Query 010037
Match_columns 519
No_of_seqs 682 out of 3301
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 18:29:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 6.2E-34 2.1E-38 281.3 31.7 253 229-507 7-265 (304)
2 1vyh_C Platelet-activating fac 100.0 5.5E-34 1.9E-38 294.0 32.3 250 229-505 102-373 (410)
3 4gqb_B Methylosome protein 50; 100.0 5.6E-34 1.9E-38 287.1 30.6 248 234-504 81-334 (344)
4 3ow8_A WD repeat-containing pr 100.0 1.2E-33 4E-38 281.8 31.7 251 230-506 27-284 (321)
5 1got_B GT-beta; complex (GTP-b 100.0 2.8E-33 9.7E-38 281.1 34.0 249 228-505 48-305 (340)
6 1vyh_C Platelet-activating fac 100.0 9.5E-34 3.2E-38 292.2 27.3 242 231-500 146-410 (410)
7 2pbi_B Guanine nucleotide-bind 100.0 7.3E-33 2.5E-37 279.9 32.5 254 226-498 55-354 (354)
8 4g56_B MGC81050 protein; prote 100.0 4.7E-33 1.6E-37 281.7 29.0 205 280-501 135-343 (357)
9 3ow8_A WD repeat-containing pr 100.0 1.2E-32 4.2E-37 274.5 29.4 242 231-500 76-320 (321)
10 1got_B GT-beta; complex (GTP-b 100.0 2.1E-32 7E-37 274.8 29.8 240 234-498 96-340 (340)
11 4gqb_B Methylosome protein 50; 100.0 1.3E-32 4.6E-37 277.0 27.9 263 223-507 18-295 (344)
12 3frx_A Guanine nucleotide-bind 100.0 1.9E-32 6.6E-37 272.6 28.3 290 167-502 15-318 (319)
13 4aow_A Guanine nucleotide-bind 100.0 3.5E-32 1.2E-36 270.9 30.2 266 230-503 33-339 (340)
14 2pm7_B Protein transport prote 100.0 4.2E-32 1.4E-36 267.3 28.8 248 231-500 5-284 (297)
15 3frx_A Guanine nucleotide-bind 100.0 5.8E-32 2E-36 269.2 30.0 255 227-506 9-272 (319)
16 2xzm_R RACK1; ribosome, transl 100.0 4.3E-32 1.5E-36 272.7 29.0 269 227-502 13-341 (343)
17 3iz6_a 40S ribosomal protein R 100.0 8.6E-33 2.9E-37 282.0 23.3 280 180-503 78-377 (380)
18 4ery_A WD repeat-containing pr 100.0 7.7E-31 2.6E-35 259.3 30.2 250 229-506 17-273 (312)
19 1nr0_A Actin interacting prote 100.0 1.6E-30 5.5E-35 281.9 35.3 244 236-506 19-275 (611)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-31 1E-35 267.0 27.1 279 180-504 28-338 (345)
21 1nr0_A Actin interacting prote 100.0 4.7E-31 1.6E-35 286.1 30.4 249 231-506 55-360 (611)
22 3iz6_a 40S ribosomal protein R 100.0 1.9E-31 6.3E-36 272.1 24.7 250 229-505 60-333 (380)
23 3bg1_A Protein SEC13 homolog; 100.0 1.6E-31 5.5E-36 265.6 23.6 249 231-500 9-292 (316)
24 2hes_X YDR267CP; beta-propelle 100.0 4.9E-31 1.7E-35 263.7 26.5 248 234-501 57-328 (330)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.1E-31 2.4E-35 264.2 27.4 251 230-502 10-284 (345)
26 2hes_X YDR267CP; beta-propelle 100.0 1.7E-30 5.7E-35 259.8 28.1 250 229-503 8-282 (330)
27 2ynn_A Coatomer subunit beta'; 100.0 2.8E-30 9.5E-35 255.1 28.8 244 231-501 51-302 (304)
28 3zwl_B Eukaryotic translation 100.0 4.7E-30 1.6E-34 257.8 29.7 266 227-504 24-349 (369)
29 1erj_A Transcriptional repress 100.0 7E-30 2.4E-34 261.7 30.1 241 237-501 125-389 (393)
30 1gxr_A ESG1, transducin-like e 100.0 4E-29 1.4E-33 247.9 33.3 247 233-505 49-300 (337)
31 1erj_A Transcriptional repress 100.0 3E-29 1E-33 257.0 32.8 249 233-505 62-345 (393)
32 3jrp_A Fusion protein of prote 100.0 8.6E-30 2.9E-34 257.1 28.3 252 228-501 4-287 (379)
33 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-29 8E-34 249.7 29.1 257 231-505 7-341 (351)
34 3dm0_A Maltose-binding peripla 100.0 2.3E-29 7.7E-34 276.9 30.4 260 226-506 373-637 (694)
35 2ymu_A WD-40 repeat protein; u 100.0 1.9E-29 6.6E-34 270.3 28.9 236 231-498 340-577 (577)
36 4ery_A WD repeat-containing pr 100.0 6.6E-29 2.3E-33 245.4 29.1 242 232-500 62-311 (312)
37 4e54_B DNA damage-binding prot 100.0 4.3E-30 1.5E-34 266.7 21.5 246 231-504 115-433 (435)
38 2ymu_A WD-40 repeat protein; u 100.0 1.3E-28 4.5E-33 263.8 32.9 239 231-501 299-539 (577)
39 4gga_A P55CDC, cell division c 100.0 3.6E-28 1.2E-32 251.0 34.6 256 240-503 110-397 (420)
40 3dm0_A Maltose-binding peripla 100.0 5.1E-29 1.7E-33 274.1 29.5 274 180-500 395-692 (694)
41 4ggc_A P55CDC, cell division c 100.0 6.4E-28 2.2E-32 237.7 33.8 256 239-502 29-316 (318)
42 4h5i_A Guanine nucleotide-exch 100.0 8.5E-29 2.9E-33 251.2 28.1 213 283-516 132-358 (365)
43 1r5m_A SIR4-interacting protei 100.0 1.7E-28 5.9E-33 251.2 29.6 240 233-503 106-363 (425)
44 3odt_A Protein DOA1; ubiquitin 100.0 3.1E-28 1.1E-32 239.1 29.7 258 229-506 12-301 (313)
45 3gre_A Serine/threonine-protei 100.0 1.8E-29 6E-34 261.5 21.7 265 232-506 60-364 (437)
46 1k8k_C P40, ARP2/3 complex 41 100.0 3.5E-28 1.2E-32 245.1 30.6 245 234-501 7-274 (372)
47 1sq9_A Antiviral protein SKI8; 100.0 2.3E-28 8E-33 249.0 29.4 260 228-506 9-327 (397)
48 1sq9_A Antiviral protein SKI8; 100.0 1.2E-28 4.1E-33 251.2 26.9 249 231-503 58-397 (397)
49 3v7d_B Cell division control p 100.0 1.1E-27 3.9E-32 249.8 34.0 260 230-506 116-426 (464)
50 1gxr_A ESG1, transducin-like e 100.0 8.2E-28 2.8E-32 238.5 31.2 239 234-499 96-335 (337)
51 3dwl_C Actin-related protein 2 100.0 2.5E-29 8.4E-34 254.8 20.6 242 235-500 11-280 (377)
52 4a11_B DNA excision repair pro 100.0 6.6E-28 2.3E-32 245.7 30.5 257 231-506 39-370 (408)
53 4aez_A CDC20, WD repeat-contai 100.0 6.6E-28 2.3E-32 247.4 27.7 242 235-506 134-385 (401)
54 2pm9_A Protein WEB1, protein t 100.0 1.3E-27 4.3E-32 245.0 28.9 252 235-506 12-299 (416)
55 2pbi_B Guanine nucleotide-bind 100.0 3.1E-27 1E-31 238.6 31.0 213 277-505 57-275 (354)
56 3ei3_B DNA damage-binding prot 100.0 5.2E-28 1.8E-32 245.9 25.3 249 229-506 67-344 (383)
57 3dw8_B Serine/threonine-protei 100.0 3.7E-28 1.3E-32 251.6 24.5 267 235-507 28-379 (447)
58 2pm9_A Protein WEB1, protein t 100.0 2.7E-28 9.3E-33 249.9 22.7 249 234-504 66-340 (416)
59 3k26_A Polycomb protein EED; W 100.0 3.4E-28 1.1E-32 244.2 22.5 240 236-500 70-365 (366)
60 1k8k_C P40, ARP2/3 complex 41 100.0 5.2E-28 1.8E-32 243.8 23.7 250 231-503 48-363 (372)
61 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-27 6.4E-32 265.4 29.7 252 229-506 7-264 (814)
62 3i2n_A WD repeat-containing pr 100.0 2.9E-27 9.9E-32 236.7 28.1 253 232-503 15-293 (357)
63 3i2n_A WD repeat-containing pr 100.0 8.4E-28 2.9E-32 240.6 23.8 248 233-504 63-356 (357)
64 2xyi_A Probable histone-bindin 100.0 2.6E-27 9E-32 245.4 28.2 258 231-504 124-413 (430)
65 3jro_A Fusion protein of prote 100.0 5.9E-28 2E-32 268.0 24.9 252 230-503 4-287 (753)
66 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-28 7.2E-33 259.5 20.3 246 244-502 170-429 (524)
67 3vl1_A 26S proteasome regulato 100.0 3.7E-27 1.3E-31 242.2 28.9 238 237-503 58-324 (420)
68 1r5m_A SIR4-interacting protei 100.0 3.4E-27 1.2E-31 241.6 27.2 250 234-506 44-324 (425)
69 1pgu_A Actin interacting prote 100.0 1.6E-26 5.5E-31 248.9 33.8 249 234-506 17-288 (615)
70 4aez_A CDC20, WD repeat-contai 100.0 7.5E-27 2.6E-31 239.5 29.6 245 234-506 90-341 (401)
71 3sfz_A APAF-1, apoptotic pepti 100.0 4.7E-27 1.6E-31 274.5 31.5 245 231-501 611-913 (1249)
72 1yfq_A Cell cycle arrest prote 100.0 2.5E-27 8.5E-32 236.2 24.9 251 232-506 8-287 (342)
73 3vl1_A 26S proteasome regulato 100.0 3.9E-27 1.3E-31 242.0 26.7 233 240-501 102-365 (420)
74 3ei3_B DNA damage-binding prot 100.0 1.2E-27 4.1E-32 243.2 21.7 242 234-501 117-382 (383)
75 2aq5_A Coronin-1A; WD40 repeat 100.0 6.9E-27 2.4E-31 239.6 27.3 211 230-503 76-301 (402)
76 3k26_A Polycomb protein EED; W 100.0 3.5E-27 1.2E-31 236.8 20.8 248 233-504 16-321 (366)
77 2j04_B YDR362CP, TAU91; beta p 100.0 8.4E-27 2.9E-31 247.2 24.4 251 232-501 204-517 (524)
78 3dwl_C Actin-related protein 2 100.0 1.4E-27 4.7E-32 241.9 17.6 247 230-499 50-377 (377)
79 2oaj_A Protein SNI1; WD40 repe 100.0 4.7E-26 1.6E-30 256.9 31.9 117 386-504 486-667 (902)
80 3mmy_A MRNA export factor; mRN 99.9 1.5E-26 5.2E-31 232.0 24.4 260 230-499 34-344 (368)
81 4g56_B MGC81050 protein; prote 99.9 3.1E-26 1.1E-30 231.5 24.6 237 241-506 11-263 (357)
82 2xzm_R RACK1; ribosome, transl 99.9 1.4E-25 4.8E-30 225.1 29.1 204 277-501 14-244 (343)
83 2pm7_B Protein transport prote 99.9 8.6E-26 2.9E-30 222.1 26.1 208 279-502 4-239 (297)
84 3vu4_A KMHSV2; beta-propeller 99.9 9.5E-26 3.3E-30 227.7 27.0 259 231-501 15-336 (355)
85 3dw8_B Serine/threonine-protei 99.9 2.2E-26 7.5E-31 238.2 22.3 246 236-500 94-445 (447)
86 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.3E-25 7.9E-30 232.0 29.6 245 236-499 5-337 (450)
87 2oaj_A Protein SNI1; WD40 repe 99.9 5E-26 1.7E-30 256.8 24.9 204 230-506 12-247 (902)
88 1p22_A F-BOX/WD-repeat protein 99.9 3E-25 1E-29 230.1 28.6 227 242-503 138-367 (435)
89 2aq5_A Coronin-1A; WD40 repeat 99.9 1.6E-25 5.5E-30 229.4 25.9 205 240-503 39-256 (402)
90 4aow_A Guanine nucleotide-bind 99.9 6E-25 2E-29 218.5 28.6 224 278-506 32-291 (340)
91 4gq1_A NUP37; propeller, trans 99.9 3.8E-26 1.3E-30 234.0 18.4 242 240-499 94-387 (393)
92 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2E-24 6.8E-29 224.3 30.0 237 231-506 114-353 (445)
93 1pgu_A Actin interacting prote 99.9 1E-24 3.4E-29 234.8 28.2 250 232-505 60-332 (615)
94 3bg1_A Protein SEC13 homolog; 99.9 1.7E-25 5.8E-30 222.0 20.0 205 279-501 8-247 (316)
95 3gre_A Serine/threonine-protei 99.9 2.3E-25 8E-30 230.4 21.7 244 233-498 109-437 (437)
96 3lrv_A PRE-mRNA-splicing facto 99.9 3E-25 1E-29 222.6 21.5 201 236-502 77-293 (343)
97 4h5i_A Guanine nucleotide-exch 99.9 8.2E-25 2.8E-29 221.8 24.8 202 238-461 136-344 (365)
98 2w18_A PALB2, fancn, partner a 99.9 7.2E-25 2.5E-29 215.5 23.3 177 255-499 155-355 (356)
99 1yfq_A Cell cycle arrest prote 99.9 1.2E-24 4.1E-29 216.7 25.2 233 233-498 54-321 (342)
100 3mkq_A Coatomer beta'-subunit; 99.9 2.4E-24 8.1E-29 240.3 29.5 245 231-502 51-303 (814)
101 1p22_A F-BOX/WD-repeat protein 99.9 1.4E-24 5E-29 224.9 25.4 234 233-505 171-418 (435)
102 3sfz_A APAF-1, apoptotic pepti 99.9 2E-24 6.9E-29 252.2 29.3 264 231-506 653-1039(1249)
103 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.1E-23 3.6E-28 218.9 31.1 235 232-506 156-396 (445)
104 4e54_B DNA damage-binding prot 99.9 8E-25 2.7E-29 227.0 20.6 207 278-504 113-330 (435)
105 2j04_A TAU60, YPL007P, hypothe 99.9 2.7E-24 9.2E-29 224.4 24.0 238 236-500 16-296 (588)
106 3jrp_A Fusion protein of prote 99.9 6.5E-24 2.2E-28 213.9 25.5 209 278-502 5-241 (379)
107 3f3f_A Nucleoporin SEH1; struc 99.9 4.3E-24 1.5E-28 211.6 23.6 211 278-502 5-250 (351)
108 3lrv_A PRE-mRNA-splicing facto 99.9 1.6E-24 5.5E-29 217.3 19.2 197 241-504 42-247 (343)
109 3v7d_B Cell division control p 99.9 6.8E-23 2.3E-27 213.6 31.3 295 146-497 143-459 (464)
110 2xyi_A Probable histone-bindin 99.9 2E-23 7E-28 216.1 26.3 208 279-501 123-353 (430)
111 3odt_A Protein DOA1; ubiquitin 99.9 6.4E-23 2.2E-27 201.1 27.6 220 275-506 9-260 (313)
112 3zwl_B Eukaryotic translation 99.9 6.2E-23 2.1E-27 205.7 27.7 208 277-506 25-254 (369)
113 4a11_B DNA excision repair pro 99.9 2.2E-23 7.4E-28 212.2 24.4 222 255-504 21-279 (408)
114 2vdu_B TRNA (guanine-N(7)-)-me 99.9 8.4E-23 2.9E-27 212.7 28.4 245 232-504 99-396 (450)
115 1l0q_A Surface layer protein; 99.9 5.1E-22 1.7E-26 201.9 31.7 240 237-506 33-280 (391)
116 3bws_A Protein LP49; two-domai 99.9 1E-22 3.4E-27 210.1 26.8 246 238-506 125-395 (433)
117 3bws_A Protein LP49; two-domai 99.9 4.4E-22 1.5E-26 205.3 29.8 246 234-501 168-432 (433)
118 3vu4_A KMHSV2; beta-propeller 99.9 4.3E-22 1.5E-26 200.9 24.6 214 279-503 14-273 (355)
119 4ggc_A P55CDC, cell division c 99.9 8.6E-22 2.9E-26 193.7 25.9 208 235-461 67-316 (318)
120 1l0q_A Surface layer protein; 99.9 2.8E-21 9.4E-26 196.4 30.4 229 248-506 3-238 (391)
121 3mmy_A MRNA export factor; mRN 99.9 5.2E-22 1.8E-26 198.9 24.6 209 277-507 32-310 (368)
122 4gga_A P55CDC, cell division c 99.9 8.4E-22 2.9E-26 203.2 25.3 212 234-464 146-399 (420)
123 3jro_A Fusion protein of prote 99.9 1.9E-22 6.7E-27 223.7 22.0 209 278-502 3-239 (753)
124 2j04_A TAU60, YPL007P, hypothe 99.9 2.9E-22 1E-26 209.0 21.5 223 235-490 85-350 (588)
125 4gq1_A NUP37; propeller, trans 99.9 6.8E-22 2.3E-26 202.3 19.4 162 286-504 91-289 (393)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.8E-20 9.5E-25 191.8 27.2 207 230-509 173-395 (415)
127 2w18_A PALB2, fancn, partner a 99.9 4.6E-20 1.6E-24 181.4 24.6 178 285-507 112-320 (356)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-20 4.2E-25 195.6 21.1 211 237-502 38-279 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.8 2.6E-19 8.9E-24 184.5 25.6 190 247-508 143-351 (415)
130 1nir_A Nitrite reductase; hemo 99.8 9.3E-18 3.2E-22 178.8 26.1 259 238-510 181-523 (543)
131 2ojh_A Uncharacterized protein 99.8 3.8E-17 1.3E-21 157.7 25.5 226 252-505 17-262 (297)
132 1ri6_A Putative isomerase YBHE 99.8 6.6E-17 2.3E-21 160.2 26.6 248 236-506 38-315 (343)
133 3vgz_A Uncharacterized protein 99.8 1.6E-16 5.4E-21 158.4 29.2 242 237-506 42-308 (353)
134 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-17 4.5E-22 172.7 21.5 201 236-500 93-332 (434)
135 3u4y_A Uncharacterized protein 99.8 6E-17 2E-21 160.4 24.5 245 240-507 44-310 (331)
136 2ojh_A Uncharacterized protein 99.8 1.7E-17 5.7E-22 160.3 19.5 231 233-492 39-293 (297)
137 1nir_A Nitrite reductase; hemo 99.8 5.5E-17 1.9E-21 172.8 24.0 195 242-507 144-361 (543)
138 3hfq_A Uncharacterized protein 99.7 8.7E-16 3E-20 153.4 29.3 247 236-507 40-325 (347)
139 1jmx_B Amine dehydrogenase; ox 99.7 5.2E-16 1.8E-20 154.3 27.2 249 241-506 5-330 (349)
140 2ecf_A Dipeptidyl peptidase IV 99.7 3.4E-17 1.2E-21 180.8 20.1 200 237-507 38-327 (741)
141 1pby_B Quinohemoprotein amine 99.7 6.7E-16 2.3E-20 152.5 26.9 235 248-506 2-315 (337)
142 3o4h_A Acylamino-acid-releasin 99.7 4.1E-17 1.4E-21 175.2 19.0 235 237-506 23-279 (582)
143 3u4y_A Uncharacterized protein 99.7 1.4E-15 4.7E-20 150.6 28.1 236 242-504 4-255 (331)
144 1xfd_A DIP, dipeptidyl aminope 99.7 4E-17 1.4E-21 179.6 17.5 200 238-507 19-295 (723)
145 1ri6_A Putative isomerase YBHE 99.7 1.3E-15 4.3E-20 150.9 25.4 228 249-500 7-261 (343)
146 3vgz_A Uncharacterized protein 99.7 3.1E-15 1.1E-19 149.0 28.2 226 238-492 91-335 (353)
147 2ecf_A Dipeptidyl peptidase IV 99.7 1.5E-15 5E-20 167.7 24.8 250 237-500 110-412 (741)
148 3scy_A Hypothetical bacterial 99.7 1.9E-14 6.4E-19 144.6 29.8 252 236-508 50-346 (361)
149 1k32_A Tricorn protease; prote 99.7 1.7E-15 5.8E-20 173.9 23.0 242 232-507 200-467 (1045)
150 2z3z_A Dipeptidyl aminopeptida 99.7 1E-14 3.5E-19 160.0 27.9 250 236-503 121-437 (706)
151 1k32_A Tricorn protease; prote 99.7 1.4E-15 4.9E-20 174.5 21.1 195 236-504 296-505 (1045)
152 1xfd_A DIP, dipeptidyl aminope 99.7 6.4E-15 2.2E-19 162.0 25.1 251 238-500 63-392 (723)
153 2z3z_A Dipeptidyl aminopeptida 99.7 8.5E-15 2.9E-19 160.7 25.0 258 237-508 83-398 (706)
154 1z68_A Fibroblast activation p 99.6 1.2E-15 4.2E-20 167.8 14.1 195 240-507 20-297 (719)
155 3pe7_A Oligogalacturonate lyas 99.6 1.1E-14 3.6E-19 147.5 18.9 255 241-508 41-336 (388)
156 1jof_A Carboxy-CIS,CIS-muconat 99.6 2E-14 6.9E-19 145.0 20.6 242 238-504 42-344 (365)
157 3o4h_A Acylamino-acid-releasin 99.6 1.7E-14 5.9E-19 154.8 20.4 203 283-505 20-231 (582)
158 4a5s_A Dipeptidyl peptidase 4 99.6 1.7E-14 5.9E-19 159.4 19.4 244 239-510 20-362 (740)
159 3scy_A Hypothetical bacterial 99.6 2.7E-13 9.3E-18 136.0 25.0 237 244-503 10-295 (361)
160 1q7f_A NHL, brain tumor CG1071 99.6 1.3E-12 4.3E-17 126.7 27.3 240 235-501 29-280 (286)
161 1pby_B Quinohemoprotein amine 99.6 4.5E-13 1.5E-17 132.0 23.8 211 237-465 83-315 (337)
162 3hfq_A Uncharacterized protein 99.5 4.9E-13 1.7E-17 133.3 21.1 181 255-501 14-218 (347)
163 1z68_A Fibroblast activation p 99.5 2.6E-13 9E-18 149.2 19.3 251 238-500 62-390 (719)
164 3c5m_A Oligogalacturonate lyas 99.5 1.3E-12 4.6E-17 132.0 22.8 252 238-507 38-335 (396)
165 3fvz_A Peptidyl-glycine alpha- 99.5 7.4E-12 2.5E-16 124.3 27.5 238 236-501 24-322 (329)
166 1jmx_B Amine dehydrogenase; ox 99.5 1.2E-12 4.1E-17 129.8 19.0 193 289-506 4-289 (349)
167 3azo_A Aminopeptidase; POP fam 99.5 1.2E-12 4.3E-17 142.3 20.4 191 244-507 87-331 (662)
168 3e5z_A Putative gluconolactona 99.5 1.8E-11 6.3E-16 119.2 25.8 244 240-506 32-291 (296)
169 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.6E-11 5.4E-16 123.6 25.9 246 249-505 4-296 (365)
170 2gop_A Trilobed protease; beta 99.4 3.1E-11 1.1E-15 119.9 25.4 233 237-507 60-336 (347)
171 3azo_A Aminopeptidase; POP fam 99.4 1.3E-12 4.4E-17 142.2 16.3 207 235-507 23-280 (662)
172 2oiz_A Aromatic amine dehydrog 99.4 1.9E-11 6.6E-16 123.1 23.7 232 240-483 54-360 (361)
173 2dg1_A DRP35, lactonase; beta 99.4 6E-10 2.1E-14 110.0 31.8 231 238-492 47-301 (333)
174 1xip_A Nucleoporin NUP159; bet 99.4 1.7E-11 5.7E-16 123.7 19.4 178 237-489 39-232 (388)
175 2dg1_A DRP35, lactonase; beta 99.4 4.1E-11 1.4E-15 118.5 21.1 193 236-501 6-213 (333)
176 3pe7_A Oligogalacturonate lyas 99.4 4E-11 1.4E-15 121.0 21.3 236 240-499 85-380 (388)
177 1rwi_B Serine/threonine-protei 99.4 1E-10 3.5E-15 111.7 22.6 236 238-503 26-266 (270)
178 4a5s_A Dipeptidyl peptidase 4 99.4 1.1E-11 3.6E-16 137.1 17.8 202 286-503 18-296 (740)
179 2xdw_A Prolyl endopeptidase; a 99.3 2.1E-10 7E-15 126.1 26.0 245 238-503 127-416 (710)
180 2oiz_A Aromatic amine dehydrog 99.3 2.8E-10 9.5E-15 114.6 24.7 237 255-507 29-342 (361)
181 3no2_A Uncharacterized protein 99.3 3.9E-10 1.3E-14 109.0 24.6 212 246-489 4-231 (276)
182 3c5m_A Oligogalacturonate lyas 99.3 3.7E-11 1.3E-15 121.3 16.8 239 241-503 86-386 (396)
183 2bkl_A Prolyl endopeptidase; m 99.3 2E-10 6.8E-15 125.9 21.8 196 237-500 122-348 (695)
184 3dsm_A Uncharacterized protein 99.3 1.9E-09 6.6E-14 106.8 26.5 234 241-507 49-308 (328)
185 2gop_A Trilobed protease; beta 99.3 2.8E-10 9.6E-15 113.0 20.2 181 241-507 20-257 (347)
186 1q7f_A NHL, brain tumor CG1071 99.3 1.4E-09 4.9E-14 104.9 24.6 204 282-507 27-244 (286)
187 3fvz_A Peptidyl-glycine alpha- 99.2 7E-10 2.4E-14 109.9 22.1 203 284-507 23-283 (329)
188 2mad_H Methylamine dehydrogena 99.2 8.2E-09 2.8E-13 104.2 29.6 243 240-507 70-356 (373)
189 2xdw_A Prolyl endopeptidase; a 99.2 1.7E-09 5.7E-14 118.9 25.5 219 282-503 122-370 (710)
190 2bkl_A Prolyl endopeptidase; m 99.2 2E-10 6.9E-15 125.9 17.1 194 243-503 75-306 (695)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.1E-08 3.8E-13 99.7 27.9 251 238-502 20-300 (314)
192 2z2n_A Virginiamycin B lyase; 99.2 2.9E-08 1E-12 95.6 30.6 237 237-506 16-259 (299)
193 1qks_A Cytochrome CD1 nitrite 99.2 5.6E-09 1.9E-13 111.1 26.0 193 243-506 163-378 (567)
194 3e5z_A Putative gluconolactona 99.2 3.9E-09 1.3E-13 102.5 22.9 204 278-504 21-249 (296)
195 1xip_A Nucleoporin NUP159; bet 99.1 4.3E-10 1.5E-14 113.4 14.1 154 286-504 39-194 (388)
196 1qks_A Cytochrome CD1 nitrite 99.1 1.5E-08 5.1E-13 107.8 25.8 256 240-509 201-546 (567)
197 2z2n_A Virginiamycin B lyase; 99.1 1.4E-07 4.7E-12 90.9 30.2 233 238-504 59-298 (299)
198 3sjl_D Methylamine dehydrogena 99.1 1.8E-08 6E-13 101.3 22.7 256 241-506 38-368 (386)
199 3hrp_A Uncharacterized protein 99.1 4.1E-08 1.4E-12 100.4 26.0 231 237-499 132-408 (409)
200 2qc5_A Streptogramin B lactona 99.1 3.3E-07 1.1E-11 88.2 30.8 235 238-505 22-263 (300)
201 3g4e_A Regucalcin; six bladed 99.0 2.7E-07 9.1E-12 89.8 29.8 227 241-490 18-261 (297)
202 1yr2_A Prolyl oligopeptidase; 99.0 2.4E-08 8.2E-13 110.2 24.5 245 238-507 165-447 (741)
203 3dsm_A Uncharacterized protein 99.0 2.8E-08 9.5E-13 98.4 22.2 226 253-505 13-257 (328)
204 1yr2_A Prolyl oligopeptidase; 99.0 2.7E-08 9.4E-13 109.7 24.4 258 243-507 114-401 (741)
205 3no2_A Uncharacterized protein 99.0 1.4E-08 4.9E-13 98.0 19.5 187 295-507 4-202 (276)
206 3c75_H MADH, methylamine dehyd 99.0 2.4E-08 8.2E-13 102.0 20.3 246 240-507 122-408 (426)
207 3iuj_A Prolyl endopeptidase; h 99.0 3.2E-08 1.1E-12 108.4 21.6 200 238-507 131-365 (693)
208 2ghs_A AGR_C_1268P; regucalcin 98.9 1.5E-06 5E-11 85.8 30.7 221 241-491 54-292 (326)
209 1rwi_B Serine/threonine-protei 98.9 1E-07 3.6E-12 90.6 20.2 197 286-505 25-226 (270)
210 2qc5_A Streptogramin B lactona 98.9 1.4E-06 4.7E-11 83.8 28.0 228 239-500 65-299 (300)
211 3dr2_A Exported gluconolactona 98.9 2E-07 6.9E-12 91.0 21.9 234 240-495 49-301 (305)
212 2qe8_A Uncharacterized protein 98.9 7.1E-08 2.4E-12 96.0 18.4 210 237-505 18-282 (343)
213 3sjl_D Methylamine dehydrogena 98.8 1.9E-07 6.5E-12 93.7 20.4 231 241-481 83-384 (386)
214 3hrp_A Uncharacterized protein 98.8 9.8E-07 3.3E-11 90.1 25.0 205 285-507 131-360 (409)
215 2hz6_A Endoplasmic reticulum t 98.8 7.5E-10 2.6E-14 111.8 1.0 185 246-504 8-195 (369)
216 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 3.7E-07 1.3E-11 88.7 19.5 203 282-504 15-259 (314)
217 3iuj_A Prolyl endopeptidase; h 98.7 7.3E-07 2.5E-11 97.5 22.2 200 239-507 178-411 (693)
218 1mda_H Methylamine dehydrogena 98.7 1.4E-06 4.6E-11 87.4 20.9 233 258-506 47-351 (368)
219 3dr2_A Exported gluconolactona 98.6 1.3E-06 4.4E-11 85.2 18.3 157 280-503 40-226 (305)
220 1mda_H Methylamine dehydrogena 98.6 6.1E-07 2.1E-11 89.9 15.1 228 240-480 69-366 (368)
221 2mad_H Methylamine dehydrogena 98.6 1.7E-05 5.8E-10 79.8 25.0 191 243-502 28-244 (373)
222 2ghs_A AGR_C_1268P; regucalcin 98.5 7.6E-06 2.6E-10 80.6 21.3 110 389-502 90-213 (326)
223 2ece_A 462AA long hypothetical 98.5 6.7E-06 2.3E-10 83.4 20.5 195 242-500 88-351 (462)
224 2qe8_A Uncharacterized protein 98.5 1.2E-06 4.1E-11 87.0 14.1 225 236-497 67-317 (343)
225 3g4e_A Regucalcin; six bladed 98.5 8.3E-06 2.8E-10 79.1 19.7 199 285-506 13-234 (297)
226 3c75_H MADH, methylamine dehyd 98.4 2.6E-05 8.8E-10 79.5 20.7 192 245-503 82-297 (426)
227 1npe_A Nidogen, entactin; glyc 98.4 0.0004 1.4E-08 65.8 27.8 233 248-506 2-243 (267)
228 1kb0_A Quinohemoprotein alcoho 98.3 3.9E-05 1.3E-09 83.4 21.7 91 409-500 457-566 (677)
229 1fwx_A Nitrous oxide reductase 98.3 5.6E-05 1.9E-09 79.3 20.7 249 245-506 99-436 (595)
230 2iwa_A Glutamine cyclotransfer 98.3 0.0002 7E-09 67.9 22.9 189 240-502 25-238 (266)
231 1kb0_A Quinohemoprotein alcoho 98.3 5.1E-05 1.7E-09 82.5 21.3 104 401-505 329-511 (677)
232 2hz6_A Endoplasmic reticulum t 98.3 9.2E-08 3.2E-12 96.3 -0.4 141 295-504 8-152 (369)
233 1yiq_A Quinohemoprotein alcoho 98.2 5.8E-05 2E-09 82.2 21.0 104 401-505 321-509 (689)
234 2fp8_A Strictosidine synthase; 98.2 0.00012 4.1E-09 71.6 21.3 202 239-502 22-270 (322)
235 2iwa_A Glutamine cyclotransfer 98.2 7.4E-05 2.5E-09 70.9 18.9 155 287-506 23-186 (266)
236 2ece_A 462AA long hypothetical 98.2 6.9E-05 2.4E-09 76.0 19.6 182 241-489 143-399 (462)
237 3hxj_A Pyrrolo-quinoline quino 98.2 0.00013 4.3E-09 71.1 20.4 216 247-501 107-324 (330)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.0027 9.2E-08 63.1 30.4 248 246-505 52-341 (376)
239 1yiq_A Quinohemoprotein alcoho 98.2 9E-05 3.1E-09 80.7 20.1 79 408-487 454-534 (689)
240 3nol_A Glutamine cyclotransfer 98.1 0.00018 6.1E-09 67.7 18.3 154 287-506 45-206 (262)
241 3nol_A Glutamine cyclotransfer 98.1 0.00041 1.4E-08 65.2 19.7 174 241-490 48-244 (262)
242 3nok_A Glutaminyl cyclase; bet 98.0 0.00036 1.2E-08 65.7 19.0 153 287-506 57-215 (268)
243 1npe_A Nidogen, entactin; glyc 98.0 0.0041 1.4E-07 58.6 26.8 220 237-483 37-263 (267)
244 3nok_A Glutaminyl cyclase; bet 98.0 0.00037 1.3E-08 65.6 18.6 173 241-489 60-253 (268)
245 3hxj_A Pyrrolo-quinoline quino 98.0 0.00049 1.7E-08 66.8 20.4 182 296-506 107-289 (330)
246 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.00081 2.8E-08 67.0 22.4 226 247-498 143-375 (376)
247 4a2l_A BT_4663, two-component 97.9 0.014 4.8E-07 64.4 33.1 245 238-508 217-487 (795)
248 3mbr_X Glutamine cyclotransfer 97.9 0.0015 5.1E-08 60.8 20.5 156 285-506 21-184 (243)
249 3qqz_A Putative uncharacterize 97.8 0.0034 1.2E-07 59.0 22.0 202 236-499 27-251 (255)
250 2p4o_A Hypothetical protein; p 97.8 0.0091 3.1E-07 57.6 25.7 224 240-492 36-279 (306)
251 2fp8_A Strictosidine synthase; 97.8 0.0033 1.1E-07 61.2 21.6 108 390-501 186-313 (322)
252 1fwx_A Nitrous oxide reductase 97.7 0.00069 2.4E-08 71.0 16.8 199 295-501 100-361 (595)
253 2ad6_A Methanol dehydrogenase 97.7 0.0034 1.2E-07 66.6 22.4 104 401-505 318-498 (571)
254 4a2l_A BT_4663, two-component 97.7 0.018 6E-07 63.6 28.4 239 237-504 264-529 (795)
255 2xe4_A Oligopeptidase B; hydro 97.7 0.0042 1.4E-07 68.2 22.8 243 239-505 177-462 (751)
256 1k3i_A Galactose oxidase precu 97.6 0.006 2E-07 65.9 22.5 248 240-507 190-503 (656)
257 1w6s_A Methanol dehydrogenase 97.6 0.0066 2.2E-07 64.6 22.1 57 449-505 451-507 (599)
258 1kv9_A Type II quinohemoprotei 97.6 0.0028 9.6E-08 68.6 19.1 56 450-505 437-492 (668)
259 1flg_A Protein (quinoprotein e 97.5 0.0051 1.8E-07 65.4 20.6 80 407-487 464-545 (582)
260 3v9f_A Two-component system se 97.5 0.043 1.5E-06 60.4 28.3 247 238-507 260-530 (781)
261 1kv9_A Type II quinohemoprotei 97.5 0.006 2E-07 66.0 20.6 82 407-489 436-520 (668)
262 3mbr_X Glutamine cyclotransfer 97.5 0.0025 8.6E-08 59.3 15.0 116 389-506 21-138 (243)
263 1flg_A Protein (quinoprotein e 97.4 0.01 3.5E-07 63.0 21.0 56 450-505 465-520 (582)
264 3v65_B Low-density lipoprotein 97.4 0.13 4.5E-06 51.3 29.2 233 240-503 81-320 (386)
265 3v9f_A Two-component system se 97.4 0.069 2.4E-06 58.7 27.7 244 238-507 315-574 (781)
266 3amr_A 3-phytase; beta-propell 97.4 0.08 2.7E-06 51.8 24.7 111 389-500 128-262 (355)
267 2p9w_A MAL S 1 allergenic prot 97.4 0.011 3.7E-07 57.4 18.4 110 391-501 65-215 (334)
268 2xe4_A Oligopeptidase B; hydro 97.3 0.0036 1.2E-07 68.7 16.5 108 392-501 224-354 (751)
269 3tc9_A Hypothetical hydrolase; 97.3 0.0069 2.4E-07 61.8 16.7 112 389-500 179-300 (430)
270 2ad6_A Methanol dehydrogenase 97.2 0.019 6.5E-07 60.8 19.5 80 407-487 442-523 (571)
271 3tc9_A Hypothetical hydrolase; 97.2 0.061 2.1E-06 54.7 22.7 70 390-460 227-301 (430)
272 3v64_C Agrin; beta propeller, 97.2 0.22 7.5E-06 48.9 28.5 235 238-503 36-277 (349)
273 4hw6_A Hypothetical protein, I 97.0 0.062 2.1E-06 54.7 20.7 116 389-506 228-378 (433)
274 2p4o_A Hypothetical protein; p 97.0 0.12 4.2E-06 49.5 21.8 109 390-501 73-198 (306)
275 1w6s_A Methanol dehydrogenase 97.0 0.065 2.2E-06 56.9 21.3 78 407-485 451-530 (599)
276 2xbg_A YCF48-like protein; pho 97.0 0.093 3.2E-06 51.1 20.9 108 388-499 204-320 (327)
277 3sov_A LRP-6, low-density lipo 96.9 0.33 1.1E-05 46.9 25.2 197 239-504 38-241 (318)
278 2p9w_A MAL S 1 allergenic prot 96.9 0.13 4.4E-06 49.9 20.6 210 240-501 17-265 (334)
279 2ism_A Putative oxidoreductase 96.9 0.35 1.2E-05 47.5 24.5 240 239-489 34-333 (352)
280 1k3i_A Galactose oxidase precu 96.9 0.047 1.6E-06 58.7 19.4 234 241-490 248-530 (656)
281 3m0c_C LDL receptor, low-densi 96.7 0.44 1.5E-05 52.3 25.3 117 389-505 471-593 (791)
282 1ijq_A LDL receptor, low-densi 96.6 0.58 2E-05 45.1 29.8 218 257-503 10-240 (316)
283 3p5b_L Low density lipoprotein 96.5 0.78 2.7E-05 45.9 29.9 220 255-503 90-322 (400)
284 4hw6_A Hypothetical protein, I 96.5 0.055 1.9E-06 55.1 15.8 112 389-500 182-303 (433)
285 3sov_A LRP-6, low-density lipo 96.5 0.59 2E-05 45.2 22.4 112 390-502 80-198 (318)
286 3m0c_C LDL receptor, low-densi 96.4 0.72 2.5E-05 50.5 25.2 113 390-503 515-634 (791)
287 3sre_A PON1, serum paraoxonase 96.4 0.45 1.5E-05 46.8 21.1 111 389-500 165-297 (355)
288 1n7d_A LDL receptor, low-densi 96.3 0.02 6.7E-07 62.3 11.8 115 391-506 498-619 (699)
289 3kya_A Putative phosphatase; s 96.3 0.11 3.6E-06 53.7 16.5 107 390-499 187-339 (496)
290 3qqz_A Putative uncharacterize 96.3 0.13 4.4E-06 48.2 15.6 115 384-500 22-150 (255)
291 3kya_A Putative phosphatase; s 96.0 0.55 1.9E-05 48.3 20.3 114 391-506 249-414 (496)
292 2xbg_A YCF48-like protein; pho 95.8 1.5 5.1E-05 42.3 23.1 113 389-506 163-283 (327)
293 4a0p_A LRP6, LRP-6, low-densit 95.8 2.6 8.8E-05 44.9 28.3 227 249-503 8-239 (628)
294 3v64_C Agrin; beta propeller, 95.6 1.9 6.4E-05 42.1 23.4 114 389-502 116-235 (349)
295 3pbp_A Nucleoporin NUP82; beta 95.6 0.48 1.6E-05 47.4 16.9 68 387-456 123-208 (452)
296 3pbp_A Nucleoporin NUP82; beta 95.5 0.21 7.1E-06 50.1 14.1 77 238-315 68-158 (452)
297 3v65_B Low-density lipoprotein 95.4 0.91 3.1E-05 45.1 19.0 114 389-502 116-235 (386)
298 3sre_A PON1, serum paraoxonase 95.4 0.78 2.7E-05 45.1 17.7 90 408-500 138-251 (355)
299 2vpj_A Kelch-like protein 12; 95.1 1.5 5.2E-05 41.3 18.6 95 409-508 175-285 (301)
300 1ijq_A LDL receptor, low-densi 95.0 2.5 8.7E-05 40.4 24.5 114 389-502 77-196 (316)
301 1tl2_A L10, protein (tachylect 95.0 0.28 9.6E-06 44.6 11.9 97 391-493 90-202 (236)
302 3s94_A LRP-6, low-density lipo 94.9 2.3 7.7E-05 45.2 21.0 196 240-504 44-246 (619)
303 3ii7_A Kelch-like protein 7; p 94.7 1.9 6.5E-05 40.8 18.4 96 408-507 168-278 (306)
304 1n7d_A LDL receptor, low-densi 94.7 0.12 4.2E-06 56.0 10.6 113 391-503 455-573 (699)
305 2xzh_A Clathrin heavy chain 1; 94.4 3.8 0.00013 39.5 25.4 218 257-507 49-296 (365)
306 3ei3_A DNA damage-binding prot 94.3 9.7 0.00033 43.6 29.5 114 390-505 515-642 (1158)
307 1bpo_A Protein (clathrin); cla 94.2 5.1 0.00017 40.3 24.8 219 256-507 47-295 (494)
308 2xzh_A Clathrin heavy chain 1; 94.2 4.2 0.00014 39.2 27.0 241 241-506 72-337 (365)
309 3a9g_A Putative uncharacterize 94.2 4.5 0.00015 39.5 25.3 242 239-489 32-330 (354)
310 1tl2_A L10, protein (tachylect 94.2 0.045 1.5E-06 49.8 4.7 102 389-496 41-158 (236)
311 1cru_A Protein (soluble quinop 94.1 4.6 0.00016 41.0 20.5 33 284-316 26-58 (454)
312 1bpo_A Protein (clathrin); cla 93.8 6.3 0.00021 39.6 27.3 241 241-506 71-336 (494)
313 3das_A Putative oxidoreductase 93.5 2.8 9.6E-05 40.9 16.7 34 283-316 30-63 (347)
314 3p5b_L Low density lipoprotein 93.5 6.6 0.00023 39.0 26.3 203 238-464 114-324 (400)
315 1zgk_A Kelch-like ECH-associat 93.4 2.3 7.8E-05 40.4 15.9 95 409-508 184-294 (308)
316 3ott_A Two-component system se 92.6 8.2 0.00028 41.8 20.7 114 388-506 145-265 (758)
317 2ism_A Putative oxidoreductase 92.5 2.7 9.3E-05 41.0 15.2 98 388-488 30-152 (352)
318 3a9g_A Putative uncharacterize 91.9 2.6 8.7E-05 41.3 14.2 99 388-488 28-152 (354)
319 2g8s_A Glucose/sorbosone dehyd 91.6 2.9 9.8E-05 40.8 14.2 28 285-313 18-46 (353)
320 2vpj_A Kelch-like protein 12; 91.2 7.7 0.00026 36.3 16.5 96 409-508 128-238 (301)
321 2xn4_A Kelch-like protein 2; s 91.1 9.9 0.00034 35.5 21.8 98 409-508 173-283 (302)
322 2g8s_A Glucose/sorbosone dehyd 91.0 12 0.00041 36.3 26.6 64 425-488 267-340 (353)
323 4a0p_A LRP6, LRP-6, low-densit 91.0 18 0.00061 38.3 24.1 115 389-503 80-199 (628)
324 1zgk_A Kelch-like ECH-associat 91.0 9.8 0.00034 35.8 17.1 95 409-508 137-247 (308)
325 2uvk_A YJHT; unknown function, 90.8 7.9 0.00027 37.3 16.5 57 452-510 286-351 (357)
326 1xi4_A Clathrin heavy chain; a 90.5 9.2 0.00031 44.3 18.1 219 256-507 47-295 (1630)
327 2zwa_A Leucine carboxyl methyl 89.7 12 0.0004 40.2 18.0 107 399-505 500-639 (695)
328 3ei3_A DNA damage-binding prot 89.6 33 0.0011 39.2 28.2 218 248-490 524-756 (1158)
329 2be1_A Serine/threonine-protei 89.1 5.2 0.00018 38.8 13.2 98 406-505 64-187 (339)
330 3ott_A Two-component system se 89.0 28 0.00094 37.5 24.2 115 389-506 419-550 (758)
331 2xn4_A Kelch-like protein 2; s 88.6 15 0.00052 34.2 16.2 106 399-508 108-236 (302)
332 3amr_A 3-phytase; beta-propell 88.4 19 0.00066 34.9 24.5 85 379-464 171-268 (355)
333 1xi4_A Clathrin heavy chain; a 88.4 16 0.00053 42.5 17.9 240 242-506 72-336 (1630)
334 2be1_A Serine/threonine-protei 87.9 0.49 1.7E-05 46.1 5.0 107 399-505 10-134 (339)
335 3s94_A LRP-6, low-density lipo 87.7 30 0.001 36.4 26.2 114 390-503 393-512 (619)
336 3s25_A Hypothetical 7-bladed b 86.8 21 0.00073 33.7 19.8 99 396-502 152-256 (302)
337 1cru_A Protein (soluble quinop 86.8 7.6 0.00026 39.3 13.4 102 388-490 26-163 (454)
338 3ii7_A Kelch-like protein 7; p 86.7 20 0.00069 33.4 17.6 104 401-508 104-232 (306)
339 2woz_A Kelch repeat and BTB do 85.5 24 0.00082 33.1 17.8 95 409-507 175-293 (318)
340 4gq2_M Nucleoporin NUP120; bet 84.3 57 0.0019 36.3 23.6 38 389-426 236-274 (950)
341 2woz_A Kelch repeat and BTB do 81.1 36 0.0012 31.8 19.3 95 410-508 128-238 (318)
342 2rr3_B OSBP, oxysterol-binding 80.1 0.91 3.1E-05 28.8 1.9 21 3-23 11-31 (47)
343 4asc_A Kelch repeat and BTB do 80.0 39 0.0013 31.5 21.9 103 401-507 151-283 (315)
344 3sbq_A Nitrous-oxide reductase 79.4 6.3 0.00021 40.9 8.9 114 389-503 323-480 (638)
345 4gq2_M Nucleoporin NUP120; bet 77.7 29 0.00099 38.7 14.6 35 430-465 237-271 (950)
346 4asc_A Kelch repeat and BTB do 75.4 53 0.0018 30.6 17.6 96 409-508 117-228 (315)
347 3s25_A Hypothetical 7-bladed b 73.1 62 0.0021 30.4 19.5 105 395-507 110-222 (302)
348 3das_A Putative oxidoreductase 70.8 78 0.0027 30.5 25.3 244 238-489 34-326 (347)
349 2wg3_C Hedgehog-interacting pr 66.0 79 0.0027 31.8 13.6 103 389-491 14-159 (463)
350 3no0_A DNA gyrase subunit A; D 65.7 85 0.0029 29.1 20.4 99 401-501 129-246 (276)
351 2uvk_A YJHT; unknown function, 62.3 70 0.0024 30.3 12.1 94 409-506 86-233 (357)
352 4fhn_B Nucleoporin NUP120; pro 60.1 96 0.0033 35.3 14.3 38 389-426 238-276 (1139)
353 3uc1_A DNA gyrase subunit A; D 58.9 1.3E+02 0.0043 28.7 19.0 100 401-501 159-279 (327)
354 2zwa_A Leucine carboxyl methyl 56.7 52 0.0018 35.1 10.8 104 399-503 451-579 (695)
355 3sbq_A Nitrous-oxide reductase 54.2 23 0.00077 36.8 6.8 91 410-501 299-408 (638)
356 3b7f_A Glycosyl hydrolase, BNR 48.7 1.2E+02 0.0041 29.2 11.3 108 389-497 55-204 (394)
357 3f7f_A Nucleoporin NUP120; nuc 48.7 2.3E+02 0.0078 30.3 13.7 36 390-426 223-258 (729)
358 4fhn_B Nucleoporin NUP120; pro 44.4 16 0.00055 41.7 4.4 41 286-326 239-279 (1139)
359 3uc1_A DNA gyrase subunit A; D 39.3 2.5E+02 0.0087 26.5 14.8 100 401-501 111-228 (327)
360 3f7f_A Nucleoporin NUP120; nuc 39.1 39 0.0013 36.1 6.0 37 286-324 223-259 (729)
361 2wg3_C Hedgehog-interacting pr 38.2 3.2E+02 0.011 27.3 26.8 59 236-295 14-79 (463)
362 4a9v_A PHOX; hydrolase, beta-p 36.4 1.1E+02 0.0038 31.7 8.7 60 429-489 476-549 (592)
363 3no0_A DNA gyrase subunit A; D 34.6 2.7E+02 0.0093 25.5 14.5 100 400-501 81-196 (276)
364 3zwu_A Alkaline phosphatase PH 33.4 97 0.0033 32.3 7.9 59 430-489 477-549 (592)
365 4a9v_A PHOX; hydrolase, beta-p 30.6 1.7E+02 0.0058 30.3 9.0 59 389-448 476-549 (592)
366 1suu_A DNA gyrase subunit A; t 28.0 3.7E+02 0.013 25.0 22.9 101 400-502 115-232 (312)
367 4hvt_A Ritya.17583.B, post-pro 27.4 5.8E+02 0.02 27.0 19.5 54 449-503 318-383 (711)
368 3zwu_A Alkaline phosphatase PH 26.1 1.7E+02 0.0057 30.5 8.1 57 390-447 477-548 (592)
369 1q47_A Semaphorin 3A; beta pro 23.9 3E+02 0.01 27.8 9.5 65 390-455 405-487 (495)
370 1q47_A Semaphorin 3A; beta pro 23.8 1.3E+02 0.0043 30.7 6.6 62 249-310 423-487 (495)
371 1zi0_A DNA gyrase subunit A; b 23.8 4.4E+02 0.015 24.4 18.8 194 294-500 1-225 (307)
372 3b7f_A Glycosyl hydrolase, BNR 23.7 4.7E+02 0.016 24.8 20.4 108 390-498 116-259 (394)
373 1zvt_A Topoisomerase IV subuni 22.4 3.7E+02 0.013 24.3 9.0 99 401-501 46-163 (256)
374 4gz8_A Semaphorin-3A; multi-do 20.3 6.2E+02 0.021 26.6 11.2 54 401-455 431-495 (667)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.2e-34 Score=281.33 Aligned_cols=253 Identities=19% Similarity=0.241 Sum_probs=215.6
Q ss_pred CCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
..+.+|.+.+.+++|+|++++|++|+.||+|+||++.... ....+..|..+|.+++|+|++++|++|+.|++|
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-------eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 3567888999999999999999999999999999987543 234578899999999999999999999999999
Q ss_pred EEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC
Q 010037 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (519)
++||+.+++.+..+..+...+.++.+.+... ..+.++.++.+.+|+.... ......+.+|.
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~----------------~l~sgs~D~~v~lWd~~~~---~~~~~~~~~h~ 140 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP----------------YVLSGSDDLTVKLWNWENN---WALEQTFEGHE 140 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSS----------------EEEEEETTSCEEEEEGGGT---TEEEEEECCCC
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCC----------------EEEEECCCCeEEEEECCCC---cchhhhhcccC
Confidence 9999999999988888888888887766542 2245566777888875432 12356788999
Q ss_pred CCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeC-CCCEEEEEeCCCeEEEEEcCCCcE
Q 010037 389 SEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPV-DDNYFISGSIDGKVRIWEVRRCQV 463 (519)
Q Consensus 389 ~~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~-d~~~l~sgs~Dg~V~iwd~~~~~~ 463 (519)
..|.+++|+|. + .|++|+.|++|++||+++..+...+. |...+..+.|+|. ++.+|++|+.|++|+|||++++++
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 99999999994 5 99999999999999998877665553 6788999999873 567999999999999999999987
Q ss_pred E-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 464 V-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 464 ~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
+ .+.+|...|++++|+|++++|++|+.||.|++||+.++++...
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 7 5788999999999999999999999999999999998876543
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.5e-34 Score=294.00 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=218.8
Q ss_pred CCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
..+.+|...+.+++|+|++.+|++|+.||+|+||++.... ....+.+|.+.|++++|+|++++|++|+.|++|
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-------~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-------FERTLKGHTDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-------CCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 3467788899999999999999999999999999987544 234688999999999999999999999999999
Q ss_pred EEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC
Q 010037 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (519)
+|||+.+++++..+..+...+.++.|.++.. ..+.++.++.+.+|+... +..+..+.+|.
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~----------------~l~s~s~D~~i~~wd~~~----~~~~~~~~~h~ 234 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGD----------------HIVSASRDKTIKMWEVQT----GYCVKTFTGHR 234 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSS----------------EEEEEETTSEEEEEETTT----CCEEEEEECCS
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCC----------------EEEEEeCCCeEEEEECCC----CcEEEEEeCCC
Confidence 9999999998888888877777777766432 124556677888888764 34577889999
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCC-------------------CCEEEEE
Q 010037 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVD-------------------DNYFISG 447 (519)
Q Consensus 389 ~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d-------------------~~~l~sg 447 (519)
..|.+++|+|++ +|++|+.|++|++||+.++++...+. |...|++++|+|.. +.+|++|
T Consensus 235 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE
Confidence 999999999999 99999999999999999999988885 99999999999931 6799999
Q ss_pred eCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 448 SIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 448 s~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
+.|++|++||+++++++ .+.+|...|++++|+|+|++|++|+.||.|++||+.++++.
T Consensus 315 s~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred eCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 99999999999999877 57789999999999999999999999999999999887654
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=287.06 Aligned_cols=248 Identities=14% Similarity=0.181 Sum_probs=201.5
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEec
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~ 313 (519)
+...+.+++|+|++ .|++|+.||+|+|||+........ ....+.+|.+.|++|+|+|+|++|++|+.||+|++||+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~---~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIV---SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEE---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeE---eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 44567889999985 678999999999999986543221 11235689999999999999999999999999999999
Q ss_pred ccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe--eccCCCe
Q 010037 314 IEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF--QGHSSEV 391 (519)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~V 391 (519)
.+++++..+..+...+.++.|.+.....+ +.++.++.+.+|+.... ++...+ ..|...+
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l---------------~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~~~~ 217 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVF---------------LSCSEDNRILLWDTRCP----KPASQIGCSAPGYLP 217 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEE---------------EEEETTSCEEEEETTSS----SCEEECC----CCCE
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCce---------------eeecccccccccccccc----ceeeeeecceeeccc
Confidence 99999999988888888888876654433 23455667778876543 333433 3466789
Q ss_pred eEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeecc
Q 010037 392 LDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD 468 (519)
Q Consensus 392 ~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 468 (519)
.+++|+|++ +|++|+.|++|+|||+++++++..+. |...|++|+|+|...++|++|+.|++|+|||+++++++...+
T Consensus 218 ~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~ 297 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA 297 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC
T ss_pred eeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC
Confidence 999999965 88999999999999999999998886 999999999999334789999999999999999999999999
Q ss_pred CCCceEEEEEeeCCC-EEEEEecCCeEEEEECCCCee
Q 010037 469 IREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 469 ~~~~V~~v~~spdg~-~l~sgs~dg~v~iwdl~~~~l 504 (519)
|.+.|++++|+|+++ +|++|+.||+|++|++.+..+
T Consensus 298 H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 298 HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999999999999986 567899999999999987654
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=281.84 Aligned_cols=251 Identities=16% Similarity=0.274 Sum_probs=212.9
Q ss_pred CeeeEeecccceeecCC----CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC
Q 010037 230 AMARIIDRHGSATLKPG----DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED 305 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~----g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D 305 (519)
....|.+.|.+++|+|+ +.+|++|+.|++|+||++...... ....+.+|...|.+++|++++.+|++++.|
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~-----~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD-----LQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE-----EEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee-----eeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 34567888999999885 668999999999999998754322 223578999999999999999999999999
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
++|++||+.+++.+..+..+...+.++.|.++... .+.++.++.+.+|+... .+....+.
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~----------------l~~g~~dg~v~i~~~~~----~~~~~~~~ 161 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY----------------LATGTHVGKVNIFGVES----GKKEYSLD 161 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSE----------------EEEECTTSEEEEEETTT----CSEEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCE----------------EEEEcCCCcEEEEEcCC----CceeEEec
Confidence 99999999999998888877777777777665421 23345566677776654 34466778
Q ss_pred ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcE
Q 010037 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV 463 (519)
Q Consensus 386 ~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~ 463 (519)
.|...|.+++|+|++ +|++|+.|+.|++||+++++++..+. |...|++++|+| ++++|++|+.|++|+|||+++++.
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANL 240 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcce
Confidence 899999999999999 99999999999999999999999886 899999999999 999999999999999999999887
Q ss_pred E-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 464 V-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 464 ~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+ .+..|...|++++|+|+|++|++++.||.|++||+.+++++.
T Consensus 241 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 241 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 7 577899999999999999999999999999999999887654
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-33 Score=281.11 Aligned_cols=249 Identities=18% Similarity=0.323 Sum_probs=207.6
Q ss_pred cCCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCc
Q 010037 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT 307 (519)
Q Consensus 228 ~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~ 307 (519)
...+.+|...+.+++|+|++++|++|+.||+|+||+...... ...+..|...|.+++|+|++++|++|+.|+.
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~ 120 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK-------VHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE-------EEEEECSSSCEEEEEECTTSSEEEEEETTCE
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc-------ceEeecCCccEEEEEECCCCCEEEEEeCCCe
Confidence 345677888899999999999999999999999999875432 3457789999999999999999999999999
Q ss_pred EEEEecccCe----eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 308 VRVWKVIEHE----RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 308 I~iWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
|++|++.+.. ....+..+...+.++.+.+.. ..+.++.++.+.+|+... .+.+..
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------------~l~s~s~d~~i~~wd~~~----~~~~~~ 179 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-----------------QIVTSSGDTTCALWDIET----GQQTTT 179 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-----------------EEEEEETTSCEEEEETTT----TEEEEE
T ss_pred EEEEECccCCCcceeEEEecCCCccEEEEEECCCC-----------------cEEEEECCCcEEEEECCC----CcEEEE
Confidence 9999997653 333444555555555554332 124456677888887754 345678
Q ss_pred eeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC
Q 010037 384 FQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (519)
Q Consensus 384 ~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~ 461 (519)
+.+|...|.+++|+|++ +|++|+.|++|++||++++.++..+. |...|++++|+| ++++|++|+.||+|++||++++
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCC
Confidence 88999999999999999 99999999999999999999998886 999999999999 9999999999999999999998
Q ss_pred cEEeeccC---CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 462 QVVDYTDI---REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 462 ~~~~~~~~---~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
+.+....+ ...|++++|+|+|++|++|+.||.|++||+.+++..
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 87654333 347999999999999999999999999999876653
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-34 Score=292.24 Aligned_cols=242 Identities=18% Similarity=0.316 Sum_probs=207.0
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+.+|.+.+.+++|+|++.+|++|+.|++|+||++.... ....+.+|...|.+++|+|++++|++|+.|++|++
T Consensus 146 l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~-------~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~ 218 (410)
T 1vyh_C 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-------CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 218 (410)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC-------EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred EeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-------eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 45577788889999999999999999999999987433 23456789999999999999999999999999999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
||+.++.++..+..+...+.++.+.++.. ..+.++.++.+.+|+... ......+.+|...
T Consensus 219 wd~~~~~~~~~~~~h~~~v~~~~~~~~g~----------------~l~s~s~D~~v~vwd~~~----~~~~~~~~~h~~~ 278 (410)
T 1vyh_C 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGT----------------LIASCSNDQTVRVWVVAT----KECKAELREHRHV 278 (410)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTT----CCEEEEECCCSSC
T ss_pred EECCCCcEEEEEeCCCccEEEEEECCCCC----------------EEEEEcCCCeEEEEECCC----CceeeEecCCCce
Confidence 99999998888877766666655544321 223456677788887654 3456778899999
Q ss_pred eeEEEEcCC--------------------C-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEe
Q 010037 391 VLDLSWSKN--------------------G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGS 448 (519)
Q Consensus 391 V~~l~~sp~--------------------~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs 448 (519)
|.+++|+|+ + +|++|+.|++|++||++++.++..+. |...|++++|+| ++.+|++|+
T Consensus 279 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s 357 (410)
T 1vyh_C 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCA 357 (410)
T ss_dssp EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSCEEEEE
T ss_pred EEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC-CCCEEEEEe
Confidence 999999995 5 89999999999999999999998886 999999999999 999999999
Q ss_pred CCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 449 IDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 449 ~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
.||+|+|||+.+++++ .+..|...|++++|+|++.+|++|+.||.|+||+++
T Consensus 358 ~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp TTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999988766 577899999999999999999999999999999864
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.3e-33 Score=279.91 Aligned_cols=254 Identities=19% Similarity=0.252 Sum_probs=212.5
Q ss_pred cccCCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccc---------------------------------
Q 010037 226 KKLGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS--------------------------------- 272 (519)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~--------------------------------- 272 (519)
+....+.+|.+.+.+++|+|++.+|++|+.||+|+||+.........
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34456778888899999999999999999999999999754332110
Q ss_pred --------cccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEE
Q 010037 273 --------SLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIP 344 (519)
Q Consensus 273 --------~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (519)
.......+.+|.+.|.++.|+|++.+|++|+.|++|++||+.+++.+..+..+...+.++.+.+.....
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~--- 211 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN--- 211 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC---
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC---
Confidence 011234567899999999999999999999999999999999999988888877777777766543322
Q ss_pred eeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEE
Q 010037 345 IDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLR 423 (519)
Q Consensus 345 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~ 423 (519)
..+.++.++.+.+|+... .+++..+.+|...|.+++|+|++ +|++++.|++|++||+++++.+.
T Consensus 212 -----------~l~sgs~Dg~v~~wd~~~----~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 212 -----------TFVSGGCDKKAMVWDMRS----GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp -----------EEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred -----------EEEEEeCCCeEEEEECCC----CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 223456677888888765 34577889999999999999999 99999999999999999998888
Q ss_pred Eec---CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEE
Q 010037 424 VFS---HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 424 ~~~---h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwd 498 (519)
.+. +...+++++|+| ++.+|++|+.|++|+|||+.+++.+ .+..|...|++++|+|||++|++|+.||.|+||+
T Consensus 277 ~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 277 IYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECCTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEcCCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 775 345789999999 9999999999999999999988766 5778999999999999999999999999999996
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.7e-33 Score=281.73 Aligned_cols=205 Identities=15% Similarity=0.228 Sum_probs=173.1
Q ss_pred eecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeec
Q 010037 280 FLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLR 359 (519)
Q Consensus 280 l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (519)
..+|.+.|++|+|+|++++|++|+.||+|++||+.+++.+..+..+...+.++.+.+.....++ .
T Consensus 135 ~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~---------------s 199 (357)
T 4g56_B 135 KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFL---------------S 199 (357)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEE---------------E
T ss_pred cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceee---------------e
Confidence 3479999999999999999999999999999999999998888888888878777665543332 3
Q ss_pred cCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEE
Q 010037 360 KSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAF 436 (519)
Q Consensus 360 ~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~f 436 (519)
++.++.+.+|+....... ....+..|...+.+++|+|++ +|++|+.|+.|++||+++++++..+. |...|++++|
T Consensus 200 ~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~ 277 (357)
T 4g56_B 200 CGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAY 277 (357)
T ss_dssp EETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEE
T ss_pred eccCCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEE
Confidence 445667788876543221 112234577889999999986 88999999999999999999888886 8999999999
Q ss_pred eeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEee-CCCEEEEEecCCeEEEEECCC
Q 010037 437 NPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCP-DGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 437 sp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~sp-dg~~l~sgs~dg~v~iwdl~~ 501 (519)
+|.+.++|++|+.|++|+|||+++++++....|...|++++|+| |+++|++|+.||.|++|++.+
T Consensus 278 sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 278 SYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred cCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 99445789999999999999999999998889999999999999 899999999999999999965
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=274.48 Aligned_cols=242 Identities=21% Similarity=0.278 Sum_probs=209.4
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+.+|...+.+++++|++.++++|+.|++|++||+..... ...+..|...+.+++|+|++++|++|+.||.|++
T Consensus 76 l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~-------~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 76 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ-------IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNI 148 (321)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEE
T ss_pred eccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE-------EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEE
Confidence 456677788899999999999999999999999875442 2356788999999999999999999999999999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
|++.+++....+..+...+.++.+.++.. ..+.++.++.+.+|+... .+.+..+.+|...
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~----------------~lasg~~dg~i~iwd~~~----~~~~~~~~~h~~~ 208 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGK----------------YLASGAIDGIINIFDIAT----GKLLHTLEGHAMP 208 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTT----TEEEEEECCCSSC
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCC----------------EEEEEcCCCeEEEEECCC----CcEEEEEcccCCc
Confidence 99999988777776666666666655432 123455667777887654 3457788999999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eec
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYT 467 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~ 467 (519)
|.+++|+|++ +|++++.|++|+|||+++++++..+. |...|++++|+| ++.+|++|+.|++|+|||+++++++ .+.
T Consensus 209 v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 209 IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 9999999999 99999999999999999999988886 999999999999 9999999999999999999999887 577
Q ss_pred cCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 468 ~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
.|...|++++|+|+|++|++++.||.|+|||+.
T Consensus 288 ~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 288 DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 899999999999999999999999999999963
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.1e-32 Score=274.83 Aligned_cols=240 Identities=18% Similarity=0.278 Sum_probs=204.8
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEec
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~ 313 (519)
+...+.+++|+|++.+|++|+.|+.|++|++...... ......+.+|.+.|.++.|++++. |++++.|++|++||+
T Consensus 96 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~ 171 (340)
T 1got_B 96 RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN---VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDI 171 (340)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS---CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEET
T ss_pred CCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc---ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEEC
Confidence 4455677899999999999999999999998754321 223346789999999999998875 889999999999999
Q ss_pred ccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeE
Q 010037 314 IEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (519)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 393 (519)
.+++....+..+...+.++.+.++.. ..+.++.++.+.+|+... ...+..+.+|...|.+
T Consensus 172 ~~~~~~~~~~~h~~~v~~~~~~~~~~----------------~l~sg~~d~~v~~wd~~~----~~~~~~~~~h~~~v~~ 231 (340)
T 1got_B 172 ETGQQTTTFTGHTGDVMSLSLAPDTR----------------LFVSGACDASAKLWDVRE----GMCRQTFTGHESDINA 231 (340)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTT----CSEEEEECCCSSCEEE
T ss_pred CCCcEEEEEcCCCCceEEEEECCCCC----------------EEEEEeCCCcEEEEECCC----CeeEEEEcCCcCCEEE
Confidence 99998888887777777777665432 223456677788887654 3457788999999999
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCC---CcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eecc
Q 010037 394 LSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHN---NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTD 468 (519)
Q Consensus 394 l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~---~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~ 468 (519)
++|+|++ +|++|+.|++|++||+++++.+..+.|. ..|++++|+| ++.+|++|+.|+.|++||+.+++.+ .+.+
T Consensus 232 v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~ 310 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAG 310 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeec
Confidence 9999999 9999999999999999999998888754 4799999999 9999999999999999999988776 5788
Q ss_pred CCCceEEEEEeeCCCEEEEEecCCeEEEEE
Q 010037 469 IREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 469 ~~~~V~~v~~spdg~~l~sgs~dg~v~iwd 498 (519)
|...|++++|+|+|++|++|+.||.|+|||
T Consensus 311 h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999997
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=276.96 Aligned_cols=263 Identities=16% Similarity=0.153 Sum_probs=201.0
Q ss_pred ccccccCCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccc----cccccccccceeecCCCCEEEEEEccCCCE
Q 010037 223 GWLKKLGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQS----RELSSLYTGQEFLAHEGSILTMKFSLDGQY 298 (519)
Q Consensus 223 ~w~~~~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~----~~~~~~~~~~~l~~H~~~I~~l~fspdg~~ 298 (519)
.|..+.....++...+.+++|+|||.+|++++ |+++++|+..... ..............|...|.+++|+|++ +
T Consensus 18 ~w~~~~~~~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~ 95 (344)
T 4gqb_B 18 EWNLPPNAPACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-G 95 (344)
T ss_dssp -----CCSCSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-E
T ss_pred ccCCCCCCcccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-e
Confidence 34444444455666678899999999998877 7778888632110 0000111122334577899999999985 6
Q ss_pred EEEEeCCCcEEEEecccCeeeceee----ccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccc
Q 010037 299 LASGGEDGTVRVWKVIEHERLDGFD----VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (519)
Q Consensus 299 LaSgs~Dg~I~iWd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 374 (519)
|++|+.||+|+|||+.+++....+. .|...+.++.|.++.. ..+.++.++.+.+|+...
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~----------------~l~sgs~d~~i~iwd~~~- 158 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT----------------QAVSGSKDICIKVWDLAQ- 158 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTT-
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC----------------EEEEEeCCCeEEEEECCC-
Confidence 8899999999999999887654432 4555666666655432 234566777888887764
Q ss_pred cccccceeEeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec---CCCcEEEEEEeeCCCCEEEEEeC
Q 010037 375 RLLEKPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSI 449 (519)
Q Consensus 375 ~~~~~~~~~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~---h~~~V~~v~fsp~d~~~l~sgs~ 449 (519)
++.+..+.+|...|.+++|+|++ +|++++.|++|+|||+++++++..+. +...+++++|+|.++++|++|+.
T Consensus 159 ---~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 159 ---QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp ---TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred ---CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 45678899999999999999987 78999999999999999999888874 66789999999977889999999
Q ss_pred CCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCC-CEEEEEecCCeEEEEECCCCeeeec
Q 010037 450 DGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 450 Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg-~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
||+|+|||+++++++ .+..|...|++++|+|+| ++|++|+.||.|+|||+.+++++.+
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 999999999998876 578899999999999998 5799999999999999999887654
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-32 Score=272.60 Aligned_cols=290 Identities=16% Similarity=0.213 Sum_probs=224.0
Q ss_pred hhhhhhcccccCC----CcccccccccCCCCCCccccccCCccccccccchhhhhhhhccccccccCCeeeEeeccccee
Q 010037 167 EIEIESRLQESGS----SQSVSFDEFLGTPGSSSSFVQPLPSRQDEESRDLVDAKRKVKRGWLKKLGAMARIIDRHGSAT 242 (519)
Q Consensus 167 ~~~~~~~l~~v~~----~~~l~~~~f~~~~~~s~~~v~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 242 (519)
+|... |..+.. ++.|.....++++. +|.+...+. ....+...+.+|...+.+++
T Consensus 15 gH~~~--V~~l~~~~~~~~~l~s~s~D~~v~-----~W~~~~~~~---------------~~~~~~~~~~~h~~~v~~~~ 72 (319)
T 3frx_A 15 GHNGW--VTSLATSAGQPNLLLSASRDKTLI-----SWKLTGDDQ---------------KFGVPVRSFKGHSHIVQDCT 72 (319)
T ss_dssp CCSSC--EEEEEECSSCTTEEEEEETTSEEE-----EEEEEEETT---------------EEEEEEEEEECCSSCEEEEE
T ss_pred cccce--EEEEEccCCCccEEEEecCCccEE-----EecCCCCCc---------------cccccceEEeCCcccEEEEE
Confidence 45544 555543 35677777777777 776543211 01122344567778888899
Q ss_pred ecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeecee
Q 010037 243 LKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGF 322 (519)
Q Consensus 243 ~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~ 322 (519)
|+|++.+|++|+.|++|+|||+.... ..+.+.+|...|.+++|+|++.+|++|+.|++|++||+. +.++..+
T Consensus 73 ~s~dg~~l~s~s~D~~v~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~ 144 (319)
T 3frx_A 73 LTADGAYALSASWDKTLRLWDVATGE-------TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATL 144 (319)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCC-------eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEE
Confidence 99999999999999999999987543 234678999999999999999999999999999999996 4455555
Q ss_pred eccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-e
Q 010037 323 DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-F 401 (519)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~ 401 (519)
..+...+..+.+.+.... .......+.++.++.+.+|+.... +....+.+|...|.+++|+|++ +
T Consensus 145 ~~h~~~v~~~~~~~~~~~----------~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 145 LGHNDWVSQVRVVPNEKA----------DDDSVTIISAGNDKMVKAWNLNQF----QIEADFIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp CCCSSCEEEEEECCC----------------CCEEEEEETTSCEEEEETTTT----EEEEEECCCCSCEEEEEECTTSSE
T ss_pred eccCCcEEEEEEccCCCC----------CCCccEEEEEeCCCEEEEEECCcc----hhheeecCCCCcEEEEEEcCCCCE
Confidence 555555555555543211 001223456677888888887653 3456788999999999999999 9
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee---------ccCCCc
Q 010037 402 LLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY---------TDIREI 472 (519)
Q Consensus 402 L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~---------~~~~~~ 472 (519)
|++++.|++|+|||+.+++++..+.+...|.+++|+| ++.+|++++.+ .+++|++.....+.. ..+...
T Consensus 211 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (319)
T 3frx_A 211 IASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSP-NRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPH 288 (319)
T ss_dssp EEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECS-SSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcC-CCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcc
Confidence 9999999999999999999999999888999999999 89999988754 599999998766532 234567
Q ss_pred eEEEEEeeCCCEEEEEecCCeEEEEECCCC
Q 010037 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~dg~v~iwdl~~~ 502 (519)
+.+++|+|||++|++|+.||.|+|||+.++
T Consensus 289 v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 289 AVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred eeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 999999999999999999999999998654
No 13
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.5e-32 Score=270.92 Aligned_cols=266 Identities=15% Similarity=0.214 Sum_probs=203.2
Q ss_pred CeeeEeecccceeecCC-CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 230 AMARIIDRHGSATLKPG-DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~-g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
++.+|.+.|.+++|+|+ +++||+|+.||+|+||++...... .....+.+.+|...|.+++|+|++++|++|+.|+.|
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~--~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN--YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC--SEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc--cceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 47789999999999998 579999999999999998765432 122345688999999999999999999999999999
Q ss_pred EEEecccCeeeceeeccCCCCceEEEeecCCC--------CeEEeeccCCcee---------------------eeeeec
Q 010037 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLS--------QLIPIDVDKEKID---------------------KTKSLR 359 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---------------------~~~~~~ 359 (519)
++|+.....................+.+.... .+..+........ ....+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 99999888776666555544444433332211 1111111110000 011123
Q ss_pred cCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEee
Q 010037 360 KSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNP 438 (519)
Q Consensus 360 ~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp 438 (519)
++.+..+.+|+... .+.+..+.+|...|++++|+|++ +|++|+.|++|++||+++.+++..+.+...|++++|+|
T Consensus 191 ~~~d~~i~i~d~~~----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~ 266 (340)
T 4aow_A 191 CGWDKLVKVWNLAN----CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSP 266 (340)
T ss_dssp EETTSCEEEEETTT----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred EcCCCEEEEEECCC----CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCC
Confidence 34455555665543 34567788999999999999999 99999999999999999999999999889999999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCcEEe----------eccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 439 VDDNYFISGSIDGKVRIWEVRRCQVVD----------YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 439 ~d~~~l~sgs~Dg~V~iwd~~~~~~~~----------~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
++. +++++.|+.|+|||++++..+. ...|...|++++|+|||++|++|+.||.|+|||+++|+
T Consensus 267 -~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 267 -NRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -SSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred -CCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 665 5556679999999999876552 23578899999999999999999999999999998874
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.2e-32 Score=267.27 Aligned_cols=248 Identities=17% Similarity=0.253 Sum_probs=195.6
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc--CCCEEEEEeCCCcE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--DGQYLASGGEDGTV 308 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--dg~~LaSgs~Dg~I 308 (519)
+.+|.+.+.+++|+|+|++||+|+.|++|+||++..... .....+.+|.++|++++|++ ++++||||+.||+|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-----~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-----EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 445777888999999999999999999999999864321 23356889999999999986 48999999999999
Q ss_pred EEEecccCe--eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 309 RVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 309 ~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
+|||+.+++ .+..+..+...+.++.|.+...... .+.++.++.+.+|+...... .....+.+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~--------------l~s~s~d~~v~~wd~~~~~~--~~~~~~~~ 143 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPM--------------LLVASSDGKVSVVEFKENGT--TSPIIIDA 143 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSE--------------EEEEETTSEEEEEEBCSSSC--BCCEEEEC
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcE--------------EEEEECCCcEEEEEecCCCc--eeeeeeec
Confidence 999998774 3344455566666777766532221 23445566677776543211 11356789
Q ss_pred cCCCeeEEEEcCC-------------C-eEEEEeCCCcEEEEECCCCe----EEEEec-CCCcEEEEEEeeCC---CCEE
Q 010037 387 HSSEVLDLSWSKN-------------G-FLLSSSADKTVRLWQVGIDR----CLRVFS-HNNYVTSVAFNPVD---DNYF 444 (519)
Q Consensus 387 h~~~V~~l~~sp~-------------~-~L~sgs~Dg~V~lWdl~~~~----~~~~~~-h~~~V~~v~fsp~d---~~~l 444 (519)
|...|.+++|+|+ + +|++|+.|++|+|||++++. ++..+. |...|++|+|+| + +.+|
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp-~~~~~~~l 222 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYM 222 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEE
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC-CCCCceEE
Confidence 9999999999996 4 89999999999999998765 555564 999999999999 6 4899
Q ss_pred EEEeCCCeEEEEEcCCCc---E-E--eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 445 ISGSIDGKVRIWEVRRCQ---V-V--DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 445 ~sgs~Dg~V~iwd~~~~~---~-~--~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
++|+.|++|+|||+++.. . . ....|...|.+++|+|+|++|++++.||.|+||+..
