcc
Q 010034 261 RYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (519)
Q Consensus 261 ~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG 309 (519)
.+.+++||+ +.....+..... ...-.+++.-++.+|+...
T Consensus 245 -----~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~g~l~v~~~ 284 (299)
T 2z2n_A 245 -----ANKIGRLTS-NNIIEEYPIQIK---SAEPHGICFDGETIWFAME 284 (299)
T ss_dssp -----TTEEEEEET-TTEEEEEECSSS---SCCEEEEEECSSCEEEEET
T ss_pred -----CceEEEECC-CCceEEEeCCCC---CCccceEEecCCCEEEEec
Confidence 245889998 445554432111 1122334445577777653
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.23 Score=48.44 Aligned_cols=109 Identities=8% Similarity=0.060 Sum_probs=63.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-C--CeEEEEccccCCcCCCcEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D--CHMFIFGGRFGSRRLGDFW 105 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~--~~iyv~GG~~~~~~~~dv~ 105 (519)
.++..++.|+.+ ..+.+||+....+..+.... ... ..-.+++.. + +.+++.|+.++ .+.
T Consensus 21 ~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~-------~h~-~~v~~~~~~~~~~~~~l~s~~~dg-----~v~ 82 (379)
T 3jrp_A 21 YYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLT-------GHE-GPVWRVDWAHPKFGTILASCSYDG-----KVL 82 (379)
T ss_dssp SSSSEEEEEETT-----SCEEEEEEETTEEEEEEEEC-------CCS-SCEEEEEECCGGGCSEEEEEETTS-----CEE
T ss_pred CCCCEEEEEECC-----CcEEEEecCCCcceeeeEec-------CCC-CcEEEEEeCCCCCCCEEEEeccCC-----EEE
Confidence 445667777643 35788888877776654321 111 112233332 2 57777777654 488
Q ss_pred EEECCCCeEEEEeeCCCCCCCC-CccEEEEECC--cEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 106 VLDTDIWQWSELTSFGDLPSPR-DFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 106 ~yd~~t~~W~~~~~~g~~P~~r-~~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
++|..+++|..+.. ..... .-.+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 83 iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 83 IWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp EEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred EEEcCCCceeEeee---ecCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 99999998877663 22221 1223333333 46777777654 3788888766
No 48
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.41 E-value=0.45 Score=45.23 Aligned_cols=151 Identities=9% Similarity=-0.072 Sum_probs=92.4
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEEC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
++.||+..|..+. +.++|+.+++=..-. .+..-.+..++..+++||+....+ +.+++||+
T Consensus 64 ~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~----------l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~ 123 (268)
T 3nok_A 64 QGHFFESTGHQGT-----LRQLSLESAQPVWME----------RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSG 123 (268)
T ss_dssp TTEEEEEETTTTE-----EEECCSSCSSCSEEE----------ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEET
T ss_pred CCEEEEEcCCCCE-----EEEEECCCCcEEeEE----------CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEEC
Confidence 4789998886543 889999987632221 122334566788899999985432 56999999
Q ss_pred CCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccC-eeEEEeCC
Q 010034 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG-HTATMVEK 188 (519)
Q Consensus 110 ~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~-~~~~~~~~ 188 (519)
.+.+-..-- +.+-.+.+++..+ +++|+.-| .+.++.+|+.|.+-..--.-+..+.+... -.+...++
T Consensus 124 ~Tl~~~~ti-----~~~~eGwGLt~Dg-~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG 191 (268)
T 3nok_A 124 MPPQRERTT-----RYSGEGWGLCYWN-GKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANG 191 (268)
T ss_dssp TTTEEEEEE-----ECSSCCCCEEEET-TEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred CcCcEEEEE-----eCCCceeEEecCC-CEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCC
Confidence 987654322 1223345666554 48888754 34699999999764432211122222211 22344588
Q ss_pred EEEEEcccCCCCCcccccccccccccccCCCCceEE
Q 010034 189 RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ 224 (519)
Q Consensus 189 ~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~ 224 (519)
+||+-- |.-+.+.+-|+.+++-..
T Consensus 192 ~lyanv------------w~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 192 VIYANI------------WHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEEEEE------------TTCSEEEEECTTTCBEEE
T ss_pred EEEEEE------------CCCCeEEEEeCCCCcEEE
Confidence 888521 122566677999987654
No 49
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.40 E-value=0.19 Score=49.74 Aligned_cols=213 Identities=11% Similarity=0.050 Sum_probs=110.5
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CC-eEEEEccccCCcCCCcEEEEEC
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
.||+.|+.+ +.+.++|+.+++....-.. +. .-.+++.. ++ .||+.|..+ ..+.+||+
T Consensus 45 ~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~---------~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~ 103 (391)
T 1l0q_A 45 KVYVANAHS-----NDVSIIDTATNNVIATVPA---------GS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDT 103 (391)
T ss_dssp EEEEEEGGG-----TEEEEEETTTTEEEEEEEC---------SS--SEEEEEECTTSSEEEEEETTT-----TEEEEEET
T ss_pred EEEEECCCC-----CeEEEEECCCCeEEEEEEC---------CC--CccceEECCCCCEEEEEECCC-----CEEEEEEC
Confidence 566776543 4689999988765443211 11 22333333 33 566655432 35999999
Q ss_pred CCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe--
Q 010034 110 DIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-- 186 (519)
Q Consensus 110 ~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-- 186 (519)
.+++-..... ......+++...++ .+|+.++.+ ..+..||+.+.+....-..+ ..-..++..
T Consensus 104 ~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~d 168 (391)
T 1l0q_A 104 TSNTVAGTVK-----TGKSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG-----RSPKGIAVTPD 168 (391)
T ss_dssp TTTEEEEEEE-----CSSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC-----SSEEEEEECTT
T ss_pred CCCeEEEEEe-----CCCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC-----CCcceEEECCC
Confidence 9987655442 11122344443343 577777544 35999999988766554211 111233333
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCC-EEEEEeccCCCCCcccccc
Q 010034 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGH-YLLLFGGHGTGGWLSRYDI 264 (519)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~-~iyv~GG~~~~~~~~~~~~ 264 (519)
++.+|+.++.. ..+..+|+.+++...... . ...-.+++. .++ .+++.+. ..
T Consensus 169 g~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~---~--~~~~~~~~~~~~g~~l~~~~~-~~--------- 221 (391)
T 1l0q_A 169 GTKVYVANFDS------------MSISVIDTVTNSVIDTVK---V--EAAPSGIAVNPEGTKAYVTNV-DK--------- 221 (391)
T ss_dssp SSEEEEEETTT------------TEEEEEETTTTEEEEEEE---C--SSEEEEEEECTTSSEEEEEEE-CS---------
T ss_pred CCEEEEEeCCC------------CEEEEEECCCCeEEEEEe---c--CCCccceEECCCCCEEEEEec-Cc---------
Confidence 34677765432 345667888776554431 1 111122333 334 4555442 11
Q ss_pred eeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe--CCEEEEEccCCC
Q 010034 265 YYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFDG 312 (519)
Q Consensus 265 ~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~--~~~iyv~GG~~~ 312 (519)
..+.+.+||+.+.+-...-... ....+++.. +..+|+.++.++
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~s~~~d~ 266 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVG-----PDPAGIAVTPDGKKVYVALSFXN 266 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECC-----SSEEEEEECTTSSEEEEEETTTT
T ss_pred CCCcEEEEECCCCeEEEEEecC-----CCccEEEEccCCCEEEEEcCCCC
Confidence 1256899999876543322211 112233333 346767765543
No 50
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.28 E-value=1 Score=45.36 Aligned_cols=216 Identities=13% Similarity=0.093 Sum_probs=109.9
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEEC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
++..++.|+.+ +.+.+||..+.+-...- . ... ..-.++..++++++.|+.++ .+.++|.
T Consensus 142 d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~-~--------~h~--~~v~~l~~~~~~l~sg~~dg-----~i~vwd~ 200 (435)
T 1p22_A 142 DDQKIVSGLRD-----NTIKIWDKNTLECKRIL-T--------GHT--GSVLCLQYDERVIITGSSDS-----TVRVWDV 200 (435)
T ss_dssp CSSEEEEEESS-----SCEEEEESSSCCEEEEE-C--------CCS--SCEEEEECCSSEEEEEETTS-----CEEEEES
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeEEEEE-c--------CCC--CcEEEEEECCCEEEEEcCCC-----eEEEEEC
Confidence 45677777754 45888998876643321 1 111 11233334777888887664 4889999
Q ss_pred CCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCE
Q 010034 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKR 189 (519)
Q Consensus 110 ~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~ 189 (519)
.+++-...- ......-.++...+ ..++.|+.++ .+..||+.+..-..... ..........++..++.
T Consensus 201 ~~~~~~~~~-----~~h~~~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~ 267 (435)
T 1p22_A 201 NTGEMLNTL-----IHHCEAVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDK 267 (435)
T ss_dssp SSCCEEEEE-----CCCCSCEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEE--EECCCSSCEEEEEEETT
T ss_pred CCCcEEEEE-----cCCCCcEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeee--EecCCCCcEEEEEeCCC
Confidence 887654332 11111122333344 4666777654 38888987765321100 00111112223333555
Q ss_pred EEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcE
Q 010034 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (519)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v 269 (519)
.++.|+.+ ..+..||+.+.+-...-. .... ...++..++..++.|+.+ +.+
T Consensus 268 ~l~s~~~d------------g~i~vwd~~~~~~~~~~~--~~~~---~v~~~~~~~~~l~~g~~d------------g~i 318 (435)
T 1p22_A 268 YIVSASGD------------RTIKVWNTSTCEFVRTLN--GHKR---GIACLQYRDRLVVSGSSD------------NTI 318 (435)
T ss_dssp EEEEEETT------------SEEEEEETTTCCEEEEEE--CCSS---CEEEEEEETTEEEEEETT------------SCE
T ss_pred EEEEEeCC------------CeEEEEECCcCcEEEEEc--CCCC---cEEEEEeCCCEEEEEeCC------------CeE
Confidence 56666543 234556776654433221 1111 112223345566666643 458
Q ss_pred EEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCC
Q 010034 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (519)
Q Consensus 270 ~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~ 313 (519)
.+||+.+..-...-.. ....-.++..++..++.|+.++.
T Consensus 319 ~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 319 RLWDIECGACLRVLEG-----HEELVRCIRFDNKRIVSGAYDGK 357 (435)
T ss_dssp EEEETTTCCEEEEECC-----CSSCEEEEECCSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeC-----CcCcEEEEEecCCEEEEEeCCCc
Confidence 8999886543222111 11122334447888888887664
No 51
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.27 E-value=0.47 Score=52.52 Aligned_cols=230 Identities=13% Similarity=0.020 Sum_probs=119.3
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCC-CCCCcceeEEEEe-CCe-EEEEccccCCcC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQV-GPGPRAFHIAVAI-DCH-MFIFGGRFGSRR 100 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~-~p~~R~~h~~~~~-~~~-iyv~GG~~~~~~ 100 (519)
+++...++.|++- ... .-+.+||+.++++........ .+. ......-++++.. +++ |+|- ...
T Consensus 361 ~i~~d~~g~lWiG-t~~-----~Gl~~~~~~~~~~~~~~~~~~---~~~~~l~~~~v~~i~~d~~g~~lWig-t~~---- 426 (795)
T 4a2l_A 361 CIVEDKDKNLWIG-TND-----GGLNLYNPITQRFTSYTLQED---ESARGIGSNNIKAVYVDEKKSLVYIG-THA---- 426 (795)
T ss_dssp EEEECTTSCEEEE-ESS-----SCEEEECTTTCCEEEECCC---------CCSCSCEEEEEEETTTTEEEEE-ETT----
T ss_pred EEEECCCCCEEEE-ECC-----CCeEEEcCCCCcEEEEecCCC---CcccCCCCccEEEEEEcCCCCEEEEE-eCc----
Confidence 3344455677772 221 237889999988877642210 000 0111223444443 566 6763 221
Q ss_pred CCcEEEEECCCCeEEEEeeCC-CCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcc-
Q 010034 101 LGDFWVLDTDIWQWSELTSFG-DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR- 178 (519)
Q Consensus 101 ~~dv~~yd~~t~~W~~~~~~g-~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r- 178 (519)
.-+++||+.++++....... .++.. .-.+++...++.|++-.. +.+++||+.+.+|+.+.... .+...
T Consensus 427 -~Gl~~~d~~~~~~~~~~~~~~~l~~~-~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~-~~~~~~ 496 (795)
T 4a2l_A 427 -GGLSILHRNSGQVENFNQRNSQLVNE-NVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEK-DGTPVV 496 (795)
T ss_dssp -TEEEEEETTTCCEEEECTTTSCCSCS-CEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCT-TCCBCC
T ss_pred -CceeEEeCCCCcEEEeecCCCCcCCC-eeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccc-cccccC
Confidence 23899999999888876311 12211 123333334567777542 34999999999999876321 01111
Q ss_pred -cC-eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecC---CCCCCCCcceeEEEE-eCCEEEEEe
Q 010034 179 -CG-HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKL---PGQAPSSRCGHTITS-GGHYLLLFG 251 (519)
Q Consensus 179 -~~-~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~---~g~~P~~r~~~s~~~-~~~~iyv~G 251 (519)
.. .++... +++|++-.. ..+.+||+.++++ .... ...++.... .+++. .++.|++..
T Consensus 497 ~~~i~~i~~d~~g~lWigt~--------------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i-~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 497 SKQITTLFRDSHKRLWIGGE--------------EGLSVFKQEGLDI-QKASILPVSNVTKLFT-NCIYEASNGIIWVGT 560 (795)
T ss_dssp CCCEEEEEECTTCCEEEEES--------------SCEEEEEEETTEE-EECCCSCSCGGGGSCE-EEEEECTTSCEEEEE
T ss_pred CceEEEEEECCCCCEEEEeC--------------CceEEEeCCCCeE-EEecCCCCCCCCCCee-EEEEECCCCCEEEEe
Confidence 11 122222 567777432 2245568888877 4331 011222111 22332 456777743
Q ss_pred ccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEc
Q 010034 252 GHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (519)
Q Consensus 252 G~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~G 308 (519)
. +.+++||+.+.++.........|... ..+++.- ++.+++.+
T Consensus 561 ~--------------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 561 R--------------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLST 603 (795)
T ss_dssp S--------------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEE
T ss_pred C--------------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEc
Confidence 2 23789999999988765432233332 2333333 46777765
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.25 E-value=0.62 Score=44.36 Aligned_cols=222 Identities=15% Similarity=0.065 Sum_probs=109.9
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEee-eecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEE
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQP-ECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFW 105 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l-~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~ 105 (519)
..++.+++.|+ + ..+.+||+.+...... .... .......-.+++.. +++.++.|+.++ .+.
T Consensus 60 ~~~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~ 122 (337)
T 1gxr_A 60 SNPTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLD------CLNRDNYIRSCKLLPDGCTLIVGGEAS-----TLS 122 (337)
T ss_dssp CSSSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEE------CSCTTSBEEEEEECTTSSEEEEEESSS-----EEE
T ss_pred ecCCcEEEEcC-C-----CeEEEEECCCCCceeeeeccc------ccCCCCcEEEEEEcCCCCEEEEEcCCC-----cEE
Confidence 34456667666 3 4688899877542111 1000 00111122233333 456677776543 589
Q ss_pred EEECCCCeEEEEeeCCCCCCCCC-ccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEE
Q 010034 106 VLDTDIWQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTAT 184 (519)
Q Consensus 106 ~yd~~t~~W~~~~~~g~~P~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~ 184 (519)
+||+.+.+...... ...... -.+++...++..++.|+.++ .+..||+.+.+....- ...... -.++.
T Consensus 123 ~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~~~~~~---~~~~~~-i~~~~ 190 (337)
T 1gxr_A 123 IWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQTLVRQF---QGHTDG-ASCID 190 (337)
T ss_dssp EEECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE---CCCSSC-EEEEE
T ss_pred EEECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCceeeee---ecccCc-eEEEE
Confidence 99999887544432 111111 12333344556777777654 3889999887655432 111111 12222
Q ss_pred Ee-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcccc
Q 010034 185 MV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (519)
Q Consensus 185 ~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~ 262 (519)
.. ++..++.|+.. ..+..||+.+.+-.... ..+.+ -.++.. .++..+++|+.+
T Consensus 191 ~~~~~~~l~~~~~d------------g~i~~~d~~~~~~~~~~---~~~~~--v~~~~~s~~~~~l~~~~~~-------- 245 (337)
T 1gxr_A 191 ISNDGTKLWTGGLD------------NTVRSWDLREGRQLQQH---DFTSQ--IFSLGYCPTGEWLAVGMES-------- 245 (337)
T ss_dssp ECTTSSEEEEEETT------------SEEEEEETTTTEEEEEE---ECSSC--EEEEEECTTSSEEEEEETT--------
T ss_pred ECCCCCEEEEEecC------------CcEEEEECCCCceEeee---cCCCc--eEEEEECCCCCEEEEEcCC--------
Confidence 32 55566666542 33556777766543332 11211 123333 455666666533
Q ss_pred cceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCC
Q 010034 263 DIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (519)
Q Consensus 263 ~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~ 312 (519)
..+.+||+.+..-..+... ...-.++... ++++++.|+.++
T Consensus 246 ----~~i~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 246 ----SNVEVLHVNKPDKYQLHLH-----ESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp ----SCEEEEETTSSCEEEECCC-----SSCEEEEEECTTSSEEEEEETTS
T ss_pred ----CcEEEEECCCCCeEEEcCC-----ccceeEEEECCCCCEEEEecCCC
Confidence 3588899877654333221 1122233333 467777777654
No 53
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.25 E-value=0.85 Score=43.43 Aligned_cols=194 Identities=11% Similarity=0.095 Sum_probs=94.6
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEEC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
++.+++.|+.+ ..+.+||+.+.+-...-. ............-++.+++.|+.++ .+.++|+
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~ 136 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDV 136 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEE---------CCSSCEEEEEECSSSSEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEc---------CCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEEC
Confidence 34455555543 357788887765322211 1111111112222456777777654 4889999
Q ss_pred CCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CC
Q 010034 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EK 188 (519)
Q Consensus 110 ~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~ 188 (519)
.+++-...-. ... ..-.+++...++.+++.|+.++ .+..||+.+.+-........ .+.. ..+... ++
T Consensus 137 ~~~~~~~~~~---~~~-~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~--~~~~-~~~~~~~~~ 204 (312)
T 4ery_A 137 KTGKCLKTLP---AHS-DPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLKTLIDDD--NPPV-SFVKFSPNG 204 (312)
T ss_dssp TTCCEEEEEC---CCS-SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCSS--CCCE-EEEEECTTS
T ss_pred CCCEEEEEec---CCC-CcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCceeeEEeccC--CCce-EEEEECCCC
Confidence 8876433221 111 1112233334567778887665 38899998876544321111 1111 112222 45
Q ss_pred EEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCc-ceeEEEEeCCEEEEEeccCCCCCcccccceeC
Q 010034 189 RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSR-CGHTITSGGHYLLLFGGHGTGGWLSRYDIYYN 267 (519)
Q Consensus 189 ~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r-~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 267 (519)
+.++.|+.+ ..+..||..+.+-...-. +...... ........++.+++.|+.+ .
T Consensus 205 ~~l~~~~~d------------~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~d------------g 259 (312)
T 4ery_A 205 KYILAATLD------------NTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVSGSED------------N 259 (312)
T ss_dssp SEEEEEETT------------TEEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEEECCTT------------S
T ss_pred CEEEEEcCC------------CeEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEEEECCC------------C
Confidence 566666543 234556776665333221 1111111 1112223456677777643 3
Q ss_pred cEEEEEcCCCeE
Q 010034 268 DTIILDRLSAQW 279 (519)
Q Consensus 268 ~v~~yd~~t~~W 279 (519)
.+.+||+.+..-
T Consensus 260 ~i~vwd~~~~~~ 271 (312)
T 4ery_A 260 LVYIWNLQTKEI 271 (312)
T ss_dssp CEEEEETTTCCE
T ss_pred EEEEEECCCchh
Confidence 578899877653
No 54
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.22 E-value=0.77 Score=44.44 Aligned_cols=178 Identities=11% Similarity=-0.042 Sum_probs=90.6
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++.+++.|+.++ .+.++|+.+++-...-. ..+. ...+++.-.+++.++.|+.++ .+..||..+.+-
T Consensus 91 ~~~~l~s~s~D~-----~i~lWd~~~~~~~~~~~--~~~~--~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~~ 156 (321)
T 3ow8_A 91 TLPIAASSSLDA-----HIRLWDLENGKQIKSID--AGPV--DAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGKK 156 (321)
T ss_dssp SSSEEEEEETTS-----EEEEEETTTTEEEEEEE--CCTT--CCCCEEECTTSSEEEEECTTS-----EEEEEETTTCSE
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCCEEEEEe--CCCc--cEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCce
Confidence 456677777553 58899998876543321 1111 123444455667778887654 378888887654
Q ss_pred EEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-e
Q 010034 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~ 243 (519)
...- .. ....-.+++.. +++.++.|+.+ ..+..||+.+.+-...- . ....+ . .+++. .
T Consensus 157 ~~~~---~~-~~~~v~~~~~spdg~~lasg~~d------------g~i~iwd~~~~~~~~~~-~-~h~~~-v-~~l~~sp 216 (321)
T 3ow8_A 157 EYSL---DT-RGKFILSIAYSPDGKYLASGAID------------GIINIFDIATGKLLHTL-E-GHAMP-I-RSLTFSP 216 (321)
T ss_dssp EEEE---EC-SSSCEEEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEE-C-CCSSC-C-CEEEECT
T ss_pred eEEe---cC-CCceEEEEEECCCCCEEEEEcCC------------CeEEEEECCCCcEEEEE-c-ccCCc-e-eEEEEcC
Confidence 3321 10 11111222222 56677777653 23455677766543321 1 11111 1 12233 4
Q ss_pred CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 244 ~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
++.+++.|+.+ ..+.+||+.+......-... ...-.+++.. ++.+++.|+.++.
T Consensus 217 d~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~h----~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 217 DSQLLVTASDD------------GYIKIYDVQHANLAGTLSGH----ASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp TSCEEEEECTT------------SCEEEEETTTCCEEEEECCC----SSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCEEEEEcCC------------CeEEEEECCCcceeEEEcCC----CCceEEEEECCCCCEEEEEeCCCc
Confidence 56677777643 34788998766543321110 1112222222 5677788887653
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.12 E-value=0.52 Score=47.22 Aligned_cols=206 Identities=10% Similarity=-0.027 Sum_probs=100.3
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~ 106 (519)
.++.+++.|+.+ ..+.+||+.+.+....-.. .. ..-.+++.. +..+|+.++.+ ..+.+
T Consensus 179 ~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~l~~~~~~~-----~~i~~ 238 (433)
T 3bws_A 179 EHNELWVSQMQA-----NAVHVFDLKTLAYKATVDL---------TG-KWSKILLYDPIRDLVYCSNWIS-----EDISV 238 (433)
T ss_dssp GGTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC---------SS-SSEEEEEEETTTTEEEEEETTT-----TEEEE
T ss_pred CCCEEEEEECCC-----CEEEEEECCCceEEEEEcC---------CC-CCeeEEEEcCCCCEEEEEecCC-----CcEEE
Confidence 345677776643 4688999987654332110 11 112233333 34566666543 35899
Q ss_pred EECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCc---CCCcEEEEECCCCcEEEeccCCCCCCcccCeeE
Q 010034 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---WLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTA 183 (519)
Q Consensus 107 yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~ 183 (519)
||+.+++..... +....-.+++...+++.+++++..... .-..+..||+.+.+-.... ..+. ....+
T Consensus 239 ~d~~~~~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~---~~~~--~~~~~ 308 (433)
T 3bws_A 239 IDRKTKLEIRKT-----DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI---GPPG--NKRHI 308 (433)
T ss_dssp EETTTTEEEEEC-----CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE---EEEE--CEEEE
T ss_pred EECCCCcEEEEe-----cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec---cCCC--CcceE
Confidence 999988765433 122222334444455444454432221 1246889999888654432 1111 11122
Q ss_pred EEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCC-EEEEEeccCCCCC-
Q 010034 184 TMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGH-YLLLFGGHGTGGW- 258 (519)
Q Consensus 184 ~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~-~iyv~GG~~~~~~- 258 (519)
+.. + +.+|+.++.. ..+..||+.+.+-...- +....-.+++. .++ .+|+.+. ..+..
T Consensus 309 ~~~~~g~~l~~~~~~~------------~~v~v~d~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~-~~~~~~ 370 (433)
T 3bws_A 309 VSGNTENKIYVSDMCC------------SKIEVYDLKEKKVQKSI-----PVFDKPNTIALSPDGKYLYVSCR-GPNHPT 370 (433)
T ss_dssp EECSSTTEEEEEETTT------------TEEEEEETTTTEEEEEE-----ECSSSEEEEEECTTSSEEEEEEC-CCCCTT
T ss_pred EECCCCCEEEEEecCC------------CEEEEEECCCCcEEEEe-----cCCCCCCeEEEcCCCCEEEEEec-CCCccc
Confidence 222 3 3687776532 34566787766544332 11111223333 334 4554443 22100
Q ss_pred --cccccceeCcEEEEEcCCCeEEEc
Q 010034 259 --LSRYDIYYNDTIILDRLSAQWKRL 282 (519)
Q Consensus 259 --~~~~~~~~~~v~~yd~~t~~W~~v 282 (519)
..-....-..++++|+.+.+....
T Consensus 371 ~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp TCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred cccccccccceEEEEEECCCCcEEEE
Confidence 000000124799999988765543
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.83 Score=45.05 Aligned_cols=220 Identities=8% Similarity=-0.072 Sum_probs=103.5
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.|+.+ ..+.+||.....-..+.. .. ..-.+++.. +++.++.|+.++ .+.+|
T Consensus 118 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~~~l~~~~~d~-----~i~iw 176 (425)
T 1r5m_A 118 HDGNSIVTGVEN-----GELRLWNKTGALLNVLNF----------HR-APIVSVKWNKDGTHIISMDVEN-----VTILW 176 (425)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTSCEEEEECC----------CC-SCEEEEEECTTSSEEEEEETTC-----CEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEeCCCCeeeeccC----------CC-ccEEEEEECCCCCEEEEEecCC-----eEEEE
Confidence 445677777654 357888854443333321 11 112333333 456666666543 48899
Q ss_pred ECCCCeEEEEeeCCCCC-----------CCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCC
Q 010034 108 DTDIWQWSELTSFGDLP-----------SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP 176 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P-----------~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~ 176 (519)
|..+++..........+ .+....+++...++. ++.|+.++ .+..||+.+.+-...- ...
T Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g-----~i~~~d~~~~~~~~~~---~~~- 246 (425)
T 1r5m_A 177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKG-----AIFVYQITEKTPTGKL---IGH- 246 (425)
T ss_dssp ETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGGG-----CEEEEETTCSSCSEEE---CCC-
T ss_pred ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCCC-----eEEEEEcCCCceeeee---ccC-
Confidence 99887655433211111 000023334444544 56666543 4889998876433221 111
Q ss_pred cccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccC
Q 010034 177 PRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHG 254 (519)
Q Consensus 177 ~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~ 254 (519)
...-.++... ++++++.|+..+ .+..||..+.+....-. ... ..-.++.. .++ .++.|+.+
T Consensus 247 ~~~i~~~~~~~~~~~l~~~~~d~------------~i~i~d~~~~~~~~~~~--~~~--~~i~~~~~~~~~-~l~~~~~d 309 (425)
T 1r5m_A 247 HGPISVLEFNDTNKLLLSASDDG------------TLRIWHGGNGNSQNCFY--GHS--QSIVSASWVGDD-KVISCSMD 309 (425)
T ss_dssp SSCEEEEEEETTTTEEEEEETTS------------CEEEECSSSBSCSEEEC--CCS--SCEEEEEEETTT-EEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEcCCC------------EEEEEECCCCccceEec--CCC--ccEEEEEECCCC-EEEEEeCC
Confidence 1111223333 455666666432 24445665543222210 111 11123333 344 55656533
Q ss_pred CCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCC
Q 010034 255 TGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (519)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~ 312 (519)
..+.+||+.+.+-...-... ...-.++... ++.+++.|+.++
T Consensus 310 ------------~~i~i~d~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 310 ------------GSVRLWSLKQNTLLALSIVD----GVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp ------------SEEEEEETTTTEEEEEEECT----TCCEEEEEECTTSSEEEEEETTS
T ss_pred ------------CcEEEEECCCCcEeEecccC----CccEEEEEEcCCCCEEEEEECCC
Confidence 45889998776543322211 1112222222 567777887665
No 57
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.95 E-value=1.1 Score=41.98 Aligned_cols=219 Identities=9% Similarity=-0.049 Sum_probs=113.2
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (519)
.++...++.+|+.... .+.+.+||+. +++...... .....-+.++.. ++++|+..... .
T Consensus 66 ~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~~-----~ 125 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLP---------QPDSGPYGITEGLNGDIWFTQLNG-----D 125 (300)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECS---------STTCCEEEEEECSTTCEEEEETTT-----T
T ss_pred eEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCC---------CCCCCCccceECCCCCEEEEccCC-----C
Confidence 3444455677776432 2458889988 676654321 011223444444 57888764322 3
Q ss_pred cEEEEECCCCeEEEEeeCCCCCC-CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCe
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~ 181 (519)
.+++||+. ++..... .+. ...-++++...++++|+.... ...+++||+ +.+...+...... ..-.
T Consensus 126 ~i~~~~~~-g~~~~~~----~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~ 191 (300)
T 2qc5_A 126 RIGKLTAD-GTIYEYD----LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLPTNA---AAPV 191 (300)
T ss_dssp EEEEECTT-SCEEEEE----CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEE
T ss_pred eEEEECCC-CCEEEcc----CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCCCCC---CCcc
Confidence 58899988 6666554 221 122234444456678886532 235899998 7777765421111 1112
Q ss_pred eEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCc
Q 010034 182 TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (519)
Q Consensus 182 ~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~ 259 (519)
.++.. ++.+|+..... +.+.+||+ ++++.....+.. ...-.+++. .++.+|+....
T Consensus 192 ~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~------ 249 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMG------------NKIGRITT-TGEISEYDIPTP---NARPHAITAGKNSEIWFTEWG------ 249 (300)
T ss_dssp EEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT------
T ss_pred eEEECCCCCEEEEccCC------------CEEEEEcC-CCcEEEEECCCC---CCCceEEEECCCCCEEEeccC------
Confidence 33333 56788764211 34566787 566666542211 111223444 35678876521
Q ss_pred ccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEc
Q 010034 260 SRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (519)
Q Consensus 260 ~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~G 308 (519)
.+.+.+||+ +.+......... ...-++++.- ++.+|+.+
T Consensus 250 ------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 250 ------ANQIGRITN-DNTIQEYQLQTE---NAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp ------TTEEEEECT-TSCEEEEECCST---TCCCCCEEECTTSCEEEEC
T ss_pred ------CCeEEEECC-CCcEEEEECCcc---CCccceeEeCCCCCEEEEc
Confidence 256888988 455554432111 1112334433 46777754
No 58
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.92 E-value=1.1 Score=41.88 Aligned_cols=220 Identities=12% Similarity=-0.016 Sum_probs=115.9
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~ 101 (519)
+.++...++.||+.... .+.+.+||+. ++....... .....-+.++.. ++++|+.....
T Consensus 23 ~~i~~d~~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~~----- 82 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHK-----ANKISSLDQS-GRIKEFEVP---------TPDAKVMCLIVSSLGDIWFTENGA----- 82 (300)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECS---------STTCCEEEEEECTTSCEEEEETTT-----
T ss_pred ceeeECCCCCEEEEcCC-----CCeEEEECCC-CceEEEECC---------CCCCcceeEEECCCCCEEEEecCC-----
Confidence 44555566788886532 2458889988 776654311 011123344443 46788864322
Q ss_pred CcEEEEECCCCeEEEEeeCCCCCC-CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccC
Q 010034 102 GDFWVLDTDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (519)
Q Consensus 102 ~dv~~yd~~t~~W~~~~~~g~~P~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~ 180 (519)
..+.+||+. +++..... |. ...-++++...++.+|+.... ...+++||+. .+........ ....-
T Consensus 83 ~~v~~~d~~-g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~---~~~~~ 148 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPL----PQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYDLPN---KGSYP 148 (300)
T ss_dssp TEEEEECTT-SCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEECSS---TTCCE
T ss_pred CeEEEECCC-CCeEEecC----CCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEccCCC---CCCCc
Confidence 358999998 77766542 21 122334444456788887532 2358899988 6666553211 11122
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCC
Q 010034 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGW 258 (519)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~ 258 (519)
+.++.. ++++|+..... ..+.+||+ +++......+... ..-.+++. .++.+|+....
T Consensus 149 ~~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~----- 207 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQN------------NSIGRITN-TGKLEEYPLPTNA---AAPVGITSGNDGALWFVEIM----- 207 (300)
T ss_dssp EEEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEETT-----
T ss_pred eeEEECCCCCEEEEecCC------------CeEEEECC-CCcEEEeeCCCCC---CCcceEEECCCCCEEEEccC-----
Confidence 333333 46788754211 34566787 6666665422111 11223333 35678875421
Q ss_pred cccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEc
Q 010034 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (519)
Q Consensus 259 ~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~G 308 (519)
.+.+++||+ +..+....... ....-.+++.- ++.+|+..
T Consensus 208 -------~~~i~~~~~-~g~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 208 -------GNKIGRITT-TGEISEYDIPT---PNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp -------TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECSTTCEEEEE
T ss_pred -------CCEEEEEcC-CCcEEEEECCC---CCCCceEEEECCCCCEEEec
Confidence 245889998 55555543211 11122333333 46788765
No 59
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.89 E-value=1.4 Score=42.89 Aligned_cols=217 Identities=12% Similarity=0.132 Sum_probs=106.8
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcC-CCcEEeeeecCCCCCCCCCCCCcceeEEE-EeCCeEEEEccccCCcCCCcEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDID-NKLWFQPECTGNGSNGQVGPGPRAFHIAV-AIDCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~l~~~~~~~~~~~~p~~R~~h~~~-~~~~~iyv~GG~~~~~~~~dv~~ 106 (519)
.++.+|+.|-. ..+++ ... -.+|+.+.... +.+-..+.++ .-++.+|+.|.. + .+++
T Consensus 88 ~~~~~~~~g~~------g~i~~-S~DgG~tW~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~~-g-----~v~~ 146 (327)
T 2xbg_A 88 QGNEGWIVGEP------PIMLH-TTDGGQSWSQIPLDP--------KLPGSPRLIKALGNGSAEMITNV-G-----AIYR 146 (327)
T ss_dssp ETTEEEEEEET------TEEEE-ESSTTSSCEECCCCT--------TCSSCEEEEEEEETTEEEEEETT-C-----CEEE
T ss_pred cCCeEEEEECC------CeEEE-ECCCCCCceECcccc--------CCCCCeEEEEEECCCCEEEEeCC-c-----cEEE
Confidence 34678887531 12333 333 46899875321 1111123333 346788887642 1 2443
Q ss_pred EECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECC-CCcEEEeccCCCCCCcccCeeEEE
Q 010034 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEWMQLPVTGSVPPPRCGHTATM 185 (519)
Q Consensus 107 yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~l~~~~~~p~~r~~~~~~~ 185 (519)
-+=.-.+|+.+.. +.+...++++...++.+|++|-. + .+++-+-. -.+|+.+. . +.+...+.++.
T Consensus 147 S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~-G-----~~~~S~d~gG~tW~~~~---~-~~~~~~~~~~~ 212 (327)
T 2xbg_A 147 TKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR-G-----SFYSTWEPGQTAWEPHN---R-TTSRRLHNMGF 212 (327)
T ss_dssp ESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT-S-----SEEEEECTTCSSCEEEE---C-CSSSCEEEEEE
T ss_pred EcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC-C-----cEEEEeCCCCCceeECC---C-CCCCccceeEE
Confidence 3223458999873 22233445555556677776632 1 25554322 57899985 2 23333344444
Q ss_pred e-CCEEEEEcccCCCCCcccccccccccccccC-CCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcccc
Q 010034 186 V-EKRLLIYGGRGGGGPIMGDLWALKGLIEEEN-ETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (519)
Q Consensus 186 ~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~-~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~ 262 (519)
. ++.+|+.+.. + .++..+. ...+|+.+..+ .++.....++++. .++.+|+.|+..
T Consensus 213 ~~~g~~~~~~~~---G----------~~~~s~~D~G~tW~~~~~~-~~~~~~~~~~v~~~~~~~~~~~g~~g-------- 270 (327)
T 2xbg_A 213 TPDGRLWMIVNG---G----------KIAFSDPDNSENWGELLSP-LRRNSVGFLDLAYRTPNEVWLAGGAG-------- 270 (327)
T ss_dssp CTTSCEEEEETT---T----------EEEEEETTEEEEECCCBCT-TSSCCSCEEEEEESSSSCEEEEESTT--------
T ss_pred CCCCCEEEEeCC---c----------eEEEecCCCCCeeEeccCC-cccCCcceEEEEecCCCEEEEEeCCC--------
Confidence 3 5678877631 1 0111111 25578877621 1233222234433 356888887621
Q ss_pred cceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEcc
Q 010034 263 DIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGG 309 (519)
Q Consensus 263 ~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG 309 (519)
.+++-.-...+|+.+.... +.+-..+.++.. ++.+++.|.
T Consensus 271 -----~i~~S~DgG~tW~~~~~~~--~~~~~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 271 -----ALLCSQDGGQTWQQDVDVK--KVPSNFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp -----CEEEESSTTSSCEECGGGT--TSSSCCCEEEEEETTEEEEECS
T ss_pred -----eEEEeCCCCcccEEcCccC--CCCCCeEEEEEECCCceEEEcC
Confidence 2333222357899887431 112223444443 566665553
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.89 E-value=1.3 Score=42.60 Aligned_cols=110 Identities=9% Similarity=-0.147 Sum_probs=59.5
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.|+.+ ..+.+||+.+.+-...-. ..... -.+++.. +++.++.|+.++ .+.+|
T Consensus 42 ~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~---------~h~~~-v~~~~~~~~~~~l~s~~~dg-----~i~iw 101 (369)
T 3zwl_B 42 KEGDLLFSCSKD-----SSASVWYSLNGERLGTLD---------GHTGT-IWSIDVDCFTKYCVTGSADY-----SIKLW 101 (369)
T ss_dssp TTSCEEEEEESS-----SCEEEEETTTCCEEEEEC---------CCSSC-EEEEEECTTSSEEEEEETTT-----EEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEeCCCchhhhhhh---------hcCCc-EEEEEEcCCCCEEEEEeCCC-----eEEEE
Confidence 445666666643 358899988776433211 11111 2223333 466777777543 58899
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
|+.+.+-..... ....-.+++...++..++.++.+.......+..||+.+.
T Consensus 102 d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 102 DVSNGQCVATWK-----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp ETTTCCEEEEEE-----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred ECCCCcEEEEee-----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 998877554432 122223344445556666666542222345777776543
No 61
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.89 E-value=1.4 Score=42.88 Aligned_cols=240 Identities=14% Similarity=0.130 Sum_probs=117.2
Q ss_pred ceeEEceeCCCCCCCCCCCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeE
Q 010034 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (519)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~ 81 (519)
.+|+++.. |....-.++....++.+|++|-. ..+++-.=.-.+|+.+.... ........+
T Consensus 25 ~~W~~~~~-------~~~~~~~~v~~~~~~~~~~~G~~------g~i~~s~DgG~tW~~~~~~~-------~~~~~~~~~ 84 (327)
T 2xbg_A 25 NPWEAIQL-------PTTATILDMSFIDRHHGWLVGVN------ATLMETRDGGQTWEPRTLVL-------DHSDYRFNS 84 (327)
T ss_dssp CCEEEEEC-------SCSSCEEEEEESSSSCEEEEETT------TEEEEESSTTSSCEECCCCC-------SCCCCEEEE
T ss_pred CCceEeec-------CCCCcEEEEEECCCCcEEEEcCC------CeEEEeCCCCCCCeECCCCC-------CCCCccEEE
Confidence 36877752 22222233333345678886642 12433322235899875321 011122344
Q ss_pred EEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECC
Q 010034 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (519)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (519)
+...++.+|+.|- .+ .+++-+=.-.+|+.+.....+|. ..+.++...++.+|+.|.. ..+++-+=.
T Consensus 85 i~~~~~~~~~~g~-~g-----~i~~S~DgG~tW~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~------g~v~~S~Dg 150 (327)
T 2xbg_A 85 VSFQGNEGWIVGE-PP-----IMLHTTDGGQSWSQIPLDPKLPG--SPRLIKALGNGSAEMITNV------GAIYRTKDS 150 (327)
T ss_dssp EEEETTEEEEEEE-TT-----EEEEESSTTSSCEECCCCTTCSS--CEEEEEEEETTEEEEEETT------CCEEEESST
T ss_pred EEecCCeEEEEEC-CC-----eEEEECCCCCCceECccccCCCC--CeEEEEEECCCCEEEEeCC------ccEEEEcCC
Confidence 4455678888753 21 23332112468999864212222 2244444556688888742 125544333
Q ss_pred CCcEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEE
Q 010034 162 SLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTI 240 (519)
Q Consensus 162 t~~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~ 240 (519)
-.+|+.+.. +.+..-+.++.. ++.+|++|-. + .++.. -|.....|+.+.. +.+...+.+
T Consensus 151 G~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~-G------~~~~S-----~d~gG~tW~~~~~----~~~~~~~~~ 210 (327)
T 2xbg_A 151 GKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR-G------SFYST-----WEPGQTAWEPHNR----TTSRRLHNM 210 (327)
T ss_dssp TSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT-S------SEEEE-----ECTTCSSCEEEEC----CSSSCEEEE
T ss_pred CCCCEEeec----CCCcceEEEEEcCCCcEEEEECC-C------cEEEE-----eCCCCCceeECCC----CCCCcccee
Confidence 568999862 222223444444 4566666521 1 11121 1333678999862 223333444
Q ss_pred EE-eCCEEEEEeccCCCCCcccccceeCcEEEEEcC-CCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEcc
Q 010034 241 TS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL-SAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGG 309 (519)
Q Consensus 241 ~~-~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~-t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG 309 (519)
+. .++.+|+.+.. ..+++.+.+ ..+|+.+..... +.....++++.. ++.+|+.|+
T Consensus 211 ~~~~~g~~~~~~~~-------------G~~~~s~~D~G~tW~~~~~~~~-~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 211 GFTPDGRLWMIVNG-------------GKIAFSDPDNSENWGELLSPLR-RNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EECTTSCEEEEETT-------------TEEEEEETTEEEEECCCBCTTS-SCCSCEEEEEESSSSCEEEEES
T ss_pred EECCCCCEEEEeCC-------------ceEEEecCCCCCeeEeccCCcc-cCCcceEEEEecCCCEEEEEeC
Confidence 44 45678877641 123444333 568988754211 112223444433 578888876
No 62
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.11 Score=57.43 Aligned_cols=108 Identities=8% Similarity=0.064 Sum_probs=63.7
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eC--CeEEEEccccCCcCCCcEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-ID--CHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~--~~iyv~GG~~~~~~~~dv~~ 106 (519)
++..++.||.+ ..+.+||+....+..+.... .... .-.+++. .+ +..++.|+.++ .+.+
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~-------~h~~-~V~~l~~s~~~~~~~l~s~s~Dg-----~I~v 81 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLT-------GHEG-PVWRVDWAHPKFGTILASCSYDG-----KVLI 81 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEEC-------CCSS-CEEEEEECCTTSCSEEEEEETTS-----CEEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceecc-------CCcC-ceEEEEecCCCCCCEEEEEeCCC-----eEEE
Confidence 45666777654 45788898877777665331 1111 1223333 23 67777887654 4889
Q ss_pred EECCCCeEEEEeeCCCCCCCCC-ccEEEEECC--cEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 107 LDTDIWQWSELTSFGDLPSPRD-FAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 107 yd~~t~~W~~~~~~g~~P~~r~-~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
+|+.++.|..+.. ...... -.+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 82 wd~~~~~~~~~~~---~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 82 WKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp EEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred EECCCCccccccc---ccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 9999998877653 222221 223333333 56788887654 3778887765
No 63
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.82 E-value=1 Score=42.95 Aligned_cols=233 Identities=12% Similarity=-0.014 Sum_probs=114.6
Q ss_pred CcceEEEEEC-CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccC
Q 010034 20 RSGHSAVNIG-KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFG 97 (519)
Q Consensus 20 R~gh~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~ 97 (519)
+.+-+.+-.. ++.+|+.+-.. ..+++||+.++.-..... + .+. .+++.. ++++|+..+
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~----------~-~~~-~~i~~~~dG~l~v~~~--- 72 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPA-----KKVCRWDSFTKQVQRVTM----------D-APV-SSVALRQSGGYVATIG--- 72 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEC----------S-SCE-EEEEEBTTSSEEEEET---
T ss_pred ccccCCeEECCCCEEEEEECCC-----CEEEEEECCCCcEEEEeC----------C-Cce-EEEEECCCCCEEEEEC---
Confidence 3444444443 46788876532 468999999887654431 1 112 233333 567666531
Q ss_pred CcCCCcEEEEECCCCeEEEEeeCCC-CCCCCCccEEEEECCcEEEEEecCCC------CcCCCcEEEEECCCCcEEEecc
Q 010034 98 SRRLGDFWVLDTDIWQWSELTSFGD-LPSPRDFAAASAIGNRKIVMYGGWDG------KKWLSDVYVLDTISLEWMQLPV 170 (519)
Q Consensus 98 ~~~~~dv~~yd~~t~~W~~~~~~g~-~P~~r~~~~~~~~~~~~iyv~GG~~~------~~~~~~v~~yd~~t~~W~~l~~ 170 (519)
+.+++||+.+++++.+..... .+..+ ...+++..++++|+-.-... ......++++|+. .+...+..
T Consensus 73 ----~~l~~~d~~~g~~~~~~~~~~~~~~~~-~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~ 146 (297)
T 3g4e_A 73 ----TKFCALNWKEQSAVVLATVDNDKKNNR-FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD 146 (297)
T ss_dssp ----TEEEEEETTTTEEEEEEECCTTCSSEE-EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE
T ss_pred ----CeEEEEECCCCcEEEEEecCCCCCCCC-CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee
Confidence 468999999999988764211 12122 22344445678776431111 1123468888875 33333321
Q ss_pred CCCCCCcccCeeEEEe--CCEEEEEcccCCCCCcccccccccccccccC--CCCceEEecCCCCCCC-CcceeEEEE-eC
Q 010034 171 TGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEEN--ETPGWTQLKLPGQAPS-SRCGHTITS-GG 244 (519)
Q Consensus 171 ~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~--~t~~W~~i~~~g~~P~-~r~~~s~~~-~~ 244 (519)
.... ...++.. ++.||+..... +.+..||. .++.......-...+. ...-..+++ .+
T Consensus 147 --~~~~---pngi~~spdg~~lyv~~~~~------------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 147 --QVDI---SNGLDWSLDHKIFYYIDSLS------------YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp --EESB---EEEEEECTTSCEEEEEEGGG------------TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred --cccc---ccceEEcCCCCEEEEecCCC------------CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 1111 1233333 34688775421 33444543 5555432110001111 111223444 46
Q ss_pred CEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeC---CEEEEEccCC
Q 010034 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLG---SLYLLFGGFD 311 (519)
Q Consensus 245 ~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~---~~iyv~GG~~ 311 (519)
+.||+..... +.|++||+++.+....-.. |..+ -.+++.-+ +.+||.....
T Consensus 210 G~lwva~~~~------------~~v~~~d~~tG~~~~~i~~---p~~~-~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 210 GKLWVACYNG------------GRVIRLDPVTGKRLQTVKL---PVDK-TTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp SCEEEEEETT------------TEEEEECTTTCCEEEEEEC---SSSB-EEEEEEESGGGCEEEEEEBCT
T ss_pred CCEEEEEcCC------------CEEEEEcCCCceEEEEEEC---CCCC-ceEEEEeCCCCCEEEEEcCCc
Confidence 6788865211 4589999986654432222 2222 22333322 5788876543
No 64
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.79 E-value=0.84 Score=50.10 Aligned_cols=230 Identities=10% Similarity=0.051 Sum_probs=116.1
Q ss_pred EEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCc
Q 010034 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGD 103 (519)
Q Consensus 25 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~d 103 (519)
++...++.|++-. . .-+.+||+.++++........ ........-++++.. ++.|+|- ... .-
T Consensus 378 i~~d~~g~lWigt--~-----~GL~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~i~~d~~g~lWig-T~~-----~G 440 (758)
T 3ott_A 378 IYEDKEQQLWIAT--D-----GSINRYDYATRQFIHYNIVDN----TGTYNTNWTYYIFEDTAGQLWIS-TCL-----GG 440 (758)
T ss_dssp EEECTTSCEEEEE--T-----TEEEEEETTTTEEEEEEEECC----C--CBSSSEEEEEECTTSEEEEE-ESS-----SC
T ss_pred EEECCCCCEEEEe--C-----CcHhhcCcCCCcEEEeecCCC----cCCCCCceEEEEEEcCCCCEEEE-ECC-----Cc
Confidence 3334556777732 1 248999999999887653211 000011222344443 4677773 222 12
Q ss_pred EEEEECCC------CeEE---EEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCC
Q 010034 104 FWVLDTDI------WQWS---ELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSV 174 (519)
Q Consensus 104 v~~yd~~t------~~W~---~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~ 174 (519)
+++||+.+ ..+. .......++.. .-.+++...++.|++.||.. +.+++||+.+++++.+... ..
T Consensus 441 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~-~~ 513 (758)
T 3ott_A 441 IFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFAD-EL 513 (758)
T ss_dssp EEEEEHHHHHHCCSSEEECSEEECGGGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTT-TS
T ss_pred eEEEccccccccCCcceecccccccccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCC-Cc
Confidence 77888653 2232 11111123222 12334444567899876653 3499999999999987522 11
Q ss_pred CCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEecc
Q 010034 175 PPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGH 253 (519)
Q Consensus 175 p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~ 253 (519)
+....-.++... ++.|++-. . +.+.+||+.+++++..... .+|... -.+++..++.|++...
T Consensus 514 ~~~~~~~~i~~d~~g~lWigt-~-------------~Gl~~~~~~~~~~~~~~~~-gl~~~~-i~~i~~~~g~lWi~t~- 576 (758)
T 3ott_A 514 TGEKSPNYLLCDEDGLLWVGF-H-------------GGVMRINPKDESQQSISFG-SFSNNE-ILSMTCVKNSIWVSTT- 576 (758)
T ss_dssp CGGGCEEEEEECTTSCEEEEE-T-------------TEEEEECC--CCCCBCCCC-C---CC-EEEEEEETTEEEEEES-
T ss_pred CCCcccceEEECCCCCEEEEe-c-------------CceEEEecCCCceEEeccc-CCCccc-eEEEEECCCCEEEECC-
Confidence 111111222222 56788632 1 2345678888877665422 344322 2334445778888552
Q ss_pred CCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCC
Q 010034 254 GTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (519)
Q Consensus 254 ~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~ 312 (519)
+.+.+||+.+.+...... |...+..++....+--+.|||.+|
T Consensus 577 -------------~Gl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 577 -------------NGLWIIDRKTMDARQQNM----TNKRFTSLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp -------------SCEEEEETTTCCEEEC------CCCCCSEEEEETTTTEEEEECBSE
T ss_pred -------------CCeEEEcCCCceeEEecC----CCCceeeeEEECCCCcEEEecCCc
Confidence 347999999888765432 222333333232344455677665
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.38 Score=47.59 Aligned_cols=147 Identities=9% Similarity=-0.051 Sum_probs=72.1
Q ss_pred eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
..+..++.|+.++ .+.+||+.+.+-..... . ....-.+++...++..++.|+.++ .+..||+.+.+
T Consensus 215 ~~~~~~~~~~~~g-----~i~~~d~~~~~~~~~~~---~-~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~ 280 (425)
T 1r5m_A 215 VDDDKFVIPGPKG-----AIFVYQITEKTPTGKLI---G-HHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGN 280 (425)
T ss_dssp EETTEEEEECGGG-----CEEEEETTCSSCSEEEC---C-CSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBS
T ss_pred cCCCEEEEEcCCC-----eEEEEEcCCCceeeeec---c-CCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCc
Confidence 3344566666543 58999998764322221 1 111223344445556777777554 37888887754
Q ss_pred EEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-
Q 010034 165 WMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS- 242 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~- 242 (519)
-...- .. ....-.++... ++ +++.|+.. ..+..||+.+.+-...-. ...... .++..
T Consensus 281 ~~~~~---~~-~~~~i~~~~~~~~~-~l~~~~~d------------~~i~i~d~~~~~~~~~~~---~~~~~i-~~~~~s 339 (425)
T 1r5m_A 281 SQNCF---YG-HSQSIVSASWVGDD-KVISCSMD------------GSVRLWSLKQNTLLALSI---VDGVPI-FAGRIS 339 (425)
T ss_dssp CSEEE---CC-CSSCEEEEEEETTT-EEEEEETT------------SEEEEEETTTTEEEEEEE---CTTCCE-EEEEEC
T ss_pred cceEe---cC-CCccEEEEEECCCC-EEEEEeCC------------CcEEEEECCCCcEeEecc---cCCccE-EEEEEc
Confidence 33222 10 11111233333 45 55666543 234556776655333321 111111 22222
Q ss_pred eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCe
Q 010034 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (519)
Q Consensus 243 ~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~ 278 (519)
.++.+++.|+.+ ..+.+||+.+..
T Consensus 340 ~~~~~l~~~~~d------------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 340 QDGQKYAVAFMD------------GQVNVYDLKKLN 363 (425)
T ss_dssp TTSSEEEEEETT------------SCEEEEECHHHH
T ss_pred CCCCEEEEEECC------------CeEEEEECCCCc
Confidence 345666666533 347788876543
No 66
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.93 Score=43.69 Aligned_cols=238 Identities=11% Similarity=0.049 Sum_probs=102.6
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
++..++.|+.+ ..+.+||+.+.+-...-.. +..-.+++.. +++.++.++.+.......+.+||
T Consensus 85 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 85 FTKYCVTGSAD-----YSIKLWDVSNGQCVATWKS-----------PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEEC-----------SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEeec-----------CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEE
Confidence 34455555543 3588889887765443211 1112223332 45666666544222234577777
Q ss_pred CCCCe----EEEEeeCC--C--CCCCC-CccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC-CcEEEeccCCCCCCcc
Q 010034 109 TDIWQ----WSELTSFG--D--LPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS-LEWMQLPVTGSVPPPR 178 (519)
Q Consensus 109 ~~t~~----W~~~~~~g--~--~P~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t-~~W~~l~~~~~~p~~r 178 (519)
+.+.. +....... . ..... ...+++...++..++.|+.++ .+..||+.+ .+-...- ... ..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~---~~~-~~ 219 (369)
T 3zwl_B 149 IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSI---DLH-EK 219 (369)
T ss_dssp EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEE---ECC-SS
T ss_pred ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEE---ecC-CC
Confidence 65432 22211000 0 00110 122233334556777776554 488999987 3322221 111 11
Q ss_pred cCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCC
Q 010034 179 CGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGG 257 (519)
Q Consensus 179 ~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~ 257 (519)
.-.++... ++..++.|+.+ ..+..||..+.+....- ..+.+ ....+...++..+++|+.....
T Consensus 220 ~v~~~~~~~~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~---~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 283 (369)
T 3zwl_B 220 SISDMQFSPDLTYFITSSRD------------TNSFLVDVSTLQVLKKY---ETDCP-LNTAVITPLKEFIILGGGQEAK 283 (369)
T ss_dssp CEEEEEECTTSSEEEEEETT------------SEEEEEETTTCCEEEEE---ECSSC-EEEEEECSSSSEEEEEECCC--
T ss_pred ceeEEEECCCCCEEEEecCC------------ceEEEEECCCCceeeee---cCCCC-ceeEEecCCCceEEEeecCCCc
Confidence 11222332 45566666542 23455677766554433 11111 1112222344555555543321
Q ss_pred Ccccc--cceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCC
Q 010034 258 WLSRY--DIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (519)
Q Consensus 258 ~~~~~--~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~ 312 (519)
..... ..-...+.+||..+..=...-... ...-.++... ++++++.||.++
T Consensus 284 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 284 DVTTTSANEGKFEARFYHKIFEEEIGRVQGH----FGPLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp -----------CEEEEEETTTCCEEEEEECC----SSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEecCCCcceeEEEecCCCcchhheecc----cCcEEEEEECCCCCEEEEEcCCC
Confidence 00000 011125788887665432221111 1111222222 577888888765
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.56 E-value=1.8 Score=41.59 Aligned_cols=227 Identities=9% Similarity=-0.045 Sum_probs=111.3
Q ss_pred cEEEEEcCcCC-CccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeC-CeEEEEccccCCcCCCcEEEEE
Q 010034 31 SKVVVFGGLVD-KRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID-CHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 31 ~~lyv~GG~~~-~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~-~~iyv~GG~~~~~~~~dv~~yd 108 (519)
+.+|+...... ....+.++++|+.+.+-...-..+ .+....++.-+ +.+|+.++.. +.++++|
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d 117 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND----------LKPFGATINNTTQTLWFGNTVN-----SAVTAID 117 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES----------SCCCSEEEETTTTEEEEEETTT-----TEEEEEE
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC----------CCcceEEECCCCCEEEEEecCC-----CEEEEEe
Confidence 46777653211 112467999999887654432211 11122233334 4578776533 3689999
Q ss_pred CCCCeEEEEeeCCCCCC-----CCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCee
Q 010034 109 TDIWQWSELTSFGDLPS-----PRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~-----~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~ 182 (519)
+.+++-...-..+.... +..-++++.-.+ +.+|+.+... -..++.+|+.+.+-...- +.. ...-+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~---~~~-~~~~~~ 189 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI---QNT-GKMSTG 189 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE---CCC-CTTCCC
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe---cCC-CCccce
Confidence 99887533322111111 111233444433 3677766321 234999999888755443 111 111122
Q ss_pred EEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCC
Q 010034 183 ATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGW 258 (519)
Q Consensus 183 ~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~ 258 (519)
++.. ++.+|+... . +.+..+|+.+.+-......+.........+++. .++.+|+....
T Consensus 190 ~~~s~dg~~l~~~~~-~------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----- 251 (353)
T 3vgz_A 190 LALDSEGKRLYTTNA-D------------GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK----- 251 (353)
T ss_dssp CEEETTTTEEEEECT-T------------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----
T ss_pred EEECCCCCEEEEEcC-C------------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----
Confidence 3333 356777543 1 334567887776543321111111112222333 35567776531
Q ss_pred cccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe--CCEEEEEccCC
Q 010034 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFD 311 (519)
Q Consensus 259 ~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~--~~~iyv~GG~~ 311 (519)
.+.+++||+.+.+....-..+. + ..++.. ++.+|+.+..+
T Consensus 252 -------~~~v~~~d~~~~~~~~~~~~~~---~---~~~~~s~dg~~l~v~~~~~ 293 (353)
T 3vgz_A 252 -------AAEVLVVDTRNGNILAKVAAPE---S---LAVLFNPARNEAYVTHRQA 293 (353)
T ss_dssp -------SSEEEEEETTTCCEEEEEECSS---C---CCEEEETTTTEEEEEETTT
T ss_pred -------CCEEEEEECCCCcEEEEEEcCC---C---ceEEECCCCCEEEEEECCC
Confidence 2578999998876654333222 2 123322 45677776433
No 68
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.56 E-value=2.3 Score=42.82 Aligned_cols=211 Identities=12% Similarity=0.056 Sum_probs=102.7
Q ss_pred EEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCC
Q 010034 33 VVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW 112 (519)
Q Consensus 33 lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~ 112 (519)
+++.|+.+ ..+.++|+.+++-...- . .... .-.++..++..++.|+.++ .+.++|+.++
T Consensus 171 ~l~s~~~d-----g~i~vwd~~~~~~~~~~-~--------~h~~--~v~~~~~~~~~l~s~s~dg-----~i~~wd~~~~ 229 (445)
T 2ovr_B 171 IIISGSTD-----RTLKVWNAETGECIHTL-Y--------GHTS--TVRCMHLHEKRVVSGSRDA-----TLRVWDIETG 229 (445)
T ss_dssp EEEEEETT-----SCEEEEETTTTEEEEEE-C--------CCSS--CEEEEEEETTEEEEEETTS-----EEEEEESSSC
T ss_pred EEEEEeCC-----CeEEEEECCcCcEEEEE-C--------CCCC--cEEEEEecCCEEEEEeCCC-----EEEEEECCCC
Confidence 44555433 35778888776532221 0 1111 1122233455566666543 5889998877
Q ss_pred eEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEE
Q 010034 113 QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLI 192 (519)
Q Consensus 113 ~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv 192 (519)
+-...-. .+ ...-.++.. ++..++.|+.++ .+..||+.+.+-...- .........+..++..++
T Consensus 230 ~~~~~~~---~~--~~~v~~~~~-~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~ 293 (445)
T 2ovr_B 230 QCLHVLM---GH--VAAVRCVQY-DGRRVVSGAYDF-----MVKVWDPETETCLHTL-----QGHTNRVYSLQFDGIHVV 293 (445)
T ss_dssp CEEEEEE---CC--SSCEEEEEE-CSSCEEEEETTS-----CEEEEEGGGTEEEEEE-----CCCSSCEEEEEECSSEEE
T ss_pred cEEEEEc---CC--cccEEEEEE-CCCEEEEEcCCC-----EEEEEECCCCcEeEEe-----cCCCCceEEEEECCCEEE
Confidence 5433221 11 111223334 446677777654 3788898776543322 111112233334666667
Q ss_pred EcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEE
Q 010034 193 YGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIIL 272 (519)
Q Consensus 193 ~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~y 272 (519)
.|+.+ ..+..||..+.+-...-. .... .-.++. .++..++.|+.+ ..+.+|
T Consensus 294 ~~~~d------------~~i~i~d~~~~~~~~~~~--~~~~--~v~~~~-~~~~~l~~~~~d------------g~i~vw 344 (445)
T 2ovr_B 294 SGSLD------------TSIRVWDVETGNCIHTLT--GHQS--LTSGME-LKDNILVSGNAD------------STVKIW 344 (445)
T ss_dssp EEETT------------SCEEEEETTTCCEEEEEC--CCCS--CEEEEE-EETTEEEEEETT------------SCEEEE
T ss_pred EEeCC------------CeEEEEECCCCCEEEEEc--CCcc--cEEEEE-EeCCEEEEEeCC------------CeEEEE
Confidence 77653 234556776655433221 1111 111222 334455666533 457899
Q ss_pred EcCCCeEEE-cccCCCCCCCCcceEEEEeCCEEEEEccCCC
Q 010034 273 DRLSAQWKR-LPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (519)
Q Consensus 273 d~~t~~W~~-v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~ 312 (519)
|+.+.+-.. +... ......-.++..++.+++.|+.++
T Consensus 345 d~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~l~s~~~dg 382 (445)
T 2ovr_B 345 DIKTGQCLQTLQGP---NKHQSAVTCLQFNKNFVITSSDDG 382 (445)
T ss_dssp ETTTCCEEEEECST---TSCSSCEEEEEECSSEEEEEETTS
T ss_pred ECCCCcEEEEEccC---CCCCCCEEEEEECCCEEEEEeCCC
Confidence 987654332 2211 111222333445677888888665
No 69
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.50 E-value=0.61 Score=49.23 Aligned_cols=152 Identities=13% Similarity=0.152 Sum_probs=76.2
Q ss_pred CcEEEEECCCCeEEEEeeCCCC--------CCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCC
Q 010034 102 GDFWVLDTDIWQWSELTSFGDL--------PSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG 172 (519)
Q Consensus 102 ~dv~~yd~~t~~W~~~~~~g~~--------P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~ 172 (519)
+.+.++|..+.+-...-+...+ |.+|. .+++.-. ++.+|+-... ...++.+|..+.+-..+.
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v-~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~--- 318 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV-AAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVT--- 318 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE-EEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEE---
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCce-EEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeE---
Confidence 4578899988764433221111 22232 1222222 3355555432 245889998775422211
Q ss_pred CCCCcccCeeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEe-CCEEEE
Q 010034 173 SVPPPRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLL 249 (519)
Q Consensus 173 ~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~-~~~iyv 249 (519)
..+..+.-+.++.. ++ ++|+.+..+ +.+.++|..+++-...-..+..|.+..+.....- ++.+|+
T Consensus 319 ~i~~~~~~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~ 386 (543)
T 1nir_A 319 SIGAAPFLHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWS 386 (543)
T ss_dssp EEECCSSCCCEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEE
T ss_pred EeccCcCccCceECCCCCEEEEEecCC------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEE
Confidence 11123333444444 44 455544221 4456678888876654333455655444343332 367777
Q ss_pred EeccCCCCCcccccceeCcEEEEEcCCC-----eEEEcccC
Q 010034 250 FGGHGTGGWLSRYDIYYNDTIILDRLSA-----QWKRLPIG 285 (519)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~t~-----~W~~v~~~ 285 (519)
.+.... +.|-++|..+. .|+.+...
T Consensus 387 s~~~~d-----------~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 387 TSHLGD-----------GSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEE
T ss_pred eccCCC-----------ceEEEEEeCCCCCchhcCeEEEEE
Confidence 664332 45778887662 37665553
No 70
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.50 E-value=0.29 Score=45.57 Aligned_cols=210 Identities=9% Similarity=-0.017 Sum_probs=102.4
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCC-CcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDN-KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~-~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++..+++++ -..++++|+.+ .+...+... ............-+++.+++++.... ....+|.+
T Consensus 51 pdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~ 115 (297)
T 2ojh_A 51 PDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTG--------FATICNNDHGISPDGALYAISDKVEF-GKSAIYLL 115 (297)
T ss_dssp TTSSEEEEEE------TTEEEEEESSSCCSCEECCCT--------TCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEE
T ss_pred CCCCEEEEEc------CCeEEEEeCCCCCCceEeccc--------cccccccceEECCCCCEEEEEEeCCC-CcceEEEE
Confidence 4455555554 24799999998 776655321 11112222223335566666553322 23579999
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~ 186 (519)
|..+..-..+.. ... ....+...++ .+++.++.++. ..+|.+|..+.....+. ..+. .. ..+...
T Consensus 116 ~~~~~~~~~~~~----~~~--~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~---~~~~-~~-~~~~~s 181 (297)
T 2ojh_A 116 PSTGGTPRLMTK----NLP--SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVETRLT---HGEG-RN-DGPDYS 181 (297)
T ss_dssp ETTCCCCEECCS----SSS--EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTCCEEECC---CSSS-CE-EEEEEC
T ss_pred ECCCCceEEeec----CCC--ccceEECCCCCEEEEEECCCCc---eEEEEEECCCCcceEcc---cCCC-cc-ccceEC
Confidence 998877555542 111 2233333344 45545544332 35788888888777664 2111 11 222222
Q ss_pred -CCE-EEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCccccc
Q 010034 187 -EKR-LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYD 263 (519)
Q Consensus 187 -~~~-lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~~ 263 (519)
+++ +++.+..... ..++.+++.......+. ..+ .....+.. .+++.+++++...... ....
T Consensus 182 ~dg~~l~~~~~~~~~----------~~i~~~~~~~~~~~~~~---~~~--~~~~~~~~s~dg~~l~~~~~~~~~~-~~~~ 245 (297)
T 2ojh_A 182 PDGRWIYFNSSRTGQ----------MQIWRVRVDGSSVERIT---DSA--YGDWFPHPSPSGDKVVFVSYDADVF-DHPR 245 (297)
T ss_dssp TTSSEEEEEECTTSS----------CEEEEEETTSSCEEECC---CCS--EEEEEEEECTTSSEEEEEEEETTCC-SCCS
T ss_pred CCCCEEEEEecCCCC----------ccEEEECCCCCCcEEEe---cCC--cccCCeEECCCCCEEEEEEcCCCCC-cccc
Confidence 444 4444332221 23444566666666554 111 11122222 3455455554332110 0000
Q ss_pred ceeCcEEEEEcCCCeEEEcc
Q 010034 264 IYYNDTIILDRLSAQWKRLP 283 (519)
Q Consensus 264 ~~~~~v~~yd~~t~~W~~v~ 283 (519)
.....++++|+.+.+...+.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEE
T ss_pred cCceEEEEEecCCCCceeee
Confidence 02356999999887766554
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.44 E-value=0.88 Score=49.84 Aligned_cols=107 Identities=8% Similarity=-0.075 Sum_probs=59.7
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
.++..+++|+.+ +.+.+||..++.....-. ............-+++.++.|+.+ ..+.+||
T Consensus 23 p~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~ 83 (814)
T 3mkq_A 23 PTEPWVLTTLYS-----GRVEIWNYETQVEVRSIQ---------VTETPVRAGKFIARKNWIIVGSDD-----FRIRVFN 83 (814)
T ss_dssp SSSSEEEEEETT-----SEEEEEETTTTEEEEEEE---------CCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCceEEEEe---------cCCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEE
Confidence 345666666643 468899988876433221 111122222223356677777754 3589999
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
..+++....-. .+. ..-.+++...++..++.|+.++ .+..||+.++
T Consensus 84 ~~~~~~~~~~~---~~~-~~v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~ 129 (814)
T 3mkq_A 84 YNTGEKVVDFE---AHP-DYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (814)
T ss_dssp TTTCCEEEEEE---CCS-SCEEEEEECSSSSEEEEEETTS-----EEEEEEGGGT
T ss_pred CCCCcEEEEEe---cCC-CCEEEEEEeCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 99887654331 111 1122333344556666776543 4788888776
No 72
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.39 E-value=0.71 Score=50.22 Aligned_cols=217 Identities=12% Similarity=0.045 Sum_probs=111.3
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCC--------
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGS-------- 98 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~-------- 98 (519)
..|++.++|+...++.....++++|+.+++....... .... ...+.. +++.++++.....
T Consensus 133 SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~----------~~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 133 SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE----------RVKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE----------EECS-CCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc----------Cccc-ceEEEEeCCCEEEEEEECCccccccccc
Confidence 3455666665443333345899999999987764321 1111 122232 5554445444322
Q ss_pred ---cCCCcEEEEECCCCeEE--EEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC------C--cE
Q 010034 99 ---RRLGDFWVLDTDIWQWS--ELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS------L--EW 165 (519)
Q Consensus 99 ---~~~~dv~~yd~~t~~W~--~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t------~--~W 165 (519)
.....++++++.+.+.. .+.. ....+....+...-.+++..+++...+....+.++.+|+.+ . .+
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAE--FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccCCCCEEEEEECCCCcccceEEec--cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 22456999999887632 2221 11112223344444555544444332222357899999876 4 68
Q ss_pred EEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCC---ceEEecCCCCCCCCcceeEEEE
Q 010034 166 MQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP---GWTQLKLPGQAPSSRCGHTITS 242 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~---~W~~i~~~g~~P~~r~~~s~~~ 242 (519)
..+.. ...... ......++.||+.+...... ..+..+|+.+. .|+.+... .+. ..-..+..
T Consensus 280 ~~l~~---~~~~~~-~~~s~dg~~l~~~s~~~~~~---------~~l~~~d~~~~~~~~~~~l~~~--~~~-~~~~~~~~ 343 (710)
T 2xdw_A 280 VKLID---NFEGEY-DYVTNEGTVFTFKTNRHSPN---------YRLINIDFTDPEESKWKVLVPE--HEK-DVLEWVAC 343 (710)
T ss_dssp EEEEC---SSSSCE-EEEEEETTEEEEEECTTCTT---------CEEEEEETTSCCGGGCEEEECC--CSS-CEEEEEEE
T ss_pred EEeeC---CCCcEE-EEEeccCCEEEEEECCCCCC---------CEEEEEeCCCCCcccceeccCC--CCC-CeEEEEEE
Confidence 88762 111111 12222367888886543211 23455677665 58887621 111 12223333
Q ss_pred e-CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCe-EEEcc
Q 010034 243 G-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ-WKRLP 283 (519)
Q Consensus 243 ~-~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~-W~~v~ 283 (519)
. ++.+++...... ...++++|+.+.+ ...+.
T Consensus 344 ~~~~~lv~~~~~~g----------~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 344 VRSNFLVLCYLHDV----------KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp ETTTEEEEEEEETT----------EEEEEEEETTTCCEEEEEC
T ss_pred EcCCEEEEEEEECC----------EEEEEEEECCCCCEEEecC
Confidence 4 677777664332 3568999985443 45544
No 73
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.36 E-value=1.5 Score=43.93 Aligned_cols=108 Identities=8% Similarity=0.007 Sum_probs=58.9
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.|+.+ ..+.+||..+.+-...- . ...... .+++. -++++++.|+.++ .+.++
T Consensus 118 p~~~~l~s~s~D-----g~i~vwd~~~~~~~~~l-~--------~h~~~V-~~v~~~~~~~~l~sgs~D~-----~i~iw 177 (410)
T 1vyh_C 118 PVFSVMVSASED-----ATIKVWDYETGDFERTL-K--------GHTDSV-QDISFDHSGKLLASCSADM-----TIKLW 177 (410)
T ss_dssp SSSSEEEEEESS-----SCEEEEETTTCCCCEEE-C--------CCSSCE-EEEEECTTSSEEEEEETTS-----CCCEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEE-e--------ccCCcE-EEEEEcCCCCEEEEEeCCC-----eEEEE
Confidence 345677777754 35888998876543211 1 111111 22222 2567778888664 36678
Q ss_pred ECCCCeEEEEeeCCCCCCCC-CccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 108 DTDIWQWSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
|+.+.+-... +.... .-.+++...++..++.|+.++ .+..||+.+..-.
T Consensus 178 d~~~~~~~~~-----~~~h~~~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 178 DFQGFECIRT-----MHGHDHNVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTGYCV 227 (410)
T ss_dssp ETTSSCEEEC-----CCCCSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCCEE
T ss_pred eCCCCceeEE-----EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEE
Confidence 8877543221 21111 112233334556777777654 4888998887643
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.36 E-value=0.13 Score=50.76 Aligned_cols=110 Identities=11% Similarity=0.031 Sum_probs=54.2
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
++.+++.|+.+ ..+.+||+.++.|..+.... ..... -.+++.. +++.++.|+.++ .+.+||
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~-------~h~~~-v~~~~~s~~~~~l~s~s~d~-----~v~vwd 83 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFS-------DHDKI-VTCVDWAPKSNRIVTCSQDR-----NAYVYE 83 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBC-------CCSSC-EEEEEECTTTCCEEEEETTS-----SEEEC-
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEe-------cCCce-EEEEEEeCCCCEEEEEeCCC-----eEEEEE
Confidence 45677777654 35778888888887765331 11111 2223332 456777777553 488899
Q ss_pred CCCCe-EEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 109 TDIWQ-WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 109 ~~t~~-W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+.+.. |...... ......-.+++...++..++.|+.++ .+..||+.+.+
T Consensus 84 ~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 133 (377)
T 3dwl_C 84 KRPDGTWKQTLVL--LRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN 133 (377)
T ss_dssp -----CCCCEEEC--CCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC----
T ss_pred cCCCCceeeeeEe--cccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc
Confidence 88876 5444321 11111122233334556777777654 37778877664
No 75
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.33 E-value=2.1 Score=41.04 Aligned_cols=227 Identities=9% Similarity=-0.024 Sum_probs=111.1
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
+.+|+.++.+ +.++++|+.+.+-...-..+.+. .+....+..-+.++.. ++.+|+.+... -..++++|
T Consensus 101 ~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d 170 (353)
T 3vgz_A 101 QTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRK-RTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVD 170 (353)
T ss_dssp TEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCC-CCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEE
T ss_pred CEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCc-cccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEc
Confidence 3477665532 47899999887643322221100 0000111112334443 34677765322 14599999
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~- 186 (519)
+.+.+-..... . ....-+.++...+ +.+|+... -+.+..+|+.+.+-......+..........++..
T Consensus 171 ~~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 171 GGNIKLKTAIQ---N-TGKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp TTTTEEEEEEC---C-CCTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET
T ss_pred CCCCceEEEec---C-CCCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC
Confidence 99886544331 1 1111233444433 35666543 24688999998875443211111111111223333
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccce
Q 010034 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (519)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~ 265 (519)
++.+|+.... -+.+..||+.+.+....-. .+.+ .+.+....++.+|+.+...
T Consensus 241 dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~---~~~~-~~~~~s~dg~~l~v~~~~~----------- 293 (353)
T 3vgz_A 241 ARQRAFITDSK------------AAEVLVVDTRNGNILAKVA---APES-LAVLFNPARNEAYVTHRQA----------- 293 (353)
T ss_dssp TTTEEEEEESS------------SSEEEEEETTTCCEEEEEE---CSSC-CCEEEETTTTEEEEEETTT-----------
T ss_pred CCCEEEEEeCC------------CCEEEEEECCCCcEEEEEE---cCCC-ceEEECCCCCEEEEEECCC-----------
Confidence 4467776422 1456677888877654431 2222 1222222345677765422
Q ss_pred eCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-C-CEEEEEccC
Q 010034 266 YNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-G-SLYLLFGGF 310 (519)
Q Consensus 266 ~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~-~~iyv~GG~ 310 (519)
+.+.++|+.+.+....-.. +....+++.. + ..+|+.+..
T Consensus 294 -~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 294 -GKVSVIDAKSYKVVKTFDT-----PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -TEEEEEETTTTEEEEEEEC-----CSEEEEEEECTTSCEEEEEEEC
T ss_pred -CeEEEEECCCCeEEEEEec-----CCCCCeEEEcCCCCEEEEEEcc
Confidence 5689999988776543322 1222333333 3 457776543
No 76
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.32 E-value=0.62 Score=44.29 Aligned_cols=132 Identities=11% Similarity=0.009 Sum_probs=70.1
Q ss_pred eEEEEECCcEEEEEcCcC--CCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-C-CeEEEEccccCC
Q 010034 23 HSAVNIGKSKVVVFGGLV--DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGS 98 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~--~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~-~~iyv~GG~~~~ 98 (519)
+..+...++.+|+..... .....+.+++||+.++++..+..... .. ....-++++.. + +++|+....
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-----~~-~~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV-----NG-YGGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE-----TT-EECCEEEEEECSSSSEEEEEETT---
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEeccc-----CC-CCCCCceEEEecCCCcEEEEECC---
Confidence 344444567888871100 01112468999999988876542000 00 11112344443 4 688887541
Q ss_pred cCCCcEEEEECCCCeEEEE-eeCCCCCCCCCccEEEEECCcEEEEEecCCC----------CcCCCcEEEEECCCCcEEE
Q 010034 99 RRLGDFWVLDTDIWQWSEL-TSFGDLPSPRDFAAASAIGNRKIVMYGGWDG----------KKWLSDVYVLDTISLEWMQ 167 (519)
Q Consensus 99 ~~~~dv~~yd~~t~~W~~~-~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~----------~~~~~~v~~yd~~t~~W~~ 167 (519)
+.+++||+. ++...+ ...........-+.++...++.+|+...... ......+++||+. .+...
T Consensus 92 ---~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 92 ---LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp ---TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred ---CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 258999998 777665 3211111112234555556678888754321 1123568999987 66655
Q ss_pred e
Q 010034 168 L 168 (519)
Q Consensus 168 l 168 (519)
+
T Consensus 167 ~ 167 (314)
T 1pjx_A 167 V 167 (314)
T ss_dssp E
T ss_pred e
Confidence 4
No 77
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.30 E-value=0.79 Score=49.50 Aligned_cols=194 Identities=10% Similarity=-0.039 Sum_probs=99.0
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEECCCC-eEEEEeeCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSFGDL 123 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t~-~W~~~~~~g~~ 123 (519)
..++++|+.+++-..+... ......-..++. -+++.++++..+.......++++|+.++ ....+.....
T Consensus 235 ~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~- 305 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTG--------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD- 305 (706)
T ss_dssp EEEEEEETTTTEEEECCCC--------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC-
T ss_pred eEEEEEECCCCceEeeccC--------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC-
Confidence 5799999988876554311 011111122222 2555444544443333457999999998 7776642111
Q ss_pred CCCC-CccEEEEEC--CcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe--CC-EEEEEcccC
Q 010034 124 PSPR-DFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EK-RLLIYGGRG 197 (519)
Q Consensus 124 P~~r-~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~ 197 (519)
+... ....++... ++++++.+..++ ...+|.+|........+. ...... .....+ ++ .||+.+...
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~---~~~~~v--~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVT---KGEWEV--TNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECC---CSSSCE--EEEEEECTTSSEEEEEESSS
T ss_pred CCeECccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecC---CCCeEE--EeeeEEcCCCCEEEEEecCC
Confidence 1000 012233444 667666665543 356888997777777764 211111 111222 33 566655432
Q ss_pred CCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcccccceeCcEEEEEcCC
Q 010034 198 GGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (519)
Q Consensus 198 ~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t 276 (519)
... ...++.+|..+...+.+.. ... -+++.. -+++.+++...+.. ....++++|+.+
T Consensus 378 ~~~--------~~~l~~~d~~~~~~~~l~~-----~~~-~~~~~~spdg~~l~~~~~~~~--------~p~~i~l~d~~~ 435 (706)
T 2z3z_A 378 SPL--------ERHFYCIDIKGGKTKDLTP-----ESG-MHRTQLSPDGSAIIDIFQSPT--------VPRKVTVTNIGK 435 (706)
T ss_dssp CTT--------CBEEEEEETTCCCCEESCC-----SSS-EEEEEECTTSSEEEEEEECSS--------CSCEEEEEESSS
T ss_pred CCc--------eEEEEEEEcCCCCceeccC-----CCc-eEEEEECCCCCEEEEEecCCC--------CCcEEEEEECCC
Confidence 211 1234555777777666541 111 233333 45555555543321 235689999887
Q ss_pred Ce
Q 010034 277 AQ 278 (519)
Q Consensus 277 ~~ 278 (519)
.+
T Consensus 436 ~~ 437 (706)
T 2z3z_A 436 GS 437 (706)
T ss_dssp CE
T ss_pred Ce
Confidence 76
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.21 E-value=2.4 Score=40.95 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=56.2
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.|+.+ ..+.+||+.+.++....... .....-.+++.. +++.++.|+.++ .+.+|
T Consensus 62 ~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~ 123 (372)
T 1k8k_C 62 PDSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVIL--------RINRAARCVRWAPNEKKFAVGSGSR-----VISIC 123 (372)
T ss_dssp TTTTEEEEEETT-----SCEEEEEEETTEEEEEEECC--------CCSSCEEEEEECTTSSEEEEEETTS-----SEEEE
T ss_pred CCCCEEEEEcCC-----CeEEEEECCCCeeeeeEEee--------cCCCceeEEEECCCCCEEEEEeCCC-----EEEEE
Confidence 345566666543 35888999888776553221 111122233332 566777777543 36666
Q ss_pred ECCCCe-EEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECC
Q 010034 108 DTDIWQ-WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (519)
Q Consensus 108 d~~t~~-W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (519)
|..+.. |...... ..+....-.+++...++..++.|+.++ .+..||+.
T Consensus 124 d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~ 172 (372)
T 1k8k_C 124 YFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIFSAY 172 (372)
T ss_dssp EEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEECC
T ss_pred EecCCCcceeeeee-ecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEEEcc
Confidence 665543 3322210 111122223334445567777887654 37888854
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.21 E-value=1.3 Score=44.36 Aligned_cols=189 Identities=13% Similarity=0.063 Sum_probs=82.7
Q ss_pred EEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECC
Q 010034 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (519)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (519)
++..++.+.+.|+.++ .+..+|..+......... .... .........++..++.|+.++. +.++|..
T Consensus 194 ~~s~~~~~l~sgs~d~-----~i~~~d~~~~~~~~~~~~--~h~~-~~~~~~~~~~g~~l~s~~~D~~-----v~i~~~~ 260 (420)
T 4gga_A 194 SLSWNSYILSSGSRSG-----HIHHHDVRVAEHHVATLS--GHSQ-EVCGLRWAPDGRHLASGGNDNL-----VNVWPSA 260 (420)
T ss_dssp EEEEETTEEEEEETTS-----EEEEEETTSSSCEEEEEE--CCSS-CEEEEEECTTSSEEEEEETTSC-----EEEEESS
T ss_pred EEeeCCCEEEEEeCCC-----ceeEeeecccceeeEEec--cccc-ceeeeeecCCCCeeeeeecccc-----ceEEeec
Confidence 3445667777776553 467777765443222210 1111 1122222344566666665543 6677766
Q ss_pred CCcEE--EeccCCCCCCcccC-eeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcc
Q 010034 162 SLEWM--QLPVTGSVPPPRCG-HTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRC 236 (519)
Q Consensus 162 t~~W~--~l~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~ 236 (519)
+.+-. .+. ........ .+++.. +..+++.||.+.+ ..+..||..++.-...- .......
T Consensus 261 ~~~~~~~~~~---~~~~~~~~V~~~~~~p~~~~~la~~~gs~D----------~~I~iwd~~t~~~~~~~---~~~~~v~ 324 (420)
T 4gga_A 261 PGEGGWVPLQ---TFTQHQGAVKAVAWCPWQSNVLATGGGTSD----------RHIRIWNVCSGACLSAV---DAHSQVC 324 (420)
T ss_dssp CCSSCSCCSE---EECCCSSCEEEEEECTTCTTEEEEEECTTT----------CEEEEEETTTTEEEEEE---ECSSCEE
T ss_pred cccccceeee---eecccCCceeeeeeCCCcccEEEEEeecCC----------CEEEEEeCCccccceee---cccccee
Confidence 54311 111 00001111 122222 3445544432222 23455677776544433 1112222
Q ss_pred eeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCC
Q 010034 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (519)
Q Consensus 237 ~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~ 313 (519)
.......++.+++.+|... +.+.+||..+.+ .+..... -..+..+.+..-++.+++.||.++.
T Consensus 325 ~~~~~~~~~~lv~~sg~~d-----------~~I~iwd~~~~~--~v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 325 SILWSPHYKELISGHGFAQ-----------NQLVIWKYPTMA--KVAELKG-HTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp EEEEETTTTEEEEEECTTT-----------CCEEEEETTTCC--EEEEECC-CSSCEEEEEECTTSSCEEEEETTTE
T ss_pred eeeecCCCCeEEEEEecCC-----------CEEEEEECCCCc--EEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCe
Confidence 2222224556666666443 458889987644 2222110 0112222222225778888887653
No 80
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.20 E-value=1.6 Score=42.44 Aligned_cols=158 Identities=9% Similarity=0.075 Sum_probs=82.6
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEE
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~ 106 (519)
..++.+++.||.+ ..+.++|..++.|........ ... ..-.+++. -+++.++.|+.++ .+.+
T Consensus 25 sp~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~------~h~-~~v~~~~~sp~g~~l~s~s~D~-----~v~i 87 (345)
T 3fm0_A 25 NPAGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSE------GHQ-RTVRKVAWSPCGNYLASASFDA-----TTCI 87 (345)
T ss_dssp CTTSSCEEEEETT-----SCEEEEEEETTEEEEEEEECS------SCS-SCEEEEEECTTSSEEEEEETTS-----CEEE
T ss_pred CCCCCEEEEEcCC-----CeEEEEEcCCCcceeeeeecc------ccC-CcEEEEEECCCCCEEEEEECCC-----cEEE
Confidence 3456777778754 347788988888765432210 111 11222222 2567777777654 4678
Q ss_pred EECCCCeEEEEeeCCCCCCCC-CccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc-EEEeccCCCCCCcccCee-E
Q 010034 107 LDTDIWQWSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE-WMQLPVTGSVPPPRCGHT-A 183 (519)
Q Consensus 107 yd~~t~~W~~~~~~g~~P~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~l~~~~~~p~~r~~~~-~ 183 (519)
+|..+..+..+.. +.... .-.+++...++.+++.|+.++. +..+|+.+.. +..+.. +........ +
T Consensus 88 w~~~~~~~~~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D~~-----v~iwd~~~~~~~~~~~~---~~~h~~~v~~~ 156 (345)
T 3fm0_A 88 WKKNQDDFECVTT---LEGHENEVKSVAWAPSGNLLATCSRDKS-----VWVWEVDEEDEYECVSV---LNSHTQDVKHV 156 (345)
T ss_dssp EEECCC-EEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSC-----EEEEEECTTSCEEEEEE---ECCCCSCEEEE
T ss_pred EEccCCCeEEEEE---ccCCCCCceEEEEeCCCCEEEEEECCCe-----EEEEECCCCCCeEEEEE---ecCcCCCeEEE
Confidence 8888777665442 21111 1123333356677888877653 7788876543 333321 111111112 2
Q ss_pred EEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEe
Q 010034 184 TMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL 225 (519)
Q Consensus 184 ~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i 225 (519)
+.. ++.+++.|+.++ .+..||..++.|...
T Consensus 157 ~~~p~~~~l~s~s~d~------------~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 157 VWHPSQELLASASYDD------------TVKLYREEEDDWVCC 187 (345)
T ss_dssp EECSSSSCEEEEETTS------------CEEEEEEETTEEEEE
T ss_pred EECCCCCEEEEEeCCC------------cEEEEEecCCCEEEE
Confidence 222 456666666432 344567777777654
No 81
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.10 E-value=1.5 Score=42.32 Aligned_cols=103 Identities=10% Similarity=-0.040 Sum_probs=53.5
Q ss_pred cEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCC
Q 010034 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSP 126 (519)
Q Consensus 47 ~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~ 126 (519)
.+|.+|..++++..+..... ...| ...++.-++++|+.+...+ -..+++||+.+++++.+... ....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~------~~~p--~~~a~spdg~l~~~~~~~~---~~~v~~~~~~~g~~~~~~~~--~~~~ 85 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAA------TQNP--TYLALSAKDCLYSVDKEDD---EGGIAAWQIDGQTAHKLNTV--VAPG 85 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEE------CSCC--CCEEECTTCEEEEEEEETT---EEEEEEEEEETTEEEEEEEE--EEES
T ss_pred EEEEEcCCCCeEEEeeeeec------cCCc--ceEEEccCCeEEEEEecCC---CceEEEEEecCCcEEEeeee--ecCC
Confidence 47777888888877543211 1111 1222223667777654311 14589999988888776531 0011
Q ss_pred CCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECC-CCcEEE
Q 010034 127 RDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTI-SLEWMQ 167 (519)
Q Consensus 127 r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~ 167 (519)
..-..++.-.++ .+|+.+..+ ..+..||+. +.+...
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHK-----GTAEVMKIAADGALTL 123 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTT-----TEEEEEEECTTSCEEE
T ss_pred CCCEEEEECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeee
Confidence 112234444444 566655322 347777774 334433
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.07 E-value=3.2 Score=41.68 Aligned_cols=210 Identities=12% Similarity=0.038 Sum_probs=102.2
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~ 125 (519)
..+.+||+.+.+-...-.. .. ..-.++..++..++.|+.++ .+.+||+.+.+-...-. .+.
T Consensus 219 g~i~~wd~~~~~~~~~~~~---------~~--~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~---~~~ 279 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMG---------HV--AAVRCVQYDGRRVVSGAYDF-----MVKVWDPETETCLHTLQ---GHT 279 (445)
T ss_dssp SEEEEEESSSCCEEEEEEC---------CS--SCEEEEEECSSCEEEEETTS-----CEEEEEGGGTEEEEEEC---CCS
T ss_pred CEEEEEECCCCcEEEEEcC---------Cc--ccEEEEEECCCEEEEEcCCC-----EEEEEECCCCcEeEEec---CCC
Confidence 4578889887653322110 11 11223334677777777653 48899988775433221 111
Q ss_pred CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccc
Q 010034 126 PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGD 205 (519)
Q Consensus 126 ~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d 205 (519)
..-.++.. ++..++.|+.++ .+..||+.+.+-...- . ...........++..++.|+.+
T Consensus 280 --~~v~~~~~-~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~---~--~~~~~v~~~~~~~~~l~~~~~d-------- 338 (445)
T 2ovr_B 280 --NRVYSLQF-DGIHVVSGSLDT-----SIRVWDVETGNCIHTL---T--GHQSLTSGMELKDNILVSGNAD-------- 338 (445)
T ss_dssp --SCEEEEEE-CSSEEEEEETTS-----CEEEEETTTCCEEEEE---C--CCCSCEEEEEEETTEEEEEETT--------
T ss_pred --CceEEEEE-CCCEEEEEeCCC-----eEEEEECCCCCEEEEE---c--CCcccEEEEEEeCCEEEEEeCC--------
Confidence 11223334 445667777654 3889999887644332 1 1111122333345556666543
Q ss_pred cccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcc-c
Q 010034 206 LWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP-I 284 (519)
Q Consensus 206 ~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~-~ 284 (519)
..+..||+.+.+-...- .+.... .....++..++.+++.|+.+ ..+.+||+.+.+....- .
T Consensus 339 ----g~i~vwd~~~~~~~~~~-~~~~~~-~~~v~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~ 400 (445)
T 2ovr_B 339 ----STVKIWDIKTGQCLQTL-QGPNKH-QSAVTCLQFNKNFVITSSDD------------GTVKLWDLKTGEFIRNLVT 400 (445)
T ss_dssp ----SCEEEEETTTCCEEEEE-CSTTSC-SSCEEEEEECSSEEEEEETT------------SEEEEEETTTCCEEEEEEE
T ss_pred ----CeEEEEECCCCcEEEEE-ccCCCC-CCCEEEEEECCCEEEEEeCC------------CeEEEEECCCCceeeeeec
Confidence 23455677665433222 011111 11122233456666666643 45889998877654322 1
Q ss_pred CCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 285 GNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 285 ~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
....+..-.-.++... ++.+++.|+.++.
T Consensus 401 ~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 401 LESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp CTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred cccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 1100111112222333 4566677877664
No 83
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.02 E-value=1.7 Score=47.27 Aligned_cols=211 Identities=13% Similarity=-0.009 Sum_probs=104.0
Q ss_pred ccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCC
Q 010034 43 RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (519)
Q Consensus 43 ~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~ 122 (519)
.....+|+.+.....|..+-....-. .............-+++.++++...++.....++++|+.+++......
T Consensus 95 ~~~~~l~~~~~~~~~~~~lld~~~l~---~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--- 168 (710)
T 2xdw_A 95 QNQRVLYVQDSLEGEARVFLDPNILS---DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--- 168 (710)
T ss_dssp CSSCEEEEESSTTSCCEEEECGGGGC---TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE---
T ss_pred ceEEEEEEEcCCCCCcEEEECHHHhc---cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc---
Confidence 34457888887777787653210000 000001111222225666666544433333479999999999876542
Q ss_pred CCCCCCccEEEEECCcEEEEEecCCCC-----------cCCCcEEEEECCCCcEE--EeccCCCCCCcccCeeEEEe-CC
Q 010034 123 LPSPRDFAAASAIGNRKIVMYGGWDGK-----------KWLSDVYVLDTISLEWM--QLPVTGSVPPPRCGHTATMV-EK 188 (519)
Q Consensus 123 ~P~~r~~~~~~~~~~~~iyv~GG~~~~-----------~~~~~v~~yd~~t~~W~--~l~~~~~~p~~r~~~~~~~~-~~ 188 (519)
+... ..+.+...+++.++++..+.. .....++++++.+.+.. .+. . ....+......... ++
T Consensus 169 -~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~-~-~~~~~~~~~~~~~SpDg 244 (710)
T 2xdw_A 169 -ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA-E-FPDEPKWMGGAELSDDG 244 (710)
T ss_dssp -EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE-C-CTTCTTCEEEEEECTTS
T ss_pred -cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe-c-cCCCCeEEEEEEEcCCC
Confidence 1111 223344445544444443322 23456999999887642 222 1 11112222222222 44
Q ss_pred E-EEEEcccCCCCCcccccccccccccccCCC------C--ceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCc
Q 010034 189 R-LLIYGGRGGGGPIMGDLWALKGLIEEENET------P--GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWL 259 (519)
Q Consensus 189 ~-lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t------~--~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~ 259 (519)
+ |++....... .. +.++.+|..+ . .+..+... ... ........++.+|+.+....
T Consensus 245 ~~l~~~~~~~~~--~~------~~l~~~d~~~~~~~~~~~~~~~~l~~~---~~~-~~~~~s~dg~~l~~~s~~~~---- 308 (710)
T 2xdw_A 245 RYVLLSIREGCD--PV------NRLWYCDLQQESNGITGILKWVKLIDN---FEG-EYDYVTNEGTVFTFKTNRHS---- 308 (710)
T ss_dssp CEEEEEEECSSS--SC------CEEEEEEGGGSSSSSCSSCCCEEEECS---SSS-CEEEEEEETTEEEEEECTTC----
T ss_pred CEEEEEEEccCC--Cc------cEEEEEECcccccccCCccceEEeeCC---CCc-EEEEEeccCCEEEEEECCCC----
Confidence 4 4444332211 01 3344456654 3 57777621 111 12223345778888875432
Q ss_pred ccccceeCcEEEEEcCCC---eEEEccc
Q 010034 260 SRYDIYYNDTIILDRLSA---QWKRLPI 284 (519)
Q Consensus 260 ~~~~~~~~~v~~yd~~t~---~W~~v~~ 284 (519)
....++++|+.+. .|+.+..
T Consensus 309 -----~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 309 -----PNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp -----TTCEEEEEETTSCCGGGCEEEEC
T ss_pred -----CCCEEEEEeCCCCCcccceeccC
Confidence 2357899998765 5887754
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.98 E-value=2.3 Score=41.62 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=57.6
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCCCc------EEeeeecCCCCCCCCCC--CCcceeEEEEe-----CCeE-EEEccccC
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDNKL------WFQPECTGNGSNGQVGP--GPRAFHIAVAI-----DCHM-FIFGGRFG 97 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~~~------W~~l~~~~~~~~~~~~p--~~R~~h~~~~~-----~~~i-yv~GG~~~ 97 (519)
.+++.|+.+ ..+.+||+.+.. +..+... ... .. .-.+++.. ++.. ++.|+.++
T Consensus 82 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~v~~~~~~~~~~~~~~~~l~~~~~dg 148 (397)
T 1sq9_A 82 CLVATTSFS-----GDLLFYRITREDETKKVIFEKLDLL-------DSDMKKH-SFWALKWGASNDRLLSHRLVATDVKG 148 (397)
T ss_dssp EEEEEEETT-----SCEEEEEEEECTTTCCEEEEEECCS-------CTTGGGS-CEEEEEEECCC----CEEEEEEETTS
T ss_pred cEEEEEcCC-----CCEEEEEccCCcccccccceeeccc-------ccccCCC-cEEEEEEeeccCCCCceEEEEEeCCC
Confidence 677777654 457888887766 6665421 000 11 22333333 4556 77777553
Q ss_pred CcCCCcEEEEECCC------Ce---EE---EEee--CCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 98 SRRLGDFWVLDTDI------WQ---WS---ELTS--FGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 98 ~~~~~dv~~yd~~t------~~---W~---~~~~--~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
.+.+||+.+ .. |. .+.. .........-.+++...++ +++.|+.++ .+..||+.+.
T Consensus 149 -----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~ 217 (397)
T 1sq9_A 149 -----TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTL 217 (397)
T ss_dssp -----CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTT
T ss_pred -----cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCC
Confidence 477777765 21 21 1110 0001112223444555666 777777554 4889999887
Q ss_pred cEEE
Q 010034 164 EWMQ 167 (519)
Q Consensus 164 ~W~~ 167 (519)
+-..
T Consensus 218 ~~~~ 221 (397)
T 1sq9_A 218 RPLY 221 (397)
T ss_dssp EEEE
T ss_pred ceeE
Confidence 6443
No 85
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.98 E-value=1.2 Score=47.64 Aligned_cols=198 Identities=11% Similarity=-0.021 Sum_probs=106.3
Q ss_pred CCcEEEEEcCC------CcEEeee-ecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCc---CCCcEEEEECC-CC-
Q 010034 45 LSDVVVYDIDN------KLWFQPE-CTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSR---RLGDFWVLDTD-IW- 112 (519)
Q Consensus 45 ~~~~~~yd~~~------~~W~~l~-~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~---~~~dv~~yd~~-t~- 112 (519)
..+++++|+.+ .....+. .. + .........-+++..++....... ...+++++|+. ++
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~---------~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDA---------H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSC---------S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred eeEEEEEECCCCccccCCceeEEEecC---------C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 35799999988 6655553 11 1 111111222355544444433211 12579999999 57
Q ss_pred --eEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCC-CCCCccc---CeeEEEe
Q 010034 113 --QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG-SVPPPRC---GHTATMV 186 (519)
Q Consensus 113 --~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~-~~p~~r~---~~~~~~~ 186 (519)
....+.. .. .......+...++++|+.+..++ ...++++|+.+.+++.+.... ....+.. ....+..
T Consensus 230 ~~~~~~l~~---~~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~ 302 (662)
T 3azo_A 230 FADTRTLLG---GP-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL 302 (662)
T ss_dssp EEEEEEEEE---ET-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC
T ss_pred ccccEEeCC---CC-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEe
Confidence 4555542 11 11223333345667777776543 246999999999999886311 0001111 1223333
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEE-EEeCCEEEEEeccCCCCCcccccc
Q 010034 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTI-TSGGHYLLLFGGHGTGGWLSRYDI 264 (519)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~-~~~~~~iyv~GG~~~~~~~~~~~~ 264 (519)
++++++.+.. .. ..++.+|..++....+.. +.. ...++ ...++.+++..+...
T Consensus 303 ~~~~~~~~~~~-~~----------~~l~~~d~~~~~~~~l~~----~~~-~~~~~~s~~~~~~~~~~~~~~--------- 357 (662)
T 3azo_A 303 ANGLIAVVHGK-GA----------AVLGILDPESGELVDAAG----PWT-EWAATLTVSGTRAVGVAASPR--------- 357 (662)
T ss_dssp TTSCEEEEEBS-SS----------CEEEEEETTTTEEEECCS----SCC-EEEEEEEEETTEEEEEEEETT---------
T ss_pred CCCEEEEEEEc-Cc----------cEEEEEECCCCcEEEecC----CCC-eEEEEEecCCCEEEEEEcCCC---------
Confidence 5677766554 21 334455777777776652 111 11223 345666666654332
Q ss_pred eeCcEEEEEcCCCeEEEccc
Q 010034 265 YYNDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 265 ~~~~v~~yd~~t~~W~~v~~ 284 (519)
....+|.+|+.+.+.+.+..
T Consensus 358 ~~~~i~~~d~~~g~~~~l~~ 377 (662)
T 3azo_A 358 TAYEVVELDTVTGRARTIGA 377 (662)
T ss_dssp EEEEEEEEETTTCCEEEEES
T ss_pred CCCEEEEEECCCCceEEeec
Confidence 34578999998888887754
No 86
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.97 E-value=1.5 Score=47.17 Aligned_cols=194 Identities=9% Similarity=-0.079 Sum_probs=93.2
Q ss_pred CcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC-cEEEeccCCCCC-Cccc
Q 010034 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL-EWMQLPVTGSVP-PPRC 179 (519)
Q Consensus 102 ~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l~~~~~~p-~~r~ 179 (519)
..++++|+.+++-..+.. .......-...+...+++.++++..+.......++.+|+.+. ....+....... ....
T Consensus 235 ~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQT--GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEECCC--CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEeecc--CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 569999999987665542 011111112233335555555554444334467999999998 776664211100 0001
Q ss_pred CeeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEe-CCEEEEEeccCCC
Q 010034 180 GHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTG 256 (519)
Q Consensus 180 ~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~-~~~iyv~GG~~~~ 256 (519)
......- ++++++.+..++. ..++.+|........+. ..........+..- ++.|++.+.....
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~----------~~l~~~~~~~~~~~~l~---~~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGW----------NHLYLYDTTGRLIRQVT---KGEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSS----------CEEEEEETTSCEEEECC---CSSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred CCceeecCCCCEEEEEEccCCc----------cEEEEEECCCCEEEecC---CCCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 1122223 5675555543221 33455566666666664 11111211112222 3456655543221
Q ss_pred CCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCCCCCccceEEecCC
Q 010034 257 GWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGKSTFGDIWWLVPE 325 (519)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~~~~~D~w~l~~~ 325 (519)
....+|.+|..+.....+... . ..+++... +++.+++...+. ....++|.++..
T Consensus 380 --------~~~~l~~~d~~~~~~~~l~~~-----~-~~~~~~~spdg~~l~~~~~~~-~~p~~i~l~d~~ 434 (706)
T 2z3z_A 380 --------LERHFYCIDIKGGKTKDLTPE-----S-GMHRTQLSPDGSAIIDIFQSP-TVPRKVTVTNIG 434 (706)
T ss_dssp --------TCBEEEEEETTCCCCEESCCS-----S-SEEEEEECTTSSEEEEEEECS-SCSCEEEEEESS
T ss_pred --------ceEEEEEEEcCCCCceeccCC-----C-ceEEEEECCCCCEEEEEecCC-CCCcEEEEEECC
Confidence 234689999988776666531 1 12333322 455555554332 223445555443
No 87
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.95 E-value=2.2 Score=41.77 Aligned_cols=177 Identities=11% Similarity=0.046 Sum_probs=85.2
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+++.++.|+.++ .+.++|+.+++-...- ..+... -.+++...+ ..+++.|+.++. +..||+.+.+
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~~---~~h~~~-V~~~~~~~~~~~~l~s~s~D~~-----v~iwd~~~~~ 203 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSSY---RAHAAQ-VTCVAASPHKDSVFLSCSEDNR-----ILLWDTRCPK 203 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEE---CCCSSC-EEEEEECSSCTTEEEEEETTSC-----EEEEETTSSS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEE---cCcCCc-eEEEEecCCCCCceeeeccccc-----cccccccccc
Confidence 567777777654 4889999987643322 111111 122222223 257777876653 8889998876
Q ss_pred EEEeccCCCCCCcccCe-eEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceE-EecCCCCCCCCcceeEE
Q 010034 165 WMQLPVTGSVPPPRCGH-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPGQAPSSRCGHTI 240 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~-~i~~~g~~P~~r~~~s~ 240 (519)
-...- ......... +++.. ++++++.|+.++ .+..||..+.+-. .+. ... ..-.++
T Consensus 204 ~~~~~---~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------------~v~~wd~~~~~~~~~~~---~h~--~~v~~v 263 (344)
T 4gqb_B 204 PASQI---GCSAPGYLPTSLAWHPQQSEVFVFGDENG------------TVSLVDTKSTSCVLSSA---VHS--QCVTGL 263 (344)
T ss_dssp CEEEC---C----CCCEEEEEECSSCTTEEEEEETTS------------EEEEEESCC--CCEEEE---CCS--SCEEEE
T ss_pred eeeee---ecceeeccceeeeecCCCCcceEEeccCC------------cEEEEECCCCcEEEEEc---CCC--CCEEEE
Confidence 44332 111111111 22222 456777776532 2444566554321 111 011 111122
Q ss_pred EEe--CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe--CCEEEEEccCCCC
Q 010034 241 TSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFDGK 313 (519)
Q Consensus 241 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~--~~~iyv~GG~~~~ 313 (519)
+.. +.++++.|+.+ ..|.++|..+.+-..+... ...-.+++.. +..+++.||.++.
T Consensus 264 ~fsp~g~~~lasgs~D------------~~i~vwd~~~~~~~~~~~H-----~~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 264 VFSPHSVPFLASLSED------------CSLAVLDSSLSELFRSQAH-----RDFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp EECSSSSCCEEEEETT------------SCEEEECTTCCEEEEECCC-----SSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEccCCCeEEEEEeCC------------CeEEEEECCCCcEEEEcCC-----CCCEEEEEEeCCCCeEEEEEcCCCe
Confidence 332 23556666543 3477888877654433221 1122233332 3457778887664
No 88
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.93 E-value=2.9 Score=40.44 Aligned_cols=177 Identities=13% Similarity=0.043 Sum_probs=86.7
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++. ++.|+.+ ..+.++|+.+++-...-. .+.. .-.+++...++.+++.|+.++. +..||+.+.+-
T Consensus 154 ~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~~---~h~~-~v~~~~~~~~~~~l~sg~~d~~-----v~~wd~~~~~~ 218 (340)
T 1got_B 154 DNQ-IVTSSGD-----TTCALWDIETGQQTTTFT---GHTG-DVMSLSLAPDTRLFVSGACDAS-----AKLWDVREGMC 218 (340)
T ss_dssp TTE-EEEEETT-----SCEEEEETTTTEEEEEEC---CCSS-CEEEEEECTTSSEEEEEETTSC-----EEEEETTTCSE
T ss_pred CCc-EEEEECC-----CcEEEEECCCCcEEEEEc---CCCC-ceEEEEECCCCCEEEEEeCCCc-----EEEEECCCCee
Confidence 455 4555543 348899999886543321 1111 1233344456678888887653 88899887754
Q ss_pred EEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcce-eEEEE-
Q 010034 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG-HTITS- 242 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~-~s~~~- 242 (519)
...- . .. ...-.+++.. ++..++.|+.++ .+..||..+..-...- ..+..... .++..
T Consensus 219 ~~~~-~-~h--~~~v~~v~~~p~~~~l~s~s~d~------------~v~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s 279 (340)
T 1got_B 219 RQTF-T-GH--ESDINAICFFPNGNAFATGSDDA------------TCRLFDLRADQELMTY---SHDNIICGITSVSFS 279 (340)
T ss_dssp EEEE-C-CC--SSCEEEEEECTTSSEEEEEETTS------------CEEEEETTTTEEEEEE---CCTTCCSCEEEEEEC
T ss_pred EEEE-c-CC--cCCEEEEEEcCCCCEEEEEcCCC------------cEEEEECCCCcEEEEE---ccCCcccceEEEEEC
Confidence 4322 0 11 1111222232 566777776532 3444666665432221 11111111 12222
Q ss_pred eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEE-EcccCCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK-RLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 243 ~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~-~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
.++.+++.|+.+ ..+.+||..+..-. .+... ...-.++... ++..++.||.++.
T Consensus 280 ~~g~~l~~g~~d------------~~i~vwd~~~~~~~~~~~~h-----~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 280 KSGRLLLAGYDD------------FNCNVWDALKADRAGVLAGH-----DNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTSSEEEEEETT------------SEEEEEETTTCCEEEEEECC-----SSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCCEEEEECCC------------CeEEEEEcccCcEeeEeecC-----CCcEEEEEEcCCCCEEEEEcCCcc
Confidence 456677777643 35788887654322 22211 1111222222 5677778876653
No 89
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.88 E-value=1.3 Score=43.65 Aligned_cols=178 Identities=15% Similarity=0.041 Sum_probs=86.5
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+++.++.|+.++ .+.++|..+++-...-. .+... -.+++...+ ..+++.||.++. +..||+.+.+
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~~~---~h~~~-v~~v~~s~~~~~~~~s~~~dg~-----v~~wd~~~~~ 215 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKSYN---AHSSE-VNCVAACPGKDTIFLSCGEDGR-----ILLWDTRKPK 215 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSSC-EEEEEECTTCSSCEEEEETTSC-----EEECCTTSSS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CCCCC-EEEEEEccCCCceeeeeccCCc-----eEEEECCCCc
Confidence 567777777654 48899999886544321 11111 122222223 246777776543 7788887765
Q ss_pred EEEeccCCCCCCcccCeeEEEe---CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEE
Q 010034 165 WMQLPVTGSVPPPRCGHTATMV---EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~ 241 (519)
-.... ...........+.. ++.+++.|+.+. .+..||+.+.+-...- ....... .+++
T Consensus 216 ~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~------------~i~~wd~~~~~~~~~~---~~~~~~v-~~l~ 276 (357)
T 4g56_B 216 PATRI---DFCASDTIPTSVTWHPEKDDTFACGDETG------------NVSLVNIKNPDSAQTS---AVHSQNI-TGLA 276 (357)
T ss_dssp CBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSS------------CEEEEESSCGGGCEEE---CCCSSCE-EEEE
T ss_pred eeeee---eeccccccccchhhhhcccceEEEeeccc------------ceeEEECCCCcEeEEE---eccceeE-EEEE
Confidence 33221 11111111222222 356777776532 2344565554322111 0111111 1222
Q ss_pred E--eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEE--eCCEEEEEccCCCC
Q 010034 242 S--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC--LGSLYLLFGGFDGK 313 (519)
Q Consensus 242 ~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~--~~~~iyv~GG~~~~ 313 (519)
. .++++++.|+.+ ..|.++|..+.+-...... ...-.+++. .++.+++.||.++.
T Consensus 277 ~sp~~~~~lasgs~D------------~~i~iwd~~~~~~~~~~~H-----~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 277 YSYHSSPFLASISED------------CTVAVLDADFSEVFRDLSH-----RDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp ECSSSSCCEEEEETT------------SCEEEECTTSCEEEEECCC-----SSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EcCCCCCEEEEEeCC------------CEEEEEECCCCcEeEECCC-----CCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 2 233556666543 3478889887654433211 111223333 25778888887764
No 90
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.87 E-value=1 Score=46.43 Aligned_cols=60 Identities=12% Similarity=0.139 Sum_probs=39.7
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEEC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
++.+|+|-| +..|+||..+++.....- +.+ +. .-++....+++|+|-| +..|+||.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w-------~gi--~~-iDAA~~~~g~~YfFkG-------~~y~rfd~ 213 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSW-------PAV--GN-CTSALRWLGRYYCFQG-------NQFLRFNP 213 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECC-------TTS--CC-CSEEEEETTEEEEEET-------TEEEEECT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccC-------CCC--Cc-cchheeeCCceEEEEC-------CEEEEEcC
Confidence 467899988 568999998876543211 112 22 3455556789999987 45788887
Q ss_pred CCCe
Q 010034 110 DIWQ 113 (519)
Q Consensus 110 ~t~~ 113 (519)
.+.+
T Consensus 214 ~~~~ 217 (460)
T 1qhu_A 214 VSGE 217 (460)
T ss_dssp TTCC
T ss_pred ccCc
Confidence 6543
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.87 E-value=1 Score=43.71 Aligned_cols=201 Identities=11% Similarity=0.063 Sum_probs=99.2
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-C--CeEEEEccccCCcCCCcEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D--CHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~--~~iyv~GG~~~~~~~~dv~~y 107 (519)
+.+++.|+.+ ..+.+||+.+++|..+.... .....-.+++.. + +.+++.|+.++ .+.+|
T Consensus 69 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~ 130 (379)
T 3jrp_A 69 GTILASCSYD-----GKVLIWKEENGRWSQIAVHA--------VHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVV 130 (379)
T ss_dssp CSEEEEEETT-----SCEEEEEEETTEEEEEEEEC--------CCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEE
T ss_pred CCEEEEeccC-----CEEEEEEcCCCceeEeeeec--------CCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEE
Confidence 4566666653 45888999999887765431 111122233332 3 56777777553 57888
Q ss_pred ECCCCeE-EEEeeCCCCCCCCCccEEEEEC-------------CcEEEEEecCCCCcCCCcEEEEECCCCc--EEEeccC
Q 010034 108 DTDIWQW-SELTSFGDLPSPRDFAAASAIG-------------NRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVT 171 (519)
Q Consensus 108 d~~t~~W-~~~~~~g~~P~~r~~~~~~~~~-------------~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~~ 171 (519)
|+.+..- ...... . ....-.+++... ++.+++.|+.++. +..||+.+.. |..+.
T Consensus 131 d~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~-- 200 (379)
T 3jrp_A 131 EFKENGTTSPIIID--A-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL-----VKIWKYNSDAQTYVLES-- 200 (379)
T ss_dssp ECCTTSCCCEEEEE--C-CTTCEEEEEECCCC----------CTTCEEEEEETTSC-----EEEEEEETTTTEEEEEE--
T ss_pred ecCCCCceeeEEec--C-CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCe-----EEEEEecCCCcceeeEE--
Confidence 8877632 111110 0 111112222222 4577888876653 7778776543 54443
Q ss_pred CCCCCcccC-eeEEEe-C---CEEEEEcccCCCCCcccccccccccccccCCCCc--eEEecCCCCCCCCcceeEEEE-e
Q 010034 172 GSVPPPRCG-HTATMV-E---KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLKLPGQAPSSRCGHTITS-G 243 (519)
Q Consensus 172 ~~~p~~r~~-~~~~~~-~---~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~--W~~i~~~g~~P~~r~~~s~~~-~ 243 (519)
.+...... .+++.. + +.+++.|+.++ .+..||..+.. +...... .......-.++.. .
T Consensus 201 -~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg------------~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~ 266 (379)
T 3jrp_A 201 -TLEGHSDWVRDVAWSPTVLLRSYLASVSQDR------------TCIIWTQDNEQGPWKKTLLK-EEKFPDVLWRASWSL 266 (379)
T ss_dssp -EECCCSSCEEEEEECCCCSSSEEEEEEETTS------------CEEEEEESSTTSCCEEEESS-SSCCSSCEEEEEECS
T ss_pred -EEecccCcEeEEEECCCCCCCCeEEEEeCCC------------EEEEEeCCCCCccceeeeec-cccCCCcEEEEEEcC
Confidence 11111111 223333 4 67777777543 23345555442 2222111 1111111222333 4
Q ss_pred CCEEEEEeccCCCCCcccccceeCcEEEEEcC-CCeEEEcccC
Q 010034 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL-SAQWKRLPIG 285 (519)
Q Consensus 244 ~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~-t~~W~~v~~~ 285 (519)
++.+++.|+.+ ..+.+||+. ...|..+...
T Consensus 267 ~g~~l~~~~~d------------g~i~iw~~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 267 SGNVLALSGGD------------NKVTLWKENLEGKWEPAGEV 297 (379)
T ss_dssp SSCCEEEEESS------------SSEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEecCC------------CcEEEEeCCCCCccccccce
Confidence 55666666643 346777765 5788877654
No 92
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.82 E-value=1.1 Score=41.57 Aligned_cols=190 Identities=10% Similarity=-0.019 Sum_probs=96.5
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (519)
.++...++.+|+... .+.+++||+.......+.. .....-+.++.. ++++|+..... .
T Consensus 71 ~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~----------~~~~~p~~i~~~~~g~l~v~~~~~-----~ 129 (270)
T 1rwi_B 71 GLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPF----------DGLNYPEGLAVDTQGAVYVADRGN-----N 129 (270)
T ss_dssp CEEECTTCCEEEEET------TTEEEEECTTCSCCEECCC----------CSCSSEEEEEECTTCCEEEEEGGG-----T
T ss_pred eeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeec----------CCcCCCcceEECCCCCEEEEECCC-----C
Confidence 344444456777654 1357888887765443321 111122344444 56888875432 3
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCee
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~ 182 (519)
.++++|..+........ .....-.+++...++++|+.... .+.+.+||+.+..-...... .. ..-..
T Consensus 130 ~i~~~~~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~---~~p~~ 196 (270)
T 1rwi_B 130 RVVKLAAGSKTQTVLPF----TGLNDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPFT-DI---TAPWG 196 (270)
T ss_dssp EEEEECTTCCSCEECCC----CSCCSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCCS-SC---CSEEE
T ss_pred EEEEEECCCceeEeecc----ccCCCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeeccc-CC---CCceE
Confidence 58888776655433221 11112234455556688887542 24589999887765443211 11 11123
Q ss_pred EEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcc
Q 010034 183 ATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLS 260 (519)
Q Consensus 183 ~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~ 260 (519)
++.. ++.+|+..... +.+.+||+.+..-...... ....-.++++ .++.+|+....
T Consensus 197 i~~d~~g~l~v~~~~~------------~~v~~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~~------- 253 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHNT------------NQVVKLLAGSTTSTVLPFT----GLNTPLAVAVDSDRTVYVADRG------- 253 (270)
T ss_dssp EEECTTCCEEEEETTT------------SCEEEECTTCSCCEECCCC----SCSCEEEEEECTTCCEEEEEGG-------
T ss_pred EEECCCCCEEEEECCC------------CcEEEEcCCCCcceeeccC----CCCCceeEEECCCCCEEEEECC-------
Confidence 3333 45888865321 3456677766544333211 1112233444 34678886542
Q ss_pred cccceeCcEEEEEcC
Q 010034 261 RYDIYYNDTIILDRL 275 (519)
Q Consensus 261 ~~~~~~~~v~~yd~~ 275 (519)
.+.|.+|++.
T Consensus 254 -----~~~v~~~~~~ 263 (270)
T 1rwi_B 254 -----NDRVVKLTSL 263 (270)
T ss_dssp -----GTEEEEECCC
T ss_pred -----CCEEEEEcCC
Confidence 2557777754
No 93
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.78 E-value=1.2 Score=42.12 Aligned_cols=207 Identities=8% Similarity=-0.074 Sum_probs=106.0
Q ss_pred cceEEEEECCc-EEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCC
Q 010034 21 SGHSAVNIGKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGS 98 (519)
Q Consensus 21 ~gh~~~~~~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~ 98 (519)
...+.+...++ .+|+.+..+ ..+++||+.++ ...... +.. .-++++.. ++++|+.....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~-----~~i~~~~~~~~-~~~~~~----------~~~-~~~~l~~~~dg~l~v~~~~~-- 89 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQ-----NRTWAWSDDGQ-LSPEMH----------PSH-HQNGHCLNKQGHLIACSHGL-- 89 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTSC-EEEEES----------SCS-SEEEEEECTTCCEEEEETTT--
T ss_pred cccCCeEeCCCCEEEEEeCCC-----CEEEEEECCCC-eEEEEC----------CCC-CcceeeECCCCcEEEEecCC--
Confidence 34455555445 478777543 46899999987 555431 111 12334443 56787764321
Q ss_pred cCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEE----ecCC--------CCcCCCcEEEEECCCCcEE
Q 010034 99 RRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMY----GGWD--------GKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 99 ~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~----GG~~--------~~~~~~~v~~yd~~t~~W~ 166 (519)
..+.+||+.+++...+...........-..+++..+|++|+. |... .......++++|+. .+..
T Consensus 90 ---~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (296)
T 3e5z_A 90 ---RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS 165 (296)
T ss_dssp ---TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE
T ss_pred ---CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE
Confidence 358999998888876642101111111234555567789886 4311 01113479999987 6655
Q ss_pred EeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCC-CCce-EEecCCCCCCCCcceeEEEE-
Q 010034 167 QLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENE-TPGW-TQLKLPGQAPSSRCGHTITS- 242 (519)
Q Consensus 167 ~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~-t~~W-~~i~~~g~~P~~r~~~s~~~- 242 (519)
.+.. ....+ ..++.. ++++++..... +.+.+||+. +++. ...... ....... .+++.
T Consensus 166 ~~~~--~~~~~---~gi~~s~dg~~lv~~~~~------------~~i~~~~~~~~g~~~~~~~~~-~~~~~~p-~~i~~d 226 (296)
T 3e5z_A 166 APIR--DRVKP---NGLAFLPSGNLLVSDTGD------------NATHRYCLNARGETEYQGVHF-TVEPGKT-DGLRVD 226 (296)
T ss_dssp EEEC--CCSSE---EEEEECTTSCEEEEETTT------------TEEEEEEECSSSCEEEEEEEE-CCSSSCC-CSEEEB
T ss_pred Eeec--CCCCC---ccEEECCCCCEEEEeCCC------------CeEEEEEECCCCcCcCCCeEe-eCCCCCC-CeEEEC
Confidence 5541 11111 233333 45555443211 345566665 4444 211110 0011111 12333
Q ss_pred eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcc
Q 010034 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (519)
Q Consensus 243 ~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~ 283 (519)
.++.+|+.. . +.|.+||++......+.
T Consensus 227 ~~G~l~v~~---~-----------~~v~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 227 AGGLIWASA---G-----------DGVHVLTPDGDELGRVL 253 (296)
T ss_dssp TTSCEEEEE---T-----------TEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEc---C-----------CeEEEECCCCCEEEEEE
Confidence 567788866 1 45899999866555554
No 94
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.69 E-value=2.3 Score=43.74 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=59.6
Q ss_pred ceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCc--E-EeeeecCCCCCCCCCCCCcceeEEEE-----eCCeEEEEc
Q 010034 22 GHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL--W-FQPECTGNGSNGQVGPGPRAFHIAVA-----IDCHMFIFG 93 (519)
Q Consensus 22 gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W-~~l~~~~~~~~~~~~p~~R~~h~~~~-----~~~~iyv~G 93 (519)
--+++...++.+|+|=| +.+|+|+-.... . ..+... -+..|. ....+... .++++|+|-
T Consensus 99 IDAa~~~~~g~~yfFkG-------~~yW~~~~~~~~~GYPk~I~~~-----fpGlp~-~IDAA~~~~~~~~~~~~~yfFk 165 (460)
T 1qhu_A 99 VDAAFRHGHTSVYLIKG-------DKVWVYTSEKNEKVYPKSLQDE-----FPGIPF-PLDAAVECHRGECQDEGILFFQ 165 (460)
T ss_dssp CSEEEEETTTEEEEEET-------TEEEEECC-------CEEHHHH-----STTCCS-SCCEEEEECBBTBSSSEEEEEE
T ss_pred cceEEEeCCCcEEEEec-------cEEEEEeCCcccCCCCeEhhhc-----cCCCCC-CeeEEEECCccCCCCCeEEEEe
Confidence 34555555679999987 568888633211 0 111110 011222 22222221 267889998
Q ss_pred cccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 94 GRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 94 G~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
| +..|+||..+++..... -..+|. . .+|...++++|+|-|. ..|+||..+.
T Consensus 166 G-------~~yw~yd~~~~~~~~~~-w~gi~~--i--DAA~~~~g~~YfFkG~-------~y~rfd~~~~ 216 (460)
T 1qhu_A 166 G-------NRKWFWDLTTGTKKERS-WPAVGN--C--TSALRWLGRYYCFQGN-------QFLRFNPVSG 216 (460)
T ss_dssp T-------TEEEEEETTTTEEEEEC-CTTSCC--C--SEEEEETTEEEEEETT-------EEEEECTTTC
T ss_pred c-------ccEEEEecccceeeccc-CCCCCc--c--chheeeCCceEEEECC-------EEEEEcCccC
Confidence 7 45899999988766422 112332 2 3333334699999773 4677876654
No 95
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.68 E-value=1.6 Score=47.20 Aligned_cols=233 Identities=10% Similarity=-0.002 Sum_probs=113.7
Q ss_pred ccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCC
Q 010034 43 RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (519)
Q Consensus 43 ~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~ 122 (519)
.....+|+.+.....|..+....... ...........+.-+++..+|.-..++..-..++++|+.+++... . ..
T Consensus 91 ~~~~~l~~~~~~~~~~~~l~d~~~~a---~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~--~~ 164 (695)
T 2bkl_A 91 KEKAILYWRQGESGQEKVLLDPNGWS---KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-V--DV 164 (695)
T ss_dssp CSSCEEEEEESTTSCCEEEECGGGSS---SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-S--CC
T ss_pred CeEEEEEEEcCCCCCcEEEEchHHhc---cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-C--cc
Confidence 34567899998888888875321100 000101111122225666666544333334579999999987631 1 01
Q ss_pred CCCCCCccEEEEECCcEEEEEecCCCC--------cCCCcEEEEECCCCcE--EEeccCCCCCC-cccCeeEEEe-CCEE
Q 010034 123 LPSPRDFAAASAIGNRKIVMYGGWDGK--------KWLSDVYVLDTISLEW--MQLPVTGSVPP-PRCGHTATMV-EKRL 190 (519)
Q Consensus 123 ~P~~r~~~~~~~~~~~~iyv~GG~~~~--------~~~~~v~~yd~~t~~W--~~l~~~~~~p~-~r~~~~~~~~-~~~l 190 (519)
.+... ....+...+++.++++..+.. .....++++++.+..- ..+. ..+. +........- +++.
T Consensus 165 ~~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~~~~~~SpDG~~ 240 (695)
T 2bkl_A 165 IEGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH---ERTGDPTTFLQSDLSRDGKY 240 (695)
T ss_dssp BSCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE---CCCCCTTCEEEEEECTTSCC
T ss_pred cCccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE---ecCCCCEEEEEEEECCCCCE
Confidence 22221 133444456666666655432 2345699999988763 2332 1111 1122222222 4554
Q ss_pred EEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEE
Q 010034 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (519)
Q Consensus 191 yv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~ 270 (519)
.+++..... .. +.++..|..+..|..+... ..... ..+..++.+|+...... ....++
T Consensus 241 l~~~~~~~~--~~------~~l~~~~~~~~~~~~l~~~---~~~~~--~~~~~~g~l~~~s~~~~---------~~~~l~ 298 (695)
T 2bkl_A 241 LFVYILRGW--SE------NDVYWKRPGEKDFRLLVKG---VGAKY--EVHAWKDRFYVLTDEGA---------PRQRVF 298 (695)
T ss_dssp EEEEEEETT--TE------EEEEEECTTCSSCEEEEEC---SSCCE--EEEEETTEEEEEECTTC---------TTCEEE
T ss_pred EEEEEeCCC--Cc------eEEEEEcCCCCceEEeecC---CCceE--EEEecCCcEEEEECCCC---------CCCEEE
Confidence 444433221 11 3344447667788888621 11111 22224555655543221 235789
Q ss_pred EEEcCCCe---EEEcccCCCCCCCCcceEEEEeCCEEEEEccC
Q 010034 271 ILDRLSAQ---WKRLPIGNEPPPARAYHSMTCLGSLYLLFGGF 310 (519)
Q Consensus 271 ~yd~~t~~---W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~ 310 (519)
++|+.+.. |+.+..... ...-..+...++++++....
T Consensus 299 ~~d~~~~~~~~~~~l~~~~~---~~~l~~~~~~~~~lv~~~~~ 338 (695)
T 2bkl_A 299 EVDPAKPARASWKEIVPEDS---SASLLSVSIVGGHLSLEYLK 338 (695)
T ss_dssp EEBTTBCSGGGCEEEECCCS---SCEEEEEEEETTEEEEEEEE
T ss_pred EEeCCCCCccCCeEEecCCC---CCeEEEEEEECCEEEEEEEE
Confidence 99987654 887754321 11122233336666665543
No 96
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.65 E-value=0.46 Score=46.76 Aligned_cols=208 Identities=12% Similarity=0.011 Sum_probs=95.8
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCe-EEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCH-MFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~-iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~ 123 (519)
..++++|+.+++...+... .....+....- +++ |++............++++|+.+..+..+.. ..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~----------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~ 235 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD----------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--HA 235 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE----------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--CC
T ss_pred ceEEEEECCCCcEEeeccC----------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--cC
Confidence 4789999998887776421 11122333332 344 4443321111122579999998887776652 11
Q ss_pred CCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCc
Q 010034 124 PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPI 202 (519)
Q Consensus 124 P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 202 (519)
+ .......+.-.+++.+++...........++++|+.+.+...+. ..+. .. ....- +++++++.+.... ..
T Consensus 236 ~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~---~~~~--~~-~~~s~~dg~~l~~~~~~~p-~~ 307 (396)
T 3c5m_A 236 E-GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM---VMPP--CS-HLMSNFDGSLMVGDGCDAP-VD 307 (396)
T ss_dssp T-TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE---ECCS--EE-EEEECSSSSEEEEEECCC----
T ss_pred C-CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee---eCCC--CC-CCccCCCCceEEEecCCcc-ee
Confidence 1 11111223334444333333222222234999999999887775 3332 11 22233 5666666442200 00
Q ss_pred ccc-----cccccccccccCCCCceEEecCCCCCC------CC-cceeEEEEeCCEEEEEeccCCCCCcccccceeCcEE
Q 010034 203 MGD-----LWALKGLIEEENETPGWTQLKLPGQAP------SS-RCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (519)
Q Consensus 203 ~~d-----~~~l~~v~~Yd~~t~~W~~i~~~g~~P------~~-r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~ 270 (519)
..+ ...-..++.+|+.+++...+....... .. .........+++.+++...... ...+|
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~---------~~~l~ 378 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG---------VPAIY 378 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---------SCEEE
T ss_pred eccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC---------CceEE
Confidence 000 000134566788887776665211100 00 0111122334433334332221 24689
Q ss_pred EEEcCCCeEEEc
Q 010034 271 ILDRLSAQWKRL 282 (519)
Q Consensus 271 ~yd~~t~~W~~v 282 (519)
.+|+.+..++.+
T Consensus 379 ~~~~~~~~~~~~ 390 (396)
T 3c5m_A 379 IADVPESYKHLE 390 (396)
T ss_dssp EEECCTTCC---
T ss_pred EEEEcccccccc
Confidence 999887776654
No 97
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.52 E-value=3.1 Score=39.20 Aligned_cols=201 Identities=8% Similarity=0.037 Sum_probs=97.5
Q ss_pred EEEEECC-cEEEEEcCcCCCccCCcEEEEEcCCCcEEee-eecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccC---
Q 010034 24 SAVNIGK-SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQP-ECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFG--- 97 (519)
Q Consensus 24 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l-~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~--- 97 (519)
.++...+ +.+|+.+.. +.+++||+. ++...+ ..... ..+..+. +.++.. ++++|+.....+
T Consensus 75 ~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~ 141 (314)
T 1pjx_A 75 GCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSE-----GRRMQGC-NDCAFDYEGNLWITAPAGEVAP 141 (314)
T ss_dssp EEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTT-----SCBCBCC-CEEEECTTSCEEEEECBCBCTT
T ss_pred eEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCC-----CccccCC-cCEEECCCCCEEEEecCccccc
Confidence 3333455 688887641 258999998 776654 32110 1111122 333333 568887653221
Q ss_pred -------CcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEE----CCc-EEEEEecCCCCcCCCcEEEEECC-CCc
Q 010034 98 -------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI----GNR-KIVMYGGWDGKKWLSDVYVLDTI-SLE 164 (519)
Q Consensus 98 -------~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~----~~~-~iyv~GG~~~~~~~~~v~~yd~~-t~~ 164 (519)
......++++|+. ++...+.. .... ....+.. .++ .+|+.... .+.+++||+. +.+
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~---~~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~ 210 (314)
T 1pjx_A 142 ADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQF---PNGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAK 210 (314)
T ss_dssp SCCCBTTSSSCEEEEEECTT-SCEEEEEE--EESS---EEEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTE
T ss_pred ccccccccCCCCeEEEECCC-CCEEEecc--CCCC---cceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCc
Confidence 1112468999987 66655432 1111 1334444 555 56776532 2458889876 444
Q ss_pred EEEeccCCCCCCc--ccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCce-EEecCCCCCCCCcceeEE
Q 010034 165 WMQLPVTGSVPPP--RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW-TQLKLPGQAPSSRCGHTI 240 (519)
Q Consensus 165 W~~l~~~~~~p~~--r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W-~~i~~~g~~P~~r~~~s~ 240 (519)
......-...+.. ..-..++.. ++++|+..... +.+.+||+.+.+. ..+. .|.. .-.++
T Consensus 211 ~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~------------~~i~~~d~~~g~~~~~~~----~~~~-~~~~i 273 (314)
T 1pjx_A 211 IENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS------------SHIEVFGPDGGQPKMRIR----CPFE-KPSNL 273 (314)
T ss_dssp EEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT------------TEEEEECTTCBSCSEEEE----CSSS-CEEEE
T ss_pred cccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC------------CEEEEEcCCCCcEeEEEe----CCCC-CceeE
Confidence 3322110011111 111223333 56888764211 3456678874433 2332 2221 22233
Q ss_pred EE-eCC-EEEEEeccCCCCCcccccceeCcEEEEEcCCC
Q 010034 241 TS-GGH-YLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (519)
Q Consensus 241 ~~-~~~-~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~ 277 (519)
+. .++ .||+..... +.+++|++...
T Consensus 274 ~~~~dg~~l~v~~~~~------------~~l~~~~~~~~ 300 (314)
T 1pjx_A 274 HFKPQTKTIFVTEHEN------------NAVWKFEWQRN 300 (314)
T ss_dssp EECTTSSEEEEEETTT------------TEEEEEECSSC
T ss_pred EECCCCCEEEEEeCCC------------CeEEEEeCCCC
Confidence 33 334 477755321 46899998754
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.48 E-value=4.5 Score=40.65 Aligned_cols=177 Identities=13% Similarity=0.008 Sum_probs=92.7
Q ss_pred eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
.++..++.|+.++ .+.+||+.+.+-...-. .+. ..-.+++...++..++.|+.++. +..||+.+.+
T Consensus 278 ~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~---~~~-~~v~~~~~~~~~~~l~sg~~dg~-----i~vwd~~~~~ 343 (464)
T 3v7d_B 278 GHGNIVVSGSYDN-----TLIVWDVAQMKCLYILS---GHT-DRIYSTIYDHERKRCISASMDTT-----IRIWDLENGE 343 (464)
T ss_dssp EETTEEEEEETTS-----CEEEEETTTTEEEEEEC---CCS-SCEEEEEEETTTTEEEEEETTSC-----EEEEETTTTE
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEEec---CCC-CCEEEEEEcCCCCEEEEEeCCCc-----EEEEECCCCc
Confidence 3456666776553 58999998876543321 111 12234444455567777776543 8899998876
Q ss_pred EEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeC
Q 010034 165 WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGG 244 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~ 244 (519)
-...- .........+..++..++.|+.+ ..+..||+.+..-.... ... ......+...+
T Consensus 344 ~~~~~-----~~h~~~v~~~~~~~~~l~s~s~d------------g~v~vwd~~~~~~~~~~---~~~-~~~~~~~~~~~ 402 (464)
T 3v7d_B 344 LMYTL-----QGHTALVGLLRLSDKFLVSAAAD------------GSIRGWDANDYSRKFSY---HHT-NLSAITTFYVS 402 (464)
T ss_dssp EEEEE-----CCCSSCEEEEEECSSEEEEEETT------------SEEEEEETTTCCEEEEE---ECT-TCCCEEEEEEC
T ss_pred EEEEE-----eCCCCcEEEEEEcCCEEEEEeCC------------CcEEEEECCCCceeeee---cCC-CCccEEEEEeC
Confidence 44322 11112223344456666666643 23455676665432222 111 11222333456
Q ss_pred CEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCC
Q 010034 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (519)
Q Consensus 245 ~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~ 312 (519)
+.+++.|+ + +.+.+||+.+.+-....... ....-.++...++.+++.++.++
T Consensus 403 ~~~l~~~~-d------------g~i~iwd~~~g~~~~~~~~~---~~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 403 DNILVSGS-E------------NQFNIYNLRSGKLVHANILK---DADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp SSEEEEEE-T------------TEEEEEETTTCCEEESCTTT---TCSEEEEEEEETTEEEEEEEETT
T ss_pred CCEEEEec-C------------CeEEEEECCCCcEEehhhcc---CCCcEEEEEecCCEEEEEEEeCC
Confidence 66666665 2 35899999887655422211 12222333444666666666544
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.46 E-value=2 Score=42.61 Aligned_cols=138 Identities=14% Similarity=0.069 Sum_probs=70.5
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEE-----eeeecCCCCCCCCCCCCcceeEEEEe-CC-eEEEEccccCCcCCC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWF-----QPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLG 102 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-----~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~ 102 (519)
++.+++.|+.+ ..+.+||+.++... .+... .... ..-.+++.. ++ .+++.|+.++
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~-------~~h~-~~v~~~~~~p~~~~~l~s~~~dg----- 154 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITL-------EGHT-KRVGIVAWHPTAQNVLLSAGCDN----- 154 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEE-------ECCS-SCEEEEEECSSBTTEEEEEETTS-----
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEe-------cCCC-CeEEEEEECcCCCCEEEEEcCCC-----
Confidence 45677777644 35788888876431 11100 0011 112223333 33 5777777654
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCee
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~ 182 (519)
.+.++|+.+++....-. .......-.+++...++..++.|+.++ .+..||+.+.+-...-.. .....+. ..