T Consensus 223 as~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 999999999999998743 1 1 224678899999999999999999999999999986
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.8e-32 Score=269.17 Aligned_cols=255 Identities=19% Similarity=0.261 Sum_probs=214.1
Q ss_pred ccCCeeeEeecccceeecCCC-CeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC
Q 010037 227 KLGAMARIIDRHGSATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED 305 (519)
Q Consensus 227 ~~~~~~~~~~~~~~~~~sp~g-~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D 305 (519)
..+.+.+|.+.+.+++|+|++ .+|++|+.|++|++|++....... ......+.+|...|.+++|+|++++|++|+.|
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~--~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF--GVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE--EEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc--cccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 344677888999999999965 899999999999999986433211 12335688999999999999999999999999
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
++|+|||+.+++.+..+..+...+.++.+.+... ..+.++.++.+.+|+.. ...+..+.
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~----------------~l~s~s~D~~i~vwd~~-----~~~~~~~~ 145 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS----------------MIISGSRDKTIKVWTIK-----GQCLATLL 145 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC----------------EEEEEETTSCEEEEETT-----SCEEEEEC
T ss_pred CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC----------------EEEEEeCCCeEEEEECC-----CCeEEEEe
Confidence 9999999999999888888877777777655431 23455667778787654 45677889
Q ss_pred ccCCCeeEEEEcCC------C-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEE
Q 010037 386 GHSSEVLDLSWSKN------G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (519)
Q Consensus 386 ~h~~~V~~l~~sp~------~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd 457 (519)
+|...|.+++|+|. + .|++++.|++|++||+++.+....+. |...|++++|+| ++.+|++|+.||+|+|||
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWN 224 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEE
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Confidence 99999999999984 3 79999999999999999999888775 999999999999 999999999999999999
Q ss_pred cCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 458 VRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 458 ~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+.+++.+....+...|.+++|+|++.+|++++.+ .+++|++..+.+..
T Consensus 225 ~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~ 272 (319)
T 3frx_A 225 LAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVD 272 (319)
T ss_dssp TTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEE
T ss_pred CCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeee
Confidence 9999988666667889999999999999888754 59999998776543
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.3e-32 Score=272.69 Aligned_cols=269 Identities=17% Similarity=0.214 Sum_probs=208.1
Q ss_pred ccCCeeeEeecccceee-----cC-CCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEE
Q 010037 227 KLGAMARIIDRHGSATL-----KP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA 300 (519)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-----sp-~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La 300 (519)
....+.+|.+.|.+++| +| ++.+|++|+.|++|+||++...............+.+|...|.+++|+|++.+|+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 34457788888999998 66 9999999999999999998754322111223356789999999999999999999
Q ss_pred EEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCC--------eEEeeccCCceee------------------
Q 010037 301 SGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQ--------LIPIDVDKEKIDK------------------ 354 (519)
Q Consensus 301 Sgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~------------------ 354 (519)
+|+.|++|++||+.+++.+..+..+...+.++.|.++.... +..+.........
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 99999999999999999988888888888888887764322 1122211100000
Q ss_pred ------------eeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEEC-CCCe
Q 010037 355 ------------TKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQV-GIDR 420 (519)
Q Consensus 355 ------------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl-~~~~ 420 (519)
...+.++.++.+.+|+.. ......+.+|...|.+++|+|++ +|++|+.|++|++||+ ....
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-----~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTN-----FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETT-----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCC-----CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 122344556666666632 34566788999999999999999 9999999999999999 4555
Q ss_pred EEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE---eec-----------cCCCceEEEEEeeCCCEEE
Q 010037 421 CLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV---DYT-----------DIREIVSAVCYCPDGKGGI 486 (519)
Q Consensus 421 ~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~---~~~-----------~~~~~V~~v~~spdg~~l~ 486 (519)
+...+.+...|++++|+| ++.++++| .|+.|++||+.+++.. .+. .|...|++++|+|+|++|+
T Consensus 248 ~~~~~~~~~~v~~v~~sp-~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~ 325 (343)
T 2xzm_R 248 PQREFDAGSTINQIAFNP-KLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLF 325 (343)
T ss_dssp CSEEEECSSCEEEEEECS-SSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEE
T ss_pred cceeecCCCcEEEEEECC-CCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEE
Confidence 666666777899999999 88887765 5788999999876533 121 5777899999999999999
Q ss_pred EEecCCeEEEEECCCC
Q 010037 487 VGTMTGNCRFYDIKGM 502 (519)
Q Consensus 487 sgs~dg~v~iwdl~~~ 502 (519)
+|+.||.|++|++.++
T Consensus 326 sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 326 AGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEETTSEEEEEEEEEE
T ss_pred EecCCceEEEEEEEcc
Confidence 9999999999998754
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.6e-33 Score=282.03 Aligned_cols=280 Identities=18% Similarity=0.258 Sum_probs=219.8
Q ss_pred CcccccccccCCCCCCccccccCCccccccccchhhhhhhhccccccccCCeeeEeecccceeecCCCCeEEeeecCCeE
Q 010037 180 SQSVSFDEFLGTPGSSSSFVQPLPSRQDEESRDLVDAKRKVKRGWLKKLGAMARIIDRHGSATLKPGDHELTLGQRMRRV 259 (519)
Q Consensus 180 ~~~l~~~~f~~~~~~s~~~v~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I 259 (519)
++.|..+..++++. +|.+...+. ...+..|...+.+++|+|++++|++|+.|+.|
T Consensus 78 ~~~l~s~s~D~~v~-----iWd~~~~~~--------------------~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 78 KNWIVSASQDGRLI-----VWNALTSQK--------------------THAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp SSCEEEEETTSEEE-----EEETTTTEE--------------------EEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred CCEEEEEeCCCeEE-----EEECCCCcc--------------------ceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 66777777777777 886543211 11233455667789999999999999999999
Q ss_pred EEeeCCccccccccccccceeecCCCCEEEEEEccC-CCEEEEEeCCCcEEEEecccCeeeceee-----ccCCCCceEE
Q 010037 260 RVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWKVIEHERLDGFD-----VQDTDPSCLY 333 (519)
Q Consensus 260 ~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~LaSgs~Dg~I~iWd~~~~~~~~~~~-----~~~~~~~~~~ 333 (519)
+||++...............+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+. .+...+.++.
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999997544332333444567899999999999996 4579999999999999999998776552 2222233333
Q ss_pred EeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEE
Q 010037 334 FTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVR 412 (519)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~ 412 (519)
+.+.. ....+.++.++.+.+|+.+. ...++..+.+|...|.+++|+|++ +|++|+.|++|+
T Consensus 213 ~~~~~---------------~~~l~sgs~D~~v~~wd~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 274 (380)
T 3iz6_a 213 INSLN---------------ANMFISGSCDTTVRLWDLRI---TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCR 274 (380)
T ss_dssp ECSSS---------------CCEEEEEETTSCEEEEETTT---TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEE
T ss_pred eecCC---------------CCEEEEEECCCeEEEEECCC---CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEE
Confidence 32211 12334567788888887653 235677889999999999999999 999999999999
Q ss_pred EEECCCCeEEEEecC--------CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-e----ccCCCceEEEEEe
Q 010037 413 LWQVGIDRCLRVFSH--------NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-Y----TDIREIVSAVCYC 479 (519)
Q Consensus 413 lWdl~~~~~~~~~~h--------~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~----~~~~~~V~~v~~s 479 (519)
|||+++++++..+.. ...|++++|+| ++.+|++|+.||.|++||+.+++.+. + ..|...|++++|+
T Consensus 275 lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s 353 (380)
T 3iz6_a 275 LFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLS 353 (380)
T ss_dssp EEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEEC
T ss_pred EEECCCCcEEEEecccccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEEC
Confidence 999999999988752 23489999999 99999999999999999999887763 3 5788999999999
Q ss_pred eCCCEEEEEecCCeEEEEECCCCe
Q 010037 480 PDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 480 pdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
|+|++|++|+.||.|+||++.+.+
T Consensus 354 ~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 354 SDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999999998754
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.7e-31 Score=259.33 Aligned_cols=250 Identities=20% Similarity=0.337 Sum_probs=208.1
Q ss_pred CCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
..+.+|...+.+++|+|++++|++|+.||.|+||+...... .+.+.+|...|.+++|+|++++|++|+.||.|
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~-------~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-------EKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------EEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc-------chhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 34667888889999999999999999999999999875432 24578899999999999999999999999999
Q ss_pred EEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC
Q 010037 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (519)
++||+.+++.+..+..+...+.++.+.+... ..+.++.++.+.+|+... .+.+..+..|.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~ 149 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN----------------LIVSGSFDESVRIWDVKT----GKCLKTLPAHS 149 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSS----------------EEEEEETTSCEEEEETTT----CCEEEEECCCS
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCC----------------EEEEEeCCCcEEEEECCC----CEEEEEecCCC
Confidence 9999999998888887777777776665432 223455667788887654 34567788999
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 389 ~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
..|.+++|+|++ +|++++.|+.|++||+++++++..+. +...+.+++|+| ++++|++++.|+.|++||+++++.+.
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 999999999999 99999999999999999999888774 677899999999 99999999999999999999998774
Q ss_pred -eccCCCce---EEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 466 -YTDIREIV---SAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 466 -~~~~~~~V---~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+..|...+ ......+++.+|++|+.||.|++||+.+++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 273 (312)
T 4ery_A 229 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 273 (312)
T ss_dssp EECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEE
T ss_pred EEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhh
Confidence 55554432 223334678999999999999999999887654
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-30 Score=281.90 Aligned_cols=244 Identities=16% Similarity=0.230 Sum_probs=199.1
Q ss_pred ecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q 010037 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~ 315 (519)
....+++|+|+|++||+++ ++.|+||++.... ....+.+|...|++++|+|+|++||+|+.||+|+|||+.+
T Consensus 19 g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~-------~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT-------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp TCCCCCEECTTSSEEEEEE-TTEEEEEETTCSS-------CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred CceeEEeeCCCCCEEEeCC-CCEEEEecCCCcc-------cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCC
Confidence 4445689999999999987 5799999986432 3346789999999999999999999999999999999975
Q ss_pred Ce--eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeE
Q 010037 316 HE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (519)
Q Consensus 316 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 393 (519)
++ ....+..+...+.++.|.++.... +...... ...+.+.+|+. +.....+.+|...|.+
T Consensus 91 ~~~~~~~~~~~~~~~v~~v~fs~dg~~l-~~~~~~~-----------~~~~~v~~wd~------~~~~~~l~gh~~~v~~ 152 (611)
T 1nr0_A 91 TTHILKTTIPVFSGPVKDISWDSESKRI-AAVGEGR-----------ERFGHVFLFDT------GTSNGNLTGQARAMNS 152 (611)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEE-EEEECCS-----------SCSEEEEETTT------CCBCBCCCCCSSCEEE
T ss_pred CcceeeEeecccCCceEEEEECCCCCEE-EEEECCC-----------CceeEEEEeeC------CCCcceecCCCCCceE
Confidence 43 334556666677777777654321 1111110 11245666663 2345678899999999
Q ss_pred EEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeec---
Q 010037 394 LSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT--- 467 (519)
Q Consensus 394 l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~--- 467 (519)
++|+|++ .|++|+.|++|++||..+++++..+. |...|++++|+| ++++|++|+.|++|+|||+.+++.+...
T Consensus 153 v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~ 231 (611)
T 1nr0_A 153 VDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDD 231 (611)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCT
T ss_pred EEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccc
Confidence 9999998 69999999999999999999988886 999999999999 9999999999999999999998877432
Q ss_pred -----cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 468 -----DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 468 -----~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.|...|++++|+|+|++|++++.|+.|++||+.++++..
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK 275 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred cccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee
Confidence 689999999999999999999999999999999887543
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-31 Score=267.03 Aligned_cols=279 Identities=15% Similarity=0.146 Sum_probs=207.4
Q ss_pred CcccccccccCCCCCCccccccCCccccccccchhhhhhhhccccccccCCeeeEeecccceeecCCCCeEEeeecCCeE
Q 010037 180 SQSVSFDEFLGTPGSSSSFVQPLPSRQDEESRDLVDAKRKVKRGWLKKLGAMARIIDRHGSATLKPGDHELTLGQRMRRV 259 (519)
Q Consensus 180 ~~~l~~~~f~~~~~~s~~~v~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I 259 (519)
|+.|+....++++. +|.+..... ........+|...+.+++|+|++++|++|+.|+.|
T Consensus 28 g~~las~~~D~~i~-----iw~~~~~~~-----------------~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 28 GTLLASCGGDRRIR-----IWGTEGDSW-----------------ICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp SSCEEEEETTSCEE-----EEEEETTEE-----------------EEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCEEEEEcCCCeEE-----EEEcCCCcc-----------------eeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 66777777777766 775432210 00011123466778889999999999999999999
Q ss_pred EEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe---eeceeeccCCCCceEEEee
Q 010037 260 RVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE---RLDGFDVQDTDPSCLYFTI 336 (519)
Q Consensus 260 ~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~---~~~~~~~~~~~~~~~~~~~ 336 (519)
+||+...... .....+.+|.+.|.+++|+|++++|++|+.|++|++||+.++. ++..+..+...+.++.|.+
T Consensus 86 ~iw~~~~~~~-----~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 86 CIWKKNQDDF-----ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp EEEEECCC-E-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred EEEEccCCCe-----EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 9999874432 2234678999999999999999999999999999999998764 3344555555566666655
Q ss_pred cCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEE
Q 010037 337 NHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQ 415 (519)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWd 415 (519)
+.. ..+.++.++.+.+|+..... ......+.+|...|.+++|+|++ +|++++.|++|+|||
T Consensus 161 ~~~----------------~l~s~s~d~~i~~w~~~~~~--~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 161 SQE----------------LLASASYDDTVKLYREEEDD--WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp SSS----------------CEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCC----------------EEEEEeCCCcEEEEEecCCC--EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 432 12234455566666543211 12346788999999999999999 999999999999999
Q ss_pred CCCC---------------eEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc--------EE--eecc
Q 010037 416 VGID---------------RCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ--------VV--DYTD 468 (519)
Q Consensus 416 l~~~---------------~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~--------~~--~~~~ 468 (519)
+... +++..+. |...|++++|+| ++.+|++++.|+.|++|+..... .. ....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T 3fm0_A 223 QYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQA 301 (345)
T ss_dssp EECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTS
T ss_pred cccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccc
Confidence 6321 3444443 889999999999 89999999999999999987642 11 2357
Q ss_pred CCCceEEEEEeeCC-CEEEEEecCCeEEEEECCCCee
Q 010037 469 IREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 469 ~~~~V~~v~~spdg-~~l~sgs~dg~v~iwdl~~~~l 504 (519)
|...|++++|+|++ .+|++|+.||.|++|++.+++.
T Consensus 302 h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp SSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 88999999999998 4999999999999999987764
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.7e-31 Score=286.09 Aligned_cols=249 Identities=18% Similarity=0.245 Sum_probs=206.9
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC----C
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED----G 306 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D----g 306 (519)
+.+|.+.+.+++|+|+|++||+|+.||+|+|||+...... ....+.+|.++|.+++|+|+|++|++++.+ +
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~-----~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~ 129 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI-----LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 129 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-----EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce-----eeEeecccCCceEEEEECCCCCEEEEEECCCCcee
Confidence 4567788889999999999999999999999998643221 123578899999999999999999999875 3
Q ss_pred cEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 307 TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
.|++|| .+.....+..+...+.++.|.+.... ..+.++.++.+.+|+.... +.+..+.+
T Consensus 130 ~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~---------------~l~s~s~D~~v~lwd~~~~----~~~~~l~~ 188 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPF---------------RIISGSDDNTVAIFEGPPF----KFKSTFGE 188 (611)
T ss_dssp EEEETT--TCCBCBCCCCCSSCEEEEEECSSSSC---------------EEEEEETTSCEEEEETTTB----EEEEEECC
T ss_pred EEEEee--CCCCcceecCCCCCceEEEECCCCCe---------------EEEEEeCCCeEEEEECCCC----eEeeeecc
Confidence 677777 45566677777777777777765432 2345566777888875442 44677899
Q ss_pred cCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--------cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEE
Q 010037 387 HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (519)
Q Consensus 387 h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~--------~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd 457 (519)
|...|.+++|+|++ +|++++.|++|+|||+.+++++..+ .|...|++++|+| ++.+|++++.|++|+|||
T Consensus 189 H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 189 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWN 267 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred ccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEe
Confidence 99999999999999 9999999999999999999998887 5999999999999 999999999999999999
Q ss_pred cCCCcEEe--------------------------------------------eccCCCceEEEEEeeCCCEEEEEecCCe
Q 010037 458 VRRCQVVD--------------------------------------------YTDIREIVSAVCYCPDGKGGIVGTMTGN 493 (519)
Q Consensus 458 ~~~~~~~~--------------------------------------------~~~~~~~V~~v~~spdg~~l~sgs~dg~ 493 (519)
+.+++.+. ..+|...|++++|+|||++|++++.||.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~ 347 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGH 347 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc
Confidence 98865431 2368889999999999999999999999
Q ss_pred EEEEECCCCeeee
Q 010037 494 CRFYDIKGMQIFD 506 (519)
Q Consensus 494 v~iwdl~~~~l~~ 506 (519)
|++||+.+++...
T Consensus 348 v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 348 INSWDISTGISNR 360 (611)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEECCCCceee
Confidence 9999999876644
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.9e-31 Score=272.14 Aligned_cols=250 Identities=23% Similarity=0.370 Sum_probs=199.4
Q ss_pred CCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
..+.+|.+.|.+++|+|++++|++|+.||+|+||+...... ...+.+|...|.+++|+|+|++|++|+.|+.|
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~-------~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK-------THAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE-------EEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-------ceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 44677888999999999999999999999999999875432 34578899999999999999999999999999
Q ss_pred EEEecccCe-------eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccce
Q 010037 309 RVWKVIEHE-------RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL 381 (519)
Q Consensus 309 ~iWd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 381 (519)
++|++.+.. ....+..+...+..+.+.+.... ..+.++.++.+.+|+..... .+
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~---------------~l~s~s~D~~i~~wd~~~~~----~~ 193 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQET---------------RLITGSGDQTCVLWDVTTGQ----RI 193 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSS---------------CEEEECTTSCEEEECTTTCC----EE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCC---------------EEEEECCCCcEEEEEcCCCc----EE
Confidence 999996542 12223334444444433332221 23566778889999876532 23
Q ss_pred eEe-----eccCCCeeEEEEcC-CC-eEEEEeCCCcEEEEECC-CCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCe
Q 010037 382 HEF-----QGHSSEVLDLSWSK-NG-FLLSSSADKTVRLWQVG-IDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGK 452 (519)
Q Consensus 382 ~~~-----~~h~~~V~~l~~sp-~~-~L~sgs~Dg~V~lWdl~-~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~ 452 (519)
..+ .+|...|.+++|++ ++ +|++|+.|++|++||++ ..+++..+. |...|++++|+| ++.+|++|+.||+
T Consensus 194 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~ 272 (380)
T 3iz6_a 194 SIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGT 272 (380)
T ss_dssp EEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSC
T ss_pred EEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCe
Confidence 333 67999999999987 55 99999999999999998 456677765 999999999999 9999999999999
Q ss_pred EEEEEcCCCcEEee-ccC-------CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 453 VRIWEVRRCQVVDY-TDI-------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 453 V~iwd~~~~~~~~~-~~~-------~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
|+|||+++++.+.. ..+ ...|++++|+|+|++|++|+.||.|++||+.+++..
T Consensus 273 i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 273 CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 99999999887742 222 234899999999999999999999999999876654
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-31 Score=265.61 Aligned_cols=249 Identities=18% Similarity=0.210 Sum_probs=192.8
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc--CCCEEEEEeCCCcE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--DGQYLASGGEDGTV 308 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--dg~~LaSgs~Dg~I 308 (519)
+.+|.+.+.+++|+|+|++||+|+.|++|+||++...... ....+.+|.++|++++|++ ++++|+||+.|++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~-----~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-----LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE-----EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE-----EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 4568888999999999999999999999999998754321 2246789999999999986 48999999999999
Q ss_pred EEEecccCe--eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 309 RVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 309 ~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
++||+.++. ....+..+...+.++.|.+.....++ +.++.++.+.+|+...... ......+.+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~l--------------asgs~D~~i~lwd~~~~~~-~~~~~~~~~ 148 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLIL--------------ACGSSDGAISLLTYTGEGQ-WEVKKINNA 148 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCE--------------EEECSSSCEEEEEECSSSC-EEECCBTTS
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEE--------------EEEcCCCCEEEEecCCCCC-cceeeeecc
Confidence 999998874 44455667777888888776433222 2344555666665432110 011344568
Q ss_pred cCCCeeEEEEcCC-----------------C-eEEEEeCCCcEEEEECCCC---eEEEEec-CCCcEEEEEEeeCCC---
Q 010037 387 HSSEVLDLSWSKN-----------------G-FLLSSSADKTVRLWQVGID---RCLRVFS-HNNYVTSVAFNPVDD--- 441 (519)
Q Consensus 387 h~~~V~~l~~sp~-----------------~-~L~sgs~Dg~V~lWdl~~~---~~~~~~~-h~~~V~~v~fsp~d~--- 441 (519)
|...|.+++|+|+ + +|++|+.|++|+|||++.. +++..+. |...|++++|+| ++
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~ 227 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIGLP 227 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSSCS
T ss_pred ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCCCC
Confidence 9999999999997 3 8999999999999999765 4555554 999999999999 64
Q ss_pred -CEEEEEeCCCeEEEEEcCCCc-----EEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 442 -NYFISGSIDGKVRIWEVRRCQ-----VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 442 -~~l~sgs~Dg~V~iwd~~~~~-----~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
.+|++|+.|++|+|||+.+.. ...+..|...|.+++|+|+|++|++++.||.|+||+..
T Consensus 228 ~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 228 TSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 899999999999999997621 12345678899999999999999999999999999976
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.9e-31 Score=263.70 Aligned_cols=248 Identities=20% Similarity=0.204 Sum_probs=184.3
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEec
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~ 313 (519)
|...+.+++|+|++.+|++|+.|++|+||+................+.+|.+.|.+++|+|++++||+|+.|++|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 56677889999999999999999999999986432111122234567899999999999999999999999999999999
Q ss_pred ccC----eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCC
Q 010037 314 IEH----ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (519)
Q Consensus 314 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (519)
... +++..+..+...+.++.|.++.. ..+.++.++.+.+|+.... ..+++..+.+|..
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~----------------~l~s~s~D~~i~iW~~~~~--~~~~~~~~~~h~~ 198 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEA----------------LLASSSYDDTVRIWKDYDD--DWECVAVLNGHEG 198 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSS----------------EEEEEETTSCEEEEEEETT--EEEEEEEECCCSS
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCC----------------EEEEEcCCCeEEEEECCCC--CeeEEEEccCCCC
Confidence 432 34555666666666776665432 2234555667777754321 1145678899999
Q ss_pred CeeEEEEcCC--C-eEEEEeCCCcEEEEECCCC--------eEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 390 EVLDLSWSKN--G-FLLSSSADKTVRLWQVGID--------RCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 390 ~V~~l~~sp~--~-~L~sgs~Dg~V~lWdl~~~--------~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
.|.+++|+|+ + +|++++.|++|+|||+..+ .+...+. |...|++++|+| + .+|++++.||.|+||
T Consensus 199 ~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~-~~l~s~~~dg~v~iw 276 (330)
T 2hes_X 199 TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-N-GLIASVGADGVLAVY 276 (330)
T ss_dssp CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-T-SCEEEEETTSCEEEE
T ss_pred cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-C-CEEEEEeCCCEEEEE
Confidence 9999999998 5 8999999999999998764 4445553 889999999997 4 489999999999999
Q ss_pred EcCCCc--EE-e-eccCCC-ceEEEEEee--CCCEEEEEecCCeEEEEECCC
Q 010037 457 EVRRCQ--VV-D-YTDIRE-IVSAVCYCP--DGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 457 d~~~~~--~~-~-~~~~~~-~V~~v~~sp--dg~~l~sgs~dg~v~iwdl~~ 501 (519)
|..+++ .. . ...|.. .|++++|+| ++++|++|+.||.|+|||+.+
T Consensus 277 ~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 277 EEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 998874 33 2 346766 899999999 789999999999999999864
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=7.1e-31 Score=264.22 Aligned_cols=251 Identities=19% Similarity=0.219 Sum_probs=196.4
Q ss_pred CeeeEee-cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 230 AMARIID-RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 230 ~~~~~~~-~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
.+..|.+ .+.+++|+|+|++||+|+.|++|+||++........ .....+|...|.+++|+|++++||+|+.|++|
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~----~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICK----SVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEE----EEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceee----eeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 3445555 667899999999999999999999999875432111 11235899999999999999999999999999
Q ss_pred EEEecccCe--eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 309 RVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 309 ~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
+||++..+. ++..+..+...+.++.|.++.. ..+.++.++.+.+|+...... ...+..+.+
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~----------------~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~ 148 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN----------------LLATCSRDKSVWVWEVDEEDE-YECVSVLNS 148 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEEECTTSC-EEEEEEECC
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCC----------------EEEEEECCCeEEEEECCCCCC-eEEEEEecC
Confidence 999997764 4556666777777777766432 123445566677776543211 123566789
Q ss_pred cCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeE--EEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC-
Q 010037 387 HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRC--LRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC- 461 (519)
Q Consensus 387 h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~--~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~- 461 (519)
|...|.+++|+|++ +|++++.|++|++||+.++.. ...+. |...|++++|+| ++++|++|+.|++|+|||....
T Consensus 149 h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp CCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTT
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCC
Confidence 99999999999999 999999999999999988764 34454 999999999999 9999999999999999997432
Q ss_pred --------------cEE-eec-cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCC
Q 010037 462 --------------QVV-DYT-DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 462 --------------~~~-~~~-~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~ 502 (519)
+++ ... .|...|++++|+|++..|++++.|+.|++|+...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred CCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 112 222 37889999999999999999999999999998754
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.7e-30 Score=259.85 Aligned_cols=250 Identities=22% Similarity=0.246 Sum_probs=192.2
Q ss_pred CCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCcccccccccccccee-ec-CCCCEEEEEEccCCCEEEEEeCCC
Q 010037 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEF-LA-HEGSILTMKFSLDGQYLASGGEDG 306 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l-~~-H~~~I~~l~fspdg~~LaSgs~Dg 306 (519)
..+.+|.+.+.+++|+|+ +||+|+.|++|+||++...... ....+ .+ |.+.|.+++|+|++++||+|+.|+
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFT-----LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCE-----EEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeE-----EEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 346677888889999988 9999999999999998753211 11223 34 999999999999999999999999
Q ss_pred cEEEEecccC-------eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccc
Q 010037 307 TVRVWKVIEH-------ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (519)
Q Consensus 307 ~I~iWd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 379 (519)
+|+||++... +....+..+...+.++.|.++.. ..+.++.++.+.+|+........+
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~----------------~las~s~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY----------------YLATCSRDKSVWIWETDESGEEYE 144 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC----------------EEEEEETTSCEEEEECCTTCCCCE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC----------------EEEEEeCCCEEEEEeccCCCCCeE
Confidence 9999998532 33444555555566666655421 234556677788887643222234
Q ss_pred ceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCC--eEEEEec-CCCcEEEEEEeeCC--CCEEEEEeCCCeE
Q 010037 380 PLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGID--RCLRVFS-HNNYVTSVAFNPVD--DNYFISGSIDGKV 453 (519)
Q Consensus 380 ~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~--~~~~~~~-h~~~V~~v~fsp~d--~~~l~sgs~Dg~V 453 (519)
.+..+.+|...|.+++|+|++ +|++++.|++|++||+.++ +++..+. |...|++++|+| + +.+|++|+.|++|
T Consensus 145 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDSTV 223 (330)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSCE
T ss_pred EEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCeE
Confidence 567788999999999999999 9999999999999999876 5677775 999999999999 6 6789999999999
Q ss_pred EEEEcCCC--------cEE-eecc-CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 454 RIWEVRRC--------QVV-DYTD-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 454 ~iwd~~~~--------~~~-~~~~-~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
+|||++.+ ... .+.. |...|++++|++++ +|++++.||.|+|||+.+++
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred EEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 99999764 222 2333 88899999999766 79999999999999998763
No 27
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.98 E-value=2.8e-30 Score=255.11 Aligned_cols=244 Identities=19% Similarity=0.270 Sum_probs=196.6
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+..+...+.+++|+|++++|++|+.|++|+||++..... ...+.+|.+.|++++|+|++++|++|+.||+|++
T Consensus 51 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~-------~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~l 123 (304)
T 2ynn_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-------VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (304)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE-------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred eeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE-------EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEE
Confidence 344556677899999999999999999999999875442 3457899999999999999999999999999999
Q ss_pred EecccC-eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCC
Q 010037 311 WKVIEH-ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (519)
Q Consensus 311 Wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (519)
||+.++ .....+..+...+.++.|.+..... .+.++.++.+.+|+..... .......+|..
T Consensus 124 Wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~---------------l~sgs~D~~v~iwd~~~~~---~~~~~~~~~~~ 185 (304)
T 2ynn_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPST---------------FASGCLDRTVKVWSLGQST---PNFTLTTGQER 185 (304)
T ss_dssp EEGGGTTEEEEEECCCCSCEEEEEECTTCTTE---------------EEEEETTSEEEEEETTCSS---CSEEEECCCTT
T ss_pred EECCCCcchhhhhcccCCcEEEEEECCCCCCE---------------EEEEeCCCeEEEEECCCCC---ccceeccCCcC
Confidence 999887 4445566677677777776543322 2345667778888764321 11223345778
Q ss_pred CeeEEEEcC--CC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-
Q 010037 390 EVLDLSWSK--NG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV- 464 (519)
Q Consensus 390 ~V~~l~~sp--~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~- 464 (519)
.+..++|+| ++ +|++|+.|++|++||+++++++..+. |...|++++|+| ++.+|++|+.||+|+|||+.+++++
T Consensus 186 ~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp CEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred cEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceee
Confidence 899999987 55 99999999999999999999999886 999999999999 8999999999999999999999887
Q ss_pred eeccCCCceEEEEEeeCCC--EEEEEecCCeEEEEECCC
Q 010037 465 DYTDIREIVSAVCYCPDGK--GGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 465 ~~~~~~~~V~~v~~spdg~--~l~sgs~dg~v~iwdl~~ 501 (519)
.+..+...+.+++|+|++. ++++|+. ..+.+|++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~asg~~-~g~~~~~~~~ 302 (304)
T 2ynn_A 265 TLNVGLERSWCIATHPTGRKNYIASGFD-NGFTVLSLGN 302 (304)
T ss_dssp EECCSSSSEEEEEECTTCGGGCEEEEET-TEEEEEECC-
T ss_pred eccCCCccEEEEEECCCCCceEEEEecC-CceEEEEecc
Confidence 4667788999999999885 4666664 4577888754
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-30 Score=257.78 Aligned_cols=266 Identities=12% Similarity=0.133 Sum_probs=215.6
Q ss_pred ccCCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCC
Q 010037 227 KLGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG 306 (519)
Q Consensus 227 ~~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg 306 (519)
+...+.+|...+.+++|+|++++|++|+.||.|+||++.... ....+.+|...|.+++|+|++++|++++.||
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE-------RLGTLDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch-------hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 334577888899999999999999999999999999987543 2345788999999999999999999999999
Q ss_pred cEEEEecccCeeeceeeccCCCCceEEEeecCCCCeE-------------EeeccCCc----------------------
Q 010037 307 TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLI-------------PIDVDKEK---------------------- 351 (519)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~---------------------- 351 (519)
.|++||+.+++....+. +...+.++.+.+.....+. .+......
T Consensus 97 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred eEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 99999999998888777 4555666666554332111 11111100
Q ss_pred --e-------eeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeE
Q 010037 352 --I-------DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRC 421 (519)
Q Consensus 352 --~-------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~ 421 (519)
+ .....+.++.++.+.+|+.... ...+..+..|...|.+++|+|++ +|++++.|+.|++||+.++++
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNN---YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTT---TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCC---cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 0 0012233445566666665431 34577788899999999999999 999999999999999999999
Q ss_pred EEEecCCCcEEEEEEeeCCCCEEEEEeCCC--------------eEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEE
Q 010037 422 LRVFSHNNYVTSVAFNPVDDNYFISGSIDG--------------KVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGI 486 (519)
Q Consensus 422 ~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg--------------~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~ 486 (519)
+..+.+...+.+++|+| ++.++++++.++ .|++||+.+++.+ .+..|...|++++|+|+|++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 331 (369)
T 3zwl_B 253 LKKYETDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYA 331 (369)
T ss_dssp EEEEECSSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred eeeecCCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEE
Confidence 99999999999999999 999999999988 8999999998877 5778999999999999999999
Q ss_pred EEecCCeEEEEECCCCee
Q 010037 487 VGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 487 sgs~dg~v~iwdl~~~~l 504 (519)
+++.||.|++|++.++.+
T Consensus 332 s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 332 SGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEETTSEEEEEEECHHHH
T ss_pred EEcCCCeEEEEECccccc
Confidence 999999999999987543
No 29
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=7e-30 Score=261.66 Aligned_cols=241 Identities=22% Similarity=0.330 Sum_probs=189.3
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
.+.+++|+|++++|++|+.|+.|+||++.... ....+.+|...|.+++|+|++++|++|+.|++|++||+.++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRK-------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 36678999999999999999999999987543 22457899999999999999999999999999999999999
Q ss_pred eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc---cceeEeeccCCCeeE
Q 010037 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE---KPLHEFQGHSSEVLD 393 (519)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~---~~~~~~~~h~~~V~~ 393 (519)
++...+... ..+.++.+.+.... ..+.++.++.+.+|+........ .......+|...|.+
T Consensus 198 ~~~~~~~~~-~~v~~~~~~~~~~~---------------~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 198 QCSLTLSIE-DGVTTVAVSPGDGK---------------YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp EEEEEEECS-SCEEEEEECSTTCC---------------EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred eeEEEEEcC-CCcEEEEEECCCCC---------------EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE
Confidence 877666532 23344444432222 22344556677777765432211 111223679999999
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCC------------eEEEEe-cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcC
Q 010037 394 LSWSKNG-FLLSSSADKTVRLWQVGID------------RCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (519)
Q Consensus 394 l~~sp~~-~L~sgs~Dg~V~lWdl~~~------------~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~ 459 (519)
++|+|++ +|++++.|++|++||+++. .+...+ .|...|++++|+| ++.+|++|+.|+.|++||+.
T Consensus 262 v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 262 VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETT
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECC
Confidence 9999999 9999999999999999763 233344 4999999999999 89999999999999999999
Q ss_pred CCcEE-eeccCCCceEEEEEee------CCCEEEEEecCCeEEEEECCC
Q 010037 460 RCQVV-DYTDIREIVSAVCYCP------DGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 460 ~~~~~-~~~~~~~~V~~v~~sp------dg~~l~sgs~dg~v~iwdl~~ 501 (519)
+++.+ .+.+|...|.+++|+| ++++|++|+.||.|+||++..
T Consensus 341 ~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 341 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 98877 5778999999999986 688999999999999999854
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=4e-29 Score=247.94 Aligned_cols=247 Identities=16% Similarity=0.179 Sum_probs=205.8
Q ss_pred eEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceee--cCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL--AHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 233 ~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~--~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
.|...+.+++|+|++++|++++ ||.|++|++...... .....+. +|...|.+++|+|++++|++++.||.|++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK----SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC----SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce----eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 4567788899999999999998 999999999864421 1112233 79999999999999999999999999999
Q ss_pred EecccCe--eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC
Q 010037 311 WKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (519)
Q Consensus 311 Wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (519)
||+.+++ ....+..+...+.++.+.+... ..+.++.++.+.+|+... .+.+..+.+|.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------~l~~~~~dg~v~~~d~~~----~~~~~~~~~~~ 183 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSK----------------VCFSCCSDGNIAVWDLHN----QTLVRQFQGHT 183 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTT----TEEEEEECCCS
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCC----------------EEEEEeCCCcEEEEeCCC----Cceeeeeeccc
Confidence 9998877 4444555555555555554321 112334456677777654 34567788899
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeec
Q 010037 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT 467 (519)
Q Consensus 389 ~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~ 467 (519)
..|.+++|+|++ +|++++.|+.|++||+++++.+..+.+...+.+++|+| ++++|++++.|+.|++||+++++.....
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEEEEC
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeEEEc
Confidence 999999999999 99999999999999999999999999999999999999 9999999999999999999999988889
Q ss_pred cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 468 ~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
.|...|++++|+|++++|++++.||.|++||+.+++..
T Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 99999999999999999999999999999999987755
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=3e-29 Score=256.96 Aligned_cols=249 Identities=21% Similarity=0.294 Sum_probs=196.6
Q ss_pred eEeecccceeecCCCCeEEeeecCCeEEEeeCCcccccccccccc------------ceeecCCCCEEEEEEccCCCEEE
Q 010037 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTG------------QEFLAHEGSILTMKFSLDGQYLA 300 (519)
Q Consensus 233 ~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~------------~~l~~H~~~I~~l~fspdg~~La 300 (519)
.|...+.+++|+|+|++||+|+ ++.++||++..+..... +... .....+...|.+++|+|+|++||
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVAR-LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEE-ECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEE-ecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 4667788899999999999986 68999999876543211 0000 00112334599999999999999
Q ss_pred EEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccc
Q 010037 301 SGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (519)
Q Consensus 301 Sgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 380 (519)
+|+.|++|+|||+.+++....+..+...+.++.|.+... ..+.++.++.+.+|+..... .
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~----------------~l~s~s~d~~v~iwd~~~~~----~ 199 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD----------------KLVSGSGDRTVRIWDLRTGQ----C 199 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSEEEEEETTTTE----E
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC----------------EEEEecCCCcEEEEECCCCe----e
Confidence 999999999999999998888888777777777765442 12345667788888765432 2
Q ss_pred eeEeeccCCCeeEEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEe--------cCCCcEEEEEEeeCCCCEEEEEeCC
Q 010037 381 LHEFQGHSSEVLDLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVF--------SHNNYVTSVAFNPVDDNYFISGSID 450 (519)
Q Consensus 381 ~~~~~~h~~~V~~l~~sp-~~-~L~sgs~Dg~V~lWdl~~~~~~~~~--------~h~~~V~~v~fsp~d~~~l~sgs~D 450 (519)
...+ .+...+.+++|+| ++ +|++|+.|++|++||++++.++..+ .|...|++++|+| ++.+|++|+.|
T Consensus 200 ~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d 277 (393)
T 1erj_A 200 SLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLD 277 (393)
T ss_dssp EEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred EEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCC
Confidence 3333 3667899999999 67 9999999999999999999888776 3889999999999 99999999999
Q ss_pred CeEEEEEcCCCc-------------EEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 451 GKVRIWEVRRCQ-------------VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 451 g~V~iwd~~~~~-------------~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
++|++||+++.. ...+.+|...|.+++|+|++++|++|+.||.|++||+.+++.+
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 999999997632 2256789999999999999999999999999999999887654
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.6e-30 Score=257.08 Aligned_cols=252 Identities=18% Similarity=0.251 Sum_probs=202.5
Q ss_pred cCCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC--CCEEEEEeCC
Q 010037 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD--GQYLASGGED 305 (519)
Q Consensus 228 ~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd--g~~LaSgs~D 305 (519)
...+.+|...+.+++|+|++++||+|+.||.|+||++..... .....+.+|.+.|++++|+++ +++|++|+.|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-----EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-----eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 345778889999999999999999999999999999873222 223457889999999999987 9999999999
Q ss_pred CcEEEEecccCe--eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 306 GTVRVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 306 g~I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
|.|++||+.+++ ....+..+...+.++.|.+...... .+.++.++.+.+|+...... .....
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--------------l~~~~~d~~i~v~d~~~~~~--~~~~~ 142 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL--------------LLVASSDGKVSVVEFKENGT--TSPII 142 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE--------------EEEEETTSEEEEEECCTTSC--CCEEE
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCE--------------EEEecCCCcEEEEecCCCCc--eeeEE
Confidence 999999999987 5555666666677777766531211 23345566777777654321 23456
Q ss_pred eeccCCCeeEEEEcC-------------CC-eEEEEeCCCcEEEEECCCCe----EEEEec-CCCcEEEEEEeeCC---C
Q 010037 384 FQGHSSEVLDLSWSK-------------NG-FLLSSSADKTVRLWQVGIDR----CLRVFS-HNNYVTSVAFNPVD---D 441 (519)
Q Consensus 384 ~~~h~~~V~~l~~sp-------------~~-~L~sgs~Dg~V~lWdl~~~~----~~~~~~-h~~~V~~v~fsp~d---~ 441 (519)
+.+|...|.+++|+| ++ +|++++.|+.|++||++++. ++..+. |...|++++|+| + +
T Consensus 143 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~ 221 (379)
T 3jrp_A 143 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLR 221 (379)
T ss_dssp EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSS
T ss_pred ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCC
Confidence 778999999999999 56 99999999999999998764 334444 899999999999 7 8
Q ss_pred CEEEEEeCCCeEEEEEcCCCc----EE--eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 442 NYFISGSIDGKVRIWEVRRCQ----VV--DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 442 ~~l~sgs~Dg~V~iwd~~~~~----~~--~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
.+|++++.||.|+|||++++. .. ....+...|++++|+|+|++|++++.||.|++|++..
T Consensus 222 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 222 SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999999999999999999863 11 3445888999999999999999999999999999974
No 33
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.3e-29 Score=249.73 Aligned_cols=257 Identities=16% Similarity=0.187 Sum_probs=200.8
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc--CCCEEEEEeCCCcE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--DGQYLASGGEDGTV 308 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--dg~~LaSgs~Dg~I 308 (519)
+.+|.+.+.+++|+|++++|++|+.||.|+||++....... .....+.+|...|.+++|+| ++++|++|+.||.|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNW---ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCE---EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcc---eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 45678889999999999999999999999999998543221 23346789999999999999 69999999999999
Q ss_pred EEEecccC---------eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccc
Q 010037 309 RVWKVIEH---------ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (519)
Q Consensus 309 ~iWd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 379 (519)
++||+.++ +....+..+...+.++.|.+..... ..+.++.++.+.+|+.........
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------------~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL--------------KLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS--------------EEEEEETTCEEEEEECSSTTCTTC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc--------------EEEEecCCCcEEEecCCChHHhcc
Confidence 99999887 4455555566666666666552121 123345566777777654332211
Q ss_pred c---------eeEeeccCCCeeEEEEcCC---C-eEEEEeCCCcEEEEECCCCeE--EEEec-CCCcEEEEEEeeCCC--
Q 010037 380 P---------LHEFQGHSSEVLDLSWSKN---G-FLLSSSADKTVRLWQVGIDRC--LRVFS-HNNYVTSVAFNPVDD-- 441 (519)
Q Consensus 380 ~---------~~~~~~h~~~V~~l~~sp~---~-~L~sgs~Dg~V~lWdl~~~~~--~~~~~-h~~~V~~v~fsp~d~-- 441 (519)
. .....+|...+.+++|+|+ + .|++++.|+.+.+|+...++. +..+. |...|++++|+| ++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~ 228 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGR 228 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSC
T ss_pred ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCC
Confidence 1 0112368889999999997 5 999999999999998888765 44444 899999999999 76
Q ss_pred --CEEEEEeCCCeEEEEEcCCC----------------------------------------------cEE-eeccCCCc
Q 010037 442 --NYFISGSIDGKVRIWEVRRC----------------------------------------------QVV-DYTDIREI 472 (519)
Q Consensus 442 --~~l~sgs~Dg~V~iwd~~~~----------------------------------------------~~~-~~~~~~~~ 472 (519)
++|++|+.||.|++||++++ +.+ .+..|...
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE 308 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC
T ss_pred cceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc
Confidence 89999999999999999874 222 46678899
Q ss_pred eEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
|++++|+|+|++|++|+.||.|+||++.+++.+
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 999999999999999999999999999987544
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2.3e-29 Score=276.90 Aligned_cols=260 Identities=20% Similarity=0.302 Sum_probs=213.2
Q ss_pred cccCCeeeEeecccceeecCCC-CeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeC
Q 010037 226 KKLGAMARIIDRHGSATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (519)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~sp~g-~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~ 304 (519)
...+.+.+|.+.|.+++|+|++ ++|++|+.|++|+||++....... ......+.+|...|.+++|+|++++|++|+.
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~--~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~ 450 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY--GVAQRRLTGHSHFVEDVVLSSDGQFALSGSW 450 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS--CEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc--ccccceecCCCCcEEEEEECCCCCEEEEEeC
Confidence 3345678899999999999875 789999999999999987543221 1223467899999999999999999999999
Q ss_pred CCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe
Q 010037 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (519)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 384 (519)
||+|+|||+.++.....+..|...+.++.|.+.... .+.++.++.+.+|+...... .......
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~----------------l~s~s~D~~i~iwd~~~~~~-~~~~~~~ 513 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ----------------IVSASRDRTIKLWNTLGECK-YTISEGG 513 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC----------------EEEEETTSCEEEECTTSCEE-EEECSST
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCE----------------EEEEeCCCEEEEEECCCCcc-eeeccCC
Confidence 999999999999998888888888888877765422 23456677788887532110 0001112
Q ss_pred eccCCCeeEEEEcCCC---eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC
Q 010037 385 QGHSSEVLDLSWSKNG---FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (519)
Q Consensus 385 ~~h~~~V~~l~~sp~~---~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~ 460 (519)
.+|...|.+++|+|++ .|++++.|++|++||++++++...+. |...|++++|+| ++++|++|+.||+|+|||+++
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTT
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCC
Confidence 4689999999999986 79999999999999999999988886 999999999999 999999999999999999999
Q ss_pred CcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 461 CQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 461 ~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
++.+....+...|.+++|+|++.+|++++ ++.|+|||+.+++++.
T Consensus 593 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 593 GKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp TEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChh
Confidence 99887666778899999999998777765 6679999999987654
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.9e-29 Score=270.32 Aligned_cols=236 Identities=24% Similarity=0.358 Sum_probs=196.6
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+..+...+.+++|+|++++|++|+.+|.|++|+... .....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 340 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~--------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~ 411 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 411 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC--------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred EeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC--------CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEE
Confidence 344556667799999999999999999999999642 123457889999999999999999999999999999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
||. +++.+..+..+...+.++.+.++... .+.++.++.+.+|+. ..+.+..+.+|...
T Consensus 412 ~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~----------------l~~~~~d~~v~~w~~-----~~~~~~~~~~~~~~ 469 (577)
T 2ymu_A 412 WNR-NGQLLQTLTGHSSSVWGVAFSPDDQT----------------IASASDDKTVKLWNR-----NGQLLQTLTGHSSS 469 (577)
T ss_dssp ECT-TCCEEEEEECCSSCEEEEEECTTSSE----------------EEEEETTSEEEEEET-----TSCEEEEEECCSSC
T ss_pred EeC-CCCEEEEecCCCCCeEEEEECCCCCE----------------EEEEcCCCEEEEEEC-----CCCEEEEEcCCCCC
Confidence 995 56666777777776667766654321 123445666777753 34567888999999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeecc
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD 468 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 468 (519)
|++++|+|++ +|++++.|++|+|||. ++++++.+. |...|++|+|+| ++++|++++.||.|+|||.....+..+.+
T Consensus 470 v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~~~~~~~~~~~ 547 (577)
T 2ymu_A 470 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTG 547 (577)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECTTSCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEeCCCCEEEEEcC
Confidence 9999999999 9999999999999996 566777665 999999999999 99999999999999999975444446889
Q ss_pred CCCceEEEEEeeCCCEEEEEecCCeEEEEE
Q 010037 469 IREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 469 ~~~~V~~v~~spdg~~l~sgs~dg~v~iwd 498 (519)
|...|++++|+|||++|++++.||.|++||
T Consensus 548 h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 548 HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999999999999997
No 36
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=6.6e-29 Score=245.43 Aligned_cols=242 Identities=17% Similarity=0.307 Sum_probs=197.1
Q ss_pred eeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 010037 232 ARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVW 311 (519)
Q Consensus 232 ~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iW 311 (519)
..|...+.+++|+|++++|++|+.||.|++|++.... ....+.+|...|.+++|+|++++|++|+.||.|++|
T Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iw 134 (312)
T 4ery_A 62 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 134 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc-------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 3455667789999999999999999999999987543 234578999999999999999999999999999999
Q ss_pred ecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe-eccCCC
Q 010037 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSE 390 (519)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~ 390 (519)
|+.+++....+..+...+.++.+.++.. ..+.++.++.+.+|+.... +.+..+ ..|...
T Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~d~~i~~wd~~~~----~~~~~~~~~~~~~ 194 (312)
T 4ery_A 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGS----------------LIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPP 194 (312)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTTC----CEEEEECCSSCCC
T ss_pred ECCCCEEEEEecCCCCcEEEEEEcCCCC----------------EEEEEeCCCcEEEEECCCC----ceeeEEeccCCCc
Confidence 9999988888877776666666655432 1234455667777776542 223333 456778
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcE--EEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-e
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYV--TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-D 465 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V--~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~ 465 (519)
+.+++|+|++ +|++++.|+.|++||+.+++++..+. |...+ ....+++.++.+|++|+.||.|++||+.+++++ .
T Consensus 195 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 195 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhh
Confidence 9999999999 99999999999999999999998886 54433 334555448899999999999999999999887 5
Q ss_pred eccCCCceEEEEEeeCCCEEEEEe--cCCeEEEEECC
Q 010037 466 YTDIREIVSAVCYCPDGKGGIVGT--MTGNCRFYDIK 500 (519)
Q Consensus 466 ~~~~~~~V~~v~~spdg~~l~sgs--~dg~v~iwdl~ 500 (519)
+..|...|.+++|+|++++|++++ .||.|++|+..
T Consensus 275 ~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 275 LQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 778999999999999999999987 69999999863
No 37
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=4.3e-30 Score=266.73 Aligned_cols=246 Identities=16% Similarity=0.192 Sum_probs=182.2
Q ss_pred eeeEeecccceeecC-CCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc-CCCEEEEEeCCCcE
Q 010037 231 MARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTV 308 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp-~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~LaSgs~Dg~I 308 (519)
...+..+|.+++|+| ++.+||+|+.||.|+|||+...... ....+.+|.+.|++|+|+| ++++|+||+.||+|
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-----~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-----TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-----EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-----eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 455667789999999 5678999999999999998754422 1123568999999999998 78999999999999
Q ss_pred EEEecccCeeeceeeccCC--CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 309 RVWKVIEHERLDGFDVQDT--DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
+|||+.++........+.. ...++.+.++.. ..+.++.++.+.+|+.. .+.+..+.+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~l~~g~~dg~i~~wd~~-----~~~~~~~~~ 248 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSR----------------MVVTGDNVGNVILLNMD-----GKELWNLRM 248 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTT----------------EEEEECSSSBEEEEESS-----SCBCCCSBC
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCC----------------EEEEEeCCCcEeeeccC-----cceeEEEec
Confidence 9999977654332222222 223344433221 22345667777777654 355677889
Q ss_pred cCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEe----cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC
Q 010037 387 HSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVF----SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (519)
Q Consensus 387 h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~----~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~ 460 (519)
|...|.+++|+|++ +|++++.|++|+|||+++.+....+ .|...|++++|+| ++.+|++|+.||+|+|||+.+
T Consensus 249 h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 249 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSS
T ss_pred ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCC
Confidence 99999999999987 7889999999999999887654433 4899999999999 999999999999999999875
Q ss_pred CcEEe--------------------------------------------------------------eccCCCceEEE-E
Q 010037 461 CQVVD--------------------------------------------------------------YTDIREIVSAV-C 477 (519)
Q Consensus 461 ~~~~~--------------------------------------------------------------~~~~~~~V~~v-~ 477 (519)
+.... ...|...|.++ +
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~ 407 (435)
T 4e54_B 328 WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNE 407 (435)
T ss_dssp SSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEE
T ss_pred CccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEE
Confidence 32110 01233445555 6
Q ss_pred EeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 478 YCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 478 ~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
|+|+|++|++|+ |+.|+||++++++.
T Consensus 408 fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 408 FNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp ECTTSSCEEEEC-SSEEEECCCC----
T ss_pred ECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 899999888876 78899999987764
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.3e-28 Score=263.85 Aligned_cols=239 Identities=24% Similarity=0.364 Sum_probs=198.9
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+.+|...+.+++|+|++.++++++.||.|++|+..... ...+.+|...|.+++|+|++++|++|+.||.|++
T Consensus 299 ~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~--------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~ 370 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH--------LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 370 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE--------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe--------eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 44556677789999999999999999999999976432 2356789999999999999999999999999999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
|+. +++.+..+..+...+.++.+.++... .+.++.++.+.+|+. ..+.+..+.+|...
T Consensus 371 ~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~----------------l~~~~~d~~v~~~~~-----~~~~~~~~~~~~~~ 428 (577)
T 2ymu_A 371 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQT----------------IASASDDKTVKLWNR-----NGQLLQTLTGHSSS 428 (577)
T ss_dssp EET-TCCEEEEEECCSSCEEEEEECTTSSC----------------EEEEETTSEEEEECT-----TCCEEEEEECCSSC
T ss_pred EcC-CCCEEEEecCCCCCeEEEEECCCCCE----------------EEEEeCCCEEEEEeC-----CCCEEEEecCCCCC
Confidence 995 56667777777777777777654421 123445666777763 34567888999999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeecc
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD 468 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 468 (519)
|++++|+|++ +|++++.|++|++||+.. +.+..+ .|...|++++|+| ++.+|++++.|++|+|||.....+..+..
T Consensus 429 v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~~~~~~~~~~~ 506 (577)
T 2ymu_A 429 VWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTG 506 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEEEECCSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Confidence 9999999999 999999999999999754 445554 5999999999999 99999999999999999975444457888
Q ss_pred CCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 469 IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 469 ~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
|...|++++|+|||++|++++.||.|+|||+.+
T Consensus 507 h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 507 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 999999999999999999999999999999754
No 39
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.6e-28 Score=251.00 Aligned_cols=256 Identities=18% Similarity=0.278 Sum_probs=197.2
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeee
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL 319 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~ 319 (519)
.++|+++ ++||+|. |++|+|||...+.... ...+.+|...|++|+|+|+|++||+|+.||.|+|||+.+++.+
T Consensus 110 ~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~-----~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 110 LVDWSSG-NVLAVAL-DNSVYLWSASSGDILQ-----LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CEEECTT-SEEEEEE-TTEEEEEETTTCCEEE-----EEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEECCC-CEEEEEe-CCEEEEEECCCCCEEE-----EEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 4889976 5777775 9999999988654321 1124578889999999999999999999999999999999998
Q ss_pred ceeeccCCCCceEEEeec------CCCCeEEeeccCCce------------e-------eeeeeccCCCeeEEEeCCccc
Q 010037 320 DGFDVQDTDPSCLYFTIN------HLSQLIPIDVDKEKI------------D-------KTKSLRKSSDLTCVVLPPKVF 374 (519)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~------------~-------~~~~~~~s~~~~~~~~~~~~~ 374 (519)
..+..+...+.++.+... ....+..+....... . ......++.++.+.+|+....
T Consensus 183 ~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 183 RNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 888877766665544321 011111111111000 0 011234455667777776655
Q ss_pred cccccceeEeeccCCCeeEEEEcCCC--eEEE--EeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe--
Q 010037 375 RLLEKPLHEFQGHSSEVLDLSWSKNG--FLLS--SSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS-- 448 (519)
Q Consensus 375 ~~~~~~~~~~~~h~~~V~~l~~sp~~--~L~s--gs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs-- 448 (519)
......+.....|...|.+++|+|.+ .+++ |+.|++|++||+.+++++..+.+...+.++.|+| +++.+++++
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~-~~~~lv~~sg~ 341 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSP-HYKELISGHGF 341 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEET-TTTEEEEEECT
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecC-CCCeEEEEEec
Confidence 55555677888999999999999987 5555 4589999999999999999999888999999999 888887765
Q ss_pred CCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 449 IDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 449 ~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
.|+.|+|||+.+++++ .+.+|...|++++|+|||++|++|+.||+|+|||+.+..
T Consensus 342 ~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 342 AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 7899999999999887 578899999999999999999999999999999997643
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=5.1e-29 Score=274.10 Aligned_cols=274 Identities=18% Similarity=0.265 Sum_probs=211.2
Q ss_pred CcccccccccCCCCCCccccccCCccccccccchhhhhhhhccccccccCCeeeEeecccceeecCCCCeEEeeecCCeE
Q 010037 180 SQSVSFDEFLGTPGSSSSFVQPLPSRQDEESRDLVDAKRKVKRGWLKKLGAMARIIDRHGSATLKPGDHELTLGQRMRRV 259 (519)
Q Consensus 180 ~~~l~~~~f~~~~~~s~~~v~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I 259 (519)
++.|.....++++. +|.+..... .+......+.+|...+.+++|+|++++|++|+.||+|
T Consensus 395 ~~~l~s~s~D~~i~-----~W~~~~~~~---------------~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 395 ADIIVSASRDKSII-----LWKLTKDDK---------------AYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp CSEEEEEETTSEEE-----EEECCCSTT---------------CSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCEEEEEeCCCcEE-----EEEccCCCc---------------ccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 35677777777777 787643211 0111123456777888899999999999999999999
Q ss_pred EEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeecee---eccCCCCceEEEee
Q 010037 260 RVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGF---DVQDTDPSCLYFTI 336 (519)
Q Consensus 260 ~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~---~~~~~~~~~~~~~~ 336 (519)
+||++.... ..+.+.+|.+.|.+++|+|++++|+||+.|++|+|||+......... ..+...+.++.+.+
T Consensus 455 ~vwd~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 455 RLWDLAAGV-------STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EEEETTTTE-------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECS
T ss_pred EEEECCCCc-------ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeC
Confidence 999987543 23467899999999999999999999999999999998654332221 12333455555555
Q ss_pred cCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEE
Q 010037 337 NHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQ 415 (519)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWd 415 (519)
+.... ..+.++.++.+.+|+... .+....+.+|...|++++|+|++ +|++|+.|++|+|||
T Consensus 528 ~~~~~--------------~l~s~s~d~~v~vwd~~~----~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 528 NTLQP--------------TIVSASWDKTVKVWNLSN----CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD 589 (694)
T ss_dssp CSSSC--------------EEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEE
T ss_pred CCCcc--------------eEEEEeCCCeEEEEECCC----CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 43221 234556677888887754 34467788999999999999999 999999999999999
Q ss_pred CCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeecc--------------------CCCceEE
Q 010037 416 VGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD--------------------IREIVSA 475 (519)
Q Consensus 416 l~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~--------------------~~~~V~~ 475 (519)
+.+++++..+.+...|++++|+| ++.+|++++ ++.|+|||+++++++.... +...+++
T Consensus 590 ~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (694)
T 3dm0_A 590 LAEGKKLYSLEANSVIHALCFSP-NRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTS 667 (694)
T ss_dssp TTTTEEEECCBCSSCEEEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEE
T ss_pred CCCCceEEEecCCCcEEEEEEcC-CCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeee
Confidence 99999999888888999999999 888877766 5679999999987763211 1123789
Q ss_pred EEEeeCCCEEEEEecCCeEEEEECC
Q 010037 476 VCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 476 v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
++|+|||++|++|+.||.|+||++.
T Consensus 668 l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 668 LNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEcCCCCEEEEEcCCCeEEEEecc
Confidence 9999999999999999999999985
No 41
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=6.4e-28 Score=237.71 Aligned_cols=256 Identities=18% Similarity=0.283 Sum_probs=196.3
Q ss_pred cceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCee
Q 010037 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (519)
Q Consensus 239 ~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~ 318 (519)
++++|++++ +||+| .|++|+|||+..+.... ...+.+|...|++++|+|++++||+|+.||+|++|++.+++.
T Consensus 29 ~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~-----~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQ-----LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp BCEEECTTS-EEEEE-ETTEEEEEETTTCCEEE-----EEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEECCCC-EEEEE-eCCEEEEEECCCCCEEE-----EEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 458999986 77776 59999999988654321 112457888999999999999999999999999999999999
Q ss_pred eceeeccCCCCceEEEeec------CCCCeEEeeccCC------------ce-------eeeeeeccCCCeeEEEeCCcc
Q 010037 319 LDGFDVQDTDPSCLYFTIN------HLSQLIPIDVDKE------------KI-------DKTKSLRKSSDLTCVVLPPKV 373 (519)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~------------~~-------~~~~~~~~s~~~~~~~~~~~~ 373 (519)
+..+..+.....+...... ....+........ .. .....+.++.++.+.+|+...
T Consensus 102 ~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 8888776655443322111 0000111110000 00 011234566777888888776
Q ss_pred ccccccceeEeeccCCCeeEEEEcCCC--e--EEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe-
Q 010037 374 FRLLEKPLHEFQGHSSEVLDLSWSKNG--F--LLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS- 448 (519)
Q Consensus 374 ~~~~~~~~~~~~~h~~~V~~l~~sp~~--~--L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs- 448 (519)
.............|.+.|.+++++|.+ . +++++.+++|++||...........+...+..+.|+| ++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~sg 260 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSP-HYKELISGHG 260 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEET-TTTEEEEEEC
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecc-cccceEEEEE
Confidence 665556667778899999999999977 3 3466788999999999999999888999999999999 777777654
Q ss_pred -CCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCC
Q 010037 449 -IDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 449 -~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~ 502 (519)
.|+.|+|||+++++++ .+.+|.+.|++++|+|||++|++|+.||+|+|||+.+.
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 7999999999999887 57889999999999999999999999999999999653
No 42
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.5e-29 Score=251.19 Aligned_cols=213 Identities=9% Similarity=0.018 Sum_probs=155.0
Q ss_pred CCCCEEEEEEccCCCEEEEE--eCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeecc
Q 010037 283 HEGSILTMKFSLDGQYLASG--GEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRK 360 (519)
Q Consensus 283 H~~~I~~l~fspdg~~LaSg--s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (519)
+...+.+++|||||++||+| +.|++|+|||+.+++.+..+. +...+..+.|.++... ++ .+
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~--l~--------------s~ 194 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKV--VA--------------YI 194 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSE--EE--------------EE
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCce--EE--------------ec
Confidence 34558899999999998755 478999999999999888776 4456777887765432 11 11
Q ss_pred CCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCC----cEEEEECCCCeEE----EEe-cCCCc
Q 010037 361 SSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADK----TVRLWQVGIDRCL----RVF-SHNNY 430 (519)
Q Consensus 361 s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg----~V~lWdl~~~~~~----~~~-~h~~~ 430 (519)
+.+..++++...... .......+|...|.+++|+|++ ++++++.|+ ++++|++...... ..+ .|...
T Consensus 195 s~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 271 (365)
T 4h5i_A 195 TGSSLEVISTVTGSC---IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG 271 (365)
T ss_dssp CSSCEEEEETTTCCE---EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC
T ss_pred cceeEEEEEeccCcc---eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC
Confidence 222223333221110 0112345688999999999999 899998887 6889998876543 222 38899
Q ss_pred EEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe--eccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeecc
Q 010037 431 VTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD--YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 431 V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~--~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~~ 508 (519)
|++++|+| ++++||+|+.|++|+|||+++++++. ..+|...|++++|+|||++||+|+.|++|+|||+..+......
T Consensus 272 V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~~~~s 350 (365)
T 4h5i_A 272 ITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNYANYTS 350 (365)
T ss_dssp EEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTTTC---
T ss_pred eEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCcCccC
Confidence 99999999 99999999999999999999999884 3679999999999999999999999999999999765433333
Q ss_pred ccceeEEe
Q 010037 509 TTAYLFAL 516 (519)
Q Consensus 509 ~~~~~~~l 516 (519)
..+.+..|
T Consensus 351 ~~~~l~kl 358 (365)
T 4h5i_A 351 MKQKISKL 358 (365)
T ss_dssp --------
T ss_pred ccccceee
Confidence 33334433
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-28 Score=251.22 Aligned_cols=240 Identities=21% Similarity=0.321 Sum_probs=200.6
Q ss_pred eEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEe
Q 010037 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (519)
Q Consensus 233 ~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd 312 (519)
.|...+.+++|+|++++|++|+.+|.|++|+... .....+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG--------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETTS--------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC--------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 3566888899999999999999999999999331 12235678999999999999999999999999999999
Q ss_pred cccCeeeceeeccCCC---------------CceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccc
Q 010037 313 VIEHERLDGFDVQDTD---------------PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL 377 (519)
Q Consensus 313 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 377 (519)
+.+++....+..+... +.++.+.+.. ..+.++.++.+.+|+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~g~i~~~d~~~---- 236 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-----------------KFVIPGPKGAIFVYQITE---- 236 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETT-----------------EEEEECGGGCEEEEETTC----
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-----------------EEEEEcCCCeEEEEEcCC----
Confidence 9999988877666554 3344443321 123445566777777654
Q ss_pred ccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEE
Q 010037 378 EKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (519)
Q Consensus 378 ~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~i 455 (519)
.+++..+.+|...|.+++|+|++ +|++++.|+.|++||+.+++++..+. |...|++++|+| ++ +|++++.|+.|++
T Consensus 237 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 237 KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVG-DD-KVISCSMDGSVRL 314 (425)
T ss_dssp SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEET-TT-EEEEEETTSEEEE
T ss_pred CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECC-CC-EEEEEeCCCcEEE
Confidence 35567788999999999999999 99999999999999999998888886 999999999999 77 9999999999999
Q ss_pred EEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 456 WEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 456 wd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
||+++++.+ .+..|...|++++|+|++++|++++.||.|++||+.+++
T Consensus 315 ~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 315 WSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 999998877 466788999999999999999999999999999998765
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-28 Score=239.13 Aligned_cols=258 Identities=20% Similarity=0.243 Sum_probs=200.7
Q ss_pred CCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
..+.+|.+.+.+++| |++.+|++|+.||.|+||++.... ....+..|...|.+++|+|++++|++|+.||.|
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-------LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-------EEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-------EEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 446677888889999 999999999999999999986433 234567899999999999999999999999999
Q ss_pred EEEecccC---eeeceeeccCCCCceEEEeecCCCCeEEeeccC------------------Ccee--------eeeeec
Q 010037 309 RVWKVIEH---ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDK------------------EKID--------KTKSLR 359 (519)
Q Consensus 309 ~iWd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--------~~~~~~ 359 (519)
++|++... +....+..+...+.++.+. ...++....+. ..+. ....+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 99998664 4455555566666555552 11122111110 0000 011223
Q ss_pred cCCCeeEEEeCCccccccccceeEeec-cCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEe
Q 010037 360 KSSDLTCVVLPPKVFRLLEKPLHEFQG-HSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFN 437 (519)
Q Consensus 360 ~s~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fs 437 (519)
++.++.+.+|+ ..+....+.. |...|.+++|+|++.|++++.|+.|++||+++++++..+. |...|++++|+
T Consensus 161 ~~~d~~i~i~d------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 234 (313)
T 3odt_A 161 ASADKTIKLWQ------NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL 234 (313)
T ss_dssp EETTSCEEEEE------TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EECCCCEEEEe------cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe
Confidence 34455555554 2345566666 9999999999999999999999999999999999998886 99999999999
Q ss_pred eCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 438 PVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 438 p~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
| ++ .|++++.||.|++||+++++.+ .+..|...|++++|+|+|+ +++++.||.|++||+.++++..
T Consensus 235 ~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 235 P-NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp T-TS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred c-CC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 9 77 5889999999999999999877 4677888999999999998 6679999999999999877654
No 45
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-29 Score=261.46 Aligned_cols=265 Identities=10% Similarity=0.145 Sum_probs=196.2
Q ss_pred eeEeecccceeecC-CCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 232 ARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 232 ~~~~~~~~~~~~sp-~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
.+|.+.+.+++|+| ++.+|++|+.||+|+||++....... ....... .+|.+.|.+++|+|++++|++|+.||.|++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~dg~i~v 137 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE-VYSSSLT-YDCSSTVTQITMIPNFDAFAVSSKDGQIIV 137 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-CCSCSEE-EECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-ccceeee-ccCCCCEEEEEEeCCCCEEEEEeCCCEEEE
Confidence 44567788899999 99999999999999999987522111 1111122 259999999999999999999999999999
Q ss_pred Eecc---cCeeeceeeccCCCCceEEEeec-CCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 311 WKVI---EHERLDGFDVQDTDPSCLYFTIN-HLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 311 Wd~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
||+. +++....+..+ .+..+.+.+. ....+..+.... .......+.++.++.+.+|+... .+++..+.+
T Consensus 138 wd~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~iwd~~~----~~~~~~~~~ 210 (437)
T 3gre_A 138 LKVNHYQQESEVKFLNCE--CIRKINLKNFGKNEYAVRMRAFV-NEEKSLLVALTNLSRVIIFDIRT----LERLQIIEN 210 (437)
T ss_dssp EEEEEEEETTEEEEEEEE--EEEEEEGGGGSSCCCEEEEEEEE-CSSCEEEEEEETTSEEEEEETTT----CCEEEEEEC
T ss_pred EEeccccCCceeeccccc--eeEEEEccCcccccCceEEEEEE-cCCCCEEEEEeCCCeEEEEeCCC----CeeeEEEcc
Confidence 9995 55444333322 1111111111 111111111000 00122345667788888888765 345777777
Q ss_pred --cCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--cCCCcEEEEEEeeC---CCCEEEEEeCCCeEEEEEc
Q 010037 387 --HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--SHNNYVTSVAFNPV---DDNYFISGSIDGKVRIWEV 458 (519)
Q Consensus 387 --h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~--~h~~~V~~v~fsp~---d~~~l~sgs~Dg~V~iwd~ 458 (519)
|...|++++|+|++ +|++|+.|++|++||+++++++..+ .|...|++++|+|. ++.+|++|+.||.|+|||+
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 89999999999999 9999999999999999999999987 57889999977762 5779999999999999999
Q ss_pred CCCcEEe-ecc--------------------------CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 459 RRCQVVD-YTD--------------------------IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 459 ~~~~~~~-~~~--------------------------~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
++++.+. +.. |...|++++|+ ++++|++|+.||.|++||+.+++...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 9887653 221 56678999999 88999999999999999999877543
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=3.5e-28 Score=245.08 Aligned_cols=245 Identities=14% Similarity=0.146 Sum_probs=194.4
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEec
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~ 313 (519)
|...+.+++|+|++++|++|+.++.|+||++..... .....+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW-----VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE-----EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE-----EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 567788899999999999999999999999875431 133467899999999999999999999999999999999
Q ss_pred ccCeeeceee--ccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCe
Q 010037 314 IEHERLDGFD--VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (519)
Q Consensus 314 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 391 (519)
.+++....+. .+...+.++.|.+... .+ +.++.++.+.+|+...............+|...|
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l--------------~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i 145 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEK--KF--------------AVGSGSRVISICYFEQENDWWVCKHIKKPIRSTV 145 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSS--EE--------------EEEETTSSEEEEEEETTTTEEEEEEECTTCCSCE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCC--EE--------------EEEeCCCEEEEEEecCCCcceeeeeeecccCCCe
Confidence 8887554443 3444455555554431 11 2223344555554433221111122335689999
Q ss_pred eEEEEcCCC-eEEEEeCCCcEEEEEC------------------CCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCC
Q 010037 392 LDLSWSKNG-FLLSSSADKTVRLWQV------------------GIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDG 451 (519)
Q Consensus 392 ~~l~~sp~~-~L~sgs~Dg~V~lWdl------------------~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg 451 (519)
.+++|+|++ +|++++.|+.|++||+ ..++++..+. |...|++++|+| ++++|++++.|+
T Consensus 146 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 224 (372)
T 1k8k_C 146 LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDS 224 (372)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTT
T ss_pred eEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCC
Confidence 999999999 9999999999999995 4678888885 899999999999 899999999999
Q ss_pred eEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 452 KVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 452 ~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
.|++||+++++.+ .+..|...|++++|+|++++|++| .||.|++|++.+
T Consensus 225 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 225 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999988877 567788899999999999988877 899999999988
No 47
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.3e-28 Score=249.04 Aligned_cols=260 Identities=14% Similarity=0.118 Sum_probs=206.3
Q ss_pred cCCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC----C---CEEE
Q 010037 228 LGAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD----G---QYLA 300 (519)
Q Consensus 228 ~~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd----g---~~La 300 (519)
...+.+|.+.+.+++|+| ++|++|+.||.|+||++...... ........+.+|..+|.+++|+|+ + ++|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-CGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-cCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 344567788889999999 89999999999999999865421 122344567899999999999999 9 9999
Q ss_pred EEeCCCcEEEEecccCee-----eceeecc-----CCCCceEEEe----ecCCCCeEEeeccCCceeeeeeeccCCCeeE
Q 010037 301 SGGEDGTVRVWKVIEHER-----LDGFDVQ-----DTDPSCLYFT----INHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (519)
Q Consensus 301 Sgs~Dg~I~iWd~~~~~~-----~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 366 (519)
+++.||.|++|++.+++. ...+..+ ...+.++.+. +.... ..+.++.++.+
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------------~l~~~~~dg~i 150 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH---------------RLVATDVKGTT 150 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CE---------------EEEEEETTSCE
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCce---------------EEEEEeCCCcE
Confidence 999999999999998876 6666665 3566666666 33321 02233445566
Q ss_pred EEeCCcc------cccc-ccceeEe-------eccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec----C-
Q 010037 367 VVLPPKV------FRLL-EKPLHEF-------QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS----H- 427 (519)
Q Consensus 367 ~~~~~~~------~~~~-~~~~~~~-------~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~----h- 427 (519)
.+|+... .... ..+...+ ..|...|.+++|+|+++|++++.|+.|++||+++++++..+. |
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~ 230 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMI 230 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEecccccc
Confidence 6666544 2111 1122255 448999999999998888899999999999999999998886 5
Q ss_pred --CCcEEEEEEeeCCCCEEEEEeCC---CeEEEEEcCCCcEE-eecc-------------CCCceEEEEEeeCCCEEEEE
Q 010037 428 --NNYVTSVAFNPVDDNYFISGSID---GKVRIWEVRRCQVV-DYTD-------------IREIVSAVCYCPDGKGGIVG 488 (519)
Q Consensus 428 --~~~V~~v~fsp~d~~~l~sgs~D---g~V~iwd~~~~~~~-~~~~-------------~~~~V~~v~~spdg~~l~sg 488 (519)
...|++++|+| ++.+|++++.| |.|++||+++++.+ .+.. |...|++++|+|++++|+++
T Consensus 231 ~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 231 NNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEE
Confidence 89999999999 89999999999 99999999998877 4555 88999999999999999999
Q ss_pred ecCCeEEEEECCCCeeee
Q 010037 489 TMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 489 s~dg~v~iwdl~~~~l~~ 506 (519)
+.||.|++||+.+++.+.
T Consensus 310 ~~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERIT 327 (397)
T ss_dssp ETTSEEEEEETTTTEEEE
T ss_pred eCCCeEEEEEcCCCceeE
Confidence 999999999999887654
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=1.2e-28 Score=251.20 Aligned_cols=249 Identities=14% Similarity=0.192 Sum_probs=199.1
Q ss_pred eeeEeecccceeecCC----C---CeEEeeecCCeEEEeeCCccccccccccccceeecC-----CCCEEEEEEc----c
Q 010037 231 MARIIDRHGSATLKPG----D---HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAH-----EGSILTMKFS----L 294 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~----g---~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H-----~~~I~~l~fs----p 294 (519)
+..|...+.+++|+|+ + .+|++++.||.|++|++...... .......+..| ...|.+++|+ |
T Consensus 58 ~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 135 (397)
T 1sq9_A 58 HFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET--KKVIFEKLDLLDSDMKKHSFWALKWGASNDR 135 (397)
T ss_dssp EECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT--CCEEEEEECCSCTTGGGSCEEEEEEECCC--
T ss_pred EecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccc--ccccceeecccccccCCCcEEEEEEeeccCC
Confidence 4456677788999999 9 99999999999999998754421 01113456778 5999999999 9
Q ss_pred CCCE-EEEEeCCCcEEEEeccc------Ceeec-----eee-------ccCCCCceEEEeecCCCCeEEeeccCCceeee
Q 010037 295 DGQY-LASGGEDGTVRVWKVIE------HERLD-----GFD-------VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (519)
Q Consensus 295 dg~~-LaSgs~Dg~I~iWd~~~------~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (519)
++++ |++++.||.|++||+.+ ++.+. .+. .+...+.++.+.+..