T Consensus 155 ~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~-~~~~~~~-~~ 225 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLG--PDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKGTVVAEKDR-PHEGTRP-VH 225 (402)
T ss_dssp CEEEEETTTTEEEEEEC--TTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEEC-SSCSSSC-CE
T ss_pred EEEEEECCCCCccEEEe--cCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCCceeeeecc-CCCCCcc-eE
Confidence 48999999887654321 001111223333444667777777654 489999988764433201 1111112 22
Q ss_pred EEEe-CCEEEEEc
Q 010034 183 ATMV-EKRLLIYG 194 (519)
Q Consensus 183 ~~~~-~~~lyv~G 194 (519)
++.. ++++++.|
T Consensus 226 ~~~~~~~~~l~~g 238 (402)
T 2aq5_A 226 AVFVSEGKILTTG 238 (402)
T ss_dssp EEECSTTEEEEEE
T ss_pred EEEcCCCcEEEEe
Confidence 3333 66777766
No 100
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.41 E-value=3.1 Score=39.57 Aligned_cols=193 Identities=10% Similarity=0.016 Sum_probs=93.4
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCCCcE-EeeeecCCCCCCCCCCCCcceeEEEEe-C-CeEEEEccccCCcCCCcEEEEE
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDNKLW-FQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~~~W-~~l~~~~~~~~~~~~p~~R~~h~~~~~-~-~~iyv~GG~~~~~~~~dv~~yd 108 (519)
.+|+.+..+ +.++++|+.+++- ...... ...+ .++++.. + ..+| .+...+ ....+.++|
T Consensus 53 ~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~--------~~~~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d 114 (331)
T 3u4y_A 53 NVVVTSDFC-----QTLVQIETQLEPPKVVAIQE--------GQSS--MADVDITPDDQFAV-TVTGLN--HPFNMQSYS 114 (331)
T ss_dssp EEEEEESTT-----CEEEEEECSSSSCEEEEEEE--------CSSC--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEE
T ss_pred EEEEEeCCC-----CeEEEEECCCCceeEEeccc--------CCCC--ccceEECCCCCEEE-EecCCC--CcccEEEEE
Confidence 477666532 3789999988874 222111 1111 2312332 3 3566 332221 112699999
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCc-EEEEECCCCc-EEEeccCCCCCCcccCeeEEE
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSD-VYVLDTISLE-WMQLPVTGSVPPPRCGHTATM 185 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~-v~~yd~~t~~-W~~l~~~~~~p~~r~~~~~~~ 185 (519)
+.+++....... ....+.++.-.++ .+|+.+..+ +. +..|++.... ..... ....+....-..++.
T Consensus 115 ~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 183 (331)
T 3u4y_A 115 FLKNKFISTIPI-----PYDAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITF 183 (331)
T ss_dssp TTTTEEEEEEEC-----CTTEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEE
T ss_pred CCCCCeEEEEEC-----CCCccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecC-CccccCCCCccceEE
Confidence 999876554322 1122455555555 477765432 23 6666655322 11110 000111111133333
Q ss_pred e-CC-EEEEEcccCCCCCcccccccccccccccCCCCce---E-EecCCCCCCCCcceeEEEE-eCC-EEEEEeccCCCC
Q 010034 186 V-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW---T-QLKLPGQAPSSRCGHTITS-GGH-YLLLFGGHGTGG 257 (519)
Q Consensus 186 ~-~~-~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W---~-~i~~~g~~P~~r~~~s~~~-~~~-~iyv~GG~~~~~ 257 (519)
. ++ .+|+.+... +.+..||+.+.+. . .+.. +..| ..++. -++ .+|+....
T Consensus 184 spdg~~l~v~~~~~------------~~v~v~d~~~~~~~~~~~~~~~-~~~~-----~~~~~spdg~~l~v~~~~---- 241 (331)
T 3u4y_A 184 TPDGNFAFVANLIG------------NSIGILETQNPENITLLNAVGT-NNLP-----GTIVVSRDGSTVYVLTES---- 241 (331)
T ss_dssp CTTSSEEEEEETTT------------TEEEEEECSSTTSCEEEEEEEC-SSCC-----CCEEECTTSSEEEEECSS----
T ss_pred CCCCCEEEEEeCCC------------CeEEEEECCCCcccceeeeccC-CCCC-----ceEEECCCCCEEEEEEcC----
Confidence 3 44 577765321 3456678877664 2 2221 1111 12333 334 46665431
Q ss_pred CcccccceeCcEEEEEcCCCeEEEcc
Q 010034 258 WLSRYDIYYNDTIILDRLSAQWKRLP 283 (519)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~t~~W~~v~ 283 (519)
.+.++++|+.+.+...+.
T Consensus 242 --------~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 242 --------TVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp --------EEEEEEEETTTTEEEEEE
T ss_pred --------CCEEEEEECCCCceeeec
Confidence 245899999988875544
No 101
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.28 E-value=1.4 Score=47.65 Aligned_cols=214 Identities=13% Similarity=0.066 Sum_probs=109.5
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCC--------cC
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS--------RR 100 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~--------~~ 100 (519)
.|++.++|.-..++..-..++++|+.+++..... ..+..+....+..-+++.++++..... ..
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~---------~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD---------VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC---------CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc---------ccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 4455555544333344568999999998764111 011111122222235666666655332 23
Q ss_pred CCcEEEEECCCCeE--EEEeeCCCCCC-CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCc
Q 010034 101 LGDFWVLDTDIWQW--SELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (519)
Q Consensus 101 ~~dv~~yd~~t~~W--~~~~~~g~~P~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~ 177 (519)
...++++++.+..- ..+.. .+. +....+...-.+++..+++..... ..+.++.+|..+..|..+... ..
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~---~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~---~~- 272 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHE---RTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKG---VG- 272 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEEC---CCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEEC---SS-
T ss_pred CCEEEEEECCCCchhceEEEe---cCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecC---CC-
Confidence 45699999988753 23331 222 222333444455554444443221 345788888888888888621 11
Q ss_pred ccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCc---eEEecCCCCCCCCcceeEEEEeCCEEEEEeccC
Q 010034 178 RCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG---WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHG 254 (519)
Q Consensus 178 r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~---W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~ 254 (519)
.....+..++.+|+........ ..+..+|+++.. |+.+... .+ ...-..+...++.+++....+
T Consensus 273 -~~~~~~~~~g~l~~~s~~~~~~---------~~l~~~d~~~~~~~~~~~l~~~--~~-~~~l~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 273 -AKYEVHAWKDRFYVLTDEGAPR---------QRVFEVDPAKPARASWKEIVPE--DS-SASLLSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp -CCEEEEEETTEEEEEECTTCTT---------CEEEEEBTTBCSGGGCEEEECC--CS-SCEEEEEEEETTEEEEEEEET
T ss_pred -ceEEEEecCCcEEEEECCCCCC---------CEEEEEeCCCCCccCCeEEecC--CC-CCeEEEEEEECCEEEEEEEEC
Confidence 1122233455666654332111 334556766554 8887621 11 111223334578887776543
Q ss_pred CCCCcccccceeCcEEEEEcCCCeEEEc
Q 010034 255 TGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (519)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~t~~W~~v 282 (519)
. ...+|++++....-..+
T Consensus 340 g----------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 340 A----------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp T----------EEEEEEEETTCCEEEEC
T ss_pred C----------EEEEEEEeCCCCeeEEe
Confidence 2 35688899765544444
No 102
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.28 E-value=3.5 Score=41.23 Aligned_cols=68 Identities=7% Similarity=-0.088 Sum_probs=39.5
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++..++.|+.++ .+.++|+.++.-...-. .+.. .-.++....++.+++.|+.++. +..||+.+.+.
T Consensus 203 ~~~~l~s~s~D~-----~i~~wd~~~~~~~~~~~---~h~~-~v~~~~~~~~g~~l~s~s~D~~-----v~vwd~~~~~~ 268 (410)
T 1vyh_C 203 NGDHIVSASRDK-----TIKMWEVQTGYCVKTFT---GHRE-WVRMVRPNQDGTLIASCSNDQT-----VRVWVVATKEC 268 (410)
T ss_dssp SSSEEEEEETTS-----EEEEEETTTCCEEEEEE---CCSS-CEEEEEECTTSSEEEEEETTSC-----EEEEETTTCCE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEe---CCCc-cEEEEEECCCCCEEEEEcCCCe-----EEEEECCCCce
Confidence 456677777553 58899998876433221 1111 1122223355677888876643 77888877765
Q ss_pred EE
Q 010034 166 MQ 167 (519)
Q Consensus 166 ~~ 167 (519)
..
T Consensus 269 ~~ 270 (410)
T 1vyh_C 269 KA 270 (410)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 103
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.26 E-value=7.2 Score=42.42 Aligned_cols=107 Identities=7% Similarity=-0.101 Sum_probs=57.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++..++.|+.+ ..+.+||..+++....-. ..... -.+++.. ++..++.|+.++ .+.+|
T Consensus 65 ~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~---------~~~~~-v~~~~~s~~~~~l~~~~~dg-----~i~vw 124 (814)
T 3mkq_A 65 ARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFE---------AHPDY-IRSIAVHPTKPYVLSGSDDL-----TVKLW 124 (814)
T ss_dssp GGGTEEEEEETT-----SEEEEEETTTCCEEEEEE---------CCSSC-EEEEEECSSSSEEEEEETTS-----EEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEEe---------cCCCC-EEEEEEeCCCCEEEEEcCCC-----EEEEE
Confidence 334555666542 468889988877544321 11111 2222222 455566666443 58889
Q ss_pred ECCCC-eEEEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 108 DTDIW-QWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 108 d~~t~-~W~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
|..++ ....... ... ..-.+++... ++..++.|+.++ .+..||+.+.+
T Consensus 125 ~~~~~~~~~~~~~---~~~-~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~ 174 (814)
T 3mkq_A 125 NWENNWALEQTFE---GHE-HFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQST 174 (814)
T ss_dssp EGGGTSEEEEEEE---CCS-SCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSS
T ss_pred ECCCCceEEEEEc---CCC-CcEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 98876 3333221 111 1122333334 567888887654 48888887654
No 104
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.24 E-value=3.2 Score=39.43 Aligned_cols=104 Identities=9% Similarity=-0.038 Sum_probs=51.4
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcC-CCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCe-EEEEccccCCcCCCcEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDID-NKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCH-MFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~-iyv~GG~~~~~~~~dv~~y 107 (519)
..+|+.++.+ +.+.+||+. ++....+.... ....-+.++. -+++ +|+.+. .. ..+.+|
T Consensus 5 ~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~spdg~~l~~~~~-~~----~~v~~~ 65 (343)
T 1ri6_A 5 QTVYIASPES-----QQIHVWNLNHEGALTLTQVVD---------VPGQVQPMVVSPDKRYLYVGVR-PE----FRVLAY 65 (343)
T ss_dssp EEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEE---------CSSCCCCEEECTTSSEEEEEET-TT----TEEEEE
T ss_pred EEEEEeCCCC-----CeEEEEEECCCCcEEEeeeEe---------cCCCCceEEECCCCCEEEEeec-CC----CeEEEE
Confidence 4567665432 457888874 45555543221 1111122333 2444 555443 21 357777
Q ss_pred ECC--CCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECC
Q 010034 108 DTD--IWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTI 161 (519)
Q Consensus 108 d~~--t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~ 161 (519)
++. ++++..+.. .+....-..++.-.++ .+|+.+..+ ..+..||+.
T Consensus 66 ~~~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~ 114 (343)
T 1ri6_A 66 RIAPDDGALTFAAE---SALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLE 114 (343)
T ss_dssp EECTTTCCEEEEEE---EECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEE
T ss_pred EecCCCCceeeccc---cccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECC
Confidence 776 778876653 2222222344444444 466554322 347788873
No 105
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.21 E-value=3.6 Score=38.67 Aligned_cols=197 Identities=9% Similarity=-0.067 Sum_probs=100.0
Q ss_pred EEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEE----ccccC---
Q 010034 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIF----GGRFG--- 97 (519)
Q Consensus 25 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~----GG~~~--- 97 (519)
++...++.+|+.... ...+.+||+.+++...+..... ..+..+....++.-++++|+. |....
T Consensus 74 l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~-----~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 74 HCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFE-----GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp EEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEET-----TEECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred eeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccC-----CCCCCCCCCEEECCCCCEEEECCcccccccccc
Confidence 333455677765431 1458999998888776542110 111112223333346788886 44210
Q ss_pred -----CcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECC-CCcE-EEecc
Q 010034 98 -----SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEW-MQLPV 170 (519)
Q Consensus 98 -----~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~-t~~W-~~l~~ 170 (519)
......++++|+. ++...+.. .... -.+.+...++++++.+.. .+.+++||+. +.+. .....
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~---~~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPD-GTLSAPIR--DRVK---PNGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp SCCCCCSSSCEEEEECTT-SCEEEEEC--CCSS---EEEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEE
T ss_pred ccccccCCCcEEEEECCC-CCEEEeec--CCCC---CccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeE
Confidence 1112469999988 66555542 1111 133444455666644432 2458999986 5555 22111
Q ss_pred CCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eC-CE
Q 010034 171 TGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GG-HY 246 (519)
Q Consensus 171 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~-~~ 246 (519)
- ....... ..++.. ++++|+..+ +.+.+||++......+..+ .. . .+++. -+ +.
T Consensus 213 ~-~~~~~~p-~~i~~d~~G~l~v~~~--------------~~v~~~~~~g~~~~~~~~~----~~-~-~~~~f~~~d~~~ 270 (296)
T 3e5z_A 213 F-TVEPGKT-DGLRVDAGGLIWASAG--------------DGVHVLTPDGDELGRVLTP----QT-T-SNLCFGGPEGRT 270 (296)
T ss_dssp E-CCSSSCC-CSEEEBTTSCEEEEET--------------TEEEEECTTSCEEEEEECS----SC-C-CEEEEESTTSCE
T ss_pred e-eCCCCCC-CeEEECCCCCEEEEcC--------------CeEEEECCCCCEEEEEECC----CC-c-eeEEEECCCCCE
Confidence 0 1111111 123333 678888761 3456778886655555532 22 1 12222 12 35
Q ss_pred EEEEeccCCCCCcccccceeCcEEEEEcCCCe
Q 010034 247 LLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (519)
Q Consensus 247 iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~ 278 (519)
||+... +.+|+|++++.+
T Consensus 271 L~v~t~--------------~~l~~~~~~~~~ 288 (296)
T 3e5z_A 271 LYMTVS--------------TEFWSIETNVRG 288 (296)
T ss_dssp EEEEET--------------TEEEEEECSCCB
T ss_pred EEEEcC--------------CeEEEEEccccc
Confidence 777442 458999988765
No 106
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.14 E-value=2.6 Score=40.60 Aligned_cols=121 Identities=12% Similarity=0.070 Sum_probs=61.8
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCC-eEEEEccccCCcCCCcEEE
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~~~~~dv~~ 106 (519)
..+++||+.+... ....+++||+.++.++.+.... .......+.++.-++ .+|+.+..+ ..+.+
T Consensus 48 spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~-------~~~~~p~~~a~spdg~~l~~~~~~~-----~~v~v 112 (347)
T 3hfq_A 48 SAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVV-------APGTPPAYVAVDEARQLVYSANYHK-----GTAEV 112 (347)
T ss_dssp CTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEE-------EESCCCSEEEEETTTTEEEEEETTT-----TEEEE
T ss_pred ccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeee-------cCCCCCEEEEECCCCCEEEEEeCCC-----CEEEE
Confidence 3456666665321 1256899999888877765321 011122233333344 466654222 35778
Q ss_pred EECC-CCeEEEEee---CCCCCCCC----CccEEEEECCcEEEEEecCCCCcCCCcEEEEECC-CCcEEEe
Q 010034 107 LDTD-IWQWSELTS---FGDLPSPR----DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEWMQL 168 (519)
Q Consensus 107 yd~~-t~~W~~~~~---~g~~P~~r----~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~l 168 (519)
||+. +++...+.. .+..|.+| .-++++.-.++++|+.+..+ +.+..||+. +.+...+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTSCEEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCCcEEEe
Confidence 8874 334443332 22222222 12334444566777765322 358889887 5665544
No 107
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.13 E-value=7.5 Score=42.02 Aligned_cols=125 Identities=14% Similarity=0.088 Sum_probs=67.1
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
+++||+... .+.++.+|..++ .|+.-...... ..+.........+.++.+++||+... -..++.+
T Consensus 77 ~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l~al 143 (677)
T 1kb0_A 77 DGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRS-TGFKGCCDVVNRGVALWKGKVYVGAW------DGRLIAL 143 (677)
T ss_dssp TTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGG-GGGGSSSCSCCCCCEEETTEEEEECT------TSEEEEE
T ss_pred CCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCcc-ccccccccCCCCCceEECCEEEEEcC------CCEEEEE
Confidence 478988765 256899999876 48764321000 00000000112234557888887632 1359999
Q ss_pred ECCCCe--EEEEeeCCCCCC-CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEec
Q 010034 108 DTDIWQ--WSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLP 169 (519)
Q Consensus 108 d~~t~~--W~~~~~~g~~P~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~ 169 (519)
|..|++ |+.-... +.+. .....+.++. ++.+|+..+......-..++.||..|.+ |+.-.
T Consensus 144 D~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 144 DAATGKEVWHQNTFE-GQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp ETTTCCEEEEEETTT-TCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred ECCCCCEEeeecCCc-CcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 998774 8764310 1111 1112223334 4578775432222234569999999876 87654
No 108
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.10 E-value=4.9 Score=39.57 Aligned_cols=110 Identities=9% Similarity=0.005 Sum_probs=60.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.|+.+ ..+.+||+.+..-...- . .....-.+++.. ++++++.|+.++ .+.+|
T Consensus 107 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~-~---------~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iw 166 (420)
T 3vl1_A 107 LQMRRFILGTTE-----GDIKVLDSNFNLQREID-Q---------AHVSEITKLKFFPSGEALISSSQDM-----QLKIW 166 (420)
T ss_dssp SSSCEEEEEETT-----SCEEEECTTSCEEEEET-T---------SSSSCEEEEEECTTSSEEEEEETTS-----EEEEE
T ss_pred cCCCEEEEEECC-----CCEEEEeCCCcceeeec-c---------cccCccEEEEECCCCCEEEEEeCCC-----eEEEE
Confidence 445677777653 35788898876543321 0 111122333333 566777777553 58899
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEE
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 167 (519)
|+.+.+-...-. .. ...-.+++...++..++.|+.++. +..||+.+.+-..
T Consensus 167 d~~~~~~~~~~~---~h-~~~v~~~~~~~~~~~l~s~~~d~~-----v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 167 SVKDGSNPRTLI---GH-RATVTDIAIIDRGRNVLSASLDGT-----IRLWECGTGTTIH 217 (420)
T ss_dssp ETTTCCCCEEEE---CC-SSCEEEEEEETTTTEEEEEETTSC-----EEEEETTTTEEEE
T ss_pred eCCCCcCceEEc---CC-CCcEEEEEEcCCCCEEEEEcCCCc-----EEEeECCCCceeE
Confidence 988764222110 11 111233444455667777776543 8889988776443
No 109
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.09 E-value=2.1 Score=46.42 Aligned_cols=214 Identities=10% Similarity=-0.001 Sum_probs=102.0
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCC---cEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcE
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNK---LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDF 104 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~---~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv 104 (519)
..|++.++++.. ..++++|+.++ .-..+.. ...........-+++.++++.. +.+
T Consensus 117 SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~----------~~~~~~~~~~SPDG~~la~~~~------~~i 174 (741)
T 2ecf_A 117 SPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTH----------GEGFATDAKLSPKGGFVSFIRG------RNL 174 (741)
T ss_dssp CTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCC----------SSSCEEEEEECTTSSEEEEEET------TEE
T ss_pred CCCCCEEEEEeC------CcEEEEECCCCCcceEEEccc----------CCcccccccCCCCCCEEEEEeC------CcE
Confidence 344555555542 68999999887 5444321 1111222222235655555431 369
Q ss_pred EEEECCCCeEEEEeeCCCCCC--CC----------CccEEEEECCcEEEEEecCCCC-----------------------
Q 010034 105 WVLDTDIWQWSELTSFGDLPS--PR----------DFAAASAIGNRKIVMYGGWDGK----------------------- 149 (519)
Q Consensus 105 ~~yd~~t~~W~~~~~~g~~P~--~r----------~~~~~~~~~~~~iyv~GG~~~~----------------------- 149 (519)
+++|+.+++...+...+..+. +. ...+.+.-.+++.++++..++.
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 999999988777653211100 00 0122333345554444433221
Q ss_pred -----cCCCcEEEEECCC-CcEEEeccCCCCCCcccCeeEEEeCC-EEEEEcccCCCCCcccccccccccccccCCCCce
Q 010034 150 -----KWLSDVYVLDTIS-LEWMQLPVTGSVPPPRCGHTATMVEK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW 222 (519)
Q Consensus 150 -----~~~~~v~~yd~~t-~~W~~l~~~~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W 222 (519)
.....++.+|+.+ .+-..+... . +....-..++.-++ .|++........ -..+..+|+.+.+.
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~~pDg~~l~~~~~~~~~~--------~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQWIDLG-K-EQDIYLARVNWRDPQHLSFQRQSRDQK--------KLDLVEVTLASNQQ 324 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCEEECCC-S-CSSEEEEEEEEEETTEEEEEEEETTSS--------EEEEEEEETTTCCE
T ss_pred CCCCCCCeeEEEEEECCCCCceEEecCC-C-CcceEEEEEEeCCCCEEEEEEecccCC--------eEEEEEEECCCCce
Confidence 1122688899988 776655411 0 11111111111333 455444322211 14566678888887
Q ss_pred EEecCCCCCCC-CcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEccc
Q 010034 223 TQLKLPGQAPS-SRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 223 ~~i~~~g~~P~-~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~ 284 (519)
..+........ ......+..-++++++.++.++ ...+|.+|.... ...+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g----------~~~l~~~~~~~~-~~~l~~ 376 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTG----------FQHLYRIDSKGK-AAALTH 376 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTS----------SCEEEEECSSSC-EEESCC
T ss_pred EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCC----------ccEEEEEcCCCC-eeeeee
Confidence 76542101000 0111122334566655554321 257899987766 665543
No 110
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.03 E-value=4.1 Score=38.45 Aligned_cols=213 Identities=10% Similarity=-0.006 Sum_probs=106.2
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCc--EEeeeecCCCCCCCCCCC-CcceeEEEEeCCeEEEEccccCCcCCCcEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPG-PRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~l~~~~~~~~~~~~p~-~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
+.+++.|..+ +.+..+|+++++ |+... +. ....+..+.-++++++.+. +.+..|
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~-----------~~~~~~~~~~~~pdG~ilvs~~-------~~V~~~ 61 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPL-----------EKGWECNSVAATKAGEILFSYS-------KGAKMI 61 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEEC-----------CTTCCCCEEEECTTSCEEEECB-------SEEEEE
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCC-----------CccCCCcCeEECCCCCEEEeCC-------CCEEEE
Confidence 4666766533 567889987764 76532 11 1222333344778888321 358999
Q ss_pred ECCCC-eEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc-EEEeccCCCCCCc--ccCeeE
Q 010034 108 DTDIW-QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE-WMQLPVTGSVPPP--RCGHTA 183 (519)
Q Consensus 108 d~~t~-~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~-W~~l~~~~~~p~~--r~~~~~ 183 (519)
|+... .|+.-. +.....+++....++.+++....+ ...++.+|+.-.. |+.-. .+..+.+ ......
T Consensus 62 d~~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~-~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 62 TRDGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEF-ETGIERPHAQFRQIN 131 (276)
T ss_dssp CTTSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEE-CCSCSSGGGSCSCCE
T ss_pred CCCCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEec-cCCCCcccccccCce
Confidence 99322 465432 222233455566677777765431 2347788874432 44321 1121111 111222
Q ss_pred EEeCCEEEEEcccCCCCCcccccccccccccccCCCC-ceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccc
Q 010034 184 TMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP-GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRY 262 (519)
Q Consensus 184 ~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~-~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~ 262 (519)
...++.+++..... ..+.+||++.. .|+.-. . ..|. .+....++.+++.+...
T Consensus 132 ~~~~G~~lv~~~~~------------~~v~~~d~~G~~~w~~~~-~-~~~~----~~~~~~~g~~~v~~~~~-------- 185 (276)
T 3no2_A 132 KNKKGNYLVPLFAT------------SEVREIAPNGQLLNSVKL-S-GTPF----SSAFLDNGDCLVACGDA-------- 185 (276)
T ss_dssp ECTTSCEEEEETTT------------TEEEEECTTSCEEEEEEC-S-SCCC----EEEECTTSCEEEECBTT--------
T ss_pred ECCCCCEEEEecCC------------CEEEEECCCCCEEEEEEC-C-CCcc----ceeEcCCCCEEEEeCCC--------
Confidence 33355655543211 34667787733 355433 1 1121 13334567777776432
Q ss_pred cceeCcEEEEEcCCC--eEEEcccCCCCCCCCc--ceEEEEe-CCEEEEEc
Q 010034 263 DIYYNDTIILDRLSA--QWKRLPIGNEPPPARA--YHSMTCL-GSLYLLFG 308 (519)
Q Consensus 263 ~~~~~~v~~yd~~t~--~W~~v~~~~~~p~~R~--~~~~v~~-~~~iyv~G 308 (519)
..+..+|+++. .|+.-... .+..|. -.+++.. ++.+||..
T Consensus 186 ----~~v~~~d~~tG~~~w~~~~~~--~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 186 ----HCFVQLNLESNRIVRRVNAND--IEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ----SEEEEECTTTCCEEEEEEGGG--SBSCCCSEEEEEEECTTSCEEEEE
T ss_pred ----CeEEEEeCcCCcEEEEecCCC--CCCccccccccceEcCCCCEEEEe
Confidence 35899999843 46553221 111232 2233333 68888876
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.02 E-value=5.6 Score=39.93 Aligned_cols=221 Identities=14% Similarity=0.052 Sum_probs=105.6
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCC
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t 111 (519)
.+++.|+.+ ..+.+||..+.+-...- . ... ..-.+++...+.+++.|+.++ .+.++|+.+
T Consensus 133 ~~l~sgs~d-----g~i~vwd~~~~~~~~~~-~--------~h~-~~V~~l~~~~~~~l~s~s~dg-----~i~vwd~~~ 192 (464)
T 3v7d_B 133 NYVITGADD-----KMIRVYDSINKKFLLQL-S--------GHD-GGVWALKYAHGGILVSGSTDR-----TVRVWDIKK 192 (464)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEE-C--------CCS-SCEEEEEECSTTEEEEEETTS-----CEEEEETTT
T ss_pred CEEEEEcCC-----CcEEEEECCCCcEEEEE-e--------CCC-cCEEEEEEcCCCEEEEEeCCC-----CEEEEECCC
Confidence 456666543 45888998876532211 1 111 112333334444667777554 488999998
Q ss_pred CeEEEEeeCCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCC-----------------
Q 010034 112 WQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG----------------- 172 (519)
Q Consensus 112 ~~W~~~~~~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~----------------- 172 (519)
++-...-. .+... -.++... .++..++.|+.++. +..||+.+..-.......
T Consensus 193 ~~~~~~~~---~h~~~-v~~l~~~~~~~~~~l~s~s~d~~-----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 193 GCCTHVFE---GHNST-VRCLDIVEYKNIKYIVTGSRDNT-----LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp TEEEEEEC---CCSSC-EEEEEEEESSSCEEEEEEETTSC-----EEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred CcEEEEEC---CCCCc-cEEEEEecCCCCCEEEEEcCCCc-----EEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 86443321 11111 1222222 45577888876653 777887765422110000
Q ss_pred -CCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEe
Q 010034 173 -SVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFG 251 (519)
Q Consensus 173 -~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~G 251 (519)
...........+..++..++.|+.+ ..+..||..+.+-...- ..........+...++..++.|
T Consensus 264 ~~~~~~~~~v~~~~~~~~~l~~~~~d------------~~i~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~sg 328 (464)
T 3v7d_B 264 GVLRGHMASVRTVSGHGNIVVSGSYD------------NTLIVWDVAQMKCLYIL---SGHTDRIYSTIYDHERKRCISA 328 (464)
T ss_dssp EEECCCSSCEEEEEEETTEEEEEETT------------SCEEEEETTTTEEEEEE---CCCSSCEEEEEEETTTTEEEEE
T ss_pred EEccCccceEEEEcCCCCEEEEEeCC------------CeEEEEECCCCcEEEEe---cCCCCCEEEEEEcCCCCEEEEE
Confidence 0000011111222345555666543 23455677665543322 1111122212222345566666
Q ss_pred ccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCC
Q 010034 252 GHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (519)
Q Consensus 252 G~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~ 313 (519)
+.+ ..+.+||+.+.+-...-.. ....-..+..++..++.|+.++.
T Consensus 329 ~~d------------g~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~s~dg~ 373 (464)
T 3v7d_B 329 SMD------------TTIRIWDLENGELMYTLQG-----HTALVGLLRLSDKFLVSAAADGS 373 (464)
T ss_dssp ETT------------SCEEEEETTTTEEEEEECC-----CSSCEEEEEECSSEEEEEETTSE
T ss_pred eCC------------CcEEEEECCCCcEEEEEeC-----CCCcEEEEEEcCCEEEEEeCCCc
Confidence 543 3588999877653322111 12223344556777788877653
No 112
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=93.84 E-value=4 Score=44.19 Aligned_cols=211 Identities=9% Similarity=0.071 Sum_probs=107.4
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCC--------cC
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS--------RR 100 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~--------~~ 100 (519)
.|++.++|+-..++..-..++++|+.+++...... +..+....+.. +++-++++..... ..
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~----------~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL----------KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE----------EEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc----------CCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 44555555433333344689999999998765431 11112222334 5543334333321 33
Q ss_pred CCcEEEEECCCCeE--EEEeeCCCCCC--CCCccEEEEECCcE-EEEEecCCCCcCCCcEEEEECCCC--cEEEeccCCC
Q 010034 101 LGDFWVLDTDIWQW--SELTSFGDLPS--PRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISL--EWMQLPVTGS 173 (519)
Q Consensus 101 ~~dv~~yd~~t~~W--~~~~~~g~~P~--~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~ 173 (519)
...++++++.+..= ..+.. .+. +....+...-.+++ |++...... ..+.++.+|..+. .|..+. .
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~---~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~---~ 278 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFG---AIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQ---G 278 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEES---CSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEE---C
T ss_pred CcEEEEEECCCCcccceEEEe---cCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEe---C
Confidence 45688888877542 22221 222 22223333344554 433332222 2368999998776 788876 2
Q ss_pred CCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCC---CceEEecCCCCCCCCcceeEEEEeCCEEEEE
Q 010034 174 VPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET---PGWTQLKLPGQAPSSRCGHTITSGGHYLLLF 250 (519)
Q Consensus 174 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t---~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~ 250 (519)
...... ......++++|+........ ..+...|+.+ ..|+.+... .... - +....++.|++.
T Consensus 279 ~~~~~~-~~~~~~g~~l~~~t~~~~~~---------~~l~~~d~~~~~~~~~~~l~~~---~~~~-~-~~s~~g~~lv~~ 343 (693)
T 3iuj_A 279 DLDADV-SLVDNKGSTLYLLTNRDAPN---------RRLVTVDAANPGPAHWRDLIPE---RQQV-L-TVHSGSGYLFAE 343 (693)
T ss_dssp SSSSCE-EEEEEETTEEEEEECTTCTT---------CEEEEEETTSCCGGGCEEEECC---CSSC-E-EEEEETTEEEEE
T ss_pred CCCceE-EEEeccCCEEEEEECCCCCC---------CEEEEEeCCCCCccccEEEecC---CCCE-E-EEEEECCEEEEE
Confidence 111111 11233478899887543211 2344456554 358876521 1111 1 444566776664
Q ss_pred eccCCCCCcccccceeCcEEEEEcCCCeEEEcc
Q 010034 251 GGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (519)
Q Consensus 251 GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~ 283 (519)
.-.. -...++++|+.......+.
T Consensus 344 ~~~~----------g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 344 YMVD----------ATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEET----------TEEEEEEECTTSCEEEEEC
T ss_pred EEEC----------CeeEEEEEECCCCeeEEee
Confidence 4322 1356899998876666554
No 113
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.83 E-value=4 Score=44.07 Aligned_cols=129 Identities=17% Similarity=0.059 Sum_probs=68.1
Q ss_pred EEEEECCcEEEEEcCc-CCCccCCcEEEEEcCCCcEEeeeecCCCC-CCC------CCC--CCc------ceeEEEEeCC
Q 010034 24 SAVNIGKSKVVVFGGL-VDKRFLSDVVVYDIDNKLWFQPECTGNGS-NGQ------VGP--GPR------AFHIAVAIDC 87 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~-~~~~~~~~~~~yd~~~~~W~~l~~~~~~~-~~~------~~p--~~R------~~h~~~~~~~ 87 (519)
......|+..+++++. +++.....++++|+.+++...+....... ++. ... ..| .......-++
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 3344455666666654 44333458999999999887765321100 000 000 000 1112222255
Q ss_pred eEEEEccccCCcCCCcEEEEECCCC---eEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 88 HMFIFGGRFGSRRLGDFWVLDTDIW---QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 88 ~iyv~GG~~~~~~~~dv~~yd~~t~---~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+.++++.. ..++++|+.++ .-..+.. ........+.-.+++.++++.. +.++.+|+.+++
T Consensus 121 ~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~-----~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~ 183 (741)
T 2ecf_A 121 QRLLFPLG------GELYLYDLKQEGKAAVRQLTH-----GEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASGR 183 (741)
T ss_dssp SEEEEEET------TEEEEEESSSCSTTSCCBCCC-----SSSCEEEEEECTTSSEEEEEET------TEEEEEETTTTE
T ss_pred CEEEEEeC------CcEEEEECCCCCcceEEEccc-----CCcccccccCCCCCCEEEEEeC------CcEEEEecCCCC
Confidence 55555543 57999999887 5443331 1111223333355555555532 369999999998
Q ss_pred EEEec
Q 010034 165 WMQLP 169 (519)
Q Consensus 165 W~~l~ 169 (519)
...+.
T Consensus 184 ~~~~~ 188 (741)
T 2ecf_A 184 QMQLT 188 (741)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88775
No 114
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.83 E-value=4.1 Score=42.43 Aligned_cols=233 Identities=11% Similarity=0.002 Sum_probs=104.6
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCC------cEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNK------LWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~------~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~ 102 (519)
++.+++.|+.+ ..+.+||+.+. ....+.... .... .-.+++. -+++.++.+|.... ...
T Consensus 77 ~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~-------~~~~-~v~~~~~s~~~~~l~~~~~~~~-~~~ 142 (615)
T 1pgu_A 77 GSQYLCSGDES-----GKVIVWGWTFDKESNSVEVNVKSEFQ-------VLAG-PISDISWDFEGRRLCVVGEGRD-NFG 142 (615)
T ss_dssp TCCEEEEEETT-----SEEEEEEEEEEGGGTEEEEEEEEEEE-------CCSS-CEEEEEECTTSSEEEEEECCSS-CSE
T ss_pred CCCEEEEecCC-----CEEEEEeCCCCcccccccccccchhh-------cccc-cEEEEEEeCCCCEEEEeccCCC-Ccc
Confidence 56677777653 34777777544 333332210 1111 1223333 25566666664432 223
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcE-EEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcc-cC
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR-CG 180 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r-~~ 180 (519)
.++.+|. .+-...- ..+.. .-.+++...++. +++.|+.++ .+..||..+.+-...- . ...... .-
T Consensus 143 ~v~~~d~--~~~~~~~---~~~~~-~v~~~~~~~~~~~~l~~~~~d~-----~v~vwd~~~~~~~~~~-~-~~~~~~~~v 209 (615)
T 1pgu_A 143 VFISWDS--GNSLGEV---SGHSQ-RINACHLKQSRPMRSMTVGDDG-----SVVFYQGPPFKFSASD-R-THHKQGSFV 209 (615)
T ss_dssp EEEETTT--CCEEEEC---CSCSS-CEEEEEECSSSSCEEEEEETTT-----EEEEEETTTBEEEEEE-C-SSSCTTCCE
T ss_pred EEEEEEC--CCcceee---ecCCc-cEEEEEECCCCCcEEEEEeCCC-----cEEEEeCCCcceeeee-c-ccCCCCceE
Confidence 5666663 3221111 11111 122333334443 677776553 4888898776544332 1 111100 11
Q ss_pred eeEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCC
Q 010034 181 HTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGW 258 (519)
Q Consensus 181 ~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~ 258 (519)
.++... + +..++.|+.. ..+..||..+.+....-..........-.++...++..++.|+.+
T Consensus 210 ~~~~~~~~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---- 273 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSD------------RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD---- 273 (615)
T ss_dssp EEEEECSTTCCEEEEEETT------------CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT----
T ss_pred EEEEECCCCCCEEEEEeCC------------CeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCC----
Confidence 223333 4 6677777653 234556776665443320000011111112222266666766643
Q ss_pred cccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCC
Q 010034 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (519)
Q Consensus 259 ~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~ 313 (519)
..+.+||+.+.+-...-.....+......++...++..++.|+.++.
T Consensus 274 --------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 274 --------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 320 (615)
T ss_dssp --------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSC
T ss_pred --------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCC
Confidence 35788998876654432221111111222333336666777776553
No 115
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.82 E-value=1.8 Score=47.34 Aligned_cols=215 Identities=10% Similarity=0.031 Sum_probs=108.5
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCC---------c
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS---------R 99 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~---------~ 99 (519)
.|++.++|+...++.....++++|+.+++....... ..+. ...+...++-++++..... .
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~----------~~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK----------WVKF-SGLAWLGNDALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE----------EEES-CCCEESTTSEEEEEECCCC--------CC
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC----------Ccee-ccEEEECCCEEEEEEecCcccccccccCC
Confidence 455666665543333345799999999987654211 0011 1112221143334333221 1
Q ss_pred CCCcEEEEECCCCeE--EEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC--c-EEEeccCCCC
Q 010034 100 RLGDFWVLDTDIWQW--SELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL--E-WMQLPVTGSV 174 (519)
Q Consensus 100 ~~~dv~~yd~~t~~W--~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~-W~~l~~~~~~ 174 (519)
....++++++.+..- ..+.. ....+....+...-.+|+..++.........+.++.+|+.+. . |..+.. .
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~---~ 315 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFA--TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP---D 315 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC---S
T ss_pred CCCEEEEEECCCCchhCEEEec--cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC---C
Confidence 245688888876642 22221 111122233333445554444443333223578999999887 7 888862 1
Q ss_pred CCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCC--CceEEecCCCCCCCCcceeEEEEeCCEEEEEec
Q 010034 175 PPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET--PGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGG 252 (519)
Q Consensus 175 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t--~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG 252 (519)
..... ......++.||+........ ..++.+|+++ ..|+.+... ... .-..+...++.+++...
T Consensus 316 ~~~~~-~~~~~dg~~l~~~s~~~~~~---------~~l~~~d~~~~~~~~~~l~~~---~~~-~l~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 316 LKAQW-DFVDGVGDQLWFVSGDGAPL---------KKIVRVDLSGSTPRFDTVVPE---SKD-NLESVGIAGNRLFASYI 381 (741)
T ss_dssp SSSCE-EEEEEETTEEEEEECTTCTT---------CEEEEEECSSSSCEEEEEECC---CSS-EEEEEEEEBTEEEEEEE
T ss_pred CCceE-EEEeccCCEEEEEECCCCCC---------CEEEEEeCCCCccccEEEecC---CCC-eEEEEEEECCEEEEEEE
Confidence 11111 11223466788775432211 3345567776 579887621 111 11223345777777664
Q ss_pred cCCCCCcccccceeCcEEEEEcCCCeEEEcc
Q 010034 253 HGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (519)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~ 283 (519)
.+. ...+|++|+....-..+.
T Consensus 382 ~dg----------~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 382 HDA----------KSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp ETT----------EEEEEEEETTSCEEEECB
T ss_pred ECC----------EEEEEEEeCCCCceeecc
Confidence 332 356899997665445443
No 116
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.77 E-value=2.5 Score=41.31 Aligned_cols=112 Identities=12% Similarity=-0.014 Sum_probs=64.1
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEEC
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
.+++.|+.+ ..+.+||+.+......... ......-.+++.. ++.+++.|+.++ .+.++|+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~--------~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~ 148 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQG--------MGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDF 148 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECC--------CSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEET
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeec--------CCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEEC
Confidence 577777653 4588999998876654321 0111122333333 346677776543 5889999
Q ss_pred CCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEe
Q 010034 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (519)
Q Consensus 110 ~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l 168 (519)
.+.....+... ......-.+++...++..++.|+.++ .+..||+....-..+
T Consensus 149 ~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~ 200 (383)
T 3ei3_B 149 SGSVIQVFAKT--DSWDYWYCCVDVSVSRQMLATGDSTG-----RLLLLGLDGHEIFKE 200 (383)
T ss_dssp TSCEEEEEECC--CCSSCCEEEEEEETTTTEEEEEETTS-----EEEEEETTSCEEEEE
T ss_pred CCCceEEEecc--CCCCCCeEEEEECCCCCEEEEECCCC-----CEEEEECCCCEEEEe
Confidence 98777766521 11111223344445667777777654 488899865544444
No 117
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.74 E-value=9.5 Score=41.57 Aligned_cols=196 Identities=10% Similarity=0.053 Sum_probs=104.3
Q ss_pred EEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcE
Q 010034 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDF 104 (519)
Q Consensus 25 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv 104 (519)
.+...++.|++-.. +-+++||+.+.++.... ......-.+++..++.|+|... +.+
T Consensus 68 i~~d~~g~lWigT~-------~Gl~~yd~~~~~f~~~~----------~~~~~~i~~i~~~~g~lWigt~-------~Gl 123 (758)
T 3ott_A 68 GVIIDNTYLYMGTD-------NGILVYNYRADRYEQPE----------TDFPTDVRTMALQGDTLWLGAL-------NGL 123 (758)
T ss_dssp EEEETTTEEEEEET-------TEEEEEETTTTEECCCS----------CCCCSCEEEEEEETTEEEEEET-------TEE
T ss_pred EEEcCCCcEEEEeC-------CCeEEEeCCCCEEECcc----------cCCCceEEEEEecCCcEEEEcC-------Ccc
Confidence 34456678887432 34789999988765411 0111112233345778887422 248
Q ss_pred EEEECCCCeEEEEeeC-CCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCC-CcccCee
Q 010034 105 WVLDTDIWQWSELTSF-GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVP-PPRCGHT 182 (519)
Q Consensus 105 ~~yd~~t~~W~~~~~~-g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p-~~r~~~~ 182 (519)
++||+.++++...... ..+|... -.+++...++.|+|.. .+.+++||+.+.++..+....... ....-.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWigt-------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 195 (758)
T 3ott_A 124 YTYQLQSRKLTSFDTRRNGLPNNT-IYSIIRTKDNQIYVGT-------YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNS 195 (758)
T ss_dssp EEEETTTCCEEEECHHHHCCSCSC-EEEEEECTTCCEEEEE-------TTEEEEEETTTTEEEEECCCCCTTCSSCCEEE
T ss_pred eeEeCCCCeEEEeccCCCCcCCCe-EEEEEEcCCCCEEEEe-------CCCHhhCccCCCceEEecCCCccccccceeEE
Confidence 9999999988876311 1222221 1233333466888742 135899999999887764211100 0111122
Q ss_pred EEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCc
Q 010034 183 ATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (519)
Q Consensus 183 ~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~ 259 (519)
+... + +.|+|-. . ..+..||+.++++.... .++... -.+++. .++.|+|.. .
T Consensus 196 i~~d~~~~~lWigt-~-------------~Gl~~~~~~~~~~~~~~---~l~~~~-i~~i~~d~~g~lWigT--~----- 250 (758)
T 3ott_A 196 LLEDTTRQCVWIGT-E-------------GYLFQYFPSTGQIKQTE---AFHNNS-IKSLALDGNGDLLAGT--D----- 250 (758)
T ss_dssp EEEETTTTEEEEEE-E-------------EEEEEEETTTTEEEEEE---EEEEEE-EEEEEECTTCCEEEEE--T-----
T ss_pred EEEECCCCEEEEEE-C-------------CCCeEEcCCCCeEEecc---CCCCCe-EEEEEEcCCCCEEEEe--C-----
Confidence 3333 2 3577621 1 23456788888887654 222111 112222 355676632 1
Q ss_pred ccccceeCcEEEEEcCCCeEEEccc
Q 010034 260 SRYDIYYNDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 260 ~~~~~~~~~v~~yd~~t~~W~~v~~ 284 (519)
+-+++||+.+..+..+..
T Consensus 251 -------~Gl~~~~~~~~~~~~~~~ 268 (758)
T 3ott_A 251 -------NGLYVYHNDTTPLQHIIH 268 (758)
T ss_dssp -------TEEEEECCTTSCCEEECC
T ss_pred -------CceeEEecCCCcEEEEEc
Confidence 236888888877766543
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.59 E-value=3.3 Score=41.56 Aligned_cols=180 Identities=9% Similarity=0.065 Sum_probs=90.4
Q ss_pred EEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECC
Q 010034 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (519)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (519)
++..+++.++.|+.++ .+.+||..+.+-...-. .+.. .-.+... ++.+++.|+.++. +..||+.
T Consensus 138 ~~~~d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~---~h~~--~v~~l~~-~~~~l~sg~~dg~-----i~vwd~~ 201 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN-----TIKIWDKNTLECKRILT---GHTG--SVLCLQY-DERVIITGSSDST-----VRVWDVN 201 (435)
T ss_dssp EEECCSSEEEEEESSS-----CEEEEESSSCCEEEEEC---CCSS--CEEEEEC-CSSEEEEEETTSC-----EEEEESS
T ss_pred EEEECCCEEEEEeCCC-----eEEEEeCCCCeEEEEEc---CCCC--cEEEEEE-CCCEEEEEcCCCe-----EEEEECC
Confidence 3345777788887654 58899998876544321 1111 1122333 4567788876654 8899998
Q ss_pred CCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEE
Q 010034 162 SLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (519)
Q Consensus 162 t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~ 241 (519)
+.+-...- .........+..++..++.|+.++ .+..||..+..-..... ..........++
T Consensus 202 ~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~dg------------~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~ 262 (435)
T 1p22_A 202 TGEMLNTL-----IHHCEAVLHLRFNNGMMVTCSKDR------------SIAVWDMASPTDITLRR--VLVGHRAAVNVV 262 (435)
T ss_dssp SCCEEEEE-----CCCCSCEEEEECCTTEEEEEETTS------------CEEEEECSSSSCCEEEE--EECCCSSCEEEE
T ss_pred CCcEEEEE-----cCCCCcEEEEEEcCCEEEEeeCCC------------cEEEEeCCCCCCceeee--EecCCCCcEEEE
Confidence 87654432 111112233334555666666432 33445665543221100 000001111222
Q ss_pred EeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEccCCCC
Q 010034 242 SGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (519)
Q Consensus 242 ~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~ 313 (519)
..++..++.|+.+ ..+.+||+.+..-...-.. ....-.++..++.+++.|+.++.
T Consensus 263 ~~~~~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~g~~dg~ 317 (435)
T 1p22_A 263 DFDDKYIVSASGD------------RTIKVWNTSTCEFVRTLNG-----HKRGIACLQYRDRLVVSGSSDNT 317 (435)
T ss_dssp EEETTEEEEEETT------------SEEEEEETTTCCEEEEEEC-----CSSCEEEEEEETTEEEEEETTSC
T ss_pred EeCCCEEEEEeCC------------CeEEEEECCcCcEEEEEcC-----CCCcEEEEEeCCCEEEEEeCCCe
Confidence 2345555556533 3578899877654322111 11122334446677888886653
No 119
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.55 E-value=8.6 Score=40.63 Aligned_cols=125 Identities=12% Similarity=0.055 Sum_probs=66.4
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEc-CCC--cEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDI-DNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~-~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~ 106 (519)
+++||+.... ...++++|. .++ .|+.-....... .+.+.+.......++.+++||+... -..++.
T Consensus 62 ~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~a 129 (571)
T 2ad6_A 62 GDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDAST-KAVMCCDVVDRGLAYGAGQIVKKQA------NGHLLA 129 (571)
T ss_dssp TTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGG-GGGCTTCSCCCCCEEETTEEEEECT------TSEEEE
T ss_pred CCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccc-cccccccccccccEEECCEEEEEeC------CCEEEE
Confidence 4789997653 246999999 776 487643110000 0000000112234567888888743 135999
Q ss_pred EECCCC--eEEEEeeCCCCCCC-CCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEec
Q 010034 107 LDTDIW--QWSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLP 169 (519)
Q Consensus 107 yd~~t~--~W~~~~~~g~~P~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~ 169 (519)
+|..++ .|+.-.. ..+.. ....+.++. ++.+|+-.+......-..++.||+.|.+ |+.-.
T Consensus 130 lD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 130 LDAKTGKINWEVEVC--DPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EECCCCCEEEEecCC--CCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 999887 5875431 11111 111222334 4588775432111123569999998765 87653
No 120
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.48 E-value=5.5 Score=38.26 Aligned_cols=71 Identities=13% Similarity=0.209 Sum_probs=40.1
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCC--CeEEEEeeCCCCCCCCC-ccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDI--WQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t--~~W~~~~~~g~~P~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
+++.++.|+.++ .+.++|+.. ..+..+.. +..... -.+++...++.+++.|+.++. +..+|..+
T Consensus 118 ~g~~las~s~D~-----~v~iwd~~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~~-----i~iW~~~~ 184 (330)
T 2hes_X 118 DGYYLATCSRDK-----SVWIWETDESGEEYECISV---LQEHSQDVKHVIWHPSEALLASSSYDDT-----VRIWKDYD 184 (330)
T ss_dssp TSCEEEEEETTS-----CEEEEECCTTCCCCEEEEE---ECCCSSCEEEEEECSSSSEEEEEETTSC-----EEEEEEET
T ss_pred CCCEEEEEeCCC-----EEEEEeccCCCCCeEEEEE---eccCCCceEEEEECCCCCEEEEEcCCCe-----EEEEECCC
Confidence 567777777654 478888843 33444332 111111 122223345577788877653 77788777
Q ss_pred CcEEEec
Q 010034 163 LEWMQLP 169 (519)
Q Consensus 163 ~~W~~l~ 169 (519)
..|..+.
T Consensus 185 ~~~~~~~ 191 (330)
T 2hes_X 185 DDWECVA 191 (330)
T ss_dssp TEEEEEE
T ss_pred CCeeEEE
Confidence 7776654
No 121
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.47 E-value=5.7 Score=38.21 Aligned_cols=249 Identities=12% Similarity=-0.013 Sum_probs=124.9
Q ss_pred EEEECCcEEEEEcCcCCCc-------------------cCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe
Q 010034 25 AVNIGKSKVVVFGGLVDKR-------------------FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI 85 (519)
Q Consensus 25 ~~~~~~~~lyv~GG~~~~~-------------------~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~ 85 (519)
+++..++.+|+.+..+..- ..+.+.++|+.+++....... .... .-+.+++.
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------~~~~-~p~gia~d 99 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK--------NLFY-LPHGLSID 99 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT--------TTCS-SEEEEEEC
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC--------CccC-CceEEEEC
Confidence 3334567899877643210 114699999988776443211 1111 12334443
Q ss_pred -CCeEEEEccccCCcCCCcEEEEECCCC--eEEEEeeCC---CCCCCCCcc-EEEEEC-CcEEEEEecCCCCcCCCcEEE
Q 010034 86 -DCHMFIFGGRFGSRRLGDFWVLDTDIW--QWSELTSFG---DLPSPRDFA-AASAIG-NRKIVMYGGWDGKKWLSDVYV 157 (519)
Q Consensus 86 -~~~iyv~GG~~~~~~~~dv~~yd~~t~--~W~~~~~~g---~~P~~r~~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~ 157 (519)
++++|+..... ..+.+||+... .-..+...+ ..+...... .+++.. ++.+|+..++. .+.+.+
T Consensus 100 ~~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~ 170 (329)
T 3fvz_A 100 TDGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQ 170 (329)
T ss_dssp TTSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS----CCEEEE
T ss_pred CCCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC----CCeEEE
Confidence 57899875432 45889998765 222222110 001111122 333333 67999997632 245889
Q ss_pred EECCCCcEEEeccCCCC----CCccc-CeeEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCC
Q 010034 158 LDTISLEWMQLPVTGSV----PPPRC-GHTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQ 230 (519)
Q Consensus 158 yd~~t~~W~~l~~~~~~----p~~r~-~~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~ 230 (519)
||.....-..+...+.. +.... -+.+++. + +.|||....+ +.+.+||+++++....-. .
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~------------~~I~~~~~~~G~~~~~~~--~ 236 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN------------GRIQCFKTDTKEFVREIK--H 236 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT------------TEEEEEETTTCCEEEEEC--C
T ss_pred EcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC------------CEEEEEECCCCcEEEEEe--c
Confidence 99654443333221111 11111 2334443 4 7999986431 456778888666654321 1
Q ss_pred CCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEcc
Q 010034 231 APSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGG 309 (519)
Q Consensus 231 ~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG 309 (519)
......-.+++...+.+|...|...-. +.....+.++|+.+.+....-... ......-++++.- ++.+||...
T Consensus 237 ~~~~~~~~~~~~~pg~~~~~~g~~~v~-----~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 237 ASFGRNVFAISYIPGFLFAVNGKPYFG-----DQEPVQGFVMNFSSGEIIDVFKPV-RKHFDMPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp TTTTTCEEEEEEETTEEEEEECCCCTT-----CSCCCCEEEEETTTCCEEEEECCS-SSCCSSEEEEEECTTSEEEEEES
T ss_pred cccCCCcceeeecCCEEEEeCCCEEec-----cCCCcEEEEEEcCCCeEEEEEcCC-CCccCCeeEEEECCCCCEEEEEC
Confidence 111112223444457777777643211 123467999998877665432110 0111222344433 468998875
Q ss_pred CC
Q 010034 310 FD 311 (519)
Q Consensus 310 ~~ 311 (519)
.+
T Consensus 311 ~~ 312 (329)
T 3fvz_A 311 HT 312 (329)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 122
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.47 E-value=2.2 Score=41.54 Aligned_cols=186 Identities=8% Similarity=0.016 Sum_probs=92.4
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++++++.||.++ .+.++|..++.|.........+ ...-.+++.-.++..++.|+.++. +..+|..+..+
T Consensus 27 ~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~g~~l~s~s~D~~-----v~iw~~~~~~~ 95 (345)
T 3fm0_A 27 AGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWSPCGNYLASASFDAT-----TCIWKKNQDDF 95 (345)
T ss_dssp TSSCEEEEETTS-----CEEEEEEETTEEEEEEEECSSC-SSCEEEEEECTTSSEEEEEETTSC-----EEEEEECCC-E
T ss_pred CCCEEEEEcCCC-----eEEEEEcCCCcceeeeeecccc-CCcEEEEEECCCCCEEEEEECCCc-----EEEEEccCCCe
Confidence 567777887654 4788888888876443210111 111223333356677788887654 67778777776
Q ss_pred EEeccCCCCCCcccCe-eEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCC-ceEEecCCCCCCCCcceeEEEE
Q 010034 166 MQLPVTGSVPPPRCGH-TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP-GWTQLKLPGQAPSSRCGHTITS 242 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~-~W~~i~~~g~~P~~r~~~s~~~ 242 (519)
..+. .+..-.... ++... ++++++.|+.+. .+..+|+.+. .+..+........ .. .+++.
T Consensus 96 ~~~~---~~~~h~~~v~~v~~sp~~~~l~s~s~D~------------~v~iwd~~~~~~~~~~~~~~~h~~-~v-~~~~~ 158 (345)
T 3fm0_A 96 ECVT---TLEGHENEVKSVAWAPSGNLLATCSRDK------------SVWVWEVDEEDEYECVSVLNSHTQ-DV-KHVVW 158 (345)
T ss_dssp EEEE---EECCCSSCEEEEEECTTSSEEEEEETTS------------CEEEEEECTTSCEEEEEEECCCCS-CE-EEEEE
T ss_pred EEEE---EccCCCCCceEEEEeCCCCEEEEEECCC------------eEEEEECCCCCCeEEEEEecCcCC-Ce-EEEEE
Confidence 5543 111111112 22222 566777776542 2334555443 2332221001111 11 12222
Q ss_pred -eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 243 -GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 243 -~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
-++.+++.|+.+ ..+.+||..+..|..+..... ....-.+++.. ++++++.|+.++.
T Consensus 159 ~p~~~~l~s~s~d------------~~i~~w~~~~~~~~~~~~~~~--h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 159 HPSQELLASASYD------------DTVKLYREEEDDWVCCATLEG--HESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp CSSSSCEEEEETT------------SCEEEEEEETTEEEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCCEEEEEeCC------------CcEEEEEecCCCEEEEEEecC--CCCceEEEEECCCCCEEEEEeCCCe
Confidence 345666666643 347888888888875543211 01112222222 5677788876654
No 123
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.39 E-value=2.8 Score=44.65 Aligned_cols=238 Identities=13% Similarity=-0.022 Sum_probs=115.6
Q ss_pred CCcEEEEEcC--C-CcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccC-----CcCCCcEEEEECCC-----
Q 010034 45 LSDVVVYDID--N-KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG-----SRRLGDFWVLDTDI----- 111 (519)
Q Consensus 45 ~~~~~~yd~~--~-~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~-----~~~~~dv~~yd~~t----- 111 (519)
...+|.+++. . ..-..+..... .....+....+..-+++.+++..... .....+++++|+.+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~-----~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSA-----VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCC-----STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred CCeEEEEcCCCCCCCCCEeccCCcc-----CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 3568999887 3 55555542100 00112222333333555544544331 12235799999988
Q ss_pred -CeEEEEe-eCCCCCCCCCccEEEEECCcEEEEEecCCCC-c--CCCcEEEEECC-CC---cEEEeccCCCCCCcccCee
Q 010034 112 -WQWSELT-SFGDLPSPRDFAAASAIGNRKIVMYGGWDGK-K--WLSDVYVLDTI-SL---EWMQLPVTGSVPPPRCGHT 182 (519)
Q Consensus 112 -~~W~~~~-~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~-~--~~~~v~~yd~~-t~---~W~~l~~~~~~p~~r~~~~ 182 (519)
+....+. . ........+.-.+|+..++...+.. . ....++.+|+. +. +...+.. .. ......
T Consensus 176 ~~~~~~l~~~-----~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~---~~-~~~~~~ 246 (662)
T 3azo_A 176 RSAVRELSDD-----AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG---GP-EEAIAQ 246 (662)
T ss_dssp GGGSEESSCS-----CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE---ET-TBCEEE
T ss_pred CCceeEEEec-----CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC---CC-CceEcc
Confidence 6655543 2 1112222233345554444443321 1 13579999998 57 4454431 10 111122
Q ss_pred EEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCC-CCCCCcc---eeEEEE-eCCEEEEEeccCCC
Q 010034 183 ATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPG-QAPSSRC---GHTITS-GGHYLLLFGGHGTG 256 (519)
Q Consensus 183 ~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g-~~P~~r~---~~s~~~-~~~~iyv~GG~~~~ 256 (519)
.... ++++|+.+...+. ..++.+|+.++++..+.... ..-.+.. ..+.+. -++++++.+.. .
T Consensus 247 ~~~spdg~l~~~~~~~~~----------~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~- 314 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGW----------WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G- 314 (662)
T ss_dssp EEECTTSCEEEEECTTSS----------CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S-
T ss_pred eEECCCCeEEEEECCCCC----------eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C-
Confidence 2222 5677766654321 24566688888888875211 0000100 112333 36677666653 2
Q ss_pred CCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEE-EEeCCEEEEEccCCCCCCccceEEecC
Q 010034 257 GWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSM-TCLGSLYLLFGGFDGKSTFGDIWWLVP 324 (519)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~-v~~~~~iyv~GG~~~~~~~~D~w~l~~ 324 (519)
...+|.+|+.+...+.+... ......+ ..-++.+++..+... ...++|.++.
T Consensus 315 ---------~~~l~~~d~~~~~~~~l~~~-----~~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~ 367 (662)
T 3azo_A 315 ---------AAVLGILDPESGELVDAAGP-----WTEWAATLTVSGTRAVGVAASPR--TAYEVVELDT 367 (662)
T ss_dssp ---------SCEEEEEETTTTEEEECCSS-----CCEEEEEEEEETTEEEEEEEETT--EEEEEEEEET
T ss_pred ---------ccEEEEEECCCCcEEEecCC-----CCeEEEEEecCCCEEEEEEcCCC--CCCEEEEEEC
Confidence 25689999988887776542 1122233 334566665544321 2334565543
No 124
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.28 E-value=5.4 Score=37.34 Aligned_cols=55 Identities=15% Similarity=-0.026 Sum_probs=29.1
Q ss_pred eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEE-cccCCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 243 ~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
.++.+++.+|... +.+.+||..+.+-.. +... ...-.+++.. ++.+++.||.++.
T Consensus 251 ~~~~~~~~sg~~d-----------~~i~iwd~~~~~~~~~l~gH-----~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 251 HYKELISGHGFAQ-----------NQLVIWKYPTMAKVAELKGH-----TSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp TTTEEEEEECTTT-----------CCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTSSCEEEEETTTE
T ss_pred cccceEEEEEcCC-----------CEEEEEECCCCcEEEEEcCC-----CCCEEEEEEcCCCCEEEEEecCCe
Confidence 4566666666433 457889987654322 2111 1111222322 5778888887653
No 125
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.17 E-value=6.7 Score=38.15 Aligned_cols=177 Identities=12% Similarity=-0.000 Sum_probs=85.3
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
++..++.|+.+ ..+.++|+.+++-...-. .+... -.+.... .++..++.|+.++. +..||+.+.
T Consensus 165 ~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~~---~h~~~-v~~~~~~~~~~g~~l~sgs~Dg~-----v~~wd~~~~ 230 (354)
T 2pbi_B 165 SDMQILTASGD-----GTCALWDVESGQLLQSFH---GHGAD-VLCLDLAPSETGNTFVSGGCDKK-----AMVWDMRSG 230 (354)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEEEE---CCSSC-EEEEEECCCSSCCEEEEEETTSC-----EEEEETTTC
T ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEEc---CCCCC-eEEEEEEeCCCCCEEEEEeCCCe-----EEEEECCCC
Confidence 34455555544 358899998876543321 11111 1112221 23467788887654 889999888
Q ss_pred cEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCccee-EEE
Q 010034 164 EWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH-TIT 241 (519)
Q Consensus 164 ~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~-s~~ 241 (519)
+....- ..... .-.++... ++.+++.|+.+. .+..||+.++.-...-. ........ ++.
T Consensus 231 ~~~~~~---~~h~~-~v~~v~~~p~~~~l~s~s~D~------------~v~lwd~~~~~~~~~~~---~~~~~~~~~~~~ 291 (354)
T 2pbi_B 231 QCVQAF---ETHES-DVNSVRYYPSGDAFASGSDDA------------TCRLYDLRADREVAIYS---KESIIFGASSVD 291 (354)
T ss_dssp CEEEEE---CCCSS-CEEEEEECTTSSEEEEEETTS------------CEEEEETTTTEEEEEEC---CTTCCSCEEEEE
T ss_pred cEEEEe---cCCCC-CeEEEEEeCCCCEEEEEeCCC------------eEEEEECCCCcEEEEEc---CCCcccceeEEE
Confidence 765432 11111 11122222 456677776532 23446666654332221 11111122 222
Q ss_pred E-eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeE-EEcccCCCCCCCCcceEEEE-eCCEEEEEccCCC
Q 010034 242 S-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQW-KRLPIGNEPPPARAYHSMTC-LGSLYLLFGGFDG 312 (519)
Q Consensus 242 ~-~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W-~~v~~~~~~p~~R~~~~~v~-~~~~iyv~GG~~~ 312 (519)
. .++.+++.|+.+ ..+.+||+.+..= ..+... ...-.++.. -++.+++.|+.++
T Consensus 292 ~s~~g~~l~~g~~d------------~~i~vwd~~~~~~~~~l~~h-----~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 292 FSLSGRLLFAGYND------------YTINVWDVLKGSRVSILFGH-----ENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ECTTSSEEEEEETT------------SCEEEEETTTCSEEEEECCC-----SSCEEEEEECTTSSCEEEEETTS
T ss_pred EeCCCCEEEEEECC------------CcEEEEECCCCceEEEEECC-----CCcEEEEEECCCCCEEEEEcCCC
Confidence 2 456666666533 3578889865432 222111 111122222 2567777787665
No 126
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.03 E-value=7.5 Score=39.08 Aligned_cols=151 Identities=12% Similarity=0.119 Sum_probs=72.8
Q ss_pred EEEEEcCcCCCccCCcEEEEEcC--CCcEEee-eecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDID--NKLWFQP-ECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~--~~~W~~l-~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.|++.|+.+ ..+.+||+. +...... ... ..+..-.+++.. +++.++.|+.+ ..++.+
T Consensus 116 ~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~ 176 (450)
T 2vdu_B 116 RLIACADSD-----KSLLVFDVDKTSKNVLKLRKRF---------CFSKRPNAISIAEDDTTVIIADKF-----GDVYSI 176 (450)
T ss_dssp EEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEE---------ECSSCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred EEEEEECCC-----CeEEEEECcCCCCceeeeeecc---------cCCCCceEEEEcCCCCEEEEEeCC-----CcEEEE
Confidence 456777754 457788887 5443222 110 011111223332 56666777643 357888
Q ss_pred ECCCCeEEEEeeCCCCCC-CCCccEEEEECC---cEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeE
Q 010034 108 DTDIWQWSELTSFGDLPS-PRDFAAASAIGN---RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTA 183 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~-~r~~~~~~~~~~---~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~ 183 (519)
|..+........ ..+.. ...-.+++...+ +++++.|+.++ .+.+||+.+.+....-..+ .........
T Consensus 177 ~~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~--h~~~v~~~~ 248 (450)
T 2vdu_B 177 DINSIPEEKFTQ-EPILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----HIKISHYPQCFIVDKWLFG--HKHFVSSIC 248 (450)
T ss_dssp ETTSCCCSSCCC-CCSEECSSCEEEEEEEECTTSCEEEEEEETTS-----CEEEEEESCTTCEEEECCC--CSSCEEEEE
T ss_pred ecCCcccccccc-eeeecccCceEEEEEcCCCCCCcEEEEEcCCC-----cEEEEECCCCceeeeeecC--CCCceEEEE
Confidence 887654321000 00110 111223333445 67888888664 4888998877644331111 111111122
Q ss_pred EEeCCEEEEEcccCCCCCcccccccccccccccCCCCce
Q 010034 184 TMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW 222 (519)
Q Consensus 184 ~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W 222 (519)
.. ++++++.|+.+ ..+..||..+.+.
T Consensus 249 ~s-d~~~l~s~~~d------------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 249 CG-KDYLLLSAGGD------------DKIFAWDWKTGKN 274 (450)
T ss_dssp EC-STTEEEEEESS------------SEEEEEETTTCCE
T ss_pred EC-CCCEEEEEeCC------------CeEEEEECCCCcE
Confidence 22 66666777643 2344566666553
No 127
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.01 E-value=7 Score=40.62 Aligned_cols=229 Identities=10% Similarity=0.017 Sum_probs=103.6
Q ss_pred EECCcEEEEEcCcCCCccCCcEEEEEcCCC----cE-EeeeecCCCCCCCCCCCCc-ceeEEEEe--CCeEEEEccccCC
Q 010034 27 NIGKSKVVVFGGLVDKRFLSDVVVYDIDNK----LW-FQPECTGNGSNGQVGPGPR-AFHIAVAI--DCHMFIFGGRFGS 98 (519)
Q Consensus 27 ~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~----~W-~~l~~~~~~~~~~~~p~~R-~~h~~~~~--~~~iyv~GG~~~~ 98 (519)
...++..+++|+ + +.+.+||+.+. +- ..+. ..... ....+..- ++++++.|+.++
T Consensus 26 ~spdg~~l~~~~--~----~~v~v~~~~~~~~~~~~~~~~~----------~h~~~~v~~~~~sp~~~~~~l~s~~~dg- 88 (615)
T 1pgu_A 26 YDPTTNAIAYPC--G----KSAFVRCLDDGDSKVPPVVQFT----------GHGSSVVTTVKFSPIKGSQYLCSGDESG- 88 (615)
T ss_dssp EETTTTEEEEEE--T----TEEEEEECCSSCCSSCSEEEEC----------TTTTSCEEEEEECSSTTCCEEEEEETTS-
T ss_pred ECCCCCEEEEec--C----CeEEEEECCCCCCccccceEEe----------cCCCceEEEEEECcCCCCCEEEEecCCC-
Confidence 345566666666 1 36889998865 32 2221 11222 22222233 567777777643
Q ss_pred cCCCcEEEEECCCC------eEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCC
Q 010034 99 RRLGDFWVLDTDIW------QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG 172 (519)
Q Consensus 99 ~~~~dv~~yd~~t~------~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~ 172 (519)
.+.++|..++ ....+.... . ....-.+++...+++.++.+|.+.. ....++.+| +.+-...-
T Consensus 89 ----~v~vw~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d--~~~~~~~~--- 156 (615)
T 1pgu_A 89 ----KVIVWGWTFDKESNSVEVNVKSEFQ-V-LAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWD--SGNSLGEV--- 156 (615)
T ss_dssp ----EEEEEEEEEEGGGTEEEEEEEEEEE-C-CSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETT--TCCEEEEC---
T ss_pred ----EEEEEeCCCCcccccccccccchhh-c-ccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEE--CCCcceee---
Confidence 4778888654 333333210 1 1112233444455666666665432 134566666 33222111
Q ss_pred CCCCcccCeeEEEe-CCE-EEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCc-ceeEEEE-eC-CEE
Q 010034 173 SVPPPRCGHTATMV-EKR-LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSR-CGHTITS-GG-HYL 247 (519)
Q Consensus 173 ~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r-~~~s~~~-~~-~~i 247 (519)
..... .-.++... ++. +++.|+.+ ..+..||..+.+-...- . ...... .-.++.. .+ +..
T Consensus 157 ~~~~~-~v~~~~~~~~~~~~l~~~~~d------------~~v~vwd~~~~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 157 SGHSQ-RINACHLKQSRPMRSMTVGDD------------GSVVFYQGPPFKFSASD-R-THHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp CSCSS-CEEEEEECSSSSCEEEEEETT------------TEEEEEETTTBEEEEEE-C-SSSCTTCCEEEEEECSTTCCE
T ss_pred ecCCc-cEEEEEECCCCCcEEEEEeCC------------CcEEEEeCCCcceeeee-c-ccCCCCceEEEEEECCCCCCE
Confidence 11111 11222222 333 66666643 23445666554433221 0 111100 1123333 34 566
Q ss_pred EEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcc-cCCCCCCCCcceEEEEeCCEEEEEccCCC
Q 010034 248 LLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP-IGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (519)
Q Consensus 248 yv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~-~~~~~p~~R~~~~~v~~~~~iyv~GG~~~ 312 (519)
++.|+.+ ..+.+||+.+.+....- .... .....-.++...++.+++.|+.++
T Consensus 222 l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~l~~~~~d~ 274 (615)
T 1pgu_A 222 VITVGSD------------RKISCFDGKSGEFLKYIEDDQE-PVQGGIFALSWLDSQKFATVGADA 274 (615)
T ss_dssp EEEEETT------------CCEEEEETTTCCEEEECCBTTB-CCCSCEEEEEESSSSEEEEEETTS
T ss_pred EEEEeCC------------CeEEEEECCCCCEeEEeccccc-ccCCceEEEEEcCCCEEEEEcCCC
Confidence 6666643 35789998776644322 1000 001111222222777777777654
No 128
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=92.99 E-value=6.8 Score=37.72 Aligned_cols=221 Identities=10% Similarity=-0.036 Sum_probs=104.1
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.||.+ ..+.++|..+..-...-. .... .-.+++. -+++.++.||.++ .+.+|
T Consensus 65 ~d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~---------~~~~-~v~~~~~s~~~~~l~s~~~d~-----~v~iw 124 (340)
T 1got_B 65 TDSRLLLSASQD-----GKLIIWDSYTTNKVHAIP---------LRSS-WVMTCAYAPSGNYVACGGLDN-----ICSIY 124 (340)
T ss_dssp TTSSEEEEEETT-----TEEEEEETTTCCEEEEEE---------CSSS-CEEEEEECTTSSEEEEEETTC-----EEEEE
T ss_pred CCCCEEEEEeCC-----CcEEEEECCCCCcceEee---------cCCc-cEEEEEECCCCCEEEEEeCCC-----eEEEE
Confidence 445677777654 357888987765322211 1111 1122222 2567777777653 57888
Q ss_pred ECCCCe--EEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEE
Q 010034 108 DTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (519)
Q Consensus 108 d~~t~~--W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~ 185 (519)
|+.+.. ....... ...... -.++....++. ++.|+.++ .+..||+.+.+-...- .+ ... .-.++..
T Consensus 125 ~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~~~~~~~-~~--h~~-~v~~~~~ 192 (340)
T 1got_B 125 NLKTREGNVRVSREL-AGHTGY-LSCCRFLDDNQ-IVTSSGDT-----TCALWDIETGQQTTTF-TG--HTG-DVMSLSL 192 (340)
T ss_dssp ETTTCSBSCEEEEEE-ECCSSC-EEEEEEEETTE-EEEEETTS-----CEEEEETTTTEEEEEE-CC--CSS-CEEEEEE
T ss_pred ECccCCCcceeEEEe-cCCCcc-EEEEEECCCCc-EEEEECCC-----cEEEEECCCCcEEEEE-cC--CCC-ceEEEEE
Confidence 887642 1111100 011111 12223334545 44555443 3888999887654332 11 111 1122222
Q ss_pred e-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCccccc
Q 010034 186 V-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYD 263 (519)
Q Consensus 186 ~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~~ 263 (519)
. ++.+++.|+.++ .+..||+.+..-...- . ... ... .+++. .++..++.|+.+
T Consensus 193 ~~~~~~l~sg~~d~------------~v~~wd~~~~~~~~~~-~-~h~-~~v-~~v~~~p~~~~l~s~s~d--------- 247 (340)
T 1got_B 193 APDTRLFVSGACDA------------SAKLWDVREGMCRQTF-T-GHE-SDI-NAICFFPNGNAFATGSDD--------- 247 (340)
T ss_dssp CTTSSEEEEEETTS------------CEEEEETTTCSEEEEE-C-CCS-SCE-EEEEECTTSSEEEEEETT---------
T ss_pred CCCCCEEEEEeCCC------------cEEEEECCCCeeEEEE-c-CCc-CCE-EEEEEcCCCCEEEEEcCC---------
Confidence 2 566777777542 3444666655433221 0 111 111 12233 355666777643
Q ss_pred ceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe--CCEEEEEccCCC
Q 010034 264 IYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFDG 312 (519)
Q Consensus 264 ~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~--~~~iyv~GG~~~ 312 (519)
..+.+||+.+..-...... +.....-..+.+ ++.+++.|+.++
T Consensus 248 ---~~v~iwd~~~~~~~~~~~~---~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 248 ---ATCRLFDLRADQELMTYSH---DNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp ---SCEEEEETTTTEEEEEECC---TTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ---CcEEEEECCCCcEEEEEcc---CCcccceEEEEECCCCCEEEEECCCC
Confidence 3478889877653322111 111111222222 577888887665
No 129
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.92 E-value=7.1 Score=37.73 Aligned_cols=114 Identities=7% Similarity=-0.023 Sum_probs=54.0
Q ss_pred EEEEEcCcCCCccCC--cEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCC-eEEEEccccCCcCCCcEEEEE
Q 010034 32 KVVVFGGLVDKRFLS--DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~--~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~~~~~dv~~yd 108 (519)
..+++|.+.... .. .+|.+|..+++++.+... . ...| .+.++.-++ .||+.+........-.+|.+|
T Consensus 14 ~~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~-~------~~~p--~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~ 83 (361)
T 3scy_A 14 LTMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDA-E------VANP--SYLIPSADGKFVYSVNEFSKDQAAVSAFAFD 83 (361)
T ss_dssp EEEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEE-E------CSCC--CSEEECTTSSEEEEEECCSSTTCEEEEEEEE
T ss_pred eEEEEEeccCCC-CCCEEEEEEeCCCCCEEEeecc-c------CCCC--ceEEECCCCCEEEEEEccCCCCCcEEEEEEe
Confidence 445566654322 23 355567788888777532 1 1111 122222234 466665432111111245566
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
..+++.+.+.. .+..........+.++.+|+.+..+ ..+..|++.++
T Consensus 84 ~~~g~~~~~~~---~~~~~~~p~~~~~dg~~l~~~~~~~-----~~v~~~~~~~~ 130 (361)
T 3scy_A 84 KEKGTLHLLNT---QKTMGADPCYLTTNGKNIVTANYSG-----GSITVFPIGQD 130 (361)
T ss_dssp TTTTEEEEEEE---EECSSSCEEEEEECSSEEEEEETTT-----TEEEEEEBCTT
T ss_pred CCCCcEEEeeE---eccCCCCcEEEEECCCEEEEEECCC-----CEEEEEEeCCC
Confidence 66678877653 2211112222223444677665322 34778887643
No 130
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.89 E-value=0.93 Score=45.84 Aligned_cols=109 Identities=15% Similarity=0.091 Sum_probs=62.2
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE--eCCeEEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~--~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
++.+++.|+.++ .+.++|+.+..-...... ..... .-.+++. .++.+++.|+.++ .+.++
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~-------~gH~~-~V~~l~f~p~~~~~l~s~s~D~-----~v~iw 192 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG-------IGAGG-SITGLKFNPLNTNQFYASSMEG-----TTRLQ 192 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECC-------CSSSC-CCCEEEECSSCTTEEEEECSSS-----CEEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEc-------cCCCC-CEEEEEEeCCCCCEEEEEeCCC-----EEEEe
Confidence 356777887543 578889877654332211 01111 1123333 3566777777654 47889
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
|+.++....+.... .......+++...++.+++.|+.++ .+..+|+...
T Consensus 193 d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~ 241 (435)
T 4e54_B 193 DFKGNILRVFASSD--TINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGK 241 (435)
T ss_dssp ETTSCEEEEEECCS--SCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSC
T ss_pred eccCCceeEEeccC--CCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcc
Confidence 99988776655311 1122223444455667888887665 3788887654
No 131
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.84 E-value=4.9 Score=37.87 Aligned_cols=109 Identities=8% Similarity=0.037 Sum_probs=55.8
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe---CCeEEEEccccCCcCCCcEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGDFW 105 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~dv~ 105 (519)
.++..++.|+.+ ..+.+||+.......+.... .... .-.+++.. ++++++.|+.++ .+.
T Consensus 19 ~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~-------gH~~-~V~~v~~s~~~~g~~l~s~s~D~-----~v~ 80 (297)
T 2pm7_B 19 YYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLT-------GHEG-PVWRVDWAHPKFGTILASCSYDG-----KVM 80 (297)
T ss_dssp TTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEEC-------CCSS-CEEEEEECCGGGCSEEEEEETTT-----EEE
T ss_pred CCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEc-------cccC-CeEEEEecCCCcCCEEEEEcCCC-----EEE
Confidence 446677777754 34778888754433322110 1111 11222222 256777777654 478
Q ss_pred EEECCCCeEEEEeeCCCCCCCCCccEEEEE-CC--cEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAI-GN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 106 ~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~-~~--~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
++|+.++.|..+.. +......-.++.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 81 iWd~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~ 133 (297)
T 2pm7_B 81 IWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKEN 133 (297)
T ss_dssp EEEBSSSCBCCCEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSS
T ss_pred EEEcCCCceEEEEE---eecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCC
Confidence 89998877755432 1111111122223 22 45677777654 3667776654
No 132
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.81 E-value=7.5 Score=37.78 Aligned_cols=110 Identities=14% Similarity=0.014 Sum_probs=58.1
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCc-------EEeeeecCCCCCCCCCCCCcceeEEEEeC----C---eE
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL-------WFQPECTGNGSNGQVGPGPRAFHIAVAID----C---HM 89 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-------W~~l~~~~~~~~~~~~p~~R~~h~~~~~~----~---~i 89 (519)
.++.... .+++.|+.+ ..+.+||+.+.. -..+.. ...........-+ + ++
T Consensus 20 ~~~~~~~-~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 20 FSVSACN-SFTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFV----------HKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEECS-SEEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEEC----------CTTCEEEEEEEEEEETTTEEEEE
T ss_pred EEEEecC-CeEEEEcCC-----CEEEEEECCCcccccCCCcceEEec----------CCCcEEEEEEecccccCCccccE
Confidence 3444554 566666643 458889988776 223221 1111122222234 5 77
Q ss_pred EEEccccCCcCCCcEEEEECCCCe------EEEEeeCCCCCC---CCCccEEEEE----CCcEE-EEEecCCCCcCCCcE
Q 010034 90 FIFGGRFGSRRLGDFWVLDTDIWQ------WSELTSFGDLPS---PRDFAAASAI----GNRKI-VMYGGWDGKKWLSDV 155 (519)
Q Consensus 90 yv~GG~~~~~~~~dv~~yd~~t~~------W~~~~~~g~~P~---~r~~~~~~~~----~~~~i-yv~GG~~~~~~~~~v 155 (519)
++.|+.++ .+.+||..+.. +..+.. .+. ...-.+++.. .++.. ++.|+.++ .+
T Consensus 84 l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i 150 (397)
T 1sq9_A 84 VATTSFSG-----DLLFYRITREDETKKVIFEKLDL---LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TT 150 (397)
T ss_dssp EEEEETTS-----CEEEEEEEECTTTCCEEEEEECC---SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CE
T ss_pred EEEEcCCC-----CEEEEEccCCcccccccceeecc---cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cE
Confidence 77777653 47888887766 666652 211 1222344444 45566 77787654 37
Q ss_pred EEEECCC
Q 010034 156 YVLDTIS 162 (519)
Q Consensus 156 ~~yd~~t 162 (519)
..||+.+
T Consensus 151 ~iwd~~~ 157 (397)
T 1sq9_A 151 YIWKFHP 157 (397)
T ss_dssp EEEEEES
T ss_pred EEEeCCc
Confidence 7777665
No 133
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.79 E-value=5.7 Score=42.00 Aligned_cols=163 Identities=13% Similarity=0.125 Sum_probs=84.8
Q ss_pred CeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC--------CCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEE
Q 010034 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL--------PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (519)
Q Consensus 87 ~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~--------P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 158 (519)
..+|+..-.. +.+.++|..+.+=...-+.+.+ |.+|... .+...++..+++-= .....++..
T Consensus 256 k~l~v~n~~~-----~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~-i~~s~~~~~~vv~~----~~~g~v~~v 325 (567)
T 1qks_A 256 KYAIAGAYWP-----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA-ILASHYRPEFIVNV----KETGKILLV 325 (567)
T ss_dssp TEEEEEEEET-----TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE-EEECSSSSEEEEEE----TTTTEEEEE
T ss_pred CEEEEEEccC-----CeEEEEECCCCcEEEEEeccccccccccccCCCceEE-EEEcCCCCEEEEEe----cCCCeEEEE
Confidence 3566664322 4578999888654433222111 2333222 22222222333221 123458888
Q ss_pred ECCCCcEEEeccCCCCCCcccCeeEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEecCC-CCCCCCc
Q 010034 159 DTISLEWMQLPVTGSVPPPRCGHTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLP-GQAPSSR 235 (519)
Q Consensus 159 d~~t~~W~~l~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~-g~~P~~r 235 (519)
|..+.+...+. ..+..+.-|..... + .++|+.... -+.+.++|..+++-...-.. +..|.+.
T Consensus 326 d~~~~~~~~v~---~i~~~~~~~d~~~~pdgr~~~va~~~------------sn~V~ViD~~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 326 DYTDLNNLKTT---EISAERFLHDGGLDGSHRYFITAANA------------RNKLVVIDTKEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp ETTCSSEEEEE---EEECCSSEEEEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred ecCCCccceee---eeeccccccCceECCCCCEEEEEeCC------------CCeEEEEECCCCcEEEEEeccCcCCCCc
Confidence 88877655554 34445555555544 3 345554322 25566789988876544334 5667765
Q ss_pred ceeEEEEe-CCEEEEEeccCCCCCcccccceeCcEEEEEcCCC-----eEEEcccC
Q 010034 236 CGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA-----QWKRLPIG 285 (519)
Q Consensus 236 ~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~-----~W~~v~~~ 285 (519)
.+.....- .+.+|+.+-... +.|.++|..+. .|+.+...
T Consensus 391 ~g~~~~~p~~g~v~~t~~~g~-----------~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 391 RGANFVHPTFGPVWATSHMGD-----------DSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp TCEEEEETTTEEEEEEEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEE
T ss_pred cceeeECCCCCcEEEeCCCCC-----------CeEEEecCCCCCCccccCEEEEEE
Confidence 55443332 356777653221 45788887652 27666553
No 134
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.68 E-value=7.1 Score=37.16 Aligned_cols=128 Identities=8% Similarity=-0.031 Sum_probs=72.8
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (519)
..+...++.||+.+..+ ..+++||+.+++...+... + ...-++++.. ++++|+.+.... ....
T Consensus 49 ~~~~~~~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~---------~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~ 112 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFE-----GNIFKINPETKEIKRPFVS---------H-KANPAAIKIHKDGRLFVCYLGDF-KSTG 112 (333)
T ss_dssp EEEECTTSCEEEEETTT-----CEEEEECTTTCCEEEEEEC---------S-SSSEEEEEECTTSCEEEEECTTS-SSCC
T ss_pred CcEECCCCCEEEEECCC-----CEEEEEeCCCCcEEEEeeC---------C-CCCcceEEECCCCcEEEEeCCCC-CCCc
Confidence 33444567788876532 4689999999887765321 1 1122344443 568887753221 1124
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCC-CCcCCCcEEEEECCCCcEEEec
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~t~~W~~l~ 169 (519)
.+++||+.+.....+.. .......-..++...++.+|+..... .......++++|+.+.+...+.
T Consensus 113 ~i~~~d~~~~~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 178 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII 178 (333)
T ss_dssp EEEEECTTSCSCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE
T ss_pred eEEEEeCCCCEEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee
Confidence 69999999887654321 11122222344444567888765321 1122356999999887776653
No 135
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.60 E-value=6 Score=38.78 Aligned_cols=230 Identities=10% Similarity=0.055 Sum_probs=106.5
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeeeecCCCCCCCCCCCCcceeEEEEe-C-CeEEEEccccCCcCCCcE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGSRRLGDF 104 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~-~~iyv~GG~~~~~~~~dv 104 (519)
.++.+++.|+.+ ..+.+||+.+. ....+.... .... .-.+++.. + +++++.|+.++ .+
T Consensus 77 ~~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~~~~-------~h~~-~v~~~~~~~~~~~~l~s~~~dg-----~v 138 (416)
T 2pm9_A 77 HNNKIIAGALDN-----GSLELYSTNEANNAINSMARFS-------NHSS-SVKTVKFNAKQDNVLASGGNNG-----EI 138 (416)
T ss_dssp SSSSCEEEEESS-----SCEEEECCSSTTSCCCEEEECC-------CSSS-CCCEEEECSSSTTBEEEECSSS-----CE
T ss_pred CCCCeEEEEccC-----CeEEEeecccccccccchhhcc-------CCcc-ceEEEEEcCCCCCEEEEEcCCC-----eE
Confidence 445666666643 35788888761 111221110 1111 11233333 2 66777777553 47
Q ss_pred EEEECCCCe------EEEEeeCCCCCCCCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCc
Q 010034 105 WVLDTDIWQ------WSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (519)
Q Consensus 105 ~~yd~~t~~------W~~~~~~g~~P~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~ 177 (519)
.+||+.+.. -..... ........-.+++...+ +.+++.|+.++ .+..||+.+.+-...- ..+..
T Consensus 139 ~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~---~~~~~ 209 (416)
T 2pm9_A 139 FIWDMNKCTESPSNYTPLTPG-QSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIWDLKAKKEVIHL---SYTSP 209 (416)
T ss_dssp EBCBTTTTSSCTTTCCCBCCC-CSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEEETTTTEEEEEE---CCCCC
T ss_pred EEEECCCCccccccccccccc-cccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEEECCCCCcceEE---ecccc
Confidence 888887764 111100 00111112233344333 46778887654 3899999987755443 22211
Q ss_pred ----ccC-eeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-e-CCEEE
Q 010034 178 ----RCG-HTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G-GHYLL 248 (519)
Q Consensus 178 ----r~~-~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~-~~~iy 248 (519)
... .++... ++ .+++.|+..... ..+..||..+..-..... .......-.++.. . ++.++
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~---------~~i~~~d~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~~l 278 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDND---------PSILIWDLRNANTPLQTL--NQGHQKGILSLDWCHQDEHLL 278 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSS---------CCCCEEETTSTTSCSBCC--CSCCSSCEEEEEECSSCSSCE
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCC---------ceEEEEeCCCCCCCcEEe--ecCccCceeEEEeCCCCCCeE
Confidence 112 223333 33 567776654311 144556666542111110 0011111122333 2 56777
Q ss_pred EEeccCCCCCcccccceeCcEEEEEcCCCeEEE-cccCCCCCCCCcceEEEEe-CC-EEEEEccCCCC
Q 010034 249 LFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCL-GS-LYLLFGGFDGK 313 (519)
Q Consensus 249 v~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-v~~~~~~p~~R~~~~~v~~-~~-~iyv~GG~~~~ 313 (519)
+.|+.+ ..+.+||+.+.+-.. +.... ..-.++... ++ .+++.|+.++.
T Consensus 279 ~s~~~d------------g~v~~wd~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 279 LSSGRD------------NTVLLWNPESAEQLSQFPARG-----NWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp EEEESS------------SEEEEECSSSCCEEEEEECSS-----SCCCCEEECTTCTTEEEECCSSSE
T ss_pred EEEeCC------------CCEEEeeCCCCccceeecCCC-----CceEEEEECCCCCCEEEEEecCCc
Confidence 777643 357888887654322 22111 111223333 34 68888886653
No 136
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.57 E-value=1.2 Score=43.84 Aligned_cols=124 Identities=10% Similarity=0.019 Sum_probs=51.6
Q ss_pred ECCcEEEEEcCcCCCcc-CCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEE
Q 010034 28 IGKSKVVVFGGLVDKRF-LSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFW 105 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~-~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~ 105 (519)
..||.+++.|+.+.... -..++.|+..+..=...... ......-.-.+++.. ++++ +.|+.++ .+.
T Consensus 51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~------~~~~~~~~V~~~~~s~d~~~-l~~s~dg-----~v~ 118 (357)
T 4g56_B 51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT------AGVQTEAGVTDVAWVSEKGI-LVASDSG-----AVE 118 (357)
T ss_dssp CSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS------EEEECSSCEEEEEEETTTEE-EEEETTS-----CEE
T ss_pred CCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec------ccCCCCCCEEEEEEcCCCCE-EEEECCC-----EEE
Confidence 35678888887543222 13467776654321100000 000000011223333 4454 4555433 477
Q ss_pred EEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEe
Q 010034 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (519)
Q Consensus 106 ~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l 168 (519)
++|+.+++-..............-.+++...+++.++.|+.++. +..||+.+.+-...
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~-----v~iwd~~~~~~~~~ 176 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS-----VKVWDLSQKAVLKS 176 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC-----EEEEETTTTEEEEE
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe-----EEEEECCCCcEEEE
Confidence 88887654321110000000111123333456677788876654 88899988765443
No 137
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.51 E-value=5.9 Score=38.49 Aligned_cols=106 Identities=12% Similarity=0.012 Sum_probs=55.3
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~y 107 (519)
++.+++.|+.+ ..+.+||+.+.+-...... +.+......... ++.+++.|+.++ .+.+|
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~ 171 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNF---------EETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLC 171 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEEC---------SSCEEEEEECSSCSSCCEEEEEESSS-----SEEEE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccC---------CCceeeeEeecCCCCCcEEEEEcCCC-----eEEEE
Confidence 34566666643 4588899988765443321 111111111111 334677776553 58899
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcE-EEEEecCCCCcCCCcEEEEECCCC
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
|+.+..-...-. ... ..-.+++...++. +++.|+.++. +..||+.+.
T Consensus 172 d~~~~~~~~~~~---~~~-~~v~~~~~~~~~~~ll~~~~~dg~-----i~i~d~~~~ 219 (408)
T 4a11_B 172 DLKSGSCSHILQ---GHR-QEILAVSWSPRYDYILATASADSR-----VKLWDVRRA 219 (408)
T ss_dssp ESSSSCCCEEEC---CCC-SCEEEEEECSSCTTEEEEEETTSC-----EEEEETTCS
T ss_pred eCCCcceeeeec---CCC-CcEEEEEECCCCCcEEEEEcCCCc-----EEEEECCCC
Confidence 988764332221 111 1112233333433 7778876653 788888765
No 138
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.50 E-value=0.77 Score=45.15 Aligned_cols=110 Identities=13% Similarity=0.009 Sum_probs=58.8
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccC-CcCCCcEEEEECCCCeEEEEeeCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFG-SRRLGDFWVLDTDIWQWSELTSFGDL 123 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~-~~~~~dv~~yd~~t~~W~~~~~~g~~ 123 (519)
..++++|+.+++-..+... ..+..+....- +++.+++....+ ......++.+|+.+.....+.. .
T Consensus 168 ~~l~~~d~~~g~~~~l~~~----------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~ 234 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQE----------NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---H 234 (388)
T ss_dssp EEEEEEETTTCCEEEEEEE----------SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---C
T ss_pred ceEEEEECCCCceEEeecC----------CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---C
Confidence 5789999998876666422 11233334433 455444433221 1224579999998877666652 1
Q ss_pred CCCCCccEEEEECCcE-EEEEecCCCCcCCCcEEEEECCCCcEEEec
Q 010034 124 PSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 124 P~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~ 169 (519)
+........+.-.+++ |+......+ .....++++|+.+.+-+.+.
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCEEEEE
T ss_pred CCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCCceEEEE
Confidence 1111111222334444 444332222 11235999999999877765
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.43 E-value=5.5 Score=41.79 Aligned_cols=107 Identities=13% Similarity=0.004 Sum_probs=58.2
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-C-CeEEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~-~~iyv~GG~~~~~~~~dv~~y 107 (519)
++.+|+.+..+ +.+.++|..+++-...-.. ...-|.+++. + ..+|+.+. + +.+.+|
T Consensus 148 ~~~~~vs~~~d-----~~V~v~D~~t~~~~~~i~~-----------g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~ 205 (543)
T 1nir_A 148 PNLFSVTLRDA-----GQIALVDGDSKKIVKVIDT-----------GYAVHISRMSASGRYLLVIGR-D-----ARIDMI 205 (543)
T ss_dssp GGEEEEEEGGG-----TEEEEEETTTCCEEEEEEC-----------STTEEEEEECTTSCEEEEEET-T-----SEEEEE
T ss_pred CCEEEEEEcCC-----CeEEEEECCCceEEEEEec-----------CcccceEEECCCCCEEEEECC-C-----CeEEEE
Confidence 46788876542 4688899988765332211 1114555443 3 45666643 2 569999
Q ss_pred EC--CCCeEEEEeeCCCCCCCCCccEEEEEC----Cc-EEEEEecCCCCcCCCcEEEEECCCCcEEEe
Q 010034 108 DT--DIWQWSELTSFGDLPSPRDFAAASAIG----NR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (519)
Q Consensus 108 d~--~t~~W~~~~~~g~~P~~r~~~~~~~~~----~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l 168 (519)
|+ .+.+-... ++.+..-..++.-. ++ .+|+.. .. -+.+..+|..+.+-.+.
T Consensus 206 D~~~~t~~~~~~-----i~~g~~p~~va~sp~~~~dg~~l~v~~-~~----~~~v~v~D~~t~~~~~~ 263 (543)
T 1nir_A 206 DLWAKEPTKVAE-----IKIGIEARSVESSKFKGYEDRYTIAGA-YW----PPQFAIMDGETLEPKQI 263 (543)
T ss_dssp ETTSSSCEEEEE-----EECCSEEEEEEECCSTTCTTTEEEEEE-EE----SSEEEEEETTTCCEEEE
T ss_pred ECcCCCCcEEEE-----EecCCCcceEEeCCCcCCCCCEEEEEE-cc----CCeEEEEecccccccee
Confidence 99 66654322 22222223333333 44 555543 21 24578889888765443
No 140
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.28 E-value=9.4 Score=37.60 Aligned_cols=181 Identities=11% Similarity=-0.019 Sum_probs=91.6
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLP 124 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P 124 (519)
+.+.+||..+++....... .....-.+++.. ++++++.|+.++ .+.+||+.+++....-. ..
T Consensus 113 ~~v~lw~~~~~~~~~~~~~---------~~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~---~~ 175 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAET---------DESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTKLRTMA---GH 175 (401)
T ss_dssp TEEEEEETTTCCEEEEEEC---------CTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---CC
T ss_pred CeEEEeeCCCCcEeEeeec---------CCCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeEEEEec---CC
Confidence 4689999999887665432 111122233333 566777777553 58899998876544331 11
Q ss_pred CCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcc
Q 010034 125 SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIM 203 (519)
Q Consensus 125 ~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 203 (519)
..+ -.++...+ .+++.|+.++ .+..||+.+..-...... ... ..-.++... ++.+++.|+.+
T Consensus 176 ~~~--v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~-~~~--~~v~~~~~~~~~~~l~s~~~d------ 238 (401)
T 4aez_A 176 QAR--VGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQ-GHS--SEVCGLAWRSDGLQLASGGND------ 238 (401)
T ss_dssp SSC--EEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEE-CCS--SCEEEEEECTTSSEEEEEETT------
T ss_pred CCc--eEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEc-CCC--CCeeEEEEcCCCCEEEEEeCC------
Confidence 211 22233333 5677777654 488889874332111100 111 111222222 56677777653
Q ss_pred cccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEE
Q 010034 204 GDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK 280 (519)
Q Consensus 204 ~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 280 (519)
..+..||..+..-...-. ....+. .++.. .+..+++.||...+ ..+.+||+.+.+-.
T Consensus 239 ------~~v~iwd~~~~~~~~~~~--~~~~~v--~~~~~~p~~~~ll~~~~gs~d----------~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 239 ------NVVQIWDARSSIPKFTKT--NHNAAV--KAVAWCPWQSNLLATGGGTMD----------KQIHFWNAATGARV 297 (401)
T ss_dssp ------SCEEEEETTCSSEEEEEC--CCSSCC--CEEEECTTSTTEEEEECCTTT----------CEEEEEETTTCCEE
T ss_pred ------CeEEEccCCCCCccEEec--CCcceE--EEEEECCCCCCEEEEecCCCC----------CEEEEEECCCCCEE
Confidence 234556776654332221 111111 12333 34567777753222 45889998776543
No 141
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.27 E-value=1.1 Score=49.19 Aligned_cols=96 Identities=10% Similarity=0.053 Sum_probs=55.3
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEE-CC--cEEEEEecCCCCcCCCcEEEEECCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GN--RKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~-~~--~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
+++.++.||.++ .+.+||..+.++..+.. +......-.++.+ .+ +..++.|+.++. +..||+.+
T Consensus 20 dg~~latg~~dg-----~I~vwd~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~-----I~vwd~~~ 86 (753)
T 3jro_A 20 YGKRLATCSSDK-----TIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYDGK-----VLIWKEEN 86 (753)
T ss_dssp SSCCEEEEETTT-----EEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETTSC-----EEEEEEET
T ss_pred CCCeEEEEECCC-----cEEEEecCCCCCcccee---ccCCcCceEEEEecCCCCCCEEEEEeCCCe-----EEEEECCC
Confidence 456666776553 58888888777776653 2222222222333 33 577788877654 88899999
Q ss_pred CcEEEeccCCCCCCcccCeeEEEe--C--CEEEEEcccC
Q 010034 163 LEWMQLPVTGSVPPPRCGHTATMV--E--KRLLIYGGRG 197 (519)
Q Consensus 163 ~~W~~l~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~ 197 (519)
++|..+. ...........+.+ + +.+++.|+.+
T Consensus 87 ~~~~~~~---~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 87 GRWSQIA---VHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp TEEEEEE---EECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred Ccccccc---cccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 9887765 22222222222222 3 5677777654
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.23 E-value=3.5 Score=39.27 Aligned_cols=115 Identities=11% Similarity=0.147 Sum_probs=59.1
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CC-eEEEEccccCCcCCCcEEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~dv~~yd 108 (519)
+.+|+.++.+ +.++++|+.+++....-.. +....-+.++.. ++ .+|+.+... ..++++|
T Consensus 11 ~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d 71 (349)
T 1jmx_B 11 HEYMIVTNYP-----NNLHVVDVASDTVYKSCVM---------PDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGID 71 (349)
T ss_dssp CEEEEEEETT-----TEEEEEETTTTEEEEEEEC---------SSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEE
T ss_pred CEEEEEeCCC-----CeEEEEECCCCcEEEEEec---------CCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEe
Confidence 5677776642 5689999998865433211 110012333333 34 577775422 4699999
Q ss_pred CCCCeEEEEeeCCCCCC--CCCccEEEEECCc-EEEEEecC---CCCc---CCCcEEEEECCCCc
Q 010034 109 TDIWQWSELTSFGDLPS--PRDFAAASAIGNR-KIVMYGGW---DGKK---WLSDVYVLDTISLE 164 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~--~r~~~~~~~~~~~-~iyv~GG~---~~~~---~~~~v~~yd~~t~~ 164 (519)
+.+++-......+..|. ...-+.++...++ .+|+.+.. .... ..+.+++||+.+++
T Consensus 72 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 72 LDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp TTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred CCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 99887654332111110 1112344444444 45554421 0000 12568999988743
No 143
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.17 E-value=7.9 Score=36.52 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=64.1
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
.++.+++.|+.+ ..+..++............ ...........-.+..++.|+.++ .+.++|
T Consensus 96 ~dg~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d 156 (340)
T 4aow_A 96 SDGQFALSGSWD-----GTLRLWDLTTGTTTRRFVG---------HTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWN 156 (340)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEEEEEC---------CSSCEEEEEECTTSSCEEEEETTS-----CEEEEC
T ss_pred CCCCEEEEEccc-----ccceEEeecccceeeeecC---------CCCceeEEEEeecCccceeecCCC-----eEEEEE
Confidence 344556666543 2466677766654443321 111112222222455666666543 366777
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEE---CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEE
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAI---GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~ 185 (519)
.....-..... ......-..+.+ ....+++.||.++ .+..||..+.+....- ..... .-.+++.
T Consensus 157 ~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~~~~~~~---~~h~~-~v~~~~~ 223 (340)
T 4aow_A 157 TLGVCKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANCKLKTNH---IGHTG-YLNTVTV 223 (340)
T ss_dssp TTSCEEEEECS----SSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTTEEEEEE---CCCSS-CEEEEEE
T ss_pred eCCCceEEEEe----ccccCcccceEEccCCCCcEEEEEcCCC-----EEEEEECCCCceeeEe---cCCCC-cEEEEEE
Confidence 76654333321 111111122222 2335666676554 3788998887655432 11111 1112222
Q ss_pred e-CCEEEEEcccC
Q 010034 186 V-EKRLLIYGGRG 197 (519)
Q Consensus 186 ~-~~~lyv~GG~~ 197 (519)
. ++++++.|+.+
T Consensus 224 s~~~~~l~s~s~D 236 (340)
T 4aow_A 224 SPDGSLCASGGKD 236 (340)
T ss_dssp CTTSSEEEEEETT
T ss_pred CCCCCEEEEEeCC
Confidence 2 56677777653
No 144
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.16 E-value=1 Score=44.01 Aligned_cols=70 Identities=11% Similarity=0.164 Sum_probs=38.4
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCC-ccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
++++++.|+.++ .+.+||+.++.|..+.. +..... -.+++...++.+++.|+.++ .+..||+.+..
T Consensus 22 ~g~~l~~~~~d~-----~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTTTATN-----QVELYEQDGNGWKHART---FSDHDKIVTCVDWAPKSNRIVTCSQDR-----NAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECCCSSS-----CBCEEEEETTEEEECCC---BCCCSSCEEEEEECTTTCCEEEEETTS-----SEEEC------
T ss_pred CCCEEEEecCCC-----EEEEEEccCCceEEEEE---EecCCceEEEEEEeCCCCEEEEEeCCC-----eEEEEEcCCCC
Confidence 566677776543 47788888888877653 322222 22333335567777887654 38888888776
Q ss_pred -EEEe
Q 010034 165 -WMQL 168 (519)
Q Consensus 165 -W~~l 168 (519)
|...
T Consensus 89 ~~~~~ 93 (377)
T 3dwl_C 89 TWKQT 93 (377)
T ss_dssp CCCCE
T ss_pred ceeee
Confidence 4433
No 145
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.16 E-value=7.4 Score=36.13 Aligned_cols=182 Identities=4% Similarity=-0.029 Sum_probs=92.9
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCC-CccEEEEE-CCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPR-DFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r-~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
++++|+.+..+ ..+.+||+.......+...+..+... .-.++++. .++.+|+.+... ...+.+||....
T Consensus 40 ~g~l~v~~~~~-----~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTNN-----HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGGG-----TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEECTTSC
T ss_pred CCCEEEEECCC-----CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCCc
Confidence 46788875433 35889998865544443211111111 12333442 567899886321 245889995544
Q ss_pred cEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE
Q 010034 164 EWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS 242 (519)
Q Consensus 164 ~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~ 242 (519)
.-..+.. +....-+.++.. ++++|+..... +.+..||+.......+...+... .-.++++
T Consensus 111 ~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~------------~~i~~~~~~g~~~~~~~~~~~~~---~p~~i~~ 171 (286)
T 1q7f_A 111 FVRKFGA----TILQHPRGVTVDNKGRIIVVECKV------------MRVIIFDQNGNVLHKFGCSKHLE---FPNGVVV 171 (286)
T ss_dssp EEEEECT----TTCSCEEEEEECTTSCEEEEETTT------------TEEEEECTTSCEEEEEECTTTCS---SEEEEEE
T ss_pred EEEEecC----ccCCCceEEEEeCCCCEEEEECCC------------CEEEEEcCCCCEEEEeCCCCccC---CcEEEEE
Confidence 4333421 111111333333 56788875321 34566787665555544211111 1223443
Q ss_pred -eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccC
Q 010034 243 -GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGF 310 (519)
Q Consensus 243 -~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~ 310 (519)
.++.+|+.... .+.+.+||+.......+...+. ...-.+++.- ++.+|+....
T Consensus 172 ~~~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g~---~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 172 NDKQEIFISDNR------------AHCVKVFNYEGQYLRQIGGEGI---TNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp CSSSEEEEEEGG------------GTEEEEEETTCCEEEEESCTTT---SCSEEEEEECTTCCEEEEECS
T ss_pred CCCCCEEEEECC------------CCEEEEEcCCCCEEEEEccCCc---cCCCcEEEECCCCCEEEEeCC
Confidence 45788886542 3568999987765555543211 1122333332 5678887643
No 146
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.05 E-value=6.6 Score=38.25 Aligned_cols=109 Identities=15% Similarity=0.168 Sum_probs=55.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++..++.|+.+ ..+.++|+.+++-...- . ..........+.- +..+++.|+.++ .+.++
T Consensus 137 pdg~~l~sgs~d-----~~i~iwd~~~~~~~~~~-~--------~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iw 197 (344)
T 4gqb_B 137 SSGTQAVSGSKD-----ICIKVWDLAQQVVLSSY-R--------AHAAQVTCVAASPHKDSVFLSCSEDN-----RILLW 197 (344)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTTEEEEEE-C--------CCSSCEEEEEECSSCTTEEEEEETTS-----CEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEE-c--------CcCCceEEEEecCCCCCceeeecccc-----ccccc
Confidence 345566666643 34788898876532211 1 1111122222222 335777777654 48889
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
|+.+.+-...- ..+.......++.. .++.+++.|+.++ .+..||+.+.+
T Consensus 198 d~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~~ 248 (344)
T 4gqb_B 198 DTRCPKPASQI---GCSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKSTS 248 (344)
T ss_dssp ETTSSSCEEEC---C----CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC--
T ss_pred cccccceeeee---ecceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCCc
Confidence 99877543321 01111111122222 3456888887654 37888987654
No 147
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.96 E-value=3.2 Score=39.70 Aligned_cols=156 Identities=10% Similarity=0.018 Sum_probs=83.3
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
+++||+.+... ..+++||+.+++...+.. . ....-++++...++++|+.+..+. .....+++||+.+.+.
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~---~-~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFV---S-HKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNL 124 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEE---C-SSSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSC
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEee---C-CCCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEE
Confidence 56788876533 358999999998877652 1 112233444445678888754321 1224699999998876
Q ss_pred EEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-e
Q 010034 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~ 243 (519)
..+.. .......-..++.. ++++|+......... .-..++++|+.+.+...+.. ... ...+.+. .
T Consensus 125 ~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~------~~~~l~~~~~~~~~~~~~~~--~~~---~~~~i~~~~ 191 (333)
T 2dg1_A 125 QDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTN------PLGGVYYVSPDFRTVTPIIQ--NIS---VANGIALST 191 (333)
T ss_dssp EEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTB------CCEEEEEECTTSCCEEEEEE--EES---SEEEEEECT
T ss_pred EEEEc--cCccCCcccceEECCCCCEEEEeccccccC------CCceEEEEeCCCCEEEEeec--CCC---cccceEECC
Confidence 64421 11111111222333 567887543211100 01346667887777665531 111 1123333 2
Q ss_pred CC-EEEEEeccCCCCCcccccceeCcEEEEEcCC
Q 010034 244 GH-YLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (519)
Q Consensus 244 ~~-~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t 276 (519)
++ .+|+... ..+.+++||+.+
T Consensus 192 dg~~l~v~~~------------~~~~i~~~d~~~ 213 (333)
T 2dg1_A 192 DEKVLWVTET------------TANRLHRIALED 213 (333)
T ss_dssp TSSEEEEEEG------------GGTEEEEEEECT
T ss_pred CCCEEEEEeC------------CCCeEEEEEecC
Confidence 33 5777542 125689999853
No 148
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.89 E-value=8.6 Score=36.30 Aligned_cols=107 Identities=8% Similarity=-0.079 Sum_probs=58.7
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
.++.+++.|+.+ ..+.++|..+..-...-. ............-+++.++.|+.++ .+.++|
T Consensus 23 p~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~s~d~-----~i~vwd 83 (304)
T 2ynn_A 23 PTEPWVLTTLYS-----GRVELWNYETQVEVRSIQ---------VTETPVRAGKFIARKNWIIVGSDDF-----RIRVFN 83 (304)
T ss_dssp SSSSEEEEEETT-----SEEEEEETTTTEEEEEEE---------CCSSCEEEEEEEGGGTEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEcCC-----CcEEEEECCCCceeEEee---------ccCCcEEEEEEeCCCCEEEEECCCC-----EEEEEE
Confidence 445677777754 457888988775432211 1111122223333566777777553 588899
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
..+++-...-. .+. ..-.+++...++.+++.|+.++. +..+|+.++
T Consensus 84 ~~~~~~~~~~~---~h~-~~v~~~~~~~~~~~l~sgs~D~~-----v~lWd~~~~ 129 (304)
T 2ynn_A 84 YNTGEKVVDFE---AHP-DYIRSIAVHPTKPYVLSGSDDLT-----VKLWNWENN 129 (304)
T ss_dssp TTTCCEEEEEE---CCS-SCEEEEEECSSSSEEEEEETTSC-----EEEEEGGGT
T ss_pred CCCCcEEEEEe---CCC-CcEEEEEEcCCCCEEEEECCCCe-----EEEEECCCC
Confidence 98875432211 111 11223334455567778877654 778887765
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=91.70 E-value=8.9 Score=36.14 Aligned_cols=100 Identities=9% Similarity=0.007 Sum_probs=49.9
Q ss_pred CcEEEEEcC--CCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CC-eEEEEccccCCcCCCcEEEEECCCC-eEEEEeeC
Q 010034 46 SDVVVYDID--NKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSF 120 (519)
Q Consensus 46 ~~~~~yd~~--~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~dv~~yd~~t~-~W~~~~~~ 120 (519)
..+.+|++. ++++..+..... +. .. ..++.. ++ .+|+.+... ..+.+||+..+ ....+..
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~-------~~-~~-~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~- 124 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESAL-------PG-SL-THISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDV- 124 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEC-------SS-CC-SEEEECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEE-
T ss_pred CeEEEEEecCCCCceeecccccc-------CC-CC-cEEEEcCCCCEEEEEecCC-----CeEEEEECCCCcccccccc-
Confidence 467777776 778776643311 11 11 233332 44 455554322 34788887433 2233322
Q ss_pred CCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCC-CcEEE
Q 010034 121 GDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTIS-LEWMQ 167 (519)
Q Consensus 121 g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t-~~W~~ 167 (519)
.+....-++++...++ .+|+.+..+ ..+.+||+.+ .+...
T Consensus 125 --~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 125 --VEGLDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVA 166 (343)
T ss_dssp --ECCCTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEE
T ss_pred --ccCCCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCCceee
Confidence 1122223344444444 677665222 3488999887 66653
No 150
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.67 E-value=8.3 Score=35.78 Aligned_cols=148 Identities=9% Similarity=0.037 Sum_probs=73.1
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++..++.|+.++ .+.+||... -.... ..+....-.+++...++. ++.|+.++ .+..||+.+.+-
T Consensus 154 ~~~~l~~~~~d~-----~i~i~d~~~--~~~~~---~~~~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~~ 217 (313)
T 3odt_A 154 SENKFLTASADK-----TIKLWQNDK--VIKTF---SGIHNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGDV 217 (313)
T ss_dssp TTTEEEEEETTS-----CEEEEETTE--EEEEE---CSSCSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCCE
T ss_pred CCCEEEEEECCC-----CEEEEecCc--eEEEE---eccCcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchhh
Confidence 566777777553 477888332 22221 121222233444445557 66676554 488999887654
Q ss_pred EEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeC
Q 010034 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGG 244 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~ 244 (519)
...- .... ..-.++... +++ ++.|+.+ ..+..||..+.+....- ..+.......+...+
T Consensus 218 ~~~~---~~~~-~~i~~~~~~~~~~-l~~~~~d------------g~v~iwd~~~~~~~~~~---~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 218 LRTY---EGHE-SFVYCIKLLPNGD-IVSCGED------------RTVRIWSKENGSLKQVI---TLPAISIWSVDCMSN 277 (313)
T ss_dssp EEEE---ECCS-SCEEEEEECTTSC-EEEEETT------------SEEEEECTTTCCEEEEE---ECSSSCEEEEEECTT
T ss_pred hhhh---hcCC-ceEEEEEEecCCC-EEEEecC------------CEEEEEECCCCceeEEE---eccCceEEEEEEccC
Confidence 3322 1011 111223333 443 5555532 34566787777654443 122222222222345
Q ss_pred CEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEc
Q 010034 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (519)
Q Consensus 245 ~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v 282 (519)
++ ++.|+.+ +.+.+||+.+..+...
T Consensus 278 ~~-~~~~~~d------------g~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 278 GD-IIVGSSD------------NLVRIFSQEKSRWASE 302 (313)
T ss_dssp SC-EEEEETT------------SCEEEEESCGGGCCC-
T ss_pred CC-EEEEeCC------------CcEEEEeCCCCceeeh
Confidence 55 4455533 4588999888776543
No 151
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.58 E-value=9.6 Score=36.23 Aligned_cols=105 Identities=15% Similarity=0.075 Sum_probs=55.1
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEEEC
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
+.+++.|+.+ ..+.+||+.+.......... ..... -.+++.. +++.++.|+.++ .+.++|.
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~-------~h~~~-v~~~~~~~~~~~l~s~~~dg-----~v~iwd~ 115 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQ-------MHTGP-VLDVCWSDDGSKVFTASCDK-----TAKMWDL 115 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEE-------ECSSC-EEEEEECTTSSEEEEEETTS-----EEEEEET
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEec-------cccCC-EEEEEECcCCCEEEEEcCCC-----cEEEEEc
Confidence 3777777754 35788898874333211110 01111 2223332 566666776553 5889999
Q ss_pred CCCeEEEEeeCCCCCCCCCccEEEE--ECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 110 DIWQWSELTSFGDLPSPRDFAAASA--IGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 110 ~t~~W~~~~~~g~~P~~r~~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
.+.+...... .. ..-.+++. ..++.+++.|+.++. +..||+.+.
T Consensus 116 ~~~~~~~~~~---~~--~~v~~~~~~~~~~~~~l~~~~~dg~-----i~vwd~~~~ 161 (368)
T 3mmy_A 116 SSNQAIQIAQ---HD--APVKTIHWIKAPNYSCVMTGSWDKT-----LKFWDTRSS 161 (368)
T ss_dssp TTTEEEEEEE---CS--SCEEEEEEEECSSCEEEEEEETTSE-----EEEECSSCS
T ss_pred CCCCceeecc---cc--CceEEEEEEeCCCCCEEEEccCCCc-----EEEEECCCC
Confidence 9988666542 11 11223333 345577777775532 555555443
No 152
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.48 E-value=14 Score=39.87 Aligned_cols=125 Identities=14% Similarity=0.141 Sum_probs=67.7
Q ss_pred EEEeCCeEEEEccccCCcCCCcEEEEECCCCe--EEEEeeCCC--CC--C-CCCccEEEEECCcEEEEEecCCCCcCCCc
Q 010034 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFGD--LP--S-PRDFAAASAIGNRKIVMYGGWDGKKWLSD 154 (519)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~--W~~~~~~g~--~P--~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~ 154 (519)
-++.++.||+.... +.++.+|..|++ |+.-..... .+ . .....+.++ .+++||+... -..
T Consensus 73 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~------dg~ 139 (677)
T 1kb0_A 73 PVVVDGIMYVSASW------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAW------DGR 139 (677)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECT------TSE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcC------CCE
Confidence 35678999988652 459999998874 876442110 00 0 011122333 3558887642 245
Q ss_pred EEEEECCCCc--EEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCc--eEEec
Q 010034 155 VYVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLK 226 (519)
Q Consensus 155 v~~yd~~t~~--W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~--W~~i~ 226 (519)
++.+|..|++ |+.-.............+.++.++.+|+..+....+ .-..+..||..+++ |+.-.
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~-------~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG-------VRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC-------CBCEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccC-------CCCEEEEEECCCCcEEEEecc
Confidence 9999998775 876531001111112223345688887754322111 01346677887765 77654
No 153
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.42 E-value=12 Score=36.85 Aligned_cols=156 Identities=11% Similarity=-0.017 Sum_probs=77.7
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEE-----EeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSE-----LTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLD 159 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~-----~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd 159 (519)
++.+++.|+.++ .+.+||..++.... +... ..+ ...-.+++...++ .+++.|+.++ .+..||
T Consensus 93 ~~~~l~s~s~dg-----~v~vw~~~~~~~~~~~~~~~~~~-~~h-~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSEDC-----TVMVWEIPDGGLVLPLREPVITL-EGH-TKRVGIVAWHPTAQNVLLSAGCDN-----VILVWD 160 (402)
T ss_dssp CTTEEEEEETTS-----EEEEEECCTTCCSSCBCSCSEEE-ECC-SSCEEEEEECSSBTTEEEEEETTS-----CEEEEE
T ss_pred CCCEEEEEeCCC-----eEEEEEccCCCCccccCCceEEe-cCC-CCeEEEEEECcCCCCEEEEEcCCC-----EEEEEE
Confidence 567888887553 48889988764311 1100 011 1111223333443 5777777654 388999
Q ss_pred CCCCcEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCccee
Q 010034 160 TISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH 238 (519)
Q Consensus 160 ~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~ 238 (519)
+.+.+....-.. ......-.++... ++.+++.|+.+ ..+..||+.+.+-...-.. .....+...
T Consensus 161 ~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~-~~~~~~~~~ 225 (402)
T 2aq5_A 161 VGTGAAVLTLGP--DVHPDTIYSVDWSRDGALICTSCRD------------KRVRVIEPRKGTVVAEKDR-PHEGTRPVH 225 (402)
T ss_dssp TTTTEEEEEECT--TTCCSCEEEEEECTTSSCEEEEETT------------SEEEEEETTTTEEEEEEEC-SSCSSSCCE
T ss_pred CCCCCccEEEec--CCCCCceEEEEECCCCCEEEEEecC------------CcEEEEeCCCCceeeeecc-CCCCCcceE
Confidence 998875543200 1111111223333 55666666643 3355678777654432201 111111222
Q ss_pred EEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCC
Q 010034 239 TITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (519)
Q Consensus 239 s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~ 277 (519)
.+...++.+++.|.... ....+.+||+.+.
T Consensus 226 ~~~~~~~~~l~~g~~~~---------~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 226 AVFVSEGKILTTGFSRM---------SERQVALWDTKHL 255 (402)
T ss_dssp EEECSTTEEEEEEECTT---------CCEEEEEEETTBC
T ss_pred EEEcCCCcEEEEeccCC---------CCceEEEEcCccc
Confidence 23335677777763211 1246888998764
No 154
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.37 E-value=13 Score=42.90 Aligned_cols=112 Identities=10% Similarity=-0.026 Sum_probs=61.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
.++..++.||.+ +.+.+||..+.+-...- . .........+..-+++.++.|+.++ .+.++|
T Consensus 625 ~~~~~l~s~~~d-----~~i~vw~~~~~~~~~~~-~--------~h~~~v~~~~~s~~~~~l~s~~~d~-----~v~vwd 685 (1249)
T 3sfz_A 625 QDGQRIASCGAD-----KTLQVFKAETGEKLLDI-K--------AHEDEVLCCAFSSDDSYIATCSADK-----KVKIWD 685 (1249)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTCCEEEEE-C--------CCSSCEEEEEECTTSSEEEEEETTS-----EEEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCCEEEEe-c--------cCCCCEEEEEEecCCCEEEEEeCCC-----eEEEEE
Confidence 456677777643 35889999887643321 1 1111122222222566777777543 589999
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEEEC--CcEEEEEecCCCCcCCCcEEEEECCCCcEEEe
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l 168 (519)
..+++....-. .+.. .-.+++... ++.+++.|+.++ .+..||+.+.+-...
T Consensus 686 ~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~~ 738 (1249)
T 3sfz_A 686 SATGKLVHTYD---EHSE-QVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRNT 738 (1249)
T ss_dssp TTTCCEEEEEE---CCSS-CEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEEE
T ss_pred CCCCceEEEEc---CCCC-cEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhhe
Confidence 99886544331 1111 112222222 435666676554 388899988875543
No 155
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.17 E-value=13 Score=37.16 Aligned_cols=67 Identities=7% Similarity=-0.058 Sum_probs=38.8
Q ss_pred CeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 87 ~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
+++++.|+.+ ..+.+||+.+........ ...... -.+++.. ++.+++.|+.++ .+..||+.+.+..
T Consensus 210 ~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~--~~h~~~-v~~~~~s-d~~~l~s~~~d~-----~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRD-----EHIKISHYPQCFIVDKWL--FGHKHF-VSSICCG-KDYLLLSAGGDD-----KIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETT-----SCEEEEEESCTTCEEEEC--CCCSSC-EEEEEEC-STTEEEEEESSS-----EEEEEETTTCCEE
T ss_pred CcEEEEEcCC-----CcEEEEECCCCceeeeee--cCCCCc-eEEEEEC-CCCEEEEEeCCC-----eEEEEECCCCcEe
Confidence 6677777755 358889988765433211 011111 1223333 556777777543 4888999887754
Q ss_pred E
Q 010034 167 Q 167 (519)
Q Consensus 167 ~ 167 (519)
.
T Consensus 276 ~ 276 (450)
T 2vdu_B 276 S 276 (450)
T ss_dssp E
T ss_pred e
Confidence 4
No 156
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.16 E-value=7.1 Score=36.87 Aligned_cols=176 Identities=10% Similarity=-0.025 Sum_probs=85.6
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCC-------cCCCcEEEEECCCCeEEEEe
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS-------RRLGDFWVLDTDIWQWSELT 118 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~-------~~~~dv~~yd~~t~~W~~~~ 118 (519)
+.+++||+.+++++.+..... ..+..|....++.-++++|+-. .... .....++++|+.. +...+.
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~-----~~~~~~~~di~~d~dG~l~~~~-~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~ 145 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDN-----DKKNNRFNDGKVDPAGRYFAGT-MAEETAPAVLERHQGALYSLFPDH-HVKKYF 145 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCT-----TCSSEEEEEEEECTTSCEEEEE-EECCSBTTBCCTTCEEEEEECTTS-CEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCC-----CCCCCCCCCEEECCCCCEEEec-CCcccccccccCCCcEEEEEECCC-CEEEEe
Confidence 468999999998887754311 1122233333333357777642 2111 1234688898863 333333
Q ss_pred eCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEEC--CCCcEEEeccCCCCCC-cccCeeEEEe-CCEEEEE
Q 010034 119 SFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDT--ISLEWMQLPVTGSVPP-PRCGHTATMV-EKRLLIY 193 (519)
Q Consensus 119 ~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~--~t~~W~~l~~~~~~p~-~r~~~~~~~~-~~~lyv~ 193 (519)
. .+.. -...+...++ .+|+.... .+.+++||. .+.+......-...+. ...-..++.. +++||+.
T Consensus 146 ~--~~~~---pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 146 D--QVDI---SNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp E--EESB---EEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE
T ss_pred e--cccc---ccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 2 1111 1234443343 68877542 245888875 5555432110001111 1111233333 5788886
Q ss_pred cccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEe---CCEEEEEeccC
Q 010034 194 GGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG---GHYLLLFGGHG 254 (519)
Q Consensus 194 GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~---~~~iyv~GG~~ 254 (519)
.... ..+.+||+++++....- ..|..+.. +++.. ++.+||.....
T Consensus 216 ~~~~------------~~v~~~d~~tG~~~~~i---~~p~~~~t-~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 216 CYNG------------GRVIRLDPVTGKRLQTV---KLPVDKTT-SCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EETT------------TEEEEECTTTCCEEEEE---ECSSSBEE-EEEEESGGGCEEEEEEBCT
T ss_pred EcCC------------CEEEEEcCCCceEEEEE---ECCCCCce-EEEEeCCCCCEEEEEcCCc
Confidence 4211 34677899877654432 23433322 23332 35788876543
No 157
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.10 E-value=8.6 Score=36.35 Aligned_cols=133 Identities=8% Similarity=-0.049 Sum_probs=69.6
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
.+.+|+.++.. +.+.++|+.+++...... .+. ....++.-.++ .+|+.+..+ ..++.+|+.+.+
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~---~~~--~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQIT---LGY--DFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEE---CCC--CEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSS
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEE---ccC--CcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCc
Confidence 45778876644 368999999998866543 221 11233443444 577776533 369999999887
Q ss_pred E-EEeccCCCCCCcccCeeEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEE
Q 010034 165 W-MQLPVTGSVPPPRCGHTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (519)
Q Consensus 165 W-~~l~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~ 241 (519)
- ..... ....++ ++++.. + +.+| .+...... ..+..+|+.+++....-..+. ..+.++
T Consensus 74 ~~~~~~~--~~~~~~--~~~~~s~dg~~l~-~~~~~~~~---------~~i~v~d~~~~~~~~~~~~~~-----~~~~~~ 134 (331)
T 3u4y_A 74 PKVVAIQ--EGQSSM--ADVDITPDDQFAV-TVTGLNHP---------FNMQSYSFLKNKFISTIPIPY-----DAVGIA 134 (331)
T ss_dssp CEEEEEE--ECSSCC--CCEEECTTSSEEE-ECCCSSSS---------CEEEEEETTTTEEEEEEECCT-----TEEEEE
T ss_pred eeEEecc--cCCCCc--cceEECCCCCEEE-EecCCCCc---------ccEEEEECCCCCeEEEEECCC-----CccceE
Confidence 4 22221 111222 213333 3 3566 33221110 256677888877655431111 123444
Q ss_pred E-eCC-EEEEEec
Q 010034 242 S-GGH-YLLLFGG 252 (519)
Q Consensus 242 ~-~~~-~iyv~GG 252 (519)
. -++ .+|+.+.
T Consensus 135 ~spdg~~l~~~~~ 147 (331)
T 3u4y_A 135 ISPNGNGLILIDR 147 (331)
T ss_dssp ECTTSSCEEEEEE
T ss_pred ECCCCCEEEEEec
Confidence 4 333 5777654
No 158
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=90.99 E-value=10 Score=41.21 Aligned_cols=207 Identities=13% Similarity=0.087 Sum_probs=102.0
Q ss_pred ccCCcEEEEEcC---CCcEEeeeecCCCCCCCCCCCC--cceeEEEE-eCCeEEEEccccCCcCCCcEEEEECCCCeEEE
Q 010034 43 RFLSDVVVYDID---NKLWFQPECTGNGSNGQVGPGP--RAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSE 116 (519)
Q Consensus 43 ~~~~~~~~yd~~---~~~W~~l~~~~~~~~~~~~p~~--R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~ 116 (519)
.....+|+.+.. ...|..+-.... .... ........ -+++..+++...++.....++++|+.+++...
T Consensus 130 ~~~~~l~~~~~~~~~~~~~~~lld~~~------l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 130 MNQSQLLVRPADAPVGTKGRVLLDPNT------WAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA 203 (741)
T ss_dssp CSSCEEEEEETTSCTTCCCEEEECGGG------CC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE
T ss_pred CeEEEEEEEcCCccCCCCCEEEECHHH------hccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC
Confidence 335778999887 677877632110 0110 01112222 25666666554433333469999999998865
Q ss_pred EeeCCCCCCCCCccEEEEECCcEEEEEecCCCC---------cCCCcEEEEECCCCcE--EEeccCCCCCCcccCeeEEE
Q 010034 117 LTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGK---------KWLSDVYVLDTISLEW--MQLPVTGSVPPPRCGHTATM 185 (519)
Q Consensus 117 ~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~---------~~~~~v~~yd~~t~~W--~~l~~~~~~p~~r~~~~~~~ 185 (519)
... +... ....+...++.||+. ..+.. .....++++++.+..- ..+. . ....+........
T Consensus 204 ~~~----~~~~-~~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~-~-~~~~~~~~~~~~~ 275 (741)
T 1yr2_A 204 DEL----KWVK-FSGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF-A-TPELPKRGHGASV 275 (741)
T ss_dssp EEE----EEEE-SCCCEESTTSEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEE-C-CTTCTTCEEEEEE
T ss_pred ccC----CCce-eccEEEECCCEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEe-c-cCCCCeEEEEEEE
Confidence 431 1111 112223334344443 33221 1245688999877652 2222 1 1111222222222
Q ss_pred e-CCE-EEEEcccCCCCCcccccccccccccccCCCC--c-eEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcc
Q 010034 186 V-EKR-LLIYGGRGGGGPIMGDLWALKGLIEEENETP--G-WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLS 260 (519)
Q Consensus 186 ~-~~~-lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~--~-W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~ 260 (519)
- +++ |++....... .. +.++.+|..+. . |..+.. ....... .+...++.||+......
T Consensus 276 SpDG~~l~~~~~~~~~--~~------~~l~~~d~~~~~~~~~~~l~~---~~~~~~~-~~~~dg~~l~~~s~~~~----- 338 (741)
T 1yr2_A 276 SSDGRWVVITSSEGTD--PV------NTVHVARVTNGKIGPVTALIP---DLKAQWD-FVDGVGDQLWFVSGDGA----- 338 (741)
T ss_dssp CTTSCEEEEEEECTTC--SC------CEEEEEEEETTEECCCEEEEC---SSSSCEE-EEEEETTEEEEEECTTC-----
T ss_pred CCCCCEEEEEEEccCC--Cc------ceEEEEECCCCCCcccEEecC---CCCceEE-EEeccCCEEEEEECCCC-----
Confidence 2 454 4444432211 11 34455577766 6 888762 1112222 22346677877764322
Q ss_pred cccceeCcEEEEEcCC--CeEEEccc
Q 010034 261 RYDIYYNDTIILDRLS--AQWKRLPI 284 (519)
Q Consensus 261 ~~~~~~~~v~~yd~~t--~~W~~v~~ 284 (519)
....++++|+.+ ..|+.+-.
T Consensus 339 ----~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 339 ----PLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp ----TTCEEEEEECSSSSCEEEEEEC
T ss_pred ----CCCEEEEEeCCCCccccEEEec
Confidence 236799999987 57988764
No 159
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=90.99 E-value=11 Score=36.05 Aligned_cols=113 Identities=12% Similarity=0.024 Sum_probs=63.1
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECC
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~ 110 (519)
+.+|+.+... ..+++||+.++....... +. .....+..-++++++... +.+++||+.
T Consensus 61 ~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~----------~~-~v~~i~~~~dg~l~v~~~-------~gl~~~d~~ 117 (326)
T 2ghs_A 61 GTAWWFNILE-----RELHELHLASGRKTVHAL----------PF-MGSALAKISDSKQLIASD-------DGLFLRDTA 117 (326)
T ss_dssp TEEEEEEGGG-----TEEEEEETTTTEEEEEEC----------SS-CEEEEEEEETTEEEEEET-------TEEEEEETT
T ss_pred CEEEEEECCC-----CEEEEEECCCCcEEEEEC----------CC-cceEEEEeCCCeEEEEEC-------CCEEEEECC
Confidence 5677766432 468999998877655431 11 122222234678777531 249999999
Q ss_pred CCeEEEEeeCCC-CCCCCCccEEEEECCcEEEEEec-CCCCcCCCcEEEEECCCCcEEEec
Q 010034 111 IWQWSELTSFGD-LPSPRDFAAASAIGNRKIVMYGG-WDGKKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 111 t~~W~~~~~~g~-~P~~r~~~~~~~~~~~~iyv~GG-~~~~~~~~~v~~yd~~t~~W~~l~ 169 (519)
+++...+..... .+..+ -...+...++++|+... .........++++| +.+...+.
T Consensus 118 ~g~~~~~~~~~~~~~~~~-~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~ 175 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNR-SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF 175 (326)
T ss_dssp TCCEEEEECSSTTCTTEE-EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE
T ss_pred CCcEEEEeeCCCCCCCCC-CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee
Confidence 999887753111 11112 22344445667876431 11112345799999 56666553
No 160
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.97 E-value=6.1 Score=38.72 Aligned_cols=112 Identities=12% Similarity=0.079 Sum_probs=55.0
Q ss_pred EEEEcCcCCC-----ccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEE
Q 010034 33 VVVFGGLVDK-----RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 33 lyv~GG~~~~-----~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~ 106 (519)
+++.|...+. ..-..+.+||+.+..-..... .......-.+++. -++++++.|+.++ .+.+
T Consensus 27 ~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~v~v 93 (416)
T 2pm9_A 27 LLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIA--------SLQVDSKFNDLDWSHNNKIIAGALDNG-----SLEL 93 (416)
T ss_dssp EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSC--------CCCCSSCEEEEEECSSSSCEEEEESSS-----CEEE
T ss_pred EEEEEecCcccccccCCCCeEEEEEccCCCCCcEEE--------EEecCCceEEEEECCCCCeEEEEccCC-----eEEE
Confidence 6666744321 223468889988754221110 0111111223333 2556667776543 4788
Q ss_pred EECCCC--eEEEEeeCCCCCCCCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 107 LDTDIW--QWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 107 yd~~t~--~W~~~~~~g~~P~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
||..+. ....+... ..+. ..-.+++...+ +.+++.|+.++. +..||+.+.+
T Consensus 94 w~~~~~~~~~~~~~~~-~~h~-~~v~~~~~~~~~~~~l~s~~~dg~-----v~iwd~~~~~ 147 (416)
T 2pm9_A 94 YSTNEANNAINSMARF-SNHS-SSVKTVKFNAKQDNVLASGGNNGE-----IFIWDMNKCT 147 (416)
T ss_dssp ECCSSTTSCCCEEEEC-CCSS-SCCCEEEECSSSTTBEEEECSSSC-----EEBCBTTTTS
T ss_pred eecccccccccchhhc-cCCc-cceEEEEEcCCCCCEEEEEcCCCe-----EEEEECCCCc
Confidence 888761 11122210 0111 11233334333 567777776543 7888887764
No 161
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.90 E-value=12 Score=36.22 Aligned_cols=144 Identities=10% Similarity=-0.022 Sum_probs=77.1
Q ss_pred eEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC-CCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 88 HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL-PSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 88 ~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~-P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++++.|+.++ .+.+||..+.+...... . .....-.+++... ++.+++.|+.++ .+..+|+.+...