T Consensus 136 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------- 198 (397)
T 1sq9_A 136 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG----------------- 198 (397)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-----------------
T ss_pred CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-----------------
Confidence 9999 99999999999999988 65555 442 244455566555433
Q ss_pred eeeccCCCeeEEEeCCccccccccceeEeec---c---CCCeeEEEEcCCC-eEEEEeCC---CcEEEEECCCCeEEEEe
Q 010037 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG---H---SSEVLDLSWSKNG-FLLSSSAD---KTVRLWQVGIDRCLRVF 425 (519)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~---h---~~~V~~l~~sp~~-~L~sgs~D---g~V~lWdl~~~~~~~~~ 425 (519)
..+.++.++.+.+|+... .+++..+.. | ...|.+++|+|++ +|++++.| +.|++||+++++++..+
T Consensus 199 ~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 199 LIATGFNNGTVQISELST----LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEEECTTSEEEEEETTT----TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred eEEEEeCCCcEEEEECCC----CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 223445667777877654 345677788 9 9999999999999 99999999 99999999999988888
Q ss_pred c--------------CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-ec------cC---------------
Q 010037 426 S--------------HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YT------DI--------------- 469 (519)
Q Consensus 426 ~--------------h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~------~~--------------- 469 (519)
. |...|++++|+| ++++|++++.||.|+|||+++++.+. +. .|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 353 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred ccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccccccc
Confidence 5 889999999999 99999999999999999999998774 44 56
Q ss_pred CCceEEEEEeeCC----------CEEEEEecCCeEEEEECCCCe
Q 010037 470 REIVSAVCYCPDG----------KGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 470 ~~~V~~v~~spdg----------~~l~sgs~dg~v~iwdl~~~~ 503 (519)
...|++++|+|+| ++|++++.||.|++|++.+++
T Consensus 354 ~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 354 EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp SCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 8999999999999 799999999999999998764
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=1.1e-27 Score=249.79 Aligned_cols=260 Identities=18% Similarity=0.302 Sum_probs=208.8
Q ss_pred CeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEE
Q 010037 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~ 309 (519)
.+.+|.+.+.. ++.+++++|++|+.||.|++|++.... ....+.+|.+.|++++|+|++ +|++|+.||+|+
T Consensus 116 ~l~~h~~~v~~-~~~~~~~~l~sgs~dg~i~vwd~~~~~-------~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 116 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKK-------FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEECCSSSCEE-EEEEETTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred EEcCCCCCcEE-EEEECCCEEEEEcCCCcEEEEECCCCc-------EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 34555555432 455577899999999999999987544 234578999999999999988 999999999999
Q ss_pred EEecccCeeeceeeccCCCCceEEEeecCCCCeE-E---------eeccCCce---------------------------
Q 010037 310 VWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLI-P---------IDVDKEKI--------------------------- 352 (519)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~--------------------------- 352 (519)
+||+.+++....+..+...+.++.+.+......+ . +.......
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 9999999999888888888888887764332222 2 11111110
Q ss_pred ------------eeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCC
Q 010037 353 ------------DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGID 419 (519)
Q Consensus 353 ------------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~ 419 (519)
.....+.++.++.+.+|+... .+++..+.+|...|.+++|+|++ +|++|+.|++|++||++++
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQ----MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCC----CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 001234455566777776653 35577888999999999999999 9999999999999999999
Q ss_pred eEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEE
Q 010037 420 RCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 420 ~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwd 498 (519)
+++..+. |...|++++|+ +.+|++|+.||.|++||++++.......+...+..++|+|++++|++|+ ||.|++||
T Consensus 343 ~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp EEEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEE
T ss_pred cEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEE
Confidence 9999986 99999999996 4799999999999999999988776666778889999999999999998 99999999
Q ss_pred CCCCeeee
Q 010037 499 IKGMQIFD 506 (519)
Q Consensus 499 l~~~~l~~ 506 (519)
+.+++++.
T Consensus 419 ~~~g~~~~ 426 (464)
T 3v7d_B 419 LRSGKLVH 426 (464)
T ss_dssp TTTCCEEE
T ss_pred CCCCcEEe
Confidence 99998875
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=8.2e-28 Score=238.49 Aligned_cols=239 Identities=16% Similarity=0.231 Sum_probs=201.4
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEec
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV 313 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~ 313 (519)
+...+.+++|+|++++|++++.+|.|++|++...... ....+..|...|.+++|+|++++|++++.||.|++||+
T Consensus 96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR-----IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-----EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc-----eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 3456677999999999999999999999999865421 22356789999999999999999999999999999999
Q ss_pred ccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeE
Q 010037 314 IEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (519)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 393 (519)
.+++....+..+...+.++.+.++... .+.++.++.+.+|+..... .+.. ..|...+.+
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------l~~~~~dg~i~~~d~~~~~----~~~~-~~~~~~v~~ 229 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTK----------------LWTGGLDNTVRSWDLREGR----QLQQ-HDFTSQIFS 229 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSE----------------EEEEETTSEEEEEETTTTE----EEEE-EECSSCEEE
T ss_pred CCCceeeeeecccCceEEEEECCCCCE----------------EEEEecCCcEEEEECCCCc----eEee-ecCCCceEE
Confidence 999988888777777777776654321 1233456667777765432 2333 347889999
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCc
Q 010037 394 LSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREI 472 (519)
Q Consensus 394 l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~ 472 (519)
++|+|++ +|++++.|+.|++||+.+++......|...|++++|+| ++++|++++.||.|++||+.+++.+....+...
T Consensus 230 ~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 308 (337)
T 1gxr_A 230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS 308 (337)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECCCCeEEEEecCCCc
Confidence 9999999 99999999999999999998877777999999999999 999999999999999999999998877788999
Q ss_pred eEEEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 473 VSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
|++++|+|++++|++++.||.|++|++
T Consensus 309 v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 309 VLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999999999997
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.5e-29 Score=254.82 Aligned_cols=242 Identities=11% Similarity=0.075 Sum_probs=186.2
Q ss_pred eecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecc
Q 010037 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (519)
Q Consensus 235 ~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~ 314 (519)
...+.+++|+|++++|++|+.|+.|+||++..... .....+.+|.+.|.+++|+|++++|++|+.||.|++||+.
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-----KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE-----EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce-----EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 45788899999999999999999999999875421 2234577899999999999999999999999999999998
Q ss_pred cCe---eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec-cCCC
Q 010037 315 EHE---RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-HSSE 390 (519)
Q Consensus 315 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~ 390 (519)
++. ....+..+...+.++.|.++... .+.++.++.+.+|+...... ......+.+ |...
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------------l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~h~~~ 148 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDK----------------FAVGSGARVISVCYFEQEND-WWVSKHLKRPLRST 148 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSC----------------CEEEESSSCEEECCC------CCCCEEECSSCCSC
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCE----------------EEEEecCCeEEEEEECCccc-ceeeeEeecccCCC
Confidence 877 44444455555666666554321 22344566677777654321 113556677 9999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECC------------------CCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCC
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVG------------------IDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDG 451 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~------------------~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg 451 (519)
|.+++|+|++ +|++++.|++|++||+. .++++..+.|...|++++|+| ++++|++++.||
T Consensus 149 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~ 227 (377)
T 3dwl_C 149 ILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP-SGNALAYAGHDS 227 (377)
T ss_dssp EEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT-TSSCEEEEETTT
T ss_pred eEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC-CCCEEEEEeCCC
Confidence 9999999999 99999999999999985 355666668999999999999 999999999999
Q ss_pred eEEEEEcCCCcE----E-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 452 KVRIWEVRRCQV----V-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 452 ~V~iwd~~~~~~----~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
.|+|||+++++. + .+..|...|++++|+|+|++|++|+.++.+ +|+..
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999999999875 3 577899999999999999999998866665 67665
No 52
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=6.6e-28 Score=245.70 Aligned_cols=257 Identities=18% Similarity=0.216 Sum_probs=197.3
Q ss_pred eeeEeecccceeecC-CCCeEEeeecCCeEEEeeCCccccccccccc------cceeecCCCCEEEEEEcc-CCCEEEEE
Q 010037 231 MARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYT------GQEFLAHEGSILTMKFSL-DGQYLASG 302 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp-~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~------~~~l~~H~~~I~~l~fsp-dg~~LaSg 302 (519)
+..|.+.+.+++|+| ++++|++|+.||.|+||++............ .....+|...|.+++|+| ++++|+++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 455778888999999 9999999999999999999865432211000 001135999999999999 77899999
Q ss_pred eCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccccee
Q 010037 303 GEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (519)
Q Consensus 303 s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 382 (519)
+.||.|++||+.+++....+.. ......+.+.+..... ...+.++.++.+.+|+... .+.+.
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~v~~~d~~~----~~~~~ 180 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNF-EETVYSHHMSPVSTKH-------------CLVAVGTRGPKVQLCDLKS----GSCSH 180 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSSCSSC-------------CEEEEEESSSSEEEEESSS----SCCCE
T ss_pred eCCCeEEEeeCCCCccceeccC-CCceeeeEeecCCCCC-------------cEEEEEcCCCeEEEEeCCC----cceee
Confidence 9999999999999987776653 3334444444433211 1223445566677776654 34567
Q ss_pred EeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCe-EEEEe----------------cCCCcEEEEEEeeCCCCE
Q 010037 383 EFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDR-CLRVF----------------SHNNYVTSVAFNPVDDNY 443 (519)
Q Consensus 383 ~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~-~~~~~----------------~h~~~V~~v~fsp~d~~~ 443 (519)
.+.+|...|.+++|+|++ .|++++.|+.|++||++++. ++..+ .|...|++++|+| ++++
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 259 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLH 259 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSE
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCE
Confidence 888999999999999998 58999999999999998765 34433 3888999999999 9999
Q ss_pred EEEEeCCCeEEEEEcCCCcE-----------------------------------------------E-eeccCCCceEE
Q 010037 444 FISGSIDGKVRIWEVRRCQV-----------------------------------------------V-DYTDIREIVSA 475 (519)
Q Consensus 444 l~sgs~Dg~V~iwd~~~~~~-----------------------------------------------~-~~~~~~~~V~~ 475 (519)
|++++.||.|++||+++++. + .+..|...|++
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~ 339 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDC 339 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEE
Confidence 99999999999999876432 1 24568889999
Q ss_pred EEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 476 VCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 476 v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
++|+|++++|++|+.||.|++||+.+++...
T Consensus 340 ~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 340 CVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred EEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 9999999999999999999999999887653
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=6.6e-28 Score=247.36 Aligned_cols=242 Identities=16% Similarity=0.254 Sum_probs=197.9
Q ss_pred eecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecc
Q 010037 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (519)
Q Consensus 235 ~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~ 314 (519)
...+.+++|+|++.+|++|+.||.|+||++.... ....+.+|...|.+++| ++++|++|+.||.|++||+.
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT-------KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe-------EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecc
Confidence 3456779999999999999999999999987543 23456789999999999 46799999999999999998
Q ss_pred -cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeE
Q 010037 315 -EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (519)
Q Consensus 315 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 393 (519)
.......+..+...+.++.+.++.. ..+.++.++.+.+|+... .+++..+.+|...|.+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGL----------------QLASGGNDNVVQIWDARS----SIPKFTKTNHNAAVKA 264 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEETTC----SSEEEEECCCSSCCCE
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCC----------------EEEEEeCCCeEEEccCCC----CCccEEecCCcceEEE
Confidence 4555666666666666776665331 123445566777787664 4556778899999999
Q ss_pred EEEcCCC--eEEEEe--CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEE--eCCCeEEEEEcCCCcEE---
Q 010037 394 LSWSKNG--FLLSSS--ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISG--SIDGKVRIWEVRRCQVV--- 464 (519)
Q Consensus 394 l~~sp~~--~L~sgs--~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sg--s~Dg~V~iwd~~~~~~~--- 464 (519)
++|+|++ ++++++ .|+.|++||+.+++++..+.+...|++++|+| ++.+|+++ +.||.|+|||+.+++..
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence 9999977 666665 79999999999999999999999999999999 89999984 48999999999987654
Q ss_pred eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 465 DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 465 ~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.+..|...|++++|+|+|++|++++.||.|++|++.+++...
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 366899999999999999999999999999999999887654
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=244.98 Aligned_cols=252 Identities=10% Similarity=0.202 Sum_probs=201.8
Q ss_pred eecccceeecCCCC-eEEee----------ecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe
Q 010037 235 IDRHGSATLKPGDH-ELTLG----------QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG 303 (519)
Q Consensus 235 ~~~~~~~~~sp~g~-~lasg----------s~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs 303 (519)
...+.+++|+|++. +|++| +.|+.|+||++...... .... ...|...|.+++|+|++++|++|+
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~----~~~~-~~~~~~~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE----KPIA-SLQVDSKFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC----SCSC-CCCCSSCEEEEEECSSSSCEEEEE
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC----cEEE-EEecCCceEEEEECCCCCeEEEEc
Confidence 35677899999997 89999 88999999999865422 0111 235889999999999999999999
Q ss_pred CCCcEEEEeccc----CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccc--
Q 010037 304 EDGTVRVWKVIE----HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL-- 377 (519)
Q Consensus 304 ~Dg~I~iWd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-- 377 (519)
.||.|++|++.+ .+....+..+...+.++.|.+.....++ .++.++.+.+|+.......
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~---------------s~~~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLA---------------SGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEE---------------EECSSSCEEBCBTTTTSSCTT
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEE---------------EEcCCCeEEEEECCCCccccc
Confidence 999999999987 3466677777788888888776333332 3445667777776554310
Q ss_pred ---ccceeEeeccCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEec-C------CCcEEEEEEeeCCCCEEE
Q 010037 378 ---EKPLHEFQGHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-H------NNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 378 ---~~~~~~~~~h~~~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h------~~~V~~v~fsp~d~~~l~ 445 (519)
...+..+.+|...|.+++|+|+ + +|++++.|+.|++||+++++++..+. + ...|++++|+|.+..+|+
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 1112334679999999999998 4 99999999999999999999998886 3 789999999994347999
Q ss_pred EEeCCC---eEEEEEcCCC-cEE-eec-cCCCceEEEEEee-CCCEEEEEecCCeEEEEECCCCeeee
Q 010037 446 SGSIDG---KVRIWEVRRC-QVV-DYT-DIREIVSAVCYCP-DGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 446 sgs~Dg---~V~iwd~~~~-~~~-~~~-~~~~~V~~v~~sp-dg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+++.|+ .|++||++++ +.+ .+. .|...|++++|+| ++++|++++.||.|++||+.+++...
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce
Confidence 999999 9999999986 444 355 6899999999999 99999999999999999998876543
No 55
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=3.1e-27 Score=238.62 Aligned_cols=213 Identities=23% Similarity=0.392 Sum_probs=180.4
Q ss_pred cceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeee
Q 010037 277 GQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (519)
Q Consensus 277 ~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (519)
..++.+|.+.|++++|+|++++||||+.||+|+|||..+++....+..+...+.++.|.+....
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~---------------- 120 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCA---------------- 120 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSE----------------
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCE----------------
Confidence 3568899999999999999999999999999999999999888888877777777777765421
Q ss_pred eeccCCCeeEEEeCCcccc--ccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEE
Q 010037 357 SLRKSSDLTCVVLPPKVFR--LLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVT 432 (519)
Q Consensus 357 ~~~~s~~~~~~~~~~~~~~--~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~ 432 (519)
.+.++.++.+.+|+..... ........+.+|...|.+++|+|++ .|++++.|++|++||+.+++++..+. |...|+
T Consensus 121 lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~ 200 (354)
T 2pbi_B 121 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVL 200 (354)
T ss_dssp EEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeE
Confidence 2344556666666543221 1123456778899999999999999 99999999999999999999998886 999999
Q ss_pred EEEEeeC-CCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 433 SVAFNPV-DDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 433 ~v~fsp~-d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
+++|+|. ++++|++|+.||+|++||+++++++ .+..|...|++++|+|++++|++|+.||.|++||+++++..
T Consensus 201 ~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 201 CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 9999883 3689999999999999999999877 46789999999999999999999999999999999876543
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=5.2e-28 Score=245.91 Aligned_cols=249 Identities=14% Similarity=0.174 Sum_probs=194.4
Q ss_pred CCeeeEeecccceeecCCC-CeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc-CCCEEEEEeCCC
Q 010037 229 GAMARIIDRHGSATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDG 306 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g-~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~LaSgs~Dg 306 (519)
..+..|...+.+++|+|++ .+|++|+.||.|+||++........ ..+.+|...|.+++|+| ++++|++++.|+
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF-----IQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEE-----ECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccccee-----eecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3456677888899999999 9999999999999999985443211 12247999999999999 789999999999
Q ss_pred cEEEEecccCeeeceeeccC---CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 307 TVRVWKVIEHERLDGFDVQD---TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
.|++||+.+ .....+..+. ..+.++.+.++.. ..+.++.++.+.+|+.. .+++..
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~d~~i~i~d~~-----~~~~~~ 199 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ----------------MLATGDSTGRLLLLGLD-----GHEIFK 199 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT----------------EEEEEETTSEEEEEETT-----SCEEEE
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC----------------EEEEECCCCCEEEEECC-----CCEEEE
Confidence 999999986 3344443332 3345555554332 12344566777777763 567888
Q ss_pred eeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCC----CeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEE
Q 010037 384 FQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGI----DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (519)
Q Consensus 384 ~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~----~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd 457 (519)
+.+|...|.+++|+|++ +|++++.|++|++||+++ +.++..+.|...|++++|+|.++.+|++++.|+.|++||
T Consensus 200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence 99999999999999998 799999999999999998 778888899999999999997789999999999999999
Q ss_pred cCCCcEE-eeccC-------C----------CceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 458 VRRCQVV-DYTDI-------R----------EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 458 ~~~~~~~-~~~~~-------~----------~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+++++.. .+..| . ..+..++|+|+|++ +|+.||.|+|||+.+++++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~ 344 (383)
T 3ei3_B 280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVH 344 (383)
T ss_dssp TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEE
T ss_pred CCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceee
Confidence 9987654 22211 2 33445667777766 77789999999999887644
No 57
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=3.7e-28 Score=251.60 Aligned_cols=267 Identities=15% Similarity=0.230 Sum_probs=187.8
Q ss_pred eecccceeecCCCCeEEeeecCCeEEEeeCCcccc----ccccccccceeecCC------------CCEEEEEEccCC--
Q 010037 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSR----ELSSLYTGQEFLAHE------------GSILTMKFSLDG-- 296 (519)
Q Consensus 235 ~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~----~~~~~~~~~~l~~H~------------~~I~~l~fspdg-- 296 (519)
.+.+.+++|+|+|.+||+|+.||.|+||++..... ..........+.+|. +.|.+++|+|++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 46777899999999999999999999999886542 111222345678998 899999999998
Q ss_pred CEEEEEeCCCcEEEEecccCeeeceeeccCC--------------CCc-------------eEEEeecCCCCeEEeeccC
Q 010037 297 QYLASGGEDGTVRVWKVIEHERLDGFDVQDT--------------DPS-------------CLYFTINHLSQLIPIDVDK 349 (519)
Q Consensus 297 ~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~--------------~~~-------------~~~~~~~~~~~~~~~~~~~ 349 (519)
.+|++++.||+|++|++.++........... ... ...+...+...+..+.+..
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 7999999999999999987554211000000 000 0001112222232322222
Q ss_pred CceeeeeeeccCCCeeEEEeCCcccccccc----ceeEeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeE--
Q 010037 350 EKIDKTKSLRKSSDLTCVVLPPKVFRLLEK----PLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRC-- 421 (519)
Q Consensus 350 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~-- 421 (519)
... ..+.+ .++.+.+|+......... ....+.+|...|.+++|+|++ +|++|+.|++|++||+++++.
T Consensus 188 ~~~---~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 188 DYE---TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp TSS---EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred CCC---EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 111 11233 577788887763211000 011356899999999999986 999999999999999999886
Q ss_pred --EEEec-CCC------------cEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC-CcEE-eeccCCCc------------
Q 010037 422 --LRVFS-HNN------------YVTSVAFNPVDDNYFISGSIDGKVRIWEVRR-CQVV-DYTDIREI------------ 472 (519)
Q Consensus 422 --~~~~~-h~~------------~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~-~~~~-~~~~~~~~------------ 472 (519)
+..+. |.. .|++++|+| ++.+|++++. +.|+|||+++ ++.+ .+..|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 66665 544 899999999 9999999999 9999999997 6655 34444321
Q ss_pred ---eEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 473 ---VSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 473 ---V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
+..++|+|+|++|++|+.||.|++||+.+++.+.+
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEE
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceee
Confidence 33499999999999999999999999999887653
No 58
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.7e-28 Score=249.93 Aligned_cols=249 Identities=11% Similarity=0.208 Sum_probs=200.6
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC-CCEEEEEeCCCcEEEEe
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWK 312 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~LaSgs~Dg~I~iWd 312 (519)
+...+.+++|+|++.+|++|+.||.|+||++...... ......+.+|...|.+++|+|+ +++|++++.||.|++||
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNA---INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSC---CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeeccccccc---ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 3456778999999999999999999999999852211 1123456789999999999998 89999999999999999
Q ss_pred cccCe------eece---eeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 313 VIEHE------RLDG---FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 313 ~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
+.+++ .... +..+...+.++.|.+.....+ +.++.++.+.+|+.... +.+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l---------------~~~~~dg~v~iwd~~~~----~~~~~ 203 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVF---------------ASAGSSNFASIWDLKAK----KEVIH 203 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEE---------------EEESSSSCEEEEETTTT----EEEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEE---------------EEEcCCCCEEEEECCCC----CcceE
Confidence 98876 2222 234555666777765532222 33455667777776542 33455
Q ss_pred eecc------CCCeeEEEEcCCC--eEEEEeCCC---cEEEEECCCC-eEEEEec--CCCcEEEEEEeeCCCCEEEEEeC
Q 010037 384 FQGH------SSEVLDLSWSKNG--FLLSSSADK---TVRLWQVGID-RCLRVFS--HNNYVTSVAFNPVDDNYFISGSI 449 (519)
Q Consensus 384 ~~~h------~~~V~~l~~sp~~--~L~sgs~Dg---~V~lWdl~~~-~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~ 449 (519)
+..| ...|.+++|+|++ +|++++.|+ .|++||++++ .++..+. |...|++++|+|.++.+|++++.
T Consensus 204 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 204 LSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp ECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred EeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 5554 7899999999997 899999998 9999999986 6666665 89999999999977899999999
Q ss_pred CCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCC-CEEEEEecCCeEEEEECCCCee
Q 010037 450 DGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 450 Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg-~~l~sgs~dg~v~iwdl~~~~l 504 (519)
||.|++||+++++.+ .+..|...|++++|+|++ .+|++++.||.|++||+.+.+.
T Consensus 284 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 284 DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 999999999998877 577889999999999999 8999999999999999987654
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=3.4e-28 Score=244.16 Aligned_cols=240 Identities=15% Similarity=0.188 Sum_probs=190.9
Q ss_pred ecccceeecCC----CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc-CCCEEEEEeCCCcEEE
Q 010037 236 DRHGSATLKPG----DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRV 310 (519)
Q Consensus 236 ~~~~~~~~sp~----g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~LaSgs~Dg~I~i 310 (519)
..+.+++|+|+ +.+|++|+.||.|+||++.... ....+.+|...|.+++|+| ++++|++|+.||.|++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~i 142 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ-------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRL 142 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC-------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce-------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 45667899999 6799999999999999987543 2345788999999999999 9999999999999999
Q ss_pred EecccCeeecee---eccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccc----------
Q 010037 311 WKVIEHERLDGF---DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL---------- 377 (519)
Q Consensus 311 Wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~---------- 377 (519)
||+.+++....+ ..+...+.++.|.+... ..+.++.++.+.+|+.......
T Consensus 143 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 143 WNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE----------------KIMSCGMDHSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp EETTTTEEEEEECSTTSCSSCEEEEEECTTSS----------------EEEEEETTSCEEEEESCSHHHHHHHHHHHTCC
T ss_pred EEeecCeEEEEecccccccCceeEEEECCCCC----------------EEEEecCCCCEEEEECCCCccccccceeEEec
Confidence 999999887777 45566666666655432 1223344556666665433221
Q ss_pred --------------ccceeEeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeE--------------EEEec-CC
Q 010037 378 --------------EKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRC--------------LRVFS-HN 428 (519)
Q Consensus 378 --------------~~~~~~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~--------------~~~~~-h~ 428 (519)
........+|...|.+++|+ ..+|++++.|+.|++||+.+... +..+. |.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ 285 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS
T ss_pred CCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccC
Confidence 11233445599999999999 33999999999999999987643 55554 88
Q ss_pred CcEEEEEEeeCC--CCEEEEEeCCCeEEEEEcCCCcEE-----eeccC--CCceEEEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 429 NYVTSVAFNPVD--DNYFISGSIDGKVRIWEVRRCQVV-----DYTDI--REIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 429 ~~V~~v~fsp~d--~~~l~sgs~Dg~V~iwd~~~~~~~-----~~~~~--~~~V~~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
..|++++|+| + +++|++|+.||.|++||+.+++.. .+..| ...|++++|+|+|++|++++.||.|++||+
T Consensus 286 ~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 286 CDIWYMRFSM-DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp CCSSCCCCEE-CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEEcC-CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 8999999999 8 999999999999999999987532 45555 789999999999999999999999999998
Q ss_pred C
Q 010037 500 K 500 (519)
Q Consensus 500 ~ 500 (519)
.
T Consensus 365 ~ 365 (366)
T 3k26_A 365 L 365 (366)
T ss_dssp -
T ss_pred c
Confidence 5
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=5.2e-28 Score=243.77 Aligned_cols=250 Identities=12% Similarity=0.141 Sum_probs=194.5
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+..|...+.+++|+|++++|++|+.||.|++|++...... ....+..|...|.+++|+|++++|++++.||.|++
T Consensus 48 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 122 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK-----PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 122 (372)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE-----EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEE
T ss_pred ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee-----eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEE
Confidence 4456677888999999999999999999999998654321 11234679999999999999999999999999999
Q ss_pred EecccCee---ecee-eccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccc-----------
Q 010037 311 WKVIEHER---LDGF-DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFR----------- 375 (519)
Q Consensus 311 Wd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~----------- 375 (519)
||+..+.. ...+ ..+...+.++.+.+... ..+.++.++.+.+|+.....
T Consensus 123 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 186 (372)
T 1k8k_C 123 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV----------------LLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186 (372)
T ss_dssp EEEETTTTEEEEEEECTTCCSCEEEEEECTTSS----------------EEEEEETTSCEEEEECCCTTTSCCCCCBTTB
T ss_pred EEecCCCcceeeeeeecccCCCeeEEEEcCCCC----------------EEEEEcCCCCEEEEEcccccccccccccccc
Confidence 99988763 2222 22344455555554321 12234455666677643211
Q ss_pred ---ccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCC
Q 010037 376 ---LLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID 450 (519)
Q Consensus 376 ---~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~D 450 (519)
...+.+..+.+|...|.+++|+|++ +|++++.|+.|++||+++++++..+. |...|++++|+| ++.+|++| .|
T Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d 264 (372)
T 1k8k_C 187 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT-ESSLVAAG-HD 264 (372)
T ss_dssp SCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEE-TTEEEEEE-TT
T ss_pred cccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEec-CCCEEEEE-eC
Confidence 1245677788999999999999999 99999999999999999999998886 888999999999 88888887 89
Q ss_pred CeEEEEEcCC--CcE---------------------------------------Eee-ccCCCceEEEEEe-eCC---CE
Q 010037 451 GKVRIWEVRR--CQV---------------------------------------VDY-TDIREIVSAVCYC-PDG---KG 484 (519)
Q Consensus 451 g~V~iwd~~~--~~~---------------------------------------~~~-~~~~~~V~~v~~s-pdg---~~ 484 (519)
+.|++|++++ ++. ... ..|...|++++|. ++| ++
T Consensus 265 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~ 344 (372)
T 1k8k_C 265 CFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQ 344 (372)
T ss_dssp SSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSE
T ss_pred CeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceee
Confidence 9999999987 421 112 4789999999977 566 99
Q ss_pred EEEEecCCeEEEEECCCCe
Q 010037 485 GIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 485 l~sgs~dg~v~iwdl~~~~ 503 (519)
|++|+.||.|++||+.+++
T Consensus 345 l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 345 FCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEEEETTSEEEEEEHHHHH
T ss_pred EEEecCCCceEEEEecChh
Confidence 9999999999999997643
No 61
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=1.9e-27 Score=265.40 Aligned_cols=252 Identities=19% Similarity=0.248 Sum_probs=214.0
Q ss_pred CCeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 229 GAMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
..+.+|.+.+.+++|+|++.+||+|+.+|.|+||++..+. ..+.+.+|.++|.+++|+|++++|++|+.||.|
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc-------eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 3467788899999999999999999999999999987543 234578899999999999999999999999999
Q ss_pred EEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC
Q 010037 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (519)
++||+.+++.+..+..+...+.++.|.+.... .+.++.++.+.+|+.... ......+.+|.
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~----------------l~~~~~dg~i~vw~~~~~---~~~~~~~~~~~ 140 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY----------------VLSGSDDLTVKLWNWENN---WALEQTFEGHE 140 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSE----------------EEEEETTSEEEEEEGGGT---SEEEEEEECCS
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCE----------------EEEEcCCCEEEEEECCCC---ceEEEEEcCCC
Confidence 99999999998888888888888888765532 223445667777765432 23466788999
Q ss_pred CCeeEEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeC-CCCEEEEEeCCCeEEEEEcCCCcE
Q 010037 389 SEVLDLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPV-DDNYFISGSIDGKVRIWEVRRCQV 463 (519)
Q Consensus 389 ~~V~~l~~sp-~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~-d~~~l~sgs~Dg~V~iwd~~~~~~ 463 (519)
..|.+++|+| ++ .|++++.|++|++||+.++.....+. +...+++++|+|. ++.+|++|+.||.|++||+++++.
T Consensus 141 ~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 9999999999 66 99999999999999999887776664 5588999999983 578999999999999999999887
Q ss_pred E-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 464 V-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 464 ~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+ .+..|...|++++|+|+|++|++++.||.|++||+.+++...
T Consensus 221 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 7 466789999999999999999999999999999999876543
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.9e-27 Score=236.70 Aligned_cols=253 Identities=13% Similarity=0.164 Sum_probs=197.2
Q ss_pred eeEeecccceeecCCCCeE-Eeeec---CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC---CCEEEEEeC
Q 010037 232 ARIIDRHGSATLKPGDHEL-TLGQR---MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD---GQYLASGGE 304 (519)
Q Consensus 232 ~~~~~~~~~~~~sp~g~~l-asgs~---dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd---g~~LaSgs~ 304 (519)
.+|...+.+++|+|++..+ ++|+. ||.|+||++....... ....+|..+|.+++|+|+ +++|++|+.
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL------LREIEKAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE------EEEEEESSCEEEEECTTCCTTTCCEEEEET
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc------eeeecccCcEEEEEEcCCCCCCceEEEecC
Confidence 4567788899999999655 56665 9999999998644321 123479999999999998 699999999
Q ss_pred CCcEEEEecccCe-eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 305 DGTVRVWKVIEHE-RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 305 Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
||.|++||+.+++ ....+..+...+.++.+.+.- .+. ......+.++.++.+.+|+..... .++..
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~s---~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~ 155 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGL-------GIG---EGAPEIVTGSRDGTVKVWDPRQKD---DPVAN 155 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGG-------GCC----CCCEEEEEETTSCEEEECTTSCS---SCSEE
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeecccc-------ccC---CCccEEEEEeCCCeEEEEeCCCCC---Cccee
Confidence 9999999999887 677777777766666554310 000 001123445667788888876532 24556
Q ss_pred eeccCC----CeeEEE----EcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeC--CCCEEEEEeCCCe
Q 010037 384 FQGHSS----EVLDLS----WSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPV--DDNYFISGSIDGK 452 (519)
Q Consensus 384 ~~~h~~----~V~~l~----~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~--d~~~l~sgs~Dg~ 452 (519)
+..|.+ .|.+++ |+|++ +|++++.|+.|++||+++++.+....|...|++++|+|. ++.+|++|+.||.
T Consensus 156 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 156 MEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp ECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE
T ss_pred ccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe
Confidence 655554 899998 67888 999999999999999999999888889999999999995 6889999999999
Q ss_pred EEEEEcCCCcEE------eeccCCCceEEEEEeeCCC-EEEEEecCCeEEEEECCCCe
Q 010037 453 VRIWEVRRCQVV------DYTDIREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 453 V~iwd~~~~~~~------~~~~~~~~V~~v~~spdg~-~l~sgs~dg~v~iwdl~~~~ 503 (519)
|++||+++++.. ....|...|++++|+|+++ +|++++.||.|++||+..+.
T Consensus 236 i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 236 FHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred EEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 999999876543 2337999999999999998 89999999999999998643
No 63
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=8.4e-28 Score=240.64 Aligned_cols=248 Identities=13% Similarity=0.188 Sum_probs=189.3
Q ss_pred eEeecccceeecCC---CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEE------ccCCCEEEEEe
Q 010037 233 RIIDRHGSATLKPG---DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKF------SLDGQYLASGG 303 (519)
Q Consensus 233 ~~~~~~~~~~~sp~---g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~f------spdg~~LaSgs 303 (519)
.|...+.+++|+|+ +.+|++|+.||.|++|++..... ....+.+|...|.++.| +|++++|++++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~ 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM------PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS------CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc------cEEEEEecccceEEEeeccccccCCCccEEEEEe
Confidence 35567788999999 69999999999999999985441 23457899999999955 68999999999
Q ss_pred CCCcEEEEecccCe-eeceeeccCC----CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc
Q 010037 304 EDGTVRVWKVIEHE-RLDGFDVQDT----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (519)
Q Consensus 304 ~Dg~I~iWd~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 378 (519)
.||.|++||+.++. ....+..+.. .+.++.+... +. ......+.++.++.+.+|+.....
T Consensus 137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~---~~~~~l~~~~~d~~i~i~d~~~~~--- 201 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA---------YN---QEERVVCAGYDNGDIKLFDLRNMA--- 201 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC---------CC----CCCEEEEEETTSEEEEEETTTTE---
T ss_pred CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec---------cC---CCCCEEEEEccCCeEEEEECccCc---
Confidence 99999999999876 4555544333 2223332110 00 011122344556777777766533
Q ss_pred cceeEeeccCCCeeEEEEcC---CC-eEEEEeCCCcEEEEECCCCeEEEEe------cCCCcEEEEEEeeCCCC-EEEEE
Q 010037 379 KPLHEFQGHSSEVLDLSWSK---NG-FLLSSSADKTVRLWQVGIDRCLRVF------SHNNYVTSVAFNPVDDN-YFISG 447 (519)
Q Consensus 379 ~~~~~~~~h~~~V~~l~~sp---~~-~L~sgs~Dg~V~lWdl~~~~~~~~~------~h~~~V~~v~fsp~d~~-~l~sg 447 (519)
......|...|.+++|+| ++ +|++++.|+.|++||+++++++..+ .|...|++++|+| ++. +|++|
T Consensus 202 --~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~ 278 (357)
T 3i2n_A 202 --LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP-QNRELFLTA 278 (357)
T ss_dssp --EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET-TEEEEEEEE
T ss_pred --eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC-CCCcEEEEE
Confidence 234567899999999999 77 9999999999999999876654333 4999999999999 777 89999
Q ss_pred eCCCeEEEEEcCCCc--------------------EEeeccCCCceEEEEEeeCCCEEE-EEecCCeEEEEECCCCee
Q 010037 448 SIDGKVRIWEVRRCQ--------------------VVDYTDIREIVSAVCYCPDGKGGI-VGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 448 s~Dg~V~iwd~~~~~--------------------~~~~~~~~~~V~~v~~spdg~~l~-sgs~dg~v~iwdl~~~~l 504 (519)
+.||.|++||++++. +..+..|...|++++|+|+|++|+ +++.||.|+|||+.+.++
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 999999999998632 225778899999999999999998 799999999999987654
No 64
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.6e-27 Score=245.43 Aligned_cols=258 Identities=17% Similarity=0.231 Sum_probs=201.7
Q ss_pred eeeEeecccceeecCC-CCeEEeeecCCeEEEeeCCccccccc---cccccceeecCCCCEEEEEEccCCC-EEEEEeCC
Q 010037 231 MARIIDRHGSATLKPG-DHELTLGQRMRRVRVHPVKKQSRELS---SLYTGQEFLAHEGSILTMKFSLDGQ-YLASGGED 305 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~-g~~lasgs~dg~I~vw~~~~~~~~~~---~~~~~~~l~~H~~~I~~l~fspdg~-~LaSgs~D 305 (519)
...|...+.+++|+|+ +.+||+|+.+|.|+||++........ .......+.+|...|.+|+|+|++. +|++|+.|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 4557778889999997 78999999999999999975321110 1334456789999999999999988 99999999
Q ss_pred CcEEEEecccCee-------eceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc
Q 010037 306 GTVRVWKVIEHER-------LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (519)
Q Consensus 306 g~I~iWd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 378 (519)
|.|++|++.++.. ...+..+...+.++.|.+.....+ +.++.++.+.+|+.+... ..
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l---------------~s~~~dg~i~i~d~~~~~-~~ 267 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF---------------GSVADDQKLMIWDTRNNN-TS 267 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE---------------EEEETTSEEEEEETTCSC-SS
T ss_pred CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE---------------EEEeCCCeEEEEECCCCC-CC
Confidence 9999999987432 223334455556666655433222 234456677777776432 12
Q ss_pred cceeEeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCC-CeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEE
Q 010037 379 KPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGI-DRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVR 454 (519)
Q Consensus 379 ~~~~~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~-~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~ 454 (519)
+++..+..|...|++++|+|++ +|++|+.|++|++||+++ ..++..+. |...|++++|+|.+..+|++++.|+.|+
T Consensus 268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 4567788999999999999988 688999999999999998 56677775 9999999999994346899999999999
Q ss_pred EEEcCC--------------CcEE-eeccCCCceEEEEEeeCCC-EEEEEecCCeEEEEECCCCee
Q 010037 455 IWEVRR--------------CQVV-DYTDIREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 455 iwd~~~--------------~~~~-~~~~~~~~V~~v~~spdg~-~l~sgs~dg~v~iwdl~~~~l 504 (519)
|||+.. .+++ ....|...|++++|+|+++ +|++++.||.|+||++....+
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 999987 2333 5667888999999999999 899999999999999976543
No 65
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.9e-28 Score=268.02 Aligned_cols=252 Identities=18% Similarity=0.252 Sum_probs=202.8
Q ss_pred CeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC--CCEEEEEeCCCc
Q 010037 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD--GQYLASGGEDGT 307 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd--g~~LaSgs~Dg~ 307 (519)
.+.+|.+.+.+++|+|++++|++|+.||.|+||++..... .....+.+|.++|++++|+|+ +++|++|+.||.
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-----~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-----EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-----ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 4567888999999999999999999999999999874322 223467899999999999988 999999999999
Q ss_pred EEEEecccCe--eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 308 VRVWKVIEHE--RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 308 I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
|++||+.+++ ....+..+...+.++.+.+...... .+.++.++.+.+|+...... .....+.
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~--------------l~sgs~dg~I~vwdl~~~~~--~~~~~~~ 142 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL--------------LLVASSDGKVSVVEFKENGT--TSPIIID 142 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE--------------EEEEETTSEEEEEECCSSSC--CCCEEEE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCE--------------EEEEeCCCcEEEEEeecCCC--cceeEee
Confidence 9999999887 5556666667777777766531211 23445666777777654321 2345678
Q ss_pred ccCCCeeEEEEcCC-------------C-eEEEEeCCCcEEEEECCCC----eEEEEec-CCCcEEEEEEeeCC---CCE
Q 010037 386 GHSSEVLDLSWSKN-------------G-FLLSSSADKTVRLWQVGID----RCLRVFS-HNNYVTSVAFNPVD---DNY 443 (519)
Q Consensus 386 ~h~~~V~~l~~sp~-------------~-~L~sgs~Dg~V~lWdl~~~----~~~~~~~-h~~~V~~v~fsp~d---~~~ 443 (519)
+|...|.+++|+|. + .|++|+.||+|++||++++ .++..+. |...|++++|+| + +.+
T Consensus 143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~~~~ 221 (753)
T 3jro_A 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSY 221 (753)
T ss_dssp CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEE
T ss_pred cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCCCCCE
Confidence 89999999999993 6 9999999999999999877 4555554 899999999999 7 899
Q ss_pred EEEEeCCCeEEEEEcCCCc------EEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 444 FISGSIDGKVRIWEVRRCQ------VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 444 l~sgs~Dg~V~iwd~~~~~------~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
|++|+.||.|++||+++++ ......|...|++++|+|+|++|++|+.||.|++|++.++.
T Consensus 222 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 9999999999999999863 22455688899999999999999999999999999998543
No 66
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-28 Score=259.50 Aligned_cols=246 Identities=11% Similarity=0.025 Sum_probs=174.2
Q ss_pred cCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC------CCEEEEEeCCCcEEEEecccCe
Q 010037 244 KPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD------GQYLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 244 sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd------g~~LaSgs~Dg~I~iWd~~~~~ 317 (519)
+|++..+++++.|++|+||++....... .....+.+|.+.|++|+|+|+ +.+||+|+.||+|+|||+.++.
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~---~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~ 246 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHC---VKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNA 246 (524)
T ss_dssp ------------CEEEEEEEEETTTCCE---EEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCc---eEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCc
Confidence 3444455556788999999986543211 112346778899999999996 5799999999999999998764
Q ss_pred eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEE--E
Q 010037 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL--S 395 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l--~ 395 (519)
........... .......+...+..+.+.... ..+.++.++.+.+|+.... ..+...+.+|...|.++ +
T Consensus 247 ~~~~~~~~~~~--p~~~l~~h~~~v~sv~~s~~~----~lasgs~DgtV~lWD~~~~---~~~~~~~~~H~~~V~sv~~~ 317 (524)
T 2j04_B 247 TDVHVFKMCEK--PSLTLSLADSLITTFDFLSPT----TVVCGFKNGFVAEFDLTDP---EVPSFYDQVHDSYILSVSTA 317 (524)
T ss_dssp SSSSEEECCCS--CSEEECCTTTCEEEEEESSSS----EEEEEETTSEEEEEETTBC---SSCSEEEECSSSCEEEEEEE
T ss_pred cccccceeecC--ceEEEEcCCCCEEEEEecCCC----eEEEEeCCCEEEEEECCCC---CCceEEeecccccEEEEEEE
Confidence 32100000000 000011122233333332211 3467788899999987643 23556788999999999 5
Q ss_pred EcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CC--CcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccC
Q 010037 396 WSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HN--NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDI 469 (519)
Q Consensus 396 ~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~--~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~ 469 (519)
|+|++ +|+||+.|++|+|||+++++++..+. |. ..|++|+|+| ++..|++++.|++|++||++++.++ .+.+|
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH 396 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSR 396 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEEC
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecC
Confidence 78875 88999999999999999887766553 43 3589999999 8999999999999999999998764 57789
Q ss_pred CCceEEEEEeeCCCEEEEEecCCeEEEEECCCC
Q 010037 470 REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 470 ~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~ 502 (519)
...|++++|+|+|++|++|+.||+|++||+..+
T Consensus 397 ~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 397 ETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp SSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred CCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 999999999999999999999999999998654
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=3.7e-27 Score=242.15 Aligned_cols=238 Identities=16% Similarity=0.163 Sum_probs=195.5
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
...+++|+|++++|++|+.||.|++|+....... ..+..| ..+....|+|++++|++|+.||.|++||+.++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 129 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS-------KMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN 129 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETT-------TTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccccee-------eEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc
Confidence 3456899999999999999999999998754432 123344 44555678999999999999999999999999
Q ss_pred eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEE
Q 010037 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (519)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 396 (519)
+....+..+...+.++.|.++.. ..+.++.++.+.+|+... .+.+..+.+|...|.+++|
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~~----------------~l~s~s~d~~i~iwd~~~----~~~~~~~~~h~~~v~~~~~ 189 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSGE----------------ALISSSQDMQLKIWSVKD----GSNPRTLIGHRATVTDIAI 189 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTSS----------------EEEEEETTSEEEEEETTT----CCCCEEEECCSSCEEEEEE
T ss_pred ceeeecccccCccEEEEECCCCC----------------EEEEEeCCCeEEEEeCCC----CcCceEEcCCCCcEEEEEE
Confidence 88777777777777777766532 123445667788887654 3456788999999999999
Q ss_pred cCCC-eEEEEeCCCcEEEEECCCCeEEEEec----CCCcEEEEEE---------------------eeCCCCEEEEEeCC
Q 010037 397 SKNG-FLLSSSADKTVRLWQVGIDRCLRVFS----HNNYVTSVAF---------------------NPVDDNYFISGSID 450 (519)
Q Consensus 397 sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~----h~~~V~~v~f---------------------sp~d~~~l~sgs~D 450 (519)
+|++ +|++++.|++|++||+++++++..+. +...|.+++| +| ++++|++|+.|
T Consensus 190 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d 268 (420)
T 3vl1_A 190 IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVS 268 (420)
T ss_dssp ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETT
T ss_pred cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCC
Confidence 9999 99999999999999999999998885 5556666665 56 78899999999
Q ss_pred CeEEEEEcCCCcEEe--eccCCCceEEEEEeeCCC-EEEEEecCCeEEEEECCCCe
Q 010037 451 GKVRIWEVRRCQVVD--YTDIREIVSAVCYCPDGK-GGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 451 g~V~iwd~~~~~~~~--~~~~~~~V~~v~~spdg~-~l~sgs~dg~v~iwdl~~~~ 503 (519)
|.|++||+++++.+. ...|...|++++|+|+++ +|++|+.||.|++||+++++
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 999999999987663 345788999999999999 99999999999999998764
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.4e-27 Score=241.56 Aligned_cols=250 Identities=15% Similarity=0.276 Sum_probs=194.5
Q ss_pred EeecccceeecCCCC-eEEeeecCCeEEEeeC----Ccccc-----cccc----ccccceeecCCCCEEEEEEccCCCEE
Q 010037 234 IIDRHGSATLKPGDH-ELTLGQRMRRVRVHPV----KKQSR-----ELSS----LYTGQEFLAHEGSILTMKFSLDGQYL 299 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~-~lasgs~dg~I~vw~~----~~~~~-----~~~~----~~~~~~l~~H~~~I~~l~fspdg~~L 299 (519)
|.+.+.+++|+|++. +||+|+.||.|+||++ ..... .... ........+|.+.|.+++|+|++++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 447888999999999 9999999999999999 65441 0100 00001122378899999999999999
Q ss_pred EEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccc
Q 010037 300 ASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (519)
Q Consensus 300 aSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 379 (519)
++|+.||.|++|+ .+++....+..+...+.++.|.+.... .+.++.++.+.+|+.... +
T Consensus 124 ~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~----------------l~~~~~d~~i~iwd~~~~----~ 182 (425)
T 1r5m_A 124 VTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTH----------------IISMDVENVTILWNVISG----T 182 (425)
T ss_dssp EEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSE----------------EEEEETTCCEEEEETTTT----E
T ss_pred EEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCE----------------EEEEecCCeEEEEECCCC----c
Confidence 9999999999999 667777777777777777777654321 122334556666665432 3
Q ss_pred ceeEeeccCCC---------------eeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCE
Q 010037 380 PLHEFQGHSSE---------------VLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNY 443 (519)
Q Consensus 380 ~~~~~~~h~~~---------------V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~ 443 (519)
.+..+..|... +.+++|+|++.+++++.|+.|++||+.+++.+..+. |...|++++|+| ++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 261 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNKL 261 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTTE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCCE
Confidence 34555555555 999999999999999999999999999998888775 899999999999 8999
Q ss_pred EEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 444 FISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 444 l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
|++++.|+.|++||+++++.+ .+..|...|.+++|+|++ +|++++.||.|++||+.+++...
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE
Confidence 999999999999999998766 466789999999999999 99999999999999999887654
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=1.6e-26 Score=248.86 Aligned_cols=249 Identities=18% Similarity=0.237 Sum_probs=204.6
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCC-EEEEEEcc--CCCEEEEEeCCCcEEE
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGS-ILTMKFSL--DGQYLASGGEDGTVRV 310 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~-I~~l~fsp--dg~~LaSgs~Dg~I~i 310 (519)
+...+.+++|+|++++|++++ ++.|+||++...... ......+.+|.+. |.+++|+| ++++||+|+.||.|++
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~---~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSK---VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCS---SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred ccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCc---cccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 456677899999999999998 889999998854111 1234567899999 99999999 9999999999999999
Q ss_pred EecccC--------eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccccee
Q 010037 311 WKVIEH--------ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (519)
Q Consensus 311 Wd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 382 (519)
||+.++ .....+..+...+.++.|.++....+. .... ....+.+.+|+. .+.+.
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~~-----------~~~~~~v~~~d~------~~~~~ 154 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV-VGEG-----------RDNFGVFISWDS------GNSLG 154 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE-EECC-----------SSCSEEEEETTT------CCEEE
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE-eccC-----------CCCccEEEEEEC------CCcce
Confidence 999755 556666666777777777665432111 1111 011256666662 34677
Q ss_pred EeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CCC---cEEEEEEeeCC-CCEEEEEeCCCeEEE
Q 010037 383 EFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNN---YVTSVAFNPVD-DNYFISGSIDGKVRI 455 (519)
Q Consensus 383 ~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~---~V~~v~fsp~d-~~~l~sgs~Dg~V~i 455 (519)
.+.+|...|.+++|+|++ .|++++.|+.|++||+.+++++..+. |.. .|++++|+| + +++|++++.||.|++
T Consensus 155 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 155 EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISC 233 (615)
T ss_dssp ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEE
T ss_pred eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEE
Confidence 888999999999999998 79999999999999999999999887 888 899999999 7 999999999999999
Q ss_pred EEcCCCcEEeec-----cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 456 WEVRRCQVVDYT-----DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 456 wd~~~~~~~~~~-----~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
||+++++.+... .|...|++++|+ ++++|++++.||.|++||+.+++...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 999999888654 899999999999 99999999999999999999877544
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=7.5e-27 Score=239.50 Aligned_cols=245 Identities=21% Similarity=0.296 Sum_probs=199.9
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceee-cCCCCEEEEEEccCCCEEEEEeCCCcEEEEe
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL-AHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~-~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd 312 (519)
+.+.+...++++++..+++++.||.|++|++..+... ..+. .|...|.+++|+|++++|++|+.||.|++||
T Consensus 90 ~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~-------~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 90 IIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVS-------ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp CCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEE-------EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEe-------EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 3444444455555677889999999999999765432 1223 3899999999999999999999999999999
Q ss_pred cccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCee
Q 010037 313 VIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (519)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 392 (519)
+.+++.+..+..+...+.++.+.. . ..+.++.++.+.+|+.... ...+..+.+|...|.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~---~---------------~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~ 221 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSWNR---H---------------VLSSGSRSGAIHHHDVRIA---NHQIGTLQGHSSEVC 221 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEET---T---------------EEEEEETTSEEEEEETTSS---SCEEEEEECCSSCEE
T ss_pred CcCCeEEEEecCCCCceEEEEECC---C---------------EEEEEcCCCCEEEEecccC---cceeeEEcCCCCCee
Confidence 999988888877766666666521 1 2234556677778776532 345777889999999
Q ss_pred EEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEe--CCCeEEEEEcCCCcEEeecc
Q 010037 393 DLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGS--IDGKVRIWEVRRCQVVDYTD 468 (519)
Q Consensus 393 ~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs--~Dg~V~iwd~~~~~~~~~~~ 468 (519)
+++|+|++ +|++++.|+.|++||+++++++..+. |...|++++|+|.+..++++|+ .|+.|++||+++++.+....
T Consensus 222 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 222 GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 99999999 99999999999999999999988885 9999999999995567777766 79999999999999887777
Q ss_pred CCCceEEEEEeeCCCEEEEEe--cCCeEEEEECCCCeeee
Q 010037 469 IREIVSAVCYCPDGKGGIVGT--MTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 469 ~~~~V~~v~~spdg~~l~sgs--~dg~v~iwdl~~~~l~~ 506 (519)
+...|++++|+|++++|++++ .||.|++||+.+++...
T Consensus 302 ~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 302 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE
T ss_pred CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee
Confidence 888999999999999999954 89999999998865543
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=4.7e-27 Score=274.47 Aligned_cols=245 Identities=21% Similarity=0.316 Sum_probs=210.2
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+.+|.+.+.+++|+|+++++++|+.||+|+||++..... ...+.+|.+.|.+++|+|++++|++|+.||.|+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~-------~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-------LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE-------EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 456778888999999999999999999999999975442 3457899999999999999999999999999999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
||+.+++.+..+..+...+.++.|.+.....++ +.++.++.+.+|+... .+.+..+.+|...
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l--------------~sg~~d~~v~vwd~~~----~~~~~~~~~h~~~ 745 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLL--------------ATGSNDFFLKLWDLNQ----KECRNTMFGHTNS 745 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEE--------------EEEETTSCEEEEETTS----SSEEEEECCCSSC
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEE--------------EEEeCCCeEEEEECCC----cchhheecCCCCC
Confidence 999999999999888888888888765433332 3445666777787654 3457778899999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--------------------------------------------
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-------------------------------------------- 425 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~-------------------------------------------- 425 (519)
|.+++|+|++ +|++++.|++|++||+.+++....+
T Consensus 746 v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 746 VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 9999999999 9999999999999999876554332
Q ss_pred ------------cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCC
Q 010037 426 ------------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTG 492 (519)
Q Consensus 426 ------------~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg 492 (519)
.|...|++++|+| ++.++++++.||.|++||+.++..+ .+..|...|++++|+|+|++|++++.||
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCC
Confidence 3667889999999 9999999999999999999998877 5788999999999999999999999999
Q ss_pred eEEEEECCC
Q 010037 493 NCRFYDIKG 501 (519)
Q Consensus 493 ~v~iwdl~~ 501 (519)
.|++|++.+
T Consensus 905 ~v~vw~~~~ 913 (1249)
T 3sfz_A 905 TIRVWETKK 913 (1249)
T ss_dssp CEEEEEHHH
T ss_pred eEEEEEccc
Confidence 999999753
No 72
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2.5e-27 Score=236.18 Aligned_cols=251 Identities=12% Similarity=0.102 Sum_probs=195.0
Q ss_pred eeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCC-EEEEEeCCCcEEE
Q 010037 232 ARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQ-YLASGGEDGTVRV 310 (519)
Q Consensus 232 ~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~-~LaSgs~Dg~I~i 310 (519)
..|.+.+.+++|+|++.+|++|+.||.|+||++....... ....+.+|...|.+++|+|+++ +|++|+.||.|++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV----DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE----EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc----cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 3567788899999999999999999999999987544211 1234568999999999999999 9999999999999
Q ss_pred Eec-ccCeeeceeec--cCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccc-----cccee
Q 010037 311 WKV-IEHERLDGFDV--QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL-----EKPLH 382 (519)
Q Consensus 311 Wd~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-----~~~~~ 382 (519)
|++ .+++. ..+.. +...+.++.+.+ ...+ +.++.++.+.+|+....... .+++.
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l---------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 145 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG--DDKL---------------IAASWDGLIEVIDPRNYGDGVIAVKNLNSN 145 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET--TTEE---------------EEEETTSEEEEECHHHHTTBCEEEEESCSS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC--CCEE---------------EEEcCCCeEEEEcccccccccccccCCeee
Confidence 999 77754 44555 555666666655 2222 23455667777776541100 22344
Q ss_pred EeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCC-CeE---EEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEc
Q 010037 383 EFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGI-DRC---LRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEV 458 (519)
Q Consensus 383 ~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~-~~~---~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~ 458 (519)
.+. |...|.+++|+|++ |++++.|+.|++||+++ +.. .....|...|++++|+|.++++|++|+.||.|++|++
T Consensus 146 ~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 146 NTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp SSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred EEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 444 88999999999987 99999999999999998 443 2333588899999999845789999999999999999
Q ss_pred CCC------cEE-eeccCCC---------ceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 459 RRC------QVV-DYTDIRE---------IVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 459 ~~~------~~~-~~~~~~~---------~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+.. +.. .+..|.. .|++++|+|++++|++++.||.|++||+.++++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK 287 (342)
T ss_dssp CTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhh
Confidence 875 333 4555544 99999999999999999999999999999887654
No 73
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=3.9e-27 Score=242.02 Aligned_cols=233 Identities=16% Similarity=0.201 Sum_probs=186.8
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeee
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL 319 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~ 319 (519)
...++|++.+|++|+.||.|+||++..... ...+.+|.+.|.+++|+|++++|++|+.|+.|++||+.+++..
T Consensus 102 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 102 VDTAKLQMRRFILGTTEGDIKVLDSNFNLQ-------REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp EEEECSSSCEEEEEETTSCEEEECTTSCEE-------EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC
T ss_pred EEEEecCCCEEEEEECCCCEEEEeCCCcce-------eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc
Confidence 357899999999999999999999874432 2345689999999999999999999999999999999999988
Q ss_pred ceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec-------------
Q 010037 320 DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG------------- 386 (519)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~------------- 386 (519)
..+..+...+.++.|.++... + +.++.++.+.+|+.... +.+..+..
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~-l---------------~s~~~d~~v~iwd~~~~----~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRN-V---------------LSASLDGTIRLWECGTG----TTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTE-E---------------EEEETTSCEEEEETTTT----EEEEEECBTTBTTCCEEEEEE
T ss_pred eEEcCCCCcEEEEEEcCCCCE-E---------------EEEcCCCcEEEeECCCC----ceeEEeecCCCCCCCccEEEE
Confidence 888888888888888765421 1 23344555666655432 22233322
Q ss_pred -----------cCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCC-EEEEEeCCC
Q 010037 387 -----------HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDN-YFISGSIDG 451 (519)
Q Consensus 387 -----------h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~-~l~sgs~Dg 451 (519)
|...+.+++|+|++ +|++++.|+.|++||+++++.+..+. |...|++++|+| ++. +|++|+.||
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg 313 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDG-NNANYIYAGYENG 313 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECS-SCTTEEEEEETTS
T ss_pred ecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeC-CCCCEEEEEeCCC
Confidence 34667777788999 99999999999999999998887775 788999999999 777 999999999
Q ss_pred eEEEEEcCCCcE-E-eecc-CCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 452 KVRIWEVRRCQV-V-DYTD-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 452 ~V~iwd~~~~~~-~-~~~~-~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
.|++||+++++. + .+.. +...|+++ +.|++++|++++.||.|++|++.+
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEECC
T ss_pred eEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEeccC
Confidence 999999998753 3 4444 66778877 556888999999999999999876
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=1.2e-27 Score=243.21 Aligned_cols=242 Identities=13% Similarity=0.081 Sum_probs=187.2
Q ss_pred EeecccceeecC-CCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEe
Q 010037 234 IIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (519)
Q Consensus 234 ~~~~~~~~~~sp-~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd 312 (519)
|...+.+++|+| ++.+|++++.|+.|++|++..... . ......+|...|.+++|+|++++|++|+.||.|++||
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI--Q---VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE--E---EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce--E---EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 456777899999 789999999999999999984221 1 1111234568999999999999999999999999999
Q ss_pred cccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCee
Q 010037 313 VIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (519)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 392 (519)
+ +++.+..+..+...+.++.|.+.....+ +.++.++.+.+|+..........+..+ +|...|.
T Consensus 192 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l---------------~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~ 254 (383)
T 3ei3_B 192 L-DGHEIFKEKLHKAKVTHAEFNPRCDWLM---------------ATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVN 254 (383)
T ss_dssp T-TSCEEEEEECSSSCEEEEEECSSCTTEE---------------EEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEE
T ss_pred C-CCCEEEEeccCCCcEEEEEECCCCCCEE---------------EEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceE
Confidence 9 5677777777777777777776553222 334556677788776644444455555 7999999
Q ss_pred EEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEec-C-------C----------CcEEEEEEeeCCCCEEEEEeCCCe
Q 010037 393 DLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVFS-H-------N----------NYVTSVAFNPVDDNYFISGSIDGK 452 (519)
Q Consensus 393 ~l~~sp-~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h-------~----------~~V~~v~fsp~d~~~l~sgs~Dg~ 452 (519)
+++|+| ++ +|++++.|+.|++||+++++.+..+. | . ..+..++|+| ++.+ +|+.|+.
T Consensus 255 ~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~ 331 (383)
T 3ei3_B 255 AAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRT 331 (383)
T ss_dssp EEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCC
T ss_pred EEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC-Cccc--ccCCCCe
Confidence 999999 88 99999999999999999876655443 2 2 3444566666 5555 7778999
Q ss_pred EEEEEcCCCcEEe-ecc--CCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 453 VRIWEVRRCQVVD-YTD--IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 453 V~iwd~~~~~~~~-~~~--~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
|+|||+.+++.+. +.. +...+..++|+|+|++|++|+ ||.|+|||+++
T Consensus 332 i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 332 IDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999999998874 433 567788889999999999997 99999999874
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=6.9e-27 Score=239.62 Aligned_cols=211 Identities=17% Similarity=0.251 Sum_probs=178.9
Q ss_pred CeeeEeecccceeecC-CCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCC-CEEEEEeCCCc
Q 010037 230 AMARIIDRHGSATLKP-GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDG-QYLASGGEDGT 307 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp-~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg-~~LaSgs~Dg~ 307 (519)
.+.+|...+.+++|+| ++.+|++|+.||.|+||++...............+.+|...|.+++|+|++ ++|++|+.||.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 4556778888999999 999999999999999999986543222223445788999999999999998 69999999999
Q ss_pred EEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe--e
Q 010037 308 VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF--Q 385 (519)
Q Consensus 308 I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~ 385 (519)
|++||+.+++.. ..+ .
T Consensus 156 i~iwd~~~~~~~--------------------------------------------------------------~~~~~~ 173 (402)
T 2aq5_A 156 ILVWDVGTGAAV--------------------------------------------------------------LTLGPD 173 (402)
T ss_dssp EEEEETTTTEEE--------------------------------------------------------------EEECTT
T ss_pred EEEEECCCCCcc--------------------------------------------------------------EEEecC
Confidence 999999876542 233 5
Q ss_pred ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--cCCCc-EEEEEEeeCCCCEEEEE---eCCCeEEEEEc
Q 010037 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--SHNNY-VTSVAFNPVDDNYFISG---SIDGKVRIWEV 458 (519)
Q Consensus 386 ~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~--~h~~~-V~~v~fsp~d~~~l~sg---s~Dg~V~iwd~ 458 (519)
+|...|.+++|+|++ +|++++.|+.|++||+++++++..+ .|... +.+++|+| ++.+|++| +.|+.|++||+
T Consensus 174 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 174 VHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp TCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEET
T ss_pred CCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcC
Confidence 688999999999999 9999999999999999999999888 36665 89999999 89999999 78999999999
Q ss_pred CCCcE---EeeccCCCceEEEEEeeCCCEEEE-EecCCeEEEEECCCCe
Q 010037 459 RRCQV---VDYTDIREIVSAVCYCPDGKGGIV-GTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 459 ~~~~~---~~~~~~~~~V~~v~~spdg~~l~s-gs~dg~v~iwdl~~~~ 503 (519)
++.+. .....+...+.+++|+|++++|++ |+.||.|++||+.+++
T Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 253 KHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred ccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 98654 234467788999999999999875 5579999999999876
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=3.5e-27 Score=236.76 Aligned_cols=248 Identities=18% Similarity=0.226 Sum_probs=196.4
Q ss_pred eEeecccceeecCC----CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC----CCEEEEEeC
Q 010037 233 RIIDRHGSATLKPG----DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD----GQYLASGGE 304 (519)
Q Consensus 233 ~~~~~~~~~~~sp~----g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd----g~~LaSgs~ 304 (519)
+|...+.+++|+|+ ...+++++.++.|+||++...... ..+ .......|...|.+++|+|+ +++|++|+.
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI-RLL-QSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE-EEE-EEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE-Eee-eeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 56778888999994 566777778889999999854321 111 00111237788999999998 679999999
Q ss_pred CCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe
Q 010037 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF 384 (519)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 384 (519)
||.|++||+.+++.+..+..+...+.++.|.+.....+ +.++.++.+.+|+.... +.+..+
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l---------------~s~~~dg~i~iwd~~~~----~~~~~~ 154 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLL---------------LSVSKDHALRLWNIQTD----TLVAIF 154 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEE---------------EEEETTSCEEEEETTTT----EEEEEE
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEE---------------EEEeCCCeEEEEEeecC----eEEEEe
Confidence 99999999999999888888888888888876332222 23445667777776542 334555
Q ss_pred ---eccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-----------------------------CCCcE
Q 010037 385 ---QGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-----------------------------HNNYV 431 (519)
Q Consensus 385 ---~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-----------------------------h~~~V 431 (519)
.+|...|.+++|+|++ +|++++.|+.|++||+++++.+..+. |...|
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 234 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYV 234 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCC
T ss_pred cccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceE
Confidence 6899999999999999 99999999999999999876543322 88999
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcE--------------E-eeccCCCceEEEEEeeC--CCEEEEEecCCeE
Q 010037 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV--------------V-DYTDIREIVSAVCYCPD--GKGGIVGTMTGNC 494 (519)
Q Consensus 432 ~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~--------------~-~~~~~~~~V~~v~~spd--g~~l~sgs~dg~v 494 (519)
++++|+ +++|++++.|+.|++||+++... + .+..|...|++++|+|+ |++|++|+.||.|
T Consensus 235 ~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i 311 (366)
T 3k26_A 235 DCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 311 (366)
T ss_dssp CEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCE
T ss_pred EEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcE
Confidence 999998 56999999999999999987642 2 46678889999999999 9999999999999
Q ss_pred EEEECCCCee
Q 010037 495 RFYDIKGMQI 504 (519)
Q Consensus 495 ~iwdl~~~~l 504 (519)
++||+.+++.
T Consensus 312 ~vwd~~~~~~ 321 (366)
T 3k26_A 312 YVWDLEVEDP 321 (366)
T ss_dssp EEEECCSSSG
T ss_pred EEEECCCCCC
Confidence 9999998753
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.4e-27 Score=247.19 Aligned_cols=251 Identities=10% Similarity=0.057 Sum_probs=188.3
Q ss_pred eeEeecccceeecCC------CCeEEeeecCCeEEEeeCCcccccc----ccccccceeecCCCCEEEEEEccCCCEEEE
Q 010037 232 ARIIDRHGSATLKPG------DHELTLGQRMRRVRVHPVKKQSREL----SSLYTGQEFLAHEGSILTMKFSLDGQYLAS 301 (519)
Q Consensus 232 ~~~~~~~~~~~~sp~------g~~lasgs~dg~I~vw~~~~~~~~~----~~~~~~~~l~~H~~~I~~l~fspdg~~LaS 301 (519)
.++...+.+++|+|+ +.+||+|+.||+|+||++....... ........+.+|...|++++|++++ .|++
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las 282 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC 282 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE
Confidence 344566778999997 5799999999999999997543210 0111223678999999999999864 8999
Q ss_pred EeCCCcEEEEecccCee-eceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccc
Q 010037 302 GGEDGTVRVWKVIEHER-LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (519)
Q Consensus 302 gs~Dg~I~iWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 380 (519)
|+.||+|++||+.++.. ...+..+...+.++.+...... ....++++.++.+.+|+.+... .
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g-------------~~~laS~S~D~tvklWD~~~~~----~ 345 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE-------------DTVVSTVAVDGYFYIFNPKDIA----T 345 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS-------------CCEEEEEETTSEEEEECGGGHH----H
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC-------------CeEEEEeccCCeEEEEECCCCC----c
Confidence 99999999999987643 3345566665555532111111 0123466778899999876543 3
Q ss_pred eeEeeccCC--CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 381 LHEFQGHSS--EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 381 ~~~~~~h~~--~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
...+.+|.. .|.+++|+|++ .|++++.|++|+|||++++.++..+ .|...|++|+|+| ++.+|++|+.||+|+||
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lw 424 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIIT 424 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECC
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEE
Confidence 445566653 58999999998 9999999999999999999887666 4999999999999 99999999999999999
Q ss_pred EcCCC---------------cE------------------------------EeeccCCCceEEEEEeeCCC---EEEEE
Q 010037 457 EVRRC---------------QV------------------------------VDYTDIREIVSAVCYCPDGK---GGIVG 488 (519)
Q Consensus 457 d~~~~---------------~~------------------------------~~~~~~~~~V~~v~~spdg~---~l~sg 488 (519)
|+..+ .+ ..+.+|...|++++|+|+++ .|++|
T Consensus 425 d~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg 504 (524)
T 2j04_B 425 NAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFS 504 (524)
T ss_dssp BSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEE
T ss_pred echHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhh
Confidence 85321 01 01234667799999999964 89999
Q ss_pred ecCCeEEEEECCC
Q 010037 489 TMTGNCRFYDIKG 501 (519)
Q Consensus 489 s~dg~v~iwdl~~ 501 (519)
+.+|.|+||++..
T Consensus 505 ~~~g~vrlw~l~~ 517 (524)
T 2j04_B 505 NSAGLLTLEYLSL 517 (524)
T ss_dssp CTTSEEEEEECSC
T ss_pred ccCceEEEEEccc
Confidence 9999999999864
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.4e-27 Score=241.91 Aligned_cols=247 Identities=11% Similarity=0.079 Sum_probs=177.1
Q ss_pred CeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEE
Q 010037 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~ 309 (519)
.+..|...+.+++|+|++++|++|+.||.|+||++.... .......+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG----TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC----ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 345567788889999999999999999999999998654 1122335678999999999999999999999999999
Q ss_pred EEecccCee---eceeec-cCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccc---------
Q 010037 310 VWKVIEHER---LDGFDV-QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL--------- 376 (519)
Q Consensus 310 iWd~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--------- 376 (519)
+||+.+++. ...+.. +...+.++.+.++.. . .+.++.++.+.+|+......
T Consensus 126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~--------------l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 189 (377)
T 3dwl_C 126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV--L--------------LAAGCADRKAYVLSAYVRDVDAKPEASVW 189 (377)
T ss_dssp ECCC-----CCCCEEECSSCCSCEEEEEECTTSS--E--------------EEEEESSSCEEEEEECCSSCC-CCCSCSS
T ss_pred EEEECCcccceeeeEeecccCCCeEEEEEcCCCC--E--------------EEEEeCCCEEEEEEEEecccCCCcccccc
Confidence 999988773 455555 555666666665432 1 22334455566665432111
Q ss_pred -----cccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeE----EEEec-CCCcEEEEEEeeCCCCEEE
Q 010037 377 -----LEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRC----LRVFS-HNNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 377 -----~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~----~~~~~-h~~~V~~v~fsp~d~~~l~ 445 (519)
..+++..+ +|...|.+++|+|++ +|++++.|++|++||+.++++ +..+. |...|++++|+| ++.+|+
T Consensus 190 ~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 267 (377)
T 3dwl_C 190 GSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVA 267 (377)
T ss_dssp CSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-TTEEEE
T ss_pred ccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-CCCEEE
Confidence 12345555 899999999999999 999999999999999999876 55554 899999999999 899999
Q ss_pred EEeCCCeEEEEEcCCCc---------------------------------------EE--------------eeccCCCc
Q 010037 446 SGSIDGKVRIWEVRRCQ---------------------------------------VV--------------DYTDIREI 472 (519)
Q Consensus 446 sgs~Dg~V~iwd~~~~~---------------------------------------~~--------------~~~~~~~~ 472 (519)
+|+.++.+ +|+..... .. ....|...
T Consensus 268 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~ 346 (377)
T 3dwl_C 268 AGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNM 346 (377)
T ss_dssp EESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSC
T ss_pred EEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccce
Confidence 98866655 66654211 00 01128889
Q ss_pred eEEEEEeeCC-C---EEEEEecCCeEEEEEC
Q 010037 473 VSAVCYCPDG-K---GGIVGTMTGNCRFYDI 499 (519)
Q Consensus 473 V~~v~~spdg-~---~l~sgs~dg~v~iwdl 499 (519)
|+++++.+.. . .|++|+.||.|+|||+
T Consensus 347 i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 347 IATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred eEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 9999977654 3 5999999999999985
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.7e-26 Score=256.95 Aligned_cols=117 Identities=15% Similarity=0.167 Sum_probs=103.2
Q ss_pred ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCC---------------------------------------------
Q 010037 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGID--------------------------------------------- 419 (519)
Q Consensus 386 ~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~--------------------------------------------- 419 (519)
+|...|++++|+|++ +|++|+.|++|+|||+.++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 788999999999999 9999999999999999765
Q ss_pred eEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe------ec-cCCCceEEEEEe-----eCC---C
Q 010037 420 RCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD------YT-DIREIVSAVCYC-----PDG---K 483 (519)
Q Consensus 420 ~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~------~~-~~~~~V~~v~~s-----pdg---~ 483 (519)
+++.++. |...|++|+|+| ++ +||+|+.|++|+|||+++..++. +. +|...|++++|+ ||| +
T Consensus 566 ~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp EEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEE
T ss_pred ceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcce
Confidence 2455665 999999999999 89 99999999999999999887652 22 788899999999 886 8
Q ss_pred EEEEEecCCeEEEEEC---CCCee
Q 010037 484 GGIVGTMTGNCRFYDI---KGMQI 504 (519)
Q Consensus 484 ~l~sgs~dg~v~iwdl---~~~~l 504 (519)
+|++|+.||+|++||+ .+++.
T Consensus 644 ~l~sgs~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 644 LMVCGTDMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEEETTSEEEEEEEEECGGGCE
T ss_pred EEEEEecCCcEEEEEEecCCCCcE
Confidence 9999999999999998 55543
No 80
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=232.02 Aligned_cols=260 Identities=13% Similarity=0.170 Sum_probs=182.9
Q ss_pred CeeeEeecccceeecCC---CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCC
Q 010037 230 AMARIIDRHGSATLKPG---DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG 306 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~---g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg 306 (519)
.+..|.+.+.+++|+|+ |.+|++|+.||.|+||++...... ....+.+|.+.|.+++|+|++++|++|+.||
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT-----IPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE-----EEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce-----eEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 45667888999999999 699999999999999999852221 1135788999999999999999999999999
Q ss_pred cEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeee-------------------------eeccC
Q 010037 307 TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK-------------------------SLRKS 361 (519)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~s 361 (519)
.|++||+.+++... +..+...+.++.|.+......+........+..+. .+...
T Consensus 109 ~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp EEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEE
T ss_pred cEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEe
Confidence 99999999988765 44466667777774433332222211111110000 01111
Q ss_pred CCeeEEEeCCccccccccceeE-eeccCCCeeEEEEcCCC-----eEEEEeCCCcEEEEECCCC---eEEEEec-CCC--
Q 010037 362 SDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLSWSKNG-----FLLSSSADKTVRLWQVGID---RCLRVFS-HNN-- 429 (519)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~-----~L~sgs~Dg~V~lWdl~~~---~~~~~~~-h~~-- 429 (519)
.++.+.+|+...... .... ...+...+.++++.++. .+++++.|+.|++||++.. ..+..+. |..
T Consensus 188 ~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 188 AERGLIVYQLENQPS---EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp GGGCEEEEECSSSCE---EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred CCCcEEEEEeccccc---hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 122222222221100 0111 11233445566655544 3999999999999999987 4455554 443
Q ss_pred ----------cEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEE
Q 010037 430 ----------YVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 430 ----------~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwd 498 (519)
.|++++|+| ++++|++|+.||.|+|||+++++.+ .+..|...|++++|+|+|++|++++.|+..+.|+
T Consensus 265 ~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp ---CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred ccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 799999999 9999999999999999999998877 5677899999999999999999999988655544
Q ss_pred C
Q 010037 499 I 499 (519)
Q Consensus 499 l 499 (519)
+
T Consensus 344 ~ 344 (368)
T 3mmy_A 344 F 344 (368)
T ss_dssp G
T ss_pred c
Confidence 3
No 81
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=3.1e-26 Score=231.52 Aligned_cols=237 Identities=19% Similarity=0.227 Sum_probs=160.5
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeC------CCcEEEEecc
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE------DGTVRVWKVI 314 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~------Dg~I~iWd~~ 314 (519)
+.+.+++.++ .+..+.....|++... ...+|+..|++++|+|||++||+|+. |+.|++|+..
T Consensus 11 ~d~g~~~~~~-~~~g~~~~~~w~~p~~-----------~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~ 78 (357)
T 4g56_B 11 VDLGTENLYF-QSNGSSKGSAWGRPVT-----------APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDP 78 (357)
T ss_dssp -----------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSC
T ss_pred CCCCccceEE-ecCCCccccccCCCCC-----------CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECC
Confidence 4445555443 4445677788886521 13469999999999999999999997 7789999987
Q ss_pred cCeeecee----eccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 315 EHERLDGF----DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 315 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
++.....+ ..+...+.++.|.+.. . .+.++.++.+.+|+...............+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~V~~~~~s~d~--~---------------~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~ 141 (357)
T 4g56_B 79 EGAPNESLCTAGVQTEAGVTDVAWVSEK--G---------------ILVASDSGAVELWEILEKESLLVNKFAKYEHDDI 141 (357)
T ss_dssp C---CGGGCSEEEECSSCEEEEEEETTT--E---------------EEEEETTSCEEEC--------CCCCEEECCCSSC
T ss_pred CCCcceeEecccCCCCCCEEEEEEcCCC--C---------------EEEEECCCEEEEeeccccceeEEEeeccCCCCCC
Confidence 76543332 2344455566665542 1 1234456678888766544333334456689999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe---
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD--- 465 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~--- 465 (519)
|++++|+|++ +|++|+.|++|++||+++++++..+. |...|++++|+|....+|++++.||+|+|||+++++...
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID 221 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee
Confidence 9999999999 99999999999999999999999986 999999999999445689999999999999999987663
Q ss_pred eccCCCceEEEEEeeCC-CEEEEEecCCeEEEEECCCCeeee
Q 010037 466 YTDIREIVSAVCYCPDG-KGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 466 ~~~~~~~V~~v~~spdg-~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
...+...+++++|+|++ .+|++|+.|+.|++||+++++...