T Consensus 87 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKGG-----DIILWDYDVQNKTSFIQ---GMGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBTS-----CEEEEETTSTTCEEEEC---CCSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTSCEE
T ss_pred CEEEEEcCCC-----eEEEEeCCCcccceeee---cCCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCCCce
Confidence 6777777653 58899999887665542 1 1112223334444 457777777654 488899998777
Q ss_pred EEeccCCCCCCc-ccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-
Q 010034 166 MQLPVTGSVPPP-RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS- 242 (519)
Q Consensus 166 ~~l~~~~~~p~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~- 242 (519)
..+.. .... ..-.++... ++..++.|+.+ ..+..||+.......+. .... .-.++..
T Consensus 154 ~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~---~h~~--~v~~~~~~ 213 (383)
T 3ei3_B 154 QVFAK---TDSWDYWYCCVDVSVSRQMLATGDST------------GRLLLLGLDGHEIFKEK---LHKA--KVTHAEFN 213 (383)
T ss_dssp EEEEC---CCCSSCCEEEEEEETTTTEEEEEETT------------SEEEEEETTSCEEEEEE---CSSS--CEEEEEEC
T ss_pred EEEec---cCCCCCCeEEEEECCCCCEEEEECCC------------CCEEEEECCCCEEEEec---cCCC--cEEEEEEC
Confidence 76652 1111 111222223 55666666643 23445666544444443 1111 1122333
Q ss_pred eCCE-EEEEeccCCCCCcccccceeCcEEEEEcCC
Q 010034 243 GGHY-LLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (519)
Q Consensus 243 ~~~~-iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t 276 (519)
-++. +++.|+.+ ..+.+||+.+
T Consensus 214 ~~~~~~l~s~~~d------------~~i~iwd~~~ 236 (383)
T 3ei3_B 214 PRCDWLMATSSVD------------ATVKLWDLRN 236 (383)
T ss_dssp SSCTTEEEEEETT------------SEEEEEEGGG
T ss_pred CCCCCEEEEEeCC------------CEEEEEeCCC
Confidence 2333 66766643 3578888876
No 162
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=90.86 E-value=13 Score=36.52 Aligned_cols=109 Identities=16% Similarity=0.086 Sum_probs=62.0
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEE
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~ 106 (519)
..++..++.|+.+ ..+.+||+.+.+-...- . .... .-.+++.. ++..++.|+.++ .+.+
T Consensus 132 s~dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~-~--------~h~~-~v~~~~~~p~~~~l~s~s~d~-----~v~i 191 (393)
T 1erj_A 132 SPDGKFLATGAED-----RLIRIWDIENRKIVMIL-Q--------GHEQ-DIYSLDYFPSGDKLVSGSGDR-----TVRI 191 (393)
T ss_dssp CTTSSEEEEEETT-----SCEEEEETTTTEEEEEE-C--------CCSS-CEEEEEECTTSSEEEEEETTS-----EEEE
T ss_pred CCCCCEEEEEcCC-----CeEEEEECCCCcEEEEE-c--------cCCC-CEEEEEEcCCCCEEEEecCCC-----cEEE
Confidence 3456677777754 45888999887643321 1 1111 12233332 456666666543 5888
Q ss_pred EECCCCeEEEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 107 yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
+|+.+++...... ... ...+++... ++.+++.|+.++. +..||+.+.+-.
T Consensus 192 wd~~~~~~~~~~~---~~~--~v~~~~~~~~~~~~l~~~s~d~~-----v~iwd~~~~~~~ 242 (393)
T 1erj_A 192 WDLRTGQCSLTLS---IED--GVTTVAVSPGDGKYIAAGSLDRA-----VRVWDSETGFLV 242 (393)
T ss_dssp EETTTTEEEEEEE---CSS--CEEEEEECSTTCCEEEEEETTSC-----EEEEETTTCCEE
T ss_pred EECCCCeeEEEEE---cCC--CcEEEEEECCCCCEEEEEcCCCc-----EEEEECCCCcEE
Confidence 9999887654331 111 112223322 5678888887653 888998887644
No 163
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.78 E-value=6 Score=37.50 Aligned_cols=167 Identities=11% Similarity=-0.058 Sum_probs=80.4
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEE----ccccC------
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIF----GGRFG------ 97 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~----GG~~~------ 97 (519)
..++++|+.... ...+.+||+. ++.+.+..... ..+..+....++.-++++|+. |-...
T Consensus 94 d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~-----~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 94 DAQQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYA-----GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp CTTSCEEEEETT-----TTEEEEECTT-SCEEEEECEET-----TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CCCCCEEEEECC-----CCEEEEECCC-CCEEEEEeccC-----CCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 344566654321 1357788876 66655532110 011111122233336788885 43211
Q ss_pred --CcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCC
Q 010034 98 --SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSV 174 (519)
Q Consensus 98 --~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~ 174 (519)
......+++||+.+++.+.+. .+.. -...+...++ .+|+..........+.+++||+..+.......-...
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~---~~~~---p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA---DLDH---PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE---EESS---EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred ccccCCCeEEEEcCCCCcEEEEe---cCCC---CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 011356999999888877664 1111 1234444444 577765432111235699999876543221110011
Q ss_pred CCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEec
Q 010034 175 PPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (519)
Q Consensus 175 p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~ 226 (519)
+.... ..++.. +++||+..+ +.+.+||++......+.
T Consensus 237 ~~~~p-dgi~~d~~G~lwv~~~--------------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 237 PDGLP-DGFCVDRGGWLWSSSG--------------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp SSSCC-CSEEECTTSCEEECCS--------------SEEEEECTTSCEEEEEE
T ss_pred CCCCC-CeEEECCCCCEEEecC--------------CcEEEECCCCCEEEEEE
Confidence 11111 123332 567777541 33667898777666665
No 164
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.58 E-value=12 Score=35.44 Aligned_cols=210 Identities=10% Similarity=-0.059 Sum_probs=101.4
Q ss_pred EEEEECCc-EEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCC
Q 010034 24 SAVNIGKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (519)
Q Consensus 24 ~~~~~~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~ 101 (519)
+.+...++ .||+.+-.+ +.+++|++ ++....... +... -+..+.. ++++|+.....
T Consensus 49 gp~~~~~g~~l~~~d~~~-----~~i~~~~~-~g~~~~~~~----------~~~~-~~gl~~d~dG~l~v~~~~~----- 106 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVG-----RRVLGWRE-DGTVDVLLD----------ATAF-TNGNAVDAQQRLVHCEHGR----- 106 (305)
T ss_dssp EEEEEGGGTEEEEEETTT-----TEEEEEET-TSCEEEEEE----------SCSC-EEEEEECTTSCEEEEETTT-----
T ss_pred CCeEeCCCCEEEEEECCC-----CEEEEEeC-CCCEEEEeC----------CCCc-cceeeECCCCCEEEEECCC-----
Confidence 33434333 466665432 45888988 455444432 1111 2333333 56888763211
Q ss_pred CcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEE----ecCCC--------CcCCCcEEEEECCCCcEEEec
Q 010034 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMY----GGWDG--------KKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 102 ~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~t~~W~~l~ 169 (519)
..+.+||+. ++.+.+...........-..+++..++.+|+. |-... ......+++||+.+.+.+.+.
T Consensus 107 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 107 RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 358889986 66666542111101111234555567789885 43210 112357999999888887764
Q ss_pred cCCCCCCcccCeeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCE
Q 010034 170 VTGSVPPPRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHY 246 (519)
Q Consensus 170 ~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~ 246 (519)
....+ ..++.. ++ .||+........ . -+.+.+||+..+...........+... -..+++ .++.
T Consensus 186 ---~~~~p---~gl~~spdg~~lyv~~~~~~~~-~------~~~i~~~~~~~~~l~~~~~~~~~~~~~-pdgi~~d~~G~ 251 (305)
T 3dr2_A 186 ---DLDHP---NGLAFSPDEQTLYVSQTPEQGH-G------SVEITAFAWRDGALHDRRHFASVPDGL-PDGFCVDRGGW 251 (305)
T ss_dssp ---EESSE---EEEEECTTSSEEEEEECCC----C------CCEEEEEEEETTEEEEEEEEECCSSSC-CCSEEECTTSC
T ss_pred ---cCCCC---cceEEcCCCCEEEEEecCCcCC-C------CCEEEEEEecCCCccCCeEEEECCCCC-CCeEEECCCCC
Confidence 11111 233333 33 588764321100 0 134556676655432211000111111 112333 4566
Q ss_pred EEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEccc
Q 010034 247 LLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 247 iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~ 284 (519)
||+..+ +.|++||++...-..+..
T Consensus 252 lwv~~~--------------~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 252 LWSSSG--------------TGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp EEECCS--------------SEEEEECTTSCEEEEEEC
T ss_pred EEEecC--------------CcEEEECCCCCEEEEEEC
Confidence 777431 348999997776665543
No 165
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.47 E-value=12 Score=35.57 Aligned_cols=210 Identities=10% Similarity=-0.080 Sum_probs=104.9
Q ss_pred EEEEEC-CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccC---
Q 010034 24 SAVNIG-KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFG--- 97 (519)
Q Consensus 24 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~--- 97 (519)
.++... ++.|||.... +.+.+||+.++..+.+..... ..+. ..-+.+++. +++||+.-....
T Consensus 84 gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~~-----~~~~-~~p~~i~~d~~~G~l~v~d~~~~~~~ 151 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCY------YHLSVVGSEGGHATQLATSVD-----GVPF-KWLYAVTVDQRTGIVYFTDVSTLYDD 151 (322)
T ss_dssp EEEEETTTTEEEEEETT------TEEEEECTTCEECEEEESEET-----TEEC-SCEEEEEECTTTCCEEEEESCSSCCT
T ss_pred eEEEcCCCCcEEEEECC------CCEEEEeCCCCEEEEecccCC-----CCcc-cccceEEEecCCCEEEEECCcccccc
Confidence 444443 6789987432 238889988766555532110 0111 122334443 568888632110
Q ss_pred ---------CcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCC---Cc
Q 010034 98 ---------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTIS---LE 164 (519)
Q Consensus 98 ---------~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t---~~ 164 (519)
......+++||+.+.+...+.. .+.. -...+...++ .+|+.-.. .+.+++|++.. .+
T Consensus 152 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~---p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~ 221 (322)
T 2fp8_A 152 RGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--ELHV---PGGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGT 221 (322)
T ss_dssp TCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--EESC---CCEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTC
T ss_pred cccceehcccCCCceEEEEeCCCCEEEEecc--CCcc---CcceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCc
Confidence 0122469999999887765542 1111 1234444444 58876321 24689999875 34
Q ss_pred EEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEe
Q 010034 165 WMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG 243 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~ 243 (519)
.+.+. ..+.| ..++.. +++|||......... ...-.-..+.+||++...-..+..+...+. ....+++..
T Consensus 222 ~~~~~---~~~gP---~gi~~d~~G~l~va~~~~~~~~--~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~-~~~~~~~~~ 292 (322)
T 2fp8_A 222 AEVLV---KIPNP---GNIKRNADGHFWVSSSEELDGN--MHGRVDPKGIKFDEFGNILEVIPLPPPFAG-EHFEQIQEH 292 (322)
T ss_dssp EEEEE---ECSSE---EEEEECTTSCEEEEEEEETTSS--TTSCEEEEEEEECTTSCEEEEEECCTTTTT-SCCCEEEEE
T ss_pred cceEE---eCCCC---CCeEECCCCCEEEEecCccccc--ccCCCccEEEEECCCCCEEEEEECCCCCcc-ccceEEEEe
Confidence 44433 22221 223333 568888753311000 000001446778887655555553321111 122234456
Q ss_pred CCEEEEEeccCCCCCcccccceeCcEEEEEcCC
Q 010034 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (519)
Q Consensus 244 ~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t 276 (519)
+++|||.+.. .+.|.+|++..
T Consensus 293 ~g~L~v~~~~------------~~~i~~~~~~~ 313 (322)
T 2fp8_A 293 DGLLYIGTLF------------HGSVGILVYDK 313 (322)
T ss_dssp TTEEEEECSS------------CSEEEEEEC--
T ss_pred CCEEEEeecC------------CCceEEEeccc
Confidence 8899986532 25678888654
No 166
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=90.08 E-value=6.6 Score=35.21 Aligned_cols=150 Identities=13% Similarity=0.204 Sum_probs=79.1
Q ss_pred eEEEEeCCeEEEEccccCCcCCCcEEEEECCC--CeEEEEee---CCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCC
Q 010034 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI--WQWSELTS---FGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWL 152 (519)
Q Consensus 80 h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t--~~W~~~~~---~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~ 152 (519)
-+++.+++++|+|=| +.+|+++... ........ -..+|... -|+.. .++++|+|-|
T Consensus 10 DAi~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~I---DAa~~~~~~~~~yfFkG------- 72 (195)
T 1itv_A 10 DAIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRKL---DSVFEEPLSKKLFFFSG------- 72 (195)
T ss_dssp SEEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSSC---SEEEECTTTCCEEEEET-------
T ss_pred CEEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCCc---cEEEEECCCCeEEEEeC-------
Confidence 345557999999976 3478887755 23322221 12355432 23332 3568999977
Q ss_pred CcEEEEECCCCcE-EEeccCCCCCC--cccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceE-----E
Q 010034 153 SDVYVLDTISLEW-MQLPVTGSVPP--PRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-----Q 224 (519)
Q Consensus 153 ~~v~~yd~~t~~W-~~l~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~-----~ 224 (519)
+..|+|+..+..- +.|..- -+|. .....+....++++|+|-|. ..++||..+++-. .
T Consensus 73 ~~yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDAA~~~~~g~~yfFkg~--------------~ywr~d~~~~~~~~gyPr~ 137 (195)
T 1itv_A 73 RQVWVYTGASVLGPRRLDKL-GLGADVAQVTGALRSGRGKMLLFSGR--------------RLWRFDVKAQMVDPRSASE 137 (195)
T ss_dssp TEEEEEETTEEEEEEEGGGG-TCCTTCCCCCEEEECSTTEEEEEETT--------------EEEEEETTTTEECGGGCEE
T ss_pred CEEEEEcCCccCCCEEeeec-ccCCCccceeEEEEcCCCeEEEEeCC--------------EEEEEeCCcccccCCCccC
Confidence 3478887543211 112100 1232 23444444336799999662 2344555544321 1
Q ss_pred ec--CCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCe
Q 010034 225 LK--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (519)
Q Consensus 225 i~--~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~ 278 (519)
+. -+ .+|. . -.++...++.+|+|-| +..|+||..+..
T Consensus 138 i~~~w~-Gvp~-~-idaa~~~~g~~Yffkg--------------~~y~~~~~~~~~ 176 (195)
T 1itv_A 138 VDRMFP-GVPL-D-THDVFQFREKAYFCQD--------------RFYWRVSSRSEL 176 (195)
T ss_dssp HHHHST-TSCS-S-CSEEEEETTEEEEEET--------------TEEEEEECCTTC
T ss_pred hhhcCC-CCCC-C-CCEEEEeCCeEEEEeC--------------CEEEEEECCccE
Confidence 11 01 1232 1 2244556799999987 457999987664
No 167
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.00 E-value=8.4 Score=37.37 Aligned_cols=68 Identities=7% Similarity=-0.022 Sum_probs=35.9
Q ss_pred eEEEEccccCCcCCCcEEEEECCCCe--EEEEeeCC-----CC----CC-CCCccEEEEECCcEEEEEecCCCCcCCCcE
Q 010034 88 HMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFG-----DL----PS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDV 155 (519)
Q Consensus 88 ~iyv~GG~~~~~~~~dv~~yd~~t~~--W~~~~~~g-----~~----P~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v 155 (519)
.+++.|+.++ .+.+||+.+.. ...+.... .. .. ...-.+++...++..++.|+.++ .+
T Consensus 200 ~ll~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i 269 (408)
T 4a11_B 200 YILATASADS-----RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN-----RM 269 (408)
T ss_dssp TEEEEEETTS-----CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-----CE
T ss_pred cEEEEEcCCC-----cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC-----eE
Confidence 3777877654 48888887653 11111000 00 01 11112233335556777777654 38
Q ss_pred EEEECCCCcE
Q 010034 156 YVLDTISLEW 165 (519)
Q Consensus 156 ~~yd~~t~~W 165 (519)
..||+.+.+-
T Consensus 270 ~vwd~~~~~~ 279 (408)
T 4a11_B 270 RLWNSSNGEN 279 (408)
T ss_dssp EEEETTTCCB
T ss_pred EEEECCCCcc
Confidence 8999887654
No 168
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.99 E-value=2.2 Score=42.96 Aligned_cols=98 Identities=9% Similarity=0.031 Sum_probs=53.0
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEE-CCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
++.+++.|+.++ .+.++|+.+..-..... .......-.+++.. .++.+++.|+.++. +.++|+.+..
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~--~~gH~~~V~~l~f~p~~~~~l~s~s~D~~-----v~iwd~~~~~ 198 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIK--GIGAGGSITGLKFNPLNTNQFYASSMEGT-----TRLQDFKGNI 198 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEEC--CCSSSCCCCEEEECSSCTTEEEEECSSSC-----EEEEETTSCE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEE--ccCCCCCEEEEEEeCCCCCEEEEEeCCCE-----EEEeeccCCc
Confidence 456888888665 48888987765433321 01111112233332 34566777776653 7888998887
Q ss_pred EEEeccCCCCCCcccCeeEEEe-CCEEEEEcccC
Q 010034 165 WMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRG 197 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~ 197 (519)
...+.... .......++... ++.+++.|+.+
T Consensus 199 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 199 LRVFASSD--TINIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp EEEEECCS--SCSCCCCCEEEETTTTEEEEECSS
T ss_pred eeEEeccC--CCCccEEEEEECCCCCEEEEEeCC
Confidence 66654211 111112233333 56777777653
No 169
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.87 E-value=6.7 Score=45.25 Aligned_cols=70 Identities=10% Similarity=0.031 Sum_probs=42.1
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
+++.++.|+.++ .+.+||..++....... .... .-.+++...+++.++.||.++ .+..||..+.+.
T Consensus 972 ~g~~l~~g~~~g-----~i~i~d~~~~~~~~~~~---~h~~-~v~~l~~s~dg~~l~s~~~dg-----~i~vwd~~~~~~ 1037 (1249)
T 3sfz_A 972 HLEYVAFGDEDG-----AIKIIELPNNRVFSSGV---GHKK-AVRHIQFTADGKTLISSSEDS-----VIQVWNWQTGDY 1037 (1249)
T ss_dssp TSSEEEEEETTS-----CCEEEETTTTSCEEECC---CCSS-CCCCEEECSSSSCEEEECSSS-----BEEEEETTTTEE
T ss_pred CCCEEEEEcCCC-----CEEEEEcCCCceeeecc---cCCC-ceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCce
Confidence 556667776543 47889988775433321 1111 122344445667777777654 488999998876
Q ss_pred EEec
Q 010034 166 MQLP 169 (519)
Q Consensus 166 ~~l~ 169 (519)
..+.
T Consensus 1038 ~~~~ 1041 (1249)
T 3sfz_A 1038 VFLQ 1041 (1249)
T ss_dssp ECCB
T ss_pred EEEe
Confidence 6443
No 170
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.66 E-value=12 Score=35.62 Aligned_cols=114 Identities=10% Similarity=0.022 Sum_probs=61.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe---CCeEEEEccccCCcCCCcEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGDFW 105 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~dv~ 105 (519)
.++..++.|+.+ ..+.+||+.++....+.... ..... -.+++.. ++.+++.|+.++ .+.
T Consensus 23 ~~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~-------gH~~~-V~~v~~~~~~~~~~l~s~s~D~-----~v~ 84 (316)
T 3bg1_A 23 YYGTRLATCSSD-----RSVKIFDVRNGGQILIADLR-------GHEGP-VWQVAWAHPMYGNILASCSYDR-----KVI 84 (316)
T ss_dssp GGGCEEEEEETT-----TEEEEEEEETTEEEEEEEEE-------CCSSC-EEEEEECCGGGSSCEEEEETTS-----CEE
T ss_pred CCCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEc-------CCCcc-EEEEEeCCCCCCCEEEEEECCC-----EEE
Confidence 346677777754 35777888776543332110 11111 1223322 256777777654 488
Q ss_pred EEECCCCeEEEEeeCCCCCCCC-CccEEEEECC--cEEEEEecCCCCcCCCcEEEEECCCC-cEEEe
Q 010034 106 VLDTDIWQWSELTSFGDLPSPR-DFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL-EWMQL 168 (519)
Q Consensus 106 ~yd~~t~~W~~~~~~g~~P~~r-~~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l 168 (519)
++|+.+..|..+.. +.... .-.+++...+ +.+++.|+.++. +..+|..+. .|...
T Consensus 85 iWd~~~~~~~~~~~---~~~h~~~V~~v~~~p~~~g~~lasgs~D~~-----i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 85 IWREENGTWEKSHE---HAGHDSSVNSVCWAPHDYGLILACGSSDGA-----ISLLTYTGEGQWEVK 143 (316)
T ss_dssp EECCSSSCCCEEEE---ECCCSSCCCEEEECCTTTCSCEEEECSSSC-----EEEEEECSSSCEEEC
T ss_pred EEECCCCcceEEEE---ccCCCCceEEEEECCCCCCcEEEEEcCCCC-----EEEEecCCCCCccee
Confidence 89998887755442 11111 1123333332 567778876653 677777665 46543
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=89.64 E-value=7.1 Score=37.96 Aligned_cols=216 Identities=11% Similarity=0.017 Sum_probs=103.3
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
.|++.++|....++ ...+|++|+.+.+-..+... +..........-+++..+++... ..++++|
T Consensus 45 pDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~---------~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d 108 (388)
T 3pe7_A 45 RDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEG---------RGDNTFGGFLSPDDDALFYVKDG-----RNLMRVD 108 (388)
T ss_dssp TTSCEEEEEECTTS--SCEEEEEETTTCEEEECCCS---------SCBCSSSCEECTTSSEEEEEETT-----TEEEEEE
T ss_pred CCCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeC---------CCCCccceEEcCCCCEEEEEeCC-----CeEEEEE
Confidence 34554555543211 24699999999887776422 11111112233344444443322 3699999
Q ss_pred CCCCeEEEEeeCCCCCCCCCccEEEE-ECCcEEEEEecCC-----------------CCcCCCcEEEEECCCCcEEEecc
Q 010034 109 TDIWQWSELTSFGDLPSPRDFAAASA-IGNRKIVMYGGWD-----------------GKKWLSDVYVLDTISLEWMQLPV 170 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~~r~~~~~~~-~~~~~iyv~GG~~-----------------~~~~~~~v~~yd~~t~~W~~l~~ 170 (519)
+.+++-..+.. .|.......... -.+++.++.--.. .......++.+|+.+.+-..+..
T Consensus 109 ~~~g~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 185 (388)
T 3pe7_A 109 LATLEENVVYQ---VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ 185 (388)
T ss_dssp TTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE
T ss_pred CCCCcceeeee---chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec
Confidence 99988766653 443322222222 2333333311000 01123679999999988777651
Q ss_pred CCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCC-cceeEEEEeCCE-E
Q 010034 171 TGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSS-RCGHTITSGGHY-L 247 (519)
Q Consensus 171 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~-r~~~s~~~~~~~-i 247 (519)
.+ ....+....- +++.+++.......... ..++.+|..+.....+. ..+.. ...+.+..-+++ |
T Consensus 186 ---~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~------~~l~~~d~~~~~~~~l~---~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 186 ---EN-QWLGHPIYRPYDDSTVAFCHEGPHDLVD------ARMWLINEDGTNMRKVK---THAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp ---ES-SCEEEEEEETTEEEEEEEEECSCTTTSS------CSEEEEETTSCCCEESC---CCCTTEEEEEEEECTTSSCE
T ss_pred ---CC-ccccccEECCCCCCEEEEEEecCCCCCc------ceEEEEeCCCCceEEee---eCCCCcccccceECCCCCEE
Confidence 11 1222333333 45544443322111111 34455677777666665 21211 122222233444 4
Q ss_pred EEEeccCCCCCcccccceeCcEEEEEcCCCeEEEccc
Q 010034 248 LLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 248 yv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~ 284 (519)
+....... . ....++++|+.+.+-+.+..
T Consensus 253 ~~~~~~~~-~-------~~~~l~~~d~~~g~~~~l~~ 281 (388)
T 3pe7_A 253 VYVSYLKG-S-------PDRFIYSADPETLENRQLTS 281 (388)
T ss_dssp EEEEEETT-C-------CCEEEEEECTTTCCEEEEEE
T ss_pred EEEecCCC-C-------CcceEEEEecCCCceEEEEc
Confidence 33332211 1 11249999999887766644
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.59 E-value=14 Score=34.75 Aligned_cols=173 Identities=10% Similarity=0.016 Sum_probs=85.9
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCe--EEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~--W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
.+++++.|..+ +.+..+|.++++ |+.-. +.....|.+.+..++.+++.+ .+.++.||+ +.
T Consensus 4 ~~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 4 PQHLLVGGSGW-----NKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CCEEEEECTTC-----SEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CCcEEEeeCCC-----CEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 35677776543 458899997775 65432 111234666677777888832 245899998 44
Q ss_pred c--EEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCc-eEEecCCCCC--CCCcce
Q 010034 164 E--WMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG-WTQLKLPGQA--PSSRCG 237 (519)
Q Consensus 164 ~--W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~-W~~i~~~g~~--P~~r~~ 237 (519)
+ |+.-. +.....+++... ++++++..... . ..+..+|++... |+... .+.. +.....
T Consensus 66 ~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~-~----------~~v~~vd~~Gk~l~~~~~-~~~~~~~~~~~~ 128 (276)
T 3no2_A 66 RELWNIAA-----PAGCEMQTARILPDGNALVAWCGH-P----------STILEVNMKGEVLSKTEF-ETGIERPHAQFR 128 (276)
T ss_dssp CEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST-T----------EEEEEECTTSCEEEEEEE-CCSCSSGGGSCS
T ss_pred CEEEEEcC-----CCCccccccEECCCCCEEEEecCC-C----------CEEEEEeCCCCEEEEEec-cCCCCccccccc
Confidence 3 66432 111122333444 56666554321 1 234556765442 33321 1111 111111
Q ss_pred eEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCC-eEEEcccCCCCCCCCcceEEEEeCCEEEEEccCC
Q 010034 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA-QWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFD 311 (519)
Q Consensus 238 ~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~-~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~ 311 (519)
......++.+++.... .+.+.+||++.+ .|+.-.. . ....+.+..++.++|.+..+
T Consensus 129 ~v~~~~~G~~lv~~~~------------~~~v~~~d~~G~~~w~~~~~-~-----~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 129 QINKNKKGNYLVPLFA------------TSEVREIAPNGQLLNSVKLS-G-----TPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp CCEECTTSCEEEEETT------------TTEEEEECTTSCEEEEEECS-S-----CCCEEEECTTSCEEEECBTT
T ss_pred CceECCCCCEEEEecC------------CCEEEEECCCCCEEEEEECC-C-----CccceeEcCCCCEEEEeCCC
Confidence 2233455566654431 145888888733 3553221 1 11123333367788776643
No 173
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.53 E-value=16 Score=35.39 Aligned_cols=93 Identities=17% Similarity=0.077 Sum_probs=51.6
Q ss_pred CeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 87 ~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
+..++.|+.++ .+.++|+.+.+....-. .+.. .-.+++...++..++.|+.++. +..||+.+.+-.
T Consensus 210 g~~l~sgs~Dg-----~v~~wd~~~~~~~~~~~---~h~~-~v~~v~~~p~~~~l~s~s~D~~-----v~lwd~~~~~~~ 275 (354)
T 2pbi_B 210 GNTFVSGGCDK-----KAMVWDMRSGQCVQAFE---THES-DVNSVRYYPSGDAFASGSDDAT-----CRLYDLRADREV 275 (354)
T ss_dssp CCEEEEEETTS-----CEEEEETTTCCEEEEEC---CCSS-CEEEEEECTTSSEEEEEETTSC-----EEEEETTTTEEE
T ss_pred CCEEEEEeCCC-----eEEEEECCCCcEEEEec---CCCC-CeEEEEEeCCCCEEEEEeCCCe-----EEEEECCCCcEE
Confidence 46778887664 48899998887544331 1111 1123333345677788876653 888998877544
Q ss_pred EeccCCCCCCcccCeeEEEe--CCEEEEEccc
Q 010034 167 QLPVTGSVPPPRCGHTATMV--EKRLLIYGGR 196 (519)
Q Consensus 167 ~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 196 (519)
..- ...........+.+ ++++++.|+.
T Consensus 276 ~~~---~~~~~~~~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 276 AIY---SKESIIFGASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp EEE---CCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EEE---cCCCcccceeEEEEeCCCCEEEEEEC
Confidence 332 11111222233333 5666666664
No 174
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=89.25 E-value=7 Score=37.17 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=54.9
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeC----CeEEEEccccCCcCCCcEEEE
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID----CHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~----~~iyv~GG~~~~~~~~dv~~y 107 (519)
.+++.|+... .-..+.+||+.+++.......+ ....-.+++... +.+++.|+.++ .+.+|
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iw 95 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIE---------KAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIW 95 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEEE---------ESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEE
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeeec---------ccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEE
Confidence 6777776411 1245888999888765543211 111122233322 46777777553 47888
Q ss_pred ECCCCe--EEEEeeCCCCCCCCCccEEEE------ECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 108 DTDIWQ--WSELTSFGDLPSPRDFAAASA------IGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 108 d~~t~~--W~~~~~~g~~P~~r~~~~~~~------~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
|..+.. -..+. ..... -.++.. -.++..++.|+.++ .+..||+.+.+
T Consensus 96 d~~~~~~~~~~~~----~~~~~-v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~ 150 (357)
T 3i2n_A 96 NLEAPEMPVYSVK----GHKEI-INAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKD 150 (357)
T ss_dssp CTTSCSSCSEEEC----CCSSC-EEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCS
T ss_pred eCCCCCccEEEEE----ecccc-eEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCC
Confidence 887764 12221 11111 111211 12445677777654 38888988764
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.24 E-value=4.1 Score=39.70 Aligned_cols=108 Identities=11% Similarity=0.064 Sum_probs=60.3
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLP 124 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P 124 (519)
..+|.+|+....+..+... .+ .......+. -+++.+++...........++++|+.+++...+.. .+
T Consensus 216 ~~l~~~d~~~~~~~~l~~~--------~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---~~ 283 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEH--------AE-GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV---MP 283 (396)
T ss_dssp CCCEEEETTSCCCEESSCC--------CT-TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE---CC
T ss_pred ceEEEEECCCCceeEeecc--------CC-CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee---CC
Confidence 5799999988877766421 01 111122222 24553344433322222349999999988877763 33
Q ss_pred CCCCccEEEEEC-CcEEEEEecCCC-----------CcCCCcEEEEECCCCcEEEec
Q 010034 125 SPRDFAAASAIG-NRKIVMYGGWDG-----------KKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 125 ~~r~~~~~~~~~-~~~iyv~GG~~~-----------~~~~~~v~~yd~~t~~W~~l~ 169 (519)
. +..+... +++++++++.+. ......++.+|+.+.+...+.
T Consensus 284 ~----~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 284 P----CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp S----EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred C----CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 2 1233334 566666654321 112357999999988877665
No 176
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=89.11 E-value=11 Score=40.27 Aligned_cols=80 Identities=10% Similarity=-0.073 Sum_probs=42.5
Q ss_pred EECCcEEEEEcCcCCC----ccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCC
Q 010034 27 NIGKSKVVVFGGLVDK----RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 27 ~~~~~~lyv~GG~~~~----~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~ 102 (519)
...|++.++++..... .....++++|+.+++-..+.... ....+.......-+++.++++.. .
T Consensus 68 ~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-------~~~~~~~~~~~SPdG~~la~~~~------~ 134 (723)
T 1xfd_A 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-------VSNAKLQYAGWGPKGQQLIFIFE------N 134 (723)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-------CCSCCCSBCCBCSSTTCEEEEET------T
T ss_pred ECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-------cccccccccEECCCCCEEEEEEC------C
Confidence 3445565565543322 22478999999988765554221 11111122222224544444432 3
Q ss_pred cEEEEECCCCeEEEEee
Q 010034 103 DFWVLDTDIWQWSELTS 119 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~ 119 (519)
+++++|..+++-.++..
T Consensus 135 ~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 135 NIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp EEEEESSSSSCCEEEEC
T ss_pred eEEEEECCCCceEEEec
Confidence 68888888877766653
No 177
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=89.08 E-value=15 Score=36.51 Aligned_cols=63 Identities=6% Similarity=-0.135 Sum_probs=32.8
Q ss_pred EEEEccccCCcCCCcEEEEECCCC---eEEE--EeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 89 MFIFGGRFGSRRLGDFWVLDTDIW---QWSE--LTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 89 iyv~GG~~~~~~~~dv~~yd~~t~---~W~~--~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
+++.|+.++ .+.++|+.+. .+.. ... -......-++++... ++.+++.|+.++ .+.+||+.+
T Consensus 196 ~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~--~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASDDH-----TICLWDINATPKEHRVIDAKNI--FTGHTAVVEDVAWHLLHESLFGSVADDQ-----KLMIWDTRN 263 (430)
T ss_dssp EEEEECTTS-----CEEEEETTSCCBGGGEEECSEE--ECCCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred eEEEEeCCC-----eEEEEeCCCCCCCCceecccee--ecCCCCCEeeeEEeCCCCCEEEEEeCCC-----eEEEEECCC
Confidence 677776554 4888998762 1211 110 001111122333332 446777776543 488899886
Q ss_pred C
Q 010034 163 L 163 (519)
Q Consensus 163 ~ 163 (519)
.
T Consensus 264 ~ 264 (430)
T 2xyi_A 264 N 264 (430)
T ss_dssp S
T ss_pred C
Confidence 5
No 178
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.71 E-value=20 Score=35.41 Aligned_cols=215 Identities=13% Similarity=0.067 Sum_probs=110.7
Q ss_pred EEEEEcCC--CcEEeeeecCCCCCCCCCCCCcceeEEEEe---CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCC
Q 010034 48 VVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (519)
Q Consensus 48 ~~~yd~~~--~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~ 122 (519)
+++++... .+|+..... +....-++++.. .+.||+.+.... .-.-+++.+-...+|+++.....
T Consensus 33 l~~~~~~~~g~~W~~~~~~---------~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPV---------FLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEECTTSCSEEEEEEE---------STTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCC
T ss_pred eEEEECCCCCCCceECCcc---------CCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCcccc
Confidence 77787765 689886411 222234555554 457887653211 00146777666778998863211
Q ss_pred CCCC--C-----Ccc--EEEEE--C-CcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCC--------------
Q 010034 123 LPSP--R-----DFA--AASAI--G-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP-------------- 176 (519)
Q Consensus 123 ~P~~--r-----~~~--~~~~~--~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~-------------- 176 (519)
++.. + ... +.++. . .+.+|+.+. ...+++.+-...+|+.+......|.
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCC
Confidence 2211 1 111 22222 1 457887642 2348888878889999852101121
Q ss_pred cccCeeEEEe---CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCC---CCCCC-----cceeEEEEe--
Q 010034 177 PRCGHTATMV---EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPG---QAPSS-----RCGHTITSG-- 243 (519)
Q Consensus 177 ~r~~~~~~~~---~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g---~~P~~-----r~~~s~~~~-- 243 (519)
...-++++.. .+.||+..+. ..+++.+....+|+.+.... .+|.+ ...+++++.
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~-------------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~ 242 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSS-------------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPA 242 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEET-------------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSS
T ss_pred CCceeEEEECCCCCCEEEEEECC-------------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCC
Confidence 1112334333 2567775421 12344466778999885310 12221 223444442
Q ss_pred -CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCC--CCcceEEEEe---CCEEEEEc
Q 010034 244 -GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPP--ARAYHSMTCL---GSLYLLFG 308 (519)
Q Consensus 244 -~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~--~R~~~~~v~~---~~~iyv~G 308 (519)
.+.||+..+ ..+++.+-...+|+.+... .|. ..+..+++.. .+.||+..
T Consensus 243 ~~~~l~vg~~--------------~gl~~s~D~G~tW~~~~~~--l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 243 APDILYQQNH--------------CGIYRMDRREGVWKRIGDA--MPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp STTEEEEEET--------------TEEEEEETTTTEEECGGGG--SCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCEEEEEcC--------------CeEEEeCCCCCcceECCCC--CCCCCccceEEEEECCCCCCEEEEEe
Confidence 256776321 3478888889999998642 121 1333444442 46777763
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=88.58 E-value=17 Score=34.54 Aligned_cols=196 Identities=12% Similarity=0.083 Sum_probs=94.5
Q ss_pred cCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC
Q 010034 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (519)
Q Consensus 44 ~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~ 123 (519)
....+|++|+.+++-..+. ........-+++.+++....+......+|++|+.+++...+.. .
T Consensus 41 ~~~~l~~~d~~~~~~~~l~--------------~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~ 103 (347)
T 2gop_A 41 YENTIVIENLKNNARRFIE--------------NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE---A 103 (347)
T ss_dssp EEEEEEEEETTTCCEEEEE--------------SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE---E
T ss_pred ccceEEEEeCCCCceEEcc--------------cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc---C
Confidence 4567999999887755541 1111222224544444433321223469999999998877763 2
Q ss_pred CCCCCccEEEEECCcEEEEEecCC------------------CC----cCCCcEEEEECCCCcE-EEeccCCCCCCcccC
Q 010034 124 PSPRDFAAASAIGNRKIVMYGGWD------------------GK----KWLSDVYVLDTISLEW-MQLPVTGSVPPPRCG 180 (519)
Q Consensus 124 P~~r~~~~~~~~~~~~iyv~GG~~------------------~~----~~~~~v~~yd~~t~~W-~~l~~~~~~p~~r~~ 180 (519)
+. ....+.-.+++.++++... +. .....++++|+.+++. ..+. . + ..
T Consensus 104 ~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~---~-~---~~ 173 (347)
T 2gop_A 104 KN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE---K-P---RF 173 (347)
T ss_dssp SE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEE---E-E---TT
T ss_pred CC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec---C-C---Cc
Confidence 21 2222333344433333321 10 1135699999999987 6665 2 2 22
Q ss_pred eeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcc
Q 010034 181 HTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLS 260 (519)
Q Consensus 181 ~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~ 260 (519)
.......+.+++.+......... .....++.+| ++++..+.. . . ..... .-+++.+++.+.....
T Consensus 174 ~~~~~spdg~~~~~~~~~~~~~~---~~~~~l~~~d--~~~~~~l~~---~--~-~~~~~-spdg~~l~~~~~~~~~--- 238 (347)
T 2gop_A 174 SSGIWHRDKIVVNVPHREIIPQY---FKFWDIYIWE--DGKEEKMFE---K--V-SFYAV-DSDGERILLYGKPEKK--- 238 (347)
T ss_dssp CEEEEETTEEEEEEECCCSSCCS---SCCEEEEEEE--TTEEEEEEE---E--E-SEEEE-EECSSCEEEEECCSSS---
T ss_pred ccccCCCCeEEEEEecccccccc---cccccEEEeC--CCceEEecc---C--c-ceeeE-CCCCCEEEEEEccccC---
Confidence 33333333355555332211000 0012344456 667776652 1 1 11122 4455444444332210
Q ss_pred cccceeCcEEEEEcCCCeEEEccc
Q 010034 261 RYDIYYNDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 261 ~~~~~~~~v~~yd~~t~~W~~v~~ 284 (519)
.......+|++| +..+..+..
T Consensus 239 -~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 239 -YMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp -CCCSSCEEEEEC--SSCEEESST
T ss_pred -CccccceEEEEC--CCceEeccc
Confidence 001236799999 666766654
No 180
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=88.58 E-value=13 Score=33.22 Aligned_cols=142 Identities=11% Similarity=0.109 Sum_probs=73.3
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCC--CcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCc
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSR 99 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~--~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~ 99 (519)
+++.+ ++.+|+|=| +.+|+++... ........... =+.+|. .--++... ++++|+|-|
T Consensus 11 Ai~~~-~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~---w~glP~--~IDAa~~~~~~~~~yfFkG----- 72 (195)
T 1itv_A 11 AIAEI-GNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADK---WPALPR--KLDSVFEEPLSKKLFFFSG----- 72 (195)
T ss_dssp EEEEE-TTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHH---CTTSCS--SCSEEEECTTTCCEEEEET-----
T ss_pred EEEEe-CCEEEEEEC-------CEEEEEECCccccCCCcEEhhhc---cCCCCC--CccEEEEECCCCeEEEEeC-----
Confidence 34444 478999987 4588887755 22322211100 012332 22233333 678999977
Q ss_pred CCCcEEEEECCCCeEEEEeeCC-CCCCCCCccEEEE-ECCcEEEEEecCCCCcCCCcEEEEECCCCcEEE-----ecc-C
Q 010034 100 RLGDFWVLDTDIWQWSELTSFG-DLPSPRDFAAASA-IGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LPV-T 171 (519)
Q Consensus 100 ~~~dv~~yd~~t~~W~~~~~~g-~~P~~r~~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-----l~~-~ 171 (519)
+.+|+|+..+..- ..+... .+|.....--+++ -.++++|+|-| +..|+||..+++=.. ++. =
T Consensus 73 --~~yw~~~~~~~~~-Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w 142 (195)
T 1itv_A 73 --RQVWVYTGASVLG-PRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMF 142 (195)
T ss_dssp --TEEEEEETTEEEE-EEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHS
T ss_pred --CEEEEEcCCccCC-CEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcC
Confidence 4589998653221 111111 2444211223333 35679999976 348999988764211 110 0
Q ss_pred CCCCCcccCeeEEEeCCEEEEEcc
Q 010034 172 GSVPPPRCGHTATMVEKRLLIYGG 195 (519)
Q Consensus 172 ~~~p~~r~~~~~~~~~~~lyv~GG 195 (519)
..+| ..-.++...++.+|+|-|
T Consensus 143 ~Gvp--~~idaa~~~~g~~Yffkg 164 (195)
T 1itv_A 143 PGVP--LDTHDVFQFREKAYFCQD 164 (195)
T ss_dssp TTSC--SSCSEEEEETTEEEEEET
T ss_pred CCCC--CCCCEEEEeCCeEEEEeC
Confidence 0112 222344455799999977
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.37 E-value=28 Score=36.68 Aligned_cols=104 Identities=13% Similarity=0.009 Sum_probs=56.0
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
+.+||.... .+.+.++|+.+++-...- +.+..-|.+++. +..+|+.+. .+.+.++|
T Consensus 167 ~~~~V~~~~-----~~~V~viD~~t~~v~~~i-----------~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD 224 (567)
T 1qks_A 167 NLFSVTLRD-----AGQIALIDGSTYEIKTVL-----------DTGYAVHISRLSASGRYLFVIGR------DGKVNMID 224 (567)
T ss_dssp GEEEEEETT-----TTEEEEEETTTCCEEEEE-----------ECSSCEEEEEECTTSCEEEEEET------TSEEEEEE
T ss_pred ceEEEEeCC-----CCeEEEEECCCCeEEEEE-----------eCCCCccceEECCCCCEEEEEcC------CCeEEEEE
Confidence 467776542 357999999987643321 222233444443 346787542 24699999
Q ss_pred CC--CCeEE-EEeeCCCCCCCCCccEEEEE----CCc-EEEEEecCCCCcCCCcEEEEECCCCcEEE
Q 010034 109 TD--IWQWS-ELTSFGDLPSPRDFAAASAI----GNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (519)
Q Consensus 109 ~~--t~~W~-~~~~~g~~P~~r~~~~~~~~----~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~ 167 (519)
+. +.+=. ++. .+..-..+++- .++ .+|+..-. .+.+.++|..|.+=.+
T Consensus 225 ~~~~t~~~v~~i~------~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 225 LWMKEPTTVAEIK------IGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKK 280 (567)
T ss_dssp TTSSSCCEEEEEE------CCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEE
T ss_pred CCCCCCcEeEEEe------cCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEE
Confidence 95 54322 222 22211233333 134 66665432 2557888988766444
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=88.10 E-value=18 Score=34.30 Aligned_cols=58 Identities=19% Similarity=0.337 Sum_probs=38.1
Q ss_pred CcEEEEECCCCeE-EEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCc---C-CCcEEEEECCCCcEEEec
Q 010034 102 GDFWVLDTDIWQW-SELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---W-LSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 102 ~dv~~yd~~t~~W-~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~---~-~~~v~~yd~~t~~W~~l~ 169 (519)
..++++|+.+++. ..+.. + .....+...++ +++.+..+... . ...++.+| +.+++.+.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred ceEEEEECCCCeEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEec
Confidence 5699999999988 66652 2 33444555777 66665443321 2 45788999 77888775
No 183
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.32 E-value=24 Score=34.83 Aligned_cols=95 Identities=15% Similarity=0.097 Sum_probs=52.7
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLP 124 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P 124 (519)
+.|+++|..+++-..+-... .+.. .-.+++. -+++.++.|+.++ .+.++|+.+++-.... ..+
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~-------~~~~-~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~---~~h 188 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME-------QPGE-YISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNM---TSH 188 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC-------STTC-CEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE---CCC
T ss_pred CEEEEEECCCCCEEEEEEec-------CCCC-cEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEE---eCC
Confidence 46889999998766543211 1111 1122222 2567777887654 4889999988654333 122
Q ss_pred CCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 125 SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 125 ~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
..+ ..+... ++.+++.|+.++ .+..+|..+..
T Consensus 189 ~~~--v~~~s~-~~~~l~sgs~d~-----~i~~~d~~~~~ 220 (420)
T 4gga_A 189 SAR--VGSLSW-NSYILSSGSRSG-----HIHHHDVRVAE 220 (420)
T ss_dssp SSC--EEEEEE-ETTEEEEEETTS-----EEEEEETTSSS
T ss_pred CCc--eEEEee-CCCEEEEEeCCC-----ceeEeeecccc
Confidence 222 222333 346777777654 36667766544
No 184
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=87.23 E-value=15 Score=35.38 Aligned_cols=119 Identities=8% Similarity=-0.025 Sum_probs=57.8
Q ss_pred CC-eEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCcc-EEEEECCc-EEEEEecCCCCcCCCcEEEEEC--
Q 010034 86 DC-HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFA-AASAIGNR-KIVMYGGWDGKKWLSDVYVLDT-- 160 (519)
Q Consensus 86 ~~-~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~-~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~-- 160 (519)
++ .+|+.+... +.+.+||+.++++..+......+...... .++.-.++ .+|+.... + .+.+.+|++
T Consensus 221 dg~~l~v~~~~~-----~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~-~---~~~i~v~~~~~ 291 (361)
T 3scy_A 221 DGKFAYLINEIG-----GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL-K---ADGVAIFKVDE 291 (361)
T ss_dssp TSSEEEEEETTT-----CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS-S---SCEEEEEEECT
T ss_pred CCCEEEEEcCCC-----CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC-C---CCEEEEEEEcC
Confidence 44 477664322 45889998888876655322233322222 33333444 46655432 0 133566555
Q ss_pred CCCcEEEeccCCCCCCcccCeeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCCceEEec
Q 010034 161 ISLEWMQLPVTGSVPPPRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (519)
Q Consensus 161 ~t~~W~~l~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~ 226 (519)
.+.+++.+. ..+....-..++.. ++ .||+.+.. ... -.++.+|+.+++-+.+.
T Consensus 292 ~~g~~~~~~---~~~~g~~~~~~~~spdg~~l~~~~~~-~~~---------v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 292 TNGTLTKVG---YQLTGIHPRNFIITPNGKYLLVACRD-TNV---------IQIFERDQATGLLTDIK 346 (361)
T ss_dssp TTCCEEEEE---EEECSSCCCEEEECTTSCEEEEEETT-TTE---------EEEEEECTTTCCEEECS
T ss_pred CCCcEEEee---EecCCCCCceEEECCCCCEEEEEECC-CCC---------EEEEEEECCCCcEeecc
Confidence 577777664 22221111233333 44 45554422 111 12334577788777665
No 185
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=87.18 E-value=33 Score=36.33 Aligned_cols=125 Identities=13% Similarity=0.103 Sum_probs=64.8
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEc-CCC--cEEeeeecCCCCCCCCCCCCcceeEEEE--eCCe----EEEEccccCCcC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDI-DNK--LWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCH----MFIFGGRFGSRR 100 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~-~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~--~~~~----iyv~GG~~~~~~ 100 (519)
+++||+.+.+ .+.++++|. .++ .|+.-....... .+.+.+.......++ .+++ ||+... +
T Consensus 62 ~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~-~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-d---- 130 (599)
T 1w6s_A 62 DGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAA-RAVACCDLVNRGLAYWPGDGKTPALILKTQL-D---- 130 (599)
T ss_dssp TTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGG-GGGCSSCSCCCCCEEECCCSSSCCEEEEECT-T----
T ss_pred CCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccc-cccccccccccceEEEecCCcceeEEEEEcC-C----
Confidence 4789997753 246899999 776 487743211000 000000011122344 5666 877532 1
Q ss_pred CCcEEEEECCCCe--EEEEeeCCCCCCC-CCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEec
Q 010034 101 LGDFWVLDTDIWQ--WSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLP 169 (519)
Q Consensus 101 ~~dv~~yd~~t~~--W~~~~~~g~~P~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~ 169 (519)
..++.+|..|++ |+.-.. ..... ....+.++. ++.+|+-.+.........++.||..|.+ |+.-.
T Consensus 131 -g~l~AlDa~TG~~~W~~~~~--~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 131 -GNVAALNAETGETVWKVENS--DIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp -SEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred -CEEEEEECCCCCEEEeecCC--CCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 358999998874 875431 11011 111222334 4577764322111123569999999876 87654
No 186
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.12 E-value=20 Score=33.69 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=56.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCc----EEeeeecCCCCCCCCCCCCcceeEEEE-eCCe-EEEEccccCCcCCC
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKL----WFQPECTGNGSNGQVGPGPRAFHIAVA-IDCH-MFIFGGRFGSRRLG 102 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~----W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~-iyv~GG~~~~~~~~ 102 (519)
.++.+++.|+.+ ..+.+||+.+.. -..+.. ... .-.+++. -+++ .++.|+.++
T Consensus 21 ~~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~~l~~~~~dg----- 79 (342)
T 1yfq_A 21 PSKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR----------YKH-PLLCCNFIDNTDLQIYVGTVQG----- 79 (342)
T ss_dssp GGGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE----------CSS-CEEEEEEEESSSEEEEEEETTS-----
T ss_pred CCCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee----------cCC-ceEEEEECCCCCcEEEEEcCCC-----
Confidence 345566666643 457888887765 332221 111 1223333 3567 777777553
Q ss_pred cEEEEEC-CCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 103 DFWVLDT-DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 103 dv~~yd~-~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
.+.+||+ .+.....+.. .+....-.+++... +..++.|+.++ .+..||+.+
T Consensus 80 ~i~~wd~~~~~~~~~~~~---~~~~~~v~~l~~~~-~~~l~s~~~d~-----~i~iwd~~~ 131 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTN---NEANLGICRICKYG-DDKLIAASWDG-----LIEVIDPRN 131 (342)
T ss_dssp CEEEECSSSSSSEEECBS---CCCCSCEEEEEEET-TTEEEEEETTS-----EEEEECHHH
T ss_pred eEEEEEeccCCceEeccc---cCCCCceEEEEeCC-CCEEEEEcCCC-----eEEEEcccc
Confidence 5899999 8887655441 11111222333344 45666776554 377777654
No 187
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=86.95 E-value=20 Score=33.62 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=41.0
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCe----EEEEeeCCCCCCCCCccEEEEECCcE-EEEEecCCCCcCCCcEEEEEC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ----WSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDT 160 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~----W~~~~~~g~~P~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~ 160 (519)
++.+++.|+.++ .+.+||..+.. -..... ....-.+++...++. .++.|+.++ .+..||+
T Consensus 22 ~~~~l~~~~~d~-----~v~iw~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~ 86 (342)
T 1yfq_A 22 SKSLLLITSWDG-----SLTVYKFDIQAKNVDLLQSLR-----YKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDL 86 (342)
T ss_dssp GGTEEEEEETTS-----EEEEEEEETTTTEEEEEEEEE-----CSSCEEEEEEEESSSEEEEEEETTS-----CEEEECS
T ss_pred CCCEEEEEcCCC-----eEEEEEeCCCCccccceeeee-----cCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEe
Confidence 556667776543 47788876665 332221 112223444444557 777787654 4889999
Q ss_pred -CCCcEEEec
Q 010034 161 -ISLEWMQLP 169 (519)
Q Consensus 161 -~t~~W~~l~ 169 (519)
.+.+-..+.
T Consensus 87 ~~~~~~~~~~ 96 (342)
T 1yfq_A 87 IGSPSFQALT 96 (342)
T ss_dssp SSSSSEEECB
T ss_pred ccCCceEecc
Confidence 888776654
No 188
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.93 E-value=22 Score=33.95 Aligned_cols=192 Identities=10% Similarity=0.025 Sum_probs=93.0
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEEC
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~ 109 (519)
++.+++.||.+ ..+.+||+.+++-...-..+...... -.|. ..++..++.+.++-. ...+..||.
T Consensus 47 d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~~~~v~~~~--~~~~--~~s~s~D~~i~~w~~------~~~~~~~~~ 111 (343)
T 3lrv_A 47 DKWVCMCRCED-----GALHFTQLKDSKTITTITTPNPRTGG--EHPA--IISRGPCNRLLLLYP------GNQITILDS 111 (343)
T ss_dssp EEEEEEEEEET-----TEEEEEEESSSSCEEEEEEECCCTTC--CCCS--EEEECSTTEEEEEET------TTEEEEEET
T ss_pred CCCEEEEECCC-----CcEEEEECCCCcEEEEEecCCceeee--eCCc--eEEecCCCeEEEEEc------cCceEEeec
Confidence 35677888765 35778888776532211110000000 0111 222223455666532 135677888
Q ss_pred CCCe-EEEEeeCCCCCCCCCccEEEEEC--CcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe
Q 010034 110 DIWQ-WSELTSFGDLPSPRDFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (519)
Q Consensus 110 ~t~~-W~~~~~~g~~P~~r~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~ 186 (519)
.+.+ -.... .+....-.+++... ++.+++.|+.++. +..||+.+.+-.... .......-.++...
T Consensus 112 ~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~s~dg~-----i~~wd~~~~~~~~~~---~~~~~~~i~~~~~~ 179 (343)
T 3lrv_A 112 KTNKVLREIE----VDSANEIIYMYGHNEVNTEYFIWADNRGT-----IGFQSYEDDSQYIVH---SAKSDVEYSSGVLH 179 (343)
T ss_dssp TTCCEEEEEE----CCCSSCEEEEECCC---CCEEEEEETTCC-----EEEEESSSSCEEEEE---CCCSSCCCCEEEEC
T ss_pred CCcceeEEee----cCCCCCEEEEEcCCCCCCCEEEEEeCCCc-----EEEEECCCCcEEEEE---ecCCCCceEEEEEC
Confidence 8776 33333 11111112233334 5577787886654 889999988765543 11122112233333
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceE--EecCCCCCCCCcceeEEEE-eCCEEEEEeccCCCCCcccc
Q 010034 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT--QLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (519)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~--~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~ 262 (519)
++.+++.|+.+ ..+..||+.+..-. .+. + .....-.++.. .++..++.|+ .
T Consensus 180 pdg~~lasg~~d------------g~i~iwd~~~~~~~~~~~~--~--~h~~~v~~l~fs~~g~~l~s~~-~-------- 234 (343)
T 3lrv_A 180 KDSLLLALYSPD------------GILDVYNLSSPDQASSRFP--V--DEEAKIKEVKFADNGYWMVVEC-D-------- 234 (343)
T ss_dssp TTSCEEEEECTT------------SCEEEEESSCTTSCCEECC--C--CTTSCEEEEEECTTSSEEEEEE-S--------
T ss_pred CCCCEEEEEcCC------------CEEEEEECCCCCCCccEEe--c--cCCCCEEEEEEeCCCCEEEEEe-C--------
Confidence 56777777643 23455677666533 222 1 01111122333 3455566665 2
Q ss_pred cceeCcEEEEEcCCC
Q 010034 263 DIYYNDTIILDRLSA 277 (519)
Q Consensus 263 ~~~~~~v~~yd~~t~ 277 (519)
+.+.++|+.+.
T Consensus 235 ----~~v~iwd~~~~ 245 (343)
T 3lrv_A 235 ----QTVVCFDLRKD 245 (343)
T ss_dssp ----SBEEEEETTSS
T ss_pred ----CeEEEEEcCCC
Confidence 25788998764
No 189
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=86.92 E-value=4.5 Score=38.51 Aligned_cols=70 Identities=11% Similarity=0.038 Sum_probs=43.1
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
++++|+.++.+ +.++++|+.+++....-. .+.....+.++...++ .+|+.+..+ ..++.||+.+.+
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCc
Confidence 56778877643 468999999987654432 2221122344444444 577776432 459999999887
Q ss_pred EEEe
Q 010034 165 WMQL 168 (519)
Q Consensus 165 W~~l 168 (519)
-...
T Consensus 77 ~~~~ 80 (349)
T 1jmx_B 77 NTFH 80 (349)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 190
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.83 E-value=36 Score=36.30 Aligned_cols=192 Identities=12% Similarity=0.065 Sum_probs=90.4
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.|+.+ ..+.++|+.+..-...- .+ ..... .+++. -+++.++.|+.++ .+.++
T Consensus 440 ~~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~-~~--------h~~~v-~~~~~s~~~~~l~s~s~D~-----~i~iw 499 (694)
T 3dm0_A 440 SDGQFALSGSWD-----GELRLWDLAAGVSTRRF-VG--------HTKDV-LSVAFSLDNRQIVSASRDR-----TIKLW 499 (694)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEEEE-EC--------CSSCE-EEEEECTTSSCEEEEETTS-----CEEEE
T ss_pred CCCCEEEEEeCC-----CcEEEEECCCCcceeEE-eC--------CCCCE-EEEEEeCCCCEEEEEeCCC-----EEEEE
Confidence 445666666653 45788888776532221 11 11111 22222 3556666776553 47778
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEE-CCc--EEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEE
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAI-GNR--KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTAT 184 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~-~~~--~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~ 184 (519)
|.....-..+.. .....+..-.++.+ .++ ..++.|+.++ .+..||+.+.+-...- ...... -.++.
T Consensus 500 d~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~~---~~h~~~-v~~v~ 568 (694)
T 3dm0_A 500 NTLGECKYTISE--GGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRSTL---AGHTGY-VSTVA 568 (694)
T ss_dssp CTTSCEEEEECS--STTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEEE---CCCSSC-EEEEE
T ss_pred ECCCCcceeecc--CCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEEE---cCCCCC-EEEEE
Confidence 876543323321 11111111222333 222 4666776654 3888998877654332 111111 11222
Q ss_pred Ee-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCccccc
Q 010034 185 MV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYD 263 (519)
Q Consensus 185 ~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~ 263 (519)
.. ++++++.||.++ .+..+|+.+.+-... ......-++++...+..++.++..
T Consensus 569 ~spdg~~l~sg~~Dg------------~i~iwd~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~--------- 622 (694)
T 3dm0_A 569 VSPDGSLCASGGKDG------------VVLLWDLAEGKKLYS-----LEANSVIHALCFSPNRYWLCAATE--------- 622 (694)
T ss_dssp ECTTSSEEEEEETTS------------BCEEEETTTTEEEEC-----CBCSSCEEEEEECSSSSEEEEEET---------
T ss_pred EeCCCCEEEEEeCCC------------eEEEEECCCCceEEE-----ecCCCcEEEEEEcCCCcEEEEEcC---------
Confidence 22 567777777542 344466666542221 111122334444433334444422
Q ss_pred ceeCcEEEEEcCCCeEE
Q 010034 264 IYYNDTIILDRLSAQWK 280 (519)
Q Consensus 264 ~~~~~v~~yd~~t~~W~ 280 (519)
+.+.++|+.+..-.
T Consensus 623 ---~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 623 ---HGIKIWDLESKSIV 636 (694)
T ss_dssp ---TEEEEEETTTTEEE
T ss_pred ---CCEEEEECCCCCCh
Confidence 34788888776543
No 191
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.43 E-value=22 Score=33.54 Aligned_cols=117 Identities=9% Similarity=0.033 Sum_probs=68.0
Q ss_pred CCcceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccC
Q 010034 19 PRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFG 97 (519)
Q Consensus 19 ~R~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~ 97 (519)
....+..+...++.||+.--. ...++++|+.... ...... + ..-+.+++. ++++|+......
T Consensus 31 ~~~pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~-~~~~~~---------~--~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHE-----VGEIVSITPDGNQ-QIHATV---------E--GKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETT-----TTEEEEECTTCCE-EEEEEC---------S--SEEEEEEECTTSCEEEEEECTT
T ss_pred CCCcceEEECCCCCEEEEeCC-----CCeEEEECCCCce-EEEEeC---------C--CCceeEEEcCCCcEEEEeccCC
Confidence 344455555455678887532 2458999987642 222111 1 123444443 568888753211
Q ss_pred CcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 98 SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 98 ~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
. ..++++|+.+++.+.+.. .+..+.....+...++.+|+.-- ....+|++|+.+.
T Consensus 94 ~---~~v~~~d~~~g~~~~~~~---~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 94 S---IPVVSLVKSDGTVETLLT---LPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQP 148 (306)
T ss_dssp S---CEEEEEECTTSCEEEEEE---CTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTT
T ss_pred c---ceEEEEcCCCCeEEEEEe---CCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCC
Confidence 1 248899999988877763 44455555555555557787642 1246999998865
No 192
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=86.33 E-value=19 Score=32.56 Aligned_cols=154 Identities=14% Similarity=0.252 Sum_probs=78.6
Q ss_pred eEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEee---CCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcE
Q 010034 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTS---FGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDV 155 (519)
Q Consensus 80 h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~---~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v 155 (519)
-+++..++++|+|=| +-+|+++.....+..... -..+|... . ++.... ++++|+|=| +.+
T Consensus 27 DAi~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~i-D-Aa~~~~~~~~iyfFkG-------~~~ 90 (207)
T 1pex_A 27 DAITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPNRI-D-AAYEHPSHDLIFIFRG-------RKF 90 (207)
T ss_dssp SEEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCSSC-C-EEEEETTTTEEEEEET-------TEE
T ss_pred eEEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCCCc-c-EEEEeccCCcEEEEcc-------CEE
Confidence 345567999999966 347888765544332221 11355332 1 222232 579999976 336
Q ss_pred EEEECCCCcE---EEeccCCCCCCc--ccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEE-----
Q 010034 156 YVLDTISLEW---MQLPVTGSVPPP--RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ----- 224 (519)
Q Consensus 156 ~~yd~~t~~W---~~l~~~~~~p~~--r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~----- 224 (519)
|+|+-.+..- ..|..- -+|.. ....+.... ++++|+|-| +..++||..+++-..
T Consensus 91 w~~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~gk~yfFkG--------------~~ywr~d~~~~~~d~gyPr~ 155 (207)
T 1pex_A 91 WALNGYDILEGYPKKISEL-GLPKEVKKISAAVHFEDTGKTLLFSG--------------NQVWRYDDTNHIMDKDYPRL 155 (207)
T ss_dssp EEESTTCCCTTCSEESTTT-TCCTTCCCCCEEEECTTTSEEEEEET--------------TEEEEEETTTTEECSSCCCB
T ss_pred EEEeCCeeccCCceecccc-CCCCCCccccEEEEeCCCCEEEEEeC--------------CEEEEEeCcCccccCCCCcc
Confidence 7776332110 122200 12321 233332222 479999976 223445554432110
Q ss_pred ec--CCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEE
Q 010034 225 LK--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (519)
Q Consensus 225 i~--~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~ 281 (519)
+. -+ .+|. ... ++...++++|+|-| +..|+||..+.+-..
T Consensus 156 i~~~~~-Gip~-~iD-aAf~~~g~~YfFkg--------------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 156 IEEDFP-GIGD-KVD-AVYEKNGYIYFFNG--------------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp HHHHST-TSCS-CCS-EEEEETTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred HHHcCC-CCCC-Ccc-EEEEcCCcEEEEEC--------------CEEEEEeCCccEEec
Confidence 10 01 1232 222 44456899999987 457999987766443
No 193
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.21 E-value=27 Score=34.22 Aligned_cols=143 Identities=13% Similarity=0.060 Sum_probs=69.4
Q ss_pred EEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccc
Q 010034 133 SAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKG 211 (519)
Q Consensus 133 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~ 211 (519)
+.-.+++.++.|+.++ .+..||+.+.+-...- .+ ....-.++... ++..++.|+.+ ..
T Consensus 130 ~~s~dg~~l~s~~~d~-----~i~iwd~~~~~~~~~~-~~---h~~~v~~~~~~p~~~~l~s~s~d------------~~ 188 (393)
T 1erj_A 130 CFSPDGKFLATGAEDR-----LIRIWDIENRKIVMIL-QG---HEQDIYSLDYFPSGDKLVSGSGD------------RT 188 (393)
T ss_dssp EECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE-CC---CSSCEEEEEECTTSSEEEEEETT------------SE
T ss_pred EECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEE-cc---CCCCEEEEEEcCCCCEEEEecCC------------Cc
Confidence 3335667778887664 4889999887654432 11 11111223333 45555666543 23
Q ss_pred cccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEE-cccCCCC
Q 010034 212 LIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEP 288 (519)
Q Consensus 212 v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-v~~~~~~ 288 (519)
+..+|+.+++....- ..... -.+++. .++.+++.|+.+ ..+.+||+.+..-.. +......
T Consensus 189 v~iwd~~~~~~~~~~---~~~~~--v~~~~~~~~~~~~l~~~s~d------------~~v~iwd~~~~~~~~~~~~~~~~ 251 (393)
T 1erj_A 189 VRIWDLRTGQCSLTL---SIEDG--VTTVAVSPGDGKYIAAGSLD------------RAVRVWDSETGFLVERLDSENES 251 (393)
T ss_dssp EEEEETTTTEEEEEE---ECSSC--EEEEEECSTTCCEEEEEETT------------SCEEEEETTTCCEEEEEC-----
T ss_pred EEEEECCCCeeEEEE---EcCCC--cEEEEEECCCCCEEEEEcCC------------CcEEEEECCCCcEEEeecccccC
Confidence 445677766544332 11111 112222 256777777654 347888987765432 2111000
Q ss_pred -CC-CCcceEEEEe-CCEEEEEccCCCC
Q 010034 289 -PP-ARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 289 -p~-~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
.. ...-.+++.. ++++++.|+.++.
T Consensus 252 ~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 252 GTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 00 1111222222 5677788876653
No 194
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=86.16 E-value=23 Score=33.54 Aligned_cols=232 Identities=10% Similarity=-0.038 Sum_probs=112.6
Q ss_pred CcEEEEEcCCCcEEeeeecCCCC-----CCC---C-CCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEECCCCeE
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGS-----NGQ---V-GPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQW 114 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~-----~~~---~-~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd~~t~~W 114 (519)
..+++||+.+..+.......... ++. . .+....-+++++. +++|||.-.. ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 46889999887776654211000 000 0 0000112445555 5789987322 2388999887766
Q ss_pred EEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCC------------CcCCCcEEEEECCCCcEEEeccCCCCCCcccCe
Q 010034 115 SELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDG------------KKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (519)
Q Consensus 115 ~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~------------~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~ 181 (519)
+.+...........-..+++.. ++.||+.-.... ......+++||+.+.+.+.+.. .+ ....
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~---~~p~ 188 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--EL---HVPG 188 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--EE---SCCC
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc--CC---ccCc
Confidence 6554210100111123344555 678998642210 0122569999998887665431 11 1112
Q ss_pred eEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCC---CceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccCC
Q 010034 182 TATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENET---PGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGT 255 (519)
Q Consensus 182 ~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t---~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~~ 255 (519)
.++.. + +.|||.-.. -+.+.+|++.. ...+... ..+. -..+++ .++.|||......
T Consensus 189 gia~~~dg~~lyv~d~~------------~~~I~~~~~~~~~~~~~~~~~---~~~g---P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFL------------SHQIVKYWLEGPKKGTAEVLV---KIPN---PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp EEEECTTSSEEEEEEGG------------GTEEEEEESSSTTTTCEEEEE---ECSS---EEEEEECTTSCEEEEEEEET
T ss_pred ceEECCCCCEEEEEeCC------------CCeEEEEECCCCcCCccceEE---eCCC---CCCeEECCCCCEEEEecCcc
Confidence 33333 3 358876321 13455666654 2344333 1221 223343 4567888754211
Q ss_pred CCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEcc
Q 010034 256 GGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (519)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG 309 (519)
... . .....+.+++||+....-..+......+ .....+++.-+++|||.+-
T Consensus 251 ~~~-~-~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 251 DGN-M-HGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp TSS-T-TSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEEECS
T ss_pred ccc-c-cCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEEeec
Confidence 000 0 0001356899999766555554321111 1223344456889998753
No 195
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=86.06 E-value=30 Score=34.61 Aligned_cols=215 Identities=14% Similarity=0.125 Sum_probs=116.9
Q ss_pred EEEEE--cCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEE-EEC-----CCC-eEEEEe
Q 010034 48 VVVYD--IDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV-LDT-----DIW-QWSELT 118 (519)
Q Consensus 48 ~~~yd--~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~-yd~-----~t~-~W~~~~ 118 (519)
-|.+- +..+.|+.-... ..|....-|+.|.+++.-|.+|=.+++..-..+-. |-+ ... .=+.++
T Consensus 260 ~W~~~T~F~~spW~~t~L~-------~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~ 332 (670)
T 3ju4_A 260 NWHMGTSFHKSPWRKTDLG-------LIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIP 332 (670)
T ss_dssp EEEEEECSTTSCCEEEECC-------SCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECC
T ss_pred eeeeeeeeccCCceecccc-------cccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeech
Confidence 44443 345677665533 34566678999999998899986666544344322 211 111 122232
Q ss_pred eCCCCCCCCCcc-EEEEECCcEEEEEe-cCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEccc
Q 010034 119 SFGDLPSPRDFA-AASAIGNRKIVMYG-GWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGR 196 (519)
Q Consensus 119 ~~g~~P~~r~~~-~~~~~~~~~iyv~G-G~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 196 (519)
. . ..+... -|+-.-++.+|+.- |..+...-+.+.+-+..-..|+.+.... ..-....-.+.+++.||+||-.
T Consensus 333 s--e--y~~~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~--nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 333 S--E--YEPDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPH--NVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp G--G--GCTTEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTT--CCCSSCCCEEEETTEEEEEEEC
T ss_pred h--h--hccccccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccc--cccccCCCcceeCCEEEEEecc
Confidence 1 1 112111 22334466999885 5556677788999999899999997321 1112233456679999999975
Q ss_pred CCCCC----cccc--------cccc-cccccccCCCCceEEecC---CCCCCCCcceeEEE-EeCCE-EEEEeccCCCCC
Q 010034 197 GGGGP----IMGD--------LWAL-KGLIEEENETPGWTQLKL---PGQAPSSRCGHTIT-SGGHY-LLLFGGHGTGGW 258 (519)
Q Consensus 197 ~~~~~----~~~d--------~~~l-~~v~~Yd~~t~~W~~i~~---~g~~P~~r~~~s~~-~~~~~-iyv~GG~~~~~~ 258 (519)
...+. ..++ .+.+ -.+-....+.-+|..+.. .|..-..-.+...+ +.++. .|+|||.+.-+.
T Consensus 407 RA~nEWE~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np 486 (670)
T 3ju4_A 407 RAENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNP 486 (670)
T ss_dssp SSTTCSSTTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCC
T ss_pred ccccccccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCc
Confidence 43211 0011 0110 122334456667877753 24444444555444 45664 568888643211
Q ss_pred ----------cccccceeCcEEEEEcC
Q 010034 259 ----------LSRYDIYYNDTIILDRL 275 (519)
Q Consensus 259 ----------~~~~~~~~~~v~~yd~~ 275 (519)
....+..-.++|+|.+.
T Consensus 487 ~s~gdN~~k~~~~~~Ghp~dlY~~ri~ 513 (670)
T 3ju4_A 487 WTYGDNSAKDPFKSDGHPSDLYCYKMK 513 (670)
T ss_dssp CTTTTTTTCCTTSTTCCCCEEEEEEEE
T ss_pred cccccccccCccccCCCCcceEEEEEE
Confidence 11123355678888754
No 196
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=85.77 E-value=23 Score=33.16 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=52.3
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcC-CCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDID-NKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
++.||+... -..+++||+. ...|.... +.+ ...+.+.. ++.||+.. .. ..++.|
T Consensus 107 ~~~l~v~t~------~~~l~~~d~~g~~~~~~~~-----------~~~-~~~~~~~~~~g~l~vgt-~~-----~~l~~~ 162 (330)
T 3hxj_A 107 EDILYVTSM------DGHLYAINTDGTEKWRFKT-----------KKA-IYATPIVSEDGTIYVGS-ND-----NYLYAI 162 (330)
T ss_dssp TTEEEEECT------TSEEEEECTTSCEEEEEEC-----------SSC-CCSCCEECTTSCEEEEC-TT-----SEEEEE
T ss_pred CCEEEEEec------CCEEEEEcCCCCEEEEEcC-----------CCc-eeeeeEEcCCCEEEEEc-CC-----CEEEEE
Confidence 467777432 1358889987 33565532 111 11222344 56777642 21 358999
Q ss_pred ECCCC-eEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC-CcEEEe
Q 010034 108 DTDIW-QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS-LEWMQL 168 (519)
Q Consensus 108 d~~t~-~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t-~~W~~l 168 (519)
|+... .|.... +... ..+.+...++.||+.. ..+++||... ..|+..
T Consensus 163 d~~g~~~~~~~~-----~~~~-~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~ 211 (330)
T 3hxj_A 163 NPDGTEKWRFKT-----NDAI-TSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFY 211 (330)
T ss_dssp CTTSCEEEEEEC-----SSCC-CSCCEECTTCCEEEES--------SSEEEECTTSCEEEEEC
T ss_pred CCCCCEeEEEec-----CCCc-eeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEc
Confidence 99822 354432 1111 2233443566777653 4589999432 246543
No 197
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=85.76 E-value=19 Score=33.93 Aligned_cols=181 Identities=10% Similarity=0.070 Sum_probs=85.5
Q ss_pred eEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECC---cEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 88 HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN---RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 88 ~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~---~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
++++.|+... .-..+.+||..+++...... ......-.+++...+ +.+++.|+.++. +..||+.+.+
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~ 101 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLRE---IEKAKPIKCGTFGATSLQQRYLATGDFGGN-----LHIWNLEAPE 101 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEE---EEESSCEEEEECTTCCTTTCCEEEEETTSC-----EEEECTTSCS
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceee---ecccCcEEEEEEcCCCCCCceEEEecCCCe-----EEEEeCCCCC
Confidence 5666665421 01358899998887655432 111111122222233 477777776543 8888888765
Q ss_pred --EEEeccCCCCCCcccCeeEEE-------eCCEEEEEcccCCCCCcccccccccccccccCCCCc--eEEecCCCCCCC
Q 010034 165 --WMQLPVTGSVPPPRCGHTATM-------VEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLKLPGQAPS 233 (519)
Q Consensus 165 --W~~l~~~~~~p~~r~~~~~~~-------~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~--W~~i~~~g~~P~ 233 (519)
-..+. ....+. .++.. -++..++.|+.++ .+..||+.+.. ...+..... ..
T Consensus 102 ~~~~~~~---~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d~------------~i~vwd~~~~~~~~~~~~~~~~-~~ 163 (357)
T 3i2n_A 102 MPVYSVK---GHKEII--NAIDGIGGLGIGEGAPEIVTGSRDG------------TVKVWDPRQKDDPVANMEPVQG-EN 163 (357)
T ss_dssp SCSEEEC---CCSSCE--EEEEEESGGGCC-CCCEEEEEETTS------------CEEEECTTSCSSCSEEECCCTT-SC
T ss_pred ccEEEEE---ecccce--EEEeeccccccCCCccEEEEEeCCC------------eEEEEeCCCCCCcceeccccCC-CC
Confidence 22222 111111 11111 2455666666432 34456666543 333331100 01
Q ss_pred CcceeEEE-----EeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe----CCEE
Q 010034 234 SRCGHTIT-----SGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL----GSLY 304 (519)
Q Consensus 234 ~r~~~s~~-----~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~----~~~i 304 (519)
.+.-.+++ ..++.+++.|+.+ ..+.+||+.+..-...... ...-.++... ++..
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~ 226 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAGYDN------------GDIKLFDLRNMALRWETNI-----KNGVCSLEFDRKDISMNK 226 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEEETT------------SEEEEEETTTTEEEEEEEC-----SSCEEEEEESCSSSSCCE
T ss_pred CCceEEEEEEeccCCCCCEEEEEccC------------CeEEEEECccCceeeecCC-----CCceEEEEcCCCCCCCCE
Confidence 11122222 1355666666533 4588999887764333222 1222333333 4677
Q ss_pred EEEccCCCC
Q 010034 305 LLFGGFDGK 313 (519)
Q Consensus 305 yv~GG~~~~ 313 (519)
++.|+.++.
T Consensus 227 l~~~~~dg~ 235 (357)
T 3i2n_A 227 LVATSLEGK 235 (357)
T ss_dssp EEEEESTTE
T ss_pred EEEECCCCe
Confidence 777776653
No 198
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=85.74 E-value=23 Score=38.17 Aligned_cols=124 Identities=14% Similarity=0.105 Sum_probs=66.6
Q ss_pred EEeCCeEEEEccccCCcCCCcEEEEECCCC--eEEEEeeCCCC--CC---CCCccEEEEECCcEEEEEecCCCCcCCCcE
Q 010034 83 VAIDCHMFIFGGRFGSRRLGDFWVLDTDIW--QWSELTSFGDL--PS---PRDFAAASAIGNRKIVMYGGWDGKKWLSDV 155 (519)
Q Consensus 83 ~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~--~W~~~~~~g~~--P~---~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v 155 (519)
++.++.||+.+.. +.++.+|..|+ .|+.-...... +. .....+.++. +++||+... + ..+
T Consensus 67 ~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~-d-----g~l 133 (689)
T 1yiq_A 67 IVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGVL-D-----GRL 133 (689)
T ss_dssp EEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECT-T-----SEE
T ss_pred EEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-CCEEEEEcc-C-----CEE
Confidence 4678999987652 35999999876 48764311000 00 0011122333 558887542 2 358
Q ss_pred EEEECCCCc--EEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCc--eEEec
Q 010034 156 YVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLK 226 (519)
Q Consensus 156 ~~yd~~t~~--W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~--W~~i~ 226 (519)
+.+|..|.+ |+.-.............+-++.++.+|+-.+....+ .-..+..||..+++ |+.-.
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~-------~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG-------VRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC-------CBCEEEEEETTTCCEEEEEES
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC-------CCCEEEEEECCCCcEEEEecc
Confidence 999998875 887542011111122233455688887743221111 01346677888775 87654
No 199
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=85.72 E-value=24 Score=33.30 Aligned_cols=107 Identities=9% Similarity=0.012 Sum_probs=59.4
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
+.+++.|+.+ ..+.+||+.+.+-...-. .... .-.+++.. ++.+++.|+.++ .+.+||
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~---------~~~~-~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd 144 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYV---------GHGN-AINELKFHPRDPNLLLSVSKDH-----ALRLWN 144 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEE---------SCCS-CEEEEEECSSCTTEEEEEETTS-----CEEEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeec---------CCCC-cEEEEEECCCCCCEEEEEeCCC-----eEEEEE
Confidence 4677777654 358889988765322211 0111 12233332 567778877654 489999
Q ss_pred CCCCeEEEEeeCCCCCC-CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 109 TDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 109 ~~t~~W~~~~~~g~~P~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+.+.+-..... .+.. ...-.+++...++..++.|+.++ .+..||+.+.+
T Consensus 145 ~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 194 (366)
T 3k26_A 145 IQTDTLVAIFG--GVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRINSKR 194 (366)
T ss_dssp TTTTEEEEEEC--STTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESCSHH
T ss_pred eecCeEEEEec--ccccccCceeEEEECCCCCEEEEecCCC-----CEEEEECCCCc
Confidence 99876544321 1111 11222333335556777777654 38888887653
No 200
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.72 E-value=25 Score=33.44 Aligned_cols=155 Identities=7% Similarity=0.043 Sum_probs=71.9
Q ss_pred EEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEEECCC
Q 010034 33 VVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDI 111 (519)
Q Consensus 33 lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~yd~~t 111 (519)
+++.||.+ ..+.+||+.++.+..+..... ......-.+++.. ++.+++.|+.++ .+.++|...
T Consensus 26 ~las~~~D-----~~i~lw~~~~~~~~~~~~~~~------~~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~ 89 (330)
T 2hes_X 26 ILATGSTD-----RKIKLVSVKYDDFTLIDVLDE------TAHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEE 89 (330)
T ss_dssp EEEEEESS-----SCEEEEECSSSCCEEEEEECT------TCCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC--
T ss_pred EEEEEcCC-----CEEEEEEecCCCeEEEEEEec------CCccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEccc
Confidence 66666643 457888988766554432210 0011111222222 567777777654 467777743
Q ss_pred C-----eEEEEeeCCCCCCC-CCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC--CcEEEeccCCCCCCcccCeeE
Q 010034 112 W-----QWSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS--LEWMQLPVTGSVPPPRCGHTA 183 (519)
Q Consensus 112 ~-----~W~~~~~~g~~P~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t--~~W~~l~~~~~~p~~r~~~~~ 183 (519)
. .+..+.. +... ..-.+++.-.+++.++.|+.++. +..+|+.. ..++.+. .+.........
T Consensus 90 ~~~~~~~~~~~~~---~~~h~~~V~~v~~sp~g~~las~s~D~~-----v~iwd~~~~~~~~~~~~---~~~~h~~~v~~ 158 (330)
T 2hes_X 90 SADRTFEMDLLAI---IEGHENEVKGVAWSNDGYYLATCSRDKS-----VWIWETDESGEEYECIS---VLQEHSQDVKH 158 (330)
T ss_dssp -----CCCEEEEE---EC----CEEEEEECTTSCEEEEEETTSC-----EEEEECCTTCCCCEEEE---EECCCSSCEEE
T ss_pred CcCccccceeEEE---EcCCCCcEEEEEECCCCCEEEEEeCCCE-----EEEEeccCCCCCeEEEE---EeccCCCceEE
Confidence 2 2222221 1111 11122233355677778876653 78888743 3344433 11111111222
Q ss_pred EEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEec
Q 010034 184 TMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (519)
Q Consensus 184 ~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~ 226 (519)
+.. ++.+++.|+.+. .+..+|..+..|..+.
T Consensus 159 v~~~p~~~~l~s~s~D~------------~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 159 VIWHPSEALLASSSYDD------------TVRIWKDYDDDWECVA 191 (330)
T ss_dssp EEECSSSSEEEEEETTS------------CEEEEEEETTEEEEEE
T ss_pred EEECCCCCEEEEEcCCC------------eEEEEECCCCCeeEEE
Confidence 222 456677776542 2334555566665543
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=85.64 E-value=42 Score=35.98 Aligned_cols=148 Identities=8% Similarity=-0.054 Sum_probs=81.2
Q ss_pred CcEEEEECCCC--eEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC---cEEEeccCCCCCC
Q 010034 102 GDFWVLDTDIW--QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL---EWMQLPVTGSVPP 176 (519)
Q Consensus 102 ~dv~~yd~~t~--~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~---~W~~l~~~~~~p~ 176 (519)
+++|++|..+. .|..+.. +... ........++.+|+....+. ....++.+|+.+. .|+.+.+. ..
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~----~~~~-~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~---~~ 328 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG----DLDA-DVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPE---RQ 328 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC----SSSS-CEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECC---CS
T ss_pred cEEEEEECCCCCCceEEEeC----CCCc-eEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecC---CC
Confidence 68999998766 7888762 2222 12223333458998876543 2456899998864 48887632 11
Q ss_pred cccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEE-ecc
Q 010034 177 PRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLF-GGH 253 (519)
Q Consensus 177 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~-GG~ 253 (519)
... .....++.|++..-... ...+..+|++......+. .|.......... .++.+++. .+.
T Consensus 329 ~~~--~~s~~g~~lv~~~~~~g----------~~~l~~~d~~g~~~~~l~----~p~~~~~~~~~~~~d~~~l~~~~ss~ 392 (693)
T 3iuj_A 329 QVL--TVHSGSGYLFAEYMVDA----------TARVEQFDYEGKRVREVA----LPGLGSVSGFNGKHDDPALYFGFENY 392 (693)
T ss_dssp SCE--EEEEETTEEEEEEEETT----------EEEEEEECTTSCEEEEEC----CSSSSEEEECCCCTTCSCEEEEEECS
T ss_pred CEE--EEEEECCEEEEEEEECC----------eeEEEEEECCCCeeEEee----cCCCceEEeeecCCCCCEEEEEecCC
Confidence 111 34444667766543221 245666788766656554 232221111111 22334333 222
Q ss_pred CCCCCcccccceeCcEEEEEcCCCeEEEcccC
Q 010034 254 GTGGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (519)
Q Consensus 254 ~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~ 285 (519)
. --..++.||+.+.+++.+...
T Consensus 393 ~----------tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 393 A----------QPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp S----------SCCEEEEECTTTCCEEEEECC
T ss_pred C----------CCCEEEEEECCCCeEEEEEeC
Confidence 2 125789999988888777654
No 202
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=85.19 E-value=27 Score=33.30 Aligned_cols=167 Identities=8% Similarity=-0.033 Sum_probs=86.8
Q ss_pred EEEEe--CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC----CCCCC-ccEEEEECC-cEEEEEecCCCCcCC
Q 010034 81 IAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL----PSPRD-FAAASAIGN-RKIVMYGGWDGKKWL 152 (519)
Q Consensus 81 ~~~~~--~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~----P~~r~-~~~~~~~~~-~~iyv~GG~~~~~~~ 152 (519)
.+++. +++||+..++.. +.+.+||+....-..+...+.. +.... -+++++..+ +.|||....+
T Consensus 147 ~ia~~~~~g~lyv~d~~~~----~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~----- 217 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCN----SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN----- 217 (329)
T ss_dssp EEEECTTTCCEEEEECSSC----CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-----
T ss_pred EEEEeCCCCeEEEEeCCCC----CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-----
Confidence 34444 578999975321 4588999665544444322211 11111 234444444 7999987533
Q ss_pred CcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCC
Q 010034 153 SDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP 232 (519)
Q Consensus 153 ~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P 232 (519)
+.+.+||+.+.+....-... .....-..++...+.+|+..|...-... .-..+..+|+.+++....-..+ ..
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~pg~~~~~~g~~~v~~~-----~~~~v~~~~~~~g~~~~~~~~~-~~ 289 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHA--SFGRNVFAISYIPGFLFAVNGKPYFGDQ-----EPVQGFVMNFSSGEIIDVFKPV-RK 289 (329)
T ss_dssp TEEEEEETTTCCEEEEECCT--TTTTCEEEEEEETTEEEEEECCCCTTCS-----CCCCEEEEETTTCCEEEEECCS-SS
T ss_pred CEEEEEECCCCcEEEEEecc--ccCCCcceeeecCCEEEEeCCCEEeccC-----CCcEEEEEEcCCCeEEEEEcCC-CC
Confidence 45899999977765543111 1111112334445777777664221100 1135666787777766543111 11
Q ss_pred CCcceeEEEE-eCCEEEEEeccCCCCCcccccceeCcEEEEEcCC
Q 010034 233 SSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (519)
Q Consensus 233 ~~r~~~s~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t 276 (519)
....-.++++ -++.+||.... .+.|++|+++.
T Consensus 290 ~~~~p~~ia~~~dG~lyvad~~------------~~~I~~~~~~~ 322 (329)
T 3fvz_A 290 HFDMPHDIVASEDGTVYIGDAH------------TNTVWKFTLTE 322 (329)
T ss_dssp CCSSEEEEEECTTSEEEEEESS------------SCCEEEEEEEE
T ss_pred ccCCeeEEEECCCCCEEEEECC------------CCEEEEEeCCc
Confidence 1122234444 45688887643 25688888653
No 203
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=85.14 E-value=43 Score=35.66 Aligned_cols=149 Identities=9% Similarity=0.012 Sum_probs=73.2
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++++++.|+.++ .+.++|+.++.-...-. .+.. .-.+++...++..++.|+.++. +.++|.....-
T Consensus 441 ~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~~---~h~~-~v~~~~~s~~~~~l~s~s~D~~-----i~iwd~~~~~~ 506 (694)
T 3dm0_A 441 DGQFALSGSWDG-----ELRLWDLAAGVSTRRFV---GHTK-DVLSVAFSLDNRQIVSASRDRT-----IKLWNTLGECK 506 (694)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCSS-CEEEEEECTTSSCEEEEETTSC-----EEEECTTSCEE
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcceeEEe---CCCC-CEEEEEEeCCCCEEEEEeCCCE-----EEEEECCCCcc
Confidence 567777777654 58899998876443221 1111 1223333345567777776643 77777655433
Q ss_pred EEeccCCCCCCcccCeeEEEe--CC--EEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEE
Q 010034 166 MQLPVTGSVPPPRCGHTATMV--EK--RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~--~~--~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~ 241 (519)
..+.. .....+....++.+ ++ .+++.|+.+ ..+..+|+.+.+-...- ....... .+++
T Consensus 507 ~~~~~--~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------------~~v~vwd~~~~~~~~~~---~~h~~~v-~~v~ 568 (694)
T 3dm0_A 507 YTISE--GGEGHRDWVSCVRFSPNTLQPTIVSASWD------------KTVKVWNLSNCKLRSTL---AGHTGYV-STVA 568 (694)
T ss_dssp EEECS--STTSCSSCEEEEEECSCSSSCEEEEEETT------------SCEEEEETTTCCEEEEE---CCCSSCE-EEEE
T ss_pred eeecc--CCCCCCCcEEEEEEeCCCCcceEEEEeCC------------CeEEEEECCCCcEEEEE---cCCCCCE-EEEE
Confidence 33321 11111111222222 22 355566543 23445676665443322 0111111 2223
Q ss_pred E-eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCe
Q 010034 242 S-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (519)
Q Consensus 242 ~-~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~ 278 (519)
. .++.+++.|+.+ ..|.++|+.+.+
T Consensus 569 ~spdg~~l~sg~~D------------g~i~iwd~~~~~ 594 (694)
T 3dm0_A 569 VSPDGSLCASGGKD------------GVVLLWDLAEGK 594 (694)
T ss_dssp ECTTSSEEEEEETT------------SBCEEEETTTTE
T ss_pred EeCCCCEEEEEeCC------------CeEEEEECCCCc
Confidence 3 456677777644 346788887765
No 204
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.04 E-value=18 Score=37.64 Aligned_cols=111 Identities=11% Similarity=-0.027 Sum_probs=60.4
Q ss_pred eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
.++.+++..+..+ .+.+||+.+++-..+.. .+. .+.+.-.+|+..++++.+... ...++++|+.+.+
T Consensus 120 dg~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~---~~~----~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 120 TGEAVVFTGATED-----RVALYALDGGGLRELAR---LPG----FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGG 186 (582)
T ss_dssp CSSCEEEEEECSS-----CEEEEEEETTEEEEEEE---ESS----CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCC
T ss_pred CCCeEEEEecCCC-----CceEEEccCCcEEEeec---CCC----ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCC
Confidence 3445655544332 24478999988877763 222 333333345555555443221 2459999999999
Q ss_pred EEEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceE
Q 010034 165 WMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT 223 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~ 223 (519)
++.+. ..+... ...+.. +++.++.+...+ ...++.+|+++++..
T Consensus 187 ~~~l~---~~~~~~--~~~~~SpDG~~l~~~~~~~----------~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 187 LRVFD---SGEGSF--SSASISPGMKVTAGLETAR----------EARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEC---CSSCEE--EEEEECTTSCEEEEEECSS----------CEEEEEECTTTCCEE
T ss_pred ceEee---cCCCcc--ccceECCCCCEEEEccCCC----------eeEEEEEcCCCCcEE
Confidence 98875 222111 222222 554444332211 135677899888887
No 205
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=84.96 E-value=25 Score=32.79 Aligned_cols=64 Identities=11% Similarity=0.115 Sum_probs=34.2
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-C--CeEEEEccccCCcCCCcEEEE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D--CHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~--~~iyv~GG~~~~~~~~dv~~y 107 (519)
+.+++.|+.+ ..+.++|+.+++|..+.... .... .-.+++.. + +.+++.|+.++ .+.++
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~-------~h~~-~v~~v~~~p~~~g~~l~s~s~d~-----~v~~w 128 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHA-------VHSA-SVNSVQWAPHEYGPMLLVASSDG-----KVSVV 128 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEEC-------CCSS-CEEEEEECCGGGCSEEEEEETTS-----EEEEE
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEee-------cCCC-ceeEEEeCcCCCCcEEEEEECCC-----cEEEE
Confidence 4566666644 34778888887776543221 0111 11222222 2 45667776553 46777
Q ss_pred ECCCC
Q 010034 108 DTDIW 112 (519)
Q Consensus 108 d~~t~ 112 (519)
|+.+.
T Consensus 129 d~~~~ 133 (297)
T 2pm7_B 129 EFKEN 133 (297)
T ss_dssp EBCSS
T ss_pred EecCC
Confidence 77654
No 206
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=84.93 E-value=30 Score=33.68 Aligned_cols=189 Identities=9% Similarity=-0.010 Sum_probs=90.3
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEE-eeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWF-QPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
++.+++.|+.+ ..+.+||+.+.+-. .+. .... .-.+++.. +++.++.|+.++ .+.++
T Consensus 150 ~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~----------~h~~-~v~~~~~~~~~~~l~s~~~d~-----~v~iw 208 (420)
T 3vl1_A 150 SGEALISSSQD-----MQLKIWSVKDGSNPRTLI----------GHRA-TVTDIAIIDRGRNVLSASLDG-----TIRLW 208 (420)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCCCEEEE----------CCSS-CEEEEEEETTTTEEEEEETTS-----CEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCcCceEEc----------CCCC-cEEEEEEcCCCCEEEEEcCCC-----cEEEe
Confidence 34555555543 35788888765421 111 0111 12223333 566677777554 48899
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEE---------------------ECCcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASA---------------------IGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~---------------------~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
|+.+.+-...-.....+... -.+++. -.++..++.|+.++. +..||+.+.+-.
T Consensus 209 d~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-----i~i~d~~~~~~~ 282 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDG-VNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-----ITVHNVFSKEQT 282 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCC-EEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-----EEEEETTTCCEE
T ss_pred ECCCCceeEEeecCCCCCCC-ccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-----EEEEECCCCcee
Confidence 99887644332110001110 011111 135577777776543 889999887643
Q ss_pred EeccCCCCCCcccCeeEEEe-CCE-EEEEcccCCCCCcccccccccccccccCCCCc--eEEecCCCCCCCCcceeEEEE
Q 010034 167 QLPVTGSVPPPRCGHTATMV-EKR-LLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLKLPGQAPSSRCGHTITS 242 (519)
Q Consensus 167 ~l~~~~~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~--W~~i~~~g~~P~~r~~~s~~~ 242 (519)
... .......-.+++.. ++. +++.|+.+ ..+..||..+.. ...+.. . ....-.++..
T Consensus 283 ~~~---~~~~~~~v~~~~~~~~~~~~l~~g~~d------------g~i~vwd~~~~~~~~~~~~~--~--~~~~v~~~~~ 343 (420)
T 3vl1_A 283 IQL---PSKFTCSCNSLTVDGNNANYIYAGYEN------------GMLAQWDLRSPECPVGEFLI--N--EGTPINNVYF 343 (420)
T ss_dssp EEE---CCTTSSCEEEEEECSSCTTEEEEEETT------------SEEEEEETTCTTSCSEEEEE--S--TTSCEEEEEE
T ss_pred EEc---ccccCCCceeEEEeCCCCCEEEEEeCC------------CeEEEEEcCCCcCchhhhhc--c--CCCCceEEEe
Confidence 332 11111111222333 344 66666643 234556666543 222321 0 1111123344
Q ss_pred eCCEEEEEeccCCCCCcccccceeCcEEEEEcCC
Q 010034 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (519)
Q Consensus 243 ~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t 276 (519)
.++.+++.|+.+ ..+.++|+..
T Consensus 344 ~~~~~l~s~~~d------------~~v~iw~~~~ 365 (420)
T 3vl1_A 344 AAGALFVSSGFD------------TSIKLDIISD 365 (420)
T ss_dssp ETTEEEEEETTT------------EEEEEEEECC
T ss_pred CCCCEEEEecCC------------ccEEEEeccC
Confidence 577777877643 3466777654
No 207
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.33 E-value=27 Score=32.65 Aligned_cols=148 Identities=11% Similarity=0.073 Sum_probs=72.6
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
+++.++.|+.++ .+..++........... . ............++..++.|+.++. +..+|.....-
T Consensus 97 dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~s~s~d~~-----~~~~d~~~~~~ 162 (340)
T 4aow_A 97 DGQFALSGSWDG-----TLRLWDLTTGTTTRRFV---G-HTKDVLSVAFSSDNRQIVSGSRDKT-----IKLWNTLGVCK 162 (340)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEE---C-CSSCEEEEEECTTSSCEEEEETTSC-----EEEECTTSCEE
T ss_pred CCCEEEEEcccc-----cceEEeecccceeeeec---C-CCCceeEEEEeecCccceeecCCCe-----EEEEEeCCCce
Confidence 567777777654 47788888776655542 1 1122222333344456667766543 66777665543
Q ss_pred EEeccCCCCCCcccCeeEEEe----CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEE
Q 010034 166 MQLPVTGSVPPPRCGHTATMV----EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~ 241 (519)
...... ........+.+ .+.+++.||.. ..+..||..+.+....-. ...... .+++
T Consensus 163 ~~~~~~----~~~~~v~~~~~~~~~~~~~~~s~~~d------------~~i~i~d~~~~~~~~~~~---~h~~~v-~~~~ 222 (340)
T 4aow_A 163 YTVQDE----SHSEWVSCVRFSPNSSNPIIVSCGWD------------KLVKVWNLANCKLKTNHI---GHTGYL-NTVT 222 (340)
T ss_dssp EEECSS----SCSSCEEEEEECSCSSSCEEEEEETT------------SCEEEEETTTTEEEEEEC---CCSSCE-EEEE
T ss_pred EEEEec----cccCcccceEEccCCCCcEEEEEcCC------------CEEEEEECCCCceeeEec---CCCCcE-EEEE
Confidence 333211 11111122222 23455555543 224456766665443321 111111 2233
Q ss_pred E-eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeE
Q 010034 242 S-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQW 279 (519)
Q Consensus 242 ~-~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W 279 (519)
. .++.+++.|+.+ ..+.+||+.+..-
T Consensus 223 ~s~~~~~l~s~s~D------------g~i~iwd~~~~~~ 249 (340)
T 4aow_A 223 VSPDGSLCASGGKD------------GQAMLWDLNEGKH 249 (340)
T ss_dssp ECTTSSEEEEEETT------------CEEEEEETTTTEE
T ss_pred ECCCCCEEEEEeCC------------CeEEEEEeccCce
Confidence 3 356677777643 3477888876543
No 208
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=83.80 E-value=27 Score=32.16 Aligned_cols=42 Identities=14% Similarity=0.217 Sum_probs=21.6
Q ss_pred CcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCCC
Q 010034 267 NDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (519)
Q Consensus 267 ~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~~ 313 (519)
..+.+||+.+.+....-.... . .-.++... +++ ++.|+.++.
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~---~-~i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPA---I-SIWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSS---S-CEEEEEECTTSC-EEEEETTSC
T ss_pred CEEEEEECCCCceeEEEeccC---c-eEEEEEEccCCC-EEEEeCCCc
Confidence 458899988776544332211 1 12233333 455 556776553
No 209
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.90 E-value=36 Score=32.35 Aligned_cols=68 Identities=13% Similarity=0.058 Sum_probs=43.7
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
+++.++.|+.++ .+.+||+.+++-..... .+....-.+++...++.+++.|+.++ .+..||+.+.+-
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~---~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDDSQYIVHS---AKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSSCEEEEEC---CCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCTTS
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcEEEEEe---cCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCC
Confidence 456777777554 48899998887644431 22222234455556778888888665 388999988764
Q ss_pred E
Q 010034 166 M 166 (519)
Q Consensus 166 ~ 166 (519)
.
T Consensus 205 ~ 205 (343)
T 3lrv_A 205 A 205 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 210
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=81.74 E-value=33 Score=31.89 Aligned_cols=157 Identities=11% Similarity=0.012 Sum_probs=76.1
Q ss_pred EEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCC-CccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 89 MFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPR-DFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 89 iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r-~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
+++.++.+ +.+.++|+.+.+-...-. .+... .-+.++.-.++ .+|+.++.+ ..++.+|+.+.+-.
T Consensus 3 ~~v~~~~~-----~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 3 YILAPARP-----DKLVVIDTEKMAVDKVIT---IADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETL 69 (337)
T ss_dssp EEEEEETT-----TEEEEEETTTTEEEEEEE---CTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEE
T ss_pred EEEEcCCC-----CeEEEEECCCCcEEEEEE---cCCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeE
Confidence 45555433 358999999886654332 22211 12334444444 677776432 45999999988755
Q ss_pred EeccCCCCCC--cccCeeEEEe-CC-EEEEEcccCCCCC-cccccccccccccccCCCCceEEecCCCCCCCCcceeEEE
Q 010034 167 QLPVTGSVPP--PRCGHTATMV-EK-RLLIYGGRGGGGP-IMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (519)
Q Consensus 167 ~l~~~~~~p~--~r~~~~~~~~-~~-~lyv~GG~~~~~~-~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~ 241 (519)
..-..+. +. ...-+.++.. ++ .+|+......... ... ..-+.+..||+.+.+....-..+..| +.++
T Consensus 70 ~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~--~~~~~i~v~d~~~~~~~~~~~~~~~~-----~~~~ 141 (337)
T 1pby_B 70 GRIDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE--VQPTRVALYDAETLSRRKAFEAPRQI-----TMLA 141 (337)
T ss_dssp EEEECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE--ECCCEEEEEETTTTEEEEEEECCSSC-----CCEE
T ss_pred eeEEcCC-cccccccccceEECCCCCEEEEEeccccccccccc--ccCceEEEEECCCCcEEEEEeCCCCc-----ceeE
Confidence 4221111 00 0011233333 34 6777642110000 000 00145667788877655433111111 2222
Q ss_pred E-eCC-EEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEE
Q 010034 242 S-GGH-YLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (519)
Q Consensus 242 ~-~~~-~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~ 281 (519)
. -++ .+|+.+ +.++++|+.+.+-..
T Consensus 142 ~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 142 WARDGSKLYGLG---------------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp ECTTSSCEEEES---------------SSEEEEETTTTEEEE
T ss_pred ECCCCCEEEEeC---------------CeEEEEECCCCcEee
Confidence 3 333 466541 358999998776543
No 211
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.73 E-value=18 Score=37.67 Aligned_cols=155 Identities=12% Similarity=0.048 Sum_probs=75.4
Q ss_pred CeEEEEccccCCcCCCcEEEEEC--CCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 87 CHMFIFGGRFGSRRLGDFWVLDT--DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 87 ~~iyv~GG~~~~~~~~dv~~yd~--~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+++.+.+...+......+|..++ ....- .+. ..+..+ ..+.....+.+++..+..+ .+.+||+.+.+
T Consensus 75 d~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~---~~~~~~--~~~~s~dg~~~~~~s~~~~-----~~~l~d~~~g~ 143 (582)
T 3o4h_A 75 GRVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE---AVKPMR--ILSGVDTGEAVVFTGATED-----RVALYALDGGG 143 (582)
T ss_dssp SEEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT---TSCSBE--EEEEEECSSCEEEEEECSS-----CEEEEEEETTE
T ss_pred CeEEEEeccCCCCcceEEEEEeccCCCccc-ccc---CCCCce--eeeeCCCCCeEEEEecCCC-----CceEEEccCCc
Confidence 35544443322223345777887 44332 332 122222 2223333324444444322 24477988888
Q ss_pred EEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeC
Q 010034 165 WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGG 244 (519)
Q Consensus 165 W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~ 244 (519)
-+.+. ..+. ......-+++.+++++....+ -..++.+|+.+++++.+. ..+.. ....+..-+
T Consensus 144 ~~~l~---~~~~---~~~~~spDG~~la~~~~~~~~--------~~~i~~~d~~~g~~~~l~---~~~~~-~~~~~~SpD 205 (582)
T 3o4h_A 144 LRELA---RLPG---FGFVSDIRGDLIAGLGFFGGG--------RVSLFTSNLSSGGLRVFD---SGEGS-FSSASISPG 205 (582)
T ss_dssp EEEEE---EESS---CEEEEEEETTEEEEEEEEETT--------EEEEEEEETTTCCCEEEC---CSSCE-EEEEEECTT
T ss_pred EEEee---cCCC---ceEEECCCCCEEEEEEEcCCC--------CeEEEEEcCCCCCceEee---cCCCc-cccceECCC
Confidence 77776 2222 222233356555555443222 133666798899888775 22211 122222345
Q ss_pred CEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEE
Q 010034 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK 280 (519)
Q Consensus 245 ~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 280 (519)
++.++.+...+ ...++++|+++....
T Consensus 206 G~~l~~~~~~~----------~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 206 MKVTAGLETAR----------EARLVTVDPRDGSVE 231 (582)
T ss_dssp SCEEEEEECSS----------CEEEEEECTTTCCEE
T ss_pred CCEEEEccCCC----------eeEEEEEcCCCCcEE
Confidence 55444332211 146899999888777
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=81.47 E-value=38 Score=32.27 Aligned_cols=65 Identities=14% Similarity=0.043 Sum_probs=43.6
Q ss_pred CeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 87 ~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
+.+|+.+... ..+++||+.+++..... .+. .-.+.+...++++++... ..+++||+.+.+.+
T Consensus 61 ~~l~~~d~~~-----~~i~~~d~~~~~~~~~~----~~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 61 GTAWWFNILE-----RELHELHLASGRKTVHA----LPF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLT 122 (326)
T ss_dssp TEEEEEEGGG-----TEEEEEETTTTEEEEEE----CSS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEE
T ss_pred CEEEEEECCC-----CEEEEEECCCCcEEEEE----CCC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEE
Confidence 5777775432 35899999998776654 221 223444445678877641 34999999999988
Q ss_pred Eec
Q 010034 167 QLP 169 (519)
Q Consensus 167 ~l~ 169 (519)
.+.
T Consensus 123 ~~~ 125 (326)
T 2ghs_A 123 LHA 125 (326)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 213
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=80.60 E-value=46 Score=32.67 Aligned_cols=195 Identities=11% Similarity=0.110 Sum_probs=97.0
Q ss_pred eEEEEEC--CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCc-------ceeEEEEe----CCeE
Q 010034 23 HSAVNIG--KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPR-------AFHIAVAI----DCHM 89 (519)
Q Consensus 23 h~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R-------~~h~~~~~----~~~i 89 (519)
++++... ++.||+.+.... .-.-+++.+-...+|+.+..... -+.. ..+ .-.+++.. .+.|
T Consensus 58 ~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~---~~~~-~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 58 HHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPA---FNKA-PEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp EEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCC---CCCC-C----CCCCCEEEEEEECCTTSTTCE
T ss_pred EEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCcccc---CCCc-ccccccccccceeEEEeCCCCCCCEE
Confidence 4444432 567887654210 11247777666778998753210 0000 111 11223333 4577
Q ss_pred EEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCC--------------CCCccEEEEE--CCcEEEEEecCCCCcCCC
Q 010034 90 FIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS--------------PRDFAAASAI--GNRKIVMYGGWDGKKWLS 153 (519)
Q Consensus 90 yv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~--------------~r~~~~~~~~--~~~~iyv~GG~~~~~~~~ 153 (519)
|+.+. . .-+++.+-...+|+.+......|. ....+++++. ..+.||+..+. .
T Consensus 132 ~~g~~-~-----ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------g 199 (394)
T 3b7f_A 132 YAGTS-P-----QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------G 199 (394)
T ss_dssp EEEEE-T-----TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET------B
T ss_pred EEEec-C-----CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC------C
Confidence 76542 1 237777777789998753111121 1122333332 13467776432 2
Q ss_pred cEEEEECCCCcEEEeccC---CCCCCc-----ccCeeEEEeC---CEEEEEcccCCCCCcccccccccccccccCCCCce
Q 010034 154 DVYVLDTISLEWMQLPVT---GSVPPP-----RCGHTATMVE---KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW 222 (519)
Q Consensus 154 ~v~~yd~~t~~W~~l~~~---~~~p~~-----r~~~~~~~~~---~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W 222 (519)
.+++.+-...+|+.+... ..+|.+ ...+.++... +.||+..+ ..+++.+....+|
T Consensus 200 gl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--------------~gl~~s~D~G~tW 265 (394)
T 3b7f_A 200 GVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--------------CGIYRMDRREGVW 265 (394)
T ss_dssp EEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--------------TEEEEEETTTTEE
T ss_pred CEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--------------CeEEEeCCCCCcc
Confidence 378887778899988521 112221 1224444432 57777421 2244456678899
Q ss_pred EEecCCCCCCCC--cceeEEEE---eCCEEEEEe
Q 010034 223 TQLKLPGQAPSS--RCGHTITS---GGHYLLLFG 251 (519)
Q Consensus 223 ~~i~~~g~~P~~--r~~~s~~~---~~~~iyv~G 251 (519)
+.+.. .+|.. ....++.+ ..+.||+..
T Consensus 266 ~~~~~--~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 266 KRIGD--AMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp ECGGG--GSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred eECCC--CCCCCCccceEEEEECCCCCCEEEEEe
Confidence 98862 23431 33344444 346777764
No 214
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=80.42 E-value=20 Score=33.71 Aligned_cols=86 Identities=12% Similarity=0.179 Sum_probs=44.5
Q ss_pred eCCeEEEEccccCCcCCCcEEEEECC-CCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC-
Q 010034 85 IDCHMFIFGGRFGSRRLGDFWVLDTD-IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS- 162 (519)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~dv~~yd~~-t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t- 162 (519)
.++.||+... . ..+++||+. ...|..... .. ...+.+...++.+|+.. . -..++.||+..
T Consensus 106 ~~~~l~v~t~-~-----~~l~~~d~~g~~~~~~~~~-----~~-~~~~~~~~~~g~l~vgt-~-----~~~l~~~d~~g~ 167 (330)
T 3hxj_A 106 FEDILYVTSM-D-----GHLYAINTDGTEKWRFKTK-----KA-IYATPIVSEDGTIYVGS-N-----DNYLYAINPDGT 167 (330)
T ss_dssp ETTEEEEECT-T-----SEEEEECTTSCEEEEEECS-----SC-CCSCCEECTTSCEEEEC-T-----TSEEEEECTTSC
T ss_pred ECCEEEEEec-C-----CEEEEEcCCCCEEEEEcCC-----Cc-eeeeeEEcCCCEEEEEc-C-----CCEEEEECCCCC
Confidence 3788887432 1 358899988 335655431 11 12233444466777643 2 14589999882
Q ss_pred CcEEEeccCCCCCCcccCeeEEE-eCCEEEEEc
Q 010034 163 LEWMQLPVTGSVPPPRCGHTATM-VEKRLLIYG 194 (519)
Q Consensus 163 ~~W~~l~~~~~~p~~r~~~~~~~-~~~~lyv~G 194 (519)
..|..-. +.... .+.+. .++.+|+..
T Consensus 168 ~~~~~~~-----~~~~~-~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 168 EKWRFKT-----NDAIT-SAASIGKDGTIYFGS 194 (330)
T ss_dssp EEEEEEC-----SSCCC-SCCEECTTCCEEEES
T ss_pred EeEEEec-----CCCce-eeeEEcCCCEEEEEe
Confidence 2255432 11221 22333 366777654
No 215
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=79.91 E-value=29 Score=34.41 Aligned_cols=64 Identities=11% Similarity=-0.025 Sum_probs=32.9
Q ss_pred CeEEEEccccCCcCCCcEEEEECCCC--------eEEEEeeCCCCCCCCCccEEEEECCcE-EEEEecCCCCcCCCcEEE
Q 010034 87 CHMFIFGGRFGSRRLGDFWVLDTDIW--------QWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYV 157 (519)
Q Consensus 87 ~~iyv~GG~~~~~~~~dv~~yd~~t~--------~W~~~~~~g~~P~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~ 157 (519)
+.+++.|+.++ .+.+||..+. ....+... ..+ .....+++...++. +++.|+.++. +..
T Consensus 141 ~~~lat~~~dg-----~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~l~~~~~~~~~l~s~~~dg~-----i~v 208 (430)
T 2xyi_A 141 ACVIATKTPSS-----DVLVFDYTKHPSKPEPSGECQPDLRL-RGH-QKEGYGLSWNPNLNGYLLSASDDHT-----ICL 208 (430)
T ss_dssp EEEEEEECSSS-----CEEEEEGGGSCSSCCTTCCCCCSEEE-ECC-SSCCCCEEECTTSTTEEEEECTTSC-----EEE
T ss_pred CcEEEEECCCC-----cEEEEECCCcccccCccccCCCcEEe-cCC-CCCeEEEEeCCCCCCeEEEEeCCCe-----EEE
Confidence 45666666543 4888888652 11111100 011 11123344444444 7777776543 888
Q ss_pred EECCC
Q 010034 158 LDTIS 162 (519)
Q Consensus 158 yd~~t 162 (519)
||+.+
T Consensus 209 wd~~~ 213 (430)
T 2xyi_A 209 WDINA 213 (430)
T ss_dssp EETTS
T ss_pred EeCCC
Confidence 88876
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.77 E-value=51 Score=32.74 Aligned_cols=209 Identities=7% Similarity=-0.031 Sum_probs=106.7
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRL 101 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~ 101 (519)
.++...++.||+.... -+.+.++|+.++.-..+.... . ..+ .++. ++.+|+......
T Consensus 135 ~la~d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~--------~---~~~-ia~~~~g~~l~~~d~~~~---- 193 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF--------K---GGK-PAVTKDKQRVYSIGWEGT---- 193 (409)
T ss_dssp EEEECSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETC--------C---BCB-CEECTTSSEEEEEBSSTT----
T ss_pred EEEEeCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccC--------C---CCc-eeEecCCCcEEEEecCCC----
Confidence 3444466789998752 246899999987766554221 1 123 3332 345666543221
Q ss_pred CcEEEEECCCCe-EEEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCccc
Q 010034 102 GDFWVLDTDIWQ-WSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRC 179 (519)
Q Consensus 102 ~dv~~yd~~t~~-W~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~ 179 (519)
..++++|+.+.. ...+.... .+....-+++++.. ++.||+... ...+++||+.+.....+...+.......
T Consensus 194 ~~I~~~d~~~~~~~~~~g~~~-~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~ 266 (409)
T 3hrp_A 194 HTVYVYMKASGWAPTRIGQLG-STFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGT 266 (409)
T ss_dssp CEEEEEEGGGTTCEEEEEECC-TTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCC
T ss_pred ceEEEEEcCCCceeEEeeecc-chhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCC
Confidence 168999987543 23331100 10222224445544 679999432 2369999999887665521111111122
Q ss_pred C-e-eEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCC--------C--cceeEEEE-eC
Q 010034 180 G-H-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPS--------S--RCGHTITS-GG 244 (519)
Q Consensus 180 ~-~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~--------~--r~~~s~~~-~~ 244 (519)
. . .++.. ++.||+.... -+.+.+||++.. ...+.-.+..+. . ..-..+++ .+
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQN------------LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETT------------TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred CccccEEEeCCCCEEEEEeCC------------CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 2 1 44444 5799987432 144666676654 333221100000 0 11223444 35
Q ss_pred CEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEccc
Q 010034 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 245 ~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~ 284 (519)
+.||+.-... .+.|.++|+.+.....+..
T Consensus 334 G~lyvad~~~-----------~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 334 GNFYIVDGFK-----------GYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp CCEEEEETTT-----------TCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEeCCC-----------CCEEEEEECCCCEEEEEeC
Confidence 6688875311 2468899976666665543
No 217
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=79.69 E-value=39 Score=31.36 Aligned_cols=55 Identities=18% Similarity=0.204 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CC-eEEEEccccCCcCCCcEEEEECCCCeEEEEe
Q 010034 45 LSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLGDFWVLDTDIWQWSELT 118 (519)
Q Consensus 45 ~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~ 118 (519)
.+.+++||+.+.+....-..+ ..-+.++.. ++ .+|+.+ +.++++|+.+++-....
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~--------~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAP-----------RQITMLAWARDGSKLYGLG--------RDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECC-----------SSCCCEEECTTSSCEEEES--------SSEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCcEEEEEeCC-----------CCcceeEECCCCCEEEEeC--------CeEEEEECCCCcEeeee
Confidence 367999999887654332111 111223332 34 466662 46999999988765433
No 218
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=78.85 E-value=37 Score=30.56 Aligned_cols=157 Identities=12% Similarity=0.096 Sum_probs=79.3
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRL 101 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~ 101 (519)
+++.. ++.+|+|=| +.+|+++.....+........ =+.+|. .--++... ++++|+|-|
T Consensus 28 Ai~~~-~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~---wp~Lp~--~iDAa~~~~~~~~iyfFkG------- 87 (207)
T 1pex_A 28 AITSL-RGETMIFKD-------RFFWRLHPQQVDAELFLTKSF---WPELPN--RIDAAYEHPSHDLIFIFRG------- 87 (207)
T ss_dssp EEEEE-TTEEEEEET-------TEEEEECSSSSCCEEEEHHHH---CTTSCS--SCCEEEEETTTTEEEEEET-------
T ss_pred EEEeC-CCcEEEEEC-------CEEEEEeCCCcCCCceehhHh---ccCCCC--CccEEEEeccCCcEEEEcc-------
Confidence 34444 478999887 457888765544322211100 012232 22233333 589999977
Q ss_pred CcEEEEECCCCeE---EEEeeCCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccC-----
Q 010034 102 GDFWVLDTDIWQW---SELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVT----- 171 (519)
Q Consensus 102 ~dv~~yd~~t~~W---~~~~~~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~----- 171 (519)
+.+|+|+..+-.- ..+... .+|..-..-.+|+. .++++|+|-| +..|+||..+++-..--+.
T Consensus 88 ~~~w~~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~ 159 (207)
T 1pex_A 88 RKFWALNGYDILEGYPKKISEL-GLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEED 159 (207)
T ss_dssp TEEEEESTTCCCTTCSEESTTT-TCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHH
T ss_pred CEEEEEeCCeeccCCceecccc-CCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHc
Confidence 4578886432211 122211 24432122233332 3579999976 4589999876542210000
Q ss_pred -CCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE
Q 010034 172 -GSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ 224 (519)
Q Consensus 172 -~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~ 224 (519)
..+| .... ++...++++|+|-| +..++||..+.+-..
T Consensus 160 ~~Gip-~~iD-aAf~~~g~~YfFkg--------------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 160 FPGIG-DKVD-AVYEKNGYIYFFNG--------------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp STTSC-SCCS-EEEEETTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred CCCCC-CCcc-EEEEcCCcEEEEEC--------------CEEEEEeCCccEEec
Confidence 0122 1233 33345899999976 334556766655443
No 219
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=78.60 E-value=75 Score=33.97 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=66.1
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
+++||+... .+.++.+|..++ .|+.-..... .............+.++.+++||+... + ..++.+
T Consensus 66 ~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~~~-d-----g~l~al 132 (668)
T 1kv9_A 66 DGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAK-VKARTSCCDAVNRGVALWGDKVYVGTL-D-----GRLIAL 132 (668)
T ss_dssp TTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCG-GGGGGCTTCSCCCCCEEEBTEEEEECT-T-----SEEEEE
T ss_pred CCEEEEECC------CCeEEEEECCCChhceEECCCCCc-cccccccccCCccceEEECCEEEEEcC-C-----CEEEEE
Confidence 478988765 246899998876 4876431100 000000000111233456788887542 1 359999
Q ss_pred ECCCCe--EEEEeeCCCCCC-CCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEec
Q 010034 108 DTDIWQ--WSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLP 169 (519)
Q Consensus 108 d~~t~~--W~~~~~~g~~P~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~ 169 (519)
|..|++ |+.-.. +.+. .....+.++. ++.+|+..+.........++.||+.|.+ |+.-.
T Consensus 133 D~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 133 DAKTGKAIWSQQTT--DPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp ETTTCCEEEEEECS--CTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred ECCCCCEeeeeccC--CCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 998874 876542 1111 1112233344 4577764332211234569999999876 87653
No 220
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=78.46 E-value=45 Score=31.34 Aligned_cols=141 Identities=10% Similarity=0.002 Sum_probs=66.9
Q ss_pred cEEEEECCCCeE-EEEeeCCCCCCCCCccEEEEECC----cEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCc
Q 010034 103 DFWVLDTDIWQW-SELTSFGDLPSPRDFAAASAIGN----RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (519)
Q Consensus 103 dv~~yd~~t~~W-~~~~~~g~~P~~r~~~~~~~~~~----~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~ 177 (519)
.+.+||..++.. ..+...........-.+++...+ +.+++.|+.++ .+..||+.+.+-...-. ...
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~--~~~-- 115 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHYV--GHG-- 115 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEEE--SCC--
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeeec--CCC--
Confidence 377788775433 23321111111222233333333 57888887654 48889988765433220 111
Q ss_pred ccCeeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-eCCEEEEEeccC
Q 010034 178 RCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHG 254 (519)
Q Consensus 178 r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~~~~iyv~GG~~ 254 (519)
..-.++... ++.+++.|+.+ ..+..||+.+.+-...-.. .......-.++.. .++..++.|+.+
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVSKD------------HALRLWNIQTDTLVAIFGG-VEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEETT------------SCEEEEETTTTEEEEEECS-TTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCCEEEEEeCC------------CeEEEEEeecCeEEEEecc-cccccCceeEEEECCCCCEEEEecCC
Confidence 111222232 45677777653 2345567776654433210 0111111222333 345566666543
Q ss_pred CCCCcccccceeCcEEEEEcCCC
Q 010034 255 TGGWLSRYDIYYNDTIILDRLSA 277 (519)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~t~ 277 (519)
..+.+||+.+.
T Consensus 183 ------------g~i~i~d~~~~ 193 (366)
T 3k26_A 183 ------------HSLKLWRINSK 193 (366)
T ss_dssp ------------SCEEEEESCSH
T ss_pred ------------CCEEEEECCCC
Confidence 35788887654
No 221
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=77.65 E-value=73 Score=33.33 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=41.4
Q ss_pred cccccccCCCCc--eEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCC--eEEEcccC
Q 010034 210 KGLIEEENETPG--WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA--QWKRLPIG 285 (519)
Q Consensus 210 ~~v~~Yd~~t~~--W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~--~W~~v~~~ 285 (519)
..+..+|+.+++ |+... ..+ ..+..++..++.+|+ |.. ...++++|..+. .|+.-...
T Consensus 444 g~l~a~D~~tG~~~W~~~~---~~~--~~~~~~~t~gg~v~~-g~~------------dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWE---KFA--AWGGTLYTKGGLVWY-ATL------------DGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEEEEECTTTCCEEEEEEE---SSC--CCSBCEEETTTEEEE-ECT------------TSEEEEEETTTCCEEEEEECSS
T ss_pred CeEEEEECCCCCEEEEecC---CCC--ccceeEEECCCEEEE-EcC------------CCeEEEEECCCCCEEEEEeCCC
Confidence 457778888764 87654 111 222334556788877 422 145899998754 46543221
Q ss_pred CCCCCCCcceEEE-EeCCEEEEE
Q 010034 286 NEPPPARAYHSMT-CLGSLYLLF 307 (519)
Q Consensus 286 ~~~p~~R~~~~~v-~~~~~iyv~ 307 (519)
+.....++ ..++++||.
T Consensus 506 -----~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 506 -----GGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp -----CCCSCCEEEEETTEEEEE
T ss_pred -----CcEeeeEEEEECCEEEEE
Confidence 12222233 368888864
No 222
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=77.57 E-value=66 Score=32.80 Aligned_cols=173 Identities=8% Similarity=-0.022 Sum_probs=81.4
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
+++.++.|+.++ .+.++|.....-..+.. +.. .-.+++.-.+++.++.|+.++ .+..||.....-
T Consensus 355 ~g~~l~~~~~dg-----~v~~~~~~~~~~~~~~~----~~~-~v~~~~~s~dg~~l~~~~~d~-----~v~~~~~~~~~~ 419 (577)
T 2ymu_A 355 DGQTIASASDDK-----TVKLWNRNGQLLQTLTG----HSS-SVRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLL 419 (577)
T ss_dssp TSSEEEEEETTS-----EEEEEETTCCEEEEEEC----CSS-CEEEEEECTTSSCEEEEETTS-----EEEEECTTCCEE
T ss_pred CCCEEEEEeCCC-----EEEEEcCCCCEEEEecC----CCC-CeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCCEE
Confidence 566667766543 47788876554444431 111 112233335566777776553 377787554433
Q ss_pred EEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE-e
Q 010034 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~-~ 243 (519)
..+. ....+ . .++... ++++++.++.+ ..+..||.....-..+. .... .. .+++. .
T Consensus 420 ~~~~---~~~~~-v-~~~~~s~d~~~l~~~~~d------------~~v~~w~~~~~~~~~~~---~~~~-~v-~~~~~sp 477 (577)
T 2ymu_A 420 QTLT---GHSSS-V-WGVAFSPDDQTIASASDD------------KTVKLWNRNGQLLQTLT---GHSS-SV-RGVAFSP 477 (577)
T ss_dssp EEEE---CCSSC-E-EEEEECTTSSEEEEEETT------------SEEEEEETTSCEEEEEE---CCSS-CE-EEEEECT
T ss_pred EEec---CCCCC-e-EEEEECCCCCEEEEEcCC------------CEEEEEECCCCEEEEEc---CCCC-CE-EEEEEcC
Confidence 3332 11111 1 122222 55666666543 22344565554444443 1111 11 22333 4
Q ss_pred CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEE-eCCEEEEEccCCC
Q 010034 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC-LGSLYLLFGGFDG 312 (519)
Q Consensus 244 ~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~-~~~~iyv~GG~~~ 312 (519)
++++++.|+.+ ..+.++|.....-..+.... ... .+++. -++++++.||.++
T Consensus 478 d~~~las~~~d------------~~i~iw~~~~~~~~~~~~h~----~~v-~~l~~s~dg~~l~s~~~dg 530 (577)
T 2ymu_A 478 DGQTIASASDD------------KTVKLWNRNGQLLQTLTGHS----SSV-RGVAFSPDGQTIASASDDK 530 (577)
T ss_dssp TSCEEEEEETT------------SEEEEEETTSCEEEEEECCS----SCE-EEEEECTTSSCEEEEETTS
T ss_pred CCCEEEEEeCC------------CEEEEEcCCCCEEEEEeCCC----CCE-EEEEEcCCCCEEEEEECcC
Confidence 56677766543 34677786544433333211 111 22222 2567777777654
No 223
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=77.35 E-value=17 Score=33.23 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=52.0
Q ss_pred eCCeEEEEccccCCcCCCcEEEEECCC----CeEEEEee-----CCCCCCC--CCccEEEEE--CCcEEEEEecCCCCcC
Q 010034 85 IDCHMFIFGGRFGSRRLGDFWVLDTDI----WQWSELTS-----FGDLPSP--RDFAAASAI--GNRKIVMYGGWDGKKW 151 (519)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~dv~~yd~~t----~~W~~~~~-----~g~~P~~--r~~~~~~~~--~~~~iyv~GG~~~~~~ 151 (519)
.++++|+|=| +.+|+||..+ .....-+- -..+|.. ...--++.. .++++|+|-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 5789999977 4589998632 22221110 0123331 002223332 4679999976
Q ss_pred CCcEEEEECCCCcEEEec--cCCCCCC------cccCeeEEE--eCCEEEEEcc
Q 010034 152 LSDVYVLDTISLEWMQLP--VTGSVPP------PRCGHTATM--VEKRLLIYGG 195 (519)
Q Consensus 152 ~~~v~~yd~~t~~W~~l~--~~~~~p~------~r~~~~~~~--~~~~lyv~GG 195 (519)
+..|+||..+++...-+ .+...|. +..--++.. .++++|+|-|
T Consensus 136 -~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG 188 (225)
T 3oyo_A 136 -NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG 188 (225)
T ss_dssp -TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET
T ss_pred -CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC
Confidence 44899998777655310 0001221 222223333 3789999977
No 224
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=77.21 E-value=57 Score=31.92 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=37.7
Q ss_pred CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe--CCEEEEEcccCCCCCcccccccccccc
Q 010034 136 GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLI 213 (519)
Q Consensus 136 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~ 213 (519)
.++.+++.|+.++ .+..||+.+.+-...- ..+........+.+ ++.+++.|+.++ .+.
T Consensus 180 ~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~dg------------~i~ 239 (437)
T 3gre_A 180 EEKSLLVALTNLS-----RVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTRG------------IID 239 (437)
T ss_dssp SSCEEEEEEETTS-----EEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETTS------------CEE
T ss_pred CCCCEEEEEeCCC-----eEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCCC------------eEE
Confidence 3457888887654 4889999887644332 11101112222223 566777776542 345
Q ss_pred cccCCCCceEE
Q 010034 214 EEENETPGWTQ 224 (519)
Q Consensus 214 ~Yd~~t~~W~~ 224 (519)
.||+.+.+...
T Consensus 240 iwd~~~~~~~~ 250 (437)
T 3gre_A 240 IWDIRFNVLIR 250 (437)
T ss_dssp EEETTTTEEEE
T ss_pred EEEcCCccEEE
Confidence 56777655443
No 225
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.73 E-value=97 Score=34.87 Aligned_cols=104 Identities=10% Similarity=0.003 Sum_probs=59.1
Q ss_pred CcEE-EEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC
Q 010034 46 SDVV-VYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (519)
Q Consensus 46 ~~~~-~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~ 123 (519)
..+| ++|+.+..-..+. + ..... +..+. -+++.++++... .+++++|+.+++-..+.. .
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~--------~~~~~-~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~---~ 418 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--E--------NLGNV-FAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIER---S 418 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--C--------CCCSE-EEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE---C
T ss_pred CceEEEEECCCCCceEec--C--------Cccce-eeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEecc---C
Confidence 3577 7888777655543 1 11122 22333 356666665533 379999999988776653 1
Q ss_pred CCCCCccEEEEECCcEEEEEecCCC-----CcCCCcEEEEECCCCcEEEec
Q 010034 124 PSPRDFAAASAIGNRKIVMYGGWDG-----KKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 124 P~~r~~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~t~~W~~l~ 169 (519)
+.. ...+.+.-.+++.+++++.+. ......++.+|+.+.+...+.
T Consensus 419 ~~~-~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 419 REA-MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp SSS-CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CCC-CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 111 123344445666666655432 122357999999998865554
No 226
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=76.71 E-value=23 Score=31.55 Aligned_cols=114 Identities=13% Similarity=0.215 Sum_probs=63.2
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcE---EeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLW---FQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGS 98 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W---~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~ 98 (519)
-+++...++++|+|=| +.+|+|+-.+... ..+... .+.+|..+...+.... ++++|+|-|
T Consensus 54 DAa~~~~~g~~yfFkg-------~~yw~~~~~~~~~gyPk~I~~~-----~~glP~~~IDAA~~~~~~g~~yfFkG---- 117 (196)
T 3c7x_A 54 NTAYERKDGKFVFFKG-------DKHWVFDEASLEPGYPKHIKEL-----GRGLPTDKIDAALFWMPNGKTYFFRG---- 117 (196)
T ss_dssp CEEEECTTSCEEEEET-------TEEEEEETTEECTTCSEEGGGT-----CBSCCSSCCSEEEEETTTTEEEEEET----
T ss_pred cEEEEeCCCcEEEecC-------CEEEEEeCCcccCCCCeEhhhc-----CCCCCCCcccEEEEEccCCEEEEEEC----
Confidence 3444445678999987 5689998542111 112111 1224433333333322 589999977
Q ss_pred cCCCcEEEEECCCCeEEE-----EeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 99 RRLGDFWVLDTDIWQWSE-----LTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 99 ~~~~dv~~yd~~t~~W~~-----~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+..|+||..+++-.. +..-..+|.. -.++....++ ++|+|-| +..|+||..+.+
T Consensus 118 ---~~yw~yd~~~~~v~~gyPk~i~~~~gip~~--idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 118 ---NKYYRFNEELRAVDSEYPKNIKVWEGIPES--PRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp ---TEEEEEETTTTEECTTCSEEGGGSBTCCSS--CSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred ---CEEEEEeCCcccccCCCCccHHHCCCcCCC--cceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 458999998765321 1111123322 2333334344 8999976 448999988764
No 227
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=75.98 E-value=33 Score=31.09 Aligned_cols=146 Identities=12% Similarity=0.139 Sum_probs=70.6
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCc-EEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL-WFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRR 100 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~ 100 (519)
-++..+ ++.+|+|=| +.+|+++..... ......... -+.+|. ....+... .++++|+|=|
T Consensus 34 DAi~~~-~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~---wp~lp~-~IDAA~~~~~~~k~yfFkG------ 95 (218)
T 1gen_A 34 DGIAQI-RGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF---WPELPE-KIDAVYEAPQEEKAVFFAG------ 95 (218)
T ss_dssp SEEEEE-TTEEEEEET-------TEEEEESSTTSCCEEEEEGGGT---CTTSCS-CCSEEEEETTTTEEEEEET------
T ss_pred eEEEeC-CCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHh---cCCCCC-CccEEEEECCCCEEEEEeC------
Confidence 344445 478999987 457777655422 222111100 112232 23222222 2589999977
Q ss_pred CCcEEEEECCCCe---EEEEeeCCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEec---cC-
Q 010034 101 LGDFWVLDTDIWQ---WSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP---VT- 171 (519)
Q Consensus 101 ~~dv~~yd~~t~~---W~~~~~~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~---~~- 171 (519)
+.+|+||..+.. =+.+... .+|.....-.+|.. .++++|+|-| +..|+||..+++-..-- ..
T Consensus 96 -~~yW~y~~~~~~~gyPk~I~~~-g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~ 166 (218)
T 1gen_A 96 -NEYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIAD 166 (218)
T ss_dssp -TEEEEEETTEECTTCSEEGGGG-TCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHH
T ss_pred -CEEEEEcCccccCCCCccHhhc-CCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhh
Confidence 568999853100 0111111 23332112223332 5679999976 34899998776422110 00
Q ss_pred CCCCCcccCeeEEEeC--CEEEEEcc
Q 010034 172 GSVPPPRCGHTATMVE--KRLLIYGG 195 (519)
Q Consensus 172 ~~~p~~r~~~~~~~~~--~~lyv~GG 195 (519)
.-+..+..-.++...+ +.+|+|-|
T Consensus 167 ~w~g~p~~idaAf~~~~~g~~YfFkg 192 (218)
T 1gen_A 167 AWNAIPDNLDAVVDLQGGGHSYFFKG 192 (218)
T ss_dssp HSSSCCSSCSEEEECTTTCEEEEEET
T ss_pred ccCCCCCCCCEEEEEcCCCcEEEEEC
Confidence 0011122223444443 79999966
No 228
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=75.62 E-value=50 Score=30.44 Aligned_cols=111 Identities=12% Similarity=0.077 Sum_probs=57.1
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeeeecCCCCCCCCCCCCcceeEEEEe---CCeEEEEccccCCcCCCc
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGD 103 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~d 103 (519)
.++.+++.|+.+ ..+.+||+.+. .+..+.... .....-.+++.. ++.+++.|+.++ .
T Consensus 21 ~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~ 82 (351)
T 3f3f_A 21 FYGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWR--------AHDSSIVAIDWASPEYGRIIASASYDK-----T 82 (351)
T ss_dssp SSSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEE--------CCSSCEEEEEECCGGGCSEEEEEETTS-----C
T ss_pred CCCCEEEEeeCC-----CeEEEEECCCCCCcceecceec--------cCCCcEEEEEEcCCCCCCEEEEEcCCC-----e
Confidence 445667777643 35777887643 444443211 011112233333 367778887654 4
Q ss_pred EEEEECCCC-------eEEEEeeCCCCCCCCCccEEEEECC--cEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 104 FWVLDTDIW-------QWSELTSFGDLPSPRDFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 104 v~~yd~~t~-------~W~~~~~~g~~P~~r~~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+.+||+.+. .|..+..... ....-.+++...+ +.+++.|+.++ .+..||+.+.+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~ 145 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPS 145 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTT
T ss_pred EEEEecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChH
Confidence 778887664 3444432111 1111223333333 56777777654 37888877654
No 229
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=74.77 E-value=44 Score=29.72 Aligned_cols=113 Identities=16% Similarity=0.159 Sum_probs=58.3
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCC--cE-EeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK--LW-FQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRR 100 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W-~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~ 100 (519)
+++.+. +.+|+|-| +.+|+++.... .. ..+... -+.+|. ....+....++++|+|-|
T Consensus 10 A~~~~~-g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~-----w~glP~-~iDAa~~~~~g~~yfFkg------ 69 (196)
T 3c7x_A 10 TVAMLR-GEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQF-----WRGLPA-SINTAYERKDGKFVFFKG------ 69 (196)
T ss_dssp EEEEET-TEEEEEET-------TEEEEEETTEECTTCSEEHHHH-----STTCCS-SCCEEEECTTSCEEEEET------
T ss_pred EEEEcC-CEEEEEEC-------CEEEEEECCccCCCCceEhhHh-----ccCCCC-CccEEEEeCCCcEEEecC------
Confidence 344454 78999988 55888864310 00 111111 012333 222222224688999977
Q ss_pred CCcEEEEECCCCeE---EEEeeCC-CCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 101 LGDFWVLDTDIWQW---SELTSFG-DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 101 ~~dv~~yd~~t~~W---~~~~~~g-~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+.+|+|+..+... ..+...+ .+|......+.....++++|+|-| +..|+||..+++
T Consensus 70 -~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~ 129 (196)
T 3c7x_A 70 -DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRA 129 (196)
T ss_dssp -TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTE
T ss_pred -CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCccc
Confidence 4589998642110 1222111 244333322222224679999976 348999987754
No 230
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=74.37 E-value=39 Score=31.81 Aligned_cols=71 Identities=11% Similarity=-0.026 Sum_probs=39.9
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEE-C--CcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-G--NRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
+++.++.|+.++ .+.++|+.++....+.. +......-.++.. . ++.+++.|+.++. +..+|+.+
T Consensus 24 ~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~---l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~-----v~iWd~~~ 90 (316)
T 3bg1_A 24 YGTRLATCSSDR-----SVKIFDVRNGGQILIAD---LRGHEGPVWQVAWAHPMYGNILASCSYDRK-----VIIWREEN 90 (316)
T ss_dssp GGCEEEEEETTT-----EEEEEEEETTEEEEEEE---EECCSSCEEEEEECCGGGSSCEEEEETTSC-----EEEECCSS
T ss_pred CCCEEEEEeCCC-----eEEEEEecCCCcEEEEE---EcCCCccEEEEEeCCCCCCCEEEEEECCCE-----EEEEECCC
Confidence 466777777553 47788887775443321 1111111122223 2 2467777776654 78889988
Q ss_pred CcEEEec
Q 010034 163 LEWMQLP 169 (519)
Q Consensus 163 ~~W~~l~ 169 (519)
.+|..+.