T Consensus 222 ~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~ 263 (357)
T 4g56_B 222 FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ 263 (357)
T ss_dssp CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE
T ss_pred eccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE
Confidence 44567789999999974 678899999999999999876543
No 82
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=1.4e-25 Score=225.13 Aligned_cols=204 Identities=23% Similarity=0.350 Sum_probs=165.8
Q ss_pred cceeecCCCCEEEEEE-----cc-CCCEEEEEeCCCcEEEEecccCe-------eeceeeccCCCCceEEEeecCCCCeE
Q 010037 277 GQEFLAHEGSILTMKF-----SL-DGQYLASGGEDGTVRVWKVIEHE-------RLDGFDVQDTDPSCLYFTINHLSQLI 343 (519)
Q Consensus 277 ~~~l~~H~~~I~~l~f-----sp-dg~~LaSgs~Dg~I~iWd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (519)
...+.+|.+.|++++| ++ ++++|+||+.|++|++||+.+.+ ....+..+...+.++.+.+..
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~----- 88 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN----- 88 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-----
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-----
Confidence 4568899999999999 77 89999999999999999997543 333444555555555554432
Q ss_pred EeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEE
Q 010037 344 PIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCL 422 (519)
Q Consensus 344 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~ 422 (519)
...+.++.++.+.+|+... .+.+..+.+|...|.+++|+|++ +|++++.|++|++||+......
T Consensus 89 -----------~~l~s~s~D~~v~lwd~~~----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 89 -----------CFAISSSWDKTLRLWDLRT----GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF 153 (343)
T ss_dssp -----------TEEEEEETTSEEEEEETTS----SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE
T ss_pred -----------CEEEEEcCCCcEEEEECCC----CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee
Confidence 1234566788888888765 34577889999999999999999 9999999999999999855444
Q ss_pred EEe---cCCCcEEEEEEeeCCC----------CEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEe
Q 010037 423 RVF---SHNNYVTSVAFNPVDD----------NYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 423 ~~~---~h~~~V~~v~fsp~d~----------~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs 489 (519)
... .|...|.+++|+| ++ .+|++++.|+.|++||........+..|...|++++|+|+|++|++|+
T Consensus 154 ~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp ECCTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eeecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEc
Confidence 333 4888999999999 55 799999999999999965544456788999999999999999999999
Q ss_pred cCCeEEEEECCC
Q 010037 490 MTGNCRFYDIKG 501 (519)
Q Consensus 490 ~dg~v~iwdl~~ 501 (519)
.||.|++||+.+
T Consensus 233 ~dg~v~iwd~~~ 244 (343)
T 2xzm_R 233 KDKKLLIWDILN 244 (343)
T ss_dssp TTCEEEEEESSC
T ss_pred CCCeEEEEECCC
Confidence 999999999943
No 83
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=8.6e-26 Score=222.07 Aligned_cols=208 Identities=17% Similarity=0.227 Sum_probs=166.5
Q ss_pred eeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC--eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeee
Q 010037 279 EFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH--ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (519)
Q Consensus 279 ~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (519)
.+.+|.+.|++++|+|+|++||+|+.|++|+||++... +.+..+..+...+.++.|.+..... .
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~--------------~ 69 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT--------------I 69 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCS--------------E
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCC--------------E
Confidence 46789999999999999999999999999999999743 5566677777777777765432111 2
Q ss_pred eeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCe---EEEEecCCCc
Q 010037 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDR---CLRVFSHNNY 430 (519)
Q Consensus 357 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~--~-~L~sgs~Dg~V~lWdl~~~~---~~~~~~h~~~ 430 (519)
.+.++.++.+.+|+..... ...+..+.+|...|.+++|+|+ + +|++++.|++|++||++++. ......|...
T Consensus 70 l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp EEEEETTTEEEEEEBSSSC--BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC
T ss_pred EEEEcCCCEEEEEEcCCCc--eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc
Confidence 3455667788888765321 1345667889999999999997 6 99999999999999998763 2223359999
Q ss_pred EEEEEEeeC------------CCCEEEEEeCCCeEEEEEcCCCc----EE-eeccCCCceEEEEEeeCC---CEEEEEec
Q 010037 431 VTSVAFNPV------------DDNYFISGSIDGKVRIWEVRRCQ----VV-DYTDIREIVSAVCYCPDG---KGGIVGTM 490 (519)
Q Consensus 431 V~~v~fsp~------------d~~~l~sgs~Dg~V~iwd~~~~~----~~-~~~~~~~~V~~v~~spdg---~~l~sgs~ 490 (519)
|++++|+|. ++++|++|+.|++|+|||+++++ .. .+..|...|++++|+|++ ++|++++.
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 999999993 15799999999999999998765 33 577899999999999995 89999999
Q ss_pred CCeEEEEECCCC
Q 010037 491 TGNCRFYDIKGM 502 (519)
Q Consensus 491 dg~v~iwdl~~~ 502 (519)
||.|+|||+.+.
T Consensus 228 D~~v~iWd~~~~ 239 (297)
T 2pm7_B 228 DRTCIIWTQDNE 239 (297)
T ss_dssp TSCEEEEEESST
T ss_pred CCcEEEEEeCCC
Confidence 999999999764
No 84
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=9.5e-26 Score=227.74 Aligned_cols=259 Identities=10% Similarity=0.074 Sum_probs=186.1
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVR 309 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~ 309 (519)
...|.+.+.+++|+|+|++|++|+.++ ++||+....... ...+...+..+++.++++++ ++++.|++|+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI---------MSQEMRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE---------EEEECSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee---------eeeecCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 355778889999999999999998776 789997743321 11222358888999988877 5677889999
Q ss_pred EEecccCeeeceeeccCCCCceEEEeecC-----CCCeEEeeccCC-ce-e-------------eeeeec-cCCCeeEEE
Q 010037 310 VWKVIEHERLDGFDVQDTDPSCLYFTINH-----LSQLIPIDVDKE-KI-D-------------KTKSLR-KSSDLTCVV 368 (519)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~-~-------------~~~~~~-~s~~~~~~~ 368 (519)
|||+.+++.+..+... ..+..+.+.... ...+..+..... .. . ....+. +..++.+.+
T Consensus 85 iWd~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 85 IWDDVKKQDVSRIKVD-APVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEETTTTEEEEEEECS-SCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred EEECCCCcEEEEEECC-CceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 9999999988877643 334444443221 111222222221 00 0 011112 567778888
Q ss_pred eCCccccc-----------cccc-eeEeeccCCCeeEEEEcCCC-eEEEEeCCCc-EEEEECCCCeEEEEec---CCCcE
Q 010037 369 LPPKVFRL-----------LEKP-LHEFQGHSSEVLDLSWSKNG-FLLSSSADKT-VRLWQVGIDRCLRVFS---HNNYV 431 (519)
Q Consensus 369 ~~~~~~~~-----------~~~~-~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~-V~lWdl~~~~~~~~~~---h~~~V 431 (519)
|+...... ...+ +..+.+|...|.+++|+|++ +|++|+.|++ |+|||+++++++..+. |...|
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v 243 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADV 243 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCE
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcE
Confidence 87764320 0123 67889999999999999999 9999999999 9999999999999996 99999
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe---e---------------------ccCCCceEEEEEeeCCCEEEE
Q 010037 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD---Y---------------------TDIREIVSAVCYCPDGKGGIV 487 (519)
Q Consensus 432 ~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~---~---------------------~~~~~~V~~v~~spdg~~l~s 487 (519)
++++|+| ++++|++++.|++|+|||++...... + .........++|+|||+.|++
T Consensus 244 ~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~ 322 (355)
T 3vu4_A 244 VDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVV 322 (355)
T ss_dssp EEEEECT-TSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEE
T ss_pred EEEEECC-CCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEE
Confidence 9999999 99999999999999999997653211 0 001122467899999999999
Q ss_pred EecCCeEEEEECCC
Q 010037 488 GTMTGNCRFYDIKG 501 (519)
Q Consensus 488 gs~dg~v~iwdl~~ 501 (519)
++.||.+++|++..
T Consensus 323 ~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 323 WPHTRMIETFKVVF 336 (355)
T ss_dssp ETTTTEEEEEEEEE
T ss_pred EeCCCeEEEEEEEc
Confidence 99999999999864
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=2.2e-26 Score=238.21 Aligned_cols=246 Identities=14% Similarity=0.245 Sum_probs=184.3
Q ss_pred ecccceeecCCC--CeEEeeecCCeEEEeeCCccccccc------------------cc--------------cccce-e
Q 010037 236 DRHGSATLKPGD--HELTLGQRMRRVRVHPVKKQSRELS------------------SL--------------YTGQE-F 280 (519)
Q Consensus 236 ~~~~~~~~sp~g--~~lasgs~dg~I~vw~~~~~~~~~~------------------~~--------------~~~~~-l 280 (519)
..+.+++|+|++ .+|++++.|+.|++|++........ .+ ..... +
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 678889999998 7999999999999999875332100 00 00012 3
Q ss_pred ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEeccc-Ceeece-------eeccCCCCceEEEeecCCCCeEEeeccCCce
Q 010037 281 LAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE-HERLDG-------FDVQDTDPSCLYFTINHLSQLIPIDVDKEKI 352 (519)
Q Consensus 281 ~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (519)
.+|...|++++|+|++++|++| .|+.|++||+.+ +..... +..+...+.++.|.+.....
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~----------- 241 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT----------- 241 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE-----------
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE-----------
Confidence 5799999999999999999998 799999999984 333332 33445556666665543222
Q ss_pred eeeeeeccCCCeeEEEeCCccccccccceeEeeccCC------------CeeEEEEcCCC-eEEEEeCCCcEEEEECCC-
Q 010037 353 DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS------------EVLDLSWSKNG-FLLSSSADKTVRLWQVGI- 418 (519)
Q Consensus 353 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~- 418 (519)
.+.++.++.+.+|+..........+..+.+|.. .|.+++|+|++ +|++++. +.|+|||+++
T Consensus 242 ----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 242 ----FVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME 316 (447)
T ss_dssp ----EEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC
T ss_pred ----EEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC
Confidence 234456677888887765544444677777776 99999999999 8999988 9999999997
Q ss_pred CeEEEEec-CCCc---------------EEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeec---------------
Q 010037 419 DRCLRVFS-HNNY---------------VTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT--------------- 467 (519)
Q Consensus 419 ~~~~~~~~-h~~~---------------V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~--------------- 467 (519)
++++..+. |... +..++|+| ++.+|++|+.||.|+|||+.+++.+.+.
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (447)
T 3dw8_B 317 NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPR 395 (447)
T ss_dssp SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCC
T ss_pred ccccceeeccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCc
Confidence 78777775 4321 33499999 9999999999999999999998876533
Q ss_pred ------------------cCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 468 ------------------DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 468 ------------------~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
.+...|..++|+|+|++||+++.++ +++|..+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 396 KVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 2345688999999999999998775 7788654
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.3e-25 Score=232.03 Aligned_cols=245 Identities=12% Similarity=0.081 Sum_probs=185.3
Q ss_pred ecccceeecCCCCeEEeeecCCeEEEeeCCcccc--cccccc--------------------------------------
Q 010037 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSR--ELSSLY-------------------------------------- 275 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~--~~~~~~-------------------------------------- 275 (519)
.++.+++|+|+|++|+++ .++.|++|++..+.. .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 456778999999966655 678999999876551 000000
Q ss_pred ----------ccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEecc--cCeeeceeec--cCCCCceEEEeecCCC
Q 010037 276 ----------TGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVI--EHERLDGFDV--QDTDPSCLYFTINHLS 340 (519)
Q Consensus 276 ----------~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~ 340 (519)
......+|.+.|++++|+|++++| ++|+.||.|+|||+. +++.+..+.. +...+.++.|.++...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 011123567789999999999996 899999999999998 7877777653 3344556666554321
Q ss_pred CeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCC---C-eEEEEeCCCcEEEEEC
Q 010037 341 QLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN---G-FLLSSSADKTVRLWQV 416 (519)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~---~-~L~sgs~Dg~V~lWdl 416 (519)
+ +.++.++.+..|+.........+...+.+|...|.+++|+|+ + +|++++.|++|++||+
T Consensus 164 --l--------------~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 164 --V--------------IIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp --E--------------EEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEE
T ss_pred --E--------------EEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC
Confidence 1 222335556666554433222244567889999999999999 8 9999999999999999
Q ss_pred CCCeEEEEe--cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeec--------------------------c
Q 010037 417 GIDRCLRVF--SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT--------------------------D 468 (519)
Q Consensus 417 ~~~~~~~~~--~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~--------------------------~ 468 (519)
.+++++..+ .|...|++++|+ ++.+|++|+.|++|+|||+++++++... .
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDI 305 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------C
T ss_pred CCCceeeeeecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccccc
Confidence 999888774 499999999999 8999999999999999999998876422 2
Q ss_pred CCCceEEEEEeeCCCEEEEEe-cCCeEEEEEC
Q 010037 469 IREIVSAVCYCPDGKGGIVGT-MTGNCRFYDI 499 (519)
Q Consensus 469 ~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl 499 (519)
....|.+++|+|++++|++++ .++.|+||++
T Consensus 306 ~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 306 IEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp BCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred ceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 235689999999999999999 8999999999
No 87
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5e-26 Score=256.78 Aligned_cols=204 Identities=13% Similarity=0.127 Sum_probs=170.3
Q ss_pred CeeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEE
Q 010037 230 AMARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVR 309 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~ 309 (519)
...+|...+.+++|+|++.+||+|+.||.|+||+....... ....|..+|.+|+|+| |++|++++.|++|+
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~--------~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~ 82 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV--------IKLEDRSAIKEMRFVK-GIYLVVINAKDTVY 82 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE--------EECSSCCCEEEEEEET-TTEEEEEETTCEEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE--------EEcCCCCCEEEEEEcC-CCEEEEEECcCeEE
Confidence 34466778889999999999999999999999997643221 1234788999999999 88999999999999
Q ss_pred EEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCC
Q 010037 310 VWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (519)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (519)
|||+.+++++. .+. |..
T Consensus 83 lWd~~~~~~~~--------------------------------------------------------------~~~-~~~ 99 (902)
T 2oaj_A 83 VLSLYSQKVLT--------------------------------------------------------------TVF-VPG 99 (902)
T ss_dssp EEETTTCSEEE--------------------------------------------------------------EEE-CSS
T ss_pred EEECCCCcEEE--------------------------------------------------------------EEc-CCC
Confidence 99998765321 222 557
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEE-----------Ee-cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLR-----------VF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 390 ~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~-----------~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
.|++++|+|++ +|++|+.||+|++||+.++++.. .+ .|...|++|+|+|.++.+|++|+.||.| +|
T Consensus 100 ~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lW 178 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TY 178 (902)
T ss_dssp CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EE
T ss_pred CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EE
Confidence 89999999999 99999999999999999987641 11 2888999999999546799999999999 99
Q ss_pred EcCCCcEEe-eccC------------------CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 457 EVRRCQVVD-YTDI------------------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 457 d~~~~~~~~-~~~~------------------~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
|+++++.+. +..+ ...|++++|+|+|++|++|+.||.|++||+++++++.
T Consensus 179 d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 179 SLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp ETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred ECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 999988774 3322 4679999999999999999999999999999887654
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=3e-25 Score=230.06 Aligned_cols=227 Identities=21% Similarity=0.396 Sum_probs=187.5
Q ss_pred eecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeece
Q 010037 242 TLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDG 321 (519)
Q Consensus 242 ~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~ 321 (519)
++.++++++++|+.||.|++|+..... ....+.+|.+.|.+++| ++++|++|+.||.|++||+.+++....
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLE-------CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCC-------EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCe-------EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 566699999999999999999987543 23457899999999999 788999999999999999999998887
Q ss_pred eeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-
Q 010037 322 FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG- 400 (519)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~- 400 (519)
+..+...+.++.+.. . ..+.++.++.+.+|+....... .....+.+|...|.+++| ++
T Consensus 209 ~~~h~~~v~~l~~~~---~---------------~l~s~s~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~--~~~ 267 (435)
T 1p22_A 209 LIHHCEAVLHLRFNN---G---------------MMVTCSKDRSIAVWDMASPTDI-TLRRVLVGHRAAVNVVDF--DDK 267 (435)
T ss_dssp ECCCCSCEEEEECCT---T---------------EEEEEETTSCEEEEECSSSSCC-EEEEEECCCSSCEEEEEE--ETT
T ss_pred EcCCCCcEEEEEEcC---C---------------EEEEeeCCCcEEEEeCCCCCCc-eeeeEecCCCCcEEEEEe--CCC
Confidence 776665555554421 1 2345556777777776543211 123567889999999999 44
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEE
Q 010037 401 FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCY 478 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~ 478 (519)
+|++|+.|++|++||+++++++..+. |...|.+++|+ ++++++|+.||.|++||+++++.+ .+..|...|++++|
T Consensus 268 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 268 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 344 (435)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe
Confidence 99999999999999999999998887 99999999994 579999999999999999998877 57779999999999
Q ss_pred eeCCCEEEEEecCCeEEEEECCCCe
Q 010037 479 CPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 479 spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
++++|++|+.||.|++||+.+++
T Consensus 345 --~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 345 --DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp --CSSEEEEEETTSCEEEEEHHHHT
T ss_pred --cCCEEEEEeCCCcEEEEECCCCC
Confidence 78899999999999999987554
No 89
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=1.6e-25 Score=229.44 Aligned_cols=205 Identities=22% Similarity=0.347 Sum_probs=173.1
Q ss_pred ceeecCCCCeEE-eeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEecccCe
Q 010037 240 SATLKPGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 240 ~~~~sp~g~~la-sgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~LaSgs~Dg~I~iWd~~~~~ 317 (519)
.++++|+...++ +|+.+|.|+||++....... .....+.+|.+.|++++|+| ++++|++|+.||.|+||++.++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVD---KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECC---TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCC---CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 367888876554 47899999999997543321 12335688999999999999 99999999999999999998765
Q ss_pred eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEc
Q 010037 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 397 (519)
..... ..++..+.+|...|.+++|+
T Consensus 116 ~~~~~-------------------------------------------------------~~~~~~~~~h~~~v~~~~~~ 140 (402)
T 2aq5_A 116 LVLPL-------------------------------------------------------REPVITLEGHTKRVGIVAWH 140 (402)
T ss_dssp CSSCB-------------------------------------------------------CSCSEEEECCSSCEEEEEEC
T ss_pred Ccccc-------------------------------------------------------CCceEEecCCCCeEEEEEEC
Confidence 32110 13456778999999999999
Q ss_pred CCC--eEEEEeCCCcEEEEECCCCeEEEEe--c-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-e-ccCC
Q 010037 398 KNG--FLLSSSADKTVRLWQVGIDRCLRVF--S-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-Y-TDIR 470 (519)
Q Consensus 398 p~~--~L~sgs~Dg~V~lWdl~~~~~~~~~--~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~-~~~~ 470 (519)
|++ +|++++.|++|++||+.+++++..+ . |...|++++|+| ++.+|++++.||.|++||+++++.+. + ..|.
T Consensus 141 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 219 (402)
T 2aq5_A 141 PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE 219 (402)
T ss_dssp SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCC
Confidence 996 8999999999999999999999988 4 999999999999 99999999999999999999998874 3 4666
Q ss_pred Cc-eEEEEEeeCCCEEEEE---ecCCeEEEEECCCCe
Q 010037 471 EI-VSAVCYCPDGKGGIVG---TMTGNCRFYDIKGMQ 503 (519)
Q Consensus 471 ~~-V~~v~~spdg~~l~sg---s~dg~v~iwdl~~~~ 503 (519)
.. +..++|+|+|++|++| +.||.|++||+.+++
T Consensus 220 ~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 220 GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 55 8999999999999999 789999999998754
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=6e-25 Score=218.48 Aligned_cols=224 Identities=20% Similarity=0.302 Sum_probs=171.9
Q ss_pred ceeecCCCCEEEEEEccC-CCEEEEEeCCCcEEEEecccCe-----eeceeeccCCCCceEEEeecCCCCeE--------
Q 010037 278 QEFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWKVIEHE-----RLDGFDVQDTDPSCLYFTINHLSQLI-------- 343 (519)
Q Consensus 278 ~~l~~H~~~I~~l~fspd-g~~LaSgs~Dg~I~iWd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 343 (519)
.+|+||.+.|++|+|+|+ +++||||+.||+|+|||+.+.+ ....+..+...+.++.|.++....+.
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence 468999999999999997 6899999999999999997654 34455666777777777665432111
Q ss_pred EeeccCCcee------------------eeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC---eE
Q 010037 344 PIDVDKEKID------------------KTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG---FL 402 (519)
Q Consensus 344 ~~~~~~~~~~------------------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~---~L 402 (519)
.+........ ....+.++.++.+.+|+..... .....+.+|...+.+++|++++ ++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 112 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC---KYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE---EEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc---eEEEEeccccCcccceEEccCCCCcEE
Confidence 1111111100 0111334455566666553321 2234456799999999999875 78
Q ss_pred EEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeC
Q 010037 403 LSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPD 481 (519)
Q Consensus 403 ~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spd 481 (519)
++++.|++|++||+++++++..+. |...|++++|+| ++++|++|+.||.|++||+++.+.+....+...|.+++|+|+
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 267 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN 267 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred EEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCC
Confidence 899999999999999999998886 999999999999 999999999999999999999999877777889999999999
Q ss_pred CCEEEEEecCCeEEEEECCCCeeee
Q 010037 482 GKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 482 g~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+. +++++.|+.|++||++++.+..
T Consensus 268 ~~-~~~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 268 RY-WLCAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp SS-EEEEEETTEEEEEETTTTEEEE
T ss_pred Cc-eeeccCCCEEEEEECCCCeEEE
Confidence 86 4566679999999999877654
No 91
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.8e-26 Score=233.97 Aligned_cols=242 Identities=13% Similarity=0.090 Sum_probs=166.6
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc--------CCCEEEEEeCCCcEEEE
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--------DGQYLASGGEDGTVRVW 311 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--------dg~~LaSgs~Dg~I~iW 311 (519)
...+.+++.+||+|+.|++|+||+........ ......+.+|.+.|++|+|+| |+++||||+.|++|+||
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~--~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIIT--QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEE--EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccce--eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 35678888999999999999999987654321 122234679999999999998 88999999999999999
Q ss_pred ecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc-------------
Q 010037 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE------------- 378 (519)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~------------- 378 (519)
|+.++.....+..+...+.++.|.+.....+ +.++.++.+.+|+........
T Consensus 172 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l---------------~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 172 RLTDEGPILAGYPLSSPGISVQFRPSNPNQL---------------IVGERNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp EEETTEEEEEEEECSSCEEEEEEETTEEEEE---------------EEEETTSEEEEEETTCCC----------CSCCCS
T ss_pred ECCCCceeeeecCCCCCcEEEEECCCCCceE---------------EecCCCCEEEEEECCCCcccccccccCCcccceE
Confidence 9998888777777777777888776543322 234445555555543322110
Q ss_pred --------cceeEeeccCCCeeEEEEc-CCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEE--------------
Q 010037 379 --------KPLHEFQGHSSEVLDLSWS-KNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTS-------------- 433 (519)
Q Consensus 379 --------~~~~~~~~h~~~V~~l~~s-p~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~-------------- 433 (519)
.......+|...|.++.|+ |++ .|++++.|+++++||+.+++....+. |...+..
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSC
T ss_pred EecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC
Confidence 1122345788999999997 677 99999999999999998877655543 3333333
Q ss_pred ----EEEeeC-CCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 434 ----VAFNPV-DDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 434 ----v~fsp~-d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
..|+|. ++.++++|+.||+|+|||+.+++.+ ....|...|++++|+|||++||+++.+| +.+|.+
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 233332 3446677889999999999988766 4677888999999999999999998765 566655
No 92
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=2e-24 Score=224.32 Aligned_cols=237 Identities=21% Similarity=0.361 Sum_probs=195.3
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+.+|.+.+.. ++++++++|++|+.||.|++|++..... ...+.+|.+.|+++.|+ +++|++|+.||+|++
T Consensus 114 l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~-------~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 114 LKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKC-------LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp EECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCE-------EEECCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred ecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcE-------EEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 4455554432 5777899999999999999999875442 24577899999999997 669999999999999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
||+.+++....+..+...+.++.+.. ...+.++.++.+.+|+... .+.+..+.+|...
T Consensus 184 wd~~~~~~~~~~~~h~~~v~~~~~~~------------------~~l~s~s~dg~i~~wd~~~----~~~~~~~~~~~~~ 241 (445)
T 2ovr_B 184 WNAETGECIHTLYGHTSTVRCMHLHE------------------KRVVSGSRDATLRVWDIET----GQCLHVLMGHVAA 241 (445)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEET------------------TEEEEEETTSEEEEEESSS----CCEEEEEECCSSC
T ss_pred EECCcCcEEEEECCCCCcEEEEEecC------------------CEEEEEeCCCEEEEEECCC----CcEEEEEcCCccc
Confidence 99999998888877766666655521 1134556677888887664 3557788899999
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eec
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYT 467 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~ 467 (519)
|.+++| ++ +|++++.|+.|++||+++++++..+. |...|++++| ++.++++|+.||.|++||+++++.+ .+.
T Consensus 242 v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 242 VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEc
Confidence 999999 45 99999999999999999999999886 8999999999 6789999999999999999999877 467
Q ss_pred cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 468 DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 468 ~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.|...+.++.+ ++++|++|+.||.|++||+.+++...
T Consensus 317 ~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~ 353 (445)
T 2ovr_B 317 GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQ 353 (445)
T ss_dssp CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 78888887776 57799999999999999998876543
No 93
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1e-24 Score=234.78 Aligned_cols=250 Identities=17% Similarity=0.257 Sum_probs=201.8
Q ss_pred eeEeec-ccceeecC--CCCeEEeeecCCeEEEeeCCccccc-cccccccceeecCCCCEEEEEEccCCCEEEEEeCC--
Q 010037 232 ARIIDR-HGSATLKP--GDHELTLGQRMRRVRVHPVKKQSRE-LSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED-- 305 (519)
Q Consensus 232 ~~~~~~-~~~~~~sp--~g~~lasgs~dg~I~vw~~~~~~~~-~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D-- 305 (519)
..|... +.+++|+| ++++|++|+.||.|+||++...... .........+.+|..+|.+++|+|++++|++++.+
T Consensus 60 ~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 139 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 139 (615)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS
T ss_pred ecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC
Confidence 445566 78899999 9999999999999999999643100 00112234677899999999999999999999988
Q ss_pred --CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 306 --GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 306 --g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
+.|++|| .++....+..+...+.++.|.+.....+ +.++.++.+.+|+.... +.+..
T Consensus 140 ~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l---------------~~~~~d~~v~vwd~~~~----~~~~~ 198 (615)
T 1pgu_A 140 NFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRS---------------MTVGDDGSVVFYQGPPF----KFSAS 198 (615)
T ss_dssp CSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEE---------------EEEETTTEEEEEETTTB----EEEEE
T ss_pred CccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEE---------------EEEeCCCcEEEEeCCCc----ceeee
Confidence 6888888 5666667777777777777766553222 33455667777775543 44677
Q ss_pred eeccCC---CeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEe-----cCCCcEEEEEEeeCCCCEEEEEeCCCeE
Q 010037 384 FQGHSS---EVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVF-----SHNNYVTSVAFNPVDDNYFISGSIDGKV 453 (519)
Q Consensus 384 ~~~h~~---~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~-----~h~~~V~~v~fsp~d~~~l~sgs~Dg~V 453 (519)
+.+|.. .|.+++|+|+ + +|++++.|+.|++||+.+++++..+ .|...|++++|+ ++.+|++++.|+.|
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i 276 (615)
T 1pgu_A 199 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATI 276 (615)
T ss_dssp ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEE
T ss_pred ecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcE
Confidence 888999 9999999999 8 9999999999999999999999999 799999999999 78999999999999
Q ss_pred EEEEcCCCcEEe-eccC----CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 454 RIWEVRRCQVVD-YTDI----REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 454 ~iwd~~~~~~~~-~~~~----~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
++||+++++.+. +..+ ...+.++.|. +++++++++.||.|++||+.+++..
T Consensus 277 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 277 RVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVL 332 (615)
T ss_dssp EEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEE
Confidence 999999988774 3333 3678888885 8999999999999999999876554
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=1.7e-25 Score=222.02 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=161.0
Q ss_pred eeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe--eeceeeccCCCCceEEEeecC-CCCeEEeeccCCceeee
Q 010037 279 EFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE--RLDGFDVQDTDPSCLYFTINH-LSQLIPIDVDKEKIDKT 355 (519)
Q Consensus 279 ~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 355 (519)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++. .+..+..+...+.++.|.+.. ...
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~-------------- 73 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNI-------------- 73 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSC--------------
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCE--------------
Confidence 457899999999999999999999999999999998775 345666777777777765431 222
Q ss_pred eeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeEE---EEe-cCC
Q 010037 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRCL---RVF-SHN 428 (519)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~--~-~L~sgs~Dg~V~lWdl~~~~~~---~~~-~h~ 428 (519)
.+.++.++.+.+|+..... ......+.+|...|.+++|+|+ + +|++|+.|++|++||++.+... ..+ .|.
T Consensus 74 -l~s~s~D~~v~iWd~~~~~--~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~ 150 (316)
T 3bg1_A 74 -LASCSYDRKVIIWREENGT--WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT 150 (316)
T ss_dssp -EEEEETTSCEEEECCSSSC--CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS
T ss_pred -EEEEECCCEEEEEECCCCc--ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc
Confidence 2345667788888875421 1345677899999999999997 6 8999999999999999876322 222 388
Q ss_pred CcEEEEEEeeCC-----------------CCEEEEEeCCCeEEEEEcCCC---cEE-eeccCCCceEEEEEeeCC----C
Q 010037 429 NYVTSVAFNPVD-----------------DNYFISGSIDGKVRIWEVRRC---QVV-DYTDIREIVSAVCYCPDG----K 483 (519)
Q Consensus 429 ~~V~~v~fsp~d-----------------~~~l~sgs~Dg~V~iwd~~~~---~~~-~~~~~~~~V~~v~~spdg----~ 483 (519)
..|++++|+| + +.+|++|+.|++|+|||++.. +.+ .+..|...|++++|+|++ +
T Consensus 151 ~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 151 IGCNAVSWAP-AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp SCBCCCEECC-CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC
T ss_pred CCcceEEEcc-ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc
Confidence 8999999999 5 478999999999999999864 233 577899999999999987 8
Q ss_pred EEEEEecCCeEEEEECCC
Q 010037 484 GGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 484 ~l~sgs~dg~v~iwdl~~ 501 (519)
+|++|+.||+|+||++.+
T Consensus 230 ~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EEEEEETTCEEEEEECSS
T ss_pred eEEEEcCCCeEEEEEccC
Confidence 899999999999999876
No 95
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.3e-25 Score=230.41 Aligned_cols=244 Identities=9% Similarity=0.153 Sum_probs=188.2
Q ss_pred eEeecccceeecCCCCeEEeeecCCeEEEeeCCc---ccccc-ccccccceee--c--CCCCEEEEE--EccCCCEEEEE
Q 010037 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKK---QSREL-SSLYTGQEFL--A--HEGSILTMK--FSLDGQYLASG 302 (519)
Q Consensus 233 ~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~---~~~~~-~~~~~~~~l~--~--H~~~I~~l~--fspdg~~LaSg 302 (519)
.|...+.+++|+|++.+|++|+.||.|++|++.. ..... ........+. . |...+.++. +++++.+|++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 3567788899999999999999999999999852 11110 0001111121 2 567788888 56889999999
Q ss_pred eCCCcEEEEecccCeeeceeec--cCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccc
Q 010037 303 GEDGTVRVWKVIEHERLDGFDV--QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (519)
Q Consensus 303 s~Dg~I~iWd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 380 (519)
+.||.|++||+.+++.+..+.. +...+.++.+.+... ..+.++.++.+.+|+.+. .++
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~----------------~l~s~~~dg~i~iwd~~~----~~~ 248 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC----------------VLILGTTRGIIDIWDIRF----NVL 248 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC----------------EEEEEETTSCEEEEETTT----TEE
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC----------------EEEEEcCCCeEEEEEcCC----ccE
Confidence 9999999999999998888876 566666776655421 223456677788887764 344
Q ss_pred eeEee-ccCCCeeEEEEcC----CC-eEEEEeCCCcEEEEECCCCeEEEEec---------------------------C
Q 010037 381 LHEFQ-GHSSEVLDLSWSK----NG-FLLSSSADKTVRLWQVGIDRCLRVFS---------------------------H 427 (519)
Q Consensus 381 ~~~~~-~h~~~V~~l~~sp----~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~---------------------------h 427 (519)
+..+. .|...|.+++|+| ++ +|++++.|++|++||+++++++..+. |
T Consensus 249 ~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (437)
T 3gre_A 249 IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRS 328 (437)
T ss_dssp EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCS
T ss_pred EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccccc
Confidence 56665 7888999996665 56 99999999999999999999888775 5
Q ss_pred CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-ecc-------------------------------------C
Q 010037 428 NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTD-------------------------------------I 469 (519)
Q Consensus 428 ~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~~-------------------------------------~ 469 (519)
...|++++|++ +++|++|+.|+.|++||+.+++... +.. |
T Consensus 329 ~~~v~~l~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 406 (437)
T 3gre_A 329 LNALSTISVSN--DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYH 406 (437)
T ss_dssp GGGGCCEEEET--TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------
T ss_pred CCceEEEEECC--ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCccccc
Confidence 56688999984 6899999999999999999876442 222 8
Q ss_pred CCceEEEEEeeC--CCEEEEEecCCeEEEEE
Q 010037 470 REIVSAVCYCPD--GKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 470 ~~~V~~v~~spd--g~~l~sgs~dg~v~iwd 498 (519)
...|++++|+++ +.+|++|+.||.|+||+
T Consensus 407 ~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 407 HDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 899999999998 78999999999999995
No 96
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3e-25 Score=222.62 Aligned_cols=201 Identities=12% Similarity=0.081 Sum_probs=155.6
Q ss_pred ecccceeecCCCCeEEeeecCCeEEEeeCCccccc--ccccccccee-ecCCCCEEEEEEcc--CCCEEEEEeCCCcEEE
Q 010037 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE--LSSLYTGQEF-LAHEGSILTMKFSL--DGQYLASGGEDGTVRV 310 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~--~~~~~~~~~l-~~H~~~I~~l~fsp--dg~~LaSgs~Dg~I~i 310 (519)
..+.++.++|+ +++|+.|++|++|+....... .......+.+ .+|.+.|.+++|+| ++++|++|+.||+|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 55667889998 999999999999988743211 1111111122 26778999999999 9999999999999999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
||+.+++..... ...|...
T Consensus 154 wd~~~~~~~~~~-------------------------------------------------------------~~~~~~~ 172 (343)
T 3lrv_A 154 QSYEDDSQYIVH-------------------------------------------------------------SAKSDVE 172 (343)
T ss_dssp EESSSSCEEEEE-------------------------------------------------------------CCCSSCC
T ss_pred EECCCCcEEEEE-------------------------------------------------------------ecCCCCc
Confidence 999877642111 1224557
Q ss_pred eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEE-EEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-
Q 010037 391 VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCL-RVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD- 465 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~-~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~- 465 (519)
|.+++|+|++ +|++|+.|+.|+|||+++++.+ ..+. |...|++++|+| ++.+|++++ |+.|+|||+++.+.+.
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCccee
Confidence 9999999999 9999999999999999999877 5564 899999999999 999999999 5599999999886652
Q ss_pred ec---cCCCce--EEEEEeeCCCEEEEEec-CCeEEEEECCCC
Q 010037 466 YT---DIREIV--SAVCYCPDGKGGIVGTM-TGNCRFYDIKGM 502 (519)
Q Consensus 466 ~~---~~~~~V--~~v~~spdg~~l~sgs~-dg~v~iwdl~~~ 502 (519)
+. .+...+ .+++|+|+|++|++++. |+.|+||++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 251 YPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp SCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 21 122333 46999999999999998 999999998543
No 97
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=8.2e-25 Score=221.82 Aligned_cols=202 Identities=13% Similarity=0.147 Sum_probs=148.9
Q ss_pred ccceeecCCCCeEEe--eecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q 010037 238 HGSATLKPGDHELTL--GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (519)
Q Consensus 238 ~~~~~~sp~g~~las--gs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~ 315 (519)
+.+++|+|||+++++ ++.|++|+|||+...... ..+ .|.+.|++|+|+|||++|++++.| .+++|+..+
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~-------~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~ 206 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK-------FEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVT 206 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE-------EEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE-------EEe-CCCCceEEEEEccCCceEEeccce-eEEEEEecc
Confidence 456899999999865 557899999998854432 223 478899999999999999999865 566777766
Q ss_pred Ceeecee--eccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeE
Q 010037 316 HERLDGF--DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLD 393 (519)
Q Consensus 316 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 393 (519)
+...... ..+...+..+.|.++....+.. ..+ ......+..|+.............+.+|...|++
T Consensus 207 ~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~-s~d-----------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~ 274 (365)
T 4h5i_A 207 GSCIARKTDFDKNWSLSKINFIADDTVLIAA-SLK-----------KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITS 274 (365)
T ss_dssp CCEEEEECCCCTTEEEEEEEEEETTEEEEEE-EES-----------SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEE
T ss_pred CcceeeeecCCCCCCEEEEEEcCCCCEEEEE-ecC-----------CcceeEEeecccccceecceeeeeecCCCCCeEe
Confidence 6654332 2233345566666654322221 111 1112233444433322222335667889999999
Q ss_pred EEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-c-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC
Q 010037 394 LSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-S-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (519)
Q Consensus 394 l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~ 461 (519)
++|+|+| +|++|+.|++|+|||+.+++++..+ . |...|++|+|+| ++++||+||.|++|+|||+...
T Consensus 275 ~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 275 MDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999 9999999999999999999999886 3 999999999999 9999999999999999999653
No 98
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=7.2e-25 Score=215.50 Aligned_cols=177 Identities=12% Similarity=0.134 Sum_probs=130.7
Q ss_pred cCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc---CCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCce
Q 010037 255 RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL---DGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSC 331 (519)
Q Consensus 255 ~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp---dg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~ 331 (519)
.|+.|++|++....+. ...+.+|...+..++|++ ++.+||+|+.|++|+|||+.+++++..+..+..
T Consensus 155 ~d~~V~~~~~s~dG~~------~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~---- 224 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGG------KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS---- 224 (356)
T ss_dssp TTCEEEEEEECTTSCE------EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----
T ss_pred CCCcEEEEEECCCCce------eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc----
Confidence 4788888887432211 124568888899999999 779999999999999999999987666542211
Q ss_pred EEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-e---------
Q 010037 332 LYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-F--------- 401 (519)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~--------- 401 (519)
|...+.+++|+|++ +
T Consensus 225 -------------------------------------------------------~v~~v~~vafSpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 225 -------------------------------------------------------YQASVCHKAYSEMGLLFIVLSHPCA 249 (356)
T ss_dssp ---------------------------------------------------------CCCEEEEEEETTEEEEEEC----
T ss_pred -------------------------------------------------------ceeeeEEEEECCCCCEEEEeccCCC
Confidence 11245555666665 3
Q ss_pred ---EEEEeCCCcEEEEECCCCeEEEEe------cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-eccCCC
Q 010037 402 ---LLSSSADKTVRLWQVGIDRCLRVF------SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDIRE 471 (519)
Q Consensus 402 ---L~sgs~Dg~V~lWdl~~~~~~~~~------~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~~~~~ 471 (519)
+++|+.|++|++||..+++++.++ .|...+.+..+ ++.++++|+.|++|+|||+.+++++. +.+|..
T Consensus 250 ~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~ 326 (356)
T 2w18_A 250 KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSD 326 (356)
T ss_dssp --------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--
T ss_pred cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCC
Confidence 477899999999999999988776 25444444333 47899999999999999999999885 556766
Q ss_pred ceE-EEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 472 IVS-AVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 472 ~V~-~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
.+. .++|+|||++|++|+.|++|+|||+
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 554 6899999999999999999999995
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.2e-24 Score=216.69 Aligned_cols=233 Identities=12% Similarity=0.060 Sum_probs=185.6
Q ss_pred eEeecccceeecCCCC-eEEeeecCCeEEEeeC-Cccccccccccccceeec--CCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 233 RIIDRHGSATLKPGDH-ELTLGQRMRRVRVHPV-KKQSRELSSLYTGQEFLA--HEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 233 ~~~~~~~~~~~sp~g~-~lasgs~dg~I~vw~~-~~~~~~~~~~~~~~~l~~--H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
.|...+.+++|+|++. +|++|+.||.|++|++ ..... ..+.+ |...|.+++|+| +++|++++.|+.|
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~--------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i 124 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF--------QALTNNEANLGICRICKYG-DDKLIAASWDGLI 124 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE--------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce--------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeE
Confidence 5566778899999999 9999999999999998 65432 35677 999999999999 9999999999999
Q ss_pred EEEeccc---------CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcc-ccccc
Q 010037 309 RVWKVIE---------HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV-FRLLE 378 (519)
Q Consensus 309 ~iWd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~ 378 (519)
++||+.+ ++.+..+. +...+.++.+.+.. .+.++.++.+.+|+... ...
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~------------------l~~~~~d~~i~i~d~~~~~~~-- 183 (342)
T 1yfq_A 125 EVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR------------------LIVGMNNSQVQWFRLPLCEDD-- 183 (342)
T ss_dssp EEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE------------------EEEEESTTEEEEEESSCCTTC--
T ss_pred EEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc------------------EEEEeCCCeEEEEECCccccc--
Confidence 9999987 66555554 34444444443221 23345566677776654 221
Q ss_pred cceeEeeccCCCeeEEEEcC-CC-eEEEEeCCCcEEEEECCCC------eEEEEec-CCC---------cEEEEEEeeCC
Q 010037 379 KPLHEFQGHSSEVLDLSWSK-NG-FLLSSSADKTVRLWQVGID------RCLRVFS-HNN---------YVTSVAFNPVD 440 (519)
Q Consensus 379 ~~~~~~~~h~~~V~~l~~sp-~~-~L~sgs~Dg~V~lWdl~~~------~~~~~~~-h~~---------~V~~v~fsp~d 440 (519)
........|...|.+++|+| ++ +|++++.|+.|++|++... +.+..+. |.. .|++++|+| +
T Consensus 184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~ 262 (342)
T 1yfq_A 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-R 262 (342)
T ss_dssp CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-T
T ss_pred cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-C
Confidence 12334456888999999999 88 9999999999999999876 6666665 544 999999999 9
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcEE-eeccC-CCceEEEEEeeCCCEEEEEecCCe-EEEEE
Q 010037 441 DNYFISGSIDGKVRIWEVRRCQVV-DYTDI-REIVSAVCYCPDGKGGIVGTMTGN-CRFYD 498 (519)
Q Consensus 441 ~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~-~~~V~~v~~spdg~~l~sgs~dg~-v~iwd 498 (519)
+++|++|+.||.|++||+.+++.+ .+..| ...|++++ |+|++|++++.||. .+.|.
T Consensus 263 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 263 HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp TCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred CCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 999999999999999999999877 46667 89999999 99999999999998 55444
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=2.4e-24 Score=240.33 Aligned_cols=245 Identities=19% Similarity=0.279 Sum_probs=199.6
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+..|...+.+++|+|++++|++|+.||.|+||++.... ....+.+|.+.|++++|+|++++|++++.||.|++
T Consensus 51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 123 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE-------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL 123 (814)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-------EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE
Confidence 34456678889999999999999999999999987543 23457889999999999999999999999999999
Q ss_pred EecccC-eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeecc-C
Q 010037 311 WKVIEH-ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH-S 388 (519)
Q Consensus 311 Wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h-~ 388 (519)
|++.++ .....+..+...+.++.|.+.... ..+.++.++.+.+|+... ..+...+..| .
T Consensus 124 w~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~---------------~l~~~~~dg~v~vwd~~~----~~~~~~~~~~~~ 184 (814)
T 3mkq_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPS---------------TFASGCLDRTVKVWSLGQ----STPNFTLTTGQE 184 (814)
T ss_dssp EEGGGTSEEEEEEECCSSCEEEEEEETTEEE---------------EEEEEETTSEEEEEETTC----SSCSEEEECCCT
T ss_pred EECCCCceEEEEEcCCCCcEEEEEEEcCCCC---------------EEEEEeCCCeEEEEECCC----CcceeEEecCCC
Confidence 999887 566666667777777777652211 223455566777777643 2334445544 4
Q ss_pred CCeeEEEEcC--CC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE
Q 010037 389 SEVLDLSWSK--NG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (519)
Q Consensus 389 ~~V~~l~~sp--~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~ 464 (519)
..+.+++|+| ++ +|++++.|+.|++||+.+++++..+. |...|++++|+| ++.+|++++.||.|++||+.+++.+
T Consensus 185 ~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 8999999999 77 99999999999999999999998887 899999999999 9999999999999999999998877
Q ss_pred -eeccCCCceEEEEEeeCCCE-EEEEecCCeEEEEECCCC
Q 010037 465 -DYTDIREIVSAVCYCPDGKG-GIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 465 -~~~~~~~~V~~v~~spdg~~-l~sgs~dg~v~iwdl~~~ 502 (519)
.+..+...+.+++|+|+|.. +++++.++.+.+|++...
T Consensus 264 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 264 KTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred EEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 46777889999999999974 355555778899998643
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=1.4e-24 Score=224.90 Aligned_cols=234 Identities=19% Similarity=0.341 Sum_probs=183.4
Q ss_pred eEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEe
Q 010037 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (519)
Q Consensus 233 ~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd 312 (519)
+|...+.+++| ++.+|++|+.||.|++|++..... ...+.+|...|.+++|+ +.+|++|+.||.|++||
T Consensus 171 ~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~-------~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 171 GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM-------LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWD 239 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE-------EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE-------EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEe
Confidence 45556666666 889999999999999999985442 34577899999999997 45999999999999999
Q ss_pred cccCeee---ceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCC
Q 010037 313 VIEHERL---DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (519)
Q Consensus 313 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (519)
+.++... ..+..+...+.++.+ . ....+.++.++.+.+|+... .+.+..+.+|..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~-------------~-----~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~ 297 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDF-------------D-----DKYIVSASGDRTIKVWNTST----CEFVRTLNGHKR 297 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEE-------------E-----TTEEEEEETTSEEEEEETTT----CCEEEEEECCSS
T ss_pred CCCCCCceeeeEecCCCCcEEEEEe-------------C-----CCEEEEEeCCCeEEEEECCc----CcEEEEEcCCCC
Confidence 9887654 233333333333333 1 11234556678888888765 355778899999
Q ss_pred CeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc------
Q 010037 390 EVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ------ 462 (519)
Q Consensus 390 ~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~------ 462 (519)
.|.+++|++ .+|++|+.|++|++||+++++++..+. |...|++++| ++.+|++|+.||.|++||++++.
T Consensus 298 ~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 373 (435)
T 1p22_A 298 GIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPA 373 (435)
T ss_dssp CEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCT
T ss_pred cEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccc
Confidence 999999953 399999999999999999999999887 9999999999 57899999999999999997654
Q ss_pred ---EE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 463 ---VV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 463 ---~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
.+ .+..|...|++++| ++++|++|+.||.|++||+.+....
T Consensus 374 ~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 374 GTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp TTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred cchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 44 57889999999999 7889999999999999999876543
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=2e-24 Score=252.23 Aligned_cols=264 Identities=16% Similarity=0.231 Sum_probs=201.8
Q ss_pred eeeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc--CCCEEEEEeCCCcE
Q 010037 231 MARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL--DGQYLASGGEDGTV 308 (519)
Q Consensus 231 ~~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp--dg~~LaSgs~Dg~I 308 (519)
+.+|...+.+++|+|++++|++|+.||.|+||++..+. ....+.+|...|.+++|+| ++.++++|+.||.|
T Consensus 653 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK-------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc-------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeE
Confidence 44567788889999999999999999999999988543 2346789999999999999 55699999999999
Q ss_pred EEEecccCeeeceeeccCCCCceEEEeecCCCC--------eEEeeccCCceeeeee---------------------e-
Q 010037 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQ--------LIPIDVDKEKIDKTKS---------------------L- 358 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~---------------------~- 358 (519)
++||+.++++...+..+...+.++.+.++.... +..+............ +
T Consensus 726 ~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp EEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred EEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 999999999998888888888888887754321 1112211111100000 0
Q ss_pred --------ccCCCeeEEEeCCccccccccceeEe-eccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-C
Q 010037 359 --------RKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-H 427 (519)
Q Consensus 359 --------~~s~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h 427 (519)
....++.+.+|+... ...+..+ .+|...|.+++|+|++ ++++++.|+.|++||+.++..+..+. |
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~----~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h 881 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHT----SGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGH 881 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTT----CCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred ECCCCCEEEEEcCCcEEEEEecC----CCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCC
Confidence 000122233333322 1223333 3799999999999999 99999999999999999999988886 9
Q ss_pred CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC-----------------------------------------------
Q 010037 428 NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR----------------------------------------------- 460 (519)
Q Consensus 428 ~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~----------------------------------------------- 460 (519)
...|++++|+| ++.+|++++.||.|++||+.+
T Consensus 882 ~~~v~~v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1249)
T 3sfz_A 882 LSWVHGVMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLP 960 (1249)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEEC
T ss_pred ccceEEEEECC-CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcc
Confidence 99999999999 999999999999999998532
Q ss_pred --------------------------------CcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 461 --------------------------------CQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 461 --------------------------------~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
++.+ ....|...|++++|+|+|++|++++.||.|++||+.+++...
T Consensus 961 ~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 961 EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC
T ss_pred cCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 1111 234577889999999999999999999999999999887654
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=1.1e-23 Score=218.87 Aligned_cols=235 Identities=21% Similarity=0.436 Sum_probs=191.4
Q ss_pred eeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 010037 232 ARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVW 311 (519)
Q Consensus 232 ~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iW 311 (519)
.+|...+.+++|+ +.++++|+.||.|++|++.... ....+.+|...|.++.|+ +++|++|+.||.|++|
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~w 224 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE-------CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVW 224 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEE
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc-------EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEE
Confidence 3455666677776 6799999999999999987543 234577899999999995 5689999999999999
Q ss_pred ecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCe
Q 010037 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (519)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 391 (519)
|+.+++....+..+...+.++.+ ... ..+.++.++.+.+|+... .+++..+.+|...|
T Consensus 225 d~~~~~~~~~~~~~~~~v~~~~~---~~~---------------~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v 282 (445)
T 2ovr_B 225 DIETGQCLHVLMGHVAAVRCVQY---DGR---------------RVVSGAYDFMVKVWDPET----ETCLHTLQGHTNRV 282 (445)
T ss_dssp ESSSCCEEEEEECCSSCEEEEEE---CSS---------------CEEEEETTSCEEEEEGGG----TEEEEEECCCSSCE
T ss_pred ECCCCcEEEEEcCCcccEEEEEE---CCC---------------EEEEEcCCCEEEEEECCC----CcEeEEecCCCCce
Confidence 99999888888777666666555 111 123445566777777554 34577888999999
Q ss_pred eEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-ecc
Q 010037 392 LDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTD 468 (519)
Q Consensus 392 ~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~~ 468 (519)
.+++| ++ +|++++.|+.|++||+++++++..+. |...+.++.++ +++|++|+.||.|++||+++++.+. +..
T Consensus 283 ~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 357 (445)
T 2ovr_B 283 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQG 357 (445)
T ss_dssp EEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECS
T ss_pred EEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEcc
Confidence 99999 45 99999999999999999999998886 88899988874 5799999999999999999988774 333
Q ss_pred ---CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 469 ---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 469 ---~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
|...|++++|+ +++|++|+.||.|++||+.+++...
T Consensus 358 ~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 358 PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp TTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceee
Confidence 78889999995 6799999999999999999887654
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=8e-25 Score=227.01 Aligned_cols=207 Identities=19% Similarity=0.229 Sum_probs=163.3
Q ss_pred ceeecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEecccCeeece--eeccCCCCceEEEeecCCCCeEEeeccCCceee
Q 010037 278 QEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRVWKVIEHERLDG--FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDK 354 (519)
Q Consensus 278 ~~l~~H~~~I~~l~fsp-dg~~LaSgs~Dg~I~iWd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (519)
....+|...|+||+|+| ++++||+|+.||.|+|||+.+++.... +..|...+.++.|.+.....+
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l------------ 180 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQF------------ 180 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEE------------
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEE------------
Confidence 35677999999999999 567999999999999999987764433 345677788888876443333
Q ss_pred eeeeccCCCeeEEEeCCccccccccceeEee---ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q 010037 355 TKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ---GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNY 430 (519)
Q Consensus 355 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~ 430 (519)
+.++.++.+.+|+... ..+..+. .+...+.+++|+|++ +|++|+.|++|++||++.........|...
T Consensus 181 ---~s~s~D~~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~ 252 (435)
T 4e54_B 181 ---YASSMEGTTRLQDFKG-----NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKK 252 (435)
T ss_dssp ---EEECSSSCEEEEETTS-----CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSC
T ss_pred ---EEEeCCCEEEEeeccC-----CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccce
Confidence 3456677777776543 2222222 344568899999999 999999999999999976543333349999
Q ss_pred EEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE----eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 431 VTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV----DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 431 V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~----~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
|++++|+|....+|++|+.|+.|+|||+++.+.. ....|...|++++|+|+|++|++++.||.|+|||+.+++.
T Consensus 253 v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 253 VTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp EEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred EEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 9999999955568999999999999999886533 3467889999999999999999999999999999987654
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.7e-24 Score=224.36 Aligned_cols=238 Identities=12% Similarity=0.035 Sum_probs=181.2
Q ss_pred ecccceeecCCCCeEEeeecCCeEEEeeCCccccc----------------------cccccccceee-cCCCCEEEEEE
Q 010037 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE----------------------LSSLYTGQEFL-AHEGSILTMKF 292 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~----------------------~~~~~~~~~l~-~H~~~I~~l~f 292 (519)
+.+.+++|+|||+++|+++.|++|+ +....... +........+. .|...|.+++|
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vaw 93 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKP 93 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEE
Confidence 5677899999999999999999996 32221100 00011111222 56889999999
Q ss_pred ccCCCEEEEEeCCCcEEEEecccCeeeceeeccCC-----CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEE
Q 010037 293 SLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDT-----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCV 367 (519)
Q Consensus 293 spdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 367 (519)
||+|++||+++.||.|+||+... ++..+. +.. .+.++.|++++.. ...++.++.+.
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~----------------LAsgs~DGtVk 154 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESS----------------IVVGNEDGELQ 154 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSC----------------EEEEETTSEEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCE----------------EEEEcCCCEEE
Confidence 99999999999999999999644 444444 333 2556666665432 23456677888
Q ss_pred EeCCcccccccc---ceeEe----eccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeE---EEEe--cCCCcEEEEE
Q 010037 368 VLPPKVFRLLEK---PLHEF----QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRC---LRVF--SHNNYVTSVA 435 (519)
Q Consensus 368 ~~~~~~~~~~~~---~~~~~----~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~---~~~~--~h~~~V~~v~ 435 (519)
+|+.....+.+. .+.++ .+|...|.+++|+|+| |++++.|++|++||+..+.. .+++ .|...|.+++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 888765432111 24565 6688899999999999 99999999999999988773 3455 3778999999
Q ss_pred EeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEE--eeCCCEEEEEecCCeEEEEECC
Q 010037 436 FNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCY--CPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 436 fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~--spdg~~l~sgs~dg~v~iwdl~ 500 (519)
|+ +++||+++ +++|++||+.+++.. ...+|...|..++| +||++.|++++.+|. ++|...
T Consensus 234 Fs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 234 IV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 98 48899887 799999999999884 44489999999999 999999999999999 999986
No 106
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.5e-24 Score=213.87 Aligned_cols=209 Identities=18% Similarity=0.250 Sum_probs=169.3
Q ss_pred ceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecc--cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeee
Q 010037 278 QEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI--EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (519)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (519)
+.+.+|.+.|++++|+|++++||+|+.||.|+||++. +++....+..+...+.++.|.+......
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~------------- 71 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTI------------- 71 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE-------------
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCE-------------
Confidence 4578999999999999999999999999999999998 5566666777777777777765432222
Q ss_pred eeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeE---EEEecCCC
Q 010037 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRC---LRVFSHNN 429 (519)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~--~-~L~sgs~Dg~V~lWdl~~~~~---~~~~~h~~ 429 (519)
.+.++.++.+.+|+..... ...+..+.+|...|.+++|+|+ + +|++++.|+.|++||+.++.. .....|..
T Consensus 72 -l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 72 -LASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp -EEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred -EEEeccCCEEEEEEcCCCc--eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 2334455666676654321 1246677889999999999998 7 999999999999999988732 23335999
Q ss_pred cEEEEEEeeC------------CCCEEEEEeCCCeEEEEEcCCCc----EE-eeccCCCceEEEEEeeC---CCEEEEEe
Q 010037 430 YVTSVAFNPV------------DDNYFISGSIDGKVRIWEVRRCQ----VV-DYTDIREIVSAVCYCPD---GKGGIVGT 489 (519)
Q Consensus 430 ~V~~v~fsp~------------d~~~l~sgs~Dg~V~iwd~~~~~----~~-~~~~~~~~V~~v~~spd---g~~l~sgs 489 (519)
.|++++|+|. ++.+|++|+.||.|++||++++. +. .+..|...|++++|+|+ +++|++++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 9999999995 58999999999999999998754 22 46778999999999999 89999999
Q ss_pred cCCeEEEEECCCC
Q 010037 490 MTGNCRFYDIKGM 502 (519)
Q Consensus 490 ~dg~v~iwdl~~~ 502 (519)
.||.|++||+.++
T Consensus 229 ~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 229 QDRTCIIWTQDNE 241 (379)
T ss_dssp TTSCEEEEEESST
T ss_pred CCCEEEEEeCCCC
Confidence 9999999999876
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=4.3e-24 Score=211.63 Aligned_cols=211 Identities=13% Similarity=0.187 Sum_probs=168.3
Q ss_pred ceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC----eeeceeeccCCCCceEEEeecCCCCeEEeeccCCcee
Q 010037 278 QEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH----ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKID 353 (519)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (519)
+.+.+|.+.|++++|+|++++||+|+.||.|++||+.++ +....+..+...+.++.|.+.....
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~------------ 72 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR------------ 72 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS------------
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC------------
Confidence 356799999999999999999999999999999999876 3455556677777777776542111
Q ss_pred eeeeeccCCCeeEEEeCCccccccc-----cceeEeeccCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCeEEEEe
Q 010037 354 KTKSLRKSSDLTCVVLPPKVFRLLE-----KPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDRCLRVF 425 (519)
Q Consensus 354 ~~~~~~~s~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~V~~l~~sp~--~-~L~sgs~Dg~V~lWdl~~~~~~~~~ 425 (519)
..+.++.++.+.+|+........ +++..+.+|...|.+++|+|+ + +|++++.|+.|++||+++++.+..+
T Consensus 73 --~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 73 --IIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp --EEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred --EEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 12334456667777655432211 456778899999999999998 8 9999999999999999887644322
Q ss_pred --------------cCCCcEEEEEEeeC--CCCEEEEEeCCCeEEEEEcCCCcE---EeeccCCCceEEEEEeeCC----
Q 010037 426 --------------SHNNYVTSVAFNPV--DDNYFISGSIDGKVRIWEVRRCQV---VDYTDIREIVSAVCYCPDG---- 482 (519)
Q Consensus 426 --------------~h~~~V~~v~fsp~--d~~~l~sgs~Dg~V~iwd~~~~~~---~~~~~~~~~V~~v~~spdg---- 482 (519)
.|...+.+++|+|. ++.+|++++.|+.+.+|+...++. ..+..|...|++++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 37788999999993 389999999999998888888764 2566789999999999998
Q ss_pred CEEEEEecCCeEEEEECCCC
Q 010037 483 KGGIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 483 ~~l~sgs~dg~v~iwdl~~~ 502 (519)
++|++|+.||.|++||+.++
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEEEETTSCEEEEEEEEC
T ss_pred eEEEEEcCCCeEEEEeCCCC
Confidence 89999999999999999865
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.6e-24 Score=217.27 Aligned_cols=197 Identities=12% Similarity=0.056 Sum_probs=157.9
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeec
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLD 320 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~ 320 (519)
..+.+++.++++|+.||.|++|++....... .+. ...|.++.|+|+ +++++.|++|++|+......+.
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~-------~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTIT-------TIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEE-------EEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEE-------EEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEe
Confidence 3566788999999999999999998654321 122 467888889988 9999999999999985421110
Q ss_pred eeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe-eccCCCeeEEEEcC-
Q 010037 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSK- 398 (519)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~l~~sp- 398 (519)
.. .. .+.+..+ .+|...|.+++|+|
T Consensus 110 --~~-----------------------------------------------~~----~~~~~~~~~~~~~~v~~~~~~~~ 136 (343)
T 3lrv_A 110 --DS-----------------------------------------------KT----NKVLREIEVDSANEIIYMYGHNE 136 (343)
T ss_dssp --ET-----------------------------------------------TT----CCEEEEEECCCSSCEEEEECCC-
T ss_pred --ec-----------------------------------------------CC----cceeEEeecCCCCCEEEEEcCCC
Confidence 00 00 0112222 35778999999999
Q ss_pred -CC-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE--eecc-CCC
Q 010037 399 -NG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV--DYTD-IRE 471 (519)
Q Consensus 399 -~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~--~~~~-~~~ 471 (519)
++ +|++++.|++|++||+++++++..+. +...|++++|+| ++.+|++|+.||.|+|||+++++.+ .+.. |..
T Consensus 137 ~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~ 215 (343)
T 3lrv_A 137 VNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA 215 (343)
T ss_dssp --CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC
Confidence 88 99999999999999999999977763 566899999999 9999999999999999999998866 5666 899
Q ss_pred ceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 472 ~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
.|++++|+|+|.+|++++ ++.|++||+++++.
T Consensus 216 ~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVG 247 (343)
T ss_dssp CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTT
T ss_pred CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCc
Confidence 999999999999999999 55999999998754
No 109
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.92 E-value=6.8e-23 Score=213.59 Aligned_cols=295 Identities=18% Similarity=0.142 Sum_probs=218.8
Q ss_pred ceeeeecCCCceeEEccCCCchhhhhhcccccCC--CcccccccccCCCCCCccccccCCccccccccchhhhhhhhccc
Q 010037 146 ACRIDDWGKGADLVVSDNDQDEIEIESRLQESGS--SQSVSFDEFLGTPGSSSSFVQPLPSRQDEESRDLVDAKRKVKRG 223 (519)
Q Consensus 146 ~~~~~~~d~g~~~~~~~~~~~~~~~~~~l~~v~~--~~~l~~~~f~~~~~~s~~~v~~l~~~~~~~~~~~~~~~~~~~~~ 223 (519)
.-+++|+..|+....-. +|... +..+.+ +..+.....++++. +|.+...+
T Consensus 143 ~i~vwd~~~~~~~~~~~----~h~~~--V~~l~~~~~~~l~s~s~dg~i~-----vwd~~~~~----------------- 194 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLS----GHDGG--VWALKYAHGGILVSGSTDRTVR-----VWDIKKGC----------------- 194 (464)
T ss_dssp CEEEEETTTTEEEEEEC----CCSSC--EEEEEECSTTEEEEEETTSCEE-----EEETTTTE-----------------
T ss_pred cEEEEECCCCcEEEEEe----CCCcC--EEEEEEcCCCEEEEEeCCCCEE-----EEECCCCc-----------------
Confidence 35677877776433211 23332 444443 23566666666666 77653221
Q ss_pred cccccCCeeeEeecccceeec--CCCCeEEeeecCCeEEEeeCCccccccc----------------cccccceeecCCC
Q 010037 224 WLKKLGAMARIIDRHGSATLK--PGDHELTLGQRMRRVRVHPVKKQSRELS----------------SLYTGQEFLAHEG 285 (519)
Q Consensus 224 w~~~~~~~~~~~~~~~~~~~s--p~g~~lasgs~dg~I~vw~~~~~~~~~~----------------~~~~~~~l~~H~~ 285 (519)
....+.+|...+.+++|+ |++.++++|+.||.|++|++........ .......+.+|..
T Consensus 195 ---~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (464)
T 3v7d_B 195 ---CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 271 (464)
T ss_dssp ---EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred ---EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence 111233456677778887 6889999999999999999986543211 0112345788999
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCee
Q 010037 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLT 365 (519)
Q Consensus 286 ~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 365 (519)
.|.++ ++++++|++|+.||.|++||+.+++.+..+..+...+.++.+.+... ..+.++.++.
T Consensus 272 ~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------~l~sg~~dg~ 333 (464)
T 3v7d_B 272 SVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK----------------RCISASMDTT 333 (464)
T ss_dssp CEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT----------------EEEEEETTSC
T ss_pred eEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC----------------EEEEEeCCCc
Confidence 99887 57789999999999999999999999888887777777777766432 1234556677
Q ss_pred EEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEE
Q 010037 366 CVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~ 445 (519)
+.+|+... ++++..+.+|...|.+++|++ .+|++++.|++|++||+.++.......+...+..++|+| ++.+++
T Consensus 334 i~vwd~~~----~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 407 (464)
T 3v7d_B 334 IRIWDLEN----GELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYV-SDNILV 407 (464)
T ss_dssp EEEEETTT----TEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEE-CSSEEE
T ss_pred EEEEECCC----CcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEe-CCCEEE
Confidence 88887654 356788899999999999984 499999999999999999999888888888999999999 999999
Q ss_pred EEeCCCeEEEEEcCCCcEEe--eccCCCceEEEEEeeCCCEEEEEecCCeEEEE
Q 010037 446 SGSIDGKVRIWEVRRCQVVD--YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFY 497 (519)
Q Consensus 446 sgs~Dg~V~iwd~~~~~~~~--~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iw 497 (519)
+|+ ||.|++||+++++++. ...+...|++++|+ +..++++++.+|.+.+|
T Consensus 408 ~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 408 SGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred Eec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 999 9999999999999885 57788999999997 34455556667765544
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=2e-23 Score=216.12 Aligned_cols=208 Identities=17% Similarity=0.253 Sum_probs=167.2
Q ss_pred eeecCCCCEEEEEEccC-CCEEEEEeCCCcEEEEeccc----------CeeeceeeccCCCCceEEEeecCCCCeEEeec
Q 010037 279 EFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWKVIE----------HERLDGFDVQDTDPSCLYFTINHLSQLIPIDV 347 (519)
Q Consensus 279 ~l~~H~~~I~~l~fspd-g~~LaSgs~Dg~I~iWd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (519)
....|.+.|++++|+|+ +.+||+++.||.|++|++.+ ......+..+...+.++.|.+.....
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~------ 196 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY------ 196 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE------
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe------
Confidence 45689999999999997 68999999999999999987 45556666677777777776654332
Q ss_pred cCCceeeeeeeccCCCeeEEEeCCcccccc---ccceeEeeccCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCC---
Q 010037 348 DKEKIDKTKSLRKSSDLTCVVLPPKVFRLL---EKPLHEFQGHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGID--- 419 (519)
Q Consensus 348 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~---~~~~~~~~~h~~~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~--- 419 (519)
.+.++.++.+.+|+....... ..+...+.+|...|.+++|+|+ + +|++++.|+.|++||++++
T Consensus 197 ---------l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~ 267 (430)
T 2xyi_A 197 ---------LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS 267 (430)
T ss_dssp ---------EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS
T ss_pred ---------EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC
Confidence 234556677778877652211 1235667789999999999994 4 9999999999999999987
Q ss_pred eEEEEe-cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC-cEE-eeccCCCceEEEEEeeCCC-EEEEEecCCeEE
Q 010037 420 RCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC-QVV-DYTDIREIVSAVCYCPDGK-GGIVGTMTGNCR 495 (519)
Q Consensus 420 ~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~-~~~-~~~~~~~~V~~v~~spdg~-~l~sgs~dg~v~ 495 (519)
+++..+ .|...|++++|+|....+|++|+.||.|++||+++. +.+ .+..|...|++++|+|+++ +|++++.||.|+
T Consensus 268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 456666 599999999999943448999999999999999983 333 5677999999999999995 689999999999
Q ss_pred EEECCC
Q 010037 496 FYDIKG 501 (519)
Q Consensus 496 iwdl~~ 501 (519)
|||+..
T Consensus 348 iwd~~~ 353 (430)
T 2xyi_A 348 VWDLSK 353 (430)
T ss_dssp EEEGGG
T ss_pred EEeCCC
Confidence 999986
No 111
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.4e-23 Score=201.10 Aligned_cols=220 Identities=22% Similarity=0.291 Sum_probs=175.2
Q ss_pred cccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEE--------ee
Q 010037 275 YTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIP--------ID 346 (519)
Q Consensus 275 ~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 346 (519)
...+.+.+|.+.|++++| |++++|++|+.||.|++||+.++.....+..+...+.++.+.++....+.. +.
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 344578899999999999 999999999999999999999998888888888888888887754322111 11
Q ss_pred ccCCc----e---------------eeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcC-CC-eEEEE
Q 010037 347 VDKEK----I---------------DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK-NG-FLLSS 405 (519)
Q Consensus 347 ~~~~~----~---------------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~-~L~sg 405 (519)
..... . .....+.++.++.+.+|+ ....+..+..|...|.+++|.| ++ +|+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK------EGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE------TTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred eeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc------CCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 11100 0 001123445566666665 3456778889999999999998 66 99999
Q ss_pred eCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCC
Q 010037 406 SADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDG 482 (519)
Q Consensus 406 s~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg 482 (519)
+.|+.|++|| ..+.+..+. |...|++++|+| ++. +++++.||.|++||+++++.+ .+..|...|++++|+|++
T Consensus 162 ~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 162 SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC
Confidence 9999999999 455565654 899999999999 776 999999999999999998877 567799999999999999
Q ss_pred CEEEEEecCCeEEEEECCCCeeee
Q 010037 483 KGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 483 ~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.|++++.||.|++||+.++++..
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEEE
T ss_pred -CEEEEecCCEEEEEECCCCceeE
Confidence 58999999999999999887654
No 112
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.2e-23 Score=205.66 Aligned_cols=208 Identities=18% Similarity=0.304 Sum_probs=171.5
Q ss_pred cceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeee
Q 010037 277 GQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (519)
Q Consensus 277 ~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (519)
...+.+|.+.|++++|+|++++|++|+.||.|++||+.+++....+..+...+.++.|.++.. .
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~----------------~ 88 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK----------------Y 88 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS----------------E
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCC----------------E
Confidence 346889999999999999999999999999999999999999888887777777777765432 1
Q ss_pred eeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCC-----CcEEEEECCCCeE---------
Q 010037 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD-----KTVRLWQVGIDRC--------- 421 (519)
Q Consensus 357 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~D-----g~V~lWdl~~~~~--------- 421 (519)
.+.++.++.+.+|+.... +.+..+. |...|.+++|+|++ +|++++.+ +.|++||+.....
T Consensus 89 l~s~~~dg~i~iwd~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 163 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNG----QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSE 163 (369)
T ss_dssp EEEEETTTEEEEEETTTC----CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS
T ss_pred EEEEeCCCeEEEEECCCC----cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccc
Confidence 123445667777776542 3445555 88999999999999 99999998 9999999876532
Q ss_pred --EEEe-cCCC--cEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC-CcEE-eeccCCCceEEEEEeeCCCEEEEEecCCeE
Q 010037 422 --LRVF-SHNN--YVTSVAFNPVDDNYFISGSIDGKVRIWEVRR-CQVV-DYTDIREIVSAVCYCPDGKGGIVGTMTGNC 494 (519)
Q Consensus 422 --~~~~-~h~~--~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~-~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~dg~v 494 (519)
+..+ .|.. .+++++|+| ++++|++++.||.|++||+++ .+.+ .+..|...|.+++|+|++++|++++.||.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 242 (369)
T 3zwl_B 164 EPIHKIITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS 242 (369)
T ss_dssp SCSEEEECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceeeeccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceE
Confidence 2222 2444 899999999 999999999999999999998 5555 567789999999999999999999999999
Q ss_pred EEEECCCCeeee
Q 010037 495 RFYDIKGMQIFD 506 (519)
Q Consensus 495 ~iwdl~~~~l~~ 506 (519)
++||+.++++..
T Consensus 243 ~v~d~~~~~~~~ 254 (369)
T 3zwl_B 243 FLVDVSTLQVLK 254 (369)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCceee
Confidence 999999876554
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=2.2e-23 Score=212.21 Aligned_cols=222 Identities=18% Similarity=0.313 Sum_probs=173.1
Q ss_pred cCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEecccCeeeceee----------
Q 010037 255 RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRVWKVIEHERLDGFD---------- 323 (519)
Q Consensus 255 ~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~LaSgs~Dg~I~iWd~~~~~~~~~~~---------- 323 (519)
.++.+++|++.... ....+.+|.+.|++++|+| ++++||+|+.||.|++||+.++.....+.
T Consensus 21 ~~~~~~v~~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 93 (408)
T 4a11_B 21 AESTRRVLGLELNK-------DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRD 93 (408)
T ss_dssp HHHHHHHHTEEECT-------TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTT
T ss_pred ccCcceeeccccCc-------ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccc
Confidence 45567777765332 2234678999999999999 99999999999999999999887665553
Q ss_pred ---ccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCC-
Q 010037 324 ---VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN- 399 (519)
Q Consensus 324 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~- 399 (519)
.+...+.++.|.+.....+ +.++.++.+.+|+..... .+..+ .+...+.+++|+|.
T Consensus 94 ~~~~~~~~v~~~~~~~~~~~~l---------------~s~~~d~~i~iwd~~~~~----~~~~~-~~~~~~~~~~~~~~~ 153 (408)
T 4a11_B 94 HPDVHRYSVETVQWYPHDTGMF---------------TSSSFDKTLKVWDTNTLQ----TADVF-NFEETVYSHHMSPVS 153 (408)
T ss_dssp CTTCCSSCEEEEEECTTCTTCE---------------EEEETTSEEEEEETTTTE----EEEEE-ECSSCEEEEEECSSC
T ss_pred ccccCCCcEEEEEEccCCCcEE---------------EEEeCCCeEEEeeCCCCc----cceec-cCCCceeeeEeecCC
Confidence 2445555666655333322 234456677777665422 23333 37788999999984
Q ss_pred --C-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCC-EEEEEeCCCeEEEEEcCCCcE-E-ee------
Q 010037 400 --G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRRCQV-V-DY------ 466 (519)
Q Consensus 400 --~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~-~l~sgs~Dg~V~iwd~~~~~~-~-~~------ 466 (519)
+ ++++++.|+.|++||+++++++..+. |...|++++|+| ++. +|++|+.||.|++||+++... + .+
T Consensus 154 ~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 232 (408)
T 4a11_B 154 TKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGK 232 (408)
T ss_dssp SSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTC
T ss_pred CCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccc
Confidence 3 89999999999999999999888886 999999999999 666 699999999999999987642 1 11
Q ss_pred ---------ccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 467 ---------TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 467 ---------~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
..|...|++++|+|+|++|++++.||.|++||+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 233 KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred cceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 56888999999999999999999999999999988654
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.4e-23 Score=212.65 Aligned_cols=245 Identities=11% Similarity=0.026 Sum_probs=185.1
Q ss_pred eeEeecccceeecCCCCeE-EeeecCCeEEEeeCC--ccccccccccccceee--cCCCCEEEEEEccCCCEEEEEeCCC
Q 010037 232 ARIIDRHGSATLKPGDHEL-TLGQRMRRVRVHPVK--KQSRELSSLYTGQEFL--AHEGSILTMKFSLDGQYLASGGEDG 306 (519)
Q Consensus 232 ~~~~~~~~~~~~sp~g~~l-asgs~dg~I~vw~~~--~~~~~~~~~~~~~~l~--~H~~~I~~l~fspdg~~LaSgs~Dg 306 (519)
..+...+.+++|+|++++| ++|+.||.|+||++. .... .+.+. .|...|.+++|+|++++|++|+.||
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 171 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-------LKLRKRFCFSKRPNAISIAEDDTTVIIADKFG 171 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-------EEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-------eeeeecccCCCCceEEEEcCCCCEEEEEeCCC
Confidence 3455678889999999996 889999999999987 3321 12333 6789999999999999999999999
Q ss_pred cEEEEecccCeeec----eeeccCCCCceEEEeecC-CCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccce
Q 010037 307 TVRVWKVIEHERLD----GFDVQDTDPSCLYFTINH-LSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL 381 (519)
Q Consensus 307 ~I~iWd~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 381 (519)
.|++|++.++.... .+..+...+.++.|.++. ... ..+.++.++.+.+|+... .+.+
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--------------~l~s~~~d~~i~vwd~~~----~~~~ 233 (450)
T 2vdu_B 172 DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ--------------FIITSDRDEHIKISHYPQ----CFIV 233 (450)
T ss_dssp EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE--------------EEEEEETTSCEEEEEESC----TTCE
T ss_pred cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc--------------EEEEEcCCCcEEEEECCC----Ccee
Confidence 99999998877554 566667777778777761 111 122344556677776543 2334
Q ss_pred eE-eeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecC--------------------------CCcEEE
Q 010037 382 HE-FQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH--------------------------NNYVTS 433 (519)
Q Consensus 382 ~~-~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h--------------------------~~~V~~ 433 (519)
.. +.+|...|.+++|+ ++ +|++++.|++|+|||+.+++++..+.. ...|.+
T Consensus 234 ~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 234 DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp EEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred eeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 44 56899999999999 88 999999999999999999998888751 356899
Q ss_pred EEEeeCCCCEEEEEe-CCCeEEEEEc--CCC---cEEe-eccCCCceEEEEEeeCCCEEEEEec------CCeEEEEECC
Q 010037 434 VAFNPVDDNYFISGS-IDGKVRIWEV--RRC---QVVD-YTDIREIVSAVCYCPDGKGGIVGTM------TGNCRFYDIK 500 (519)
Q Consensus 434 v~fsp~d~~~l~sgs-~Dg~V~iwd~--~~~---~~~~-~~~~~~~V~~v~~spdg~~l~sgs~------dg~v~iwdl~ 500 (519)
++|+| ++++|++++ .|+.|+||++ .++ +.+. +..+ ..|.+++|+|++.++++++. +..|.+|.+.