T Consensus 91 ~~~~~~~ 97 (316)
T 3bg1_A 91 GTWEKSH 97 (316)
T ss_dssp SCCCEEE
T ss_pred CcceEEE
Confidence 8776543
No 231
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=74.32 E-value=72 Score=31.62 Aligned_cols=18 Identities=11% Similarity=0.084 Sum_probs=14.8
Q ss_pred CccEEEEECCcEEEEEec
Q 010034 128 DFAAASAIGNRKIVMYGG 145 (519)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG 145 (519)
..|++++..++.+|..|-
T Consensus 182 ~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeC
Confidence 468888888889999984
No 232
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=72.78 E-value=71 Score=30.86 Aligned_cols=176 Identities=15% Similarity=0.027 Sum_probs=81.3
Q ss_pred cEEEEECCCCeEEEEeeCCCCCCCCCccE-EEEE--CCcEEEEEecCCCCcCCCcEEEEECCCC--cEEEeccCCCCCCc
Q 010034 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAA-ASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISL--EWMQLPVTGSVPPP 177 (519)
Q Consensus 103 dv~~yd~~t~~W~~~~~~g~~P~~r~~~~-~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~p~~ 177 (519)
.+.++|+.+++-...... ..+....... .+.+ .++.+++.|+.++. +..||+... .-..+. ....
T Consensus 181 ~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~-----v~~wd~~~~~~~~~~~~---~h~~- 250 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGS-EFPSGHTADVLSLSINSLNANMFISGSCDTT-----VRLWDLRITSRAVRTYH---GHEG- 250 (380)
T ss_dssp CEEEECTTTCCEEEEECC-CSSSSCCSCEEEEEECSSSCCEEEEEETTSC-----EEEEETTTTCCCCEEEC---CCSS-
T ss_pred cEEEEEcCCCcEEEEeec-ccCCCCccCeEEEEeecCCCCEEEEEECCCe-----EEEEECCCCCcceEEEC---CcCC-
Confidence 478899988765443210 1222111111 1222 24578888887654 788887632 112221 1111
Q ss_pred ccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCC-C---CCCcceeEEEEeCCEEEEEec
Q 010034 178 RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQ-A---PSSRCGHTITSGGHYLLLFGG 252 (519)
Q Consensus 178 r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~-~---P~~r~~~s~~~~~~~iyv~GG 252 (519)
.-.++... ++..++.|+.++ .+..+|+.++.-...-.... . ..+.....+...++.+++.|+
T Consensus 251 -~v~~v~~~p~~~~l~s~s~D~------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 251 -DINSVKFFPDGQRFGTGSDDG------------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp -CCCEEEECTTSSEEEEECSSS------------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred -CeEEEEEecCCCeEEEEcCCC------------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE
Confidence 11223333 556677776542 23446666654433221100 0 011111122234566666665
Q ss_pred cCCCCCcccccceeCcEEEEEcCCCeEEE-cccCCCCCCCCcceEEEEeCCEEEEEccCCCC
Q 010034 253 HGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (519)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-v~~~~~~p~~R~~~~~v~~~~~iyv~GG~~~~ 313 (519)
.+ ..+.+||..+..-.. +......-..+...-...-++..++.||.++.
T Consensus 318 ~d------------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 318 SN------------GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp TT------------SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred CC------------CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 43 357899987655432 22211111122222222336778888887664
No 233
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=72.57 E-value=45 Score=33.96 Aligned_cols=155 Identities=9% Similarity=0.093 Sum_probs=77.4
Q ss_pred EEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeC---CCCCCCCCccEEEEE-CCcEEEEEecCCCCcCCCcEE
Q 010034 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSF---GDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (519)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~---g~~P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 156 (519)
+++.+++++|+|-| +-+|+++.....+...... ..+|... -++... .++++|+|=|. .+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~i--DAa~~~~~~g~~~fFKg~-------~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNGL--EAAYEFADRDEVRFFKGN-------KYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSSC--CEEEEEGGGTEEEEEETT-------EEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCCe--eEEEEEcCCCeEEEEeCC-------EEE
Confidence 55568999999977 2367776554444332211 1244332 122223 25699999763 377
Q ss_pred EEECCCC---cEEEeccCCCCCC--cccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceE-----Ee
Q 010034 157 VLDTISL---EWMQLPVTGSVPP--PRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-----QL 225 (519)
Q Consensus 157 ~yd~~t~---~W~~l~~~~~~p~--~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~-----~i 225 (519)
+|+..+. -=..+...--.|. .....+.... ++++|+|-|. ..++||..+.+-. .+
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~--------------~yw~yd~~~~~~~~gYPk~I 396 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN--------------KYWRYDEYKRSMDPGYPKMI 396 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT--------------EEEEEETTTTEECSSCSEEH
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC--------------EEEEEeCCCccccCCCCcch
Confidence 7764320 0011110001222 1233333222 5899999762 2333444332211 11
Q ss_pred c--CCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEc
Q 010034 226 K--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (519)
Q Consensus 226 ~--~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v 282 (519)
. -+| +|. ... ++...++++|+|-| +..|+||..+.+-...
T Consensus 397 ~~~fpg-ip~-~iD-AA~~~~g~~YFFkg--------------~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 397 AHDFPG-IGH-KVD-AVFMKDGFFYFFHG--------------TRQYKFDPKTKRILTL 438 (450)
T ss_dssp HHHSTT-SCS-CCS-EEEEETTEEEEEET--------------TEEEEEETTTTEEEEE
T ss_pred hhcCCC-CCC-Ccc-EEEEcCCeEEEEeC--------------CEEEEEECCcceEecc
Confidence 1 111 232 222 44457899999987 4579999887765543
No 234
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=72.05 E-value=75 Score=30.87 Aligned_cols=228 Identities=12% Similarity=0.127 Sum_probs=107.4
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe----CCeEEEEccc------cCCc--CCCcEEEEECC---
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI----DCHMFIFGGR------FGSR--RLGDFWVLDTD--- 110 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~----~~~iyv~GG~------~~~~--~~~dv~~yd~~--- 110 (519)
..+.++|+..+.=..+...+- ..+......-.+..+. +++|++.--. .+.. -.+.+.+||+.
T Consensus 35 g~V~~~~~~~~~~~~~~~~~~---s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~ 111 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNVVIDGA---SSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSE 111 (334)
T ss_dssp TEEEEECTTTCCEEEECCTTT---CCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCT
T ss_pred CEEEEEcCCCCeEEEEecCCc---cccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCC
Confidence 568888888665434321100 0001111222344442 4688886210 0111 13559999988
Q ss_pred CC--eEEEEeeCCCCCC------C-CC--ccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc---EEEeccCCCCCC
Q 010034 111 IW--QWSELTSFGDLPS------P-RD--FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE---WMQLPVTGSVPP 176 (519)
Q Consensus 111 t~--~W~~~~~~g~~P~------~-r~--~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~---W~~l~~~~~~p~ 176 (519)
++ .|..--+ .... + +. .-.+++..+|.+||.+-.. +..++++++.... |-.-. +.+.
T Consensus 112 tg~~~~~~dL~--~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~---~~~~ 182 (334)
T 2p9w_A 112 NSKPVWSVNFE--KVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG----MPAIARVSADGKTVSTFAWES---GNGG 182 (334)
T ss_dssp TCCCSEEEESH--HHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES----SCEEEEECTTSCCEEEEEECC---CCSS
T ss_pred CCCEEEEecCc--cccccccccccccccCCceeEECCCCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecC---CCcc
Confidence 44 4543210 0000 0 21 2245555678999976533 1459999988543 43221 2233
Q ss_pred cccCee-EEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCC--CCCCCCcceeE--EEEeCCEEEE
Q 010034 177 PRCGHT-ATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLP--GQAPSSRCGHT--ITSGGHYLLL 249 (519)
Q Consensus 177 ~r~~~~-~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~--g~~P~~r~~~s--~~~~~~~iyv 249 (519)
.+.+.. ++.. ++.|++..+ . ..+..||+.+.....++.. |........-. ..-.++++++
T Consensus 183 ~~~G~nGIv~~pdg~~Liv~~~-~------------g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vll 249 (334)
T 2p9w_A 183 QRPGYSGITFDPHSNKLIAFGG-P------------RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVL 249 (334)
T ss_dssp SCCSCSEEEEETTTTEEEEESS-S------------SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEE
T ss_pred cccCcceEEEeCCCCEEEEEcC-C------------CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEE
Confidence 455544 4444 346777765 2 2234456654322122211 21101111112 2236888866
Q ss_pred EeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCC---CCcceEEEE----eCCEEEEEccCC
Q 010034 250 FGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPP---ARAYHSMTC----LGSLYLLFGGFD 311 (519)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~---~R~~~~~v~----~~~~iyv~GG~~ 311 (519)
+.-. .+.++++--..+ |+.....+..|. ++.....+. .+++||++.++-
T Consensus 250 V~~~------------~~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 250 VGAR------------APYAISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEEE------------TTEEEEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCG
T ss_pred EEcC------------CCCEEEEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeec
Confidence 5532 133455554444 876554333232 233334434 578999987643
No 235
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=71.37 E-value=1.1e+02 Score=32.35 Aligned_cols=126 Identities=16% Similarity=0.151 Sum_probs=65.1
Q ss_pred EEEeCCeEEEEccccCCcCCCcEEEEEC-CCC--eEEEEeeCCC--CCCCC---CccEEEEE-CCcE----EEEEecCCC
Q 010034 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDT-DIW--QWSELTSFGD--LPSPR---DFAAASAI-GNRK----IVMYGGWDG 148 (519)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~dv~~yd~-~t~--~W~~~~~~g~--~P~~r---~~~~~~~~-~~~~----iyv~GG~~~ 148 (519)
-++.++.||+.+.+ .+.++.+|. .++ .|+.-..... .+..+ ...+.++. .+++ ||+... +
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-d- 130 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-D- 130 (599)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-T-
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-C-
Confidence 35678999998653 235899999 776 5876442110 00001 11122330 3445 777532 1
Q ss_pred CcCCCcEEEEECCCCc--EEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCc--eEE
Q 010034 149 KKWLSDVYVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQ 224 (519)
Q Consensus 149 ~~~~~~v~~yd~~t~~--W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~--W~~ 224 (519)
..++.+|..|.+ |+.-... ..+......+-++.++++|+-.+....+ .-..+..||..+++ |+.
T Consensus 131 ----g~l~AlDa~TG~~~W~~~~~~-~~~~~~~~ssP~v~~g~V~vg~~g~e~g-------~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 131 ----GNVAALNAETGETVWKVENSD-IKVGSTLTIAPYVVKDKVIIGSSGAELG-------VRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp ----SEEEEEETTTCCEEEEEECCC-GGGTCBCCSCCEEETTEEEECCBCGGGT-------CCCEEEEEETTTCCEEEEE
T ss_pred ----CEEEEEECCCCCEEEeecCCC-CCccceeecCCEEECCEEEEEecccccC-------CCCeEEEEECCCCcEEEEE
Confidence 358999998876 8864311 0000011223345688877643211100 01346677887764 776
Q ss_pred ec
Q 010034 225 LK 226 (519)
Q Consensus 225 i~ 226 (519)
-.
T Consensus 199 ~~ 200 (599)
T 1w6s_A 199 YA 200 (599)
T ss_dssp ES
T ss_pred cC
Confidence 54
No 236
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=70.70 E-value=61 Score=29.29 Aligned_cols=66 Identities=20% Similarity=0.317 Sum_probs=36.6
Q ss_pred eeEEEEeCCeEEEEccccCCcCCCcEEEEECCCC-eEEE--EeeC-CCCCCCCCccEEEEE-CCcEEEEEecCCCCcCCC
Q 010034 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSE--LTSF-GDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLS 153 (519)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~-~W~~--~~~~-g~~P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~ 153 (519)
.-+++.+++++|+|=| +.+|+++.... .... +... ..+|.. .. ++... .++++|+|=| +
T Consensus 33 ~DAi~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~~-ID-AA~~~~~~~k~yfFkG-------~ 96 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-ID-AVYEAPQEEKAVFFAG-------N 96 (218)
T ss_dssp CSEEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCSC-CS-EEEEETTTTEEEEEET-------T
T ss_pred EeEEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCCC-cc-EEEEECCCCEEEEEeC-------C
Confidence 3455567899999977 34677765442 1222 1111 124432 22 22222 4579999976 4
Q ss_pred cEEEEEC
Q 010034 154 DVYVLDT 160 (519)
Q Consensus 154 ~v~~yd~ 160 (519)
..|+||-
T Consensus 97 ~yW~y~~ 103 (218)
T 1gen_A 97 EYWIYSA 103 (218)
T ss_dssp EEEEEET
T ss_pred EEEEEcC
Confidence 4889985
No 237
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=70.70 E-value=96 Score=31.53 Aligned_cols=174 Identities=8% Similarity=-0.046 Sum_probs=82.5
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
+++.++.|+.++ .+.++|..+..-..+. .+.. .-.+++...+++.++.|+.++ .+..||.....-
T Consensus 314 ~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~----~~~~-~v~~~~~s~~g~~l~~~~~dg-----~v~~~~~~~~~~ 378 (577)
T 2ymu_A 314 DGQTIASASDDK-----TVKLWNRNGQHLQTLT----GHSS-SVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQLL 378 (577)
T ss_dssp TSSEEEEEETTS-----CEEEEETTSCEEEEEC----CCSS-CEEEEEECTTSSEEEEEETTS-----EEEEEETTCCEE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeEEEe----CCCC-CEEEEEECCCCCEEEEEeCCC-----EEEEEcCCCCEE
Confidence 456666666543 4677887776544443 1111 112333445667777776554 367778655444
Q ss_pred EEeccCCCCCCcccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeC
Q 010034 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGG 244 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~ 244 (519)
..+. ....+. .+++.. +++.++.|+.+ ..+..||.....-..+. .... .....+...+
T Consensus 379 ~~~~---~~~~~v--~~~~~s~dg~~l~~~~~d------------~~v~~~~~~~~~~~~~~---~~~~-~v~~~~~s~d 437 (577)
T 2ymu_A 379 QTLT---GHSSSV--RGVAFSPDGQTIASASDD------------KTVKLWNRNGQLLQTLT---GHSS-SVWGVAFSPD 437 (577)
T ss_dssp EEEE---CCSSCE--EEEEECTTSSCEEEEETT------------SEEEEECTTCCEEEEEE---CCSS-CEEEEEECTT
T ss_pred EEec---CCCCCe--EEEEECCCCCEEEEEeCC------------CEEEEEeCCCCEEEEec---CCCC-CeEEEEECCC
Confidence 4443 111111 112222 45666666543 22344565443333333 1111 1111122245
Q ss_pred CEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEe-CCEEEEEccCCC
Q 010034 245 HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (519)
Q Consensus 245 ~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~-~~~iyv~GG~~~ 312 (519)
++.++.++.+ ..+.+||.....-..+.... ..-.+++.. ++++++.|+.++
T Consensus 438 ~~~l~~~~~d------------~~v~~w~~~~~~~~~~~~~~-----~~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 438 DQTIASASDD------------KTVKLWNRNGQLLQTLTGHS-----SSVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp SSEEEEEETT------------SEEEEEETTSCEEEEEECCS-----SCEEEEEECTTSCEEEEEETTS
T ss_pred CCEEEEEcCC------------CEEEEEECCCCEEEEEcCCC-----CCEEEEEEcCCCCEEEEEeCCC
Confidence 5666666533 34677887665544443321 112222222 567777777654
No 238
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=70.65 E-value=47 Score=37.51 Aligned_cols=162 Identities=13% Similarity=0.077 Sum_probs=83.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEE-EE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW-VL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~-~y 107 (519)
.++..++++. ...++.++..+.....+.. .+..+..+.... +++.+++++. -..+| ++
T Consensus 306 pdG~~la~~~------~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~ 364 (1045)
T 1k32_A 306 LDGDLIAFVS------RGQAFIQDVSGTYVLKVPE---------PLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIY 364 (1045)
T ss_dssp CGGGCEEEEE------TTEEEEECTTSSBEEECSC---------CSCEEEEEECSS-SEEEEEEEET-----TEEEEEEE
T ss_pred CCCCEEEEEE------cCEEEEEcCCCCceEEccC---------CCcceEEeeeEc-CCCeEEEEEC-----CCceEEEE
Confidence 4555444443 2468888887776554421 111122233333 5555555443 24688 99
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEeC
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVE 187 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~ 187 (519)
|..+..-..+. +........+.-.+++.+++++.+ ..++.+|+.+.+-..+... ........+..-+
T Consensus 365 d~~~~~~~~l~-----~~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~---~~~~v~~~~~SpD 431 (1045)
T 1k32_A 365 DYRTGKAEKFE-----ENLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERS---REAMITDFTISDN 431 (1045)
T ss_dssp ETTTCCEEECC-----CCCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEEC---SSSCCCCEEECTT
T ss_pred ECCCCCceEec-----CCccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccC---CCCCccceEECCC
Confidence 99888765553 111122334444566666666543 3699999999887776411 1111112222235
Q ss_pred CEEEEEcccCCCCCcccccccccccccccCCCCceEEec
Q 010034 188 KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (519)
Q Consensus 188 ~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~ 226 (519)
++.+++++....... ..+.-..+..+|..+.+...+.
T Consensus 432 G~~la~~~~~~~~~~--~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 432 SRFIAYGFPLKHGET--DGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp SCEEEEEEEECSSTT--CSCCEEEEEEEETTTTEEEECS
T ss_pred CCeEEEEecCccccc--cCCCCCeEEEEECCCCcEEEee
Confidence 665555554320000 0001245677888887755554
No 239
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=70.55 E-value=83 Score=30.72 Aligned_cols=70 Identities=7% Similarity=0.102 Sum_probs=41.8
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
++.+++.|+.++ .+.+||+.+.+-...-. ..+....-.+++...++..++.|+.++. +..||+.+.+.
T Consensus 181 ~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~dg~-----i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTNLS-----RVIIFDIRTLERLQIIE--NSPRHGAVSSICIDEECCVLILGTTRGI-----IDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEETTS-----EEEEEETTTCCEEEEEE--CCGGGCCEEEEEECTTSCEEEEEETTSC-----EEEEETTTTEE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeeEEEc--cCCCCCceEEEEECCCCCEEEEEcCCCe-----EEEEEcCCccE
Confidence 356777776543 58999998876443321 1111122233333355678888877643 88999988765
Q ss_pred EE
Q 010034 166 MQ 167 (519)
Q Consensus 166 ~~ 167 (519)
..
T Consensus 249 ~~ 250 (437)
T 3gre_A 249 IR 250 (437)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 240
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=69.64 E-value=92 Score=30.87 Aligned_cols=17 Identities=29% Similarity=0.546 Sum_probs=14.6
Q ss_pred ceEEEEECCcEEEEEcC
Q 010034 22 GHSAVNIGKSKVVVFGG 38 (519)
Q Consensus 22 gh~~~~~~~~~lyv~GG 38 (519)
.|++++..++.||.+|-
T Consensus 137 ~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 137 SHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SEEEEEETTSCEEEEEC
T ss_pred CeEEEEeCCCeEEEEeC
Confidence 58888888899999994
No 241
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=69.55 E-value=91 Score=30.82 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=15.3
Q ss_pred cceEEEEECCcEEEEEcCc
Q 010034 21 SGHSAVNIGKSKVVVFGGL 39 (519)
Q Consensus 21 ~gh~~~~~~~~~lyv~GG~ 39 (519)
..|++++..++.||.+|--
T Consensus 130 ~~h~~alt~~G~v~~wG~n 148 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRN 148 (406)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred hhheEEEcCCCcEEEeCCC
Confidence 3588888888999999953
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=69.31 E-value=1.3e+02 Score=32.32 Aligned_cols=126 Identities=16% Similarity=0.064 Sum_probs=66.4
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~ 106 (519)
.+++||+.+. .+.++.+|..++ .|+.-...... ............+.++.+++||+... + ..++.
T Consensus 69 ~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~v~v~~~-d-----g~l~A 135 (689)
T 1yiq_A 69 VDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRH-RAGEACCDAVNRGVAVWKGKVYVGVL-D-----GRLEA 135 (689)
T ss_dssp ETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGG-GGGGCTTCSCCCCCEEETTEEEEECT-T-----SEEEE
T ss_pred ECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCcc-ccccccccCCCCccEEECCEEEEEcc-C-----CEEEE
Confidence 3478998764 246999999876 48764211000 00000000111233556888887642 1 35899
Q ss_pred EECCCCe--EEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEe
Q 010034 107 LDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (519)
Q Consensus 107 yd~~t~~--W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l 168 (519)
+|..|++ |+.-.............+.++. ++.+|+-.+......-..++.||..|.+ |+.-
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 9998874 8765420110111112233344 4577774322111234569999999876 8865
No 243
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=69.27 E-value=35 Score=30.99 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=58.3
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCc
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~d 103 (519)
+++...++.+|+|=| +.+|+++.....+........ =+.+|. .. -++...++++|+|=| +.
T Consensus 22 Ai~~~~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~---wpgLP~-~I-DAA~~~~~~~yfFkG-------~~ 82 (219)
T 1hxn_A 22 AMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQ---WPQGPS-TV-DAAFSWEDKLYLIQD-------TK 82 (219)
T ss_dssp EEEECTTSCEEEEET-------TEEEESSSSSCTTCCEEGGGT---CTTSCS-SC-SEEEEETTEEEEEET-------TE
T ss_pred EEEECCCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhh---ccCCCC-Cc-cEEEEECCcEEEecC-------CE
Confidence 333334578999887 457777654332211111100 012232 22 234445899999976 45
Q ss_pred EEEEECCCC-eE-----EEEeeCCCCCCC--CCccEEEEE--CCcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 104 FWVLDTDIW-QW-----SELTSFGDLPSP--RDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 104 v~~yd~~t~-~W-----~~~~~~g~~P~~--r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
+|+|+..++ +- +.+...-.+|.. ...--+|+. .++++|+|-| +..|+||..+
T Consensus 83 yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~ 144 (219)
T 1hxn_A 83 VYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKS 144 (219)
T ss_dssp EEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGG
T ss_pred EEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCC
Confidence 899987542 11 111110124433 112233332 4679999977 3479999654
No 244
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=67.56 E-value=53 Score=33.40 Aligned_cols=157 Identities=11% Similarity=0.096 Sum_probs=78.2
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE--eCCeEEEEccccCCcCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRL 101 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~--~~~~iyv~GG~~~~~~~ 101 (519)
+++.+. +.+|+|=| +.+|+++.....+........ =+.+|. .--++.. .++++|+|=|
T Consensus 267 Ai~~~~-ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~---Wp~LP~--~iDAa~~~~~~g~~~fFKg------- 326 (450)
T 1su3_A 267 AITTIR-GEVMFFKD-------RFYMRTNPFYPEVELNFISVF---WPQLPN--GLEAAYEFADRDEVRFFKG------- 326 (450)
T ss_dssp EEEEET-TEEEEEET-------TEEEECCTTSSSCEEEEGGGT---CTTSCS--SCCEEEEEGGGTEEEEEET-------
T ss_pred eEEecC-CeEEEEeC-------CEEEEEcCCCCcccceehhHh---ccCCCC--CeeEEEEEcCCCeEEEEeC-------
Confidence 344444 78999988 346777665444432221110 011232 2223333 3689999976
Q ss_pred CcEEEEECCCCe--E-EEEe-eCCCCCCCCCccEEE-EE-CCcEEEEEecCCCCcCCCcEEEEECCCCcEEE-----ecc
Q 010034 102 GDFWVLDTDIWQ--W-SELT-SFGDLPSPRDFAAAS-AI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LPV 170 (519)
Q Consensus 102 ~dv~~yd~~t~~--W-~~~~-~~g~~P~~r~~~~~~-~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-----l~~ 170 (519)
+.+|+|+..+-. + ..+. .. .+|..-..--++ .. .++++|+|=| +..|+||..+.+-.. +..
T Consensus 327 ~~~W~~~~~~~~~gyP~~i~~~~-g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~ 398 (450)
T 1su3_A 327 NKYWAVQGQNVLHGYPKDIYSSF-GFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAH 398 (450)
T ss_dssp TEEEEEETTEECTTCSEEHHHHH-CCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHH
T ss_pred CEEEEecCCcccCCCceeeehhh-cCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhh
Confidence 357888743210 0 1111 00 133311122222 23 4579999976 458999987643221 110
Q ss_pred C-CCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE
Q 010034 171 T-GSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ 224 (519)
Q Consensus 171 ~-~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~ 224 (519)
. ...| .... +++..++++|+|-| +..++||..+.+-..
T Consensus 399 ~fpgip-~~iD-AA~~~~g~~YFFkg--------------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 399 DFPGIG-HKVD-AVFMKDGFFYFFHG--------------TRQYKFDPKTKRILT 437 (450)
T ss_dssp HSTTSC-SCCS-EEEEETTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred cCCCCC-CCcc-EEEEcCCeEEEEeC--------------CEEEEEECCcceEec
Confidence 0 0112 1223 34446889999976 334556766665543
No 245
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=67.03 E-value=59 Score=32.03 Aligned_cols=153 Identities=12% Similarity=0.220 Sum_probs=75.6
Q ss_pred EEEEeCCeEEEEccccCCcCCCcEEEEECCCCeE--EEEee-CCCCCCCCCccEEEEE-CCcEEEEEecCCCCcCCCcEE
Q 010034 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQW--SELTS-FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (519)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W--~~~~~-~g~~P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 156 (519)
+++.+++++|+|=| +-+|+++.....- ..+.. -..+|... . ++... .++++|+|-| +..|
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~~i-D-Aa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPSGI-E-AAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCSSC-C-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCCCc-c-EEEEecCCCEEEEEeC-------CEEE
Confidence 34557899999966 3467776543221 11111 01355332 2 22233 3569999976 3367
Q ss_pred EEECCCCc--E-EEeccCCCCCCc--ccCeeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEE-----e
Q 010034 157 VLDTISLE--W-MQLPVTGSVPPP--RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-----L 225 (519)
Q Consensus 157 ~yd~~t~~--W-~~l~~~~~~p~~--r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~-----i 225 (519)
+|+..... + ..+..- -+|.. ....+...- ++++|+|-| +..++||..+++-.. +
T Consensus 249 r~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~~~~yfFkG--------------~~yw~yd~~~~~v~~gyPk~I 313 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVD--------------NQYWRYDERRQMMDPGYPKLI 313 (365)
T ss_dssp ECSTTSCTTTCSEETTTT-TCCTTCCCCCEEEEETTTTEEEEEET--------------TEEEEEETTTTEECSSCCCCH
T ss_pred EEcCCcccCCCCceeeec-cCCCCCCCcCEEEEeCCCCEEEEEEC--------------CEEEEEeCCcceecCCCCcch
Confidence 77543211 1 122210 12321 223222222 579999966 223445554432211 1
Q ss_pred c--CCCCCCCCcceeEEEEe-CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEE
Q 010034 226 K--LPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (519)
Q Consensus 226 ~--~~g~~P~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~ 281 (519)
. -+ .+|. ... ++... ++++|.|-| +..|+||..+.+-..
T Consensus 314 ~~~f~-g~p~-~iD-aA~~~~~g~~YfFkg--------------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 314 TKNFQ-GIGP-KID-AVFYSKNKYYYFFQG--------------SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHHST-TCCS-SCS-EEEEETTTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred hhcCC-CCCC-ccc-eeeEecCCcEEEEeC--------------CEEEEEECCccEEec
Confidence 0 01 1222 222 34434 889999877 457999998877655
No 246
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=65.90 E-value=85 Score=29.08 Aligned_cols=106 Identities=7% Similarity=-0.093 Sum_probs=52.4
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++.+++.|+.+ ..+.+||+.+++-...- .+ .. ..-.+++.. ++.+++.|+.++ .+.++
T Consensus 65 ~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~-~~--------h~-~~v~~~~~~~~~~~l~sgs~D~-----~v~lW 124 (304)
T 2ynn_A 65 ARKNWIIVGSDD-----FRIRVFNYNTGEKVVDF-EA--------HP-DYIRSIAVHPTKPYVLSGSDDL-----TVKLW 124 (304)
T ss_dssp GGGTEEEEEETT-----SEEEEEETTTCCEEEEE-EC--------CS-SCEEEEEECSSSSEEEEEETTS-----CEEEE
T ss_pred CCCCEEEEECCC-----CEEEEEECCCCcEEEEE-eC--------CC-CcEEEEEEcCCCCEEEEECCCC-----eEEEE
Confidence 334555556543 35778888876532211 10 11 112233333 456677777554 47888
Q ss_pred ECCCCe-EEEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 108 DTDIWQ-WSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 108 d~~t~~-W~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
|..++. -...- .... ..-.+++... ++.+++.|+.++ .+..||+.+.
T Consensus 125 d~~~~~~~~~~~---~~h~-~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 125 NWENNWALEQTF---EGHE-HFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp EGGGTTEEEEEE---CCCC-SCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCS
T ss_pred ECCCCcchhhhh---cccC-CcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 887652 11111 0111 1112222222 446777887665 3778887654
No 247
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=65.10 E-value=81 Score=28.58 Aligned_cols=199 Identities=12% Similarity=-0.107 Sum_probs=106.0
Q ss_pred eEEEEE-CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCc
Q 010034 23 HSAVNI-GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSR 99 (519)
Q Consensus 23 h~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~ 99 (519)
|.++.. .++.||+.... .+.++++++....-..+... ... .-+.+++. +++||+.-..
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~---------~~~-~p~~ia~d~~~~~lyv~d~~---- 99 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQ---------DLG-SPEGIALDHLGRTIFWTDSQ---- 99 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECT---------TCC-CEEEEEEETTTTEEEEEETT----
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEEC---------CCC-CccEEEEEecCCeEEEEECC----
Confidence 344443 34688886642 25689999877643332211 111 22445544 5789987432
Q ss_pred CCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcc
Q 010034 100 RLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR 178 (519)
Q Consensus 100 ~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r 178 (519)
.+.+.++|++...-..+... .+..| ..+++.. ++++|+..... ..+.++++++....-+.+.. ... .
T Consensus 100 -~~~I~~~~~~g~~~~~~~~~-~~~~P---~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~-~~~---~ 167 (267)
T 1npe_A 100 -LDRIEVAKMDGTQRRVLFDT-GLVNP---RGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQ-DNL---G 167 (267)
T ss_dssp -TTEEEEEETTSCSCEEEECS-SCSSE---EEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEEC-TTC---S
T ss_pred -CCEEEEEEcCCCCEEEEEEC-CCCCc---cEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEE-CCC---C
Confidence 24689999876543333321 11112 2344443 57999875321 13568888887544333321 111 1
Q ss_pred cCeeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCC
Q 010034 179 CGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTG 256 (519)
Q Consensus 179 ~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~ 256 (519)
.-..++.. +++||+.-.. -+.+.++|++...-..+...+..| .++++.++.+|+....
T Consensus 168 ~P~gia~d~~~~~lyv~d~~------------~~~I~~~~~~g~~~~~~~~~~~~P-----~gi~~d~~~lyva~~~--- 227 (267)
T 1npe_A 168 LPNGLTFDAFSSQLCWVDAG------------THRAECLNPAQPGRRKVLEGLQYP-----FAVTSYGKNLYYTDWK--- 227 (267)
T ss_dssp CEEEEEEETTTTEEEEEETT------------TTEEEEEETTEEEEEEEEECCCSE-----EEEEEETTEEEEEETT---
T ss_pred CCcEEEEcCCCCEEEEEECC------------CCEEEEEecCCCceEEEecCCCCc-----eEEEEeCCEEEEEECC---
Confidence 22334443 4689987532 145666777654333332111122 3455668899996532
Q ss_pred CCcccccceeCcEEEEEcCCCeEEE
Q 010034 257 GWLSRYDIYYNDTIILDRLSAQWKR 281 (519)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~t~~W~~ 281 (519)
.+.|+++|+.+.+-..
T Consensus 228 ---------~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 228 ---------TNSVIAMDLAISKEMD 243 (267)
T ss_dssp ---------TTEEEEEETTTTEEEE
T ss_pred ---------CCeEEEEeCCCCCceE
Confidence 2568999998766543
No 248
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=64.35 E-value=32 Score=31.42 Aligned_cols=117 Identities=14% Similarity=0.045 Sum_probs=61.4
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeee--ecCCCCCCCCCCCC----cceeEEEE-eCCeEEEEcc
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPE--CTGNGSNGQVGPGP----RAFHIAVA-IDCHMFIFGG 94 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~--~~~~~~~~~~~p~~----R~~h~~~~-~~~~iyv~GG 94 (519)
+++...++.+|+|=| +.+|+||..++ .-.... ..-. ..=+.+|.. ....+... .++++|+|-|
T Consensus 64 Aa~~~~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~-~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG 135 (225)
T 3oyo_A 64 CSFHTEASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIA-EMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG 135 (225)
T ss_dssp EEEECSTTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHH-HHCGGGTTSTTTSCCCEEEECSSTTEEEEEET
T ss_pred EEEEcCCCeEEEEcC-------CEEEEEecccccCCCceecCchhhh-hcCCCCCCcccccccceEEEECCCCcEEEEeC
Confidence 444335679999988 56899986432 111111 0000 000112221 22222221 3689999987
Q ss_pred ccCCcCCCcEEEEECCCCeEEEEe--eCCCCCC------CCCccEEEEE-CCcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 95 RFGSRRLGDFWVLDTDIWQWSELT--SFGDLPS------PRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 95 ~~~~~~~~dv~~yd~~t~~W~~~~--~~g~~P~------~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
+.+|+||..+++...-+ .....|. +..--++... .++++|+|-| +..|+||..+
T Consensus 136 -------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~~ 198 (225)
T 3oyo_A 136 -------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFTP 198 (225)
T ss_dssp -------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECCT
T ss_pred -------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCc
Confidence 46899998877665421 0001222 1112233332 5679999976 3489999873
No 249
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=63.91 E-value=65 Score=29.19 Aligned_cols=61 Identities=28% Similarity=0.445 Sum_probs=34.2
Q ss_pred eCCeEEEEccccCCcCCCcEEEEECCCCeE--EEEeeC-CCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECC
Q 010034 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQW--SELTSF-GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (519)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W--~~~~~~-g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 161 (519)
.++++|+|=| +.+|+++.....+ ..+... ..+|.... ++... ++++|+|=| +.+|+|+..
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~~ID--AA~~~-~~~~yfFkG-------~~yw~~~~~ 89 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPSTVD--AAFSW-EDKLYLIQD-------TKVYVFLTK 89 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCSSCS--EEEEE-TTEEEEEET-------TEEEEEECS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCCCcc--EEEEE-CCcEEEecC-------CEEEEEeCC
Confidence 5789999976 3366666533222 122211 13554332 23334 679999966 348999865
Q ss_pred C
Q 010034 162 S 162 (519)
Q Consensus 162 t 162 (519)
+
T Consensus 90 ~ 90 (219)
T 1hxn_A 90 G 90 (219)
T ss_dssp S
T ss_pred C
Confidence 3
No 250
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=63.27 E-value=98 Score=28.90 Aligned_cols=68 Identities=9% Similarity=-0.031 Sum_probs=39.4
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcE
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 165 (519)
+++.++.|+.++ .+.++|+.+++-...-. .+.. .-.+++...++.+++.|+.++. +..||+....-
T Consensus 76 dg~~l~s~s~D~-----~v~~wd~~~~~~~~~~~---~h~~-~v~~~~~~~~~~~l~s~s~D~~-----i~vwd~~~~~~ 141 (319)
T 3frx_A 76 DGAYALSASWDK-----TLRLWDVATGETYQRFV---GHKS-DVMSVDIDKKASMIISGSRDKT-----IKVWTIKGQCL 141 (319)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCSS-CEEEEEECTTSCEEEEEETTSC-----EEEEETTSCEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCeeEEEc---cCCC-cEEEEEEcCCCCEEEEEeCCCe-----EEEEECCCCeE
Confidence 566777777553 58899998886433221 1111 1123333355677888887654 77788765543
Q ss_pred EE
Q 010034 166 MQ 167 (519)
Q Consensus 166 ~~ 167 (519)
..
T Consensus 142 ~~ 143 (319)
T 3frx_A 142 AT 143 (319)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=63.01 E-value=80 Score=33.73 Aligned_cols=122 Identities=14% Similarity=0.063 Sum_probs=65.0
Q ss_pred EEECCcEEEEEecCCCCcCCCcEEEEECCCCc--EEEeccCCCC--CCc---ccCeeEEEeCCEEEEEcccCCCCCcccc
Q 010034 133 SAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSV--PPP---RCGHTATMVEKRLLIYGGRGGGGPIMGD 205 (519)
Q Consensus 133 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~~~~~--p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~d 205 (519)
++. ++.||+... ...++.+|..|.+ |+.-...... +.. ....+.++.++++|+....
T Consensus 63 ~v~-~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--------- 126 (668)
T 1kv9_A 63 LFH-DGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD--------- 126 (668)
T ss_dssp EEE-TTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT---------
T ss_pred EEE-CCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC---------
Confidence 344 559998764 2458999988765 8864311000 000 0112344567888875421
Q ss_pred cccccccccccCCCC--ceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCC--eEEE
Q 010034 206 LWALKGLIEEENETP--GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA--QWKR 281 (519)
Q Consensus 206 ~~~l~~v~~Yd~~t~--~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~--~W~~ 281 (519)
..++.+|..++ .|+.-... .........+.++.++.+|+..+.... .....++.||+.+. .|+.
T Consensus 127 ----g~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~~~~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 127 ----GRLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVVKGKVIIGNGGAEY-------GVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp ----SEEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEE
T ss_pred ----CEEEEEECCCCCEeeeeccCC-CCCcceecCCCEEECCEEEEeCCCCCc-------CCCCEEEEEECCCCcEEEEe
Confidence 33556687766 48765421 111112222335578888774332111 13467999998764 4875
Q ss_pred c
Q 010034 282 L 282 (519)
Q Consensus 282 v 282 (519)
-
T Consensus 195 ~ 195 (668)
T 1kv9_A 195 Y 195 (668)
T ss_dssp E
T ss_pred c
Confidence 3
No 252
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=61.99 E-value=61 Score=31.54 Aligned_cols=143 Identities=11% Similarity=0.042 Sum_probs=70.1
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCe---EEEEeeCCCCCCCCCccEEE-EECCc-EEEEEecCCCCcCCCcEEEEEC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ---WSELTSFGDLPSPRDFAAAS-AIGNR-KIVMYGGWDGKKWLSDVYVLDT 160 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~---W~~~~~~g~~P~~r~~~~~~-~~~~~-~iyv~GG~~~~~~~~~v~~yd~ 160 (519)
++++||.+-... ..++++++.... |-.-. +.+..+.+.... ...++ .+++..+ . ..+++||+
T Consensus 147 ~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~~---~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD~ 213 (334)
T 2p9w_A 147 DGNSYVAFALGM----PAIARVSADGKTVSTFAWES---GNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFDV 213 (334)
T ss_dssp TSCEEEEEEESS----CEEEEECTTSCCEEEEEECC---CCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEEC
T ss_pred CCCEEEeCCCCC----CeEEEEeCCCCEEeeeeecC---CCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEcC
Confidence 579999765431 358999997653 43221 223344444444 44344 6666654 3 34999998
Q ss_pred CCCcEEEeccC--CCCCCcccCee--EEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCC---
Q 010034 161 ISLEWMQLPVT--GSVPPPRCGHT--ATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPS--- 233 (519)
Q Consensus 161 ~t~~W~~l~~~--~~~p~~r~~~~--~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~--- 233 (519)
.+.....++.. |........-. ....++++.++.-... ..+.+ .+ . +.|......+..|.
T Consensus 214 ~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~------~~~~l-----~S-~-DgW~sa~~~g~~~~~~~ 280 (334)
T 2p9w_A 214 SKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAP------YAISF-----RS-W-DNWKSANIKKTKRSELQ 280 (334)
T ss_dssp SSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETT------EEEEE-----EC-S-STTSEEEEEEEECGGGG
T ss_pred CCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCC------CEEEE-----EC-C-CCcceeEEeeeecCccc
Confidence 85433123221 21101011111 2235788755543211 11112 22 2 23877654444443
Q ss_pred CcceeEEEE----eCCEEEEEeccC
Q 010034 234 SRCGHTITS----GGHYLLLFGGHG 254 (519)
Q Consensus 234 ~r~~~s~~~----~~~~iyv~GG~~ 254 (519)
++...++++ .+++||++.+.-
T Consensus 281 ~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 281 NSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp SSCEEEEEEEEETTEEEEEEEECCG
T ss_pred cCceeEEEEeccccCCeEEEEeeec
Confidence 233333334 678999998754
No 253
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=61.56 E-value=1e+02 Score=31.13 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=14.9
Q ss_pred CccEEEEECCcEEEEEec
Q 010034 128 DFAAASAIGNRKIVMYGG 145 (519)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG 145 (519)
..|++++..++++|..|-
T Consensus 266 ~~hs~alt~~G~v~~wG~ 283 (473)
T 3of7_A 266 ENHCFALTKDNKLVSWGL 283 (473)
T ss_dssp SSEEEEEETTSCEEEEEE
T ss_pred CCeEEEEecCCCEEEeCC
Confidence 468888888889999984
No 254
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=60.33 E-value=1.3e+02 Score=29.54 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=15.1
Q ss_pred cceEEEEECCcEEEEEcC
Q 010034 21 SGHSAVNIGKSKVVVFGG 38 (519)
Q Consensus 21 ~gh~~~~~~~~~lyv~GG 38 (519)
..|++++..++.||.+|-
T Consensus 120 ~~hs~alt~~G~v~~wG~ 137 (413)
T 1a12_A 120 DSHTAALTDDGRVFLWGS 137 (413)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEcCCCcEEEeeC
Confidence 358888888899999995
No 255
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=59.89 E-value=1.2e+02 Score=29.01 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=54.7
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcc--eeEEEE--eCCeEEEEccccCCcCCCcEEEEECCCC--eEEEEee
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRA--FHIAVA--IDCHMFIFGGRFGSRRLGDFWVLDTDIW--QWSELTS 119 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~--~h~~~~--~~~~iyv~GG~~~~~~~~dv~~yd~~t~--~W~~~~~ 119 (519)
..+.+||+.+++-...-.. ..+.... -.++.. .++.+++.|+.++ .+.++|+... .-..+.
T Consensus 180 ~~i~~wd~~~~~~~~~~~~-------~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~~- 246 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGS-------EFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVRTYH- 246 (380)
T ss_dssp SCEEEECTTTCCEEEEECC-------CSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCEEEC-
T ss_pred CcEEEEEcCCCcEEEEeec-------ccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceEEEC-
Confidence 4578889888764432211 1111111 112222 2567888888664 4788888632 112221
Q ss_pred CCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEe
Q 010034 120 FGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (519)
Q Consensus 120 ~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l 168 (519)
.+.. .-.+++...++..++.|+.++. +..||+.+.+-...
T Consensus 247 ---~h~~-~v~~v~~~p~~~~l~s~s~D~~-----i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 247 ---GHEG-DINSVKFFPDGQRFGTGSDDGT-----CRLFDMRTGHQLQV 286 (380)
T ss_dssp ---CCSS-CCCEEEECTTSSEEEEECSSSC-----EEEEETTTTEEEEE
T ss_pred ---CcCC-CeEEEEEecCCCeEEEEcCCCe-----EEEEECCCCcEEEE
Confidence 1111 1233444456678888887654 88899988765443
No 256
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=59.37 E-value=1.5e+02 Score=29.86 Aligned_cols=19 Identities=21% Similarity=0.088 Sum_probs=15.7
Q ss_pred cceEEEEECCcEEEEEcCc
Q 010034 21 SGHSAVNIGKSKVVVFGGL 39 (519)
Q Consensus 21 ~gh~~~~~~~~~lyv~GG~ 39 (519)
..|++++..++.||.+|--
T Consensus 76 ~~Ht~alt~~G~v~~wG~n 94 (473)
T 3of7_A 76 GMHTLALDEESNVWSWGCN 94 (473)
T ss_dssp SSEEEEEETTCCEEEEECC
T ss_pred CCeEEEEecCCeEEEeECC
Confidence 4688888888999999963
No 257
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=59.16 E-value=1.1e+02 Score=28.32 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=50.2
Q ss_pred CeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 87 ~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
+++++.|+.++ .+.+||..+......... ..+ ...-.+++...++..++.|+.++ .+..||+.+.+..
T Consensus 54 g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~-~~h-~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 54 GNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQ-QMH-TGPVLDVCWSDDGSKVFTASCDK-----TAKMWDLSSNQAI 121 (368)
T ss_dssp SEEEEEEETTS-----EEEEEEECTTSCEEEEEE-EEC-SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEE
T ss_pred ceEEEEECCCC-----cEEEEEcCCCCceeEEEe-ccc-cCCEEEEEECcCCCEEEEEcCCC-----cEEEEEcCCCCce
Confidence 37777777654 478888876332221100 011 11122333344556777777654 4889999998866
Q ss_pred EeccCCCCCCcccCeeEEE--e-CCEEEEEcccC
Q 010034 167 QLPVTGSVPPPRCGHTATM--V-EKRLLIYGGRG 197 (519)
Q Consensus 167 ~l~~~~~~p~~r~~~~~~~--~-~~~lyv~GG~~ 197 (519)
.+. ....+. .++.. . ++.+++.|+.+
T Consensus 122 ~~~---~~~~~v--~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 122 QIA---QHDAPV--KTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp EEE---ECSSCE--EEEEEEECSSCEEEEEEETT
T ss_pred eec---cccCce--EEEEEEeCCCCCEEEEccCC
Confidence 654 222221 22232 2 56777777653
No 258
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=58.48 E-value=2e+02 Score=30.96 Aligned_cols=201 Identities=13% Similarity=0.029 Sum_probs=93.3
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCC-cEEeeeecCCCCCCCCCCCCcceeEEEE-eCC-eEEEEccccCCcCCCcEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVA-IDC-HMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~-~iyv~GG~~~~~~~~dv~~ 106 (519)
|++.++|+-..++.....++++|+.++ .. +.. ..+......+. -++ .||.. ..........++.
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~----------~~~~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD----------KVSGTNGEIVWGPDHTSLFYV-TKDETLRENKVWR 251 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC----------CEEEECSCCEECSSTTEEEEE-EECTTCCEEEEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc----------cccCceeeEEEecCCCEEEEE-EECCCCCCCEEEE
Confidence 566555543333333346899999887 52 110 00111111122 233 44433 2222222246888
Q ss_pred EECCCCeE--EEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCC--cE--EEeccCCCCCCccc
Q 010034 107 LDTDIWQW--SELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISL--EW--MQLPVTGSVPPPRC 179 (519)
Q Consensus 107 yd~~t~~W--~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~--~W--~~l~~~~~~p~~r~ 179 (519)
.++.+..= ..+.. .+..........-.++ .|++..... ..+.++.+|+.+. .+ +.+.... ..+
T Consensus 252 ~~lgt~~~~~~lv~~---~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~~~l~~~~--~~~-- 321 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYE---EHNPLFSAFMYKAADTNTLCIGSQSP---ETAEVHLLDLRKGNAHNTLEIVRPRE--KGV-- 321 (751)
T ss_dssp EETTSCGGGCEEEEE---CCCTTCEEEEEECTTSSEEEEEEECS---SCEEEEEEESSSCTTCCCEEESSCCC--TTC--
T ss_pred EECCCCchhcEEEEe---cCCCceEEEEEECCCCCEEEEEecCC---CCceEEEEECCCCCCCceeEEeecCC--CCc--
Confidence 88876531 12211 1222222233333444 454444322 3567999999875 56 6664211 111
Q ss_pred CeeEE-EeCCEEEEEcccCCCCCcccccccccccccccCCC-CceEE-ecCCCCCCCCcceeEEEEeCCEEEEEeccCCC
Q 010034 180 GHTAT-MVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET-PGWTQ-LKLPGQAPSSRCGHTITSGGHYLLLFGGHGTG 256 (519)
Q Consensus 180 ~~~~~-~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t-~~W~~-i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~ 256 (519)
.+... ..++.||+..-..... ...++.+|..+ ..|+. +-.. .....-......++.|++.....
T Consensus 322 ~~s~~~~~g~~l~~~t~~~~a~--------~~~L~~~d~~~~~~~~~~li~~---~~~~~l~~~~~~~~~lv~~~~~~-- 388 (751)
T 2xe4_A 322 RYDVQMHGTSHLVILTNEGGAV--------NHKLLIAPRGQPSDWSHVLVDH---SEDVFMESIAVRSNYLVVAGRRA-- 388 (751)
T ss_dssp CEEEEEETTTEEEEEECTTTCT--------TCEEEEEETTSTTCCCCEEECC---CSSEEEEEEEECSSEEEEEEEET--
T ss_pred eEEEeeeeCCEEEEEeCCCCCC--------CcEEEEEcCCCcccceeeEECC---CCCcEEEEEEEECCEEEEEEEeC--
Confidence 12222 2367888886543111 12345567665 57876 4311 11111123344567777665432
Q ss_pred CCcccccceeCcEEEEEc
Q 010034 257 GWLSRYDIYYNDTIILDR 274 (519)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~ 274 (519)
-...++++|+
T Consensus 389 --------g~~~l~~~dl 398 (751)
T 2xe4_A 389 --------GLTRIWTMMA 398 (751)
T ss_dssp --------TEEEEEEEEC
T ss_pred --------CEEEEEEEec
Confidence 2356888886
No 259
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=57.25 E-value=1.8e+02 Score=30.10 Aligned_cols=157 Identities=11% Similarity=0.025 Sum_probs=77.5
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC---CCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL---PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~---P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
++++++.||.++ .+.++|..+++-...-....+ .....-.+++.-.+++.++.||.++ .+..+|+.+
T Consensus 201 dg~~las~s~D~-----~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-----~v~lWd~~~ 270 (611)
T 1nr0_A 201 DGSLFASTGGDG-----TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-----TIKIWNVAT 270 (611)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEECCC-----cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 567788887654 488899887765432210000 0111112233335667777887654 488899998
Q ss_pred CcEEEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE
Q 010034 163 LEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS 242 (519)
Q Consensus 163 ~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~ 242 (519)
.+....-..+. ........+..++..++.++.++ .+..+|+.+..-...- .+ . .... .+++.
T Consensus 271 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~s~s~d~------------~i~~~~~~~~~~~~~~-~g-h-~~~v-~~l~~ 332 (611)
T 1nr0_A 271 LKVEKTIPVGT--RIEDQQLGIIWTKQALVSISANG------------FINFVNPELGSIDQVR-YG-H-NKAI-TALSS 332 (611)
T ss_dssp TEEEEEEECCS--SGGGCEEEEEECSSCEEEEETTC------------CEEEEETTTTEEEEEE-CC-C-SSCE-EEEEE
T ss_pred CceeeeecCCC--CccceeEEEEEcCCEEEEEeCCC------------cEEEEeCCCCCcceEE-cC-C-CCCE-EEEEE
Confidence 87655431111 11111222233555555554332 2334565555422221 11 1 1111 12222
Q ss_pred -eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEc
Q 010034 243 -GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (519)
Q Consensus 243 -~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v 282 (519)
-+++.++.|+.+ ..+.++|+.+.....+
T Consensus 333 spdg~~l~s~s~D------------~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 333 SADGKTLFSADAE------------GHINSWDISTGISNRV 361 (611)
T ss_dssp CTTSSEEEEEETT------------SCEEEEETTTCCEEEC
T ss_pred eCCCCEEEEEeCC------------CcEEEEECCCCceeee
Confidence 355666666543 3477889887765543
No 260
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=57.20 E-value=1.4e+02 Score=31.38 Aligned_cols=109 Identities=8% Similarity=0.019 Sum_probs=57.2
Q ss_pred cEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCC----cCCCcEEEEECCCCeEEEEeeCCC
Q 010034 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS----RRLGDFWVLDTDIWQWSELTSFGD 122 (519)
Q Consensus 47 ~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~----~~~~dv~~yd~~t~~W~~~~~~g~ 122 (519)
.++++|+.+++-..+.... ....-........-+++.++++..... ....+++++|+.+++-..+....
T Consensus 38 ~i~~~d~~~g~~~~~~~~~------~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~- 110 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGK------KIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE- 110 (723)
T ss_dssp CEEEBCGGGCCCEEEECTT------TTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-
T ss_pred CEEEEECCCCcEEEEeccc------cccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-
Confidence 6899999887655443211 010001222223335665566543322 22467999999988765554211
Q ss_pred CCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEec
Q 010034 123 LPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (519)
Q Consensus 123 ~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~ 169 (519)
....+ ....+.-.+|+.++++.. ..++.+|..+.+-.++.
T Consensus 111 ~~~~~-~~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 111 VSNAK-LQYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp CCSCC-CSBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred ccccc-ccccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 01111 112222234544455432 36999999888877765
No 261
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=56.72 E-value=1.7e+02 Score=31.23 Aligned_cols=18 Identities=0% Similarity=-0.143 Sum_probs=13.6
Q ss_pred CcEEEEEcCCCeEEEccc
Q 010034 267 NDTIILDRLSAQWKRLPI 284 (519)
Q Consensus 267 ~~v~~yd~~t~~W~~v~~ 284 (519)
..+|.||..+..-..+..
T Consensus 344 ~~l~~~~~~~~~~~~lT~ 361 (740)
T 4a5s_A 344 RHICYFQIDKKDCTFITK 361 (740)
T ss_dssp EEEEEEETTCSSCEESCC
T ss_pred eEEEEEECCCCceEeccc
Confidence 679999998777666554
No 262
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=54.42 E-value=72 Score=29.90 Aligned_cols=94 Identities=6% Similarity=0.086 Sum_probs=46.7
Q ss_pred eeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcC-CCcEEE
Q 010034 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKW-LSDVYV 157 (519)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~-~~~v~~ 157 (519)
.|++++.++++|.+|-......-.. .........+.. -..|+++. .++++|..|--..... ...
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p----~~~~~~v~~i~~-------G~~hs~al-~~G~v~~wG~n~~gqlg~p~--- 215 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVP----AEAQSGVDDVAG-------GIFHSLAL-KDGKVIAWGDNRYKQTTVPT--- 215 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCC----GGGGSSEEEEEE-------CSSEEEEE-ETTEEEEEECCTTSTTCCCG---
T ss_pred CEEEEEECCEEEEecCCCCCCCCCc----eecCCCeEEEEe-------cCCEEEEE-ECCeEEEEECCCCCCCCCCc---
Confidence 4666666888888876432211000 000123444432 23577777 7889999985332111 000
Q ss_pred EECCCCcEEEeccCCCCCCcccCeeEEEeCCEEEEEccc
Q 010034 158 LDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGR 196 (519)
Q Consensus 158 yd~~t~~W~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 196 (519)
........+. .-..|+++..++++|..|-.
T Consensus 216 --~~~~~v~~i~-------~G~~h~~al~~g~v~~wG~n 245 (282)
T 3qhy_B 216 --EALSGVSAIA-------SGEWYSLALKNGKVIAWGSS 245 (282)
T ss_dssp --GGGSSCCEEE-------ECSSCEEEEETTEEEEESTT
T ss_pred --ccCCCceEEE-------cCCCEEEEEECCEEEEecCC
Confidence 0011222332 11235544448899999854
No 263
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=52.86 E-value=28 Score=31.89 Aligned_cols=62 Identities=11% Similarity=0.199 Sum_probs=37.9
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEE-----EeeCCCCCCCC-----CccEEEEE--CCcEEEEEecCCCCcCCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSE-----LTSFGDLPSPR-----DFAAASAI--GNRKIVMYGGWDGKKWLS 153 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~-----~~~~g~~P~~r-----~~~~~~~~--~~~~iyv~GG~~~~~~~~ 153 (519)
++++|+|-| +.+|+||..+++-.. +. ...|... ..--+|.. .++++|+|-| +
T Consensus 129 ~~k~yfFkG-------~~yw~~d~~~~~~~~gyPk~i~--~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~ 192 (227)
T 3lp9_A 129 GKEVYLFKG-------DQYARIDYGSNSMVNKEIKSIS--SGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------D 192 (227)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEESSSSCEEHH--HHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------T
T ss_pred CCEEEEEEC-------CEEEEEeCCCccccCCCCeEHH--HCCCCccccccCCCccEEEEcCCCceEEEEEC-------C
Confidence 589999977 468999988664321 11 0133211 11223333 5679999976 3
Q ss_pred cEEEEECCCC
Q 010034 154 DVYVLDTISL 163 (519)
Q Consensus 154 ~v~~yd~~t~ 163 (519)
..|+||..+.
T Consensus 193 ~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 HYARVKVTPX 202 (227)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEECCcc
Confidence 4789998765
No 264
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=52.51 E-value=92 Score=33.13 Aligned_cols=114 Identities=13% Similarity=0.185 Sum_probs=56.4
Q ss_pred EEEECCcEEEEEcCcCCCccCCcEEEEEcCCC-cEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCC
Q 010034 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 25 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~ 102 (519)
++...++.+|+|=| +.+|+++.... .......... -+.+|. ....+... .++++|+|=| +
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~---wp~LP~-~IDAA~~~~~~~k~yFFkG-------~ 509 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF---WPELPE-KIDAVYEAPQEEKAVFFAG-------N 509 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGT---CTTSCS-SCSBCCEETTTTEEEEEET-------T
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceecccc---CCCCCc-cceEEEEECCCCEEEEEec-------C
Confidence 34444578999987 45788876542 2222111100 011222 22222222 2578999966 4
Q ss_pred cEEEEECCCC--eE-EEEeeCCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 103 DFWVLDTDIW--QW-SELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 103 dv~~yd~~t~--~W-~~~~~~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
.+|+|+..+- -+ +.+... .+|.....--+|.. .++++|+|-| +..|+||..+++
T Consensus 510 ~yWry~~~~l~~GYPk~Is~~-G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~ 568 (631)
T 1ck7_A 510 EYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKK 568 (631)
T ss_dssp EEEEEETTEECTTCCEEGGGG-TCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTE
T ss_pred EEEEECCCccccCCCccchhc-CCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCccc
Confidence 5899985310 01 111111 12321111122222 4679999976 358999987653
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=50.29 E-value=1.6e+02 Score=27.32 Aligned_cols=116 Identities=10% Similarity=-0.060 Sum_probs=58.6
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeEEEEccccCCcCCC
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (519)
.++...++.+|+.....+ ...+++||+.+++...+... +..+.....+.. ++.+|+.-- ...
T Consensus 76 gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~---------~~~~~~~g~~~~~~~~~~v~d~-----~~g 138 (306)
T 2p4o_A 76 GLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTL---------PDAIFLNGITPLSDTQYLTADS-----YRG 138 (306)
T ss_dssp EEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEEC---------TTCSCEEEEEESSSSEEEEEET-----TTT
T ss_pred eEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeC---------CCccccCcccccCCCcEEEEEC-----CCC
Confidence 333344566777553211 12478899888887665432 333444444433 456777532 124
Q ss_pred cEEEEECCCCeEEEE--eeCC--CCCCCC--CccEEEEECCcEEEEEecCCCCcCCCcEEEEECCC
Q 010034 103 DFWVLDTDIWQWSEL--TSFG--DLPSPR--DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (519)
Q Consensus 103 dv~~yd~~t~~W~~~--~~~g--~~P~~r--~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t 162 (519)
.+|++|+.+..-+.. .... ..+... ..... ...++.+|+.-- ..+.+++||+..
T Consensus 139 ~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-s~dg~~lyv~d~-----~~~~I~~~~~~~ 198 (306)
T 2p4o_A 139 AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-KRFGNFLYVSNT-----EKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-EEETTEEEEEET-----TTTEEEEEEBCT
T ss_pred eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-CcCCCEEEEEeC-----CCCEEEEEEeCC
Confidence 699999987532211 1100 011111 11122 333347888642 235689999875
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=50.19 E-value=2.7e+02 Score=29.94 Aligned_cols=164 Identities=10% Similarity=0.017 Sum_probs=75.4
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCC-eEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~-~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
+++.++|+-...+.....+++.|+.++ +. ++. .++ ....+.+...++ .||.. -.+.......+++.++.+.
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~--~~~--~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD--KVS--GTNGEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKL 257 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC--CEE--EECSCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSC
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc--ccc--CceeeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCC
Confidence 566555543332222346999999987 52 110 111 111222232333 44443 2222222356888888775
Q ss_pred cE--EEeccCCCCCCcccCeeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCC--ce--EEecCCCCCCCCc
Q 010034 164 EW--MQLPVTGSVPPPRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETP--GW--TQLKLPGQAPSSR 235 (519)
Q Consensus 164 ~W--~~l~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~--~W--~~i~~~g~~P~~r 235 (519)
.= ..+- ..+..........- ++ .|++..... . . +.++.+|+.+. .+ ..+... ...+.
T Consensus 258 ~~~~~lv~---~~~~~~~~~~~~~SpDg~~l~~~~~~~-~---~------~~l~~~d~~~~~~~~~~~~l~~~--~~~~~ 322 (751)
T 2xe4_A 258 QSEDVCLY---EEHNPLFSAFMYKAADTNTLCIGSQSP-E---T------AEVHLLDLRKGNAHNTLEIVRPR--EKGVR 322 (751)
T ss_dssp GGGCEEEE---ECCCTTCEEEEEECTTSSEEEEEEECS-S---C------EEEEEEESSSCTTCCCEEESSCC--CTTCC
T ss_pred chhcEEEE---ecCCCceEEEEEECCCCCEEEEEecCC-C---C------ceEEEEECCCCCCCceeEEeecC--CCCce
Confidence 31 1221 01112222222222 44 455544321 1 1 34555577664 46 555411 11111
Q ss_pred ceeEEE-EeCCEEEEEeccCCCCCcccccceeCcEEEEEcCC-CeEEE
Q 010034 236 CGHTIT-SGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS-AQWKR 281 (519)
Q Consensus 236 ~~~s~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t-~~W~~ 281 (519)
.+.. ..++.+|+..-.... ....++++|+.+ ..|+.
T Consensus 323 --~s~~~~~g~~l~~~t~~~~a--------~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 323 --YDVQMHGTSHLVILTNEGGA--------VNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp --EEEEEETTTEEEEEECTTTC--------TTCEEEEEETTSTTCCCC
T ss_pred --EEEeeeeCCEEEEEeCCCCC--------CCcEEEEEcCCCccccee
Confidence 2222 347788887654311 235789999876 67876
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=49.38 E-value=1.2e+02 Score=31.81 Aligned_cols=121 Identities=12% Similarity=0.106 Sum_probs=62.7
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~ 106 (519)
.+++||+.+.. +.++++|..++ .|+.-..... ...+.+.......++.+++||+... -..++.
T Consensus 67 ~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~---~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 67 SDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPD---DIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp ETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCT---TCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred ECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCc---ccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 34789987753 23899999876 4877432110 0000000111233457888887532 135899
Q ss_pred EECCCCe--EEEEeeCCCCCCCC--CccEEEEECC---c--EEEEEecCCCC-cCCCcEEEEECCCCc--EEEe
Q 010034 107 LDTDIWQ--WSELTSFGDLPSPR--DFAAASAIGN---R--KIVMYGGWDGK-KWLSDVYVLDTISLE--WMQL 168 (519)
Q Consensus 107 yd~~t~~--W~~~~~~g~~P~~r--~~~~~~~~~~---~--~iyv~GG~~~~-~~~~~v~~yd~~t~~--W~~l 168 (519)
+|..|++ |+.-.. .+... ...+.++.++ + .+| +|....+ .....++.||+.|.+ |+.-
T Consensus 132 lD~~TG~~~W~~~~~---~~~~~~~~~~sP~v~~~~~~G~~~v~-vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 132 LNKNTGKVVWKKKFA---DHGAGYTMTGAPTIVKDGKTGKVLLI-HGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EESSSCCEEEEEECS---CGGGTCBCCSCCEEEECTTTCCEEEE-ECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEeeecCC---CCCcCcccccCCEEeCCCcCCcEEEE-EeccccccCCCCEEEEEECCCCCEEeecC
Confidence 9998874 876431 11111 1112223322 1 444 4432111 123569999998776 8653
No 268
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=49.30 E-value=1.5e+02 Score=26.70 Aligned_cols=181 Identities=10% Similarity=-0.086 Sum_probs=94.3
Q ss_pred eEEEEe--CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEE
Q 010034 80 HIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVY 156 (519)
Q Consensus 80 h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~ 156 (519)
+..++. +++||+.-.. .+.++++|+.+..-..+... .+. .-+++++.. ++.||+.-.. .+.+.
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~-~~~---~p~~ia~d~~~~~lyv~d~~-----~~~I~ 104 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQ-DLG---SPEGIALDHLGRTIFWTDSQ-----LDRIE 104 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECT-TCC---CEEEEEEETTTTEEEEEETT-----TTEEE
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEEC-CCC---CccEEEEEecCCeEEEEECC-----CCEEE
Confidence 455554 4689987432 24689999987653333211 111 223444443 4689987542 34688
Q ss_pred EEECCCCcEEEeccCCCCCCcccCeeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCC
Q 010034 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSS 234 (519)
Q Consensus 157 ~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~ 234 (519)
++|+....-+.+... ....| ..+++. +++||+...... -..+++++++...-+.+... ..
T Consensus 105 ~~~~~g~~~~~~~~~-~~~~P---~~i~vd~~~g~lyv~~~~~~----------~~~I~~~~~dg~~~~~~~~~-~~--- 166 (267)
T 1npe_A 105 VAKMDGTQRRVLFDT-GLVNP---RGIVTDPVRGNLYWTDWNRD----------NPKIETSHMDGTNRRILAQD-NL--- 166 (267)
T ss_dssp EEETTSCSCEEEECS-SCSSE---EEEEEETTTTEEEEEECCSS----------SCEEEEEETTSCCCEEEECT-TC---
T ss_pred EEEcCCCCEEEEEEC-CCCCc---cEEEEeeCCCEEEEEECCCC----------CcEEEEEecCCCCcEEEEEC-CC---
Confidence 999876543333211 11122 233443 578998753211 13345556554433333211 11
Q ss_pred cceeEEEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEcc
Q 010034 235 RCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (519)
Q Consensus 235 r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG 309 (519)
..-.++++ .++.+|+.-.. .+.|+++|+....-..+... ...-.+++..++.+|+.-.
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~------------~~~I~~~~~~g~~~~~~~~~-----~~~P~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAG------------THRAECLNPAQPGRRKVLEG-----LQYPFAVTSYGKNLYYTDW 226 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETT------------TTEEEEEETTEEEEEEEEEC-----CCSEEEEEEETTEEEEEET
T ss_pred CCCcEEEEcCCCCEEEEEECC------------CCEEEEEecCCCceEEEecC-----CCCceEEEEeCCEEEEEEC
Confidence 12234444 35789886532 35789999876433333221 1122455666889998753
No 269
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=49.27 E-value=2e+02 Score=28.08 Aligned_cols=60 Identities=7% Similarity=0.005 Sum_probs=32.6
Q ss_pred eeEEEEe-CCeEEEEccccC----CcCCCcEEEEE----CCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEec
Q 010034 79 FHIAVAI-DCHMFIFGGRFG----SRRLGDFWVLD----TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGG 145 (519)
Q Consensus 79 ~h~~~~~-~~~iyv~GG~~~----~~~~~dv~~yd----~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG 145 (519)
.|++++. +++||.+|-... .........-. +.......++. -..|++++..++++|..|-
T Consensus 117 ~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~-------G~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 117 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA-------GGAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE-------CSSEEEEEETTSCEEEEEC
T ss_pred CeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe-------CcCeEEEEeCCCeEEEeCC
Confidence 4777665 689999985432 11111111100 01112333332 2468888888889999984
No 270
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=48.08 E-value=1.7e+02 Score=27.10 Aligned_cols=108 Identities=11% Similarity=0.038 Sum_probs=54.0
Q ss_pred CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEE
Q 010034 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVL 107 (519)
Q Consensus 29 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~y 107 (519)
.++..++.|+.+ ..+.+||+.+++-...- . ...... .++.. -++.+++.|+.++ .+.++
T Consensus 75 ~dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~-~--------~h~~~v-~~~~~~~~~~~l~s~s~D~-----~i~vw 134 (319)
T 3frx_A 75 ADGAYALSASWD-----KTLRLWDVATGETYQRF-V--------GHKSDV-MSVDIDKKASMIISGSRDK-----TIKVW 134 (319)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEEEE-E--------CCSSCE-EEEEECTTSCEEEEEETTS-----CEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCCeeEEE-c--------cCCCcE-EEEEEcCCCCEEEEEeCCC-----eEEEE
Confidence 345566666643 45788898877532211 1 111111 22222 2456777777654 47788
Q ss_pred ECCCCeEEEEeeCCCCCCCCCccEEEEEC------CcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 108 DTDIWQWSELTSFGDLPSPRDFAAASAIG------NRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 108 d~~t~~W~~~~~~g~~P~~r~~~~~~~~~------~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
|.....-..+.. ... .-.+..... ++..++.||.++ .+..+|+.+.+-.