T Consensus 313 i~~~~-~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 313 IIKSK-NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEECS-SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEeC-CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 99999 999999999 8999999999 554 4443 3444 88999999996544433333 4457888654
Q ss_pred --CCee
Q 010037 501 --GMQI 504 (519)
Q Consensus 501 --~~~l 504 (519)
++++
T Consensus 391 ~~~~~~ 396 (450)
T 2vdu_B 391 LNENSF 396 (450)
T ss_dssp TTTTEE
T ss_pred cCCCeE
Confidence 4444
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=5.1e-22 Score=201.89 Aligned_cols=240 Identities=11% Similarity=0.097 Sum_probs=183.3
Q ss_pred cccceeecCCCCeE-EeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEE-EeCCCcEEEEecc
Q 010037 237 RHGSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLAS-GGEDGTVRVWKVI 314 (519)
Q Consensus 237 ~~~~~~~sp~g~~l-asgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaS-gs~Dg~I~iWd~~ 314 (519)
.+.+++|+|+++++ ++++.++.|++|+...... .+.+..|. .|.+++|+|++++|+. ++.|+.|++||+.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~-------~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV-------IATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE-------EEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeE-------EEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 34578999999987 6777999999999875442 22344444 8999999999998855 4567999999999
Q ss_pred cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEE
Q 010037 315 EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (519)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 394 (519)
+++....+..+. .+..+.+.++... + .+....++.+.+|+.... +.+..+..| ..+.++
T Consensus 105 ~~~~~~~~~~~~-~~~~~~~s~dg~~-l--------------~~~~~~~~~v~~~d~~~~----~~~~~~~~~-~~~~~~ 163 (391)
T 1l0q_A 105 SNTVAGTVKTGK-SPLGLALSPDGKK-L--------------YVTNNGDKTVSVINTVTK----AVINTVSVG-RSPKGI 163 (391)
T ss_dssp TTEEEEEEECSS-SEEEEEECTTSSE-E--------------EEEETTTTEEEEEETTTT----EEEEEEECC-SSEEEE
T ss_pred CCeEEEEEeCCC-CcceEEECCCCCE-E--------------EEEeCCCCEEEEEECCCC----cEEEEEecC-CCcceE
Confidence 998877665433 3344444443321 1 122344566777766542 334445544 557999
Q ss_pred EEcCCC-eE-EEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe---CCCeEEEEEcCCCcEEeeccC
Q 010037 395 SWSKNG-FL-LSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS---IDGKVRIWEVRRCQVVDYTDI 469 (519)
Q Consensus 395 ~~sp~~-~L-~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs---~Dg~V~iwd~~~~~~~~~~~~ 469 (519)
+|+|++ +| ++++.++.|++||+++++++..+.+...+.+++|+| ++++|++++ .++.|++||+.+++.+.....
T Consensus 164 ~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 242 (391)
T 1l0q_A 164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV 242 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEec
Confidence 999999 55 677889999999999999999998888999999999 888888887 689999999999988865555
Q ss_pred CCceEEEEEeeCCCEE-EEEecCCeEEEEECCCCeeee
Q 010037 470 REIVSAVCYCPDGKGG-IVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 470 ~~~V~~v~~spdg~~l-~sgs~dg~v~iwdl~~~~l~~ 506 (519)
...+.+++|+|+|++| ++++.|+.|++||+.++++..
T Consensus 243 ~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 243 GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 5678999999999987 566889999999999988754
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=1e-22 Score=210.06 Aligned_cols=246 Identities=11% Similarity=0.094 Sum_probs=193.8
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~ 317 (519)
+.+++|+|++.++++++.++.|++|+....... .......+.+|.+.|.+++|+++++++++++.|+.|++||+.+++
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 446899998888888999999999998865432 111122356899999999999999999999999999999999988
Q ss_pred eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEc
Q 010037 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 397 (519)
....+..+...+.++.+.+.....+ +....++.+.+|+.... +.+..+.. ...+.+++|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~---------------~~~~~~~~i~~~d~~~~----~~~~~~~~-~~~~~~~~~~ 262 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVY---------------CSNWISEDISVIDRKTK----LEIRKTDK-IGLPRGLLLS 262 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEE---------------EEETTTTEEEEEETTTT----EEEEECCC-CSEEEEEEEC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEE---------------EEecCCCcEEEEECCCC----cEEEEecC-CCCceEEEEc
Confidence 8887776666666676665442211 12233456666665432 22344443 3459999999
Q ss_pred CCC-eEEEEe--------CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCC-EEEEEeCCCeEEEEEcCCCcEEeec
Q 010037 398 KNG-FLLSSS--------ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRRCQVVDYT 467 (519)
Q Consensus 398 p~~-~L~sgs--------~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~-~l~sgs~Dg~V~iwd~~~~~~~~~~ 467 (519)
|++ +|++++ .|+.|++||+.+++.+..+.|...+.+++|+| +++ ++++++.|+.|++||+.+++++...
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcEEEEe
Confidence 999 888877 58899999999999998888888999999999 775 5567789999999999999888766
Q ss_pred cCCCceEEEEEeeCCCEEEEEec---------------CCeEEEEECCCCeeee
Q 010037 468 DIREIVSAVCYCPDGKGGIVGTM---------------TGNCRFYDIKGMQIFD 506 (519)
Q Consensus 468 ~~~~~V~~v~~spdg~~l~sgs~---------------dg~v~iwdl~~~~l~~ 506 (519)
.+...+.+++|+|+|++|++++. ||.|++||+.++++..
T Consensus 342 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 342 PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 78888999999999999988876 5799999999887654
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=4.4e-22 Score=205.26 Aligned_cols=246 Identities=10% Similarity=0.084 Sum_probs=187.4
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEE-EEeCCCcEEEEe
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGEDGTVRVWK 312 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-Sgs~Dg~I~iWd 312 (519)
|...+.+++|+|++.++++++.++.|++|++..... ...+..|...+.+++|+|++++|+ +++.|+.|++||
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY-------KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE-------EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE-------EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 445666789999999999999999999999875332 234667899999999999999885 455899999999
Q ss_pred cccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCee
Q 010037 313 VIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (519)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 392 (519)
+.+++....+.... .+..+.+.+... .++......... ...++.+.+|+..... .+. ...|...+.
T Consensus 241 ~~~~~~~~~~~~~~-~~~~~~~~~~g~-~l~~~~~~~~~~-------~~~dg~i~~~d~~~~~----~~~-~~~~~~~~~ 306 (433)
T 3bws_A 241 RKTKLEIRKTDKIG-LPRGLLLSKDGK-ELYIAQFSASNQ-------ESGGGRLGIYSMDKEK----LID-TIGPPGNKR 306 (433)
T ss_dssp TTTTEEEEECCCCS-EEEEEEECTTSS-EEEEEEEESCTT-------CSCCEEEEEEETTTTE----EEE-EEEEEECEE
T ss_pred CCCCcEEEEecCCC-CceEEEEcCCCC-EEEEEECCCCcc-------ccCCCeEEEEECCCCc----EEe-eccCCCCcc
Confidence 99988776665432 234444444332 122221111110 0246677777765432 222 235666899
Q ss_pred EEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeC---------------CCeEEE
Q 010037 393 DLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSI---------------DGKVRI 455 (519)
Q Consensus 393 ~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~---------------Dg~V~i 455 (519)
+++|+|++ .+++++.|+.|++||+.+++.+..+.+...+.+++|+| +++++++++. ||.|++
T Consensus 307 ~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~ 385 (433)
T 3bws_A 307 HIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYV 385 (433)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEE
T ss_pred eEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEE
Confidence 99999998 55677899999999999999999999999999999999 8998888876 579999
Q ss_pred EEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEec-CCeEEEEECCC
Q 010037 456 WEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTM-TGNCRFYDIKG 501 (519)
Q Consensus 456 wd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~-dg~v~iwdl~~ 501 (519)
||+.+++.+........+.+++|+|+|++|++++. |+.|++|++.+
T Consensus 386 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 386 IDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 99999998876666778999999999999998875 99999999864
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=4.3e-22 Score=200.93 Aligned_cols=214 Identities=14% Similarity=0.058 Sum_probs=135.6
Q ss_pred eeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecC---------CCCeEEeeccC
Q 010037 279 EFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINH---------LSQLIPIDVDK 349 (519)
Q Consensus 279 ~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 349 (519)
.+.+|...|++++|+|||++||+|+.|+ ++||++.+++........ ....+.+.... ...+..++...
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 4578999999999999999999998775 789999877665444322 23333332221 11222222221
Q ss_pred Cceeeeee-------eccC-------CCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEE--EeCCCcEEE
Q 010037 350 EKIDKTKS-------LRKS-------SDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLS--SSADKTVRL 413 (519)
Q Consensus 350 ~~~~~~~~-------~~~s-------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~s--gs~Dg~V~l 413 (519)
........ +... .+..+.+|+.... .+.+..+.. ....+++++ .+++. |+.||.|++
T Consensus 91 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~---~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 91 KQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNP---WKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp TEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTT---CCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEEE
T ss_pred CcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCC---ceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEEE
Confidence 11110000 0000 1111222222111 011222221 223344455 44444 688999999
Q ss_pred EECCCCe---------------E-EEEe-cCCCcEEEEEEeeCCCCEEEEEeCCCe-EEEEEcCCCcEEe-ec-c-CCCc
Q 010037 414 WQVGIDR---------------C-LRVF-SHNNYVTSVAFNPVDDNYFISGSIDGK-VRIWEVRRCQVVD-YT-D-IREI 472 (519)
Q Consensus 414 Wdl~~~~---------------~-~~~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg~-V~iwd~~~~~~~~-~~-~-~~~~ 472 (519)
||+.++. + +..+ .|...|++++|+| ++.+|++|+.|++ |+|||+++++.+. +. + |...
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~ 242 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD 242 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc
Confidence 9999865 1 4455 4999999999999 9999999999998 9999999998875 44 3 8999
Q ss_pred eEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
|++++|+|+|++|++++.||.|+|||+..+.
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999999999999999999999998653
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=8.6e-22 Score=193.67 Aligned_cols=208 Identities=19% Similarity=0.223 Sum_probs=155.2
Q ss_pred eecccceeecCCCCeEEeeecCCeEEEeeCCccccccc----------------------------------ccccccee
Q 010037 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS----------------------------------SLYTGQEF 280 (519)
Q Consensus 235 ~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~----------------------------------~~~~~~~l 280 (519)
...+.+++|+|++++|++|+.||+|+||++........ .......+
T Consensus 67 ~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~ 146 (318)
T 4ggc_A 67 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL 146 (318)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEE
Confidence 34567899999999999999999999999876442110 01112346
Q ss_pred ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeece----eeccCCCCceEEEeecCCCCeEEeeccCCceeeee
Q 010037 281 LAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDG----FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (519)
Q Consensus 281 ~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (519)
.+|...+.++.|++++++|++++.||.|++||+.+++.... ...+...+..+.+.+..... ..
T Consensus 147 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-------------~~ 213 (318)
T 4ggc_A 147 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV-------------LA 213 (318)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE-------------EE
T ss_pred cCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE-------------EE
Confidence 78999999999999999999999999999999987654322 12222223333333332222 22
Q ss_pred eeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEe--CCCcEEEEECCCCeEEEEec-CCCcEE
Q 010037 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSS--ADKTVRLWQVGIDRCLRVFS-HNNYVT 432 (519)
Q Consensus 357 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs--~Dg~V~lWdl~~~~~~~~~~-h~~~V~ 432 (519)
...++.+..+.+|+.... .......|...+..+.|+|.+ .+++++ .|++|+|||+++++++..+. |...|+
T Consensus 214 ~~~~~~~~~i~lwd~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSG-----ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL 288 (318)
T ss_dssp EEECTTTCEEEEEETTTC-----CEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEecCCCCEEEEEecccc-----cccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 234555666777765442 234445678889999999998 665544 79999999999999999997 999999
Q ss_pred EEEEeeCCCCEEEEEeCCCeEEEEEcCCC
Q 010037 433 SVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (519)
Q Consensus 433 ~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~ 461 (519)
+|+|+| ++++|++|+.||+|+|||+.+.
T Consensus 289 ~l~~sp-dg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 289 SLTMSP-DGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECT-TSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcC-CCCEEEEEecCCeEEEEECCCC
Confidence 999999 9999999999999999999764
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=2.8e-21 Score=196.45 Aligned_cols=229 Identities=13% Similarity=0.153 Sum_probs=178.6
Q ss_pred CeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEecccCeeeceeeccC
Q 010037 248 HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHERLDGFDVQD 326 (519)
Q Consensus 248 ~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~~~~~~~~~~~~~ 326 (519)
.++++++.++.|++|++..... .+.+.+|. .+.+++|+|++++| ++++.|+.|++||+.+++....+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~-------~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV-------TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE-------EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCCCeE-------EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC
Confidence 4678899999999999875432 22455554 58999999999977 677799999999999999887776654
Q ss_pred CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eE-EE
Q 010037 327 TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FL-LS 404 (519)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L-~s 404 (519)
.+..+.+.++....+ +.+..++.+.+|+.... +.+..+. +...+.+++|+|++ .| ++
T Consensus 75 -~v~~~~~spdg~~l~---------------~~~~~~~~v~v~d~~~~----~~~~~~~-~~~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVY---------------VTNMASSTLSVIDTTSN----TVAGTVK-TGKSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp -SEEEEEECTTSSEEE---------------EEETTTTEEEEEETTTT----EEEEEEE-CSSSEEEEEECTTSSEEEEE
T ss_pred -CccceEECCCCCEEE---------------EEECCCCEEEEEECCCC----eEEEEEe-CCCCcceEEECCCCCEEEEE
Confidence 455555555432111 12333456666765542 2234444 34578999999999 55 78
Q ss_pred EeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEE-EEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCC
Q 010037 405 SSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYF-ISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (519)
Q Consensus 405 gs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l-~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~ 483 (519)
++.|+.|++||+.+++.+..+.....+.+++|+| +++++ ++++.++.|++||+++++.+....+...+.+++|+|+|+
T Consensus 134 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 212 (391)
T 1l0q_A 134 NNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGT 212 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSS
T ss_pred eCCCCEEEEEECCCCcEEEEEecCCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCC
Confidence 8889999999999999999998777889999999 78776 677889999999999999887777788899999999999
Q ss_pred EEEEEe---cCCeEEEEECCCCeeee
Q 010037 484 GGIVGT---MTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 484 ~l~sgs---~dg~v~iwdl~~~~l~~ 506 (519)
+|++++ .++.|++||+.+++...
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEE
T ss_pred EEEEEecCcCCCcEEEEECCCCeEEE
Confidence 999988 68999999999886543
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=5.2e-22 Score=198.86 Aligned_cols=209 Identities=20% Similarity=0.275 Sum_probs=161.2
Q ss_pred cceeecCCCCEEEEEEccC---CCEEEEEeCCCcEEEEeccc-Ceee-ceeeccCCCCceEEEeecCCCCeEEeeccCCc
Q 010037 277 GQEFLAHEGSILTMKFSLD---GQYLASGGEDGTVRVWKVIE-HERL-DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEK 351 (519)
Q Consensus 277 ~~~l~~H~~~I~~l~fspd---g~~LaSgs~Dg~I~iWd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (519)
.+.+.+|.+.|++++|+|+ |++|++|+.||.|+|||+.+ +..+ ..+..+...+.++.|.++..
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~------------ 99 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS------------ 99 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS------------
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC------------
Confidence 3456789999999999998 69999999999999999987 4444 56666777777777766432
Q ss_pred eeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEE--cCCC-eEEEEeCCCcEEEEECCCCeEEEEecCC
Q 010037 352 IDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW--SKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHN 428 (519)
Q Consensus 352 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~--sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~ 428 (519)
..+.++.++.+.+|+..... ...+.+|...|.+++| +|++ +|++++.|+.|++||+++++++..+...
T Consensus 100 ----~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 100 ----KVFTASCDKTAKMWDLSSNQ-----AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp ----EEEEEETTSEEEEEETTTTE-----EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred ----EEEEEcCCCcEEEEEcCCCC-----ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence 12334556777788765432 3346779999999999 8888 8999999999999999988776665422
Q ss_pred ------------------------------------------CcEEEEEEeeCCCCE----EEEEeCCCeEEEEEcCCCc
Q 010037 429 ------------------------------------------NYVTSVAFNPVDDNY----FISGSIDGKVRIWEVRRCQ 462 (519)
Q Consensus 429 ------------------------------------------~~V~~v~fsp~d~~~----l~sgs~Dg~V~iwd~~~~~ 462 (519)
..+.++++.+ +... +++|+.||.|++||++...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 171 ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 3345555555 3333 9999999999999998863
Q ss_pred ---E-EeeccCCC------------ceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 463 ---V-VDYTDIRE------------IVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 463 ---~-~~~~~~~~------------~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
. ..+..|.. .|++++|+|++++|++|+.||.|++||+.++++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE
Confidence 2 23444544 799999999999999999999999999998876543
No 122
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=8.4e-22 Score=203.20 Aligned_cols=212 Identities=20% Similarity=0.246 Sum_probs=161.2
Q ss_pred EeecccceeecCCCCeEEeeecCCeEEEeeCCccccccc----------------------------------cccccce
Q 010037 234 IIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS----------------------------------SLYTGQE 279 (519)
Q Consensus 234 ~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~----------------------------------~~~~~~~ 279 (519)
|.+.|.+++|+|+|++||+|+.||.|+||++........ .......
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEE
Confidence 345577899999999999999999999999875432110 0111235
Q ss_pred eecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeee----ceeeccCCCCceEEEeecCCCCeEEeeccCCceeee
Q 010037 280 FLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL----DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (519)
Q Consensus 280 l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (519)
+.+|...+..+.|+|++++|++++.|+.|++|++.+++.. .....+...+..+.+.+.....++
T Consensus 226 ~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la------------ 293 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA------------ 293 (420)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE------------
T ss_pred ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEE------------
Confidence 6789999999999999999999999999999999876532 233344444555555554443332
Q ss_pred eeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEe--CCCcEEEEECCCCeEEEEec-CCCcE
Q 010037 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSS--ADKTVRLWQVGIDRCLRVFS-HNNYV 431 (519)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs--~Dg~V~lWdl~~~~~~~~~~-h~~~V 431 (519)
...++.++.+.+|+.... +.+..+. +...+.++.|+|++ .|++++ .|++|+|||+.+++++..+. |...|
T Consensus 294 -~~~gs~D~~I~iwd~~t~----~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V 367 (420)
T 4gga_A 294 -TGGGTSDRHIRIWNVCSG----ACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 367 (420)
T ss_dssp -EEECTTTCEEEEEETTTT----EEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred -EEeecCCCEEEEEeCCcc----ccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 234566778888877653 3344444 44678999999998 666654 79999999999999999987 99999
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE
Q 010037 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (519)
Q Consensus 432 ~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~ 464 (519)
++|+|+| ++.+|++|+.|++|+|||+......
T Consensus 368 ~~l~~sp-dg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 368 LSLTMSP-DGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp EEEEECT-TSSCEEEEETTTEEEEECCSCSSCC
T ss_pred EEEEEcC-CCCEEEEEecCCeEEEEECCCCCcc
Confidence 9999999 9999999999999999999875544
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.9e-22 Score=223.66 Aligned_cols=209 Identities=18% Similarity=0.246 Sum_probs=167.0
Q ss_pred ceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecc--cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeee
Q 010037 278 QEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI--EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (519)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (519)
..+.+|.++|++++|+|++++|++|+.||.|+||++. ++.....+..+...+.++.|.+......
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~------------- 69 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTI------------- 69 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSE-------------
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCE-------------
Confidence 3578999999999999999999999999999999998 5566667777777777777765532222
Q ss_pred eeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCC--C-eEEEEeCCCcEEEEECCCCe---EEEEecCCC
Q 010037 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKN--G-FLLSSSADKTVRLWQVGIDR---CLRVFSHNN 429 (519)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~--~-~L~sgs~Dg~V~lWdl~~~~---~~~~~~h~~ 429 (519)
.+.++.++.+.+|+..... ...+..+.+|...|.+++|+|+ + .|++|+.||+|++||++++. ......|..
T Consensus 70 -l~s~s~Dg~I~vwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 70 -LASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp -EEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred -EEEEeCCCeEEEEECCCCc--ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 2344556667777654321 1246677889999999999998 7 99999999999999998873 233335999
Q ss_pred cEEEEEEeeC------------CCCEEEEEeCCCeEEEEEcCCCc----EE-eeccCCCceEEEEEeeC---CCEEEEEe
Q 010037 430 YVTSVAFNPV------------DDNYFISGSIDGKVRIWEVRRCQ----VV-DYTDIREIVSAVCYCPD---GKGGIVGT 489 (519)
Q Consensus 430 ~V~~v~fsp~------------d~~~l~sgs~Dg~V~iwd~~~~~----~~-~~~~~~~~V~~v~~spd---g~~l~sgs 489 (519)
.|++++|+|. ++.+|++|+.||.|++||++++. +. .+..|...|++++|+|+ +++|++|+
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 9999999994 48899999999999999998763 33 46789999999999999 89999999
Q ss_pred cCCeEEEEECCCC
Q 010037 490 MTGNCRFYDIKGM 502 (519)
Q Consensus 490 ~dg~v~iwdl~~~ 502 (519)
.||.|++||+.++
T Consensus 227 ~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 227 QDRTCIIWTQDNE 239 (753)
T ss_dssp SSSCEEEEEESSS
T ss_pred cCCEEEEecCCCC
Confidence 9999999999876
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.9e-22 Score=209.05 Aligned_cols=223 Identities=8% Similarity=0.052 Sum_probs=167.1
Q ss_pred eecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCC-----CEEEEEEccCCCEEEEEeCCCcEE
Q 010037 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG-----SILTMKFSLDGQYLASGGEDGTVR 309 (519)
Q Consensus 235 ~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~-----~I~~l~fspdg~~LaSgs~Dg~I~ 309 (519)
.+.+.+++|+|+|.+||+++.||.|+||+... ....+. |.. .|.+++|||||++||+|+.||+|+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE---------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 46677899999999999999999999999543 112234 554 599999999999999999999999
Q ss_pred EEecccCee-------eceee----ccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc
Q 010037 310 VWKVIEHER-------LDGFD----VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (519)
Q Consensus 310 iWd~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 378 (519)
|||+.++.. +..+. .+...+.++.|.+++ + +.++.+..+.+|+.......
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---L---------------aass~D~tVrlWd~~~~~~~- 215 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---L---------------VAALSNNSVFSMTVSASSHQ- 215 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---E---------------EEEETTCCEEEECCCSSSSC-
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---E---------------EEEeCCCeEEEEECCCCccc-
Confidence 999988753 34442 233455566666543 2 23445677888876543311
Q ss_pred cceeEe-eccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeE-EEEecCCCcEEEEEE--eeCCCCEEEEEeCCCeEE
Q 010037 379 KPLHEF-QGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRC-LRVFSHNNYVTSVAF--NPVDDNYFISGSIDGKVR 454 (519)
Q Consensus 379 ~~~~~~-~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~-~~~~~h~~~V~~v~f--sp~d~~~l~sgs~Dg~V~ 454 (519)
...+++ .+|...|.+++|+ ++.|++++ +++|++||+.+++. ...+.|...|+.++| +| ++..+++++.||+ +
T Consensus 216 ~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-k 291 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-K 291 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-E
T ss_pred cceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-E
Confidence 123456 4788999999999 44888887 69999999999988 444489999999999 99 8999999999999 9
Q ss_pred EEEcCCCc------E-----------------EeeccCCCceEEEEEeeCCCEEEEEec
Q 010037 455 IWEVRRCQ------V-----------------VDYTDIREIVSAVCYCPDGKGGIVGTM 490 (519)
Q Consensus 455 iwd~~~~~------~-----------------~~~~~~~~~V~~v~~spdg~~l~sgs~ 490 (519)
+|....-. . +....+...|++++|+|||+.+|+++.
T Consensus 292 lw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 292 VLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp EEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred EEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 99874211 0 111112335899999999999998873
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=6.8e-22 Score=202.26 Aligned_cols=162 Identities=19% Similarity=0.233 Sum_probs=123.3
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCee
Q 010037 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLT 365 (519)
Q Consensus 286 ~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 365 (519)
.+....+.+++.+||+|+.|++|+|||+.++.....
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~-------------------------------------------- 126 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ-------------------------------------------- 126 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEE--------------------------------------------
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCcccee--------------------------------------------
Confidence 333344445667899999999999999987764221
Q ss_pred EEEeCCccccccccceeEeeccCCCeeEEEEcC--------CC-eEEEEeCCCcEEEEECCCCeEEE-EecCCCcEEEEE
Q 010037 366 CVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK--------NG-FLLSSSADKTVRLWQVGIDRCLR-VFSHNNYVTSVA 435 (519)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp--------~~-~L~sgs~Dg~V~lWdl~~~~~~~-~~~h~~~V~~v~ 435 (519)
.++..+.+|.+.|++++|+| ++ +|++++.|++|+|||+.++.++. .+.|...|.+++
T Consensus 127 -------------~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~ 193 (393)
T 4gq1_A 127 -------------HVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQ 193 (393)
T ss_dssp -------------EEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEE
T ss_pred -------------eeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEE
Confidence 11334678999999999998 56 99999999999999998876654 456999999999
Q ss_pred EeeCCCCEEEEEeCCCeEEEEEcCCCcEEe--------------------------eccCCCceEEEEEe-eCCCEEEEE
Q 010037 436 FNPVDDNYFISGSIDGKVRIWEVRRCQVVD--------------------------YTDIREIVSAVCYC-PDGKGGIVG 488 (519)
Q Consensus 436 fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~--------------------------~~~~~~~V~~v~~s-pdg~~l~sg 488 (519)
|+|.+.++|++|+.|++|++||+++++... ...|...+.++.|+ |||+.|+++
T Consensus 194 ~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~ 273 (393)
T 4gq1_A 194 FRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM 273 (393)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE
T ss_pred ECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE
Confidence 999444689999999999999998865321 23466778899987 799999999
Q ss_pred ecCCeEEEEECCCCee
Q 010037 489 TMTGNCRFYDIKGMQI 504 (519)
Q Consensus 489 s~dg~v~iwdl~~~~l 504 (519)
+.|+.+++||+.+++.
T Consensus 274 s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 274 CKSGAWLRWNLFANND 289 (393)
T ss_dssp CTTSEEEEEEC-----
T ss_pred eCCCCEEEEECccCCC
Confidence 9999999999987653
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=2.8e-20 Score=191.81 Aligned_cols=207 Identities=13% Similarity=0.109 Sum_probs=166.2
Q ss_pred CeeeEeecccceeecCCCCeEEeeecCC---eEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEE-EEeCC
Q 010037 230 AMARIIDRHGSATLKPGDHELTLGQRMR---RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGED 305 (519)
Q Consensus 230 ~~~~~~~~~~~~~~sp~g~~lasgs~dg---~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-Sgs~D 305 (519)
.+..+...+.+++|+|+|++|++++.++ .|++|++..+.. ..+..|.+.+.+++|+|||++|+ +++.|
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--------~~l~~~~~~~~~~~~spdg~~la~~~~~~ 244 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--------RQVASFPRHNGAPAFSPDGSKLAFALSKT 244 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--------EEEECCSSCEEEEEECTTSSEEEEEECTT
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE--------EEeecCCCcccCEEEcCCCCEEEEEEecC
Confidence 3455666777899999999999998875 999999975432 23567888999999999999888 66666
Q ss_pred Cc--EEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 306 GT--VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 306 g~--I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
+. |++||+.+++. ..
T Consensus 245 g~~~i~~~d~~~~~~---------------------------------------------------------------~~ 261 (415)
T 2hqs_A 245 GSLNLYVMDLASGQI---------------------------------------------------------------RQ 261 (415)
T ss_dssp SSCEEEEEETTTCCE---------------------------------------------------------------EE
T ss_pred CCceEEEEECCCCCE---------------------------------------------------------------Ee
Confidence 65 88899876542 22
Q ss_pred eeccCCCeeEEEEcCCC-eEEEEeC-CC--cEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCC---CeEEEE
Q 010037 384 FQGHSSEVLDLSWSKNG-FLLSSSA-DK--TVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSID---GKVRIW 456 (519)
Q Consensus 384 ~~~h~~~V~~l~~sp~~-~L~sgs~-Dg--~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~D---g~V~iw 456 (519)
+..|...+.+++|+|+| +|++++. ++ .|.+||+.+++......+...+.+++|+| ++++|++++.+ ..|++|
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEE
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEE
Confidence 34567789999999999 7887776 44 68888999887655445778999999999 99999888764 589999
Q ss_pred EcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCC---eEEEEECCCCeeeeccc
Q 010037 457 EVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTG---NCRFYDIKGMQIFDLST 509 (519)
Q Consensus 457 d~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg---~v~iwdl~~~~l~~~~~ 509 (519)
|+.+++...+..+. .+.+++|+|||++|++++.++ .|++||+.++.+..+..
T Consensus 341 d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 341 DLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp ETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred ECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 99999887666654 899999999999999988877 79999998877766643
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.86 E-value=4.6e-20 Score=181.38 Aligned_cols=178 Identities=13% Similarity=0.037 Sum_probs=124.9
Q ss_pred CCEEEEEEccC----CCEEEEEeCCCcEEEEecccCeeecee-eccCCCCceEEEeecCCCCeEEeeccCCceeeeeeec
Q 010037 285 GSILTMKFSLD----GQYLASGGEDGTVRVWKVIEHERLDGF-DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLR 359 (519)
Q Consensus 285 ~~I~~l~fspd----g~~LaSgs~Dg~I~iWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (519)
..|+.|+|+|| ++++++++.+ +++|++.+++.+... ..+.
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d--------------------------------- 156 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSD--------------------------------- 156 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTT---------------------------------
T ss_pred cceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCC---------------------------------
Confidence 36777788888 8888888754 788888766644331 1112
Q ss_pred cCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcC---CC-eEEEEeCCCcEEEEECCCCeEEEEec-C---CCcE
Q 010037 360 KSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK---NG-FLLSSSADKTVRLWQVGIDRCLRVFS-H---NNYV 431 (519)
Q Consensus 360 ~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp---~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h---~~~V 431 (519)
..+.+|... ..++.+..+.+|...+..++|++ ++ +|++++.|++|+|||+.++++++++. | ...+
T Consensus 157 ----~~V~~~~~s---~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 157 ----QQVEVMTFA---EDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASV 229 (356)
T ss_dssp ----CEEEEEEEC---TTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCC
T ss_pred ----CcEEEEEEC---CCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeee
Confidence 122222110 01233556778999999999999 55 99999999999999999999999996 3 3467
Q ss_pred EEEEEeeCCCCEE------------EEEeCCCeEEEEEcCCCcEEee------ccCCCceEEEEEeeCCCEEEEEecCCe
Q 010037 432 TSVAFNPVDDNYF------------ISGSIDGKVRIWEVRRCQVVDY------TDIREIVSAVCYCPDGKGGIVGTMTGN 493 (519)
Q Consensus 432 ~~v~fsp~d~~~l------------~sgs~Dg~V~iwd~~~~~~~~~------~~~~~~V~~v~~spdg~~l~sgs~dg~ 493 (519)
.+++|+| ++.++ ++|+.|++|++||..+++.+.. .+|...+. ..+.++.++++|+.||+
T Consensus 230 ~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~l--sg~~sg~~lASgS~DgT 306 (356)
T 2w18_A 230 CHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFL--EGDVKDHCAAAILTSGT 306 (356)
T ss_dssp EEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEE--EEEEETTEEEEEETTSC
T ss_pred EEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeE--ccccCCCEEEEEcCCCc
Confidence 8889999 88876 6688999999999999987642 24444444 33445889999999999
Q ss_pred EEEEECCCCeeeec
Q 010037 494 CRFYDIKGMQIFDL 507 (519)
Q Consensus 494 v~iwdl~~~~l~~~ 507 (519)
|+|||+.++++.+.
T Consensus 307 IkIWDl~tGk~l~t 320 (356)
T 2w18_A 307 IAIWDLLLGQCTAL 320 (356)
T ss_dssp EEEEETTTCSEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 99999999886553
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.2e-20 Score=195.60 Aligned_cols=211 Identities=15% Similarity=0.090 Sum_probs=154.3
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccc---------cccccccceeecCCCCEEEEEEccCCCEEE----EEe
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE---------LSSLYTGQEFLAHEGSILTMKFSLDGQYLA----SGG 303 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~---------~~~~~~~~~l~~H~~~I~~l~fspdg~~La----Sgs 303 (519)
..+.+++++++.++++|+.++ |+||+....... .... .......|...|.+++|+|+|++|| +|+
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDK-VQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEEC-CCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCccccccc-CccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 456689999999999999888 899876422110 0000 1111234677899999999999999 788
Q ss_pred CCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 304 EDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 304 ~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
.|+.|+|||+.++..... ..... ...+..
T Consensus 116 ~d~~v~iwd~~~~~~~~~-----~~~~~----------------------------------------------~~~~~~ 144 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAK-----QQKRP----------------------------------------------FAYHKL 144 (434)
T ss_dssp TEEEEEEEEHHHHHCTTC-----SSCCC----------------------------------------------SEEEEC
T ss_pred CCceEEEEEccccccCCc-----CCcce----------------------------------------------eeeeec
Confidence 999999999865411000 00000 001234
Q ss_pred eeccCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC
Q 010037 384 FQGHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (519)
Q Consensus 384 ~~~h~~~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~ 460 (519)
+.+|...|.+++|+|+ + +|++++.|++|++||++++..+... .|...|++++|+| ++++|++|+.||+|++||++
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~- 222 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT- 222 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-
Confidence 5679999999999998 5 9999999999999999998765443 4889999999999 89999999999999999998
Q ss_pred CcEE-eecc-------CCCceEEEEEeeCCCEEEEE-ecCC------eEEEEECCCC
Q 010037 461 CQVV-DYTD-------IREIVSAVCYCPDGKGGIVG-TMTG------NCRFYDIKGM 502 (519)
Q Consensus 461 ~~~~-~~~~-------~~~~V~~v~~spdg~~l~sg-s~dg------~v~iwdl~~~ 502 (519)
++.. .... |...|.+++|++++.++++. ..+| .+++|++...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 223 LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3333 2222 23379999999998877653 3443 3899999854
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=2.6e-19 Score=184.53 Aligned_cols=190 Identities=13% Similarity=0.040 Sum_probs=153.6
Q ss_pred CCeEEeeecC------CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCC---cEEEEecccCe
Q 010037 247 DHELTLGQRM------RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG---TVRVWKVIEHE 317 (519)
Q Consensus 247 g~~lasgs~d------g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg---~I~iWd~~~~~ 317 (519)
+..++.++.+ ++|++||+.... .+.+.+|...|.+++|+|||++|++++.|+ .|++||+.+++
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~--------~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~ 214 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN--------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 214 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS--------CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC--------CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc
Confidence 5566665554 799999986322 245778999999999999999999999885 99999998765
Q ss_pred eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEc
Q 010037 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 397 (519)
.. .+..|...+.+++|+
T Consensus 215 ~~---------------------------------------------------------------~l~~~~~~~~~~~~s 231 (415)
T 2hqs_A 215 VR---------------------------------------------------------------QVASFPRHNGAPAFS 231 (415)
T ss_dssp EE---------------------------------------------------------------EEECCSSCEEEEEEC
T ss_pred EE---------------------------------------------------------------EeecCCCcccCEEEc
Confidence 31 234566789999999
Q ss_pred CCC-eEE-EEeCCCc--EEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeC-CC--eEEEEEcCCCcEEeeccCC
Q 010037 398 KNG-FLL-SSSADKT--VRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSI-DG--KVRIWEVRRCQVVDYTDIR 470 (519)
Q Consensus 398 p~~-~L~-sgs~Dg~--V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~-Dg--~V~iwd~~~~~~~~~~~~~ 470 (519)
|+| .|+ +++.++. |++||+.++++.....|...+.+++|+| ++++|++++. ++ .|++||+.+++...+..+.
T Consensus 232 pdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~ 310 (415)
T 2hqs_A 232 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG 310 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCEECCCSS
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCEEEEecCC
Confidence 999 666 6666655 9999999998866666888999999999 9999988886 44 7888899988877666777
Q ss_pred CceEEEEEeeCCCEEEEEecC---CeEEEEECCCCeeeecc
Q 010037 471 EIVSAVCYCPDGKGGIVGTMT---GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 471 ~~V~~v~~spdg~~l~sgs~d---g~v~iwdl~~~~l~~~~ 508 (519)
..+..++|+|||++|++++.+ +.|++||+.++++..+.
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 889999999999999988865 58999999988776554
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=9.3e-18 Score=178.79 Aligned_cols=259 Identities=10% Similarity=0.039 Sum_probs=180.1
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeC--CccccccccccccceeecCCCCEEEEEEcc----CCCEEEEEeC-CCcEEE
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPV--KKQSRELSSLYTGQEFLAHEGSILTMKFSL----DGQYLASGGE-DGTVRV 310 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~--~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp----dg~~LaSgs~-Dg~I~i 310 (519)
+..++|+|+|++|++++.++.|++||+ .... ...++. +...+..++|+| ||++|++++. +++|.|
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-------~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v 252 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-------KVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAI 252 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-------EEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-------EEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEE
Confidence 346889999999999999999999999 4322 223444 345679999999 9999999885 899999
Q ss_pred EecccCeeeceeeccC----------C-CCceEEEeecC---------CCCeEEeeccCCceee----------------
Q 010037 311 WKVIEHERLDGFDVQD----------T-DPSCLYFTINH---------LSQLIPIDVDKEKIDK---------------- 354 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~----------~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~---------------- 354 (519)
||..+++.+..+.... . .+..+.+.+.. ...+..+.........
T Consensus 253 ~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~s 332 (543)
T 1nir_A 253 MDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWD 332 (543)
T ss_dssp EETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEEC
T ss_pred EeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceEC
Confidence 9999998887776421 1 22333443322 2223333322211000
Q ss_pred ----eeeeccCCCeeEEEeCCccccccccceeEeec----cCCCeeEEEEcCCC--eEEEEe-CCCcEEEEECCC-----
Q 010037 355 ----TKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG----HSSEVLDLSWSKNG--FLLSSS-ADKTVRLWQVGI----- 418 (519)
Q Consensus 355 ----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~V~~l~~sp~~--~L~sgs-~Dg~V~lWdl~~----- 418 (519)
........+..+.+|+..... .+..+.. |.+....+ ++|++ .++++. .|++|.|||+.+
T Consensus 333 pdg~~l~va~~~~~~v~v~D~~tg~----l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~ 407 (543)
T 1nir_A 333 SSHRYFMTAANNSNKVAVIDSKDRR----LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ 407 (543)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTTE----EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred CCCCEEEEEecCCCeEEEEECCCCe----EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch
Confidence 011122234455555554432 3344442 55443333 46774 666665 689999999998
Q ss_pred --CeEEEEec-CCCcEEEEEEeeCCCCEEEEEe-------CCCeEEEEEcCCCcEE-ee---------ccCCCceEEEEE
Q 010037 419 --DRCLRVFS-HNNYVTSVAFNPVDDNYFISGS-------IDGKVRIWEVRRCQVV-DY---------TDIREIVSAVCY 478 (519)
Q Consensus 419 --~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs-------~Dg~V~iwd~~~~~~~-~~---------~~~~~~V~~v~~ 478 (519)
.++++++. |...+..|+|+| ++++|++++ .+++|.|||+.+.+.. .. ..+...+..+.|
T Consensus 408 ~~~~~v~~l~~~g~~~~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 486 (543)
T 1nir_A 408 YAWKKVAELQGQGGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 486 (543)
T ss_dssp TBTSEEEEEECSCSCCCCEECCT-TCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE
T ss_pred hcCeEEEEEEcCCCCceEEEcCC-CCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccC
Confidence 88999987 778889999999 999999987 2679999999988765 32 245678999999
Q ss_pred eeCCCEEEEEe-----cCCeEEEEECCCCeeeecccc
Q 010037 479 CPDGKGGIVGT-----MTGNCRFYDIKGMQIFDLSTT 510 (519)
Q Consensus 479 spdg~~l~sgs-----~dg~v~iwdl~~~~l~~~~~~ 510 (519)
+|+|+.|+++. .++.|.|||.+++++...-..
T Consensus 487 ~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 487 NKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp CSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred CCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence 99999999774 379999999999998765443
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=3.8e-17 Score=157.74 Aligned_cols=226 Identities=13% Similarity=0.111 Sum_probs=158.2
Q ss_pred eeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEeccc-CeeeceeeccC-CCC
Q 010037 252 LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE-HERLDGFDVQD-TDP 329 (519)
Q Consensus 252 sgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~-~~~~~~~~~~~-~~~ 329 (519)
.++.++.|++|++...... .+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......+. ..+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~--------~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR--------VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE--------EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCCcee--------eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccc
Confidence 3567899999998754421 3556889999999999999999986 78999999988 76554443332 344
Q ss_pred ceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEE-EEeC
Q 010037 330 SCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLL-SSSA 407 (519)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~-sgs~ 407 (519)
..+.|.++....++.. ... .....+..++... .....+..+ ..+..++|+|++ +|+ ++..
T Consensus 88 ~~~~~spdg~~l~~~~-~~~-----------~~~~~l~~~~~~~-----~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 88 NDHGISPDGALYAISD-KVE-----------FGKSAIYLLPSTG-----GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp SCCEECTTSSEEEEEE-CTT-----------TSSCEEEEEETTC-----CCCEECCSS-SSEEEEEECTTSSEEEEEEEE
T ss_pred cceEECCCCCEEEEEE-eCC-----------CCcceEEEEECCC-----CceEEeecC-CCccceEECCCCCEEEEEECC
Confidence 5566666543222211 111 0122233332211 112333333 348899999999 555 7888
Q ss_pred CCcEEEEEC--CCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe-CCCeEEEEEcC--CCcEEeeccCCCceEEEEEeeCC
Q 010037 408 DKTVRLWQV--GIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVR--RCQVVDYTDIREIVSAVCYCPDG 482 (519)
Q Consensus 408 Dg~V~lWdl--~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs-~Dg~V~iwd~~--~~~~~~~~~~~~~V~~v~~spdg 482 (519)
++.++||++ .++.......+...+.+++|+| ++++|+.++ .++.++||++. .+....+..+...+..++|+|+|
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 150 DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp TTEEEEEEEETTTCCEEECCCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS
T ss_pred CCceEEEEEECCCCcceEcccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC
Confidence 999999985 4556555556888999999999 888877666 58999999875 44555666777889999999999
Q ss_pred CEEEEEecC-----------CeEEEEECCCCeee
Q 010037 483 KGGIVGTMT-----------GNCRFYDIKGMQIF 505 (519)
Q Consensus 483 ~~l~sgs~d-----------g~v~iwdl~~~~l~ 505 (519)
++|++++.+ +.|++||+.+++..
T Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 229 DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred CEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 999988876 56999999987653
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=6.6e-17 Score=160.18 Aligned_cols=248 Identities=12% Similarity=0.135 Sum_probs=156.0
Q ss_pred ecccceeecCCCCeEEeeecC-CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeC-CCcEEEEec
Q 010037 236 DRHGSATLKPGDHELTLGQRM-RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE-DGTVRVWKV 313 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~d-g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~-Dg~I~iWd~ 313 (519)
..+.+++|+|++++|++++.+ +.|++|++......+. ....+..+. .+..++|+|+|++|++++. ++.|.+||+
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT---FAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE---EEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCcee---eccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 345568999999999888876 9999999872211111 112233333 7889999999998877665 889999999
Q ss_pred c---cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcc-cccccccee--Eeec-
Q 010037 314 I---EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV-FRLLEKPLH--EFQG- 386 (519)
Q Consensus 314 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~--~~~~- 386 (519)
. ..+....+... ..+..+.+.++... ++... ..+..+.+|+... ..+. .+. .+..
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~-l~~~~--------------~~~~~v~~~d~~~~~~~~--~~~~~~~~~~ 175 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGL-DGCHSANISPDNRT-LWVPA--------------LKQDRICLFTVSDDGHLV--AQDPAEVTTV 175 (343)
T ss_dssp ETTEEEEEEEEECCC-TTBCCCEECTTSSE-EEEEE--------------GGGTEEEEEEECTTSCEE--EEEEEEEECS
T ss_pred CCCccccccccccCC-CCceEEEECCCCCE-EEEec--------------CCCCEEEEEEecCCCcee--eecccccccC
Confidence 4 33333333322 22444555544322 22111 1223344443322 1110 011 2222
Q ss_pred cCCCeeEEEEcCCC-eEEEE-eCCCcEEEEECCC--CeE--EEEec-------CCCcEEEEEEeeCCCCEEE-EEeCCCe
Q 010037 387 HSSEVLDLSWSKNG-FLLSS-SADKTVRLWQVGI--DRC--LRVFS-------HNNYVTSVAFNPVDDNYFI-SGSIDGK 452 (519)
Q Consensus 387 h~~~V~~l~~sp~~-~L~sg-s~Dg~V~lWdl~~--~~~--~~~~~-------h~~~V~~v~fsp~d~~~l~-sgs~Dg~ 452 (519)
....+.+++|+|++ +|+.+ ..++.|.+|++.. ++. +..+. ....+..++|+| ++++|+ ++..++.
T Consensus 176 ~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 176 EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASL 254 (343)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-CCCEEEEEecCCCE
Confidence 34578899999999 56544 5889999999953 332 22222 134677899999 887776 4557999
Q ss_pred EEEEEcC--CC--cEEeeccCCCceEEEEEeeCCCEEEEEe-cCCeEEEE--ECCCCeeee
Q 010037 453 VRIWEVR--RC--QVVDYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFY--DIKGMQIFD 506 (519)
Q Consensus 453 V~iwd~~--~~--~~~~~~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iw--dl~~~~l~~ 506 (519)
|++||+. ++ +.+........+..++|+|+|++|++++ .++.|.+| |..++++..
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 315 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHE 315 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred EEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeE
Confidence 9999998 33 3333333334488999999999988887 57999999 555665543
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.78 E-value=1.6e-16 Score=158.43 Aligned_cols=242 Identities=12% Similarity=0.074 Sum_probs=172.4
Q ss_pred cccceeecCCCCeEEeeec-------CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEE-EEeCCCcE
Q 010037 237 RHGSATLKPGDHELTLGQR-------MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGEDGTV 308 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~-------dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-Sgs~Dg~I 308 (519)
....++++|+++++++++. ++.|.+||....... ..+. +...+..++|+|+|++|+ +...++.|
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~-------~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT-------QAIH-NDLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE-------EEEE-ESSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE-------EEEe-cCCCcceEEECCCCCEEEEEecCCCEE
Confidence 3446899999998888763 678999998754421 1222 234477899999999655 45557999
Q ss_pred EEEecccCeeeceeeccCCC---------CceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccc
Q 010037 309 RVWKVIEHERLDGFDVQDTD---------PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 379 (519)
.+||+.+++....+..+... +..+.+.++... ++... ...+..+.+|+.... +
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~-------------~~~~~~i~~~d~~~~----~ 175 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT-VYISG-------------IGKESVIWVVDGGNI----K 175 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE-EEEEE-------------ESSSCEEEEEETTTT----E
T ss_pred EEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCE-EEEEe-------------cCCCceEEEEcCCCC----c
Confidence 99999999887777664322 233444443321 11111 122445566655432 2
Q ss_pred ceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-----CCCcEEEEEEeeCCCCEEEEEeC-CCe
Q 010037 380 PLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGSI-DGK 452 (519)
Q Consensus 380 ~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-----h~~~V~~v~fsp~d~~~l~sgs~-Dg~ 452 (519)
.+..+..+...+.+++|+|++ +|++++.++.|.+||+.+++.+..+. +...+..++|+| +++++++++. ++.
T Consensus 176 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 176 LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAAE 254 (353)
T ss_dssp EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSSE
T ss_pred eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCCE
Confidence 344455456668899999999 89999999999999999999888775 355788999999 8887666654 599
Q ss_pred EEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCCeeee
Q 010037 453 VRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 453 V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~~l~~ 506 (519)
|.+||+.+++.+........ ..++|+|+|++++++. .++.|.+||+.++++..
T Consensus 255 v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 99999999988754443333 5699999999766655 68999999999888654
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=1.3e-17 Score=172.74 Aligned_cols=201 Identities=15% Similarity=0.139 Sum_probs=145.3
Q ss_pred ecccceeecCCCCeEE----eeecCCeEEEeeCCcccc----ccccccccceeecCCCCEEEEEEccC-CCEEEEEeCCC
Q 010037 236 DRHGSATLKPGDHELT----LGQRMRRVRVHPVKKQSR----ELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDG 306 (519)
Q Consensus 236 ~~~~~~~~sp~g~~la----sgs~dg~I~vw~~~~~~~----~~~~~~~~~~l~~H~~~I~~l~fspd-g~~LaSgs~Dg 306 (519)
..+.+++|+|++++|+ +|+.|+.|+||++..... ....+.....+.+|...|.+++|+|+ +.+|++++.||
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 4567799999999999 789999999999865310 00111223456789999999999997 88999999999
Q ss_pred cEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 307 TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
+|++||+.++.. +....+
T Consensus 173 ~v~iwD~~~~~~--------------------------------------------------------------~~~~~~ 190 (434)
T 2oit_A 173 SIAVLQVTETVK--------------------------------------------------------------VCATLP 190 (434)
T ss_dssp CEEEEEESSSEE--------------------------------------------------------------EEEEEC
T ss_pred eEEEEEcCCCcc--------------------------------------------------------------eeeccC
Confidence 999999976632 112345
Q ss_pred cCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-C-------CCcEEEEEEeeCCCCEEEE-EeCCC-----
Q 010037 387 HSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-H-------NNYVTSVAFNPVDDNYFIS-GSIDG----- 451 (519)
Q Consensus 387 h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h-------~~~V~~v~fsp~d~~~l~s-gs~Dg----- 451 (519)
|...|.+++|+|+| +|++|+.|++|++||++ ++....+. | ...|.+++|++ ++.++++ ...||
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSC
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCC
Confidence 78899999999999 99999999999999998 55555543 2 23899999999 7766654 33443
Q ss_pred -eEEEEEcCCCc-----E-Eeec-------cCCCceEEEEEeeCCCEEEEEec-CCeEEEEECC
Q 010037 452 -KVRIWEVRRCQ-----V-VDYT-------DIREIVSAVCYCPDGKGGIVGTM-TGNCRFYDIK 500 (519)
Q Consensus 452 -~V~iwd~~~~~-----~-~~~~-------~~~~~V~~v~~spdg~~l~sgs~-dg~v~iwdl~ 500 (519)
.+++|++++.. . ..+. ..+.+...+.+-++.+++++++. .+.|.|....
T Consensus 269 ~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 269 PDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp CEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred CceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 39999998652 1 1111 22333344555688888777665 3446666643
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=6e-17 Score=160.40 Aligned_cols=245 Identities=9% Similarity=0.123 Sum_probs=164.4
Q ss_pred ceeecCCCCeEEeeec-CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCC---cEEEEeccc
Q 010037 240 SATLKPGDHELTLGQR-MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG---TVRVWKVIE 315 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~-dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg---~I~iWd~~~ 315 (519)
.++|+|+++++++++. ++.|.+|+....... ...+..+..++.+++|+|+|++|+++..++ .|.+||+.+
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK------VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCE------EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee------EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 6899999997766555 899999998754421 234556666666699999999999555553 899999999
Q ss_pred CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccc-ccccceeEeeccCCCeeEE
Q 010037 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFR-LLEKPLHEFQGHSSEVLDL 394 (519)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~V~~l 394 (519)
++.+..+.... .+..+.+.++... ++........ .+.+|+...-. +.... .....+...+..+
T Consensus 118 ~~~~~~~~~~~-~~~~~~~spdg~~-l~~~~~~~~~-------------~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~ 181 (331)
T 3u4y_A 118 NKFISTIPIPY-DAVGIAISPNGNG-LILIDRSSAN-------------TVRRFKIDADGVLFDTG-QEFISGGTRPFNI 181 (331)
T ss_dssp TEEEEEEECCT-TEEEEEECTTSSC-EEEEEETTTT-------------EEEEEEECTTCCEEEEE-EEEECSSSSEEEE
T ss_pred CCeEEEEECCC-CccceEECCCCCE-EEEEecCCCc-------------eEEEEEECCCCcEeecC-CccccCCCCccce
Confidence 98877665533 2355566555432 3332222222 02222111000 00000 1112344568999
Q ss_pred EEcCCC-eEE-EEeCCCcEEEEECCCCeE---EEEecCCCcEEEEEEeeCCCCEEEEEe-CCCeEEEEEcCCCcE--Ee-
Q 010037 395 SWSKNG-FLL-SSSADKTVRLWQVGIDRC---LRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRRCQV--VD- 465 (519)
Q Consensus 395 ~~sp~~-~L~-sgs~Dg~V~lWdl~~~~~---~~~~~h~~~V~~v~fsp~d~~~l~sgs-~Dg~V~iwd~~~~~~--~~- 465 (519)
+|+|++ +|+ ++..++.|++||+.+++. +..+.....+..++|+| ++++++++. .++.|.+||+.++++ +.
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCceeeecc
Confidence 999999 554 455789999999999887 77777778889999999 898766554 578899999999877 21
Q ss_pred ecc----CC---CceEEEEEeeCCCEEEEEec-CCeEEEEECCCCeeeec
Q 010037 466 YTD----IR---EIVSAVCYCPDGKGGIVGTM-TGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 466 ~~~----~~---~~V~~v~~spdg~~l~sgs~-dg~v~iwdl~~~~l~~~ 507 (519)
... .. .....++|+|||++|++++. ++.|.+||+.+..+-.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 261 FGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp EECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred cccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 111 11 12356899999998876655 56999999998776444
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=1.7e-17 Score=160.28 Aligned_cols=231 Identities=12% Similarity=0.017 Sum_probs=155.0
Q ss_pred eEeecccceeecCCCCeEEeeecCCeEEEeeCCc-cccccccccccceeecC-CCCEEEEEEccCCCEEEEEe--CCCcE
Q 010037 233 RIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKK-QSRELSSLYTGQEFLAH-EGSILTMKFSLDGQYLASGG--EDGTV 308 (519)
Q Consensus 233 ~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~-~~~~~~~~~~~~~l~~H-~~~I~~l~fspdg~~LaSgs--~Dg~I 308 (519)
.+...+.+++|+|++++|++++ ++.|++|++.. .... ..+..| ...|.+++|+|+|++|++++ .++.+
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-------KVDTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE-------ECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce-------EeccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 3455677899999999999986 88999999976 4322 112334 46789999999999999998 44566
Q ss_pred EEEecc--cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 309 RVWKVI--EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 309 ~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
+||.+. ++. ...+.... ....+.|.++....++.... +..+.+|... ........+..
T Consensus 111 ~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~---~~~~~~~~~~~ 170 (297)
T 2ojh_A 111 AIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMD---IDSGVETRLTH 170 (297)
T ss_dssp EEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEE---TTTCCEEECCC
T ss_pred eEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECC---------------CCceEEEEEE---CCCCcceEccc
Confidence 666653 333 22222221 23333444433222211111 1112222211 11123445667
Q ss_pred cCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECC-CCeEEEEe-cCCCcEEEEEEeeCCCCEEEEEeCC-----------C
Q 010037 387 HSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVG-IDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSID-----------G 451 (519)
Q Consensus 387 h~~~V~~l~~sp~~-~L~sgs-~Dg~V~lWdl~-~~~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~D-----------g 451 (519)
|...+.+++|+|++ .|+.++ .++.++||++. .+..+..+ .|...+.+++|+| ++++|++++.+ +
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~ 249 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDV 249 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCce
Confidence 88899999999999 666555 58999999886 34444444 4778899999999 99999888765 5
Q ss_pred eEEEEEcCCCcEE---eeccCCCceEEEEEeeCCCEEEEEecCC
Q 010037 452 KVRIWEVRRCQVV---DYTDIREIVSAVCYCPDGKGGIVGTMTG 492 (519)
Q Consensus 452 ~V~iwd~~~~~~~---~~~~~~~~V~~v~~spdg~~l~sgs~dg 492 (519)
.|++||+.+++.. ....+...+..++|+|+|+.|++++.+.
T Consensus 250 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 250 RVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 6999999987654 3446778899999999999999887654
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=5.5e-17 Score=172.81 Aligned_cols=195 Identities=10% Similarity=0.072 Sum_probs=153.9
Q ss_pred eecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEec--ccCeee
Q 010037 242 TLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKV--IEHERL 319 (519)
Q Consensus 242 ~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~--~~~~~~ 319 (519)
+++|++.++++++.+++|.+||...... .+.+..+.. +..++|+|||++|++++.|++|++||+ .+++.+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~-------~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKI-------VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCE-------EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceE-------EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE
Confidence 5899999999999999999999875432 234552322 899999999999999999999999999 555432
Q ss_pred ceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcC-
Q 010037 320 DGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK- 398 (519)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp- 398 (519)
.. +. +...+..++|+|
T Consensus 216 ~~--------------------------------------------------------------i~-~g~~p~~va~sp~ 232 (543)
T 1nir_A 216 AE--------------------------------------------------------------IK-IGIEARSVESSKF 232 (543)
T ss_dssp EE--------------------------------------------------------------EE-CCSEEEEEEECCS
T ss_pred EE--------------------------------------------------------------Ee-cCCCcceEEeCCC
Confidence 21 22 234578999999
Q ss_pred ---CC-eEEEEe-CCCcEEEEECCCCeEEEEecC------------CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC
Q 010037 399 ---NG-FLLSSS-ADKTVRLWQVGIDRCLRVFSH------------NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (519)
Q Consensus 399 ---~~-~L~sgs-~Dg~V~lWdl~~~~~~~~~~h------------~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~ 461 (519)
+| +|++++ .+++|.|||..++++++.+.. ...+..+.++|.+..++++...+++|.+||+.+.
T Consensus 233 ~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 233 KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp TTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred cCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 98 787777 589999999999999988752 2378999999955556777778999999999886
Q ss_pred cEEe--eccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCCeeeec
Q 010037 462 QVVD--YTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 462 ~~~~--~~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~~l~~~ 507 (519)
+.+. ...+...+..++|+|+|++|++++ .+++|.+||+.++++...
T Consensus 313 ~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 313 DNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp SSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 5432 445666788999999999877655 588999999999987653
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=8.7e-16 Score=153.39 Aligned_cols=247 Identities=13% Similarity=0.101 Sum_probs=156.7
Q ss_pred ecccceeecCCCCeEEeeec---CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe-CCCcEEEE
Q 010037 236 DRHGSATLKPGDHELTLGQR---MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG-EDGTVRVW 311 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~---dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs-~Dg~I~iW 311 (519)
.....++|+|+|+ |++++. ++.|++|++...... ....+..|...+..++|+|+|++|++++ .++.|.+|
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~-----~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH-----KLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE-----EEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE-----EeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 3444589999999 555444 689999998543321 1123445677889999999999998888 68999999
Q ss_pred eccc-Ce--eeceeeccCC---------CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCc-cccccc
Q 010037 312 KVIE-HE--RLDGFDVQDT---------DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPK-VFRLLE 378 (519)
Q Consensus 312 d~~~-~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~~~ 378 (519)
++.. +. .+..+..... .+..+.+.++.. ++..... +..+.+|+.. ...+
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~--l~v~~~~--------------~~~v~~~~~~~~g~~-- 175 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR--LAVIDLG--------------SDKVYVYNVSDAGQL-- 175 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC--EEEEETT--------------TTEEEEEEECTTSCE--
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc--EEEEeCC--------------CCEEEEEEECCCCcE--
Confidence 9963 22 2222221111 122344544443 3332222 2233333322 1000
Q ss_pred cceeEeecc-CCCeeEEEEcCCC-eEEE-EeCCCcEEEEECCC--CeEE--EEec-CC------CcEEEEEEeeCCCCEE
Q 010037 379 KPLHEFQGH-SSEVLDLSWSKNG-FLLS-SSADKTVRLWQVGI--DRCL--RVFS-HN------NYVTSVAFNPVDDNYF 444 (519)
Q Consensus 379 ~~~~~~~~h-~~~V~~l~~sp~~-~L~s-gs~Dg~V~lWdl~~--~~~~--~~~~-h~------~~V~~v~fsp~d~~~l 444 (519)
..+..+..+ ...+..++|+|+| +|++ +..++.|.+|++.. ++.. ..+. .. ..+..++|+| ++++|
T Consensus 176 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l 254 (347)
T 3hfq_A 176 SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFL 254 (347)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEE
T ss_pred EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEE
Confidence 011122222 2367889999999 5555 56789999999874 5432 2222 22 4689999999 88876
Q ss_pred -EEEeCCCeEEEEEcCCC---cEE-eeccCCCceEEEEEeeCCCEEEEEecC-CeEEEE--ECCCCeeeec
Q 010037 445 -ISGSIDGKVRIWEVRRC---QVV-DYTDIREIVSAVCYCPDGKGGIVGTMT-GNCRFY--DIKGMQIFDL 507 (519)
Q Consensus 445 -~sgs~Dg~V~iwd~~~~---~~~-~~~~~~~~V~~v~~spdg~~l~sgs~d-g~v~iw--dl~~~~l~~~ 507 (519)
++...++.|.+|++... +.+ ....+...+..++|+|||++|++++.+ +.|.+| |..++++..+
T Consensus 255 ~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 255 YVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp EEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEec
Confidence 55667899999999732 333 234445668899999999998888764 899999 6677877654
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=5.2e-16 Score=154.26 Aligned_cols=249 Identities=9% Similarity=0.063 Sum_probs=167.0
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCC-CCEEEEEEccCCCEEE-EEeCCCcEEEEecccCee
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHE-GSILTMKFSLDGQYLA-SGGEDGTVRVWKVIEHER 318 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~-~~I~~l~fspdg~~La-Sgs~Dg~I~iWd~~~~~~ 318 (519)
+++++++.++++++.+++|++||....... +.+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++.
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVY-------KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEE-------EEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEE-------EEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 578899999999999999999998754321 1233222 2577899999998664 555789999999999987
Q ss_pred eceeeccCC------CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCee
Q 010037 319 LDGFDVQDT------DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (519)
Q Consensus 319 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 392 (519)
...+..... .+..+.+.++....+.. ...... ...........+.+|+...... .+.+..+. +...+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~---~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~-~~~~~~ 151 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYAT-VNPTQR---LNDHYVVKPPRLEVFSTADGLE-AKPVRTFP-MPRQVY 151 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEE-EEEEEE---CSSCEEECCCEEEEEEGGGGGG-BCCSEEEE-CCSSCC
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEE-cccccc---cccccccCCCeEEEEECCCccc-cceeeecc-CCCccc
Confidence 776664332 14555665554322221 110000 0000001124566666544222 12233333 334689
Q ss_pred EEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCCC-------------------------------------------
Q 010037 393 DLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNN------------------------------------------- 429 (519)
Q Consensus 393 ~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~------------------------------------------- 429 (519)
+++|+|++.+++++ +.|.+||+.+++.+..+....
T Consensus 152 ~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 152 LMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp CEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred ceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 99999999544444 349999999988877664221
Q ss_pred --------------------------cEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCC
Q 010037 430 --------------------------YVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (519)
Q Consensus 430 --------------------------~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~ 483 (519)
.+.+++|+|.++++++++ ++.|.+||+.+++.+........+..++|+|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGD 307 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSS
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCC
Confidence 234556667467777777 8899999999998876555556678999999999
Q ss_pred EEEEEecCCeEEEEECCCCeeee
Q 010037 484 GGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 484 ~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+|++++.++.|++||+.+++++.
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp CEEEESBSSEEEEEETTTTEEEE
T ss_pred EEEEecCCCeEEEEeccccceee
Confidence 99998889999999999887654
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.74 E-value=3.4e-17 Score=180.79 Aligned_cols=200 Identities=13% Similarity=0.094 Sum_probs=152.7
Q ss_pred cccceeecCCCCeEEeeec-CC-----eEEEeeCCccccccccccccceeecCC------------------------CC
Q 010037 237 RHGSATLKPGDHELTLGQR-MR-----RVRVHPVKKQSRELSSLYTGQEFLAHE------------------------GS 286 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~-dg-----~I~vw~~~~~~~~~~~~~~~~~l~~H~------------------------~~ 286 (519)
.+.+++|+|||++|++++. ++ .|++|++..+.... .+..|. ..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-------LVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-------EECGGGTC--------------------CCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-------ccchhhcccccccccchhhhhhhhhhhccccC
Confidence 4556899999999999988 88 99999987654321 111221 23
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeE
Q 010037 287 ILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (519)
Q Consensus 287 I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 366 (519)
|.+++|+|||++|++++. +.|++||+.++...
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~----------------------------------------------- 142 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA----------------------------------------------- 142 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----------------------------------------------
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----------------------------------------------
Confidence 789999999999999986 89999999766200
Q ss_pred EEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCc--------------
Q 010037 367 VVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNY-------------- 430 (519)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~-------------- 430 (519)
....+..|...+.+++|+|+| +|+.++ ++.|++||+.+++...... +...
T Consensus 143 -------------~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~ 208 (741)
T 2ecf_A 143 -------------AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEM 208 (741)
T ss_dssp -------------SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHS
T ss_pred -------------eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeecc
Confidence 011233466779999999999 788777 4699999999988776654 2222
Q ss_pred --EEEEEEeeCCCCEEEEEeCCC---------------------------------eEEEEEcCC-CcEEeec---cCCC
Q 010037 431 --VTSVAFNPVDDNYFISGSIDG---------------------------------KVRIWEVRR-CQVVDYT---DIRE 471 (519)
Q Consensus 431 --V~~v~fsp~d~~~l~sgs~Dg---------------------------------~V~iwd~~~-~~~~~~~---~~~~ 471 (519)
+.+++|+| |+++|++++.|+ .|++||+.+ ++..... .+..
T Consensus 209 ~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 287 (741)
T 2ecf_A 209 DRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDI 287 (741)
T ss_dssp CCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSE
T ss_pred ccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcce
Confidence 47899999 999999988765 899999998 8765433 4677
Q ss_pred ceEEEEEeeCCCEEEEEec-----CCeEEEEECCCCeeeec
Q 010037 472 IVSAVCYCPDGKGGIVGTM-----TGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 472 ~V~~v~~spdg~~l~sgs~-----dg~v~iwdl~~~~l~~~ 507 (519)
.+..++| |||++|++++. ++.|++||+.++++..+
T Consensus 288 ~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 288 YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE
T ss_pred EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE
Confidence 8999999 99999998764 56799999998876543
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.74 E-value=6.7e-16 Score=152.52 Aligned_cols=235 Identities=11% Similarity=0.154 Sum_probs=160.4
Q ss_pred CeEEeeecCCeEEEeeCCccccccccccccceee-cCCC-CEEEEEEccCCCEE-EEEeCCCcEEEEecccCeeeceeec
Q 010037 248 HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL-AHEG-SILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHERLDGFDV 324 (519)
Q Consensus 248 ~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~-~H~~-~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~~~~~~~~~~~ 324 (519)
.++++++.++.|++||....... ..+. ++.. .+..++|+|+|++| +++..++.|.+||+.+++....+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVD-------KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEE-------EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEE-------EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 47889999999999998754321 1222 2222 47889999999866 5556688999999999887766654
Q ss_pred cC-----CCCceEEEeecCCCCeEEeeccCCceeeeeeeccC---CCeeEEEeCCccccccccceeEeeccCCCeeEEEE
Q 010037 325 QD-----TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKS---SDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (519)
Q Consensus 325 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 396 (519)
.. ..+..+.+.++....+. ..... ...... .+..+.+|+.... +.+..+.. ...+.+++|
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~------~~~~~~~~~~~~~i~v~d~~~~----~~~~~~~~-~~~~~~~~~ 142 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAI-YESPV------RLELTHFEVQPTRVALYDAETL----SRRKAFEA-PRQITMLAW 142 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEE-EEEEE------EECSSCEEECCCEEEEEETTTT----EEEEEEEC-CSSCCCEEE
T ss_pred CCcccccccccceEECCCCCEEEE-Eeccc------ccccccccccCceEEEEECCCC----cEEEEEeC-CCCcceeEE
Confidence 32 13445555544322111 11000 000000 2345566655432 22333332 446788899
Q ss_pred cCCC-eEEEEeCCCcEEEEECCCCeEEEEecC------------------------------------------------
Q 010037 397 SKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH------------------------------------------------ 427 (519)
Q Consensus 397 sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h------------------------------------------------ 427 (519)
+|++ +|+++ ++.|.+||+.+++.+..+..
T Consensus 143 s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 143 ARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp CTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred CCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 9998 67766 68899999988877655431
Q ss_pred -------------------CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEE
Q 010037 428 -------------------NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVG 488 (519)
Q Consensus 428 -------------------~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sg 488 (519)
...+.+++|+| ++++++++ ++.|++||+.+++.+........+.+++|+|||++|+++
T Consensus 221 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred eEEEeCCCCCceEeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE
Confidence 12345689999 89998888 799999999999888655556678899999999999999
Q ss_pred ecCCeEEEEECCCCeeee
Q 010037 489 TMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 489 s~dg~v~iwdl~~~~l~~ 506 (519)
+.++.|++||+.++++..
T Consensus 298 ~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 298 GALGDLAAYDAETLEKKG 315 (337)
T ss_dssp SBSSEEEEEETTTCCEEE
T ss_pred cCCCcEEEEECcCCcEEE
Confidence 999999999999887653
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=4.1e-17 Score=175.23 Aligned_cols=235 Identities=11% Similarity=0.015 Sum_probs=163.5
Q ss_pred cccceeecCCCCeEEeeec-CCeEEEeeCCccccccccccccceeecCC-CCEEEEEEccCCCEEEEEeC---CCcEEEE
Q 010037 237 RHGSATLKPGDHELTLGQR-MRRVRVHPVKKQSRELSSLYTGQEFLAHE-GSILTMKFSLDGQYLASGGE---DGTVRVW 311 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~-dg~I~vw~~~~~~~~~~~~~~~~~l~~H~-~~I~~l~fspdg~~LaSgs~---Dg~I~iW 311 (519)
.+.+++|+|||+.||.++. +|+++||++..+.. +.+..|. ..|..+.|+|| +++++++. +...+||
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~--------~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET--------VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE--------EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCc--------EeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 3566899999999999877 99999999743221 2234455 68999999999 77887765 5567777
Q ss_pred eccc--CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCC
Q 010037 312 KVIE--HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (519)
Q Consensus 312 d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (519)
.+.. ......+... .......+.++....++..... + ...+|+... .....+..+..
T Consensus 94 ~~~~~~~g~~~~l~~~-~~~~~~~~s~dg~~~~~~s~~~--------------~-~~~l~d~~~-----g~~~~l~~~~~ 152 (582)
T 3o4h_A 94 KVNTSRPGEEQRLEAV-KPMRILSGVDTGEAVVFTGATE--------------D-RVALYALDG-----GGLRELARLPG 152 (582)
T ss_dssp EEETTSTTCCEECTTS-CSBEEEEEEECSSCEEEEEECS--------------S-CEEEEEEET-----TEEEEEEEESS
T ss_pred EEeccCCCccccccCC-CCceeeeeCCCCCeEEEEecCC--------------C-CceEEEccC-----CcEEEeecCCC
Confidence 6644 2211122111 1223445555554433322111 1 111332211 12222333333
Q ss_pred CeeEEEEcCCC-eEEEEeCC----CcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCC--eEEEEEcCCCc
Q 010037 390 EVLDLSWSKNG-FLLSSSAD----KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDG--KVRIWEVRRCQ 462 (519)
Q Consensus 390 ~V~~l~~sp~~-~L~sgs~D----g~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg--~V~iwd~~~~~ 462 (519)
.+++|+|+| +|++++.+ ..|++||+.+++......|...+..++|+| |+++|+++..++ .|++||+.+++
T Consensus 153 --~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 153 --FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp --CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCC
T ss_pred --ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCc
Confidence 889999999 88877776 789999999998776666888999999999 999999888898 89999999988
Q ss_pred EEeeccCCCceEEEE--------EeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 463 VVDYTDIREIVSAVC--------YCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 463 ~~~~~~~~~~V~~v~--------~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
......+...+..++ |+|||.++++++.+|.+++|++ +++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 230 VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp EEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred EEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 775555666666666 9999988999999999999999 55543
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.73 E-value=1.4e-15 Score=150.57 Aligned_cols=236 Identities=11% Similarity=0.110 Sum_probs=158.9
Q ss_pred eecCCCCe-EEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeC-CCcEEEEecccCee-
Q 010037 242 TLKPGDHE-LTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE-DGTVRVWKVIEHER- 318 (519)
Q Consensus 242 ~~sp~g~~-lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~-Dg~I~iWd~~~~~~- 318 (519)
.|.+++.+ ++++..++.|.+||....... ..+..+...+ .++|+|+|++|++++. ++.|.+||+.+++.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEIL-------NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEE-------EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccccee-------eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 45555555 677888999999998754432 2234455566 9999999997776665 89999999998886
Q ss_pred eceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcC
Q 010037 319 LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSK 398 (519)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp 398 (519)
...+........++.+.++....+ .... ......+.+|+..... .+..+.. ...+.+++|+|
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~--~~~~-----------~~~~~~i~v~d~~~~~----~~~~~~~-~~~~~~~~~sp 137 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAV--TVTG-----------LNHPFNMQSYSFLKNK----FISTIPI-PYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEE--ECCC-----------SSSSCEEEEEETTTTE----EEEEEEC-CTTEEEEEECT
T ss_pred EEecccCCCCccceEECCCCCEEE--EecC-----------CCCcccEEEEECCCCC----eEEEEEC-CCCccceEECC
Confidence 555555444433355554432111 1110 0011156666654322 2333333 44568999999
Q ss_pred CC-eEE-EEeCCCc-EEEEECCCCeEE-----EEecCCCcEEEEEEeeCCCCEEE-EEeCCCeEEEEEcCCCcE---Eee
Q 010037 399 NG-FLL-SSSADKT-VRLWQVGIDRCL-----RVFSHNNYVTSVAFNPVDDNYFI-SGSIDGKVRIWEVRRCQV---VDY 466 (519)
Q Consensus 399 ~~-~L~-sgs~Dg~-V~lWdl~~~~~~-----~~~~h~~~V~~v~fsp~d~~~l~-sgs~Dg~V~iwd~~~~~~---~~~ 466 (519)
+| +|+ +...++. |.+|++.....+ ..+.....+..++|+| ++++++ ++..++.|++||+.+++. +..
T Consensus 138 dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~ 216 (331)
T 3u4y_A 138 NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNA 216 (331)
T ss_dssp TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeee
Confidence 99 454 4556688 999998764332 3334566789999999 888555 455689999999998887 655
Q ss_pred ccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCCee
Q 010037 467 TDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGMQI 504 (519)
Q Consensus 467 ~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~~l 504 (519)
......+..++|+|||++|+++. .++.|.+||+.++++
T Consensus 217 ~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 217 VGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred ccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 55567788999999999777665 477899999999887
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=4e-17 Score=179.65 Aligned_cols=200 Identities=11% Similarity=0.062 Sum_probs=150.9
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCC---CEEEEEEccCCCEEEEEeCC---------
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG---SILTMKFSLDGQYLASGGED--------- 305 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~---~I~~l~fspdg~~LaSgs~D--------- 305 (519)
..+++|+|+|+++++ +.||+|++|+...+... +.+.+|.. .|.+++|||||++|++++.+
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~-------~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTST-------VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE-------EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE-------EEeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence 345799999998776 68999999998755432 23445554 49999999999999999875
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
+.|.+||+.+++.. .+ ....
T Consensus 91 ~~i~~~d~~~~~~~-~l-----------------------------------------------------------~~~~ 110 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQ-SL-----------------------------------------------------------DPPE 110 (723)
T ss_dssp SEEEEEESSSCCCE-EC-----------------------------------------------------------CCTT
T ss_pred eeEEEEECCCCceE-ec-----------------------------------------------------------cCCc
Confidence 67889998776531 11 1112
Q ss_pred ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCc------------------EEEEEEeeCCCCEEE
Q 010037 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNY------------------VTSVAFNPVDDNYFI 445 (519)
Q Consensus 386 ~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~------------------V~~v~fsp~d~~~l~ 445 (519)
+|...+..++|+|+| .|+.++. +.|++||+.+++..+... +... +.+++|+| ++++|+
T Consensus 111 ~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la 188 (723)
T 1xfd_A 111 VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLA 188 (723)
T ss_dssp CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEE
T ss_pred cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEE
Confidence 355568899999999 8888876 799999999988776654 2322 37899999 999999
Q ss_pred EEeCCC----------------------------------eEEEEEcCCCcE-EeeccC------CCceEEEEEeeCCCE
Q 010037 446 SGSIDG----------------------------------KVRIWEVRRCQV-VDYTDI------REIVSAVCYCPDGKG 484 (519)
Q Consensus 446 sgs~Dg----------------------------------~V~iwd~~~~~~-~~~~~~------~~~V~~v~~spdg~~ 484 (519)
+++.|+ .|++||+.+++. ..+..+ ...+..++|+|||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~ 268 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV 268 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeE
Confidence 987653 799999998875 334332 567899999999998
Q ss_pred EEEEecC----CeEEEEECCCCeeeec
Q 010037 485 GIVGTMT----GNCRFYDIKGMQIFDL 507 (519)
Q Consensus 485 l~sgs~d----g~v~iwdl~~~~l~~~ 507 (519)
|++.... ..|++||+.++++..+
T Consensus 269 l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 269 AVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 8776543 5799999998876543
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=1.3e-15 Score=150.88 Aligned_cols=228 Identities=12% Similarity=0.151 Sum_probs=147.1
Q ss_pred eEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC-CcEEEEecc--cCee--eceee
Q 010037 249 ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED-GTVRVWKVI--EHER--LDGFD 323 (519)
Q Consensus 249 ~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D-g~I~iWd~~--~~~~--~~~~~ 323 (519)
.+++++.++.|++|++..... .. .. ....|...+.+++|+|+|++|++++.+ +.|++|++. ++.. +..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~-~~---~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGA-LT---LT-QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC-EE---EE-EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCCCc-EE---Ee-eeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc
Confidence 344457899999999863111 11 11 123477789999999999999998886 999999997 4442 23333
Q ss_pred ccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eE
Q 010037 324 VQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FL 402 (519)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L 402 (519)
... .+..+.+.++... ++... ..++.+.+|+... ....+.+..+.. ...+.+++|+|++ +|
T Consensus 82 ~~~-~~~~~~~s~dg~~-l~~~~--------------~~~~~i~~~d~~~-~~~~~~~~~~~~-~~~~~~~~~s~dg~~l 143 (343)
T 1ri6_A 82 LPG-SLTHISTDHQGQF-VFVGS--------------YNAGNVSVTRLED-GLPVGVVDVVEG-LDGCHSANISPDNRTL 143 (343)
T ss_dssp CSS-CCSEEEECTTSSE-EEEEE--------------TTTTEEEEEEEET-TEEEEEEEEECC-CTTBCCCEECTTSSEE
T ss_pred cCC-CCcEEEEcCCCCE-EEEEe--------------cCCCeEEEEECCC-CccccccccccC-CCCceEEEECCCCCEE
Confidence 323 4555555554422 21111 1233344444310 001122333333 3458999999999 77
Q ss_pred EEEe-CCCcEEEEECCC-CeEEEE----e--cCCCcEEEEEEeeCCCCEEEEE-eCCCeEEEEEcCC--CcE--E-eec-
Q 010037 403 LSSS-ADKTVRLWQVGI-DRCLRV----F--SHNNYVTSVAFNPVDDNYFISG-SIDGKVRIWEVRR--CQV--V-DYT- 467 (519)
Q Consensus 403 ~sgs-~Dg~V~lWdl~~-~~~~~~----~--~h~~~V~~v~fsp~d~~~l~sg-s~Dg~V~iwd~~~--~~~--~-~~~- 467 (519)
++++ .++.|++||+.+ ++.... + .....+.+++|+| ++++++++ ..++.|++|++.. ++. . ...