T Consensus 135 d~~~~~~~~~~~----h~~-~v~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~ 189 (319)
T 3frx_A 135 TIKGQCLATLLG----HND-WVSQVRVVPNEKADDDSVTIISAGNDK-----MVKAWNLNQFQIE 189 (319)
T ss_dssp ETTSCEEEEECC----CSS-CEEEEEECCC------CCEEEEEETTS-----CEEEEETTTTEEE
T ss_pred ECCCCeEEEEec----cCC-cEEEEEEccCCCCCCCccEEEEEeCCC-----EEEEEECCcchhh
Confidence 887654333321 111 111122221 223566676654 3788898876543
No 271
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=46.02 E-value=3e+02 Score=29.35 Aligned_cols=206 Identities=11% Similarity=-0.024 Sum_probs=99.5
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEECCCC----eEEEEee
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIW----QWSELTS 119 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd~~t~----~W~~~~~ 119 (519)
..+.++++.+.....+.. ..+.-+++++. ++.||+.--. ...++++++.+. .-..+..
T Consensus 386 ~~I~~id~~~~~~~~~~~-----------~~~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~i~ 449 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIP-----------NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVIS 449 (699)
T ss_dssp TC-CEECTTSCCEECCSC-----------CCTTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCCBCC
T ss_pred cceEEEeCCCCcceeeec-----------cCcceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEEEEe
Confidence 356777777766655421 11222344443 5678876322 245888888751 1111110
Q ss_pred CCCCCCCCCccEEEEE-CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe--CCEEEEEccc
Q 010034 120 FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGR 196 (519)
Q Consensus 120 ~g~~P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 196 (519)
..+..+ .++++. .++.||+.-. ..+.++++++....-+.+... .+..|+ .+++. ++.||+.--.
T Consensus 450 -~~~~~P---~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~-~~~~P~---giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 450 -RDIQAP---DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRE-QGSKPR---AIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp -SCC--C---CCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCC-SSCCCC---CEECCSSSSCCEECCCS
T ss_pred -CCCCCc---ceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeC-CCCCcc---eEEEccCCCcEEEcccC
Confidence 011111 223332 3458888632 234588999887655544311 222232 23332 5678875311
Q ss_pred CCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEc
Q 010034 197 GGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDR 274 (519)
Q Consensus 197 ~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~ 274 (519)
. ...|++++++...-+.+... .+..| .++++ .+++||+.-. ..+.|+++|+
T Consensus 517 ~-----------~~~I~~~~~dG~~~~~l~~~-~l~~P---nGlavd~~~~~LY~aD~------------~~~~I~~~d~ 569 (699)
T 1n7d_A 517 T-----------PAKIKKGGLNGVDIYSLVTE-NIQWP---NGITLDLLSGRLYWVDS------------KLHSISSIDV 569 (699)
T ss_dssp S-----------SCCEEBCCSSSCCCCEESCS-SCSSC---CCEEECTTTCCEEEEET------------TTTEEEEECS
T ss_pred C-----------CCeEEEEeCCCCCeeEEEeC-CCCCc---cEEEEeccCCEEEEEec------------CCCeEEEEcc
Confidence 0 13455556654433333211 12111 23344 4678888653 2356899998
Q ss_pred CCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEcc
Q 010034 275 LSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (519)
Q Consensus 275 ~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG 309 (519)
....-+.+.... .......++++.++.||+.-.
T Consensus 570 dG~~~~~~~~~~--~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 570 NGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp SSSCCEEECCCS--SSCSSCCCCEEETTEEEEECS
T ss_pred CCCceEEEEecC--CcCCCceEeEEECCEEEEEeC
Confidence 764444443221 111233456667888998763
No 272
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=44.52 E-value=2.2e+02 Score=27.19 Aligned_cols=163 Identities=8% Similarity=-0.077 Sum_probs=0.0
Q ss_pred EEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCc
Q 010034 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (519)
Q Consensus 24 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~d 103 (519)
.+....++.+++.|+.+. +.+++..++........ .............-+++.++.++.++... ..
T Consensus 181 ~v~fspdg~~l~s~s~~~------~~~~~~~~~~~~~~~~~-------~~~~~~v~~v~fspdg~~l~~~s~d~~~~-~~ 246 (365)
T 4h5i_A 181 DLHFSTDGKVVAYITGSS------LEVISTVTGSCIARKTD-------FDKNWSLSKINFIADDTVLIAASLKKGKG-IV 246 (365)
T ss_dssp EEEECTTSSEEEEECSSC------EEEEETTTCCEEEEECC-------CCTTEEEEEEEEEETTEEEEEEEESSSCC-EE
T ss_pred EEEEccCCceEEecccee------EEEEEeccCcceeeeec-------CCCCCCEEEEEEcCCCCEEEEEecCCcce-eE
Q ss_pred EEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeE
Q 010034 104 FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTA 183 (519)
Q Consensus 104 v~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~ 183 (519)
++.+|.............-......-.+++.-.++++++.|+.++. +.+||..+.+-...- .......-.++
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~-----V~iwd~~~~~~~~~~---~~gH~~~V~~v 318 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS-----IALVKLKDLSMSKIF---KQAHSFAITEV 318 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC-----EEEEETTTTEEEEEE---TTSSSSCEEEE
T ss_pred EeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE-----EEEEECCCCcEEEEe---cCcccCCEEEE
Q ss_pred EEe-CCEEEEEcccCCCCCcccccccccccccccCCCC
Q 010034 184 TMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP 220 (519)
Q Consensus 184 ~~~-~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~ 220 (519)
+.. ++++++-|+.+ ..+.++|+..+
T Consensus 319 ~fSpdg~~laS~S~D------------~tvrvw~ip~~ 344 (365)
T 4h5i_A 319 TISPDSTYVASVSAA------------NTIHIIKLPLN 344 (365)
T ss_dssp EECTTSCEEEEEETT------------SEEEEEECCTT
T ss_pred EECCCCCEEEEEeCC------------CeEEEEEcCCC
No 273
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=44.08 E-value=2.3e+02 Score=27.49 Aligned_cols=17 Identities=18% Similarity=0.257 Sum_probs=14.6
Q ss_pred ceEEEEECCcEEEEEcC
Q 010034 22 GHSAVNIGKSKVVVFGG 38 (519)
Q Consensus 22 gh~~~~~~~~~lyv~GG 38 (519)
.|++++..++.||.+|-
T Consensus 117 ~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 117 KHCLALSSEGEVYSWGE 133 (389)
T ss_dssp SEEEEEETTSCEEEEEC
T ss_pred CeEEEEcCCCCEEEEeC
Confidence 58888888899999995
No 274
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=43.34 E-value=1.9e+02 Score=26.22 Aligned_cols=65 Identities=12% Similarity=0.021 Sum_probs=35.0
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCC--CeEEEEeeCCCCCCCCCccEEEEE-C--CcEEEEEecCCCCcCCCcEEEEEC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDI--WQWSELTSFGDLPSPRDFAAASAI-G--NRKIVMYGGWDGKKWLSDVYVLDT 160 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t--~~W~~~~~~g~~P~~r~~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~ 160 (519)
++++++.|+.++ .+.+||..+ ..+..+.. +......-.++.+ . ++.+++.|+.++. +..||+
T Consensus 22 ~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~-----v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDS---WRAHDSSIVAIDWASPEYGRIIASASYDKT-----VKLWEE 88 (351)
T ss_dssp SSSEEEEEETTS-----EEEEEEECSSSCCEEEEEE---EECCSSCEEEEEECCGGGCSEEEEEETTSC-----EEEEEE
T ss_pred CCCEEEEeeCCC-----eEEEEECCCCCCcceecce---eccCCCcEEEEEEcCCCCCCEEEEEcCCCe-----EEEEec
Confidence 556677777553 477777764 34444432 1111111222333 3 3577788877643 777887
Q ss_pred CCC
Q 010034 161 ISL 163 (519)
Q Consensus 161 ~t~ 163 (519)
.+.
T Consensus 89 ~~~ 91 (351)
T 3f3f_A 89 DPD 91 (351)
T ss_dssp CTT
T ss_pred CCC
Confidence 664
No 275
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=43.23 E-value=2.1e+02 Score=26.72 Aligned_cols=63 Identities=6% Similarity=-0.006 Sum_probs=33.1
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
++.+++.|+.+ ..+.++|+.+.+....- . ...... .+++. -+++.++.||.++ .+.++|
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~-~--------~h~~~v-~~v~~sp~~~~l~s~~~d~-----~i~~wd 146 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRF-V--------GHQSEV-YSVAFSPDNRQILSAGAER-----EIKLWN 146 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEE-E--------CCCSCE-EEEEECSSTTEEEEEETTS-----CEEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEE-c--------CCCCcE-EEEEECCCCCEEEEEcCCC-----EEEEEe
Confidence 34455556543 45778898877643221 1 111111 22222 2556667777553 477888
Q ss_pred CCCC
Q 010034 109 TDIW 112 (519)
Q Consensus 109 ~~t~ 112 (519)
+...
T Consensus 147 ~~~~ 150 (343)
T 2xzm_R 147 ILGE 150 (343)
T ss_dssp SSSC
T ss_pred ccCC
Confidence 8644
No 276
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=42.54 E-value=2.5e+02 Score=27.46 Aligned_cols=151 Identities=9% Similarity=-0.059 Sum_probs=80.1
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECC-cEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+++||+....+ ..+.++|+.++.-..+...+ ...+ .+...+ +.+|+....... .++++|+.+..
T Consensus 141 ~g~lyv~d~~~-----~~I~~id~~~g~~~~~~~~~-----~~~~-ia~~~~g~~l~~~d~~~~~----~I~~~d~~~~~ 205 (409)
T 3hrp_A 141 NNTVLAYQRDD-----PRVRLISVDDNKVTTVHPGF-----KGGK-PAVTKDKQRVYSIGWEGTH----TVYVYMKASGW 205 (409)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTTEEEEEEETC-----CBCB-CEECTTSSEEEEEBSSTTC----EEEEEEGGGTT
T ss_pred CCCEEEEecCC-----CcEEEEECCCCEEEEeeccC-----CCCc-eeEecCCCcEEEEecCCCc----eEEEEEcCCCc
Confidence 57899886522 46899999998877765421 1122 333333 356666432211 68999987553
Q ss_pred -EEEeccCCCCCCcccCeeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcce-e-E
Q 010034 165 -WMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG-H-T 239 (519)
Q Consensus 165 -W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~-~-s 239 (519)
...+... ..+....-+.+++. ++.||+... . ..+++||+.+.....+...+........ . .
T Consensus 206 ~~~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~---~----------~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 206 APTRIGQL-GSTFSGKIGAVALDETEEWLYFVDS---N----------KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp CEEEEEEC-CTTSCSCCCBCEECTTSSEEEEECT---T----------CEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred eeEEeeec-cchhcCCcEEEEEeCCCCeEEEEEC---C----------CcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 2333100 01011222334444 578998422 1 3466778887776555211111111111 1 3
Q ss_pred EEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCC
Q 010034 240 ITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (519)
Q Consensus 240 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~ 277 (519)
+++ .++.+|+... ..+.|++||+...
T Consensus 272 ia~~p~~g~lyv~d~------------~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQ------------NLSSVYKITPDGE 299 (409)
T ss_dssp EEEETTTTEEEEEET------------TTTEEEEECTTCC
T ss_pred EEEeCCCCEEEEEeC------------CCCEEEEEecCCC
Confidence 343 3688998753 2356899988765
No 277
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=40.41 E-value=2.7e+02 Score=27.21 Aligned_cols=102 Identities=14% Similarity=0.064 Sum_probs=52.6
Q ss_pred cceEEEEECCcEEEEEcCcCCCcc----C------CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe-CCeE
Q 010034 21 SGHSAVNIGKSKVVVFGGLVDKRF----L------SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHM 89 (519)
Q Consensus 21 ~gh~~~~~~~~~lyv~GG~~~~~~----~------~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~i 89 (519)
..|++++..++.||.+|--..++. . .-..+ .+ ......+.. -..|++++. ++++
T Consensus 68 ~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~l-~~~i~~va~-------------G~~hs~alt~~G~v 132 (413)
T 1a12_A 68 GMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-EL-QEKVVQVSA-------------GDSHTAALTDDGRV 132 (413)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEEC-CC-CSCEEEEEE-------------CSSEEEEEETTSCE
T ss_pred CCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEe-cC-CCcEEEEec-------------CCCeEEEEcCCCcE
Confidence 458888888899999995321110 0 00000 11 112333322 135777665 5799
Q ss_pred EEEccc-cCCc------CCCc----EEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecC
Q 010034 90 FIFGGR-FGSR------RLGD----FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGW 146 (519)
Q Consensus 90 yv~GG~-~~~~------~~~d----v~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~ 146 (519)
|.+|-. +... .... ..+ +.......++. -..|++++..++++|.+|--
T Consensus 133 ~~wG~~~n~~GqlG~~~~~~~~~~P~~v--~~~~~i~~ia~-------G~~hs~alt~~G~v~~wG~n 191 (413)
T 1a12_A 133 FLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDVPVVKVAS-------GNDHLVMLTADGDLYTLGCG 191 (413)
T ss_dssp EEEECEEETTEEEESSBBTBCEEEEEEE--CCSSCEEEEEE-------CSSEEEEEETTSCEEEEECC
T ss_pred EEeeCCcCCCCccCcCCccccccCCEEe--cCCCCEEEEEe-------cCceEEEEcCCCCEEEeeCC
Confidence 999952 1110 0000 011 12223444432 23688888888899999853
No 278
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=40.07 E-value=1.3e+02 Score=32.06 Aligned_cols=66 Identities=20% Similarity=0.233 Sum_probs=36.6
Q ss_pred eEEEEeCCeEEEEccccCCcCCCcEEEEECCCC-eEEEEeeC---CCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcE
Q 010034 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSF---GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDV 155 (519)
Q Consensus 80 h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~-~W~~~~~~---g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v 155 (519)
-+++..++++|+|=| +.+|+++.... ........ ..+|... ..+.....++++|+|=| +..
T Consensus 447 DAit~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~I-DAA~~~~~~~k~yFFkG-------~~y 511 (631)
T 1ck7_A 447 DGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEKI-DAVYEAPQEEKAVFFAG-------NEY 511 (631)
T ss_dssp SEEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSSC-SBCCEETTTTEEEEEET-------TEE
T ss_pred ceeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCccc-eEEEEECCCCEEEEEec-------CEE
Confidence 345567889999976 34788776542 22222211 1244322 22222224568999965 348
Q ss_pred EEEEC
Q 010034 156 YVLDT 160 (519)
Q Consensus 156 ~~yd~ 160 (519)
|+|+-
T Consensus 512 Wry~~ 516 (631)
T 1ck7_A 512 WIYSA 516 (631)
T ss_dssp EEEET
T ss_pred EEECC
Confidence 88885
No 279
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=39.78 E-value=2.7e+02 Score=26.93 Aligned_cols=73 Identities=10% Similarity=-0.047 Sum_probs=43.7
Q ss_pred CCeEEEEccccC----CcCCCcEEEEECCCCeE-EEEeeCCCCCCCCCccEEEEECCcE-EEEEecCCCCcCCCcEEEEE
Q 010034 86 DCHMFIFGGRFG----SRRLGDFWVLDTDIWQW-SELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLD 159 (519)
Q Consensus 86 ~~~iyv~GG~~~----~~~~~dv~~yd~~t~~W-~~~~~~g~~P~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd 159 (519)
++++|+...... ....++++++|+.+++- ..++ .+..-++++.-.+++ +++.+... .+++..+|
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~------~g~~p~~i~~s~Dg~~~l~v~~~~----~~~V~ViD 347 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS------LGHDVDAISVAQDGGPDLYALSAG----TEVLHIYD 347 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE------CCCCcCeEEECCCCCeEEEEEcCC----CCeEEEEE
Confidence 578999754221 11346799999998765 3332 333345566655555 44443321 26799999
Q ss_pred CCCCcEEEe
Q 010034 160 TISLEWMQL 168 (519)
Q Consensus 160 ~~t~~W~~l 168 (519)
+.+.+=...
T Consensus 348 ~~t~~vv~~ 356 (373)
T 2mad_H 348 AGAGDQDQS 356 (373)
T ss_pred CCCCCEEee
Confidence 988775543
No 280
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=39.61 E-value=2.8e+02 Score=27.15 Aligned_cols=18 Identities=22% Similarity=0.279 Sum_probs=14.9
Q ss_pred cceEEEEECCcEEEEEcC
Q 010034 21 SGHSAVNIGKSKVVVFGG 38 (519)
Q Consensus 21 ~gh~~~~~~~~~lyv~GG 38 (519)
..|++++..++.||.+|-
T Consensus 188 ~~hs~alt~~G~v~~wG~ 205 (423)
T 3mvd_K 188 ADHLVILTTAGKVFTVGC 205 (423)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEecCCeEEEeeC
Confidence 458888888899999994
No 281
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=39.59 E-value=3.2e+02 Score=28.69 Aligned_cols=66 Identities=11% Similarity=0.017 Sum_probs=31.9
Q ss_pred cEEEEECCCCe---EEEEeeCCCCC-CCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEE----CCCCcEEEec
Q 010034 103 DFWVLDTDIWQ---WSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD----TISLEWMQLP 169 (519)
Q Consensus 103 dv~~yd~~t~~---W~~~~~~g~~P-~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd----~~t~~W~~l~ 169 (519)
+++++|+.+++ |..+.....+. ........+.-.++++++.... .......++.+| +.+.++..+.
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred EEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEE
Confidence 68889988765 22332100000 1111122223355676655321 112235689999 8777665543
No 282
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=39.42 E-value=3.1e+02 Score=27.50 Aligned_cols=189 Identities=17% Similarity=0.250 Sum_probs=94.0
Q ss_pred CCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEE-------CCCCcEEEeccCCCCCCcccCee
Q 010034 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD-------TISLEWMQLPVTGSVPPPRCGHT 182 (519)
Q Consensus 110 ~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd-------~~t~~W~~l~~~~~~p~~r~~~~ 182 (519)
....|+.-. .+..|..-.-|+-|.+.+ .-|++|=.+++..-..+-.+- +....=+.++ ...-..-+..+
T Consensus 268 ~~spW~~t~-L~~i~~vTe~HSFa~i~~-~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~--sey~~~AsEPC 343 (670)
T 3ju4_A 268 HKSPWRKTD-LGLIPSVTEVHSFATIDN-NGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIP--SEYEPDASEPC 343 (670)
T ss_dssp TTSCCEEEE-CCSCTTCSEEEEEEECSS-SCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECC--GGGCTTEEEEE
T ss_pred ccCCceecc-cccccceeeeeeeeEecC-CceEEEeccCCCCcceeeEEEecccccCCcceeeeech--hhhccccccch
Confidence 455565433 234677777888898866 456777655553333332221 1112222222 11112223344
Q ss_pred EEEeCCEEEEEc-ccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCCCC----
Q 010034 183 ATMVEKRLLIYG-GRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGG---- 257 (519)
Q Consensus 183 ~~~~~~~lyv~G-G~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~~~---- 257 (519)
.-.+++.||++- |..... .. +.+.+-+.....|+.+..+...- ......+..++.||+||-....+
T Consensus 344 vkyYdgvLyLtTRgt~~~~-~G------S~L~rs~d~Gq~w~slrfp~nvH--htnlPFakvgD~l~mFgsERA~nEWE~ 414 (670)
T 3ju4_A 344 IKYYDGVLYLITRGTRGDR-LG------SSLHRSRDIGQTWESLRFPHNVH--HTTLPFAKVGDDLIMFGSERAENEWEA 414 (670)
T ss_dssp EEEETTEEEEEEEESCTTS-CC------CEEEEESSTTSSCEEEECTTCCC--SSCCCEEEETTEEEEEEECSSTTCSST
T ss_pred hhhhCCEEEEEecCcCCCC-Cc------ceeeeecccCCchhheecccccc--ccCCCcceeCCEEEEEecccccccccc
Confidence 455699999885 333322 22 23334467788999998542221 12224567899999999643211
Q ss_pred --CcccccceeCcEEEEEc-------CCCeEEEcccC---CCCCCCCcc-eEEEEeCCEEE-EEccCC
Q 010034 258 --WLSRYDIYYNDTIILDR-------LSAQWKRLPIG---NEPPPARAY-HSMTCLGSLYL-LFGGFD 311 (519)
Q Consensus 258 --~~~~~~~~~~~v~~yd~-------~t~~W~~v~~~---~~~p~~R~~-~~~v~~~~~iy-v~GG~~ 311 (519)
...++..-....+.... +.-.|..+... +.....-.+ .++|+-++.|| +|||.+
T Consensus 415 G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 415 GAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp TCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred CCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 11223333333443332 34456555432 111111222 33444467665 899965
No 283
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=37.66 E-value=2.3e+02 Score=25.53 Aligned_cols=59 Identities=10% Similarity=0.042 Sum_probs=35.2
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEECCCCeEEEE
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSEL 117 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~ 117 (519)
+.+.++|+.+++-...-... .+.. .-.+++. -+++.++.|+.++ .+.++|..+++-...
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~-------~~~~-~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQME-------QPGE-YISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRN 104 (318)
T ss_dssp TEEEEEETTTCCEEEEEECC-------STTC-CEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCCEEEEEEec-------CCCC-eEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEE
Confidence 45889999998765543210 1111 1122222 2567778887654 588899998865443
No 284
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=36.94 E-value=2.7e+02 Score=31.70 Aligned_cols=159 Identities=16% Similarity=0.109 Sum_probs=85.5
Q ss_pred cceEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe---CCeEEEEccccC
Q 010034 21 SGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFG 97 (519)
Q Consensus 21 ~gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~ 97 (519)
.|.++....++. ++|.-+...-...++.|......|..-.... ...+.....++++++. +...+|+|--.
T Consensus 335 ~GfSa~~t~d~~--~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~----~~~~~~sylGySVa~~~~~g~~~~v~GAP~- 407 (1095)
T 3k6s_A 335 EGFSAVFTPDGP--VLGAVGSFTWSGGAFLYPPNMSPTFINMSQE----NVDMRDSYLGYSTELALWKGVQSLVLGAPR- 407 (1095)
T ss_dssp TTSSEECCTTCC--EEEESCSTTTTBEEEECCSSSCCEEECCCSS----CCCCCSCCBTSSEECCCCSSSCEEEEEETT-
T ss_pred ccccceecCCcc--eEcccccCCccceeEEecCCCcceeeccccc----cccccccccceeeEEeccCCceEEEEEccc-
Confidence 455555555444 6776444444456778887665554332111 0112233345555442 23456666322
Q ss_pred CcCCCcEEEEECCCCeEEEEee-CCCCCCCCCccEEEEE---CC--cEEEEEecCCC--CcCCCcEEEEECCC--CcEEE
Q 010034 98 SRRLGDFWVLDTDIWQWSELTS-FGDLPSPRDFAAASAI---GN--RKIVMYGGWDG--KKWLSDVYVLDTIS--LEWMQ 167 (519)
Q Consensus 98 ~~~~~dv~~yd~~t~~W~~~~~-~g~~P~~r~~~~~~~~---~~--~~iyv~GG~~~--~~~~~~v~~yd~~t--~~W~~ 167 (519)
......+++|......|..... .|.-....++++.++. +| ..++++|.-.. ......++.|.-.. ..|..
T Consensus 408 ~~~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~ 487 (1095)
T 3k6s_A 408 YQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWC 487 (1095)
T ss_dssp GGGTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCS
T ss_pred ccccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceee
Confidence 2334679999988778877553 3334445667777764 12 26777774321 12335688886543 45764
Q ss_pred ecc-CCC--CCCcccCeeEEEe
Q 010034 168 LPV-TGS--VPPPRCGHTATMV 186 (519)
Q Consensus 168 l~~-~~~--~p~~r~~~~~~~~ 186 (519)
... .+. .+..|++.+++.+
T Consensus 488 ~~~l~g~~~~~~~~FG~sva~~ 509 (1095)
T 3k6s_A 488 DAVLYGEQGHPWGRFGAALTVL 509 (1095)
T ss_dssp CSSCCCCCSCSSCCBTSCEEEE
T ss_pred eEEeecccCCccccCccceEee
Confidence 321 222 1457888888764
No 285
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.26 E-value=4.4e+02 Score=28.15 Aligned_cols=87 Identities=9% Similarity=0.068 Sum_probs=51.9
Q ss_pred CCCceEEecCCCCCCCCcceeEEEEe-CCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccCCCC-CCCCcce
Q 010034 218 ETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEP-PPARAYH 295 (519)
Q Consensus 218 ~t~~W~~i~~~g~~P~~r~~~s~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~~~~-p~~R~~~ 295 (519)
...+|+.+. .+|...+.|.+++. ++.+|+..+....... ......+|+++-...+|+.+...+.. +..++++
T Consensus 230 gG~tW~~~~---~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~---~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~ 303 (737)
T 2cn3_A 230 GGVTWKAVP---GQPKGLLPHHGVLASNGMLYITYGDTCGPYD---GNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCF 303 (737)
T ss_dssp TTSCCEECT---TCCCSSEEEEEEECTTSEEEEEEESSCCSSC---CSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEE
T ss_pred CCCceEECC---CCCCcccceEEEECCCCeEEEEecCCCCccc---cccCceEEEEeCCCCCEEEccCCCCCCccccccc
Confidence 456899987 55655555555543 7788887653221000 00234689999999999998764321 1234555
Q ss_pred EEEEe----CCEEEEEccC
Q 010034 296 SMTCL----GSLYLLFGGF 310 (519)
Q Consensus 296 ~~v~~----~~~iyv~GG~ 310 (519)
+.+.+ .+.+|+.+..
T Consensus 304 ~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 304 AGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp EEEEECTTCTTCEEEEEEC
T ss_pred ccEEEcCCCCCEEEEEecc
Confidence 54444 2678877653
No 286
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=34.41 E-value=2.8e+02 Score=25.63 Aligned_cols=171 Identities=11% Similarity=0.095 Sum_probs=86.7
Q ss_pred ceEEEEECCcEEEEEcCcCCCccCCcEEEEEcC--CCcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCc
Q 010034 22 GHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDID--NKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSR 99 (519)
Q Consensus 22 gh~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~--~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~ 99 (519)
.|++++. ++.||.+|--..++ +.- |. ......+.. -..|++++.++++|.+|-.....
T Consensus 34 ~h~~~l~-~G~v~~wG~n~~Gq-lg~-----p~~~~~~i~~ia~-------------G~~hs~~l~~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 34 FHGLALK-GGKVLGWGANLNGQ-LTM-----PAATQSGVDAIAA-------------GNYHSLALKDGEVIAWGGNEDGQ 93 (282)
T ss_dssp SEEEEEE-TTEEEEEECCSSST-TSC-----CGGGGSCCCEEEE-------------CSSEEEEEETTEEEEEECCTTST
T ss_pred CeEEEEE-CCEEEEEeCCCCCC-CCC-----CccCCCCEEEEEe-------------CCCEEEEEECCEEEEeeCCCCCC
Confidence 4777776 79999999533222 210 00 111222221 23577777789999998643221
Q ss_pred CC--CcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCc
Q 010034 100 RL--GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (519)
Q Consensus 100 ~~--~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~ 177 (519)
.- ..+ ......+.. -..|+++.. ++++|..|--.... +. + -.........+. .
T Consensus 94 lg~P~~~------~~~v~~ia~-------G~~hs~al~-~G~v~~wG~n~~gq-lg-~--~~~~~~~i~~i~-------~ 148 (282)
T 3qhy_B 94 TTVPAEA------RSGVDAIAA-------GAWASYALK-DGKVIAWGDDSDGQ-TT-V--PAEAQSGVTALD-------G 148 (282)
T ss_dssp TCCCGGG------SSSEEEEEE-------ETTEEEEEE-TTEEEEEECCTTST-TS-C--CGGGGSSEEEEE-------E
T ss_pred CCCCccc------CCCeEEEEC-------cCCEEEEEe-CCeEEEecCCCCCc-CC-C--CccCCCCeEEEE-------c
Confidence 10 000 113344432 235777777 88999998532211 10 0 000112234443 1
Q ss_pred ccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEEeCCEEEEEeccCC
Q 010034 178 RCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGT 255 (519)
Q Consensus 178 r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~~~~~iyv~GG~~~ 255 (519)
-..|+++.-++.+|.+|-..... .. +. .........+.. ...|++++.++++|.+|-...
T Consensus 149 G~~~~~~l~~G~v~~wG~n~~gq-lg-----~p-----~~~~~~v~~i~~-------G~~hs~al~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 149 GVYTALAVKNGGVIAWGDNYFGQ-TT-----VP-----AEAQSGVDDVAG-------GIFHSLALKDGKVIAWGDNRY 208 (282)
T ss_dssp CSSEEEEEETTEEEEEECCTTST-TS-----CC-----GGGGSSEEEEEE-------CSSEEEEEETTEEEEEECCTT
T ss_pred ccCEEEEEECCEEEEecCCCCCC-CC-----Cc-----eecCCCeEEEEe-------cCCEEEEEECCeEEEEECCCC
Confidence 23466666689999998643221 10 00 001123444441 234666667899999996443
No 287
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=34.20 E-value=2.8e+02 Score=29.84 Aligned_cols=102 Identities=10% Similarity=0.026 Sum_probs=55.7
Q ss_pred CcEEEEEcCC--CcEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccC-----CcCCCcEEEEECCC-------
Q 010034 46 SDVVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG-----SRRLGDFWVLDTDI------- 111 (519)
Q Consensus 46 ~~~~~yd~~~--~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~-----~~~~~dv~~yd~~t------- 111 (519)
+++|..|... ..|..+. .|+........++++|+....+. .-.-..+...|+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~l~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 336 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN------------MPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESD 336 (711)
T ss_dssp EEEEEEECSSSSCEEEECC------------SCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGG
T ss_pred eeEEEEcCCCCCCcceEee------------cCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccc
Confidence 5666666543 4566652 22222223456889999764331 11345688898764
Q ss_pred -CeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCcEE
Q 010034 112 -WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (519)
Q Consensus 112 -~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~ 166 (519)
..|+.+- .|.....-..+...++.+|+..-.++ ...++++|+.+++|.
T Consensus 337 ~~~~~~~~----~~~~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 337 KTSLKILF----TPTANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWT 385 (711)
T ss_dssp CTTCEEEE----CCCTTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEEC
T ss_pred cccceEEE----CCCCCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceE
Confidence 3688743 22222222233333346766543332 345888998888874
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=32.89 E-value=3.7e+02 Score=26.52 Aligned_cols=110 Identities=14% Similarity=0.119 Sum_probs=61.6
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeCC-eEEEEccccCCcCCCcEEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~~~~~dv~~yd 108 (519)
++.||+.--. +.+.++|+..+....+.. ...+-.+.++.-++ .||+.....+ .....+..++
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~----------~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~ 211 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS----------GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILT 211 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC----------CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEE
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec----------CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEe
Confidence 4678886531 678999999988777642 22223333333344 4888854322 1222456666
Q ss_pred CCCCeEE---EEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCcEEEe
Q 010034 109 TDIWQWS---ELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (519)
Q Consensus 109 ~~t~~W~---~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l 168 (519)
... .|. .+. .+. .-+.+++.. ++.||+.--. ...+++||+.+..-..+
T Consensus 212 ~~g-~~~~~~~l~---~~~---~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 212 RES-GFKVITELT---KGQ---NCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GGG-TSCSEEEEE---ECS---SCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEE
T ss_pred CCC-ceeeeeeec---cCC---CceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEE
Confidence 543 232 232 122 224555554 6788887422 24599999988765444
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=32.37 E-value=2.6e+02 Score=29.13 Aligned_cols=77 Identities=16% Similarity=0.080 Sum_probs=46.2
Q ss_pred CCcEEEEEcCCCc--EEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCe--EEEEeeC
Q 010034 45 LSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSF 120 (519)
Q Consensus 45 ~~~~~~yd~~~~~--W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~--W~~~~~~ 120 (519)
...+..+|+.+++ |+... +.+..+...+..++.+|+ |..+ ..++.||..|++ |+...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-----------~~~~~~g~~~tagglvf~-g~~d-----g~l~A~D~~tG~~lW~~~~-- 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-----------HLPLWAGVLATAGNLVFT-GTGD-----GYFKAFDAKSGKELWKFQT-- 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-----------SSCCCSCCEEETTTEEEE-ECTT-----SEEEEEETTTCCEEEEEEC--
T ss_pred cceEEEEECCCCCEEEEecC-----------CCCCcccceEeCCCEEEE-ECCC-----CcEEEEECCCCCEEEEecC--
Confidence 3568999998875 87743 223334444555777776 4322 358999998875 76543
Q ss_pred CCCCCCCCccEEEEECCcEEEEE
Q 010034 121 GDLPSPRDFAAASAIGNRKIVMY 143 (519)
Q Consensus 121 g~~P~~r~~~~~~~~~~~~iyv~ 143 (519)
|.+.....++...+++.||.
T Consensus 526 ---~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 526 ---GSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ---SSCCCSCCEEEEETTEEEEE
T ss_pred ---CCCcccCceEEEECCEEEEE
Confidence 33333333443245677776
No 290
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=32.21 E-value=3.4e+02 Score=25.93 Aligned_cols=25 Identities=12% Similarity=0.215 Sum_probs=15.7
Q ss_pred ECCcEEEEEcCcCCCccCCcEEEEEcCCCc
Q 010034 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKL 57 (519)
Q Consensus 28 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 57 (519)
..++.+++.|+.+ ..+.+||+.+..
T Consensus 37 s~~g~~la~g~~d-----g~v~iw~~~~~~ 61 (447)
T 3dw8_B 37 NHSGELLATGDKG-----GRVVIFQQEQEN 61 (447)
T ss_dssp CSSSSEEEEEETT-----SEEEEEEECC--
T ss_pred CCCCCEEEEEcCC-----CeEEEEEecCCC
Confidence 3456777888754 357788877654
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=31.81 E-value=4.9e+02 Score=27.65 Aligned_cols=151 Identities=13% Similarity=0.022 Sum_probs=77.9
Q ss_pred eCCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEE-CCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
.+++||+.-. ..+.+.++|+....-..+... .+..|+ +.++. .++.||+.-- .....++++++...
T Consensus 463 ~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~-~~~~P~---giavDp~~g~ly~td~----~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 463 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRE-QGSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGV 529 (699)
T ss_dssp SSSBCEECCT-----TTSCEEEEBSSSCCEEEECCC-SSCCCC---CEECCSSSSCCEECCC----SSSCCEEBCCSSSC
T ss_pred eCCcEEEEec-----cCCeEEEEecCCCceEEEEeC-CCCCcc---eEEEccCCCcEEEccc----CCCCeEEEEeCCCC
Confidence 4678888632 224689999887654444321 122222 23332 2457887531 11245788776644
Q ss_pred cEEEeccCCCCCCcccCeeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEecC-CCCCCCCcceeEE
Q 010034 164 EWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKL-PGQAPSSRCGHTI 240 (519)
Q Consensus 164 ~W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~-~g~~P~~r~~~s~ 240 (519)
.-+.+. ...+..| .++++- +++||+.-.. .+.|+++|++...-..+.. .+.++ ...++
T Consensus 530 ~~~~l~-~~~l~~P---nGlavd~~~~~LY~aD~~------------~~~I~~~d~dG~~~~~~~~~~~~~~---~P~gl 590 (699)
T 1n7d_A 530 DIYSLV-TENIQWP---NGITLDLLSGRLYWVDSK------------LHSISSIDVNGGNRKTILEDEKRLA---HPFSL 590 (699)
T ss_dssp CCCEES-CSSCSSC---CCEEECTTTCCEEEEETT------------TTEEEEECSSSSCCEEECCCSSSCS---SCCCC
T ss_pred CeeEEE-eCCCCCc---cEEEEeccCCEEEEEecC------------CCeEEEEccCCCceEEEEecCCcCC---CceEe
Confidence 333332 1112112 234443 5788886421 1456667776544444431 11122 22355
Q ss_pred EEeCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCeE
Q 010034 241 TSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQW 279 (519)
Q Consensus 241 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W 279 (519)
++.++.||+.-.. .+.|.++|+.+.+-
T Consensus 591 avd~~~lywtd~~------------~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 591 AVFEDKVFWTDII------------NEAIFSANRLTGSD 617 (699)
T ss_dssp EEETTEEEEECST------------TTCEEEEETTTEEE
T ss_pred EEECCEEEEEeCC------------CCeEEEEEccCCCc
Confidence 6677888887632 25688999765543
No 292
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=31.13 E-value=4.4e+02 Score=27.52 Aligned_cols=78 Identities=8% Similarity=-0.016 Sum_probs=39.8
Q ss_pred CCeEEEEccccCCcCCCcEEEEE----CCCCeEEEEee---CCCCCCCCCc---c-EEEEECCc-EEEEE-ecCCCCcCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLD----TDIWQWSELTS---FGDLPSPRDF---A-AASAIGNR-KIVMY-GGWDGKKWL 152 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd----~~t~~W~~~~~---~g~~P~~r~~---~-~~~~~~~~-~iyv~-GG~~~~~~~ 152 (519)
++++++... +.......++++| +.++++..+.. . .+..... + ..+...++ .+++. ...++ .
T Consensus 263 D~~~~~~~~-~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~ 336 (719)
T 1z68_A 263 DERVCLQWL-KRVQNVSVLSICDFREDWQTWDCPKTQEHIEE--SRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---Y 336 (719)
T ss_dssp SSEEEEEEE-ESSTTEEEEEEEEECSSSSSEECCGGGEEEEE--CSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---C
T ss_pred CCeEEEEEe-ccccCeEEEEEEcccCCCCCCceEEEEecccc--cCCceEccccCCccEECCCCCeEEEEEEccCC---c
Confidence 566655422 2222234689999 87776654431 0 1111111 1 22333344 44443 33333 4
Q ss_pred CcEEEEECCCCcEEEec
Q 010034 153 SDVYVLDTISLEWMQLP 169 (519)
Q Consensus 153 ~~v~~yd~~t~~W~~l~ 169 (519)
..++.+|+.+.+...+.
T Consensus 337 ~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 337 KHIHYIKDTVENAIQIT 353 (719)
T ss_dssp EEEEEESSCSTTCEECS
T ss_pred eEEEEEECCCCceEecc
Confidence 56999999888876664
No 293
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=30.93 E-value=3.3e+02 Score=26.52 Aligned_cols=79 Identities=11% Similarity=0.013 Sum_probs=47.2
Q ss_pred cceEEEEE-CCcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCC-C-CCCCCcceeEEEEe-CCeEEEEcccc
Q 010034 21 SGHSAVNI-GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNG-Q-VGPGPRAFHIAVAI-DCHMFIFGGRF 96 (519)
Q Consensus 21 ~gh~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~-~-~~p~~R~~h~~~~~-~~~iyv~GG~~ 96 (519)
.-.+++.. .++++|+|=| +..|+||..+++-.. +-+..- . =+..+..-.+++.. ++++|+|=|
T Consensus 274 ~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~----gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg-- 340 (365)
T 3ba0_A 274 KIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDP----GYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG-- 340 (365)
T ss_dssp CCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECS----SCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET--
T ss_pred CcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecC----CCCcchhhcCCCCCCccceeeEecCCcEEEEeC--
Confidence 34455554 3579999987 568999987653211 000000 0 01122223444445 789999977
Q ss_pred CCcCCCcEEEEECCCCeEEEE
Q 010034 97 GSRRLGDFWVLDTDIWQWSEL 117 (519)
Q Consensus 97 ~~~~~~dv~~yd~~t~~W~~~ 117 (519)
+..|+||..+.+-...
T Consensus 341 -----~~ywr~d~~~~~v~~~ 356 (365)
T 3ba0_A 341 -----SNQFEYDFLLQRITKT 356 (365)
T ss_dssp -----TEEEEEETTTTEEEEE
T ss_pred -----CEEEEEECCccEEecc
Confidence 4589999998877654
No 294
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=29.72 E-value=3.5e+02 Score=28.45 Aligned_cols=55 Identities=18% Similarity=0.160 Sum_probs=34.9
Q ss_pred CCcEEEEECCCCeEEE-EeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEECCCC
Q 010034 101 LGDFWVLDTDIWQWSE-LTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 101 ~~dv~~yd~~t~~W~~-~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
.+.+-+.|+.+.+.+. +. ..|.+..-|++.+-.+| ++|+-+.. .+.+..||+.+.
T Consensus 253 i~~V~VID~~~~~~~~~~~---~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~ 309 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTR---YIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRF 309 (595)
T ss_dssp ETTEEEEECSGGGCCSSEE---EEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGH
T ss_pred ECcEEEEeCcccCCceeEE---EEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECccc
Confidence 4668899998833222 11 24455566777777665 56665543 456899998865
No 295
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=28.51 E-value=3.6e+02 Score=25.01 Aligned_cols=64 Identities=5% Similarity=-0.027 Sum_probs=36.0
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCC
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 163 (519)
++.+++.|+.++ .+.++|+.+++....-. .+.. .-.+++...++..++.||.++. +..||+...
T Consensus 87 ~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~---~h~~-~v~~v~~sp~~~~l~s~~~d~~-----i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWDK-----TLRLWDLRTGTTYKRFV---GHQS-EVYSVAFSPDNRQILSAGAERE-----IKLWNILGE 150 (343)
T ss_dssp STTEEEEEETTS-----EEEEEETTSSCEEEEEE---CCCS-CEEEEEECSSTTEEEEEETTSC-----EEEEESSSC
T ss_pred CCCEEEEEcCCC-----cEEEEECCCCcEEEEEc---CCCC-cEEEEEECCCCCEEEEEcCCCE-----EEEEeccCC
Confidence 456666776553 58899998876433221 1111 1223333345566677776543 777887643
No 296
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=27.62 E-value=3.9e+02 Score=25.09 Aligned_cols=23 Identities=22% Similarity=0.136 Sum_probs=14.6
Q ss_pred cEEEEEcCcCCCccCCcEEEEEcCCCcE
Q 010034 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLW 58 (519)
Q Consensus 31 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W 58 (519)
+.+.+.||.+ ..+.++|..+++-
T Consensus 71 ~~~~~~~~~d-----~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 71 NYVAFVTGVK-----EVVHIWDDVKKQD 93 (355)
T ss_dssp SEEEEECSST-----TEEEEEETTTTEE
T ss_pred CEEEEEECCc-----cEEEEEECCCCcE
Confidence 4555666533 2688889887754
No 297
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=27.20 E-value=7.3e+02 Score=28.14 Aligned_cols=186 Identities=14% Similarity=0.074 Sum_probs=97.1
Q ss_pred eeEEEEeCCeEEEEccccCCcCCCcEEEEECCCCeEEEEee--CCCCCCCCCccEEEEE--CCcEEEEEecCCCCcCCCc
Q 010034 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTS--FGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSD 154 (519)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~--~g~~P~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~ 154 (519)
++++....+.+ ++|.-........++.|+.....|-.-.+ .+.+.....+++.++. .+...||+|--. ......
T Consensus 336 GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~-~~~~G~ 413 (1095)
T 3k6s_A 336 GFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR-YQHTGK 413 (1095)
T ss_dssp TSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT-GGGTCE
T ss_pred cccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc-ccccce
Confidence 44555555555 78866555555668888876554432221 1123344456666552 223456776322 223456
Q ss_pred EEEEECCCCcEEEec-cCCCCCCcccCeeEEEe--C----CEEEEEcccCCCCCcccccccccccccccCCC--CceEEe
Q 010034 155 VYVLDTISLEWMQLP-VTGSVPPPRCGHTATMV--E----KRLLIYGGRGGGGPIMGDLWALKGLIEEENET--PGWTQL 225 (519)
Q Consensus 155 v~~yd~~t~~W~~l~-~~~~~p~~r~~~~~~~~--~----~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t--~~W~~i 225 (519)
+++|......|.... ..|.-.....|.+++.. | .-++++|.-..... . .-..++.|.... ..|...
T Consensus 414 V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~--~---~~G~Vyvy~~~~~~~~~~~~ 488 (1095)
T 3k6s_A 414 AVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQ--T---RGGQVSVCPLPRGWRRWWCD 488 (1095)
T ss_dssp EEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSS--C---CCBCEEEEECCSSTTCCCSC
T ss_pred EEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCc--C---CCCEEEEEEeCCCCcceeee
Confidence 899988888888765 24444556777777764 1 24666664322110 0 113344553322 457643
Q ss_pred c-CCCC--CCCCcceeEEEEeCC-------EEEEEeccCCCCCcccccceeCcEEEEEcCCC-eE
Q 010034 226 K-LPGQ--APSSRCGHTITSGGH-------YLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA-QW 279 (519)
Q Consensus 226 ~-~~g~--~P~~r~~~s~~~~~~-------~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~-~W 279 (519)
. ..|. .+..|++.+++..++ -|+| |.-..+ .....+|+|.-... .|
T Consensus 489 ~~l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl~V-GAP~~~-------~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 489 AVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVI-GAPGEE-------ENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp SSCCCCCSCSSCCBTSCEEEEECSSSSSCCEEEE-ECTTTT-------TSCCBEEEEEBCSSSCB
T ss_pred EEeecccCCccccCccceEeecccCCCCCcCEEE-eCCcCC-------CCCCEEEEecCCCCCCc
Confidence 2 1222 146788887765311 3543 321111 13467899987655 45
No 298
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=26.88 E-value=4.4e+02 Score=28.29 Aligned_cols=151 Identities=13% Similarity=0.036 Sum_probs=77.4
Q ss_pred CCcEEEEECCC--CeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCC-----CcCCCcEEEEECCC--------CcE
Q 010034 101 LGDFWVLDTDI--WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDG-----KKWLSDVYVLDTIS--------LEW 165 (519)
Q Consensus 101 ~~dv~~yd~~t--~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~t--------~~W 165 (519)
.+.++..|... ..|.++. .|.. ...+...++++|+....+- .-....+...|+.+ ..|
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKIN----MPSD---ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSL 340 (711)
T ss_dssp CEEEEEEECSSSSCEEEECC----SCTT---CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTC
T ss_pred ceeEEEEcCCCCCCcceEee----cCCc---ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccc
Confidence 36778888653 6777764 3332 2222233458999765431 11345688888765 468
Q ss_pred EEeccCCCCCCcccCeeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEec-CCCCCCCCcceeEEEE--
Q 010034 166 MQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK-LPGQAPSSRCGHTITS-- 242 (519)
Q Consensus 166 ~~l~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~-~~g~~P~~r~~~s~~~-- 242 (519)
+.+-+ +- ..+.--.+...++.+++..-... ...+..+|+.++.|.... . .+|.... .+...
T Consensus 341 ~~~~~--~~-~~~~l~~~~~~~~~l~~~~~~~~----------~~~l~~~~~~~g~~~~~~~i--~lp~~~~-~~~~~~~ 404 (711)
T 4hvt_A 341 KILFT--PT-ANEVFNFISTTKDRVFLATYDNV----------VAKVVTFTLENEQWTKPVVL--KLPYQNA-IFGMSSY 404 (711)
T ss_dssp EEEEC--CC-TTEEEEEEEECSSCEEEEEEETT----------EEEEEEECEETTEECCCEEE--CCCSTTC-EEEEECC
T ss_pred eEEEC--CC-CCCeEEEEEEECCEEEEEEEECC----------EEEEEEEECCCCceEEEecc--CCCCCeE-EEEEeec
Confidence 87421 11 12222233344667776543221 245667788888774321 1 2332211 12111
Q ss_pred -eCCEEE-EEeccCCCCCcccccceeCcEEEEEcCCCeEEEcccC
Q 010034 243 -GGHYLL-LFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (519)
Q Consensus 243 -~~~~iy-v~GG~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~ 285 (519)
.++.++ .+.+.. .-..++.||+. .+++.+...
T Consensus 405 ~~~~~~~~~~ss~~----------~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 405 EEEEEALITIENSI----------VPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp TTCSCEEEEEECSS----------SCCEEEEECTT-SCEEEEECC
T ss_pred CcCCEEEEEEecCC----------CCCEEEEEeCC-CcEEEEecC
Confidence 223333 334333 23578899987 777766554
No 299
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.51 E-value=2.8e+02 Score=29.73 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=46.9
Q ss_pred CeEEEEeeCCCCCCCCCccEEEEECCcEEEEEecCCCC----cCCCcEEEEECCCCcEEEeccCCCCCC----cccCeeE
Q 010034 112 WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGK----KWLSDVYVLDTISLEWMQLPVTGSVPP----PRCGHTA 183 (519)
Q Consensus 112 ~~W~~~~~~g~~P~~r~~~~~~~~~~~~iyv~GG~~~~----~~~~~v~~yd~~t~~W~~l~~~~~~p~----~r~~~~~ 183 (519)
.+|+.+. .+|.....|.++.-.++.+|+..+.... .....+++++-...+|+.+.. .|. .+++++.
T Consensus 232 ~tW~~~~---~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~---~~~~~~~~~~~~~~ 305 (737)
T 2cn3_A 232 VTWKAVP---GQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITP---IPYSSSDNRFCFAG 305 (737)
T ss_dssp SCCEECT---TCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCS---SCTTSTTCCSEEEE
T ss_pred CceEECC---CCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccC---CCCCCccccccccc
Confidence 4687765 4555444344443336688887543211 134569999999999999973 332 2444443
Q ss_pred EEe----CCEEEEEccc
Q 010034 184 TMV----EKRLLIYGGR 196 (519)
Q Consensus 184 ~~~----~~~lyv~GG~ 196 (519)
+.+ .+.||+.+..
T Consensus 306 i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 306 LAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp EEECTTCTTCEEEEEEC
T ss_pred EEEcCCCCCEEEEEecc
Confidence 443 3578887653
No 300
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=26.33 E-value=4e+02 Score=24.78 Aligned_cols=206 Identities=11% Similarity=-0.009 Sum_probs=108.0
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEECCC----CeEEEEee
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDI----WQWSELTS 119 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd~~t----~~W~~~~~ 119 (519)
+++.++|+.+.....+. +....-++.+.. +++||+.-.. ...++++|+.+ ..-..+..
T Consensus 10 ~~I~~i~~~~~~~~~~~-----------~~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI-----------PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp SSEEEEETTSCCCEEEE-----------CSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEEC
T ss_pred CeEEEEECCCcceEehh-----------cCCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEe
Confidence 46888999888766653 112223455554 5689988442 24689999876 22222221
Q ss_pred CCCCCCCCCccEEEEE-CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe--CCEEEEEccc
Q 010034 120 FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGR 196 (519)
Q Consensus 120 ~g~~P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 196 (519)
..+..+ .++++. .++.||+.-.. .+.+.++|+....-+.+.. ..+..| ..+++. ++.||+..-.
T Consensus 74 -~~~~~p---~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~-~~~~~P---~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 74 -RDIQAP---DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFR-ENGSKP---RAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp -SSCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEE-CTTCCE---EEEEEETTTTEEEEEECS
T ss_pred -CCCCCc---CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEE-CCCCCc---ceEEeCCCCCEEEEEccC
Confidence 112222 344443 35689987432 3468889987654443321 122223 233343 6789987521
Q ss_pred CCCCCcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEc
Q 010034 197 GGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDR 274 (519)
Q Consensus 197 ~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~ 274 (519)
. -..+++++++...-+.+... .. ..-.++++ .+++||+.-. ..+.|+++|+
T Consensus 141 ~-----------~~~I~~~~~dG~~~~~~~~~-~~---~~P~gla~d~~~~~lY~~D~------------~~~~I~~~d~ 193 (316)
T 1ijq_A 141 T-----------PAKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVDS------------KLHSISSIDV 193 (316)
T ss_dssp S-----------SCEEEEEETTSCCEEEEECS-SC---SCEEEEEEETTTTEEEEEET------------TTTEEEEEET
T ss_pred C-----------CCeEEEEcCCCCCeEEEEEC-CC---CCceEEEEeccCCEEEEEEC------------CCCeEEEEec
Confidence 1 13455667665444433211 11 12234444 4679998653 2357899998
Q ss_pred CCCeEEEcccCCCCCCCCcceEEEEeCCEEEEEcc
Q 010034 275 LSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (519)
Q Consensus 275 ~t~~W~~v~~~~~~p~~R~~~~~v~~~~~iyv~GG 309 (519)
+...-+.+.... .....-.++++.++.+|+.--
T Consensus 194 dg~~~~~~~~~~--~~~~~P~giav~~~~ly~~d~ 226 (316)
T 1ijq_A 194 NGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTDI 226 (316)
T ss_dssp TSCSCEEEEECT--TTTSSEEEEEEETTEEEEEET
T ss_pred CCCceEEEeecC--CccCCcEEEEEECCEEEEEEC
Confidence 754433333211 112233566667889998753
No 301
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=24.37 E-value=4.8e+02 Score=25.10 Aligned_cols=203 Identities=10% Similarity=-0.064 Sum_probs=109.1
Q ss_pred CcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEe--CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC
Q 010034 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (519)
Q Consensus 46 ~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~ 123 (519)
+.+.++++.......+.. ....-.+.+.. ++.||+.-- ....++++++.....+.+... .+
T Consensus 96 ~~I~~i~~~~~~~~~~~~-----------~~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~-~~ 158 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLN-----------NLENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVST-GL 158 (386)
T ss_dssp SCEEEECTTSCCCEEEEC-----------SCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECS-SC
T ss_pred ccceeeccCCCcEEEEec-----------CCCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeC-CC
Confidence 467778877766655431 11223444443 578888732 224689999988776665421 12
Q ss_pred CCCCCccEEEEE-CCcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCCCcccCeeEEEe--CCEEEEEcccCCCC
Q 010034 124 PSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGG 200 (519)
Q Consensus 124 P~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~ 200 (519)
..+ .+.++. .++.||+.-.. .+.++++++....-+.+. ...+..| ..+++. ++.||+.--..
T Consensus 159 ~~p---~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~-~~~l~~P---~giavdp~~g~ly~td~~~--- 223 (386)
T 3v65_B 159 ESP---GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLL-WQSLEKP---RAIALHPMEGTIYWTDWGN--- 223 (386)
T ss_dssp SCC---CCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCEEEE-CSSCSCE---EEEEEETTTTEEEEEECSS---
T ss_pred CCc---cEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEee-cCCCCCC---cEEEEEcCCCeEEEeccCC---
Confidence 222 233443 35689987532 235788887755433332 1122223 233343 57888863211
Q ss_pred CcccccccccccccccCCCCceEEecCCCCCCCCcceeEEEE--eCCEEEEEeccCCCCCcccccceeCcEEEEEcCCCe
Q 010034 201 PIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (519)
Q Consensus 201 ~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~r~~~s~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~v~~yd~~t~~ 278 (519)
...+++++++...-+.+... .+. .-.++++ .+++||+.-. ..+.|+++|++...
T Consensus 224 --------~~~I~r~~~dG~~~~~~~~~-~~~---~PnGlavd~~~~~lY~aD~------------~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 224 --------TPRIEASSMDGSGRRIIADT-HLF---WPNGLTIDYAGRRMYWVDA------------KHHVIERANLDGSH 279 (386)
T ss_dssp --------SCEEEEEETTSCSCEEEECS-SCS---CEEEEEEEGGGTEEEEEET------------TTTEEEEECTTSCS
T ss_pred --------CCEEEEEeCCCCCcEEEEEC-CCC---CeeeEEEeCCCCEEEEEEC------------CCCEEEEEeCCCCe
Confidence 13456667766544444311 111 1123444 5789999753 23678999987543
Q ss_pred EEEcccCCCCCCCCcceEEEEeCCEEEEEc
Q 010034 279 WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (519)
Q Consensus 279 W~~v~~~~~~p~~R~~~~~v~~~~~iyv~G 308 (519)
-+.+.... ...-.++++.++.+|+.-
T Consensus 280 ~~~~~~~~----~~~P~giav~~~~ly~td 305 (386)
T 3v65_B 280 RKAVISQG----LPHPFAITVFEDSLYWTD 305 (386)
T ss_dssp CEEEECSS----CSSEEEEEEETTEEEEEE
T ss_pred eEEEEECC----CCCceEEEEECCEEEEee
Confidence 33332211 123356666888999875
No 302
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=23.84 E-value=6e+02 Score=25.99 Aligned_cols=66 Identities=3% Similarity=-0.084 Sum_probs=37.2
Q ss_pred CCeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCCCCCCC-ccEEEEECCcEEEEEecCCCCcCCCcEEEEECCCCc
Q 010034 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (519)
Q Consensus 86 ~~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~ 164 (519)
+++.++.|+.++ .+.++|+.+.+....-. .+.... ....+.. ++..++.++.++ .+..+|+.+.+
T Consensus 250 dg~~l~s~s~D~-----~v~lWd~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~l~s~s~d~-----~i~~~~~~~~~ 315 (611)
T 1nr0_A 250 DGTKIASASADK-----TIKIWNVATLKVEKTIP---VGTRIEDQQLGIIW-TKQALVSISANG-----FINFVNPELGS 315 (611)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCSSGGGCEEEEEE-CSSCEEEEETTC-----CEEEEETTTTE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCceeeeec---CCCCccceeEEEEE-cCCEEEEEeCCC-----cEEEEeCCCCC
Confidence 567777777553 58899999887755432 111111 1122233 334555665544 37778887765
Q ss_pred E
Q 010034 165 W 165 (519)
Q Consensus 165 W 165 (519)
-
T Consensus 316 ~ 316 (611)
T 1nr0_A 316 I 316 (611)
T ss_dssp E
T ss_pred c
Confidence 3
No 303
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=23.61 E-value=6.4e+02 Score=26.24 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=41.9
Q ss_pred EEEEEcCcCCCccCCcEEEEEcCC-----CcEEeeeecCCCCCCCCCCCCcceeEEEEeC-C-eEEEE-ccccCCcCCCc
Q 010034 32 KVVVFGGLVDKRFLSDVVVYDIDN-----KLWFQPECTGNGSNGQVGPGPRAFHIAVAID-C-HMFIF-GGRFGSRRLGD 103 (519)
Q Consensus 32 ~lyv~GG~~~~~~~~~~~~yd~~~-----~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~-~-~iyv~-GG~~~~~~~~d 103 (519)
+.+++||+..+. ..++.+|+.. -.|+.-.. + .+.+...-..-..+.+. + -+.|| +|++.......
T Consensus 152 rtvLvggmg~GG--~~~yALDVT~P~~p~~LWe~~~~-~----~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~ 224 (570)
T 3hx6_A 152 HTVLIGSLRAGG--KGLFALDVTDPANIKLLWEIGVD-Q----EPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAA 224 (570)
T ss_dssp EEEEEEECTTSC--SEEEEEECSSGGGCEEEEEEETT-T----CTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEE
T ss_pred eEEEEEecCCCC--cEEEEEECCCCCCCceeEEECCC-C----ccccCccccCCEEEEecCCCEEEEEccccCCCCCccE
Confidence 678888876433 2578888765 34665411 0 11222222233344442 2 34444 56665444567
Q ss_pred EEEEECCCCeE
Q 010034 104 FWVLDTDIWQW 114 (519)
Q Consensus 104 v~~yd~~t~~W 114 (519)
++++|..++.-
T Consensus 225 Lyv~d~~tG~l 235 (570)
T 3hx6_A 225 LLIIDMETGAI 235 (570)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCce
Confidence 99999998864
No 304
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=22.51 E-value=3.1e+02 Score=26.05 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=40.2
Q ss_pred CCeEEEEccccC-----CcCCCcEEEEECCCCeEEEEeeCCCCCCCCCccEEEEECCc-EEEEEecCCCCcCCCcEEEEE
Q 010034 86 DCHMFIFGGRFG-----SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLD 159 (519)
Q Consensus 86 ~~~iyv~GG~~~-----~~~~~dv~~yd~~t~~W~~~~~~g~~P~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd 159 (519)
++++|+....++ ....+.++++|+.+.+=... +|.+. -++++.-.++ ++|+.++ +++..||
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~-----i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D 331 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVAR-----IPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYD 331 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEE-----EECTT-CCEEEEETTTTEEEEECS-------SCEEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEE-----EecCC-eeEEEECCCCCEEEEeCC-------CeEEEEE
Confidence 478998754221 11245799999999864322 23333 4555555443 6666542 6799999
Q ss_pred CCCC
Q 010034 160 TISL 163 (519)
Q Consensus 160 ~~t~ 163 (519)
+.+.
T Consensus 332 ~~t~ 335 (361)
T 2oiz_A 332 ISQP 335 (361)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 9887
No 305
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=20.84 E-value=8.1e+02 Score=26.38 Aligned_cols=207 Identities=12% Similarity=0.189 Sum_probs=98.4
Q ss_pred cEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEEeC---CeEEEEccccCCcCCCcEEEEECCCCeEEEEeeCCCC
Q 010034 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID---CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (519)
Q Consensus 47 ~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~---~~iyv~GG~~~~~~~~dv~~yd~~t~~W~~~~~~g~~ 123 (519)
-+++-+=.-.+|+.+..... +.....+..+++++.. +.+|+..|.........+++=+=.-.+|+++......
T Consensus 38 gv~rS~DgG~tW~~~~~~~~----~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~ 113 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIE----AQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPM 113 (789)
T ss_dssp CEEEEETTTTEEEESCTTCC----GGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCC
T ss_pred CEEEecCCCCCeeECccCCC----cccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCccc
Confidence 36777766778998742100 0000123345555542 4688876542211112333333345689998641111
Q ss_pred C---CCC-CccEEEEEC--CcEEEEEecCCCCcCCCcEEEEECCCCcEEEeccCCCCC---CcccCeeEEEe----CCEE
Q 010034 124 P---SPR-DFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVP---PPRCGHTATMV----EKRL 190 (519)
Q Consensus 124 P---~~r-~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~p---~~r~~~~~~~~----~~~l 190 (519)
+ ..| ..+.+++.. .+.+|+ |... ..+++=+=.-.+|+++. ..| ..-.+...+.+ .+.+
T Consensus 114 ~~~~~~~~~~~~iav~p~~~~~v~~-g~~~-----~gl~~S~DgG~TW~~~~---~~~~~~~~~~~~~~i~~~p~~~~~~ 184 (789)
T 1sqj_A 114 GANDMGRNNGERLAVNPFNSNEVWM-GTRT-----EGIWKSSDRAKTWTNVT---SIPDAFTNGIGYTSVIFDPERNGTI 184 (789)
T ss_dssp CTTSTTTTSCCCEEEETTEEEEEEE-ECSS-----SCEEEESSTTSSCEEET---TSCCCCSTTTCEEEEEECTTSTTCE
T ss_pred CccCCCccceeEEEEcCCCCCEEEE-Eecc-----CCEEEECCCCcccCCCc---cCccccCCCCCeEEEEECCCCCCEE
Confidence 1 122 223444432 235666 4321 23554333346899987 222 11123333333 2467
Q ss_pred EEEcccCCCCCcccccccccccccccCCCCceEEecCCCCCCCC----------------cceeEEEE--eCCEEEEEec
Q 010034 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSS----------------RCGHTITS--GGHYLLLFGG 252 (519)
Q Consensus 191 yv~GG~~~~~~~~~d~~~l~~v~~Yd~~t~~W~~i~~~g~~P~~----------------r~~~s~~~--~~~~iyv~GG 252 (519)
|+..... ..+++. .-.-.+|+.+. ..|.. ...|.+++ ..+.+|+..+
T Consensus 185 ~~~~~~~------~~v~~S------~DgG~TW~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~ 249 (789)
T 1sqj_A 185 YASATAP------QGMYVT------HDGGVSWEPVA---GQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYA 249 (789)
T ss_dssp EEEESST------TCEEEE------SSTTSSCEECT---TCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEE
T ss_pred EEEEcCC------CeEEEE------cCCCcCcccCC---CCcCccccccccccCcccccccccceeEEcCCCCeEEEEEe
Confidence 7754321 111221 22456899886 22321 11144443 2778888753
Q ss_pred cCCCCCcccccceeCcEEEEEcCCCeEEEcccC
Q 010034 253 HGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (519)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~t~~W~~v~~~ 285 (519)
..... .......+++.+-...+|+.+...
T Consensus 250 ~~~~p----~~g~~g~l~~S~DgG~tW~~~~~~ 278 (789)
T 1sqj_A 250 DYPGP----WGVTFGEVWRQNRTSGAWDDITPR 278 (789)
T ss_dssp SSCSS----SCCCCCCEEEEETTTCCEEECCCC
T ss_pred cCCCC----CCCCCceEEEEeCCCCceEECcCC
Confidence 21110 001235688888889999998763
No 306
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=20.83 E-value=91 Score=30.24 Aligned_cols=69 Identities=12% Similarity=0.124 Sum_probs=31.4
Q ss_pred eEEEEECCcEEEEEcCcCCCccCCcEEEEEcCCC--cEEeeeecCCCCCCCCCCCCcceeEEEEeCCeEEEEccccCCcC
Q 010034 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRR 100 (519)
Q Consensus 23 h~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~ 100 (519)
++..++.++.||+.+. + ..++++|..++ .|+.-. +. ...+.++.++.+|+.|+.+
T Consensus 2 ~ssP~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~~-----------~~s~p~~~~g~~~v~~s~d---- 58 (369)
T 2hz6_A 2 SSTVTLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--DP-----------VLQVPTHVEEPAFLPDPND---- 58 (369)
T ss_dssp ------CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--CC-----------SCCCC-----CCEEECTTT----
T ss_pred CCCCeeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--CC-----------ceecceEcCCCEEEEeCCC----
Confidence 3444555567777543 1 35899998876 476642 10 1112233456788876543
Q ss_pred CCcEEEEECCCC--eEE
Q 010034 101 LGDFWVLDTDIW--QWS 115 (519)
Q Consensus 101 ~~dv~~yd~~t~--~W~ 115 (519)
..++.+|..++ .|+
T Consensus 59 -g~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 59 -GSLYTLGSKNNEGLTK 74 (369)
T ss_dssp -CCEEEC-----CCSEE
T ss_pred -CEEEEEECCCCceeee
Confidence 34889998665 464
No 307
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=20.55 E-value=6.2e+02 Score=24.91 Aligned_cols=133 Identities=8% Similarity=-0.068 Sum_probs=67.1
Q ss_pred CcEEEEEcCcCCCccCCcEEEEEcCCCcEEeeeecCCCCCCCCCCCCcceeEEEE-eCCeEEEEccccCCcCCCcEEEEE
Q 010034 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLD 108 (519)
Q Consensus 30 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~dv~~yd 108 (519)
++.||+.-.. +.++++|+.++....+.. +..+- +.+++ -+++||+.--... .....+..++
T Consensus 152 ~g~Lyv~D~~------~~I~~id~~~g~v~~~~~----------~~~~P-~giavd~dG~lyVad~~~~-~~~~gv~~~~ 213 (433)
T 4hw6_A 152 YDDLYWVGQR------DAFRHVDFVNQYVDIKTT----------NIGQC-ADVNFTLNGDMVVVDDQSS-DTNTGIYLFT 213 (433)
T ss_dssp TCEEEEECBT------SCEEEEETTTTEEEEECC----------CCSCE-EEEEECTTCCEEEEECCSC-TTSEEEEEEC
T ss_pred CCEEEEEeCC------CCEEEEECCCCEEEEeec----------CCCCc-cEEEECCCCCEEEEcCCCC-cccceEEEEE
Confidence 3788886432 779999998888776631 12222 23333 3556888743211 1112355555
Q ss_pred CCCC-eE-EEEeeCCCCCCCCCccEEEEEC-CcEEEEEecCCCCcCCCcEEEEECCCCcE-EEeccCCCCCCcccCeeEE
Q 010034 109 TDIW-QW-SELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEW-MQLPVTGSVPPPRCGHTAT 184 (519)
Q Consensus 109 ~~t~-~W-~~~~~~g~~P~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W-~~l~~~~~~p~~r~~~~~~ 184 (519)
.... .+ ..++ .+ ..-..+++.. ++.||+.--. ...+++||+.+.+- ..+...+..+. ...++
T Consensus 214 ~~~~~~~~~~~~---~~---~~P~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~---~~~ia 279 (433)
T 4hw6_A 214 RASGFTERLSLC---NA---RGAKTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGS---NFHIV 279 (433)
T ss_dssp GGGTTCCEEEEE---EC---SSBCCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSS---CEEEE
T ss_pred CCCCeecccccc---cc---CCCCEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCC---cccEE
Confidence 4322 11 1222 11 1123344444 5688876422 24599999987765 33332222221 12344
Q ss_pred Ee--CCEEEEEc
Q 010034 185 MV--EKRLLIYG 194 (519)
Q Consensus 185 ~~--~~~lyv~G 194 (519)
+. ++.||+.-
T Consensus 280 ~dpdG~~LYvad 291 (433)
T 4hw6_A 280 WHPTGDWAYIIY 291 (433)
T ss_dssp ECTTSSEEEEEE
T ss_pred EeCCCCEEEEEe
Confidence 43 34688874
Done!