T Consensus 144 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~ 222 (343)
T 1ri6_A 144 WVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM 222 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEEC
T ss_pred EEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccc
Confidence 7776 899999999987 654322 2 2456789999999 88866554 4789999999954 432 1 111
Q ss_pred -c----CCCceEEEEEeeCCCEEEEE-ecCCeEEEEECC
Q 010037 468 -D----IREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIK 500 (519)
Q Consensus 468 -~----~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~ 500 (519)
. ....+..++|+|+|++|+++ ..++.|++||+.
T Consensus 223 ~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 223 MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 1 12356789999999988754 478999999998
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.72 E-value=3.1e-15 Score=148.97 Aligned_cols=226 Identities=13% Similarity=0.087 Sum_probs=159.5
Q ss_pred ccceeecCCCCeEEe-eecCCeEEEeeCCccccccccccccceeecCCC---------CEEEEEEccCCCEEEEEe--CC
Q 010037 238 HGSATLKPGDHELTL-GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG---------SILTMKFSLDGQYLASGG--ED 305 (519)
Q Consensus 238 ~~~~~~sp~g~~las-gs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~---------~I~~l~fspdg~~LaSgs--~D 305 (519)
...++|+|+++++++ +..++.|.+||....... ..+..+.. .+.++.|+|+|++|++++ .+
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK-------GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE-------EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE-------EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 345799999996554 556799999998754421 12222221 278999999999877776 47
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
+.|.+||+.+++....+......+..+.+.++... ++. ...++.+.+|+...... +..+.
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~---------------~~~~~~i~~~d~~~~~~----~~~~~ 223 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR-LYT---------------TNADGELITIDTADNKI----LSRKK 223 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE-EEE---------------ECTTSEEEEEETTTTEE----EEEEE
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCE-EEE---------------EcCCCeEEEEECCCCeE----EEEEE
Confidence 89999999999888777644444556666554432 111 11234455555443222 22222
Q ss_pred ----ccCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe-CCCeEEEEEc
Q 010037 386 ----GHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEV 458 (519)
Q Consensus 386 ----~h~~~V~~l~~sp~~-~L~sgs-~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs-~Dg~V~iwd~ 458 (519)
++...+..++|+|++ +|+.++ .++.|.+||+.+++.+..+..... ..++|+| ++++++++. .++.|.+||+
T Consensus 224 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~-dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNP-ARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEET-TTTEEEEEETTTTEEEEEET
T ss_pred cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECC-CCCEEEEEECCCCeEEEEEC
Confidence 355678899999999 555554 559999999999999888874333 5799999 888555544 6899999999
Q ss_pred CCCcEEeeccCCCceEEEEEeeCCCEEEEEecCC
Q 010037 459 RRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTG 492 (519)
Q Consensus 459 ~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg 492 (519)
.+++.+........+..++|+|||++|+++..++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 302 KSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred CCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 9999887666667889999999999888877664
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.70 E-value=1.5e-15 Score=167.68 Aligned_cols=250 Identities=9% Similarity=0.081 Sum_probs=168.0
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
.+.+++|+|||++|++++. +.|++|++...... ....+..|...+..++|+|||++||.++ ++.|++||+.++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA-----AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 4567899999999999886 99999999764100 1123566888999999999999999987 469999999888
Q ss_pred eeeceeeccCC----------------CCceEEEeecCCCCeEEeeccCCceee---------------e-eeeccC--C
Q 010037 317 ERLDGFDVQDT----------------DPSCLYFTINHLSQLIPIDVDKEKIDK---------------T-KSLRKS--S 362 (519)
Q Consensus 317 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~s--~ 362 (519)
+.......... ....+.|+++....++... +...... . ....+. .
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~-d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI-DESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE-ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE-cCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 76543332221 1355677776654433322 1110000 0 000011 1
Q ss_pred CeeEEEeCCcc-ccccccceeEe--eccCCCeeEEEEcCCC-eEEEEeC-----CCcEEEEECCCCeEEEEec-CC-C--
Q 010037 363 DLTCVVLPPKV-FRLLEKPLHEF--QGHSSEVLDLSWSKNG-FLLSSSA-----DKTVRLWQVGIDRCLRVFS-HN-N-- 429 (519)
Q Consensus 363 ~~~~~~~~~~~-~~~~~~~~~~~--~~h~~~V~~l~~sp~~-~L~sgs~-----Dg~V~lWdl~~~~~~~~~~-h~-~-- 429 (519)
...+.+|+... .. ..... ..|...+..++| |+| +|+.++. +..|++||+.++++...+. +. .
T Consensus 262 ~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 262 QVKLGVISPAEQAQ----TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEEEECSSTTCC----CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCCc----eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcC
Confidence 22455555543 22 11111 147788999999 999 7776553 5789999999998887775 22 2
Q ss_pred -cEEEEEEeeCCCCEEEEEeCCCeEEEEEcC-CCcEEeeccCCCceEEE-EEeeCCCEEEE-EecCC--eEEEEECC
Q 010037 430 -YVTSVAFNPVDDNYFISGSIDGKVRIWEVR-RCQVVDYTDIREIVSAV-CYCPDGKGGIV-GTMTG--NCRFYDIK 500 (519)
Q Consensus 430 -~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~-~~~~~~~~~~~~~V~~v-~~spdg~~l~s-gs~dg--~v~iwdl~ 500 (519)
.+..++|+| +++++++++.||.++||.+. ++....+..+...|..+ +|+|||+.|+. ++.++ .++||++.
T Consensus 337 ~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 337 PLHNSLRFLD-DGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CCCSCCEECT-TSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CcCCceEECC-CCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 456899999 88899999999988888765 33444566777788887 59999997765 44455 88999875
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=1.9e-14 Score=144.58 Aligned_cols=252 Identities=14% Similarity=0.098 Sum_probs=156.5
Q ss_pred ecccceeecCCCCeEEeeecC----CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe-CCCcEEE
Q 010037 236 DRHGSATLKPGDHELTLGQRM----RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG-EDGTVRV 310 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~d----g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs-~Dg~I~i 310 (519)
.....++|+|+|++|++++.+ +.|.+|++......+. ....+..+......+++ ++++|++++ .++.|.+
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~---~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH---LLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE---EEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE---EeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 344558999999999998875 8999999875321111 11223445566778888 888777776 5789999
Q ss_pred EecccCeeeceeec---cCC-----------CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccc-
Q 010037 311 WKVIEHERLDGFDV---QDT-----------DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFR- 375 (519)
Q Consensus 311 Wd~~~~~~~~~~~~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~- 375 (519)
|++.....+..+.. ... .+..+.+.++... ++... ..+..+.+|+.....
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~-l~~~~--------------~~~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY-LLADD--------------LGTDQIHKFNINPNAN 189 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE-EEEEE--------------TTTTEEEEEEECTTCC
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE-EEEEe--------------CCCCEEEEEEEcCCCC
Confidence 99975443322110 000 0122444433321 22111 112233333221110
Q ss_pred ------cccc--ceeEeeccCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECCCCeEE--EEec----CCCcEEEEEEeeC
Q 010037 376 ------LLEK--PLHEFQGHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVGIDRCL--RVFS----HNNYVTSVAFNPV 439 (519)
Q Consensus 376 ------~~~~--~~~~~~~h~~~V~~l~~sp~~-~L~sgs-~Dg~V~lWdl~~~~~~--~~~~----h~~~V~~v~fsp~ 439 (519)
+... .......+...+..++|+|+| +|++++ .++.|.+|++.+++.. ..+. +...+..++|+|
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp- 268 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP- 268 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-
Confidence 0000 011122344567899999999 676666 6899999999877553 2222 335578999999
Q ss_pred CCCEEEEEeCC--CeEEEEEcC--CCc--EEeeccCCCceEEEEEeeCCCEEEEEe-cCCeEEEE--ECCCCeeeecc
Q 010037 440 DDNYFISGSID--GKVRIWEVR--RCQ--VVDYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFY--DIKGMQIFDLS 508 (519)
Q Consensus 440 d~~~l~sgs~D--g~V~iwd~~--~~~--~~~~~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iw--dl~~~~l~~~~ 508 (519)
++++|+++..+ +.|.+|++. +++ .+........+..++|+|||++|++++ .++.|.+| |..++++..+.
T Consensus 269 dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 269 DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 99988776654 899999996 444 332222256788999999999988887 57889995 66678776654
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.68 E-value=1.7e-15 Score=173.87 Aligned_cols=242 Identities=6% Similarity=0.070 Sum_probs=175.3
Q ss_pred eeEeecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q 010037 232 ARIIDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVW 311 (519)
Q Consensus 232 ~~~~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iW 311 (519)
..|...+.++.|+++ .+++++..++.++||.+....... +.+..|. .+..++|+|||++|+.+ .++.|.+|
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~------~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~ 270 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL------RKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIF 270 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC------EECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEE
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc------eEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEe
Confidence 445566667889988 677778888999999875322111 2234444 46678999999999887 48999999
Q ss_pred ecccCeeeceeeccC-----------CCCceEEEe-ecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccc
Q 010037 312 KVIEHERLDGFDVQD-----------TDPSCLYFT-INHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (519)
Q Consensus 312 d~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 379 (519)
++.... +..+.... ..+..+.|+ ++....++.. ...+.+++... .
T Consensus 271 d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-----------------~~~i~~~~~~~-----~ 327 (1045)
T 1k32_A 271 NPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-----------------RGQAFIQDVSG-----T 327 (1045)
T ss_dssp CTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-----------------TTEEEEECTTS-----S
T ss_pred cCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-----------------cCEEEEEcCCC-----C
Confidence 994433 22332211 124455555 4432222111 23444554432 2
Q ss_pred ceeEeeccCC-CeeEEEEcCCC-eEEEEeCCCcEE-EEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 380 PLHEFQGHSS-EVLDLSWSKNG-FLLSSSADKTVR-LWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 380 ~~~~~~~h~~-~V~~l~~sp~~-~L~sgs~Dg~V~-lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
....+..|.. .+..++|+ +| .|+.++.+..|. +||+.+++......|...+..++|+| ++++|++++.++.|++|
T Consensus 328 ~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~ 405 (1045)
T 1k32_A 328 YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTV 405 (1045)
T ss_dssp BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECC-CCCEEEEECCCCeEEEE
Confidence 2334566777 89999999 88 888888888898 99999887665556778999999999 99999999999999999
Q ss_pred EcCCCcEEeec-cCCCceEEEEEeeCCCEEEEEecCC----------eEEEEECCCCeeeec
Q 010037 457 EVRRCQVVDYT-DIREIVSAVCYCPDGKGGIVGTMTG----------NCRFYDIKGMQIFDL 507 (519)
Q Consensus 457 d~~~~~~~~~~-~~~~~V~~v~~spdg~~l~sgs~dg----------~v~iwdl~~~~l~~~ 507 (519)
|+.+++..... .|...+..++|+|||++|++++.++ .|++||+.++++..+
T Consensus 406 d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 406 DLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp ETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred ECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 99999887654 7888899999999999999887754 899999998876554
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.67 E-value=1e-14 Score=160.04 Aligned_cols=250 Identities=14% Similarity=0.089 Sum_probs=159.3
Q ss_pred ecccceeecCCCCeEEeeecCCeEEEeeCCc-----ccccc-cccccccee------ecCCCCEEEEEEccCCCEEEEEe
Q 010037 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKK-----QSREL-SSLYTGQEF------LAHEGSILTMKFSLDGQYLASGG 303 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~-----~~~~~-~~~~~~~~l------~~H~~~I~~l~fspdg~~LaSgs 303 (519)
..+.+++|+|+|++|+++ .++.|++|++.. ..... ........+ ..+...+.++.|+|||++|++++
T Consensus 121 ~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp TCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred ccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 345668999999999995 789999999875 33211 000000000 01112258899999999999997
Q ss_pred ---------------------------------CCCcEEEEecccCeeeceeec--cCCCCceEEEeecCCCCeEEeecc
Q 010037 304 ---------------------------------EDGTVRVWKVIEHERLDGFDV--QDTDPSCLYFTINHLSQLIPIDVD 348 (519)
Q Consensus 304 ---------------------------------~Dg~I~iWd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 348 (519)
.+..|++||+.+++....... +...+..+.|+++....++. ..+
T Consensus 200 ~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~ 278 (706)
T 2z3z_A 200 MDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVA-EVN 278 (706)
T ss_dssp EECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEE-EEC
T ss_pred ECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEE-EeC
Confidence 446799999988875433321 12223345555544322221 111
Q ss_pred CCceeeeeeeccCCCeeEEEeCCccccccccceeEee--ccC---CCeeEEEEcC--CC-eEEEEeCCCcEEEEECC-CC
Q 010037 349 KEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ--GHS---SEVLDLSWSK--NG-FLLSSSADKTVRLWQVG-ID 419 (519)
Q Consensus 349 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~h~---~~V~~l~~sp--~~-~L~sgs~Dg~V~lWdl~-~~ 419 (519)
. ......+.+|+..... ....+. .+. ..+.+++|+| +| +|++++.|+.++||.+. .+
T Consensus 279 ~----------~~~~~~v~~~d~~~g~----~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 279 R----------AQNECKVNAYDAETGR----FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp T----------TSCEEEEEEEETTTCC----EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS
T ss_pred C----------CCCeeEEEEEECCCCc----eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC
Confidence 1 1122345555543320 111111 122 2347789999 99 88889999999999876 56
Q ss_pred eEEEEec-CCCcEEE-EEEeeCCCCEEEEEeC-CC----eEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecC-
Q 010037 420 RCLRVFS-HNNYVTS-VAFNPVDDNYFISGSI-DG----KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMT- 491 (519)
Q Consensus 420 ~~~~~~~-h~~~V~~-v~fsp~d~~~l~sgs~-Dg----~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~d- 491 (519)
..+..+. +...+.. ++|+| +++.|+.++. ++ .|..||+.+++...+ .+...+..++|+|||++|+....+
T Consensus 345 ~~~~~l~~~~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~spdg~~l~~~~~~~ 422 (706)
T 2z3z_A 345 RLIRQVTKGEWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDIKGGKTKDL-TPESGMHRTQLSPDGSAIIDIFQSP 422 (706)
T ss_dssp CEEEECCCSSSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEETTCCCCEES-CCSSSEEEEEECTTSSEEEEEEECS
T ss_pred CEEEecCCCCeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCCCceec-cCCCceEEEEECCCCCEEEEEecCC
Confidence 6666664 6667876 89999 8877765544 44 677778877764433 366778999999999998876544
Q ss_pred ---CeEEEEECCCCe
Q 010037 492 ---GNCRFYDIKGMQ 503 (519)
Q Consensus 492 ---g~v~iwdl~~~~ 503 (519)
+.|++||+.+++
T Consensus 423 ~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 423 TVPRKVTVTNIGKGS 437 (706)
T ss_dssp SCSCEEEEEESSSCE
T ss_pred CCCcEEEEEECCCCe
Confidence 569999999887
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.67 E-value=1.4e-15 Score=174.54 Aligned_cols=195 Identities=8% Similarity=0.058 Sum_probs=162.6
Q ss_pred ecccceeec-CCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCC-CEEEEEEccCCCEEEEEeCCCcEE-EEe
Q 010037 236 DRHGSATLK-PGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG-SILTMKFSLDGQYLASGGEDGTVR-VWK 312 (519)
Q Consensus 236 ~~~~~~~~s-p~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~-~I~~l~fspdg~~LaSgs~Dg~I~-iWd 312 (519)
..+.+++|+ |+|++|++++ ++.|.+|+...... ..+..|.. .+..++|+ ||+.|++++.++.|. +|+
T Consensus 296 ~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d 365 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV--------LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYD 365 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE--------EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEE
T ss_pred cccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce--------EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEE
Confidence 356779999 9999999987 88999999875432 12456777 89999999 999999999887777 888
Q ss_pred cccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCee
Q 010037 313 VIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (519)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 392 (519)
+.+++. ..+.+|...+.
T Consensus 366 ~~~~~~---------------------------------------------------------------~~l~~~~~~~~ 382 (1045)
T 1k32_A 366 YRTGKA---------------------------------------------------------------EKFEENLGNVF 382 (1045)
T ss_dssp TTTCCE---------------------------------------------------------------EECCCCCCSEE
T ss_pred CCCCCc---------------------------------------------------------------eEecCCcccee
Confidence 765431 11225667889
Q ss_pred EEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCEEEEEeCCC----------eEEEEEcCC
Q 010037 393 DLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGSIDG----------KVRIWEVRR 460 (519)
Q Consensus 393 ~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~Dg----------~V~iwd~~~ 460 (519)
.++|+|+| +|++++.++.|++||+.+++....+ .|...+.+++|+| ++++|++++.++ .|++||+.+
T Consensus 383 ~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 99999999 9999999999999999999988887 5888999999999 999998887654 899999999
Q ss_pred CcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 461 CQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 461 ~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
++...+..+...+..++|+|||++|++++.++...+|+.....+
T Consensus 462 g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~ 505 (1045)
T 1k32_A 462 RKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNF 505 (1045)
T ss_dssp TEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCE
T ss_pred CcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccc
Confidence 98777888888899999999999999999988888898765443
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.67 E-value=6.4e-15 Score=161.98 Aligned_cols=251 Identities=8% Similarity=0.063 Sum_probs=162.3
Q ss_pred ccceeecCCCCeEEeeecC---------CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 238 HGSATLKPGDHELTLGQRM---------RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~d---------g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
+.+++|+|||++|++++.+ +.|++|++..+... .+ ....+|...+..++|||||++||.++. +.|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~l---~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i 136 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ--SL---DPPEVSNAKLQYAGWGPKGQQLIFIFE-NNI 136 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE--EC---CCTTCCSCCCSBCCBCSSTTCEEEEET-TEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE--ec---cCCccccccccccEECCCCCEEEEEEC-CeE
Confidence 5678999999999998764 78899999865431 11 112346666889999999999999886 799
Q ss_pred EEEecccCeeeceeeccCCCC------------------ceEEEeecCCCCeEEeeccCCceeeeee-------------
Q 010037 309 RVWKVIEHERLDGFDVQDTDP------------------SCLYFTINHLSQLIPIDVDKEKIDKTKS------------- 357 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 357 (519)
++|++.+++.......+.... ..+.|++++...++... +.........
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI-NDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE-ECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE-CCCccceEEeeccCCcCCCccee
Confidence 999998887655443322222 45667766644333322 1111100000
Q ss_pred --e--cc--CCCeeEEEeCCccccccccceeEeec------cCCCeeEEEEcCCC-eEEEEeC----CCcEEEEECCCCe
Q 010037 358 --L--RK--SSDLTCVVLPPKVFRLLEKPLHEFQG------HSSEVLDLSWSKNG-FLLSSSA----DKTVRLWQVGIDR 420 (519)
Q Consensus 358 --~--~~--s~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~V~~l~~sp~~-~L~sgs~----Dg~V~lWdl~~~~ 420 (519)
. .+ .....+.+|+..... ....+.. |...+..++|+|+| +|++.+. +..|++||+.+++
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~~~~~----~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGLNGPT----HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSC----CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred ccCCCCCCCCCeeEEEEEECCCCc----eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 0 00 112355666554322 1233333 36678999999999 6655543 3679999999998
Q ss_pred EEEEec--CCCcEE----EEEEeeCCCCEEEE--EeCCC------eEEEEE-cCCCc---EEeeccCCCceEE-EEEeeC
Q 010037 421 CLRVFS--HNNYVT----SVAFNPVDDNYFIS--GSIDG------KVRIWE-VRRCQ---VVDYTDIREIVSA-VCYCPD 481 (519)
Q Consensus 421 ~~~~~~--h~~~V~----~v~fsp~d~~~l~s--gs~Dg------~V~iwd-~~~~~---~~~~~~~~~~V~~-v~~spd 481 (519)
+...+. +...+. .++|+| +++.|+. +..++ .|.+|| ..+++ ...+......+.. ++|+||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spd 370 (723)
T 1xfd_A 292 CTKKHEDESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEK 370 (723)
T ss_dssp EEEEEEEECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETT
T ss_pred ceEEEEeccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCC
Confidence 877654 444443 889999 8886654 55677 577777 45555 4444444444554 699999
Q ss_pred CCEEEEEecC---CeEEEEECC
Q 010037 482 GKGGIVGTMT---GNCRFYDIK 500 (519)
Q Consensus 482 g~~l~sgs~d---g~v~iwdl~ 500 (519)
|+.|+..+.+ +.++||++.
T Consensus 371 g~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 371 GNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp TTEEEEEESSSCTTCCEEEEEC
T ss_pred CCEEEEEEcCCCCcceEEEEEe
Confidence 9999876655 789999875
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.66 E-value=8.5e-15 Score=160.70 Aligned_cols=258 Identities=12% Similarity=0.103 Sum_probs=168.1
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEeccc-
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE- 315 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~- 315 (519)
.+.+++|+|+ ..++.+ .++.|++|++..... ..+..|...+.+++|+|||++||++ .|+.|++|++.+
T Consensus 83 ~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~--------~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~ 151 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKV--------TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKL 151 (706)
T ss_dssp CCEEEEETTT-TEEEEE-ETTEEEEEETTTTEE--------EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCT
T ss_pred CceeEEECCC-CeEEEE-ECCEEEEEECCCCce--------EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcc
Confidence 4567899999 666555 459999999875432 1244567788899999999999985 689999999988
Q ss_pred ----CeeeceeeccCCC--------------CceEEEeecCCCCeEEeeccCCceeeeee----------------e--c
Q 010037 316 ----HERLDGFDVQDTD--------------PSCLYFTINHLSQLIPIDVDKEKIDKTKS----------------L--R 359 (519)
Q Consensus 316 ----~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~ 359 (519)
++........... ...+.|+++....++.. .+......... . .
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~-~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR-MDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE-EECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE-ECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 6654333222221 35667776654433322 11111000000 0 0
Q ss_pred cCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCC-----cEEEEECCCC-eEEEEec--CCC-
Q 010037 360 KSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADK-----TVRLWQVGID-RCLRVFS--HNN- 429 (519)
Q Consensus 360 ~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg-----~V~lWdl~~~-~~~~~~~--h~~- 429 (519)
......+.+|+....... .+.....|...+.+++|+|+| +|++++.++ .|++||+.++ ....... +..
T Consensus 231 ~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTV--YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHY 308 (706)
T ss_dssp CCCEEEEEEEETTTTEEE--ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSC
T ss_pred CCCeeEEEEEECCCCceE--eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCe
Confidence 113455666665432211 111112467789999999999 788877775 8999999998 4433332 322
Q ss_pred --cEEEEEEee-CCCCEEEEEeCCCeEEEEEcC-CCcEE-eeccCCCceEE-EEEeeCCCEEEEEec-CC----eEEEEE
Q 010037 430 --YVTSVAFNP-VDDNYFISGSIDGKVRIWEVR-RCQVV-DYTDIREIVSA-VCYCPDGKGGIVGTM-TG----NCRFYD 498 (519)
Q Consensus 430 --~V~~v~fsp-~d~~~l~sgs~Dg~V~iwd~~-~~~~~-~~~~~~~~V~~-v~~spdg~~l~sgs~-dg----~v~iwd 498 (519)
.+.+++|+| .+++++++++.|+.++||.+. ++..+ .+..+...+.. ++|+|||+.|+.++. ++ .|..||
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred ECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 246789998 256789999999999999876 44443 56666667776 799999998876554 44 678888
Q ss_pred CCCCeeeecc
Q 010037 499 IKGMQIFDLS 508 (519)
Q Consensus 499 l~~~~l~~~~ 508 (519)
+.++++..+.
T Consensus 389 ~~~~~~~~l~ 398 (706)
T 2z3z_A 389 IKGGKTKDLT 398 (706)
T ss_dssp TTCCCCEESC
T ss_pred cCCCCceecc
Confidence 8877655443
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.63 E-value=1.2e-15 Score=167.83 Aligned_cols=195 Identities=12% Similarity=0.114 Sum_probs=143.0
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCC---CEEEEEEccCCCEEEEEeC---------CCc
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG---SILTMKFSLDGQYLASGGE---------DGT 307 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~---~I~~l~fspdg~~LaSgs~---------Dg~ 307 (519)
.++|+|+|.+++++ .++.|++|+...+... +.+.+|.. .|.+++|||||++||+++. |+.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~-------~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSY-------TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEE-------EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEE-------EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 47899999666555 6999999998765432 12333332 4889999999999999876 789
Q ss_pred EEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeecc
Q 010037 308 VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH 387 (519)
Q Consensus 308 I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h 387 (519)
|++||+.+++.+... .+
T Consensus 92 i~~~d~~~g~~~~~~------------------------------------------------------------~l--- 108 (719)
T 1z68_A 92 YYIYDLSNGEFVRGN------------------------------------------------------------EL--- 108 (719)
T ss_dssp EEEEETTTTEECCSS------------------------------------------------------------CC---
T ss_pred EEEEECCCCccccce------------------------------------------------------------ec---
Confidence 999999887641100 00
Q ss_pred CCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcE-----------------EEEEEeeCCCCEEEEE
Q 010037 388 SSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYV-----------------TSVAFNPVDDNYFISG 447 (519)
Q Consensus 388 ~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V-----------------~~v~fsp~d~~~l~sg 447 (519)
...+..++|+|+| .|+.+. ++.|++|++.+++..+... +...| .+++|+| |+++|+++
T Consensus 109 ~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~ 186 (719)
T 1z68_A 109 PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYA 186 (719)
T ss_dssp CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEE
T ss_pred CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEE
Confidence 1347789999999 777775 7899999999887765432 22223 4899999 99999998
Q ss_pred eCCC----------------------------------eEEEEEcCCCcEE---e------eccCCCceEEEEEeeCCCE
Q 010037 448 SIDG----------------------------------KVRIWEVRRCQVV---D------YTDIREIVSAVCYCPDGKG 484 (519)
Q Consensus 448 s~Dg----------------------------------~V~iwd~~~~~~~---~------~~~~~~~V~~v~~spdg~~ 484 (519)
+.|. .|++||+.+++.. . +..+...+..++|+||+++
T Consensus 187 ~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~ 266 (719)
T 1z68_A 187 EFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERV 266 (719)
T ss_dssp EEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEE
T ss_pred EECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeE
Confidence 8652 7899999987642 2 2357778999999999887
Q ss_pred EEEEecC----CeEEEEE----CCCCeeeec
Q 010037 485 GIVGTMT----GNCRFYD----IKGMQIFDL 507 (519)
Q Consensus 485 l~sgs~d----g~v~iwd----l~~~~l~~~ 507 (519)
+++.... ..|.+|| +.+++...+
T Consensus 267 ~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 267 CLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp EEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred EEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 7775433 2488999 887776544
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.62 E-value=1.1e-14 Score=147.51 Aligned_cols=255 Identities=10% Similarity=-0.006 Sum_probs=157.5
Q ss_pred eeecCCCCeEEeeec-CC--eEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe
Q 010037 241 ATLKPGDHELTLGQR-MR--RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 241 ~~~sp~g~~lasgs~-dg--~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~ 317 (519)
.+|+|||++|+.++. +| .|.+|+....... +...+|...+..+.|+|||++|+.++.++.|++||+.+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~-------~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT-------QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE-------ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE-------EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 689999999998877 67 4777787644321 1223455555567899999999999999999999999987
Q ss_pred eeceeeccCCCCceEEEeecCCCCeEE-eeccCCceee-------eeeeccCCCeeEEEeCCccccccccceeEeeccCC
Q 010037 318 RLDGFDVQDTDPSCLYFTINHLSQLIP-IDVDKEKIDK-------TKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (519)
.......+........+........+. .......... ...........+.+++.... ....+..+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-----~~~~l~~~~~ 188 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG-----ESTVILQENQ 188 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC-----CEEEEEEESS
T ss_pred ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC-----ceEEeecCCc
Confidence 665554443322222222222222221 1111000000 00112233455666655432 2344556777
Q ss_pred CeeEEEEcC-CC-eEEEEeCC------CcEEEEECCCCeEEEEecCC--CcEEEEEEeeCCCCEEEEEeC-CC----eEE
Q 010037 390 EVLDLSWSK-NG-FLLSSSAD------KTVRLWQVGIDRCLRVFSHN--NYVTSVAFNPVDDNYFISGSI-DG----KVR 454 (519)
Q Consensus 390 ~V~~l~~sp-~~-~L~sgs~D------g~V~lWdl~~~~~~~~~~h~--~~V~~v~fsp~d~~~l~sgs~-Dg----~V~ 454 (519)
.+..++|+| +| .|+.+..+ ..|.++|+..+.......+. ..+..++|+| +++.|+..+. ++ .|+
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVP-DGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECT-TSSCEEEEEEETTCCCEEEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECC-CCCEEEEEecCCCCCcceEE
Confidence 899999999 88 77766653 37888888776554444444 3688899999 8886655443 22 399
Q ss_pred EEEcCCCcEEeeccCCCc------eEEEEEeeCCCEEEEE---------ecCCeEEEEECCCCeeeecc
Q 010037 455 IWEVRRCQVVDYTDIREI------VSAVCYCPDGKGGIVG---------TMTGNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 455 iwd~~~~~~~~~~~~~~~------V~~v~~spdg~~l~sg---------s~dg~v~iwdl~~~~l~~~~ 508 (519)
+||+.+++...+...... ...++|+|||+.|+.. ..+..|++||+.++++..+.
T Consensus 268 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 268 SADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp EECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE
T ss_pred EEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec
Confidence 999999875433222210 1123799999988864 44668999999998876553
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.62 E-value=2e-14 Score=144.98 Aligned_cols=242 Identities=10% Similarity=0.039 Sum_probs=152.0
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCC-ccccccccccccceeecCCCCEEEEEEccCCCE--EEEEe-----------
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVK-KQSRELSSLYTGQEFLAHEGSILTMKFSLDGQY--LASGG----------- 303 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~-~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~--LaSgs----------- 303 (519)
+..++|+|+|++|++++.+ .|.+|++. .+... .. .....+ +.+.+++|+|+|++ ++++.
T Consensus 42 ~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~--~~---~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIV--HE---ASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEE--EE---EEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CcEEEECCCCCEEEEEccc-eEEEEEECCCCCEE--Ee---eEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 4458999999999988887 99999986 33211 00 011111 23556899999994 55553
Q ss_pred --CCCcEEEEecc-cCeeeceeec----cCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCc-ccc
Q 010037 304 --EDGTVRVWKVI-EHERLDGFDV----QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPK-VFR 375 (519)
Q Consensus 304 --~Dg~I~iWd~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~ 375 (519)
.+|.+.+|++. .++....+.. ....+..+.+.++... ++..... ...+.+|+.. ...
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~--------------~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY-LYSADLT--------------ANKLWTHRKLASGE 179 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETT--------------TTEEEEEEECTTSC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-EEEEcCC--------------CCEEEEEEECCCCC
Confidence 68999999997 4554433332 2233444555544321 2222211 2233333332 111
Q ss_pred ccccceeEee--ccCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECC--CCeEE---EEec--------CCC------cEE
Q 010037 376 LLEKPLHEFQ--GHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVG--IDRCL---RVFS--------HNN------YVT 432 (519)
Q Consensus 376 ~~~~~~~~~~--~h~~~V~~l~~sp~~-~L~sgs-~Dg~V~lWdl~--~~~~~---~~~~--------h~~------~V~ 432 (519)
+ ..+..+. .|...+..++|+|+| +|++++ .+++|.+|++. +++.. ..+. |.. .+.
T Consensus 180 ~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 180 V--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp E--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred E--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 1 1122233 245678999999999 777766 47899999865 55543 2221 121 589
Q ss_pred EEE-EeeCCCCEEEEEeCC-C-----eEEEEEcC-CCcEEe----eccCCCceEEEEEee---CCCEEEEEecC-CeEEE
Q 010037 433 SVA-FNPVDDNYFISGSID-G-----KVRIWEVR-RCQVVD----YTDIREIVSAVCYCP---DGKGGIVGTMT-GNCRF 496 (519)
Q Consensus 433 ~v~-fsp~d~~~l~sgs~D-g-----~V~iwd~~-~~~~~~----~~~~~~~V~~v~~sp---dg~~l~sgs~d-g~v~i 496 (519)
.++ |+| ++++|+++..+ . .|.+|++. ++++.. ...+...+..++|+| ||++|++++.+ +.|.+
T Consensus 258 ~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 258 DVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp EEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred cEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEE
Confidence 999 999 89988776643 2 89999996 566543 222445567899999 89999998875 89999
Q ss_pred EECCCCee
Q 010037 497 YDIKGMQI 504 (519)
Q Consensus 497 wdl~~~~l 504 (519)
|++....+
T Consensus 337 ~~~~~~~l 344 (365)
T 1jof_A 337 YRWKDEFL 344 (365)
T ss_dssp EEEETTEE
T ss_pred EEEchhhC
Confidence 99977654
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.61 E-value=1.7e-14 Score=154.76 Aligned_cols=203 Identities=10% Similarity=-0.002 Sum_probs=135.6
Q ss_pred CCCCEEEEEEccCCCEEEEEeC-CCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccC
Q 010037 283 HEGSILTMKFSLDGQYLASGGE-DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKS 361 (519)
Q Consensus 283 H~~~I~~l~fspdg~~LaSgs~-Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 361 (519)
+..+|++++|+|||++||+++. ||+++||++.+++.......+...+....|+++ ..++...... +.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~----------g~ 87 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSK----------GA 87 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS--EEEEEEECST----------TS
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC--eEEEEeccCC----------CC
Confidence 3568999999999999999887 999999998666543322221122333333332 1122111100 00
Q ss_pred CCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeC
Q 010037 362 SDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPV 439 (519)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~ 439 (519)
....+..++. +. .+... .+.. ...+...+|+|++ .+++.+.++.+.|||+.++++.....+.. .+++|+|
T Consensus 88 ~~~~l~~~~~--~~-~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~sp- 159 (582)
T 3o4h_A 88 EQHALFKVNT--SR-PGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDI- 159 (582)
T ss_dssp CCEEEEEEET--TS-TTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEE-
T ss_pred cceEEEEEec--cC-CCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECC-
Confidence 1111222211 00 00111 1111 1223456777777 44455555556699999998877766554 8999999
Q ss_pred CCCEEEEEeCC----CeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCC--eEEEEECCCCeee
Q 010037 440 DDNYFISGSID----GKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTG--NCRFYDIKGMQIF 505 (519)
Q Consensus 440 d~~~l~sgs~D----g~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg--~v~iwdl~~~~l~ 505 (519)
+|++|++++.+ +.|++||+.+++...+..+...+..++|+|||+.|+++..+| .|++||+.+++..
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 99999988877 789999999998888888888999999999999999888888 8999999988765
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=1.7e-14 Score=159.44 Aligned_cols=244 Identities=11% Similarity=0.080 Sum_probs=157.5
Q ss_pred cceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCC-----CEEEEEEccCCCEEEEEeCC--------
Q 010037 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEG-----SILTMKFSLDGQYLASGGED-------- 305 (519)
Q Consensus 239 ~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~-----~I~~l~fspdg~~LaSgs~D-------- 305 (519)
.+++|+|+|.+++++ +|.|++|++..+... ..+.+|.. ....+.|||||++|+.++.+
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSS-------VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEE-------EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceE-------EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 357999999999886 999999998865532 12344432 33458999999999999876
Q ss_pred -CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccc-----ccc
Q 010037 306 -GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL-----LEK 379 (519)
Q Consensus 306 -g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~-----~~~ 379 (519)
+.+.+||+.+++... +..+........|++++...++.. +..+.+++...... .+.
T Consensus 91 ~~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-----------------~~~i~~~~~~~~~~~~lt~~g~ 152 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-----------------NNDIYVKIEPNLPSYRITWTGK 152 (740)
T ss_dssp EEEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-----------------TTEEEEESSTTSCCEECCSCCB
T ss_pred ceEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-----------------CCeEEEEECCCCceEEEcCCCC
Confidence 566799999988643 333334455566666654433321 12233333321110 011
Q ss_pred ceeEeeccC---------CCeeEEEEcCCC-eEEEEeCCC------------------------------------cEEE
Q 010037 380 PLHEFQGHS---------SEVLDLSWSKNG-FLLSSSADK------------------------------------TVRL 413 (519)
Q Consensus 380 ~~~~~~~h~---------~~V~~l~~sp~~-~L~sgs~Dg------------------------------------~V~l 413 (519)
....+.++. +....+.|+|+| .|+.++.|. +|++
T Consensus 153 ~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v 232 (740)
T 4a5s_A 153 EDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFV 232 (740)
T ss_dssp TTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred ccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEE
Confidence 111233333 223458999999 787765332 4888
Q ss_pred EECCC---C---eEEEEec------CCCcEEEEEEeeCCCCEEEEEeC----CCeEEEEEcCCCc----EE---ee--cc
Q 010037 414 WQVGI---D---RCLRVFS------HNNYVTSVAFNPVDDNYFISGSI----DGKVRIWEVRRCQ----VV---DY--TD 468 (519)
Q Consensus 414 Wdl~~---~---~~~~~~~------h~~~V~~v~fsp~d~~~l~sgs~----Dg~V~iwd~~~~~----~~---~~--~~ 468 (519)
||+.+ + +...... |...+..++|+| +++.++.... +..|++||+.+++ +. .. ..
T Consensus 233 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~ 311 (740)
T 4a5s_A 233 VNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS 311 (740)
T ss_dssp EETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC
T ss_pred EECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc
Confidence 99998 7 4444432 778899999999 8886665432 3479999999887 22 11 33
Q ss_pred CCCceE-----EEEEeeCCCEEE-EEec-CC--eEEEEECCCCeeeecccc
Q 010037 469 IREIVS-----AVCYCPDGKGGI-VGTM-TG--NCRFYDIKGMQIFDLSTT 510 (519)
Q Consensus 469 ~~~~V~-----~v~~spdg~~l~-sgs~-dg--~v~iwdl~~~~l~~~~~~ 510 (519)
+...|. .++|+|||+.|+ ..+. +| .|++||+.+++..++...
T Consensus 312 ~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g 362 (740)
T 4a5s_A 312 TTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG 362 (740)
T ss_dssp SSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS
T ss_pred CCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC
Confidence 444443 788999999877 6653 34 588899988877766544
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.59 E-value=2.7e-13 Score=136.04 Aligned_cols=237 Identities=13% Similarity=0.135 Sum_probs=143.6
Q ss_pred cCCCCeEEeee----cCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC----CcEEEEeccc
Q 010037 244 KPGDHELTLGQ----RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED----GTVRVWKVIE 315 (519)
Q Consensus 244 sp~g~~lasgs----~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D----g~I~iWd~~~ 315 (519)
.+...++++|+ .++.|.+|.+......+... ..+ |...+..++|+|+|++|++++.+ +.|.+|++..
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~---~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~ 84 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPL---SDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDK 84 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEE---EEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEET
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEe---ecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeC
Confidence 33444555653 45789999886433222211 122 66778889999999999999886 7999999876
Q ss_pred --Ceeec--eeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE--e-----
Q 010037 316 --HERLD--GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE--F----- 384 (519)
Q Consensus 316 --~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~----- 384 (519)
++... ........+..+.+ ....++.... .++.+.+|+............. .
T Consensus 85 ~~g~~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~--------------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~ 147 (361)
T 3scy_A 85 EKGTLHLLNTQKTMGADPCYLTT---NGKNIVTANY--------------SGGSITVFPIGQDGALLPASDVIEFKGSGP 147 (361)
T ss_dssp TTTEEEEEEEEECSSSCEEEEEE---CSSEEEEEET--------------TTTEEEEEEBCTTSCBCSCSEEEECCCCCS
T ss_pred CCCcEEEeeEeccCCCCcEEEEE---CCCEEEEEEC--------------CCCEEEEEEeCCCCcCcccceeEEccCCCC
Confidence 33222 22211222222222 2222222221 2233333332211110111110 0
Q ss_pred ---eccCCCeeEEEEcCCC-eEEEEe-CCCcEEEEECCCCe-------E-------EEEecCCCcEEEEEEeeCCCCEEE
Q 010037 385 ---QGHSSEVLDLSWSKNG-FLLSSS-ADKTVRLWQVGIDR-------C-------LRVFSHNNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 385 ---~~h~~~V~~l~~sp~~-~L~sgs-~Dg~V~lWdl~~~~-------~-------~~~~~h~~~V~~v~fsp~d~~~l~ 445 (519)
..+...+.+++|+|+| +|++++ .++.|++|++.... . .....+...+..++|+| ++++++
T Consensus 148 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~ 226 (361)
T 3scy_A 148 DKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAY 226 (361)
T ss_dssp CTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEE
T ss_pred CccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEE
Confidence 1123346889999999 565554 58999999887543 1 22233566789999999 898887
Q ss_pred EEe-CCCeEEEEEcCCCcEEe---e---ccCCCceEEEEEeeCCCEEEEEecC--CeEEEEECC--CCe
Q 010037 446 SGS-IDGKVRIWEVRRCQVVD---Y---TDIREIVSAVCYCPDGKGGIVGTMT--GNCRFYDIK--GMQ 503 (519)
Q Consensus 446 sgs-~Dg~V~iwd~~~~~~~~---~---~~~~~~V~~v~~spdg~~l~sgs~d--g~v~iwdl~--~~~ 503 (519)
+++ .++.|.+|++.++++.. . ..+...+..++|+|||++|+++..+ +.|.+|++. +++
T Consensus 227 v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 227 LINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp EEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred EEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 776 68999999998775431 1 2233457899999999998776654 889999985 454
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=1.3e-12 Score=126.66 Aligned_cols=240 Identities=10% Similarity=0.138 Sum_probs=155.6
Q ss_pred eecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEE-ccCCCEEEEEeC-CCcEEEEe
Q 010037 235 IDRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKF-SLDGQYLASGGE-DGTVRVWK 312 (519)
Q Consensus 235 ~~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~f-spdg~~LaSgs~-Dg~I~iWd 312 (519)
.....+++++|++.++++...++.|.+|+..... ...+.....-.+|...+..+++ .++++++++... ++.|++|+
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~--~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRF--KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCE--EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCCCcE--EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 3445568999999988888889999999976322 1111100001235567899999 467776666643 88999999
Q ss_pred cccCeeeceeeccC-CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee--ccCC
Q 010037 313 VIEHERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ--GHSS 389 (519)
Q Consensus 313 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~h~~ 389 (519)
.+++.+..+.... ..+..+.+.+. ..++... .....+..++.. .+.+..+. ++..
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~--g~l~v~~--------------~~~~~i~~~~~~-----g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNK--GRIIVVE--------------CKVMRVIIFDQN-----GNVLHKFGCSKHLE 164 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTT--SCEEEEE--------------TTTTEEEEECTT-----SCEEEEEECTTTCS
T ss_pred -CCCcEEEEecCccCCCceEEEEeCC--CCEEEEE--------------CCCCEEEEEcCC-----CCEEEEeCCCCccC
Confidence 5566554443221 12333333332 2233222 122344444432 12233332 3456
Q ss_pred CeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecC---CCcEEEEEEeeCCCCEEEEEeCCC-eEEEEEcCCCcEE
Q 010037 390 EVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSH---NNYVTSVAFNPVDDNYFISGSIDG-KVRIWEVRRCQVV 464 (519)
Q Consensus 390 ~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h---~~~V~~v~fsp~d~~~l~sgs~Dg-~V~iwd~~~~~~~ 464 (519)
.+.+|++++++ ++++...++.|++||.. ++.+..+.. ...+..|+++| +++++++...++ .|.+||.....+.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~~ 242 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLIS 242 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEEE
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEEE
Confidence 78999999999 66666778999999974 556666652 36789999999 889888888776 9999996543333
Q ss_pred eeccC--CCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 465 DYTDI--REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 465 ~~~~~--~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
.+..+ ...+.+++++|+|+++++ +.++.|++|++..
T Consensus 243 ~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 243 ALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 33332 234789999999986666 6799999999854
No 161
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.56 E-value=4.5e-13 Score=132.04 Aligned_cols=211 Identities=11% Similarity=0.085 Sum_probs=141.4
Q ss_pred cccceeecCCCCeEEeee------------cCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeC
Q 010037 237 RHGSATLKPGDHELTLGQ------------RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE 304 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs------------~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~ 304 (519)
.+..++|+|+|++++++. .++.|.+|+....... ..+.. ...+.+++|+|+|++|+++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~-------~~~~~-~~~~~~~~~s~dg~~l~~~-- 152 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR-------KAFEA-PRQITMLAWARDGSKLYGL-- 152 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE-------EEEEC-CSSCCCEEECTTSSCEEEE--
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE-------EEEeC-CCCcceeEECCCCCEEEEe--
Confidence 455689999999998886 5799999998754321 12222 3457889999999988888
Q ss_pred CCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeecc---------CCCeeEEEeCCcccc
Q 010037 305 DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRK---------SSDLTCVVLPPKVFR 375 (519)
Q Consensus 305 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------s~~~~~~~~~~~~~~ 375 (519)
++.|.+||+.+++....+....... ...+.++.... +................. .....+.+++.....
T Consensus 153 ~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 153 GRDLHVMDPEAGTLVEDKPIQSWEA-ETYAQPDVLAV-WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp SSSEEEEETTTTEEEEEECSTTTTT-TTBCCCBCCCC-CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred CCeEEEEECCCCcEeeeeeccccCC-CceeCCCccEE-eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 6899999999998776665443111 11233332211 111111110000000000 001134555554433
Q ss_pred ccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEE
Q 010037 376 LLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVR 454 (519)
Q Consensus 376 ~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~ 454 (519)
.. ...+..+...+.+++|+|++ +|+++ ++.|.+||+.+++.+..+.....+.+++|+| ++++|++++.++.|+
T Consensus 231 ~~---~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~ 304 (337)
T 1pby_B 231 MA---MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVST-DGSTVWLGGALGDLA 304 (337)
T ss_dssp EE---EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECT-TSCEEEEESBSSEEE
T ss_pred ce---EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECC-CCCEEEEEcCCCcEE
Confidence 21 23345566788899999999 77777 7999999999999998888777889999999 899999888899999
Q ss_pred EEEcCCCcEEe
Q 010037 455 IWEVRRCQVVD 465 (519)
Q Consensus 455 iwd~~~~~~~~ 465 (519)
+||+.+++.+.
T Consensus 305 v~d~~~~~~~~ 315 (337)
T 1pby_B 305 AYDAETLEKKG 315 (337)
T ss_dssp EEETTTCCEEE
T ss_pred EEECcCCcEEE
Confidence 99999988774
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.53 E-value=4.9e-13 Score=133.30 Aligned_cols=181 Identities=12% Similarity=0.192 Sum_probs=126.1
Q ss_pred cCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeC---CCcEEEEecccCeeeceeeccCCCCce
Q 010037 255 RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGE---DGTVRVWKVIEHERLDGFDVQDTDPSC 331 (519)
Q Consensus 255 ~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~---Dg~I~iWd~~~~~~~~~~~~~~~~~~~ 331 (519)
.++.|.+|.+......+... ....+...+..++|+|+|+ |++++. ++.|.+|++.++...
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~----~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~------------ 76 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTND----GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH------------ 76 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEE----EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE------------
T ss_pred CCCCEEEEEEcCCCCeEEEe----eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE------------
Confidence 45678888886433222211 2234556778899999999 555544 689999999665421
Q ss_pred EEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEe-CCC
Q 010037 332 LYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSS-ADK 409 (519)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs-~Dg 409 (519)
.+..+..+...+..++|+|++ +|++++ .++
T Consensus 77 ------------------------------------------------~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~ 108 (347)
T 3hfq_A 77 ------------------------------------------------KLNTVVAPGTPPAYVAVDEARQLVYSANYHKG 108 (347)
T ss_dssp ------------------------------------------------EEEEEEEESCCCSEEEEETTTTEEEEEETTTT
T ss_pred ------------------------------------------------EeeeeecCCCCCEEEEECCCCCEEEEEeCCCC
Confidence 022233456678899999999 777777 789
Q ss_pred cEEEEECCC-C--eEEEEecCC----------CcEEEEEEeeCCCCEEEEEeCCCeEEEEEcC-CCcEEe----eccCCC
Q 010037 410 TVRLWQVGI-D--RCLRVFSHN----------NYVTSVAFNPVDDNYFISGSIDGKVRIWEVR-RCQVVD----YTDIRE 471 (519)
Q Consensus 410 ~V~lWdl~~-~--~~~~~~~h~----------~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~-~~~~~~----~~~~~~ 471 (519)
.|.+|++.. + ..+..+.+. ..+.+++|+| +++++++...++.|++|++. ++++.. ......
T Consensus 109 ~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 109 TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 999999963 2 333443322 2488999999 88877777778999999998 555432 122334
Q ss_pred ceEEEEEeeCCCEEEE-EecCCeEEEEECCC
Q 010037 472 IVSAVCYCPDGKGGIV-GTMTGNCRFYDIKG 501 (519)
Q Consensus 472 ~V~~v~~spdg~~l~s-gs~dg~v~iwdl~~ 501 (519)
.+..++|+|||++|++ +..++.|++|++..
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 6788999999996666 55688999999873
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.52 E-value=2.6e-13 Score=149.18 Aligned_cols=251 Identities=10% Similarity=0.032 Sum_probs=158.7
Q ss_pred ccceeecCCCCeEEeeec---------CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcE
Q 010037 238 HGSATLKPGDHELTLGQR---------MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTV 308 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~---------dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I 308 (519)
+.+++|+|||++|++++. ++.|++|++..+..... ..+ ...+..++|||||++||.+. |+.|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-----~~l---~~~~~~~~~SPDG~~la~~~-~~~i 132 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-----NEL---PRPIQYLCWSPVGSKLAYVY-QNNI 132 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-----SCC---CSSBCCEEECSSTTCEEEEE-TTEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-----eec---CcccccceECCCCCEEEEEE-CCeE
Confidence 456899999999998876 78999999976543100 011 24688899999999999886 7899
Q ss_pred EEEecccCeeeceeeccCC------------------CCceEEEeecCCCCeEEeeccCCceeeee--------------
Q 010037 309 RVWKVIEHERLDGFDVQDT------------------DPSCLYFTINHLSQLIPIDVDKEKIDKTK-------------- 356 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 356 (519)
++|++.+++.......... ....+.|++++...++... +........
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~-d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF-NDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE-ECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE-CCCCCceEEeeccCCCCCcccee
Confidence 9999988775432211111 1135667766544333222 111100000
Q ss_pred ---ee--ccCCCeeEEEeCCcccccc----ccceeEeeccCCCeeEEEEcCCC-eEEEEeCC----CcEEEEE----CCC
Q 010037 357 ---SL--RKSSDLTCVVLPPKVFRLL----EKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD----KTVRLWQ----VGI 418 (519)
Q Consensus 357 ---~~--~~s~~~~~~~~~~~~~~~~----~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~D----g~V~lWd----l~~ 418 (519)
.. .......+.+|+....... -.....+.+|...+..++|+|++ ++++.... ..|.+|| +.+
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT 291 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence 00 0112235556665443221 00002234688889999999999 55554332 2488999 888
Q ss_pred CeEEEEe-----cCCCcEE-----EEEEeeCCCCEEE--EEeCCC--eEEEEEcCCCcEEeeccCCCceEEEEEeeCCCE
Q 010037 419 DRCLRVF-----SHNNYVT-----SVAFNPVDDNYFI--SGSIDG--KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKG 484 (519)
Q Consensus 419 ~~~~~~~-----~h~~~V~-----~v~fsp~d~~~l~--sgs~Dg--~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~ 484 (519)
+++...+ .|...+. .+.|+| +++.|+ +...+| .|.+||+.+++...+..+...+..+.+. +++.
T Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~ 369 (719)
T 1z68_A 292 WDCPKTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDS 369 (719)
T ss_dssp EECCGGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSE
T ss_pred CceEEEEecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCE
Confidence 7766554 3666666 889999 777544 344555 5777888887766666666678888777 8888
Q ss_pred EEEEecC-----CeEEEEECC
Q 010037 485 GIVGTMT-----GNCRFYDIK 500 (519)
Q Consensus 485 l~sgs~d-----g~v~iwdl~ 500 (519)
|+..+.+ +.+++|.+.
T Consensus 370 i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 370 LFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EEEEESCGGGCTTCBEEEEEE
T ss_pred EEEEEecCCCCCceEEEEEEe
Confidence 7776665 778888765
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.51 E-value=1.3e-12 Score=131.97 Aligned_cols=252 Identities=9% Similarity=-0.007 Sum_probs=151.7
Q ss_pred ccceeecCCCCeEEeeecC---CeEEEeeCCccccccccccccceeecCCCC-EEEEEEccCCCEEEEEeCCCcEEEEec
Q 010037 238 HGSATLKPGDHELTLGQRM---RRVRVHPVKKQSRELSSLYTGQEFLAHEGS-ILTMKFSLDGQYLASGGEDGTVRVWKV 313 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~d---g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~-I~~l~fspdg~~LaSgs~Dg~I~iWd~ 313 (519)
+..++|+|+|++|+..... ..|.+|+....... .+..+... +..+.|+|||++|+.++.++.|++|++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~--------~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV--------QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDL 109 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE--------ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEET
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE--------EeecCCCCccccceECCCCCEEEEEEcCCcEEEEEC
Confidence 5568999999998876443 46888887654321 11222222 233789999999999999999999999
Q ss_pred ccCeeeceeeccCCCCce-EEEeecCCCCeEEe-----eccCCceeeeeee----ccCCCeeEEEeCCccccccccceeE
Q 010037 314 IEHERLDGFDVQDTDPSC-LYFTINHLSQLIPI-----DVDKEKIDKTKSL----RKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
.+++.......+...... ..+........... ...... ....+ .......+.+++.... ....
T Consensus 110 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~l~~~d~~~g-----~~~~ 182 (396)
T 3c5m_A 110 ETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT--SWEKFAEFYHTNPTCRLIKVDIETG-----ELEV 182 (396)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC--SHHHHHHHHHTCCCEEEEEEETTTC-----CEEE
T ss_pred CCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC--cceeeeeeccCCCcceEEEEECCCC-----cEEe
Confidence 887754444322220000 00000000000000 000000 00000 1133445556654432 1233
Q ss_pred eeccCCCeeEEEEcC-CC-eEEEEeCC------CcEEEEECCCCeEEEEecC--CCcEEEEEEeeCCCCEEEEEeCC---
Q 010037 384 FQGHSSEVLDLSWSK-NG-FLLSSSAD------KTVRLWQVGIDRCLRVFSH--NNYVTSVAFNPVDDNYFISGSID--- 450 (519)
Q Consensus 384 ~~~h~~~V~~l~~sp-~~-~L~sgs~D------g~V~lWdl~~~~~~~~~~h--~~~V~~v~fsp~d~~~l~sgs~D--- 450 (519)
+..+...+..+.|+| ++ .|+..+.+ ..|.+||+.+++......+ ...+..++|+| ++++|+.++.+
T Consensus 183 ~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 183 IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQ 261 (396)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT-TSSCEEEEEEETTT
T ss_pred eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC-CCCEEEEEecCCCC
Confidence 345677899999999 67 66665543 4688999877654444333 23688899999 88877766543
Q ss_pred --CeEEEEEcCCCcEEeeccCCCceEEEEEee-CCCEEEEEe----------------cCCeEEEEECCCCeeeec
Q 010037 451 --GKVRIWEVRRCQVVDYTDIREIVSAVCYCP-DGKGGIVGT----------------MTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 451 --g~V~iwd~~~~~~~~~~~~~~~V~~v~~sp-dg~~l~sgs----------------~dg~v~iwdl~~~~l~~~ 507 (519)
+.|++||+.+++......... .. +.|+| ||++|++++ .++.|++||+.++++..+
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp CCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred ccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 459999999887654433322 33 89999 999888765 347899999988876544
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.51 E-value=7.4e-12 Score=124.30 Aligned_cols=238 Identities=11% Similarity=0.076 Sum_probs=160.1
Q ss_pred ecccceeecCCCCeEEeeecC------------------------CeEEEeeCCcccccccccccccee-ecCCCCEEEE
Q 010037 236 DRHGSATLKPGDHELTLGQRM------------------------RRVRVHPVKKQSRELSSLYTGQEF-LAHEGSILTM 290 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~d------------------------g~I~vw~~~~~~~~~~~~~~~~~l-~~H~~~I~~l 290 (519)
..+..++++|+|+++++...+ ++|.+|+....... ..+ .++-.....|
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~-------~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL-------QSSGKNLFYLPHGL 96 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE-------EEECTTTCSSEEEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE-------eccCCCccCCceEE
Confidence 445678999999999888777 47899987644321 111 1345678999
Q ss_pred EEccCCCEEEEEeCCCcEEEEecccCe-eeceeec---------cCCCCceEEEeecCCCCeEEeeccCCceeeeeeecc
Q 010037 291 KFSLDGQYLASGGEDGTVRVWKVIEHE-RLDGFDV---------QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRK 360 (519)
Q Consensus 291 ~fspdg~~LaSgs~Dg~I~iWd~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (519)
+++|+|+++++...++.|++|+..... .+..+.. ....+..+.+.+. ...++....
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~------------- 162 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDG------------- 162 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEEC-------------
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeC-------------
Confidence 999999988888889999999985442 2333311 1112223333321 122222221
Q ss_pred CCCeeEEEeCCccccccccceeEee----------ccCCCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEec--
Q 010037 361 SSDLTCVVLPPKVFRLLEKPLHEFQ----------GHSSEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-- 426 (519)
Q Consensus 361 s~~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-- 426 (519)
.....+..++.. +..+..+. ++......|+++|+ + ++++...++.|++|+..+++.+..+.
T Consensus 163 ~~~~~I~~~~~~-----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 163 YCNSRIVQFSPS-----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp SSCCEEEEECTT-----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred CCCCeEEEEcCC-----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 022334444321 12222222 22345889999998 6 66777788999999999899988884
Q ss_pred -CCCcEEEEEEeeCCCCEEEEE-------eCCCeEEEEEcCCCcEEeec----cCCCceEEEEEeeCCCEEEEEecCCeE
Q 010037 427 -HNNYVTSVAFNPVDDNYFISG-------SIDGKVRIWEVRRCQVVDYT----DIREIVSAVCYCPDGKGGIVGTMTGNC 494 (519)
Q Consensus 427 -h~~~V~~v~fsp~d~~~l~sg-------s~Dg~V~iwd~~~~~~~~~~----~~~~~V~~v~~spdg~~l~sgs~dg~v 494 (519)
+...+..++|+| +..+++. ..+..|++||+.+++++... .+...+..++++|+|.++++...++.|
T Consensus 238 ~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 238 SFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp TTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred ccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 567789999998 3333333 23458999999999988653 456678999999999888888889999
Q ss_pred EEEECCC
Q 010037 495 RFYDIKG 501 (519)
Q Consensus 495 ~iwdl~~ 501 (519)
++|++..
T Consensus 316 ~~~~~~~ 322 (329)
T 3fvz_A 316 WKFTLTE 322 (329)
T ss_dssp EEEEEEE
T ss_pred EEEeCCc
Confidence 9999864
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.48 E-value=1.2e-12 Score=129.80 Aligned_cols=193 Identities=10% Similarity=0.083 Sum_probs=132.4
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCC-CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEE
Q 010037 289 TMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDT-DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCV 367 (519)
Q Consensus 289 ~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 367 (519)
.+++++++.++++++.++.|++||+.+++....+..+.. .+..+.+.++.. .++.. ...+..+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~~~v~--------------~~~~~~i~ 68 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNR-TAYVL--------------NNHYGDIY 68 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSS-EEEEE--------------ETTTTEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCC-EEEEE--------------eCCCCcEE
Confidence 356788889999999999999999999988777765431 344555544432 12211 12334455
Q ss_pred EeCCccccccccceeEeecc------CCCeeEEEEcCCC-eEEEEeCC------------CcEEEEECCCC---eEEEEe
Q 010037 368 VLPPKVFRLLEKPLHEFQGH------SSEVLDLSWSKNG-FLLSSSAD------------KTVRLWQVGID---RCLRVF 425 (519)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~h------~~~V~~l~~sp~~-~L~sgs~D------------g~V~lWdl~~~---~~~~~~ 425 (519)
+|+.... +.+..+..+ ...+.+++|+|+| +|++++.+ +.|.+||+.++ +.+..+
T Consensus 69 ~~d~~t~----~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 69 GIDLDTC----KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp EEETTTT----EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred EEeCCCC----cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 5554432 222233322 2347899999999 88887755 89999999884 444556
Q ss_pred cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCC-----------------------------------
Q 010037 426 SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIR----------------------------------- 470 (519)
Q Consensus 426 ~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~----------------------------------- 470 (519)
.+...+.+++|+| +++ +++++ +.|++||+.+++.+......
T Consensus 145 ~~~~~~~~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T 1jmx_B 145 PMPRQVYLMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 220 (349)
T ss_dssp ECCSSCCCEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred cCCCcccceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence 6666799999999 888 55554 34999999988766322111
Q ss_pred ----------------------------------CceEEEEEee-CCCEEEEEecCCeEEEEECCCCeeee
Q 010037 471 ----------------------------------EIVSAVCYCP-DGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 471 ----------------------------------~~V~~v~~sp-dg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
..+..++|+| ||++|+++ ++.|.+||+.++++..
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE
Confidence 1345677889 99999888 8899999999987654
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.47 E-value=1.2e-12 Score=142.29 Aligned_cols=191 Identities=10% Similarity=0.044 Sum_probs=136.6
Q ss_pred cCCCCe-EEeeec-CCeEEEeeCC--c-cccccccccccceeec-----CCCCEEEEEEccCCCEEEEEeCC--------
Q 010037 244 KPGDHE-LTLGQR-MRRVRVHPVK--K-QSRELSSLYTGQEFLA-----HEGSILTMKFSLDGQYLASGGED-------- 305 (519)
Q Consensus 244 sp~g~~-lasgs~-dg~I~vw~~~--~-~~~~~~~~~~~~~l~~-----H~~~I~~l~fspdg~~LaSgs~D-------- 305 (519)
+|||+. |+.+.. +..|.+++.. . .. . +.+.. |...+..++|+|||++|++++.|
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~--~------~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAV--P------RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCC--C------EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCC--C------EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 499998 766543 5667777764 1 11 1 12223 66778999999999999998876
Q ss_pred --CcEEEEeccc------CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccc
Q 010037 306 --GTVRVWKVIE------HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLL 377 (519)
Q Consensus 306 --g~I~iWd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 377 (519)
..|++|++.+ ++.
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~----------------------------------------------------------- 179 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAV----------------------------------------------------------- 179 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGS-----------------------------------------------------------
T ss_pred ceeEEEEEECCCCccccCCce-----------------------------------------------------------
Confidence 4788888765 221
Q ss_pred ccceeEee-ccCCCeeEEEEcCCC-eEEEEeCC--------CcEEEEECC-CC---eEEEEec-CCCcEEEEEEeeCCCC
Q 010037 378 EKPLHEFQ-GHSSEVLDLSWSKNG-FLLSSSAD--------KTVRLWQVG-ID---RCLRVFS-HNNYVTSVAFNPVDDN 442 (519)
Q Consensus 378 ~~~~~~~~-~h~~~V~~l~~sp~~-~L~sgs~D--------g~V~lWdl~-~~---~~~~~~~-h~~~V~~v~fsp~d~~ 442 (519)
..+. .+...+..++|+|+| +|+.++.+ ..|++||+. ++ +...... +...+..+.|+| +++
T Consensus 180 ----~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~ 254 (662)
T 3azo_A 180 ----RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGS 254 (662)
T ss_dssp ----EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSC
T ss_pred ----eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCe
Confidence 1122 334567788999999 78777654 379999999 56 4444444 578899999999 888
Q ss_pred EEEEEeCCC--eEEEEEcCCCcEEeeccCCCc---------eEEEEEeeCCCEEEEEecCCeEEEE--ECCCCeeeec
Q 010037 443 YFISGSIDG--KVRIWEVRRCQVVDYTDIREI---------VSAVCYCPDGKGGIVGTMTGNCRFY--DIKGMQIFDL 507 (519)
Q Consensus 443 ~l~sgs~Dg--~V~iwd~~~~~~~~~~~~~~~---------V~~v~~spdg~~l~sgs~dg~v~iw--dl~~~~l~~~ 507 (519)
+++++..++ .|.+||+.+++...+..+... +..++|+|+++++++++. +.++|| |+.++++..+
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDA 331 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEEC
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEe
Confidence 888888888 677777767776654433222 467899999999999998 998888 7777766554
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.46 E-value=1.8e-11 Score=119.15 Aligned_cols=244 Identities=11% Similarity=0.053 Sum_probs=158.2
Q ss_pred ceeecCCCC-eEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCee
Q 010037 240 SATLKPGDH-ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (519)
Q Consensus 240 ~~~~sp~g~-~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~ 318 (519)
+++|+|+++ +++++..++.|.+|+.... . +.+..+...+.+++++++|+++++...++.|.+||..+++.
T Consensus 32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~--------~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L--------SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTSC-E--------EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred CCeEeCCCCEEEEEeCCCCEEEEEECCCC-e--------EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 479999998 7888889999999998754 1 23455677899999999999888777778999999977765
Q ss_pred eceeeccC----CCCceEEEeecCCCCeEEeeccCCcee---eeeeeccCCCeeEEEeCCccccccccceeEeeccCCCe
Q 010037 319 LDGFDVQD----TDPSCLYFTINHLSQLIPIDVDKEKID---KTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (519)
Q Consensus 319 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 391 (519)
........ ..+..+.+.+. ..++.......... ............+..++.. ..+..+..+....
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~--G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPD--GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD------GTLSAPIRDRVKP 174 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTT--SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT------SCEEEEECCCSSE
T ss_pred EEEeeccCCCCCCCCCCEEECCC--CCEEEECCccccccccccccccccCCCcEEEEECCC------CCEEEeecCCCCC
Confidence 33221111 11223333332 22222111000000 0000000112244444432 1123344566678
Q ss_pred eEEEEcCCC-eEEEEeCCCcEEEEECC-CCeE---EEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-
Q 010037 392 LDLSWSKNG-FLLSSSADKTVRLWQVG-IDRC---LRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV- 464 (519)
Q Consensus 392 ~~l~~sp~~-~L~sgs~Dg~V~lWdl~-~~~~---~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~- 464 (519)
..++|+|++ .|++.+.++.|.+|++. .++. ...+. +...+.++++++ +++++++. ++.|.+||.. ++.+
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEE
Confidence 899999999 66777888999999997 4544 33332 455677899999 88877666 8899999997 5554
Q ss_pred eeccCCCceEEEEE-eeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 465 DYTDIREIVSAVCY-CPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 465 ~~~~~~~~V~~v~~-spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.+..+.. +++++| .|+++.|++++.+ .+.-+++.+.+++.
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCCC
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccccc
Confidence 4554555 899999 5899989988875 56667787777654
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.46 E-value=1.6e-11 Score=123.65 Aligned_cols=246 Identities=11% Similarity=0.097 Sum_probs=141.3
Q ss_pred eEEeeecC--CeEEEeeCCcccccccccccccee-ecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecc-cCeeeceeec
Q 010037 249 ELTLGQRM--RRVRVHPVKKQSRELSSLYTGQEF-LAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI-EHERLDGFDV 324 (519)
Q Consensus 249 ~lasgs~d--g~I~vw~~~~~~~~~~~~~~~~~l-~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~-~~~~~~~~~~ 324 (519)
.+++|+.. +.|.+|++......+... ... .++...+..++|+|+|++|++++.+ .|.+|++. +++.......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~---~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~ 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLI---KRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEE---EEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEe---eEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe
Confidence 34555543 568888764322222111 111 1234467889999999999999888 99999997 6765432221
Q ss_pred cC-CCCceEEEeecCCCCeEEeeccCCceeeeeeeccC----CCeeEEEeCCcc-ccccccceeEee-ccCCCeeEEEEc
Q 010037 325 QD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKS----SDLTCVVLPPKV-FRLLEKPLHEFQ-GHSSEVLDLSWS 397 (519)
Q Consensus 325 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~~~~~~~~~-~~~~~~~~~~~~-~h~~~V~~l~~s 397 (519)
.. ..+..+.+.++... ++.+........ . ... .++.+.+|+... ..+. ..+..+. .+...+.+++|+
T Consensus 80 ~~~g~~~~~~~spdg~~-l~~~~~~~~~~~---~-~~~~~~~~~g~v~v~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~s 153 (365)
T 1jof_A 80 PIGGHPRANDADTNTRA-IFLLAAKQPPYA---V-YANPFYKFAGYGNVFSVSETGKLE-KNVQNYEYQENTGIHGMVFD 153 (365)
T ss_dssp ECCSSGGGGCTTSCCEE-EEEEECSSTTCC---E-EEEEESSSCCEEEEEEECTTCCEE-EEEEEEECCTTCCEEEEEEC
T ss_pred ecCCCCccEEECCCCCE-EEEEEecCCcce---e-ccceeecCCceEEEEccCCCCcCc-ceEeeEEeCCCCcceEEEEC
Confidence 10 11222222222211 011111000000 0 000 233344443321 1110 1111111 255679999999
Q ss_pred CCC-eEEEEe-CCCcEEEEECC-CCeEE--EEec---CCCcEEEEEEeeCCCCEEEEEeC-CCeEEEEEcC--CCcEE--
Q 010037 398 KNG-FLLSSS-ADKTVRLWQVG-IDRCL--RVFS---HNNYVTSVAFNPVDDNYFISGSI-DGKVRIWEVR--RCQVV-- 464 (519)
Q Consensus 398 p~~-~L~sgs-~Dg~V~lWdl~-~~~~~--~~~~---h~~~V~~v~fsp~d~~~l~sgs~-Dg~V~iwd~~--~~~~~-- 464 (519)
|+| +|+++. .++.|++|++. +++.. ..+. |...+..++|+| +++++++++. ++.|.+|++. +++..
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 232 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYT 232 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEc
Confidence 999 777665 46899999998 67653 2332 366799999999 8988887775 7899999875 45432
Q ss_pred --ee--c-----cCCC------ceEEEE-EeeCCCEEEEEecCC------eEEEEECC-CCeee
Q 010037 465 --DY--T-----DIRE------IVSAVC-YCPDGKGGIVGTMTG------NCRFYDIK-GMQIF 505 (519)
Q Consensus 465 --~~--~-----~~~~------~V~~v~-~spdg~~l~sgs~dg------~v~iwdl~-~~~l~ 505 (519)
.. . ++.. .+..++ |+|||++|+++..+. .|.+|++. ++++.
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred cceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 11 1 1121 588999 999999988776432 89999996 56654
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.43 E-value=3.1e-11 Score=119.94 Aligned_cols=233 Identities=8% Similarity=0.088 Sum_probs=146.5
Q ss_pred cccceeecCCCCeEEeeecC---C--eEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC------
Q 010037 237 RHGSATLKPGDHELTLGQRM---R--RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED------ 305 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~d---g--~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D------ 305 (519)
.+...+|+|+|++||..+.+ + .|.+|++..+... .+..+.. +..+.|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~--------~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~ 130 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK--------KILEAKN-IRSLEWNEDSRKLLIVGFKRREDED 130 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE--------EEEEESE-EEEEEECTTSSEEEEEEECCCC---
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE--------EEEcCCC-ccceeECCCCCEEEEEEccCCCcCC
Confidence 44567999999999887654 3 3677776543211 1222334 9999999999999888642
Q ss_pred ---------------------CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCe
Q 010037 306 ---------------------GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (519)
Q Consensus 306 ---------------------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 364 (519)
..|.+|++.+++.+..+.. . ....+.|.++. .++......... ......
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~------~~~~~~ 200 (347)
T 2gop_A 131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIP------QYFKFW 200 (347)
T ss_dssp ------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSC------CSSCCE
T ss_pred cEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccc------cccccc
Confidence 5789999988876444444 2 55566666554 222222111000 000012
Q ss_pred eEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCC--------CcEEEEECCCCeEEEEec-CCCcEEE-
Q 010037 365 TCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD--------KTVRLWQVGIDRCLRVFS-HNNYVTS- 433 (519)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~D--------g~V~lWdl~~~~~~~~~~-h~~~V~~- 433 (519)
.+..++ . .....+..+ ..+..+ +|+| +|+.++.+ ..|.+|| +++...... +...+..
T Consensus 201 ~l~~~d--~-----~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~ 268 (347)
T 2gop_A 201 DIYIWE--D-----GKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQA 268 (347)
T ss_dssp EEEEEE--T-----TEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEE
T ss_pred cEEEeC--C-----CceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCc
Confidence 233332 0 112223333 444444 8999 77766644 3688888 565544444 5677886
Q ss_pred EEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeE-EEEECCCCeeeec
Q 010037 434 VAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNC-RFYDIKGMQIFDL 507 (519)
Q Consensus 434 v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v-~iwdl~~~~l~~~ 507 (519)
+.|+ ++ ++++++.++.++|| +.+++......+...|.+++|+| .++++++.++.. .||.+. ++..++
T Consensus 269 ~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~~~l 336 (347)
T 2gop_A 269 KIKD--GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEEKQL 336 (347)
T ss_dssp EEET--TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSEEEC
T ss_pred cEEc--Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcEEEe
Confidence 8997 56 88899999999999 88777666666678899999999 677777777664 777665 544443
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.43 E-value=1.3e-12 Score=142.17 Aligned_cols=207 Identities=11% Similarity=0.010 Sum_probs=141.3
Q ss_pred eecccceeecCCCCeEEee--ecCCeEEEeeCCccccccccccccceeecCCCCEE---------EEEEc--cCCCE-EE
Q 010037 235 IDRHGSATLKPGDHELTLG--QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSIL---------TMKFS--LDGQY-LA 300 (519)
Q Consensus 235 ~~~~~~~~~sp~g~~lasg--s~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~---------~l~fs--pdg~~-La 300 (519)
...+..+++++++-+++.. ..+++..||....... .+.+..|...+. ...|+ |||++ |+
T Consensus 23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA-------EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC-------EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC-------cceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 3455567888876666666 5588999998632211 123444555555 56666 99998 77
Q ss_pred EEeC-CCcEEEEecc--c-CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccc
Q 010037 301 SGGE-DGTVRVWKVI--E-HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL 376 (519)
Q Consensus 301 Sgs~-Dg~I~iWd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 376 (519)
.++. +..|.+|++. . +.. ..+..
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~-~~l~~---------------------------------------------------- 122 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVP-RPLTP---------------------------------------------------- 122 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCC-EECSC----------------------------------------------------
T ss_pred EEECCCCeEEEEcCCCCCCCCC-EeccC----------------------------------------------------
Confidence 6654 4455555553 1 221 00000
Q ss_pred cccceeEeeccCCCeeEEEEcCCC-eEEEEeCC----------CcEEEEECCC------CeEEEEe-cCCCcEEEEEEee
Q 010037 377 LEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD----------KTVRLWQVGI------DRCLRVF-SHNNYVTSVAFNP 438 (519)
Q Consensus 377 ~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~D----------g~V~lWdl~~------~~~~~~~-~h~~~V~~v~fsp 438 (519)
.....|...+..++|+|+| .|++++.+ ..|++||+.+ ++..... .+...+..++|+|
T Consensus 123 -----~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Sp 197 (662)
T 3azo_A 123 -----VSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSP 197 (662)
T ss_dssp -----CCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECT
T ss_pred -----CccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECC
Confidence 0000145668899999999 88888776 5899999998 6665555 5667889999999
Q ss_pred CCCCEEEEEeCC--------CeEEEEEcC-CC---cEEeecc-CCCceEEEEEeeCCCEEEEEecCC--eEEEEECCCCe
Q 010037 439 VDDNYFISGSID--------GKVRIWEVR-RC---QVVDYTD-IREIVSAVCYCPDGKGGIVGTMTG--NCRFYDIKGMQ 503 (519)
Q Consensus 439 ~d~~~l~sgs~D--------g~V~iwd~~-~~---~~~~~~~-~~~~V~~v~~spdg~~l~sgs~dg--~v~iwdl~~~~ 503 (519)
|+++|+.++.+ ..|++||+. ++ +...+.. +...+..++|+|||++++++..+| .|.+||+.+++
T Consensus 198 -DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 198 -DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp -TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred -CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 99999887755 379999999 56 4444443 467899999999999888888888 67778877776
Q ss_pred eeec
Q 010037 504 IFDL 507 (519)
Q Consensus 504 l~~~ 507 (519)
+.++
T Consensus 277 ~~~l 280 (662)
T 3azo_A 277 ATQL 280 (662)
T ss_dssp EEES
T ss_pred eeec
Confidence 6554
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.43 E-value=1.9e-11 Score=123.10 Aligned_cols=232 Identities=10% Similarity=0.082 Sum_probs=141.7
Q ss_pred ceeecCCCCeEEeee----------cCCeEEEeeCCccccccccccccceeec------CCCCEEEEEEccCCCEEEEEe
Q 010037 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTGQEFLA------HEGSILTMKFSLDGQYLASGG 303 (519)
Q Consensus 240 ~~~~sp~g~~lasgs----------~dg~I~vw~~~~~~~~~~~~~~~~~l~~------H~~~I~~l~fspdg~~LaSgs 303 (519)
.++|+|+|++++++. .++.|.+||...... .+++.. +......++|+|||++|+++.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-------~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-------EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-------EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-------EEEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence 579999999999876 367899999864332 112221 224466799999999999886
Q ss_pred C--CCcEEEEecccCeeece-eeccCC------C-CceEEEeecCCCCeEEeeccC-Ccee-ee----------------
Q 010037 304 E--DGTVRVWKVIEHERLDG-FDVQDT------D-PSCLYFTINHLSQLIPIDVDK-EKID-KT---------------- 355 (519)
Q Consensus 304 ~--Dg~I~iWd~~~~~~~~~-~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~-~~~~-~~---------------- 355 (519)
. ++.|.+||+.+++.+.. +..... + .....+.......+..+.... .+.. ..
T Consensus 127 ~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (361)
T 2oiz_A 127 ASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIA 206 (361)
T ss_dssp ESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSC
T ss_pred CCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEE
Confidence 4 58999999999987766 443211 0 001111111122222222211 1111 00
Q ss_pred ------eeeccCCCeeEEEeCCccccccccceeEeec------c----CCCeeEEEEcCCC-eEEEEeC-----------
Q 010037 356 ------KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG------H----SSEVLDLSWSKNG-FLLSSSA----------- 407 (519)
Q Consensus 356 ------~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~------h----~~~V~~l~~sp~~-~L~sgs~----------- 407 (519)
..+..+.++.+.+++...-.. ..+..+.. + ......++++|++ +++.+..
T Consensus 207 ~~~~g~~~~~~~~~~~v~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~ 284 (361)
T 2oiz_A 207 PALDKDKAHFVSYYGNVYSADFSGDEV--KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFP 284 (361)
T ss_dssp CEECSSEEEEEBTTSEEEEEECSSSSC--EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCC
T ss_pred ecccCCEEEEEeCCCeEEEEEecCCCc--eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCC
Confidence 000001112233332211000 00001100 0 0112237899997 5555432
Q ss_pred CCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC--cEEee-ccCCCceEEEEEeeCCC
Q 010037 408 DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC--QVVDY-TDIREIVSAVCYCPDGK 483 (519)
Q Consensus 408 Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~--~~~~~-~~~~~~V~~v~~spdg~ 483 (519)
..+|.+||+.+++.+..+.-.. +.+|+|+| ++++|++++. +.|.+||..++ +++.. .........++++|+|.
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~-p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD-ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT-CCEEEEET-TTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CceEEEEECCCCcEEEEEecCC-eeEEEECC-CCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 3589999999999999988444 99999999 8999998886 99999999999 88866 57788889999999986
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.40 E-value=6e-10 Score=110.04 Aligned_cols=231 Identities=10% Similarity=0.043 Sum_probs=144.1
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC----CcEEEEec
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED----GTVRVWKV 313 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D----g~I~iWd~ 313 (519)
..+++|+|+|.+++++..++.|.+|+........ ....+...+.+++|+|+|+++++...+ +.|.+||.
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~-------~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-------PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-------EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE-------EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 3457899999988888889999999986443211 122456789999999999988877666 68999998
Q ss_pred ccCeeeceeecc--CCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCe
Q 010037 314 IEHERLDGFDVQ--DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (519)
Q Consensus 314 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 391 (519)
.++.....+... ...+..+.+.+. ..++....... .......+..++.... .+..+..+...+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~--------~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~ 184 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSK--GGFYFTDFRGY--------STNPLGGVYYVSPDFR-----TVTPIIQNISVA 184 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTT--SCEEEEECCCB--------TTBCCEEEEEECTTSC-----CEEEEEEEESSE
T ss_pred CCCEEEEEEccCccCCcccceEECCC--CCEEEEecccc--------ccCCCceEEEEeCCCC-----EEEEeecCCCcc
Confidence 877643222211 112222333322 22222211100 0011234444443221 122222334457
Q ss_pred eEEEEcCCC-eEE-EEeCCCcEEEEECCC-CeEEEE-----e---cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC
Q 010037 392 LDLSWSKNG-FLL-SSSADKTVRLWQVGI-DRCLRV-----F---SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (519)
Q Consensus 392 ~~l~~sp~~-~L~-sgs~Dg~V~lWdl~~-~~~~~~-----~---~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~ 460 (519)
..++|+|++ .|+ +.+.++.|.+||+.+ +..+.. + .....+..+++++ +++++++...++.|.+||..
T Consensus 185 ~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~- 262 (333)
T 2dg1_A 185 NGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFNKR- 262 (333)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEETTTEEEEECTT-
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECC-CCCEEEEEcCCCEEEEECCC-
Confidence 899999998 554 445678999999964 322211 1 1124788999999 89988888888999999985
Q ss_pred CcEE-eeccCCC------ceEEEEEeeCCCEEEEEecCC
Q 010037 461 CQVV-DYTDIRE------IVSAVCYCPDGKGGIVGTMTG 492 (519)
Q Consensus 461 ~~~~-~~~~~~~------~V~~v~~spdg~~l~sgs~dg 492 (519)
++.+ .+..... .+.+++|+|||+.|++++.+|
T Consensus 263 g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 263 GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 4444 3332222 688999999988887776664
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=1.7e-11 Score=123.72 Aligned_cols=178 Identities=9% Similarity=0.017 Sum_probs=131.2
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccc----cccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEe
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS----SLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWK 312 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~----~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd 312 (519)
.++.+++++...++++|+.++ ++||+......... .+.. .....+.+ |+.|+| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~-~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTF-KWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCC-SEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccc-eEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 456689999999999999875 56698764331110 0111 12345677 999999 89999999 889999999
Q ss_pred cccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCee
Q 010037 313 VIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVL 392 (519)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 392 (519)
+.+..... ....|...+.
T Consensus 113 v~sl~~~~--------------------------------------------------------------~~~~~~~~v~ 130 (388)
T 1xip_A 113 LEELSEFR--------------------------------------------------------------TVTSFEKPVF 130 (388)
T ss_dssp SSSTTCEE--------------------------------------------------------------EEEECSSCEE
T ss_pred chhhhccC--------------------------------------------------------------ccceeeccee
Confidence 87654211 1122344456
Q ss_pred EEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcE--E-ee---
Q 010037 393 DLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV--V-DY--- 466 (519)
Q Consensus 393 ~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~--~-~~--- 466 (519)
++.+.+. .+++++.||.|.+||+..+.... +...|+|++|+| +| ++.|..||+|++|+....++ . .+
T Consensus 131 ~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~P 203 (388)
T 1xip_A 131 QLKNVNN-TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLP 203 (388)
T ss_dssp EEEECSS-EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred eEEecCC-CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCC
Confidence 6666554 38889999999999999887654 456899999999 77 78899999999999988774 2 22
Q ss_pred ---c---cCCCceEEEEEeeCCCEEEEEe
Q 010037 467 ---T---DIREIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 467 ---~---~~~~~V~~v~~spdg~~l~sgs 489 (519)
. ++...|.+|+|.+++.++++-.
T Consensus 204 p~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 204 SELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp HHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 2 3678899999999999888733
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.36 E-value=4.1e-11 Score=118.47 Aligned_cols=193 Identities=10% Similarity=0.057 Sum_probs=140.4
Q ss_pred ecccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q 010037 236 DRHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~ 315 (519)
..+.+++|+|++..++....++.+++|.-. ....+..+...+.+++|+++|++++++..++.|.+||..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE----------PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE----------EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred cccceeeecCCccceeEEeecccCcccccc----------eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 345678899999888887888888888321 1123456667789999999999888888899999999876
Q ss_pred CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEE
Q 010037 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (519)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 395 (519)
++.... ...+...+.+++
T Consensus 76 ~~~~~~--------------------------------------------------------------~~~~~~~~~~i~ 93 (333)
T 2dg1_A 76 KEIKRP--------------------------------------------------------------FVSHKANPAAIK 93 (333)
T ss_dssp CCEEEE--------------------------------------------------------------EECSSSSEEEEE
T ss_pred CcEEEE--------------------------------------------------------------eeCCCCCcceEE
Confidence 642110 112345689999
Q ss_pred EcCCC-eEEEEeCC----CcEEEEECCCCeEEEEec---CCCcEEEEEEeeCCCCEEEEEeC------CCeEEEEEcCCC
Q 010037 396 WSKNG-FLLSSSAD----KTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSI------DGKVRIWEVRRC 461 (519)
Q Consensus 396 ~sp~~-~L~sgs~D----g~V~lWdl~~~~~~~~~~---h~~~V~~v~fsp~d~~~l~sgs~------Dg~V~iwd~~~~ 461 (519)
++|++ ++++...+ +.|.+||..++.....+. +...+++++++| +++++++... .+.|..||..++
T Consensus 94 ~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 94 IHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFR 172 (333)
T ss_dssp ECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSC
T ss_pred ECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCC
Confidence 99999 55555555 689999998877654442 456799999999 8888877654 356777777666
Q ss_pred cEEeeccCCCceEEEEEeeCCCEEEEE-ecCCeEEEEECCC
Q 010037 462 QVVDYTDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIKG 501 (519)
Q Consensus 462 ~~~~~~~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~~ 501 (519)
+...+......+..++|+|+|+.|+++ +.++.|.+||+.+
T Consensus 173 ~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 173 TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 655444444567899999999866554 5678999999963
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.36 E-value=4e-11 Score=121.00 Aligned_cols=236 Identities=9% Similarity=0.009 Sum_probs=142.7
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEE--EccCCCEEEEE---------------
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMK--FSLDGQYLASG--------------- 302 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~--fspdg~~LaSg--------------- 302 (519)
..+|+|+|+.|+.+..++.|++|++....... .+..+...+.... ++|++++|+..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-------~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENV-------VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEE-------EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCccee-------eeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 46899999999999999999999998654321 2334444454444 48999988743
Q ss_pred -------eCCCcEEEEecccCeeeceeeccCCCCceEEEee-cCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccc
Q 010037 303 -------GEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTI-NHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (519)
Q Consensus 303 -------s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 374 (519)
..+..|.+||+.+++..... ..........+++ +....++... ... ......+.+++..
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~-~~~---------~~~~~~l~~~d~~-- 224 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHE-GPH---------DLVDARMWLINED-- 224 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEEC-SCT---------TTSSCSEEEEETT--
T ss_pred hhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEe-cCC---------CCCcceEEEEeCC--
Confidence 24467999999888654332 2233334455555 3322212111 100 0012233333322
Q ss_pred cccccceeEeeccC--CCeeEEEEcCCC-eEEEEeC-C-C---cEEEEECCCCeEEEEecCCCc------EEEEEEeeCC
Q 010037 375 RLLEKPLHEFQGHS--SEVLDLSWSKNG-FLLSSSA-D-K---TVRLWQVGIDRCLRVFSHNNY------VTSVAFNPVD 440 (519)
Q Consensus 375 ~~~~~~~~~~~~h~--~~V~~l~~sp~~-~L~sgs~-D-g---~V~lWdl~~~~~~~~~~h~~~------V~~v~fsp~d 440 (519)
......+..+. ..+..++|+|+| .|+..+. + + .|.+||+.+++.......... ...+.|+| +
T Consensus 225 ---~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-d 300 (388)
T 3pe7_A 225 ---GTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVG-D 300 (388)
T ss_dssp ---SCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEE-E
T ss_pred ---CCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEcc-C
Confidence 12223333343 357788999999 5654432 2 2 399999999875443332221 11237999 7
Q ss_pred CCEEEEE---------eCCCeEEEEEcCCCcEEeeccCCC-----------ceEEEEEeeCCCEEEEEe-cCCeEEEEEC
Q 010037 441 DNYFISG---------SIDGKVRIWEVRRCQVVDYTDIRE-----------IVSAVCYCPDGKGGIVGT-MTGNCRFYDI 499 (519)
Q Consensus 441 ~~~l~sg---------s~Dg~V~iwd~~~~~~~~~~~~~~-----------~V~~v~~spdg~~l~sgs-~dg~v~iwdl 499 (519)
++.|+.. ..+..|++||+.+++...+..+.. .+..++|+|||+.|+..+ .+|...||.+
T Consensus 301 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 301 GSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp ECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 8777653 456789999999988776666655 578899999999888766 4666666644
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.36 E-value=1e-10 Score=111.73 Aligned_cols=236 Identities=7% Similarity=-0.063 Sum_probs=150.6
Q ss_pred ccceeecCCCCeEE-eeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 238 HGSATLKPGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 238 ~~~~~~sp~g~~la-sgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
...++++|+|.+++ +...++.|.+|+......... ...+...+.+|+++++|+++++.. ++.|.+|+....
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-------~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-------PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-------CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred ccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-------eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence 34578999999777 557789999998654332111 012335678899999999666665 889999998665
Q ss_pred eeeceeeccC-CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEE
Q 010037 317 ERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (519)
Q Consensus 317 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 395 (519)
... .+.... ..+..+.+.+. ..++..... ...+..++...... ......+...+.+|+
T Consensus 98 ~~~-~~~~~~~~~p~~i~~~~~--g~l~v~~~~--------------~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~ 156 (270)
T 1rwi_B 98 NQT-VLPFDGLNYPEGLAVDTQ--GAVYVADRG--------------NNRVVKLAAGSKTQ----TVLPFTGLNDPDGVA 156 (270)
T ss_dssp CCE-ECCCCSCSSEEEEEECTT--CCEEEEEGG--------------GTEEEEECTTCCSC----EECCCCSCCSCCCEE
T ss_pred eEe-eeecCCcCCCcceEECCC--CCEEEEECC--------------CCEEEEEECCCcee----EeeccccCCCceeEE
Confidence 432 121111 22233333322 223322221 22333333222110 111112334678999
Q ss_pred EcCCC-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeec-cCCCc
Q 010037 396 WSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT-DIREI 472 (519)
Q Consensus 396 ~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~-~~~~~ 472 (519)
+++++ ++++...++.|.+||........... +...+.+|+++| ++.++++...++.|.+||.......... .+...
T Consensus 157 ~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 235 (270)
T 1rwi_B 157 VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNT 235 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSC
T ss_pred EeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCC
Confidence 99988 56666667899999998776544332 336789999999 7888888778899999999776544332 23356
Q ss_pred eEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
+.+++++|+|+++++...++.|++|++...+
T Consensus 236 p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 236 PLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 8999999999988888889999999987544
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.36 E-value=1.1e-11 Score=137.05 Aligned_cols=202 Identities=10% Similarity=0.087 Sum_probs=136.1
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCc---e--EEEeecCCCCeEEeeccCCceeeeeeecc
Q 010037 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPS---C--LYFTINHLSQLIPIDVDKEKIDKTKSLRK 360 (519)
Q Consensus 286 ~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (519)
....+.|+|||++|+++ |+.|++||+.++++...+..+..... . ..++++....++.... . .....
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~--~-----~~~r~ 88 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNY--V-----KQWRH 88 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEE--E-----ECSSS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECC--e-----eeEEE
Confidence 35578999999999886 99999999999987666655443211 1 3445544332222111 0 01112
Q ss_pred CCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcE------
Q 010037 361 SSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYV------ 431 (519)
Q Consensus 361 s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V------ 431 (519)
+..+.+.+|+..... ...+..|...+...+|||+| .|+.+ .++.|++|++.++...+... +...+
T Consensus 89 ~~~~~~~~~d~~~~~-----~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~ 162 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQ-----LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITD 162 (740)
T ss_dssp CEEEEEEEEETTTTE-----ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred ccceEEEEEECCCCc-----EEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCccc
Confidence 223445566655432 33456677889999999999 77776 46899999999887655332 22222
Q ss_pred -----------EEEEEeeCCCCEEEEEeCCC------------------------------------eEEEEEcCC---C
Q 010037 432 -----------TSVAFNPVDDNYFISGSIDG------------------------------------KVRIWEVRR---C 461 (519)
Q Consensus 432 -----------~~v~fsp~d~~~l~sgs~Dg------------------------------------~V~iwd~~~---~ 461 (519)
..+.|+| |+++|+.++.|. +|++||+.+ +
T Consensus 163 ~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~ 241 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSV 241 (740)
T ss_dssp HHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSS
T ss_pred ccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCC
Confidence 3489999 999999876332 588899998 7
Q ss_pred ---cEEeecc------CCCceEEEEEeeCCCEEEEEec----CCeEEEEECCCCe
Q 010037 462 ---QVVDYTD------IREIVSAVCYCPDGKGGIVGTM----TGNCRFYDIKGMQ 503 (519)
Q Consensus 462 ---~~~~~~~------~~~~V~~v~~spdg~~l~sgs~----dg~v~iwdl~~~~ 503 (519)
+...+.. +...+..++|+|||+.++.... +..|++||+.+++
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 242 TNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp SCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 4544432 6778999999999997766543 2369999998876
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.33 E-value=2.1e-10 Score=126.10 Aligned_cols=245 Identities=7% Similarity=-0.053 Sum_probs=151.9
Q ss_pred ccceeecCCCCeEEeeecCC-----eEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCc-----
Q 010037 238 HGSATLKPGDHELTLGQRMR-----RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT----- 307 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg-----~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~----- 307 (519)
+...+|+|||++||.+..++ .|++|++..+..... .+.. ..+..++|+|||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~------~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD------VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE------EEEE--ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc------cccC--cccceEEEEeCCCEEEEEEECCcccccc
Confidence 34579999999999766543 899999986543211 1111 22667999999999999988776
Q ss_pred -----------EEEEecccCeeecee--eccCCC--CceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCc
Q 010037 308 -----------VRVWKVIEHERLDGF--DVQDTD--PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPK 372 (519)
Q Consensus 308 -----------I~iWd~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 372 (519)
|++|++.+++....+ ...... .....++++....++..... ......+.+++..
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-----------~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG-----------CDPVNRLWYCDLQ 267 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS-----------SSSCCEEEEEEGG
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc-----------CCCccEEEEEECc
Confidence 999999877632122 211111 22334444432222211100 0013344444432
Q ss_pred ccc--c-cccceeEeeccCCCeeEEEEcCCC-eEEEEeCC----CcEEEEECCCCe---EEEEecCCC--cEEEEEEeeC
Q 010037 373 VFR--L-LEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD----KTVRLWQVGIDR---CLRVFSHNN--YVTSVAFNPV 439 (519)
Q Consensus 373 ~~~--~-~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~D----g~V~lWdl~~~~---~~~~~~h~~--~V~~v~fsp~ 439 (519)
... . .......+..+...+.. .|+|+| .|+..+.. ..|.+||+.++. ....+.|.. .+..++|++
T Consensus 268 ~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~- 345 (710)
T 2xdw_A 268 QESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR- 345 (710)
T ss_dssp GSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-
T ss_pred ccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-
Confidence 200 0 00134555666666655 478887 66555543 369999998864 234445544 688899997
Q ss_pred CCCEEEEEeCCCe--EEEEEcCCCcEE-eeccCCCceEEEEEeeCCCEEEEEec----CCeEEEEECCCCe
Q 010037 440 DDNYFISGSIDGK--VRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKGGIVGTM----TGNCRFYDIKGMQ 503 (519)
Q Consensus 440 d~~~l~sgs~Dg~--V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~l~sgs~----dg~v~iwdl~~~~ 503 (519)
++.++++...|+. |.+|++.+++.+ .+..+...+..++++|+++.|+.... .+.|++||+.+++
T Consensus 346 ~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 346 SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 7788888888884 666787667654 44555677889999999987664432 4789999998876
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.33 E-value=2.8e-10 Score=114.58 Aligned_cols=237 Identities=12% Similarity=0.006 Sum_probs=137.3
Q ss_pred cCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEecccCeeeceeec
Q 010037 255 RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------EDGTVRVWKVIEHERLDGFDV 324 (519)
Q Consensus 255 ~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs----------~Dg~I~iWd~~~~~~~~~~~~ 324 (519)
.|+.|.+||....+.. ..+..+..+ .++|+|||++|+++. .++.|.+||+.+.+.+..+..
T Consensus 29 ~d~~v~v~D~~t~~~~-------~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFL-------GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCCEE-------EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEE
T ss_pred ccCeEEEEECCCCeEE-------EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEc
Confidence 4789999997654321 234555555 899999999999886 367899999999888877765
Q ss_pred cC------CCCceEEEeecCCC----------CeEEeeccCCceeee-eee-----------------ccCCCeeEEEeC
Q 010037 325 QD------TDPSCLYFTINHLS----------QLIPIDVDKEKIDKT-KSL-----------------RKSSDLTCVVLP 370 (519)
Q Consensus 325 ~~------~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~-----------------~~s~~~~~~~~~ 370 (519)
.. ..+..+.+.++... .+..++....+.... ... ..+.++.+..+.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTIN 179 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEE
T ss_pred CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEE
Confidence 32 23444555444321 222222222211111 000 000111111111
Q ss_pred Cccccccccce------eEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCe--EEEEec-------CC----Cc
Q 010037 371 PKVFRLLEKPL------HEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDR--CLRVFS-------HN----NY 430 (519)
Q Consensus 371 ~~~~~~~~~~~------~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~--~~~~~~-------h~----~~ 430 (519)
... .++.. ..+..+..+ ..+.+++++ .++..+.++.|.++|+.... .+..+. +. ..
T Consensus 180 ~~~---~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g 255 (361)
T 2oiz_A 180 LGE---DGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGG 255 (361)
T ss_dssp ECT---TSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECC
T ss_pred ECC---CCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCC
Confidence 000 00000 001111111 122334555 56666778889999987543 222221 00 11
Q ss_pred EEEEEEeeCCCCEEEEEeC-----------CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 431 VTSVAFNPVDDNYFISGSI-----------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 431 V~~v~fsp~d~~~l~sgs~-----------Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
..-++|+| +++.++++.. .+.|.+||+.+++++....... +.+++|+|||++|++++. +.|.+||+
T Consensus 256 ~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 256 YNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp SSCEEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred eeEEEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 11278999 7666665532 3489999999999886444444 999999999999998887 99999999
Q ss_pred CCC--eeeec
Q 010037 500 KGM--QIFDL 507 (519)
Q Consensus 500 ~~~--~l~~~ 507 (519)
.++ +++..
T Consensus 333 ~t~~l~~~~~ 342 (361)
T 2oiz_A 333 SQPEPKLLRT 342 (361)
T ss_dssp SSSSCEEEEE
T ss_pred CCCcceeeEE
Confidence 999 76543
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.32 E-value=3.9e-10 Score=109.03 Aligned_cols=212 Identities=11% Similarity=0.035 Sum_probs=143.2
Q ss_pred CCCeEEeeecCCeEEEeeCCccccccccccccceeecCC-CCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeec
Q 010037 246 GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHE-GSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDV 324 (519)
Q Consensus 246 ~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~-~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~ 324 (519)
.++.|++++.++.|.+||...++.. . .+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~-w------~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV-W------EYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE-E------EEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE-E------EeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC
Confidence 4578999999999999998655532 1 234444 4688999999999888 34778999999 8888877765
Q ss_pred cCC-CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee------ccCCCeeEEEEc
Q 010037 325 QDT-DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ------GHSSEVLDLSWS 397 (519)
Q Consensus 325 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~V~~l~~s 397 (519)
+.. ......+.+ ...++..... ....+..++.. ++.+..+. ++......++..
T Consensus 74 ~~~~~~~~~~~~~--dG~~lv~~~~-------------~~~~v~~vd~~-----Gk~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 74 PAGCEMQTARILP--DGNALVAWCG-------------HPSTILEVNMK-----GEVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp CTTCEEEEEEECT--TSCEEEEEES-------------TTEEEEEECTT-----SCEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred CCCccccccEECC--CCCEEEEecC-------------CCCEEEEEeCC-----CCEEEEEeccCCCCcccccccCceEC
Confidence 421 111222222 1222221111 02222222221 11122211 222345567788
Q ss_pred CCC-eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-eccC------
Q 010037 398 KNG-FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDI------ 469 (519)
Q Consensus 398 p~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~~~------ 469 (519)
++| +|++...++.|..||.. ++.+..+.....+.++.+.| ++++++++..++.|..+|..+++++. +...
T Consensus 134 ~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 134 KKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred CCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 888 88899999999999998 99998888666677888888 89999999988999999999998873 3221
Q ss_pred CCceEEEEEeeCCCEEEEEe
Q 010037 470 REIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 470 ~~~V~~v~~spdg~~l~sgs 489 (519)
-..+..++..++|+.+++..
T Consensus 212 l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CSEEEEEEECTTSCEEEEEE
T ss_pred ccccccceEcCCCCEEEEec
Confidence 12378899999999887764
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.30 E-value=3.7e-11 Score=121.30 Aligned_cols=239 Identities=6% Similarity=-0.033 Sum_probs=139.7
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEE-------------------EEEccCCCEEEE
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILT-------------------MKFSLDGQYLAS 301 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~-------------------l~fspdg~~LaS 301 (519)
..|+|+|++|+.++.++.|++|++....... .+..+...... +.|+|++++++.
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~-------~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQV-------IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEE-------EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEE-------EEecccccCCCCCEEEeccCCccccccccccccCCCCcceee
Confidence 6799999999999999999999987544211 11222221111 356777776665
Q ss_pred E-----eCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccc
Q 010037 302 G-----GEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRL 376 (519)
Q Consensus 302 g-----s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 376 (519)
+ ..+..|.+||+.+++..... ........+.|.+.....++....... ......+.+++...
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~---------~~~~~~l~~~d~~~--- 225 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPH---------DLVDARMWLVNEDG--- 225 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCS---------SSCSCCCEEEETTS---
T ss_pred eeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCC---------CCCCceEEEEECCC---
Confidence 4 35678999999887654333 222233344444411111111110000 00002233333211
Q ss_pred cccceeEeecc--CCCeeEEEEcCCC-eEEEEeCC-----CcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe
Q 010037 377 LEKPLHEFQGH--SSEVLDLSWSKNG-FLLSSSAD-----KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS 448 (519)
Q Consensus 377 ~~~~~~~~~~h--~~~V~~l~~sp~~-~L~sgs~D-----g~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs 448 (519)
.....+..+ ...+..++|+|+| +|+.++.+ +.|++||+.+++......... .. +.|+|.+++++++++
T Consensus 226 --~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 226 --SNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp --CCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEE
T ss_pred --CceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEec
Confidence 112222222 2357889999999 66666543 449999999887655443333 33 889984566777654
Q ss_pred ----------------CCCeEEEEEcCCCcEEeeccCCC-----------ceEEEEEeeCCCEEEEEec-CCeEEE--EE
Q 010037 449 ----------------IDGKVRIWEVRRCQVVDYTDIRE-----------IVSAVCYCPDGKGGIVGTM-TGNCRF--YD 498 (519)
Q Consensus 449 ----------------~Dg~V~iwd~~~~~~~~~~~~~~-----------~V~~v~~spdg~~l~sgs~-dg~v~i--wd 498 (519)
.+..|++||+.+++...+..+.. .+..++|+|||+.|+.++. ++...| ++
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 302 CDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 34789999999887655554443 2567899999998887765 454444 45
Q ss_pred CCCCe
Q 010037 499 IKGMQ 503 (519)
Q Consensus 499 l~~~~ 503 (519)
+.+++
T Consensus 382 ~~~~~ 386 (396)
T 3c5m_A 382 VPESY 386 (396)
T ss_dssp CCTTC
T ss_pred Ecccc
Confidence 54443
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.27 E-value=2e-10 Score=125.89 Aligned_cols=196 Identities=11% Similarity=0.027 Sum_probs=132.6
Q ss_pred cccceeecCCCCeEE-----eeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCc----
Q 010037 237 RHGSATLKPGDHELT-----LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT---- 307 (519)
Q Consensus 237 ~~~~~~~sp~g~~la-----sgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~---- 307 (519)
.+...+|+|||++|| .|+.+.+|++|++..+...... .+.... ...++|+|||+.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-----~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-----VIEGGK--YATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-----CBSCCT--TCCCEECTTSSEEEEEECCCCTTSC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-----ccCccc--ccceEEecCCCEEEEEEecCCCCCc
Confidence 345579999999999 5666679999999865532000 111111 157899999999999988776
Q ss_pred ---------EEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc
Q 010037 308 ---------VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (519)
Q Consensus 308 ---------I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 378 (519)
|++|++.++.....
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~--------------------------------------------------------- 217 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDT--------------------------------------------------------- 217 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCE---------------------------------------------------------
T ss_pred cccCCCCCEEEEEECCCCchhce---------------------------------------------------------
Confidence 88888766542100
Q ss_pred cceeEeeccCCCeeEEEEcCCC-eEEEEeCCC----cEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe---CC
Q 010037 379 KPLHEFQGHSSEVLDLSWSKNG-FLLSSSADK----TVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS---ID 450 (519)
Q Consensus 379 ~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg----~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs---~D 450 (519)
.+.....|...+..+.|+|+| +|+.++.++ .|.+|+..++.......+...+....+ | ++.+++... .+
T Consensus 218 -lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~-~g~l~~~s~~~~~~ 294 (695)
T 2bkl_A 218 -VVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-W-KDRFYVLTDEGAPR 294 (695)
T ss_dssp -EEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-E-TTEEEEEECTTCTT
T ss_pred -EEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-c-CCcEEEEECCCCCC
Confidence 011123355678899999999 777766555 677887766665555556666667767 5 455555544 25
Q ss_pred CeEEEEEcCCCcE---EeeccC--CCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 451 GKVRIWEVRRCQV---VDYTDI--REIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 451 g~V~iwd~~~~~~---~~~~~~--~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
+.|.+||+.++.. ..+..+ ...+..++|+ ++.++++...|+..+||.+.
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 8999999987652 333333 4567888888 77788888899987777543
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.26 E-value=1.9e-09 Score=106.78 Aligned_cols=234 Identities=9% Similarity=0.000 Sum_probs=151.6
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeec
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLD 320 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~ 320 (519)
+++. ++.+.++...++.|.+||....+.. ..+. .......++++++++.+++...++.|.+||..+++...
T Consensus 49 i~~~-~~~lyv~~~~~~~v~viD~~t~~~~-------~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 49 MVIR-DGIGWIVVNNSHVIFAIDINTFKEV-------GRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp EEEE-TTEEEEEEGGGTEEEEEETTTCCEE-------EEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred EEEE-CCEEEEEEcCCCEEEEEECcccEEE-------EEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 4443 4455566667899999998754421 1232 34568899999998555554489999999999998777
Q ss_pred eeeccCC-----CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEE
Q 010037 321 GFDVQDT-----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (519)
Q Consensus 321 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 395 (519)
.+..... .+..+.+ ....++.... ..+..+.+++...... +..+.. ......++
T Consensus 120 ~i~~g~~~~~~~~p~~i~~---~~~~lyv~~~-------------~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~ 178 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ---YGKYVYVNCW-------------SYQNRILKIDTETDKV----VDELTI-GIQPTSLV 178 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE---ETTEEEEEEC-------------TTCCEEEEEETTTTEE----EEEEEC-SSCBCCCE
T ss_pred EEEcCCccccCCCcceEEE---ECCEEEEEcC-------------CCCCEEEEEECCCCeE----EEEEEc-CCCccceE
Confidence 6665441 2223333 1122222211 1234555555544322 222322 23457889
Q ss_pred EcCCC-eEEEEeCC----------CcEEEEECCCCeEEEEecC--CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc
Q 010037 396 WSKNG-FLLSSSAD----------KTVRLWQVGIDRCLRVFSH--NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (519)
Q Consensus 396 ~sp~~-~L~sgs~D----------g~V~lWdl~~~~~~~~~~h--~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~ 462 (519)
++|+| +++++..+ +.|.++|..+++....+.. ......++|+| ++++|+++.. .|.+||+.+++
T Consensus 179 ~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 179 MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSS
T ss_pred EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCc
Confidence 99999 44444443 7899999999998877753 34789999999 8888877654 89999999887
Q ss_pred EEe--eccC-CCceEEEEEee-CCCEEEEE----ecCCeEEEEECCCCeeeec
Q 010037 463 VVD--YTDI-REIVSAVCYCP-DGKGGIVG----TMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 463 ~~~--~~~~-~~~V~~v~~sp-dg~~l~sg----s~dg~v~iwdl~~~~l~~~ 507 (519)
+.. +... ......++++| ++.++++. ..++.|.+||.....+..+
T Consensus 256 ~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i 308 (328)
T 3dsm_A 256 VPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEF 308 (328)
T ss_dssp CCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEE
T ss_pred eeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEE
Confidence 652 2222 46789999999 45555555 5688999999984334433
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.26 E-value=2.8e-10 Score=112.95 Aligned_cols=181 Identities=13% Similarity=0.142 Sum_probs=118.0
Q ss_pred eeecCCCCeEEee---------ecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC---Cc-
Q 010037 241 ATLKPGDHELTLG---------QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED---GT- 307 (519)
Q Consensus 241 ~~~sp~g~~lasg---------s~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D---g~- 307 (519)
.++ +|++++.. ..++.|.+|++...... .+ ..+..++|+|||++||.++.+ +.
T Consensus 20 ~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--------~l----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 20 PRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR--------FI----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp EEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE--------EE----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred ceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE--------Ec----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 445 77777653 23678999998754321 12 467889999999999988754 33
Q ss_pred -EEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec
Q 010037 308 -VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG 386 (519)
Q Consensus 308 -I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
|.+|++.+++... +..
T Consensus 86 ~l~~~~~~~g~~~~---------------------------------------------------------------l~~ 102 (347)
T 2gop_A 86 EIWVADLETLSSKK---------------------------------------------------------------ILE 102 (347)
T ss_dssp EEEEEETTTTEEEE---------------------------------------------------------------EEE
T ss_pred eEEEEECCCCceEE---------------------------------------------------------------EEc
Confidence 6667776554211 111
Q ss_pred cCCCeeEEEEcCCC-eEEEEeC---------------------------CCcEEEEECCCCeEEEEecCCCcEEEEEEee
Q 010037 387 HSSEVLDLSWSKNG-FLLSSSA---------------------------DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNP 438 (519)
Q Consensus 387 h~~~V~~l~~sp~~-~L~sgs~---------------------------Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp 438 (519)
+.. +..++|+|+| .|+.++. ...|.+||+.+++.+..+... .+..++|+|
T Consensus 103 ~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~sp 180 (347)
T 2gop_A 103 AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHR 180 (347)
T ss_dssp ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEET
T ss_pred CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCC
Confidence 122 7788888888 6666553 257999999998874444333 788999999
Q ss_pred CCCCEEEEEeCCC-------eEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecC--------CeEEEEECCCCe
Q 010037 439 VDDNYFISGSIDG-------KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMT--------GNCRFYDIKGMQ 503 (519)
Q Consensus 439 ~d~~~l~sgs~Dg-------~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~d--------g~v~iwdl~~~~ 503 (519)
++ +++++..++ ...||.+.+++...+..+ ..+..+ +|||+.|+.++.+ ..|.+|| +++
T Consensus 181 -dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~ 253 (347)
T 2gop_A 181 -DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE 253 (347)
T ss_dssp -TE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC
T ss_pred -Ce-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCc
Confidence 88 777776542 334444446655554444 455544 9999999887754 3688888 555
Q ss_pred eeec
Q 010037 504 IFDL 507 (519)
Q Consensus 504 l~~~ 507 (519)
...+
T Consensus 254 ~~~l 257 (347)
T 2gop_A 254 VMGI 257 (347)
T ss_dssp EEES
T ss_pred eEec
Confidence 4444
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.26 E-value=1.4e-09 Score=104.90 Aligned_cols=204 Identities=11% Similarity=0.121 Sum_probs=134.5
Q ss_pred cCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccC------CCCceEEEeecCCCCeEEeeccCCceeee
Q 010037 282 AHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQD------TDPSCLYFTINHLSQLIPIDVDKEKIDKT 355 (519)
Q Consensus 282 ~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (519)
+|-..+.+|+++++|+++++...++.|.+||.. ++....+.... ..+..+.+. .....++....
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~-~~~g~l~v~~~-------- 96 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVV-RNSGDIIVTER-------- 96 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEE-TTTTEEEEEEC--------
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEE-cCCCeEEEEcC--------
Confidence 455678999999999988888889999999986 44444432211 112222221 11112222111
Q ss_pred eeeccCCCeeEEEeCCccccccccceeEee-ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec---CCCc
Q 010037 356 KSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ-GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS---HNNY 430 (519)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~---h~~~ 430 (519)
..+..+..++.. ++.+..+. .+...+.+++++|++ ++++...++.|.+||.. ++.+..+. +...
T Consensus 97 -----~~~~~i~~~d~~-----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 97 -----SPTHQIQIYNQY-----GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEF 165 (286)
T ss_dssp -----GGGCEEEEECTT-----SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSS
T ss_pred -----CCCCEEEEECCC-----CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCC
Confidence 113344445422 12233332 244678999999999 66666778999999965 55566663 4457
Q ss_pred EEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccC--CCceEEEEEeeCCCEEEEEecCC-eEEEEECCCCeeeec
Q 010037 431 VTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI--REIVSAVCYCPDGKGGIVGTMTG-NCRFYDIKGMQIFDL 507 (519)
Q Consensus 431 V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~--~~~V~~v~~spdg~~l~sgs~dg-~v~iwdl~~~~l~~~ 507 (519)
+..|+++| +++++++...++.|++||.....+..+... ...+..++++|+|+++++...++ .|.+||..+..+..+
T Consensus 166 p~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 166 PNGVVVND-KQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISAL 244 (286)
T ss_dssp EEEEEECS-SSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEE
T ss_pred cEEEEECC-CCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEE
Confidence 89999999 888888888899999999865433344332 35789999999999888887776 999999765544333
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.24 E-value=7e-10 Score=109.91 Aligned_cols=203 Identities=16% Similarity=0.197 Sum_probs=134.7
Q ss_pred CCCEEEEEEccCCCEEEEEeCC------------------------CcEEEEecccCeeeceeeccC-CCCceEEEeecC
Q 010037 284 EGSILTMKFSLDGQYLASGGED------------------------GTVRVWKVIEHERLDGFDVQD-TDPSCLYFTINH 338 (519)
Q Consensus 284 ~~~I~~l~fspdg~~LaSgs~D------------------------g~I~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~ 338 (519)
-+.|.+|+++|+|+++++...+ +.|.+||..+++....+.... ..+..+++.+..
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888777 479999998887655443211 223334443222
Q ss_pred CCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe---------eccCCCeeEEEEcC-CC-eEEEEe-
Q 010037 339 LSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF---------QGHSSEVLDLSWSK-NG-FLLSSS- 406 (519)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~V~~l~~sp-~~-~L~sgs- 406 (519)
.++.... ....+..++..... ..+..+ .++......|+++| ++ ++++.+
T Consensus 103 --~l~v~d~--------------~~~~v~~~~~~g~~---~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 103 --NYWVTDV--------------ALHQVFKLDPHSKE---GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp --CEEEEET--------------TTTEEEEECTTCSS---CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred --CEEEEEC--------------CCCEEEEEeCCCCe---EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 2333222 23344444432110 012222 23455789999999 67 566665
Q ss_pred CCCcEEEEECCCCeEEEEecC-----------CCcEEEEEEeeCC-CCEEEEEeCCCeEEEEEcCCCcEEee---ccCCC
Q 010037 407 ADKTVRLWQVGIDRCLRVFSH-----------NNYVTSVAFNPVD-DNYFISGSIDGKVRIWEVRRCQVVDY---TDIRE 471 (519)
Q Consensus 407 ~Dg~V~lWdl~~~~~~~~~~h-----------~~~V~~v~fsp~d-~~~l~sgs~Dg~V~iwd~~~~~~~~~---~~~~~ 471 (519)
.++.|++|+ ..++.+..+.. -.....|+++| + ++++++...++.|++||..+++.+.. ..+..
T Consensus 164 ~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 164 CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR 241 (329)
T ss_dssp SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT
T ss_pred CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC
Confidence 689999999 56777777641 12489999999 6 78888888899999999998877743 34556
Q ss_pred ceEEEEEee------CCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 472 IVSAVCYCP------DGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 472 ~V~~v~~sp------dg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
.+.+++|+| +|+.+++...+..|++|++.++++...
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 788999999 333333333455899999988877654
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=8.2e-09 Score=104.22 Aligned_cols=243 Identities=9% Similarity=-0.069 Sum_probs=145.4
Q ss_pred ceeecCCCCeEEeee----------cCCeEEEeeCCcccccccccccc--ceeecCCCCEEEEEEccCCCEEEEEeC--C
Q 010037 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTG--QEFLAHEGSILTMKFSLDGQYLASGGE--D 305 (519)
Q Consensus 240 ~~~~sp~g~~lasgs----------~dg~I~vw~~~~~~~~~~~~~~~--~~l~~H~~~I~~l~fspdg~~LaSgs~--D 305 (519)
.++++|||++++++. .++.|.++|....... ..+... ..+. +......+.|+|||++|+.+.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~-~~i~~~~~~~~~-~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI-ADIELPDAPRFD-VGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE-EEEECCCccccc-cCCCccceEECCCCCEEEEEecCCC
Confidence 579999999998875 3678999998643321 111100 0000 0123457899999999998874 4
Q ss_pred CcEEEEecccCeeece-eeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccce--e
Q 010037 306 GTVRVWKVIEHERLDG-FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPL--H 382 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~ 382 (519)
+.|.++| .+++.... +.... ++.+.+......... +.++.+..++. ......... .
T Consensus 148 ~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~---------------~~dg~~~~vd~-~g~~~~~~~~~~ 206 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLL---------------CAQGGLAKTDH-AGGAAGAGLVGA 206 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEE---------------cCCCCEEEEEC-CCcEEEEEeccc
Confidence 7899999 99887666 54322 233333222211111 11222222222 111100000 0
Q ss_pred EeeccCCC-eeEEEEcCCC-eEEEEeCCCcEEEEECCCCe--EEEEec-----------CCCcEEEEEEeeCCCCEEEEE
Q 010037 383 EFQGHSSE-VLDLSWSKNG-FLLSSSADKTVRLWQVGIDR--CLRVFS-----------HNNYVTSVAFNPVDDNYFISG 447 (519)
Q Consensus 383 ~~~~h~~~-V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~--~~~~~~-----------h~~~V~~v~fsp~d~~~l~sg 447 (519)
.+ ....+ .....+.+++ .++..+..+.|.+.|+.+.. .+..+. .......+.++| +++.+++.
T Consensus 207 ~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~ 284 (373)
T 2mad_H 207 ML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLL 284 (373)
T ss_pred cc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC-CCCEEEEE
Confidence 00 11111 1234455655 44444467899999987653 233332 123345578899 77766665
Q ss_pred eC----------CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCC-EEEEEe-cCCeEEEEECCCCeeeec
Q 010037 448 SI----------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK-GGIVGT-MTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 448 s~----------Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~-~l~sgs-~dg~v~iwdl~~~~l~~~ 507 (519)
.. .+.|.++|+.+.+++...........++|+|||+ +++++. .++.|.+||+.++++...
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 43 3589999999999987666666789999999999 777776 489999999999987644
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.22 E-value=1.7e-09 Score=118.86 Aligned_cols=219 Identities=11% Similarity=0.034 Sum_probs=131.3
Q ss_pred cCCCCEEEEEEccCCCEEEEEeCCC-----cEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeee
Q 010037 282 AHEGSILTMKFSLDGQYLASGGEDG-----TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (519)
Q Consensus 282 ~H~~~I~~l~fspdg~~LaSgs~Dg-----~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (519)
+|...+..++|||||++||.+..++ .|++||+.+++...... .......+.|++++...++.............
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3555788999999999998776543 89999999988765321 12224456676665443333221110000000
Q ss_pred eeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeC-----CCcEEEEECCC------C--eEE
Q 010037 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSA-----DKTVRLWQVGI------D--RCL 422 (519)
Q Consensus 357 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~-----Dg~V~lWdl~~------~--~~~ 422 (519)
.........+.+++..........+.....|...+..+.|+|+| +|+.++. +..|++||+.+ + ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 00001122344444433221111222222355668899999999 6666554 57899999986 4 333
Q ss_pred EEecCCCcEEEEEEeeCCCCEEEEEeCC----CeEEEEEcCCCc---EEeeccCCC--ceEEEEEeeCCCEEEEEecCCe
Q 010037 423 RVFSHNNYVTSVAFNPVDDNYFISGSID----GKVRIWEVRRCQ---VVDYTDIRE--IVSAVCYCPDGKGGIVGTMTGN 493 (519)
Q Consensus 423 ~~~~h~~~V~~v~fsp~d~~~l~sgs~D----g~V~iwd~~~~~---~~~~~~~~~--~V~~v~~spdg~~l~sgs~dg~ 493 (519)
....+...+.. .|+| ++..|+..+.. +.|.+||+.++. ...+..+.. .+..++|++++.++++...++.
T Consensus 281 ~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTE
T ss_pred EeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCE
Confidence 33445555554 4888 77766665543 369999998764 233444433 6888999988888888888885
Q ss_pred --EEEEECCCCe
Q 010037 494 --CRFYDIKGMQ 503 (519)
Q Consensus 494 --v~iwdl~~~~ 503 (519)
|++|++.+++
T Consensus 359 ~~l~~~~~~~g~ 370 (710)
T 2xdw_A 359 NTLQLHDLATGA 370 (710)
T ss_dssp EEEEEEETTTCC
T ss_pred EEEEEEECCCCC
Confidence 6677875554
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.20 E-value=2e-10 Score=125.89 Aligned_cols=194 Identities=11% Similarity=0.001 Sum_probs=128.9
Q ss_pred ecCCCCeEEeeecCC---eEEEe--eCCccccccccccccc-eeecCCCCEEEEEEccCCCEEE-----EEeCCCcEEEE
Q 010037 243 LKPGDHELTLGQRMR---RVRVH--PVKKQSRELSSLYTGQ-EFLAHEGSILTMKFSLDGQYLA-----SGGEDGTVRVW 311 (519)
Q Consensus 243 ~sp~g~~lasgs~dg---~I~vw--~~~~~~~~~~~~~~~~-~l~~H~~~I~~l~fspdg~~La-----Sgs~Dg~I~iW 311 (519)
..|+|.+++....++ .-.|| +....... .+.... .-.+|...+..++|||||++|| .|+.+..|++|
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEK--VLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCE--EEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcE--EEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEE
Confidence 447888887765543 33444 33222111 111000 1134666799999999999998 44556789999
Q ss_pred ecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCe
Q 010037 312 KVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (519)
Q Consensus 312 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 391 (519)
|+.+++....- .+. ....
T Consensus 153 dl~tg~~~~~~------------------------------------------------------------~~~--~~~~ 170 (695)
T 2bkl_A 153 DVDSGEWSKVD------------------------------------------------------------VIE--GGKY 170 (695)
T ss_dssp ETTTCCBCSSC------------------------------------------------------------CBS--CCTT
T ss_pred ECCCCCCcCCc------------------------------------------------------------ccC--cccc
Confidence 99887632000 000 0112
Q ss_pred eEEEEcCCC-eEEEEeCCCc-------------EEEEECCCCeE--EEEec---CCCcEEEEEEeeCCCCEEEEEeCCC-
Q 010037 392 LDLSWSKNG-FLLSSSADKT-------------VRLWQVGIDRC--LRVFS---HNNYVTSVAFNPVDDNYFISGSIDG- 451 (519)
Q Consensus 392 ~~l~~sp~~-~L~sgs~Dg~-------------V~lWdl~~~~~--~~~~~---h~~~V~~v~fsp~d~~~l~sgs~Dg- 451 (519)
..++|+|+| .|+.++.|.. |++|++.++.. ...+. +...+..+.|+| ++++|+.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~ 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGW 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCC
Confidence 578999999 8888888776 99999998762 23332 556899999999 899888877666
Q ss_pred ---eEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEec----CCeEEEEECCCCe
Q 010037 452 ---KVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTM----TGNCRFYDIKGMQ 503 (519)
Q Consensus 452 ---~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~----dg~v~iwdl~~~~ 503 (519)
.|++|+..+++...+..+...+....+ ++|. |+..+. ++.|.+||+.+++
T Consensus 250 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred CceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 788887776666666666666666666 7777 555443 5789999997764
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=1.1e-08 Score=99.71 Aligned_cols=251 Identities=8% Similarity=-0.001 Sum_probs=150.1
Q ss_pred ccceeecCCCCeEEe-------eecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC-CCEEEEEeCCCcEE
Q 010037 238 HGSATLKPGDHELTL-------GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTVR 309 (519)
Q Consensus 238 ~~~~~~sp~g~~las-------gs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~LaSgs~Dg~I~ 309 (519)
..+++|++++.++++ +..++.|.+|+........ +.. ....++...+.+++++++ |+++++.. .+.|.
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV--ICK-PEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE--EEC-CEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE--EEe-cccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345789999988888 7888999999976544221 100 011235567999999999 76555444 44788
Q ss_pred EEecccCeeece-eeccC----CCCceEEEeecCCCCeEEeeccCCce-eeeeeeccCCCeeEEEeCCccccccccceeE
Q 010037 310 VWKVIEHERLDG-FDVQD----TDPSCLYFTINHLSQLIPIDVDKEKI-DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE 383 (519)
Q Consensus 310 iWd~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
+||.. ++.... ..... ..+..+.+.+. ..++......... .............+..++.. .. +..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~~ 166 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-----MIQ 166 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-----EEE
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEECCC-CC-----EEE
Confidence 99987 654322 11111 12333433332 2232222111000 00000000112344444432 11 122
Q ss_pred eeccCCCeeEEEEc----CCC-eEEEE-eCCCcEEEEECC-CCeE-----EEEec-CC-CcEEEEEEeeCCCCEEEEEeC
Q 010037 384 FQGHSSEVLDLSWS----KNG-FLLSS-SADKTVRLWQVG-IDRC-----LRVFS-HN-NYVTSVAFNPVDDNYFISGSI 449 (519)
Q Consensus 384 ~~~h~~~V~~l~~s----p~~-~L~sg-s~Dg~V~lWdl~-~~~~-----~~~~~-h~-~~V~~v~fsp~d~~~l~sgs~ 449 (519)
+..+......++|+ |++ .|+.+ ..++.|.+||+. .++. ...+. +. ..+..+++++ +++++++...
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~ 245 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWG 245 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEET
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcC
Confidence 22334456889999 998 55544 567899999986 4442 22222 22 6688999999 8998888888
Q ss_pred CCeEEEEEcCCCcEEe-eccCCCceEEEEEeeCCCEEEEE-ecCCeEEEEECCCC
Q 010037 450 DGKVRIWEVRRCQVVD-YTDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIKGM 502 (519)
Q Consensus 450 Dg~V~iwd~~~~~~~~-~~~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~~~ 502 (519)
++.|.+||..+++.+. ...+...+.+++|+|+|+.|+++ ..++.|..|++...
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8999999998666543 44445789999999999955554 45688999998753
No 192
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.20 E-value=2.9e-08 Score=95.62 Aligned_cols=237 Identities=6% Similarity=0.004 Sum_probs=151.1
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
.+.++++.|+|.+.++...++.|.+|+.. .... .. .+..+...+.+|++.++|.++++...++.|..|+.. +
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~--~~----~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKIT--EY----PLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE--EE----ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCeE--Ee----cCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 44568899999988777668999999976 3211 11 111245679999999999988887778889999975 3
Q ss_pred eeeceeecc--CCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEE
Q 010037 317 ERLDGFDVQ--DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (519)
Q Consensus 317 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 394 (519)
+ ...+... ...+..+.+. ....++.... ....+..++.. .... ......+...+..+
T Consensus 88 ~-~~~~~~~~~~~~~~~i~~~--~~g~l~v~~~--------------~~~~i~~~d~~-g~~~---~~~~~~~~~~~~~i 146 (299)
T 2z2n_A 88 I-IKEYTLPNPDSAPYGITEG--PNGDIWFTEM--------------NGNRIGRITDD-GKIR---EYELPNKGSYPSFI 146 (299)
T ss_dssp C-EEEEECSSTTCCEEEEEEC--TTSCEEEEET--------------TTTEEEEECTT-CCEE---EEECSSTTCCEEEE
T ss_pred c-EEEEeCCCcCCCceeeEEC--CCCCEEEEec--------------CCceEEEECCC-CCEE---EecCCCCCCCCceE
Confidence 2 2222221 1122222222 1222222211 12233334331 1000 01112244578999
Q ss_pred EEcCCC-eEEEEeCCCcEEEEECCCCeEEEE-ec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee--ccC
Q 010037 395 SWSKNG-FLLSSSADKTVRLWQVGIDRCLRV-FS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDI 469 (519)
Q Consensus 395 ~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~-~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~--~~~ 469 (519)
++.+++ .+++...++.|..||. +++.... .. ....+.+++++| +++++++...++.|.+||. +++...+ ...
T Consensus 147 ~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~ 223 (299)
T 2z2n_A 147 TLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTP 223 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred EEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCC
Confidence 999999 5555556789999999 6665543 22 455688999999 7887777767889999999 6665543 234
Q ss_pred CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 470 REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 470 ~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
...+.+++++++|+++++...++.|.+||. ++++..
T Consensus 224 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~ 259 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEE 259 (299)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEE
T ss_pred CCCceeEEECCCCCEEEeccCCceEEEECC-CCceEE
Confidence 467899999999996666557789999998 455443
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=5.6e-09 Score=111.12 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=139.9
Q ss_pred ecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecc--cCeeec
Q 010037 243 LKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI--EHERLD 320 (519)
Q Consensus 243 ~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~--~~~~~~ 320 (519)
.+|.+.++++...++.|.++|....... ..+.. ...+..+.|+|||++|++++.|+.|.+||+. +++.+.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~-------~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIK-------TVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEE-------EEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEE-------EEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE
Confidence 4455667777888999999998754321 12222 2356789999999999999999999999985 444322
Q ss_pred eeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEc---
Q 010037 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS--- 397 (519)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s--- 397 (519)
.+ .. ......++|+
T Consensus 235 ~i--------------------------------------------------------------~~-G~~P~~ia~s~~~ 251 (567)
T 1qks_A 235 EI--------------------------------------------------------------KI-GSEARSIETSKME 251 (567)
T ss_dssp EE--------------------------------------------------------------EC-CSEEEEEEECCST
T ss_pred EE--------------------------------------------------------------ec-CCCCceeEEcccc
Confidence 11 11 1234688999
Q ss_pred -CCC-eEEEE-eCCCcEEEEECCCCeEEEEecC------------CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc
Q 010037 398 -KNG-FLLSS-SADKTVRLWQVGIDRCLRVFSH------------NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (519)
Q Consensus 398 -p~~-~L~sg-s~Dg~V~lWdl~~~~~~~~~~h------------~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~ 462 (519)
|+| +++++ ..+++|.|+|..+.++++.+.- ...+..+..++....+++....+|+|.++|..+.+
T Consensus 252 ~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~ 331 (567)
T 1qks_A 252 GWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN 331 (567)
T ss_dssp TCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS
T ss_pred CCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc
Confidence 688 55554 4669999999999999887752 12678899998445555666677999999998764
Q ss_pred EE--eeccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCCeeee
Q 010037 463 VV--DYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 463 ~~--~~~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~~l~~ 506 (519)
.+ ...........+.|+|+|++++++. .++.|.++|+.++++..
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 33 2333445677899999999987766 57889999999998754
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.17 E-value=3.9e-09 Score=102.54 Aligned_cols=204 Identities=10% Similarity=0.008 Sum_probs=128.9
Q ss_pred ceeecCCCCEEEEEEccCCC-EEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeee
Q 010037 278 QEFLAHEGSILTMKFSLDGQ-YLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTK 356 (519)
Q Consensus 278 ~~l~~H~~~I~~l~fspdg~-~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (519)
..+..+.....+++|+|+|+ +++++..++.|..|+..++ ...+..+...+..+.+.+.. .++...
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg--~l~v~~---------- 86 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG--HLIACS---------- 86 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC--CEEEEE----------
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC--cEEEEe----------
Confidence 34555667788999999998 7888888999999999876 44444443334444443322 222222
Q ss_pred eeccCCCeeEEEeCCccccccccceeEeec-cCCCeeEEEEcCCC-eEEE----Ee-------------CCCcEEEEECC
Q 010037 357 SLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-HSSEVLDLSWSKNG-FLLS----SS-------------ADKTVRLWQVG 417 (519)
Q Consensus 357 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~-~L~s----gs-------------~Dg~V~lWdl~ 417 (519)
.....+..++........ ......+ ....+.+++++|+| ++++ |+ ..+.|..++..
T Consensus 87 ----~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 87 ----HGLRRLERQREPGGEWES-IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp ----TTTTEEEEECSTTCCEEE-EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred ----cCCCeEEEEcCCCCcEEE-EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 122334444442211100 0000111 12356789999999 5555 32 12455566655
Q ss_pred CCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcC-CCcE---E-eeccCCCceEEEEEeeCCCEEEEEecCC
Q 010037 418 IDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR-RCQV---V-DYTDIREIVSAVCYCPDGKGGIVGTMTG 492 (519)
Q Consensus 418 ~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~-~~~~---~-~~~~~~~~V~~v~~spdg~~l~sgs~dg 492 (519)
++......+....+.++|+| +++++++.+.++.|.+|++. ++++ . .+..+...+..++++++|+++++. ++
T Consensus 162 -g~~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~ 237 (296)
T 3e5z_A 162 -GTLSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GD 237 (296)
T ss_dssp -SCEEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TT
T ss_pred -CCEEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CC
Confidence 55555555777789999999 88888777888999999997 5554 1 122344556789999999866555 88
Q ss_pred eEEEEECCCCee
Q 010037 493 NCRFYDIKGMQI 504 (519)
Q Consensus 493 ~v~iwdl~~~~l 504 (519)
.|.+||..+..+
T Consensus 238 ~v~~~~~~g~~~ 249 (296)
T 3e5z_A 238 GVHVLTPDGDEL 249 (296)
T ss_dssp EEEEECTTSCEE
T ss_pred eEEEECCCCCEE
Confidence 999999975443
No 195
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.13 E-value=4.3e-10 Score=113.41 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=114.0
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCee
Q 010037 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLT 365 (519)
Q Consensus 286 ~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 365 (519)
+++.+++++...+|++|+.++ +++|++........ .....
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~--~~~~~------------------------------------- 78 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHIT--SDSTP------------------------------------- 78 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHH--SSSCC-------------------------------------
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhc--ccccc-------------------------------------
Confidence 688999999999999999985 66699765431100 00000
Q ss_pred EEEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCE
Q 010037 366 CVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNY 443 (519)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~ 443 (519)
..+... ..+.. |+.|+| ++ .|+++ .++.|++||+.+....... .|...+.++.+.+ . .
T Consensus 79 ------------~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~-p--~ 138 (388)
T 1xip_A 79 ------------LTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN-N--T 138 (388)
T ss_dssp ------------CCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS-S--E
T ss_pred ------------ccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecC-C--C
Confidence 001111 22455 999999 66 88877 8899999999876544444 3777788887766 2 3
Q ss_pred EEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 444 FISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 444 l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
+++++.||.|.+||+.+++... +...|++++|+|+| +++|..||++++|+..++++
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEE
T ss_pred EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccc
Confidence 8888999999999999887654 45689999999999 68899999999999888774
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.11 E-value=1.5e-08 Score=107.84 Aligned_cols=256 Identities=12% Similarity=0.095 Sum_probs=157.4
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCC--ccccccccccccceeecCCCCEEEEEEc----cCCCEEEEEeC-CCcEEEEe
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVK--KQSRELSSLYTGQEFLAHEGSILTMKFS----LDGQYLASGGE-DGTVRVWK 312 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~--~~~~~~~~~~~~~~l~~H~~~I~~l~fs----pdg~~LaSgs~-Dg~I~iWd 312 (519)
.++|+|+|+++++++.++.|.+||+. .... . ..+.... ....++|+ |||++++++.. +++|.|+|
T Consensus 201 ~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~-v------~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 201 ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT-V------AEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCCE-E------EEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred ceEECCCCCEEEEEcCCCeEEEEECCCCCCcE-e------EEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 57999999999999999999999985 2221 1 2333322 35789999 69998887765 58999999
Q ss_pred cccCeeeceeeccCC-----------CCceEEEee---------cCCCCeEEeeccCCce--------------------
Q 010037 313 VIEHERLDGFDVQDT-----------DPSCLYFTI---------NHLSQLIPIDVDKEKI-------------------- 352 (519)
Q Consensus 313 ~~~~~~~~~~~~~~~-----------~~~~~~~~~---------~~~~~~~~~~~~~~~~-------------------- 352 (519)
..+.+.+..+..... .+..+..+. .....+..++......
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd 352 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 352 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCC
Confidence 999888777654321 111222221 1122222222211100
Q ss_pred eeeeeeccCCCeeEEEeCCccccccccceeEee-----ccCCCeeEEEEcCCC--eEEEEe-CCCcEEEEECCC------
Q 010037 353 DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ-----GHSSEVLDLSWSKNG--FLLSSS-ADKTVRLWQVGI------ 418 (519)
Q Consensus 353 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~V~~l~~sp~~--~L~sgs-~Dg~V~lWdl~~------ 418 (519)
.+...+.......+.+++.....+ +..+. .|.+....+ ++|++ .++++. .+++|.++|..+
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~kl----~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~ 427 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGKL----VAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDN 427 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEE----EEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred CCEEEEEeCCCCeEEEEECCCCcE----EEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccc
Confidence 011111222334455555544332 22222 233222122 57875 444553 568999999987
Q ss_pred -CeEEEEecC-CCcEEEEEEeeCCCCEEEEEeC-------CCeEEEEEcCCC---------cEEee---c---cCCCceE
Q 010037 419 -DRCLRVFSH-NNYVTSVAFNPVDDNYFISGSI-------DGKVRIWEVRRC---------QVVDY---T---DIREIVS 474 (519)
Q Consensus 419 -~~~~~~~~h-~~~V~~v~fsp~d~~~l~sgs~-------Dg~V~iwd~~~~---------~~~~~---~---~~~~~V~ 474 (519)
.+.++.+.. ...-..|..+| +++++.+... .++|.|+|+.+. +.+.. . .....+.
T Consensus 428 ~~kvv~~i~~~g~g~~~i~~~p-~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 428 AWKILDSFPALGGGSLFIKTHP-NSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp BTSEEEEEECSCSCCCCEECCT-TCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred cCEEEEEEecCCCCCEEEEeCC-CCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 567777763 23334577899 8888888663 359999999876 22211 1 1245788
Q ss_pred EEEEeeCCCEEEEEec-----CCeEEEEECCCCeeeeccc
Q 010037 475 AVCYCPDGKGGIVGTM-----TGNCRFYDIKGMQIFDLST 509 (519)
Q Consensus 475 ~v~~spdg~~l~sgs~-----dg~v~iwdl~~~~l~~~~~ 509 (519)
.+.|+|+|+.+.++.. ++.|.|+|.+++++...-.
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 9999999999888743 7899999999999876533
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.10 E-value=1.4e-07 Score=90.85 Aligned_cols=233 Identities=5% Similarity=-0.010 Sum_probs=143.1
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~ 317 (519)
+..++++++|.+.++...++.|..|+..... ... .+..+...+..+++.++|+++++...++.|.+||. +++
T Consensus 59 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~---~~~----~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 59 VMCLTISSDGEVWFTENAANKIGRITKKGII---KEY----TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTSCE---EEE----ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred eeeEEECCCCCEEEeCCCCCeEEEECCCCcE---EEE----eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 3457889999988887778899999875211 111 11124457899999999998888777889999998 544
Q ss_pred eeceeeccC--CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEE
Q 010037 318 RLDGFDVQD--TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (519)
Q Consensus 318 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 395 (519)
.. .+.... ..+..+.+.+ ...++... .....+..++. ...+. ...+..+...+.+++
T Consensus 131 ~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~--------------~~~~~i~~~~~-~g~~~---~~~~~~~~~~~~~i~ 189 (299)
T 2z2n_A 131 IR-EYELPNKGSYPSFITLGS--DNALWFTE--------------NQNNAIGRITE-SGDIT---EFKIPTPASGPVGIT 189 (299)
T ss_dssp EE-EEECSSTTCCEEEEEECT--TSCEEEEE--------------TTTTEEEEECT-TCCEE---EEECSSTTCCEEEEE
T ss_pred EE-EecCCCCCCCCceEEEcC--CCCEEEEe--------------CCCCEEEEEcC-CCcEE---EeeCCCCCCcceeEE
Confidence 32 222111 1122222221 12222221 11223333433 11110 001223445688999
Q ss_pred EcCCC-eEEEEeCCCcEEEEECCCCeEEEE-ec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee--ccCC
Q 010037 396 WSKNG-FLLSSSADKTVRLWQVGIDRCLRV-FS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDIR 470 (519)
Q Consensus 396 ~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~-~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~--~~~~ 470 (519)
+.+++ ++++...++.|.+||. +++.... .. +...+.+++++| +++++++...++.|.+||. +++...+ ....
T Consensus 190 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~ 266 (299)
T 2z2n_A 190 KGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKS 266 (299)
T ss_dssp ECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET-TTEEEEEECSSSS
T ss_pred ECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC-CCceEEEeCCCCC
Confidence 99998 5555556789999999 6664432 22 456799999999 7887777667889999999 4554433 2344
Q ss_pred CceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 471 ~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
..+.++++ ++|+++++.. .+.+..++..++++
T Consensus 267 ~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 267 AEPHGICF-DGETIWFAME-CDKIGKLTLIKDNM 298 (299)
T ss_dssp CCEEEEEE-CSSCEEEEET-TTEEEEEEEC----
T ss_pred CccceEEe-cCCCEEEEec-CCcEEEEEcCcccC
Confidence 67899999 8888666544 67788888776543
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.07 E-value=1.8e-08 Score=101.28 Aligned_cols=256 Identities=10% Similarity=0.020 Sum_probs=156.4
Q ss_pred eeecCCCCeEEeeec-----CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe----------CC
Q 010037 241 ATLKPGDHELTLGQR-----MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------ED 305 (519)
Q Consensus 241 ~~~sp~g~~lasgs~-----dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs----------~D 305 (519)
....|+++.+++... ++.|.+.|....+.. ..+..-..+ . +.++|||++|+.+. .+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~-------~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI-------GMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE-------EEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEE-------EEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 466799998887655 689999998754421 233333444 4 99999999887765 36
Q ss_pred CcEEEEecccCeeeceeeccC-------CCCceEEEeecC----------CCCeEEeeccCCceeeeeee----------
Q 010037 306 GTVRVWKVIEHERLDGFDVQD-------TDPSCLYFTINH----------LSQLIPIDVDKEKIDKTKSL---------- 358 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~-------~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---------- 358 (519)
+.|.+||..+.+.+..+.... ..+..+.++++. .+.+..++....+......+
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g 188 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTA 188 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCC
Confidence 789999999999888876543 123334443332 23344444444433322221
Q ss_pred -----ccCCCeeEEEeCCcc-ccccccceeEeeccCCCee-EEEEc-CCCeEEEEeCCCcEEEEECCCCe--EEEEec--
Q 010037 359 -----RKSSDLTCVVLPPKV-FRLLEKPLHEFQGHSSEVL-DLSWS-KNGFLLSSSADKTVRLWQVGIDR--CLRVFS-- 426 (519)
Q Consensus 359 -----~~s~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~V~-~l~~s-p~~~L~sgs~Dg~V~lWdl~~~~--~~~~~~-- 426 (519)
..+.++...+..... ..+.......+..-...+. ...|. ++|.++-.+.+++|.+.|+.++. .+..+.
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~ 268 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEAL 268 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESS
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecc
Confidence 222333333333322 1110000000111112221 24564 56755557778999999997664 332221
Q ss_pred ---------CCCcEEEEEEeeCCCCEEEEEeC----------CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCC-EEE
Q 010037 427 ---------HNNYVTSVAFNPVDDNYFISGSI----------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK-GGI 486 (519)
Q Consensus 427 ---------h~~~V~~v~fsp~d~~~l~sgs~----------Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~-~l~ 486 (519)
.......++++| +++.++.... ...|.+.|+.+++++........+..++++||++ +|+
T Consensus 269 ~~~~~~~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly 347 (386)
T 3sjl_D 269 TEAERADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLY 347 (386)
T ss_dssp CHHHHHTTEEECSSSCEEEET-TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEE
T ss_pred ccccccccccCCCcceeeECC-CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEE
Confidence 122334577788 6666666542 2579999999999997766667889999999997 666
Q ss_pred EE-ecCCeEEEEECCCCeeee
Q 010037 487 VG-TMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 487 sg-s~dg~v~iwdl~~~~l~~ 506 (519)
+. ..++.|.++|..+++++.
T Consensus 348 ~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 348 ALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEETTTTEEEEEETTTCCEEE
T ss_pred EEcCCCCeEEEEECCCCcEEE
Confidence 65 458999999999998764
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.07 E-value=4.1e-08 Score=100.38 Aligned_cols=231 Identities=15% Similarity=0.066 Sum_probs=145.5
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCC--cEEEEecc
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDG--TVRVWKVI 314 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg--~I~iWd~~ 314 (519)
....++++|++.++++...++.|++|+........ + ... ..... ++|+++++.|+.+..++ .|.+|+..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~--~-----~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT--V-----HPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE--E-----EET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE--e-----ecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 34458999999988888888999999987443211 1 111 22233 89999999999888766 78888876
Q ss_pred cCeeecee----eccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe-----e
Q 010037 315 EHERLDGF----DVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-----Q 385 (519)
Q Consensus 315 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~ 385 (519)
.+.....+ ......+..+.+.+... .++... ....+..++..... ...+ .
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g-~lyv~d---------------~~~~I~~~d~~~~~-----~~~~~~~~~~ 261 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEE-WLYFVD---------------SNKNFGRFNVKTQE-----VTLIKQLELS 261 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSS-EEEEEC---------------TTCEEEEEETTTCC-----EEEEEECCCC
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCC-eEEEEE---------------CCCcEEEEECCCCC-----EEEEeccccc
Confidence 65433222 10222333444433221 122111 12233333322111 1111 1
Q ss_pred ccCCCe--eEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEecCC---------------CcEEEEEEeeCCCCEEEE
Q 010037 386 GHSSEV--LDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFSHN---------------NYVTSVAFNPVDDNYFIS 446 (519)
Q Consensus 386 ~h~~~V--~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~---------------~~V~~v~fsp~d~~~l~s 446 (519)
++...- ..++|+|+ + ++++-..++.|+.|+.... ......+. .....|+++| +++++++
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyva 339 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIV 339 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEE
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEE
Confidence 122222 38999995 5 5566667889999997754 32222222 4588999999 8888888
Q ss_pred Ee-CCCeEEEEEcCCCcEEeeccC---------------CCceEEEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 447 GS-IDGKVRIWEVRRCQVVDYTDI---------------REIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 447 gs-~Dg~V~iwd~~~~~~~~~~~~---------------~~~V~~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
-. .++.|+.|++.++.+..+.++ -.....++++|+|.++++-..++.|+.+++
T Consensus 340 d~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 87 889999999888877655443 245889999999888888788888988875
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.06 E-value=3.3e-07 Score=88.19 Aligned_cols=235 Identities=5% Similarity=-0.021 Sum_probs=149.1
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~ 317 (519)
..++++.++|.+.++...++.|.+|+.. .... .. .+..+...+..|++.++|+++++...++.|..||.. ++
T Consensus 22 p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~--~~----~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKANKISSLDQS-GRIK--EF----EVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EE----ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cceeeECCCCCEEEEcCCCCeEEEECCC-CceE--EE----ECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 3457899999988877778999999876 3221 11 112334678999999999988877768889999987 44
Q ss_pred eeceeeccC--CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEE
Q 010037 318 RLDGFDVQD--TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (519)
Q Consensus 318 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 395 (519)
. ..+.... ..+..+.+. ....++.... ....+..++.. .... ...+......+.+++
T Consensus 94 ~-~~~~~~~~~~~~~~i~~~--~~g~l~v~~~--------------~~~~i~~~~~~-g~~~---~~~~~~~~~~~~~i~ 152 (300)
T 2qc5_A 94 F-TEYPLPQPDSGPYGITEG--LNGDIWFTQL--------------NGDRIGKLTAD-GTIY---EYDLPNKGSYPAFIT 152 (300)
T ss_dssp E-EEEECSSTTCCEEEEEEC--STTCEEEEET--------------TTTEEEEECTT-SCEE---EEECSSTTCCEEEEE
T ss_pred e-EEecCCCCCCCCccceEC--CCCCEEEEcc--------------CCCeEEEECCC-CCEE---EccCCCCCCCceeEE
Confidence 3 2232221 122222222 2222222221 12233333332 1110 011122345788999
Q ss_pred EcCCC-eEEEEeCCCcEEEEECCCCeEEEEe--cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee--ccCC
Q 010037 396 WSKNG-FLLSSSADKTVRLWQVGIDRCLRVF--SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDIR 470 (519)
Q Consensus 396 ~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~--~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~--~~~~ 470 (519)
+.+++ .+++...++.|..||. +++..... .+...+..+++++ +++++++....+.|.+||. +++.... ....
T Consensus 153 ~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 153 LGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPN 229 (300)
T ss_dssp ECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred ECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCC
Confidence 99998 5555555788999998 55544322 1445789999999 8888877777788999998 5555433 2345
Q ss_pred CceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 471 ~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
..+.++++.++|+++++...++.|..||. ++++.
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 263 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ 263 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE
Confidence 66899999999996666656789999998 45443
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.05 E-value=2.7e-07 Score=89.76 Aligned_cols=227 Identities=9% Similarity=0.075 Sum_probs=139.5
Q ss_pred eeecCC-CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeee
Q 010037 241 ATLKPG-DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL 319 (519)
Q Consensus 241 ~~~sp~-g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~ 319 (519)
..|+|+ +.++++....+.|..|+....... ...+...+.+++++++|+++++ . ++.|.+||..+++..
T Consensus 18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~---------~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ---------RVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEE---------EEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CeEECCCCEEEEEECCCCEEEEEECCCCcEE---------EEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 578885 456666777899999998754321 1124567999999999995554 3 567999999877654
Q ss_pred ceeeccCCC----CceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEE
Q 010037 320 DGFDVQDTD----PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (519)
Q Consensus 320 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 395 (519)
......... +..+.+. ....++......... ........+.+..++... .+..+..+......++
T Consensus 87 ~~~~~~~~~~~~~~~di~~d--~dG~l~~~~~~~~~~---~~~~~~~~~~l~~~d~~g------~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVD--PAGRYFAGTMAEETA---PAVLERHQGALYSLFPDH------HVKKYFDQVDISNGLD 155 (297)
T ss_dssp EEEECCTTCSSEEEEEEEEC--TTSCEEEEEEECCSB---TTBCCTTCEEEEEECTTS------CEEEEEEEESBEEEEE
T ss_pred EEEecCCCCCCCCCCCEEEC--CCCCEEEecCCcccc---cccccCCCcEEEEEECCC------CEEEEeeccccccceE
Confidence 332221111 1112222 222233222111100 000001223344443321 1122233345568899
Q ss_pred EcCCC-eE-EEEeCCCcEEEEEC--CCCeEE--EEe---c-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 396 WSKNG-FL-LSSSADKTVRLWQV--GIDRCL--RVF---S-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 396 ~sp~~-~L-~sgs~Dg~V~lWdl--~~~~~~--~~~---~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
|+|++ .| ++.+.++.|.+|++ .++... +.+ . +......+++++ ++++.++...++.|.+||..+++++.
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 99998 44 56667889999997 455432 222 2 346788999999 88988888888999999999888775
Q ss_pred -eccCCCceEEEEEe-eCCCEEEEEec
Q 010037 466 -YTDIREIVSAVCYC-PDGKGGIVGTM 490 (519)
Q Consensus 466 -~~~~~~~V~~v~~s-pdg~~l~sgs~ 490 (519)
+..+...+++++|. |+++.|++++.
T Consensus 235 ~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 34444689999998 89887776654
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.04 E-value=2.4e-08 Score=110.17 Aligned_cols=245 Identities=12% Similarity=-0.004 Sum_probs=143.2
Q ss_pred ccceeecCCCCeEEeeecC-----CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCc-----
Q 010037 238 HGSATLKPGDHELTLGQRM-----RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT----- 307 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~d-----g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~----- 307 (519)
+...+|+|||++||.+..+ .+|++|++..+.... ...+...+..++|+|| +.|+.++.|+.
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~--------~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA--------DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE--------EEEEEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC--------ccCCCceeccEEEECC-CEEEEEEecCcccccc
Confidence 4457999999999886654 469999998655311 1111112357899999 99988887654
Q ss_pred ---------EEEEecccCeeece--eeccCC--CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccc
Q 010037 308 ---------VRVWKVIEHERLDG--FDVQDT--DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (519)
Q Consensus 308 ---------I~iWd~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 374 (519)
|++|++.++..... +..... ......+++++...++..... ......+.+++....
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~-----------~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG-----------TDPVNTVHVARVTNG 304 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT-----------TCSCCEEEEEEEETT
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc-----------CCCcceEEEEECCCC
Confidence 88999877653211 111111 122333333332222111100 001223444433211
Q ss_pred cccccceeEeeccCCCeeEEEEcCCC-eEEEEeCC----CcEEEEECCCC--eEEEEec-CCCcEEEEEEeeCCCCEEEE
Q 010037 375 RLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD----KTVRLWQVGID--RCLRVFS-HNNYVTSVAFNPVDDNYFIS 446 (519)
Q Consensus 375 ~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~D----g~V~lWdl~~~--~~~~~~~-h~~~V~~v~fsp~d~~~l~s 446 (519)
. .+....+..+...+.... +|++ .|+..+.+ +.|.+||+.++ .....+. +...+..+.|. ++.++++
T Consensus 305 ~--~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~ 379 (741)
T 1yr2_A 305 K--IGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFAS 379 (741)
T ss_dssp E--ECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEE
T ss_pred C--CcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEE
Confidence 0 011344455555555553 4777 67666653 45999999884 4445554 44456677776 4678888
Q ss_pred EeCCCeEEEEEcC-CCcEE-eecc-CCCceEEEEEeeCCCEEEEEe----cCCeEEEEECCCCeeeec
Q 010037 447 GSIDGKVRIWEVR-RCQVV-DYTD-IREIVSAVCYCPDGKGGIVGT----MTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 447 gs~Dg~V~iwd~~-~~~~~-~~~~-~~~~V~~v~~spdg~~l~sgs----~dg~v~iwdl~~~~l~~~ 507 (519)
...|+..+||.+. ++... .+.. ....+..++++|+++.|+... ..+.|++||+.+++...+
T Consensus 380 ~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 380 YIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 8889987777554 34433 3332 356788999999998666432 347899999998875444
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.03 E-value=2.8e-08 Score=98.36 Aligned_cols=226 Identities=8% Similarity=0.006 Sum_probs=145.8
Q ss_pred eecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceE
Q 010037 253 GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCL 332 (519)
Q Consensus 253 gs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~ 332 (519)
|+.++.|.++|........ ..+....-.........+.+. +++.+++...++.|.+||..+++.+..+.. ...+..+
T Consensus 13 g~~~~~l~~~d~~t~~~~~-~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i 89 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVEN-EVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYI 89 (328)
T ss_dssp TSCCBEEEEEETTTTEEEC-SHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEE
T ss_pred CCCCceEEEEECCCCEEhh-hhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEE
Confidence 3458999999987654321 111000000112346778874 455556666689999999999998777742 2333444
Q ss_pred EEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeecc-----CCCeeEEEEcCCCeEEEEe-
Q 010037 333 YFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH-----SSEVLDLSWSKNGFLLSSS- 406 (519)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~l~~sp~~~L~sgs- 406 (519)
.+.++. .++.... .+..+.+++.....+ ...+... ......|++ .++.|+.+.
T Consensus 90 ~~~~~g--~lyv~~~--------------~~~~v~~iD~~t~~~----~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~ 148 (328)
T 3dsm_A 90 HFLSDE--KAYVTQI--------------WDYRIFIINPKTYEI----TGYIECPDMDMESGSTEQMVQ-YGKYVYVNCW 148 (328)
T ss_dssp EEEETT--EEEEEEB--------------SCSEEEEEETTTTEE----EEEEECTTCCTTTCBCCCEEE-ETTEEEEEEC
T ss_pred EEeCCC--eEEEEEC--------------CCCeEEEEECCCCeE----EEEEEcCCccccCCCcceEEE-ECCEEEEEcC
Confidence 443332 2322221 234455555543322 1222211 124567777 455555554
Q ss_pred -CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCC----------CeEEEEEcCCCcEEeeccC--CCce
Q 010037 407 -ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSID----------GKVRIWEVRRCQVVDYTDI--REIV 473 (519)
Q Consensus 407 -~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~D----------g~V~iwd~~~~~~~~~~~~--~~~V 473 (519)
.++.|.+||+.+++.+..+........++++| ++++++++..+ +.|.++|..++++...... ....
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p 227 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTIGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWP 227 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEECSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCCCEEEEEECCCCeEEEEEEcCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCc
Confidence 48999999999999988887666678899999 88877776655 7899999999987743332 3468
Q ss_pred EEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 474 SAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 474 ~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
..++++|+++.|.++.. .|.+||+.++++.
T Consensus 228 ~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 228 SEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp EEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred eeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 99999999999888765 8999999988764
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.03 E-value=2.7e-08 Score=109.69 Aligned_cols=258 Identities=12% Similarity=0.001 Sum_probs=137.7
Q ss_pred ecCCCCeEEeeecCCe---EEEeeCCcc---ccccccccccc-eeecCCCCEEEEEEccCCCEEEEEeCC-----CcEEE
Q 010037 243 LKPGDHELTLGQRMRR---VRVHPVKKQ---SRELSSLYTGQ-EFLAHEGSILTMKFSLDGQYLASGGED-----GTVRV 310 (519)
Q Consensus 243 ~sp~g~~lasgs~dg~---I~vw~~~~~---~~~~~~~~~~~-~l~~H~~~I~~l~fspdg~~LaSgs~D-----g~I~i 310 (519)
..|+|++++....++. -.+|..... ......+.... .-.+|...+..++|||||++||.+..+ ..|++
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 3488988877654432 445543311 11111110000 112344578899999999999887654 46999
Q ss_pred EecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCC
Q 010037 311 WKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSE 390 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 390 (519)
||+.+++.... .........+.|+++ .. ++......... ............+..++..........+.....+...
T Consensus 194 ~dl~tg~~~~~-~~~~~~~~~~~wspD-~~-l~~~~~~~~~~-~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 194 VGVADGKPLAD-ELKWVKFSGLAWLGN-DA-LLYSRFAEPKE-GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp EETTTCCEEEE-EEEEEESCCCEESTT-SE-EEEEECCCC---------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EECCCCCCCCc-cCCCceeccEEEECC-CE-EEEEEecCccc-ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 99999886543 111111234455555 22 22222111100 0000000112234444433221111112222233446
Q ss_pred eeEEEEcCCC-eEEEEeCC-----CcEEEEECCCC--e-EEEEecCCCcEEEEEEeeCCCCEEEEEeC----CCeEEEEE
Q 010037 391 VLDLSWSKNG-FLLSSSAD-----KTVRLWQVGID--R-CLRVFSHNNYVTSVAFNPVDDNYFISGSI----DGKVRIWE 457 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs~D-----g~V~lWdl~~~--~-~~~~~~h~~~V~~v~fsp~d~~~l~sgs~----Dg~V~iwd 457 (519)
+..+.|+|+| +|+..+.+ ..|++||+.++ + ......+...+.... .| ++..|+..+. ++.|.+||
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EE-ETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-ec-cCCEEEEEECCCCCCCEEEEEe
Confidence 8899999999 77766644 38999999887 4 334444554555553 47 7777777665 35699999
Q ss_pred cCCC--cEEee-ccCCCceEEEEEeeCCCEEEEEecCCeEEEE--ECCCCeeeec
Q 010037 458 VRRC--QVVDY-TDIREIVSAVCYCPDGKGGIVGTMTGNCRFY--DIKGMQIFDL 507 (519)
Q Consensus 458 ~~~~--~~~~~-~~~~~~V~~v~~spdg~~l~sgs~dg~v~iw--dl~~~~l~~~ 507 (519)
+.++ +...+ ..+...+..++|. ++.++++...+|..+|| ++.++.+..+
T Consensus 348 ~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 348 LSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp CSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred CCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence 9874 33333 3344456677887 66677888889886666 4444444333
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.03 E-value=1.4e-08 Score=97.96 Aligned_cols=187 Identities=10% Similarity=0.065 Sum_probs=132.5
Q ss_pred CCCEEEEEeCCCcEEEEecccCeeeceeeccC-CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcc
Q 010037 295 DGQYLASGGEDGTVRVWKVIEHERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV 373 (519)
Q Consensus 295 dg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 373 (519)
.+++|++++.|+.|.+||..+++.+..+..+. .....+.+.++.. ++. . .+..+..+++.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~--ilv-s---------------~~~~V~~~d~~- 64 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE--ILF-S---------------YSKGAKMITRD- 64 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC--EEE-E---------------CBSEEEEECTT-
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC--EEE-e---------------CCCCEEEECCC-
Confidence 45789999999999999999999988887654 2445555554431 221 1 12234444431
Q ss_pred ccccccceeEeecc-CCCeeEEEEcCCC-eEEEEeC-CCcEEEEECCCCeEEEEecC-------CCcEEEEEEeeCCCCE
Q 010037 374 FRLLEKPLHEFQGH-SSEVLDLSWSKNG-FLLSSSA-DKTVRLWQVGIDRCLRVFSH-------NNYVTSVAFNPVDDNY 443 (519)
Q Consensus 374 ~~~~~~~~~~~~~h-~~~V~~l~~sp~~-~L~sgs~-Dg~V~lWdl~~~~~~~~~~h-------~~~V~~v~fsp~d~~~ 443 (519)
++.+..+..+ ...+.++.+.++| .+++.+. ++.|..+|. .++.+..+.. ......+++.+ ++++
T Consensus 65 ----G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~ 138 (276)
T 3no2_A 65 ----GRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNY 138 (276)
T ss_dssp ----SCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCE
T ss_pred ----CCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCE
Confidence 2334445543 3468889999999 7777776 777888875 6777766641 12345567888 8999
Q ss_pred EEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCee-eec
Q 010037 444 FISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI-FDL 507 (519)
Q Consensus 444 l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l-~~~ 507 (519)
+++...++.|..||.. ++.+........+.++...++|+.++++..++.|..+|..++++ +++
T Consensus 139 lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 139 LVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred EEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 9999999999999998 88774444345567788899999999988888999999996654 444
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.99 E-value=2.4e-08 Score=101.97 Aligned_cols=246 Identities=9% Similarity=-0.028 Sum_probs=147.4
Q ss_pred ceeecCCCCeEEeee----------cCCeEEEeeCCcccccccccccc--ceeecCCCCEEEEEEccCCCEEEEEeC--C
Q 010037 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTG--QEFLAHEGSILTMKFSLDGQYLASGGE--D 305 (519)
Q Consensus 240 ~~~~sp~g~~lasgs----------~dg~I~vw~~~~~~~~~~~~~~~--~~l~~H~~~I~~l~fspdg~~LaSgs~--D 305 (519)
.++++||+++++++. .++.|.++|.......- .+... ..+. .......+.|+|||++|+.+.. +
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~-~I~v~g~~r~~-~g~~P~~~~~spDGk~lyV~n~~~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA-DIELPDAPRFL-VGTYQWMNALTPDNKNLLFYQFSPA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE-EEEETTCCCCC-BSCCGGGSEECTTSSEEEEEECSSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE-EEECCCccccc-cCCCcceEEEcCCCCEEEEEecCCC
Confidence 479999999998876 46789999987544321 11000 0000 0122346799999999998874 5
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
+.|.+.|+.+++.+..+..... ....+.....++.+.. .+....... ....... ... ..+ .
T Consensus 200 ~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~-dG~~~~V~~--~~~~v~~-~~~-~~~----------~ 260 (426)
T 3c75_H 200 PAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCR-DGSLARVDF--ADGETKV-TNT-EVF----------H 260 (426)
T ss_dssp CEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEET-TSSEEEEEC--CTTCCEE-EEC-CCC----------S
T ss_pred CeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcC-CCCEEEEEC--CCCcEEE-Eee-eee----------c
Confidence 7899999999998888775321 1222221111111111 111111110 0000000 000 011 1
Q ss_pred ccCCC-eeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEE--Eec-----------CCCcEEEEEEeeCCCCEEEEEeC-
Q 010037 386 GHSSE-VLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLR--VFS-----------HNNYVTSVAFNPVDDNYFISGSI- 449 (519)
Q Consensus 386 ~h~~~-V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~--~~~-----------h~~~V~~v~fsp~d~~~l~sgs~- 449 (519)
....+ ...+.+.+++ .++..+..+.|.+.|+....... .+. .......++++| ++..+++...
T Consensus 261 v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~-dg~rlyVa~~~ 339 (426)
T 3c75_H 261 TEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR-QSDRIYLLVDQ 339 (426)
T ss_dssp CTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG-GGTEEEEEEEE
T ss_pred cCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC-CCCEEEEEecc
Confidence 11111 1235678887 66666778899999987654321 111 011122378999 7666555432
Q ss_pred ---------CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCC-EEEEEe-cCCeEEEEECCCCeeeec
Q 010037 450 ---------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK-GGIVGT-MTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 450 ---------Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~-~l~sgs-~dg~v~iwdl~~~~l~~~ 507 (519)
.+.|.+.|+.+.+++...........++|+|||+ ++++.. .++.|.++|+.+++++..
T Consensus 340 ~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 340 RDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp CCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred cccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 3579999999999997665556789999999999 888887 489999999999987643
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.97 E-value=3.2e-08 Score=108.35 Aligned_cols=200 Identities=10% Similarity=0.100 Sum_probs=126.8
Q ss_pred ccceeecCCCCeEEe-----eecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCc-----
Q 010037 238 HGSATLKPGDHELTL-----GQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGT----- 307 (519)
Q Consensus 238 ~~~~~~sp~g~~las-----gs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~----- 307 (519)
+..++|+|||++||. |+....|+|||+..+..... .+... ....++|+ ||+.|+.++.+..
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~------~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET------PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE------EEEEE--ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc------ccCCc--eeccEEEe-CCCEEEEEEecCcccccc
Confidence 334689999999984 44456899999986542111 11111 12467899 9999998887743
Q ss_pred --------EEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccc
Q 010037 308 --------VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEK 379 (519)
Q Consensus 308 --------I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 379 (519)
|++|++.++.... .
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~----------------------------------------------------------~ 223 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDD----------------------------------------------------------R 223 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGC----------------------------------------------------------E
T ss_pred cccCCCcEEEEEECCCCcccc----------------------------------------------------------e
Confidence 6666665443100 0
Q ss_pred ceeEeec-cCCCeeEEEEcCCC-eE-EEEeC---CCcEEEEECCCC--eEEEEecCCCcEEEEEEeeCCCCEEEEEeCC-
Q 010037 380 PLHEFQG-HSSEVLDLSWSKNG-FL-LSSSA---DKTVRLWQVGID--RCLRVFSHNNYVTSVAFNPVDDNYFISGSID- 450 (519)
Q Consensus 380 ~~~~~~~-h~~~V~~l~~sp~~-~L-~sgs~---Dg~V~lWdl~~~--~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~D- 450 (519)
.+..... |...+..+.|+|+| +| ++.+. ...|+++|+.++ .......+....... |++.++.+++....+
T Consensus 224 ~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~ 302 (693)
T 3iuj_A 224 LVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDA 302 (693)
T ss_dssp EEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTC
T ss_pred EEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCC
Confidence 1111222 44456788999999 55 44332 358999999876 444444455555555 566244455555443
Q ss_pred --CeEEEEEcCCCcE---EeeccCCCceEEEEEeeCCCEEEEEecCC---eEEEEECCCCeeeec
Q 010037 451 --GKVRIWEVRRCQV---VDYTDIREIVSAVCYCPDGKGGIVGTMTG---NCRFYDIKGMQIFDL 507 (519)
Q Consensus 451 --g~V~iwd~~~~~~---~~~~~~~~~V~~v~~spdg~~l~sgs~dg---~v~iwdl~~~~l~~~ 507 (519)
+.|.++|+.++.. ..+..+...+. .|+++++.|+....++ .|++|++.++....+
T Consensus 303 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 303 PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREV 365 (693)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEe
Confidence 6899999988654 34555655555 8999999888766544 689999987765444
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.94 E-value=1.5e-06 Score=85.75 Aligned_cols=221 Identities=8% Similarity=0.022 Sum_probs=132.6
Q ss_pred eeecCCC-CeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeee
Q 010037 241 ATLKPGD-HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERL 319 (519)
Q Consensus 241 ~~~sp~g-~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~ 319 (519)
.+|+|++ .+++++...+.|.+|+....... .+ .+...|.++.|+++|+++++. .+ .|.+||..+++..
T Consensus 54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~--------~~-~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASGRKT--------VH-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT 122 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEEE--------EE-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE
T ss_pred CeEeCCCCEEEEEECCCCEEEEEECCCCcEE--------EE-ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEE
Confidence 5789974 55666777899999998754321 11 134579999999999877754 44 4999998877643
Q ss_pred ceeeccCC----CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEE
Q 010037 320 DGFDVQDT----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLS 395 (519)
Q Consensus 320 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 395 (519)
........ .+..+.+.+ ...++........ ......+..++ . + .+..+..+......++
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~--~G~l~v~~~~~~~--------~~~~~~l~~~~-~-----g-~~~~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHP--SGALWIGTMGRKA--------ETGAGSIYHVA-K-----G-KVTKLFADISIPNSIC 185 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECT--TSCEEEEEEETTC--------CTTCEEEEEEE-T-----T-EEEEEEEEESSEEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECC--CCCEEEEeCCCcC--------CCCceEEEEEe-C-----C-cEEEeeCCCcccCCeE
Confidence 22221111 111222222 2223222111000 00112233332 1 0 1112222334567899
Q ss_pred EcCCC-eE-EEEeCCCcEEEEECC--CC-e-----EEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE
Q 010037 396 WSKNG-FL-LSSSADKTVRLWQVG--ID-R-----CLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (519)
Q Consensus 396 ~sp~~-~L-~sgs~Dg~V~lWdl~--~~-~-----~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~ 464 (519)
|+|++ .| ++.+.++.|.+|++. ++ . ....+. ....+..+++.+ +++++++...++.|.+||. +++.+
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~ 263 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHI 263 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECT-TCCEE
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEE
Confidence 99999 55 444567899999986 55 2 222232 345678999999 8888888777789999998 45554
Q ss_pred -eeccCCCceEEEEEe-eCCCEEEEEecC
Q 010037 465 -DYTDIREIVSAVCYC-PDGKGGIVGTMT 491 (519)
Q Consensus 465 -~~~~~~~~V~~v~~s-pdg~~l~sgs~d 491 (519)
.+..+...+++++|. |+++.|++++..
T Consensus 264 ~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 264 ARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 444455579999998 898877666544
No 209
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.90 E-value=1e-07 Score=90.57 Aligned_cols=197 Identities=12% Similarity=-0.029 Sum_probs=125.0
Q ss_pred CEEEEEEccCCCEEE-EEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCe
Q 010037 286 SILTMKFSLDGQYLA-SGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (519)
Q Consensus 286 ~I~~l~fspdg~~La-Sgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 364 (519)
...+++++++|++++ +...++.|.+|+..+.............+..+.+.++. .++.... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g--~l~v~~~---------------~~ 87 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG--TVYVTDF---------------NN 87 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTC--CEEEEET---------------TT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCC--CEEEEcC---------------CC
Confidence 678999999999777 54778899999976554321111111233344443322 1222211 23
Q ss_pred eEEEeCCccccccccceeEee-ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCC
Q 010037 365 TCVVLPPKVFRLLEKPLHEFQ-GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDD 441 (519)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~ 441 (519)
.+..++.... ....+. .....+.++++.+++ .+++...++.|.+|+..+....... .....+.+|+++| ++
T Consensus 88 ~i~~~d~~~~-----~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g 161 (270)
T 1rwi_B 88 RVVTLAAGSN-----NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SG 161 (270)
T ss_dssp EEEEECTTCS-----CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TC
T ss_pred EEEEEeCCCc-----eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CC
Confidence 3444443321 111121 223568899999998 6666667889999987665443222 2334678999999 88
Q ss_pred CEEEEEeCCCeEEEEEcCCCcEEeec-cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 442 NYFISGSIDGKVRIWEVRRCQVVDYT-DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 442 ~~l~sgs~Dg~V~iwd~~~~~~~~~~-~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
+++++...++.|.+||.......... .....+..++++++|.++++...++.|.+|+..+....
T Consensus 162 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 162 NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence 88888777889999999887665432 23367899999999977777777889999999876543
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.90 E-value=1.4e-06 Score=83.79 Aligned_cols=228 Identities=5% Similarity=0.007 Sum_probs=139.6
Q ss_pred cceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCee
Q 010037 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (519)
Q Consensus 239 ~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~ 318 (519)
..+++.+++.+.++...++.|.+++.. .... .. .+......+.++++.++|+++++...++.|..|+.. ++.
T Consensus 65 ~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~--~~----~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 65 MCLIVSSLGDIWFTENGANKIGKLSKK-GGFT--EY----PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EE----ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred eeEEECCCCCEEEEecCCCeEEEECCC-CCeE--Ee----cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 357888999888777778899999876 3221 11 112234578999999999988877778899999986 443
Q ss_pred eceeecc--CCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEE
Q 010037 319 LDGFDVQ--DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (519)
Q Consensus 319 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 396 (519)
. .+... ...+..+.+.+ ...++..... ...+..++.. .... ......+...+.++++
T Consensus 137 ~-~~~~~~~~~~~~~i~~d~--~g~l~v~~~~--------------~~~i~~~~~~-g~~~---~~~~~~~~~~~~~i~~ 195 (300)
T 2qc5_A 137 Y-EYDLPNKGSYPAFITLGS--DNALWFTENQ--------------NNSIGRITNT-GKLE---EYPLPTNAAAPVGITS 195 (300)
T ss_dssp E-EEECSSTTCCEEEEEECT--TSSEEEEETT--------------TTEEEEECTT-CCEE---EEECSSTTCCEEEEEE
T ss_pred E-EccCCCCCCCceeEEECC--CCCEEEEecC--------------CCeEEEECCC-CcEE---EeeCCCCCCCcceEEE
Confidence 3 22222 11222222222 2223322211 2223333331 0000 0111234456889999
Q ss_pred cCCC-eEEEEeCCCcEEEEECCCCeEEEE-ec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee--ccCCC
Q 010037 397 SKNG-FLLSSSADKTVRLWQVGIDRCLRV-FS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY--TDIRE 471 (519)
Q Consensus 397 sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~-~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~--~~~~~ 471 (519)
.+++ .+++....+.|.+||. +++.... +. +...+.+|++++ +++++++...++.|..||. +++...+ .....
T Consensus 196 d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 272 (300)
T 2qc5_A 196 GNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRITN-DNTIQEYQLQTENA 272 (300)
T ss_dssp CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT-TSCEEEEECCSTTC
T ss_pred CCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECC-CCCEEEeccCCCeEEEECC-CCcEEEEECCccCC
Confidence 9988 4444455678999998 5544433 22 456789999999 7887777767789999998 4555433 22345
Q ss_pred ceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 472 ~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
.+.++++.++|+++++.. . .|..+|..
T Consensus 273 ~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 273 EPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred ccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 688999999998555544 4 77777653
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.88 E-value=2e-07 Score=90.96 Aligned_cols=234 Identities=9% Similarity=-0.029 Sum_probs=134.8
Q ss_pred ceeecCCCC-eEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCee
Q 010037 240 SATLKPGDH-ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHER 318 (519)
Q Consensus 240 ~~~~sp~g~-~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~ 318 (519)
..+|+|+++ +++++..++.|..|+... .. ..+..+...+..++++++|+++++...++.|.+|+.. ++.
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~~g-~~--------~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWREDG-TV--------DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEETTS-CE--------EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeCCC-CE--------EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 368999998 667777889999998642 21 1244466778999999999976665566789999975 442
Q ss_pred eceeeccC----CCCceEEEeecCCCCeEEeeccCCce---eeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCe
Q 010037 319 LDGFDVQD----TDPSCLYFTINHLSQLIPIDVDKEKI---DKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEV 391 (519)
Q Consensus 319 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 391 (519)
........ ..+..+.+.+. ..++..+...... .............+..++..... +..+. +....
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~d--G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-----~~~~~-~~~~p 190 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARD--GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-----LQRMA-DLDHP 190 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTT--SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-----CEEEE-EESSE
T ss_pred EEEEeccCCCccCCCCCEEECCC--CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-----EEEEe-cCCCC
Confidence 21111100 11222333322 2222211000000 00000000112345555543211 11122 33456
Q ss_pred eEEEEcCCC-eEEEEeCC------CcEEEEECCCCeEE--EEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC
Q 010037 392 LDLSWSKNG-FLLSSSAD------KTVRLWQVGIDRCL--RVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (519)
Q Consensus 392 ~~l~~sp~~-~L~sgs~D------g~V~lWdl~~~~~~--~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~ 460 (519)
..++|+|++ .|+.+... +.|.+|++..+... ..+. .......+++++ ++++.++. .+ .|.+|+..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~~-~~-gv~~~~~~- 266 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSSS-GT-GVCVFDSD- 266 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEECC-SS-EEEEECTT-
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEec-CC-cEEEECCC-
Confidence 789999999 67666554 78999998765411 1221 234456789999 88855544 44 59999985
Q ss_pred CcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEE
Q 010037 461 CQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCR 495 (519)
Q Consensus 461 ~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~ 495 (519)
++.+........+.+++|.|+++.|++++.++..+
T Consensus 267 g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 267 GQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp SCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEE
T ss_pred CCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEE
Confidence 55543333334688999999999888888764433
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=7.1e-08 Score=96.03 Aligned_cols=210 Identities=10% Similarity=0.083 Sum_probs=131.5
Q ss_pred cccceeecCCCCeEEeeec--CCeEEEeeCCcccccccccccc-ceeecCCCCEEEEEEccCCCEEEEEeC-----CCcE
Q 010037 237 RHGSATLKPGDHELTLGQR--MRRVRVHPVKKQSRELSSLYTG-QEFLAHEGSILTMKFSLDGQYLASGGE-----DGTV 308 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~--dg~I~vw~~~~~~~~~~~~~~~-~~l~~H~~~I~~l~fspdg~~LaSgs~-----Dg~I 308 (519)
....++++|+|+.+++... ++.++||.+.... +..+... .....|-..+..|+++++|+++++-.. ++.|
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~--~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG--LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE--EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCC--eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 3445899999999888542 3435566554221 1111100 112346678999999999886665433 5789
Q ss_pred EEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC
Q 010037 309 RVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS 388 (519)
Q Consensus 309 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~ 388 (519)
.+||+.+++.+..+..+... ..+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~--------------------------------------------------------~~~~ 119 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPI--------------------------------------------------------TLSN 119 (343)
T ss_dssp EEEETTTTEEEEEEECCTTT--------------------------------------------------------SCTT
T ss_pred EEEECCCCeEEEEEECChhh--------------------------------------------------------cccc
Confidence 99999888755444321100 0123
Q ss_pred CCeeEEEEcCC-Ce-EEEEe---CCCcEEEEECCCCeEEEEecC------------------------------CCcEEE
Q 010037 389 SEVLDLSWSKN-GF-LLSSS---ADKTVRLWQVGIDRCLRVFSH------------------------------NNYVTS 433 (519)
Q Consensus 389 ~~V~~l~~sp~-~~-L~sgs---~Dg~V~lWdl~~~~~~~~~~h------------------------------~~~V~~ 433 (519)
..+..++++++ +. +++.. .++.|.+||+.+++..+.+.. ...++.
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 34577888875 43 44444 577888899887776665421 023688
Q ss_pred EEEeeCCCCEEEEEeCCC-eEEEEEcC---CCcE--------EeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 434 VAFNPVDDNYFISGSIDG-KVRIWEVR---RCQV--------VDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 434 v~fsp~d~~~l~sgs~Dg-~V~iwd~~---~~~~--------~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
|+|+| +++.|+.+..++ .|..++.. .+.. +...++......++++++|+++++...++.|.+||..+
T Consensus 200 ia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~ 278 (343)
T 2qe8_A 200 IVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD 278 (343)
T ss_dssp EEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT
T ss_pred eEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC
Confidence 99999 888888887766 55554432 1110 11112333566799999999988888899999999955
Q ss_pred Ceee
Q 010037 502 MQIF 505 (519)
Q Consensus 502 ~~l~ 505 (519)
+++.
T Consensus 279 G~~~ 282 (343)
T 2qe8_A 279 RAYK 282 (343)
T ss_dssp TEEE
T ss_pred CCEE
Confidence 6543
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.85 E-value=1.9e-07 Score=93.74 Aligned_cols=231 Identities=12% Similarity=0.027 Sum_probs=138.1
Q ss_pred eeecCCCCeEEeee----------cCCeEEEeeCCccccccccccccceeecC-------CCCEEEEEEccCCCEEEEEe
Q 010037 241 ATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTGQEFLAH-------EGSILTMKFSLDGQYLASGG 303 (519)
Q Consensus 241 ~~~sp~g~~lasgs----------~dg~I~vw~~~~~~~~~~~~~~~~~l~~H-------~~~I~~l~fspdg~~LaSgs 303 (519)
++++|+|++++++. .++.|.+||....... .++.-. ...-..+.|+|||++|+.+.
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~-------~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan 155 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT-------ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 155 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE-------EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE-------EEEECCCccccccCCCCceEEEcCCCCEEEEEE
Confidence 79999999998765 3678999998754421 112110 11345689999999988886
Q ss_pred C--CCcEEEEecccCeeeceeeccCCC-----CceEEEeecCCCCeEEeeccC-Cceeee--ee----------------
Q 010037 304 E--DGTVRVWKVIEHERLDGFDVQDTD-----PSCLYFTINHLSQLIPIDVDK-EKIDKT--KS---------------- 357 (519)
Q Consensus 304 ~--Dg~I~iWd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~---------------- 357 (519)
. ++.|.++|+.+++.+..+...... ....++.....+.++.+.... .+.... ..
T Consensus 156 ~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~ 235 (386)
T 3sjl_D 156 FSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ 235 (386)
T ss_dssp CSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEET
T ss_pred cCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEc
Confidence 4 689999999999988888653210 000001111122233233222 111000 00
Q ss_pred -----eccCCCeeEEEeCCccccccccceeEee---------c-cCCCeeEEEEcCCC-eEEEEeC----------CCcE
Q 010037 358 -----LRKSSDLTCVVLPPKVFRLLEKPLHEFQ---------G-HSSEVLDLSWSKNG-FLLSSSA----------DKTV 411 (519)
Q Consensus 358 -----~~~s~~~~~~~~~~~~~~~~~~~~~~~~---------~-h~~~V~~l~~sp~~-~L~sgs~----------Dg~V 411 (519)
+..+..+.+.+++...... +.+..+. + ....+..+++++++ +|+.... ...|
T Consensus 236 ~dG~~~~vs~~g~V~v~d~~~~~~--~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 236 KAGRLVWPTYTGKIHQIDLSSGDA--KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp TTTEEEEEBTTSEEEEEECTTSSC--EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred CCCcEEEEeCCCEEEEEECCCCcc--eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 0011112222222211000 0011110 0 12234457778887 5555432 2579
Q ss_pred EEEECCCCeEEEEecCCCcEEEEEEeeCCCC-EEEEEe-CCCeEEEEEcCCCcEEeeccCCCceEEEEEeeC
Q 010037 412 RLWQVGIDRCLRVFSHNNYVTSVAFNPVDDN-YFISGS-IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPD 481 (519)
Q Consensus 412 ~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~-~l~sgs-~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spd 481 (519)
.+.|+.+++.++.+.-...++.|+++| +++ +|++.. .++.|.++|..+++++.........+.+.+++|
T Consensus 314 ~viD~~t~kv~~~i~vg~~~~~lavs~-D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 314 VVLDAKTGERLAKFEMGHEIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEETTTCCEEEEEEEEEEECEEEECS-SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EEEECCCCeEEEEEECCCCcceEEECC-CCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 999999999999998667899999999 775 666654 589999999999999976666666677777776
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.81 E-value=9.8e-07 Score=90.08 Aligned_cols=205 Identities=13% Similarity=0.032 Sum_probs=126.4
Q ss_pred CCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCe
Q 010037 285 GSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (519)
Q Consensus 285 ~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 364 (519)
.....|+|+++++++++...++.|++||..++......... .... +.+.+... .++....... .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~-~l~~~d~~~~-------------~ 194 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQ-RVYSIGWEGT-------------H 194 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSS-EEEEEBSSTT-------------C
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCC-cEEEEecCCC-------------c
Confidence 45789999999998888777899999999887765443331 1122 33333221 1222221111 0
Q ss_pred eEEEeCCccccccccceeEeec-cCCCeeEEEEcC-CCeEEEEeCCCcEEEEECCCCeEEEE----ec-CCCcE--EEEE
Q 010037 365 TCVVLPPKVFRLLEKPLHEFQG-HSSEVLDLSWSK-NGFLLSSSADKTVRLWQVGIDRCLRV----FS-HNNYV--TSVA 435 (519)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~sp-~~~L~sgs~Dg~V~lWdl~~~~~~~~----~~-h~~~V--~~v~ 435 (519)
.+..++...... ...+..+.. +...+.+++++| ++.|+.+..++.|+.||..++..... .. +...- ..++
T Consensus 195 ~I~~~d~~~~~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia 273 (409)
T 3hrp_A 195 TVYVYMKASGWA-PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLI 273 (409)
T ss_dssp EEEEEEGGGTTC-EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEE
T ss_pred eEEEEEcCCCce-eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEE
Confidence 222222211000 000111112 446678999999 56666677788999999987764332 11 11112 3999
Q ss_pred EeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccC---------------CCceEEEEEeeCCCEEEEEe-cCCeEEEEEC
Q 010037 436 FNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI---------------REIVSAVCYCPDGKGGIVGT-MTGNCRFYDI 499 (519)
Q Consensus 436 fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~---------------~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl 499 (519)
|+|.++.++++-..++.|+.|+.... ...+.+. -.....++++|+|+++++-. .++.|+.|++
T Consensus 274 ~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 274 YYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred EeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 99944666677777889999998754 3322222 13478999999999777777 7889999998
Q ss_pred CCCeeeec
Q 010037 500 KGMQIFDL 507 (519)
Q Consensus 500 ~~~~l~~~ 507 (519)
.++++..+
T Consensus 353 ~~G~v~~~ 360 (409)
T 3hrp_A 353 LDGYVSTV 360 (409)
T ss_dssp TTTEEEEE
T ss_pred CCCEEEEE
Confidence 88876543
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.80 E-value=7.5e-10 Score=111.75 Aligned_cols=185 Identities=10% Similarity=0.079 Sum_probs=98.6
Q ss_pred CCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeecc
Q 010037 246 GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQ 325 (519)
Q Consensus 246 ~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~ 325 (519)
++..+++++.||.|+.||...++..-. +.. +.+.+..+..++..+++++.||.|+.||..+++.+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~-------~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWT-------LKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEE-------EEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEE-------ecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 577889999999999999876554211 122 34445555667777888889999999999887753322110
Q ss_pred CCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEE
Q 010037 326 DTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSS 405 (519)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sg 405 (519)
.. ... ...++ ...++.++++
T Consensus 79 ~~---------------------------------------------------~~~-----~~sp~----~~~~~~v~~g 98 (369)
T 2hz6_A 79 IP---------------------------------------------------ELV-----QASPC----RSSDGILYMG 98 (369)
T ss_dssp HH---------------------------------------------------HHH-----TTCSC----C-----CCCC
T ss_pred Cc---------------------------------------------------ccc-----ccCce----EecCCEEEEE
Confidence 00 000 01111 1123467778
Q ss_pred eCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCC---
Q 010037 406 SADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDG--- 482 (519)
Q Consensus 406 s~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg--- 482 (519)
+.|+.|+.||..+++.+..+.... .+.++| ++..+++++.|+.|+.||.++++.+...... .....++.+++
T Consensus 99 ~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~~~~~~~~~~~~~~ 173 (369)
T 2hz6_A 99 KKQDIWYVIDLLTGEKQQTLSSAF---ADSLSP-STSLLYLGRTEYTITMYDTKTRELRWNATYF-DYAASLPEDDVDYK 173 (369)
T ss_dssp EEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE-EECCBCCCCCTTCC
T ss_pred eCCCEEEEEECCCCcEEEEecCCC---cccccc-cCCEEEEEecCCEEEEEECCCCCEEEeEecc-cccCccccCCcccc
Confidence 889999999999999887776333 245677 7888999999999999999998866221111 11223333432
Q ss_pred CEEEEEecCCeEEEEECCCCee
Q 010037 483 KGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 483 ~~l~sgs~dg~v~iwdl~~~~l 504 (519)
..+++++.+|.|+.||..++++
T Consensus 174 ~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCEEEEETSCEEEEECTTTCCE
T ss_pred ceEEEECCCCEEEEEECCCCcE
Confidence 4677889999999999988765
No 216
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.78 E-value=3.7e-07 Score=88.71 Aligned_cols=203 Identities=10% Similarity=0.108 Sum_probs=120.0
Q ss_pred cCCCCEEEEEEccCCCEEEE-------EeCCCcEEEEecccCeeeceeec-----cCCCCceEEEeecCCCCeEEeeccC
Q 010037 282 AHEGSILTMKFSLDGQYLAS-------GGEDGTVRVWKVIEHERLDGFDV-----QDTDPSCLYFTINHLSQLIPIDVDK 349 (519)
Q Consensus 282 ~H~~~I~~l~fspdg~~LaS-------gs~Dg~I~iWd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (519)
..-....+++|+++|+++++ +..++.|.+|+..+++... +.. ....+..+.+.+.. ..++....
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-g~l~v~~~-- 90 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDA-NQLFVADM-- 90 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSS-SEEEEEET--
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCC-CcEEEEEC--
Confidence 33445689999999988877 5678899999987776432 211 11122222222210 11222111
Q ss_pred CceeeeeeeccCCCeeEEEeCCccccccccceeEe-eccCCCeeEEEEcCCC-eEEEEeCC---------------CcEE
Q 010037 350 EKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSKNG-FLLSSSAD---------------KTVR 412 (519)
Q Consensus 350 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~-~L~sgs~D---------------g~V~ 412 (519)
. ..+..++.. ........... ..+...+.++++.++| ++++...+ +.|.
T Consensus 91 ------------~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~ 156 (314)
T 1pjx_A 91 ------------R-LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIY 156 (314)
T ss_dssp ------------T-TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEE
T ss_pred ------------C-CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEE
Confidence 1 123333332 11100000000 0122458899999999 44444443 4677
Q ss_pred EEECCCCeEEEEecCCCcEEEEEEe----eCCCCEE-EEEeCCCeEEEEEcC-CCcEE------eeccCC-CceEEEEEe
Q 010037 413 LWQVGIDRCLRVFSHNNYVTSVAFN----PVDDNYF-ISGSIDGKVRIWEVR-RCQVV------DYTDIR-EIVSAVCYC 479 (519)
Q Consensus 413 lWdl~~~~~~~~~~h~~~V~~v~fs----p~d~~~l-~sgs~Dg~V~iwd~~-~~~~~------~~~~~~-~~V~~v~~s 479 (519)
.|+.. ++......+......++|+ | +++.+ ++...++.|.+||+. +++.. ....+. ..+..++++
T Consensus 157 ~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 157 CFTTD-GQMIQVDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp EECTT-SCEEEEEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred EECCC-CCEEEeccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 77766 5555544455567899999 9 77655 444568899999986 44421 122222 567889999
Q ss_pred eCCCEEEEEecCCeEEEEECCCCee
Q 010037 480 PDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 480 pdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
++|+++++...++.|.+||..++++
T Consensus 235 ~~G~l~v~~~~~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 235 EDNNLLVANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSC
T ss_pred CCCCEEEEEcCCCEEEEEcCCCCcE
Confidence 9999888877889999999986554
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.73 E-value=7.3e-07 Score=97.47 Aligned_cols=200 Identities=13% Similarity=0.132 Sum_probs=126.8
Q ss_pred cceeecCCCCeEEeeecCC-------------eEEEeeCCccccccccccccceeec-CCCCEEEEEEccCCCEEEEEeC
Q 010037 239 GSATLKPGDHELTLGQRMR-------------RVRVHPVKKQSRELSSLYTGQEFLA-HEGSILTMKFSLDGQYLASGGE 304 (519)
Q Consensus 239 ~~~~~sp~g~~lasgs~dg-------------~I~vw~~~~~~~~~~~~~~~~~l~~-H~~~I~~l~fspdg~~LaSgs~ 304 (519)
..++|+ |++.|+.+..+. .|++|++.....+-..++ .... |...+..+.|+|||++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~---~~~~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF---GAIPAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE---SCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE---ecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence 468999 999999887774 489998875443211111 1123 4556788999999998865432
Q ss_pred ----CCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccc
Q 010037 305 ----DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP 380 (519)
Q Consensus 305 ----Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 380 (519)
+..|.+||+.++.. .
T Consensus 254 ~~~~~~~i~~~d~~~~~~-------------------------------------------------------------~ 272 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENA-------------------------------------------------------------P 272 (693)
T ss_dssp SSSSCCEEEEEETTSTTC-------------------------------------------------------------C
T ss_pred cCCCCcEEEEEECCCCCC-------------------------------------------------------------c
Confidence 24788888765421 0
Q ss_pred eeEeeccCCCeeEEEEcCCC-e-EEEEeCC---CcEEEEECCCCeE---EEEecCCCcEEEEEEeeCCCCEEEEEeC-CC
Q 010037 381 LHEFQGHSSEVLDLSWSKNG-F-LLSSSAD---KTVRLWQVGIDRC---LRVFSHNNYVTSVAFNPVDDNYFISGSI-DG 451 (519)
Q Consensus 381 ~~~~~~h~~~V~~l~~sp~~-~-L~sgs~D---g~V~lWdl~~~~~---~~~~~h~~~V~~v~fsp~d~~~l~sgs~-Dg 451 (519)
...+..+....... |++++ . ++.+..+ +.|.++|+.++.. .....|...+. .|+| ++++|+.... ++
T Consensus 273 ~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~-~g~~lv~~~~~~g 348 (693)
T 3iuj_A 273 LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS-GSGYLFAEYMVDA 348 (693)
T ss_dssp CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE-ETTEEEEEEEETT
T ss_pred eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE-ECCEEEEEEEECC
Confidence 11122233333333 44554 3 3444333 6799999988654 33445665555 8999 6777766554 44
Q ss_pred --eEEEEEcCCCcEEeec-cCCCceEEEEEeeCCCEEEEEecC----CeEEEEECCCCeeeec
Q 010037 452 --KVRIWEVRRCQVVDYT-DIREIVSAVCYCPDGKGGIVGTMT----GNCRFYDIKGMQIFDL 507 (519)
Q Consensus 452 --~V~iwd~~~~~~~~~~-~~~~~V~~v~~spdg~~l~sgs~d----g~v~iwdl~~~~l~~~ 507 (519)
.|++||+..+....+. .....+..+.++|+++.|+....+ +.++.||+.+++...+
T Consensus 349 ~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l 411 (693)
T 3iuj_A 349 TARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLY 411 (693)
T ss_dssp EEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEE
T ss_pred eeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEE
Confidence 6899999866544432 234567788888999877776555 8899999988765443
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.69 E-value=1.4e-06 Score=87.41 Aligned_cols=233 Identities=10% Similarity=-0.061 Sum_probs=132.8
Q ss_pred eEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEecccCeeeceeeccC-
Q 010037 258 RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------EDGTVRVWKVIEHERLDGFDVQD- 326 (519)
Q Consensus 258 ~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs----------~Dg~I~iWd~~~~~~~~~~~~~~- 326 (519)
+|.|.|....+.. .++..-..+ .+.++||+++|+.+. .++.|.+||+.+++....+..+.
T Consensus 47 ~vsvID~~t~~v~-------~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVTL-------GHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEEE-------EEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECCCCeEE-------EEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence 7889987754432 233333345 799999999888886 36899999999999998887651
Q ss_pred ------CCCceEEEeecCCCCeEEeecc-CCceee---------eee---------------eccCCCeeEEEeCCcc--
Q 010037 327 ------TDPSCLYFTINHLSQLIPIDVD-KEKIDK---------TKS---------------LRKSSDLTCVVLPPKV-- 373 (519)
Q Consensus 327 ------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~---------------~~~s~~~~~~~~~~~~-- 373 (519)
..+..+.++++....... +.. ...+.. ... +..+.++.+...+...
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVa-n~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFF-LFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEE-ECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred cccccCCCcceEEEcCCCCEEEEE-ccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECcccc
Confidence 345566666655432222 111 110000 000 0011111111111111
Q ss_pred ---ccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCC--eEEEEecC-----------CCcEEEEEE
Q 010037 374 ---FRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGID--RCLRVFSH-----------NNYVTSVAF 436 (519)
Q Consensus 374 ---~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~--~~~~~~~h-----------~~~V~~v~f 436 (519)
..........+.-...+. . .+++ .++..+. +.|.+.|+.+. +.+..+.. ......+++
T Consensus 197 ~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 197 AAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred ccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 000000000000011122 2 4444 5555555 89999998654 23332211 111122789
Q ss_pred eeCCCCEEEEEeC---------CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCE-EEEEe-cCCeEEEEECCCCeee
Q 010037 437 NPVDDNYFISGSI---------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKG-GIVGT-MTGNCRFYDIKGMQIF 505 (519)
Q Consensus 437 sp~d~~~l~sgs~---------Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~-l~sgs-~dg~v~iwdl~~~~l~ 505 (519)
+| +++.++.+.. ++.+.++|+.+.+++...........++|+|||+. +++.. .++.|.++|+.+++++
T Consensus 272 s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 272 LK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp ET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred cC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 99 7776665432 23566999999998876555557899999999985 55555 4899999999999876
Q ss_pred e
Q 010037 506 D 506 (519)
Q Consensus 506 ~ 506 (519)
.
T Consensus 351 ~ 351 (368)
T 1mda_H 351 S 351 (368)
T ss_dssp E
T ss_pred E
Confidence 4
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.63 E-value=1.3e-06 Score=85.18 Aligned_cols=157 Identities=7% Similarity=0.002 Sum_probs=109.2
Q ss_pred eecCCCCEEEEEEccCCC-EEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeee
Q 010037 280 FLAHEGSILTMKFSLDGQ-YLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSL 358 (519)
Q Consensus 280 l~~H~~~I~~l~fspdg~-~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (519)
+..+........|+|+|+ ++++...++.|..|+. +++.
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---------------------------------------- 78 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---------------------------------------- 78 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE----------------------------------------
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE----------------------------------------
Confidence 444555677899999998 5677777889999986 3321
Q ss_pred ccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEEe-CCCcEEEEECCCCeEEEEec-----CCCcEE
Q 010037 359 RKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSS-ADKTVRLWQVGIDRCLRVFS-----HNNYVT 432 (519)
Q Consensus 359 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs-~Dg~V~lWdl~~~~~~~~~~-----h~~~V~ 432 (519)
..+..+...+..++++++|.|+++. .++.|.+|+.. ++...... ....++
T Consensus 79 -----------------------~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~ 134 (305)
T 3dr2_A 79 -----------------------DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPN 134 (305)
T ss_dssp -----------------------EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCC
T ss_pred -----------------------EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCC
Confidence 1112234567889999999555554 55789999986 55433322 123467
Q ss_pred EEEEeeCCCCEEEE----EeC-------------CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecC----
Q 010037 433 SVAFNPVDDNYFIS----GSI-------------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMT---- 491 (519)
Q Consensus 433 ~v~fsp~d~~~l~s----gs~-------------Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~d---- 491 (519)
.++++| +++++++ |.. .+.|..||..+++..... .....+.++|+|||+.|+++...
T Consensus 135 ~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 135 DLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp CEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---
T ss_pred CEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCC
Confidence 899999 8998886 432 256888888777655444 44567889999999988887665
Q ss_pred --CeEEEEECCCCe
Q 010037 492 --GNCRFYDIKGMQ 503 (519)
Q Consensus 492 --g~v~iwdl~~~~ 503 (519)
+.|++|++..+.
T Consensus 213 ~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 213 GSVEITAFAWRDGA 226 (305)
T ss_dssp CCCEEEEEEEETTE
T ss_pred CCCEEEEEEecCCC
Confidence 689999987544
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.59 E-value=6.1e-07 Score=89.93 Aligned_cols=228 Identities=7% Similarity=-0.066 Sum_probs=130.1
Q ss_pred ceeecCCCCeEEeee----------cCCeEEEeeCCccccccccccccceeecC-------CCCEEEEEEccCCCEEEEE
Q 010037 240 SATLKPGDHELTLGQ----------RMRRVRVHPVKKQSRELSSLYTGQEFLAH-------EGSILTMKFSLDGQYLASG 302 (519)
Q Consensus 240 ~~~~sp~g~~lasgs----------~dg~I~vw~~~~~~~~~~~~~~~~~l~~H-------~~~I~~l~fspdg~~LaSg 302 (519)
.++++|++++++++. .++.|.+||....... .++..+ -.....+.|+|||++|+.+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv-------~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVa 141 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI-------ADIELPDAPRFSVGPRVHIIGNCASSACLLFF 141 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE-------EEEEETTSCSCCBSCCTTSEEECTTSSCEEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE-------EEEECCCccccccCCCcceEEEcCCCCEEEEE
Confidence 479999999998886 4789999998854432 222211 0224578999999999988
Q ss_pred eC--CCcEEE--EecccCeeeceeeccCCC-----CceEEEeecCCCCeEEeeccC-----Cceeee----eee-----c
Q 010037 303 GE--DGTVRV--WKVIEHERLDGFDVQDTD-----PSCLYFTINHLSQLIPIDVDK-----EKIDKT----KSL-----R 359 (519)
Q Consensus 303 s~--Dg~I~i--Wd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~-----~ 359 (519)
.. ...|.+ +|+.+ +..+...... ....++.....+.+..+.... .+.... ..+ .
T Consensus 142 n~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~ 218 (368)
T 1mda_H 142 LFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ 218 (368)
T ss_dssp ECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEE
T ss_pred ccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccc
Confidence 64 457888 99877 3334322110 000111112222333333332 111000 000 0
Q ss_pred cCCC--------eeEEEeCCccccccccceeEee-------c---cCCCeeEEEEcCCC-eEEEEeC---------CCcE
Q 010037 360 KSSD--------LTCVVLPPKVFRLLEKPLHEFQ-------G---HSSEVLDLSWSKNG-FLLSSSA---------DKTV 411 (519)
Q Consensus 360 ~s~~--------~~~~~~~~~~~~~~~~~~~~~~-------~---h~~~V~~l~~sp~~-~L~sgs~---------Dg~V 411 (519)
.... +.+.+++..... .+.+..+. . .......++++|++ +++.+.. +..+
T Consensus 219 ~~~~~~~~~vs~~~V~viD~~~~~--~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 219 ANYPGMLVWAVASSILQGDIPAAG--ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp ETTTTEEEECBSSCCEEEECCSSC--CEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred cccCCEEEEEcCCEEEEEECCCCc--ceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 0000 112222211000 00000000 0 01112236899998 5554432 2356
Q ss_pred EEEECCCCeEEEEecCCCcEEEEEEeeCCCC-EEEEEe-CCCeEEEEEcCCCcEEeeccCCCceEEEEEee
Q 010037 412 RLWQVGIDRCLRVFSHNNYVTSVAFNPVDDN-YFISGS-IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCP 480 (519)
Q Consensus 412 ~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~-~l~sgs-~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~sp 480 (519)
.++|+.+.+.+..+.-......|+|+| +++ ++++.. .++.|.++|+.+.+++...........+++.+
T Consensus 297 ~ViD~~t~~vv~~i~vg~~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 297 SSVTASVGQTSGPISNGHDSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEEESSSCCEEECCEEEEEECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred EEEECCCCeEEEEEECCCCcceEEECC-CCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence 699999999999887555799999999 776 666776 59999999999999997766666666676654
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.57 E-value=1.7e-05 Score=79.78 Aligned_cols=191 Identities=10% Similarity=-0.030 Sum_probs=125.6
Q ss_pred ecCCCCeEEeeec--CC---eEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe----------CCCc
Q 010037 243 LKPGDHELTLGQR--MR---RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------EDGT 307 (519)
Q Consensus 243 ~sp~g~~lasgs~--dg---~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs----------~Dg~ 307 (519)
..|+++++.+... .. .|.++|....+.. ..+.....+ .+.++|||++|+.+. .++.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~-------~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL-------GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEE-------EEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCe
Confidence 3467776666543 22 8899998754421 223333334 899999999998885 3678
Q ss_pred EEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeecc
Q 010037 308 VRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH 387 (519)
Q Consensus 308 I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h 387 (519)
|.+||..+.+.+..+..... .. .. +
T Consensus 99 v~viD~~t~~~~~~i~~~~~-----------------------------------------------------~~-~~-~ 123 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDA-----------------------------------------------------PR-FD-V 123 (373)
T ss_pred EEEEECCCCcEEEEEECCCc-----------------------------------------------------cc-cc-c
Confidence 99999987765444332100 00 00 1
Q ss_pred CCCeeEEEEcCCC-eEEEEeC--CCcEEEEECCCCeEEEE-ecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcE
Q 010037 388 SSEVLDLSWSKNG-FLLSSSA--DKTVRLWQVGIDRCLRV-FSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQV 463 (519)
Q Consensus 388 ~~~V~~l~~sp~~-~L~sgs~--Dg~V~lWdl~~~~~~~~-~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~ 463 (519)
......++|+|+| +|+.+.. ++.|.++| .+++.+.. +..... +.+.|...+.+++.+.||++.++|. +++.
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence 1234578999999 7777764 57899999 99999888 765443 5566745567778888999999999 8776
Q ss_pred Eeec------cCCCc-eEEEEEeeCCCEEEEEecCCeEEEEECCCC
Q 010037 464 VDYT------DIREI-VSAVCYCPDGKGGIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 464 ~~~~------~~~~~-V~~v~~spdg~~l~sgs~dg~v~iwdl~~~ 502 (519)
+... ....+ .....+.+++..++..+..+.+.+.|+.+.
T Consensus 199 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 199 AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 6321 11112 234567787766666567889999998754
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.54 E-value=7.6e-06 Score=80.59 Aligned_cols=110 Identities=15% Similarity=0.100 Sum_probs=76.9
Q ss_pred CCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecC-----CCcEEEEEEeeCCCCEEEEEeC------CCeEEEEE
Q 010037 389 SEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSH-----NNYVTSVAFNPVDDNYFISGSI------DGKVRIWE 457 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h-----~~~V~~v~fsp~d~~~l~sgs~------Dg~V~iwd 457 (519)
..+.+++|++++.++.++.+ .|.+||..+++....... ...++.++++| +++++++... .+.|..++
T Consensus 90 ~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe
Confidence 45788999999944445544 499999988876544331 24689999999 8887766542 24566666
Q ss_pred cCCCcEEeeccCCCceEEEEEeeCCCEEEEE-ecCCeEEEEECC--CC
Q 010037 458 VRRCQVVDYTDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIK--GM 502 (519)
Q Consensus 458 ~~~~~~~~~~~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~--~~ 502 (519)
+++...+.........++|+|||+.|+.+ +.++.|.+|++. ++
T Consensus 168 --~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 168 --KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp --TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred --CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 55554443334457899999999877655 457899999985 55
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.53 E-value=6.7e-06 Score=83.37 Aligned_cols=195 Identities=16% Similarity=0.229 Sum_probs=127.2
Q ss_pred eec--CCCCeEEe-eecCCeEEEeeCCccccccccccccceee------c-CCCCEEEEEEccCCCEEEEEeCC------
Q 010037 242 TLK--PGDHELTL-GQRMRRVRVHPVKKQSRELSSLYTGQEFL------A-HEGSILTMKFSLDGQYLASGGED------ 305 (519)
Q Consensus 242 ~~s--p~g~~las-gs~dg~I~vw~~~~~~~~~~~~~~~~~l~------~-H~~~I~~l~fspdg~~LaSgs~D------ 305 (519)
.++ +++++|++ |-.+++|.|+|+........ ..+++. . -...-..+...|+| .++++..+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~---~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~ 163 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPK---IIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGP 163 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCE---EEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSC
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCce---eeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCC
Confidence 445 77777755 77789999999864322111 112221 0 11134567888999 77776555
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
|.|.+.|..+.+.+..+.....
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~---------------------------------------------------------- 185 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRG---------------------------------------------------------- 185 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCT----------------------------------------------------------
T ss_pred CeEEEEECCCCeEEEEEccCCC----------------------------------------------------------
Confidence 6788888887776554432110
Q ss_pred ccCCCeeEEEEcCCC-eEEEEe-------------------CCCcEEEEECCCCeEEEEecCC---CcEEEEEE--eeCC
Q 010037 386 GHSSEVLDLSWSKNG-FLLSSS-------------------ADKTVRLWQVGIDRCLRVFSHN---NYVTSVAF--NPVD 440 (519)
Q Consensus 386 ~h~~~V~~l~~sp~~-~L~sgs-------------------~Dg~V~lWdl~~~~~~~~~~h~---~~V~~v~f--sp~d 440 (519)
....-.++-|+|++ .+++.. ...+|.+||+.+++.++++... .....|.| +| +
T Consensus 186 -~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-d 263 (462)
T 2ece_A 186 -DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP-T 263 (462)
T ss_dssp -TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST-T
T ss_pred -CccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC-C
Confidence 01122356778887 666663 3789999999999888888743 34556666 99 8
Q ss_pred CCEEEEEe------CCCeEEEEEcCCCc-----EEeecc----------------CCCceEEEEEeeCCCEEEEEec-CC
Q 010037 441 DNYFISGS------IDGKVRIWEVRRCQ-----VVDYTD----------------IREIVSAVCYCPDGKGGIVGTM-TG 492 (519)
Q Consensus 441 ~~~l~sgs------~Dg~V~iwd~~~~~-----~~~~~~----------------~~~~V~~v~~spdg~~l~sgs~-dg 492 (519)
++++.+++ .+++|.+|....++ .+.... .......|.++|||++|.++.. .+
T Consensus 264 g~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d 343 (462)
T 2ece_A 264 KLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIG 343 (462)
T ss_dssp CCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTT
T ss_pred CCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCC
Confidence 88777766 56788887765542 111111 0245788999999999988766 67
Q ss_pred eEEEEECC
Q 010037 493 NCRFYDIK 500 (519)
Q Consensus 493 ~v~iwdl~ 500 (519)
.|.+||+.
T Consensus 344 ~VavfdV~ 351 (462)
T 2ece_A 344 EVRQYDIS 351 (462)
T ss_dssp EEEEEECS
T ss_pred EEEEEEec
Confidence 89999986
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.49 E-value=1.2e-06 Score=87.03 Aligned_cols=225 Identities=8% Similarity=0.017 Sum_probs=129.7
Q ss_pred ecccceeecCCCCeEEeeec-----CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCC-EEEEEe---CCC
Q 010037 236 DRHGSATLKPGDHELTLGQR-----MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQ-YLASGG---EDG 306 (519)
Q Consensus 236 ~~~~~~~~sp~g~~lasgs~-----dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~-~LaSgs---~Dg 306 (519)
..+..++++|++++.++-.. .+.|.+||....... ..+........+...+..+++++++. .+++-. .++
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~-~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLS-RVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEE-EEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEE-EEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 34556899999987776544 578999998754421 11111001112334578999998654 445554 678
Q ss_pred cEEEEecccCeeeceeeccCCC-CceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 307 TVRVWKVIEHERLDGFDVQDTD-PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 307 ~I~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
.|.+||+.+++....+..+... .....+.... .. ......++.+.
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g-----------~~-----~~~~~~~g~~~------------------ 191 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDG-----------VP-----VQIGQPDGTVI------------------ 191 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETT-----------EE-----CBEECTTSCEE------------------
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECC-----------EE-----EEeccCCCcee------------------
Confidence 9999999887754433221100 0000000000 00 00000011100
Q ss_pred ccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCC-----Ce--------EEEEecCCCcEEEEEEeeCCCCEEEEEeCCC
Q 010037 386 GHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGI-----DR--------CLRVFSHNNYVTSVAFNPVDDNYFISGSIDG 451 (519)
Q Consensus 386 ~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~-----~~--------~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg 451 (519)
.....+..|+|+|++ .|+.+..++. ++|.+.. +. .+....+......+++++ +++++++...++
T Consensus 192 ~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~ 269 (343)
T 2qe8_A 192 RPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHS 269 (343)
T ss_dssp CCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGT
T ss_pred ceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCC
Confidence 011346789999999 7877776653 4444321 10 012223344567799999 899999998999
Q ss_pred eEEEEEcCCCcEEeecc--CCCceEEEEEeeCCCEEEEEecCCeEEEE
Q 010037 452 KVRIWEVRRCQVVDYTD--IREIVSAVCYCPDGKGGIVGTMTGNCRFY 497 (519)
Q Consensus 452 ~V~iwd~~~~~~~~~~~--~~~~V~~v~~spdg~~l~sgs~dg~v~iw 497 (519)
.|.+||..+++...... ....++++++.++|+++++.+..+.+.+|
T Consensus 270 ~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 270 AIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred eEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 99999995665443322 24568999999999988887755554443
No 225
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.49 E-value=8.3e-06 Score=79.06 Aligned_cols=199 Identities=12% Similarity=0.072 Sum_probs=117.1
Q ss_pred CCEEEEEEccCC-CEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCC
Q 010037 285 GSILTMKFSLDG-QYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSD 363 (519)
Q Consensus 285 ~~I~~l~fspdg-~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 363 (519)
.-.-+..|++++ .++++...++.|..||..++... .+.. ...+..+.+.++.. ++... .
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~~~~i~~~~dG~--l~v~~----------------~ 72 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM-DAPVSSVALRQSGG--YVATI----------------G 72 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC-SSCEEEEEEBTTSS--EEEEE----------------T
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC-CCceEEEEECCCCC--EEEEE----------------C
Confidence 345678999954 56666677899999999877542 2222 22334444443332 22211 1
Q ss_pred eeEEEeCCccccccccceeEee--ccCCCeeEEEEcCCCeEEEEe-C---------CCcEEEEECCC-CeEEEEecCCCc
Q 010037 364 LTCVVLPPKVFRLLEKPLHEFQ--GHSSEVLDLSWSKNGFLLSSS-A---------DKTVRLWQVGI-DRCLRVFSHNNY 430 (519)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~l~~sp~~~L~sgs-~---------Dg~V~lWdl~~-~~~~~~~~h~~~ 430 (519)
..+..++.....+ +.+.... .....+.+++++|+|.|+.++ . .....||.+.. ++......+...
T Consensus 73 ~~l~~~d~~~g~~--~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~ 150 (297)
T 3g4e_A 73 TKFCALNWKEQSA--VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDI 150 (297)
T ss_dssp TEEEEEETTTTEE--EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESB
T ss_pred CeEEEEECCCCcE--EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecccc
Confidence 1223333221110 0011111 112457899999999433333 1 23345665543 344444445556
Q ss_pred EEEEEEeeCCCCEE-EEEeCCCeEEEEEc--CCCcEE------eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 431 VTSVAFNPVDDNYF-ISGSIDGKVRIWEV--RRCQVV------DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 431 V~~v~fsp~d~~~l-~sgs~Dg~V~iwd~--~~~~~~------~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
.+.++|+| +++.| ++.+.++.|.+|++ .++.+. .+......+..+++.++|++.++....+.|..||..+
T Consensus 151 pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 151 SNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred ccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 78999999 88765 55566789999997 455432 1222345678999999998777777788899999987
Q ss_pred Ceeee
Q 010037 502 MQIFD 506 (519)
Q Consensus 502 ~~l~~ 506 (519)
+++..
T Consensus 230 G~~~~ 234 (297)
T 3g4e_A 230 GKRLQ 234 (297)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 77643
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=2.6e-05 Score=79.53 Aligned_cols=192 Identities=11% Similarity=0.043 Sum_probs=128.7
Q ss_pred CCCCeEEeeec-C----CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe----------CCCcEE
Q 010037 245 PGDHELTLGQR-M----RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG----------EDGTVR 309 (519)
Q Consensus 245 p~g~~lasgs~-d----g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs----------~Dg~I~ 309 (519)
|+++.+++... + +.|.+.|....+.. ..+..-..+ .+.++|||++|+.+. .++.|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv-------~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs 152 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRIL-------GMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVE 152 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEE-------EEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEE-------EEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEE
Confidence 45555555433 2 79999998754432 223323345 799999999887775 367899
Q ss_pred EEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCC
Q 010037 310 VWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSS 389 (519)
Q Consensus 310 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 389 (519)
++|..+++.+..+...... .+ ....
T Consensus 153 viD~~t~~vv~~I~v~g~~------------------------------------------------------r~-~~g~ 177 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAP------------------------------------------------------RF-LVGT 177 (426)
T ss_dssp EECTTTCCEEEEEEETTCC------------------------------------------------------CC-CBSC
T ss_pred EEECCCCcEEEEEECCCcc------------------------------------------------------cc-ccCC
Confidence 9999888766554331000 00 0012
Q ss_pred CeeEEEEcCCC-eEEEEeC--CCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee
Q 010037 390 EVLDLSWSKNG-FLLSSSA--DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY 466 (519)
Q Consensus 390 ~V~~l~~sp~~-~L~sgs~--Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~ 466 (519)
....++++|+| +|+.+.. ++.|.+.|+.+++.+..+.-... ....|.....+++.+.||++.+.+..++++...
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 34578899999 7777764 57899999999999998875443 344553457778888899999899866665521
Q ss_pred ----cc-CCCc-eEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 467 ----TD-IREI-VSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 467 ----~~-~~~~-V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
.. ...+ ...+.|.+++..++..+..|.|.+.|+.+..
T Consensus 255 ~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 255 NTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp ECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC
T ss_pred eeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc
Confidence 11 1111 1235789999988888889999999986554
No 227
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.37 E-value=0.0004 Score=65.75 Aligned_cols=233 Identities=8% Similarity=-0.031 Sum_probs=124.7
Q ss_pred CeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEE-EEeCCCcEEEEecccCeeeceeeccC
Q 010037 248 HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGEDGTVRVWKVIEHERLDGFDVQD 326 (519)
Q Consensus 248 ~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-Sgs~Dg~I~iWd~~~~~~~~~~~~~~ 326 (519)
.+|+.+.. +.|+.+++....... ......+......+..++|++++..|+ +-..++.|..+++........+....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~--~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKK--TEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCG--GGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCccccc--ccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 44555543 578888876543210 000001122234578999999765555 44457899999987654322222111
Q ss_pred CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee-ccCCCeeEEEEcCC-CeEEE
Q 010037 327 TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ-GHSSEVLDLSWSKN-GFLLS 404 (519)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~-~~L~s 404 (519)
..+..+.+.+.. ..++....... .+..++.. +.....+. ........++++|+ +.|+.
T Consensus 79 ~~p~~ia~d~~~-~~lyv~d~~~~--------------~I~~~~~~-----g~~~~~~~~~~~~~P~~i~vd~~~g~lyv 138 (267)
T 1npe_A 79 GSPEGIALDHLG-RTIFWTDSQLD--------------RIEVAKMD-----GTQRRVLFDTGLVNPRGIVTDPVRGNLYW 138 (267)
T ss_dssp CCEEEEEEETTT-TEEEEEETTTT--------------EEEEEETT-----SCSCEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred CCccEEEEEecC-CeEEEEECCCC--------------EEEEEEcC-----CCCEEEEEECCCCCccEEEEeeCCCEEEE
Confidence 233334433221 22332222221 22222111 01111111 11245689999995 45555
Q ss_pred EeC---CCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCEE-EEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEe
Q 010037 405 SSA---DKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYF-ISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYC 479 (519)
Q Consensus 405 gs~---Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~l-~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~s 479 (519)
+.. .+.|..+++......... ..-.....++++| ++..| ++-...+.|.++|+.................++.
T Consensus 139 ~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~- 216 (267)
T 1npe_A 139 TDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS- 216 (267)
T ss_dssp EECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEE-
T ss_pred EECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEE-
Confidence 443 468888887654322222 2334688999999 65554 5555678999999986554433322334456665
Q ss_pred eCCCEEEEEe-cCCeEEEEECCCCeeee
Q 010037 480 PDGKGGIVGT-MTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 480 pdg~~l~sgs-~dg~v~iwdl~~~~l~~ 506 (519)
++..|+++. ..+.|.++|..++++..
T Consensus 217 -d~~~lyva~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 217 -YGKNLYYTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp -ETTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -eCCEEEEEECCCCeEEEEeCCCCCceE
Confidence 345555555 56899999999887654
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.32 E-value=3.9e-05 Score=83.43 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=68.5
Q ss_pred CcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeec--cCCCceEEEEEeeCCCEEE
Q 010037 409 KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT--DIREIVSAVCYCPDGKGGI 486 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~--~~~~~V~~v~~spdg~~l~ 486 (519)
+.|..||+.+++.+-.+.+...+....+.+ .+.+++.++.||.|++||+.+++++... .......-+.|.++|+.++
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 789999999999998887766666667777 7788888999999999999999988432 3333334567788997554
Q ss_pred EE-ec----------------CCeEEEEECC
Q 010037 487 VG-TM----------------TGNCRFYDIK 500 (519)
Q Consensus 487 sg-s~----------------dg~v~iwdl~ 500 (519)
+. +. .+.+.+|.+.
T Consensus 536 ~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 536 SVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp EEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred EEeccCCccccccccccccCCCCeEEEEecc
Confidence 42 22 3677777775
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.27 E-value=5.6e-05 Score=79.28 Aligned_cols=249 Identities=11% Similarity=0.001 Sum_probs=149.2
Q ss_pred CCCCeEEeeec-CCeEEEeeCCccccccccccccceee-cCCCCEEEEEE-c-cCCCEEEEEe-----------------
Q 010037 245 PGDHELTLGQR-MRRVRVHPVKKQSRELSSLYTGQEFL-AHEGSILTMKF-S-LDGQYLASGG----------------- 303 (519)
Q Consensus 245 p~g~~lasgs~-dg~I~vw~~~~~~~~~~~~~~~~~l~-~H~~~I~~l~f-s-pdg~~LaSgs----------------- 303 (519)
|||+++.+... +++|.+.|+...+. .+.+. .....+..+++ + |++.+++.++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~-------~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKC-------DAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEE-------EEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceE-------eeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccc
Confidence 48888877554 56799999875432 12111 11235788888 5 9999998885
Q ss_pred -CCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCce-----------eeeee---------eccCC
Q 010037 304 -EDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKI-----------DKTKS---------LRKSS 362 (519)
Q Consensus 304 -~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---------~~~s~ 362 (519)
.++.+.+.|..+.+...++.... .+..+...+++ ..++......... ..... +..+.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred ccCceEEEEECCCCeEEEEEEeCC-CccceEECCCC-CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 34679999999998888877654 34455554442 2222222211110 00000 00000
Q ss_pred ---CeeEEEeCCccccccccc-eeEeeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCe------------EEEE
Q 010037 363 ---DLTCVVLPPKVFRLLEKP-LHEFQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDR------------CLRV 424 (519)
Q Consensus 363 ---~~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~------------~~~~ 424 (519)
-+.+.+++..... .+. +..+.. .....++.++|+| .++++..+.+|.++|+.+.+ ....
T Consensus 250 ~~~i~~V~VID~~~~~--~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEA--SSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp SEEETTEEEEECSGGG--CCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred eeEECcEEEEeCcccC--CceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 0123344333211 112 222221 2356789999999 45555678999999999653 4555
Q ss_pred ecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC----------CcEEeeccCCCceE------EEEEeeCCCEEEEE
Q 010037 425 FSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR----------CQVVDYTDIREIVS------AVCYCPDGKGGIVG 488 (519)
Q Consensus 425 ~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~----------~~~~~~~~~~~~V~------~v~~spdg~~l~sg 488 (519)
..-......++|+| +|...++...|++|.+||+.+ .+++.........- .+.++|||++|+++
T Consensus 327 v~vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 327 PELGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp CBCCSCEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred cCCCCCcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 55667789999999 885556677899999999977 45554333222221 22457999999987
Q ss_pred ecC--CeE-----------EEEECCCCeeee
Q 010037 489 TMT--GNC-----------RFYDIKGMQIFD 506 (519)
Q Consensus 489 s~d--g~v-----------~iwdl~~~~l~~ 506 (519)
..- ..+ .++|+.++++..
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis~~~m~l 436 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDISGDKMVL 436 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECSSSSCEE
T ss_pred CCCCccccccCCCCCCCcceEEEcCCCcEEE
Confidence 642 233 889998766543
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.27 E-value=0.0002 Score=67.91 Aligned_cols=189 Identities=6% Similarity=-0.003 Sum_probs=122.7
Q ss_pred ceeecCCCCeEEeeec--CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEE-EEeCCCcEEEEecccC
Q 010037 240 SATLKPGDHELTLGQR--MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGEDGTVRVWKVIEH 316 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~--dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-Sgs~Dg~I~iWd~~~~ 316 (519)
.++|+|++.+.++.+. ++.|.+.|...++.... .. +..+. ....+++. ++.|. +.-.++.|.++|..+.
T Consensus 25 Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~-i~----l~~~~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENI-HK----MDDSY-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEE-EE----CCTTC-CEEEEEEE--TTEEEEEETTCSEEEEEETTTT
T ss_pred cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEE-Ee----cCCCc-ceEEEEEe--CCEEEEEEecCCEEEEEECCCC
Confidence 4789998754444432 68999999986553221 11 11221 12245554 44454 4446789999999888
Q ss_pred eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEE
Q 010037 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (519)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 396 (519)
+.+..+... ...-.. .
T Consensus 97 ~v~~~i~~g--------------------------------------------------------------~~~g~g--l 112 (266)
T 2iwa_A 97 SNIKNFTHQ--------------------------------------------------------------MKDGWG--L 112 (266)
T ss_dssp EEEEEEECC--------------------------------------------------------------SSSCCE--E
T ss_pred cEEEEEECC--------------------------------------------------------------CCCeEE--E
Confidence 765544321 000112 3
Q ss_pred cCCC-eEEEEeCCCcEEEEECCCCeEEEEecCC------CcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccC
Q 010037 397 SKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHN------NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI 469 (519)
Q Consensus 397 sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~------~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~ 469 (519)
++++ .|+.+..+++|.++|..+.+.+..+.-. ..++.+.|. ++..++....++.|.+.|..+++++.....
T Consensus 113 t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 113 ATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp EECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred EECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 3455 5666667899999999999988887521 246788887 465666655688999999999998854432
Q ss_pred C--------------CceEEEEEeeCCCEEE-EEecCCeEEEEECCCC
Q 010037 470 R--------------EIVSAVCYCPDGKGGI-VGTMTGNCRFYDIKGM 502 (519)
Q Consensus 470 ~--------------~~V~~v~~spdg~~l~-sgs~dg~v~iwdl~~~ 502 (519)
. ...+.|+|+|+++.|+ ++...+.+.+.++...
T Consensus 191 ~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 191 PNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 1 3568999999987655 5556788888887643
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.27 E-value=5.1e-05 Score=82.51 Aligned_cols=104 Identities=12% Similarity=0.109 Sum_probs=80.2
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEecCC--C----------cE------------------------EEEEEeeCCCCEE
Q 010037 401 FLLSSSADKTVRLWQVGIDRCLRVFSHN--N----------YV------------------------TSVAFNPVDDNYF 444 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWdl~~~~~~~~~~h~--~----------~V------------------------~~v~fsp~d~~~l 444 (519)
.++.++.+|.|+++|..+++.+..+... . .+ ..++|+| +..++
T Consensus 329 ~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~ 407 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLV 407 (677)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEE
Confidence 6788899999999999999988766411 1 11 1468899 67777
Q ss_pred EEEeC-------------------------------------------CCeEEEEEcCCCcEEeeccCCCceEEEEEeeC
Q 010037 445 ISGSI-------------------------------------------DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPD 481 (519)
Q Consensus 445 ~sgs~-------------------------------------------Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spd 481 (519)
++... .|.|..||+.+++++-...+...+....+..+
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA 487 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEET
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeC
Confidence 76543 27899999999998855555555666677788
Q ss_pred CCEEEEEecCCeEEEEECCCCeee
Q 010037 482 GKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 482 g~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
+..+++++.||.+++||+.+++++
T Consensus 488 g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 488 GNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCcEEEEECCCCcee
Confidence 889999999999999999998764
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.27 E-value=9.2e-08 Score=96.32 Aligned_cols=141 Identities=12% Similarity=0.053 Sum_probs=76.5
Q ss_pred CCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccc
Q 010037 295 DGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (519)
Q Consensus 295 dg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 374 (519)
++..|++++.||.|+.||..+++.+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------------------------------------------------- 37 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------------------------------------------------- 37 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--------------------------------------------------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--------------------------------------------------
Confidence 577899999999999999999886544322
Q ss_pred cccccceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEecCC--CcEEE-EEEeeCCCCEEEEEeCC
Q 010037 375 RLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFSHN--NYVTS-VAFNPVDDNYFISGSID 450 (519)
Q Consensus 375 ~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h~--~~V~~-v~fsp~d~~~l~sgs~D 450 (519)
+.+.+..+..++ .+++++.|+.|+.||..+++.+..+... ..+.+ ..+. .+..+++|+.|
T Consensus 38 --------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~--~~~~v~~g~~d 101 (369)
T 2hz6_A 38 --------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS--SDGILYMGKKQ 101 (369)
T ss_dssp --------------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEE
T ss_pred --------------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe--cCCEEEEEeCC
Confidence 111122223445 6677789999999999998877665421 11100 0111 34567888889
Q ss_pred CeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 451 GKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 451 g~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
+.|+.||..+++.+....... ...++|++..|++++.+|.|+.||..++++
T Consensus 102 g~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp EEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred CEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 999999999998874332222 245677888999999999999999998875
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.24 E-value=5.8e-05 Score=82.23 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=76.9
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEecCCC--c--------------------------------------EEEEEEeeCC
Q 010037 401 FLLSSSADKTVRLWQVGIDRCLRVFSHNN--Y--------------------------------------VTSVAFNPVD 440 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~--~--------------------------------------V~~v~fsp~d 440 (519)
.++.++.+|.++++|..+++.+....... . -..++|+| +
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~ 399 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-D 399 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-T
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-C
Confidence 57888899999999999999875432110 0 11268888 6
Q ss_pred CCEEEEEeC---------------------------------------------CCeEEEEEcCCCcEEeeccCCCceEE
Q 010037 441 DNYFISGSI---------------------------------------------DGKVRIWEVRRCQVVDYTDIREIVSA 475 (519)
Q Consensus 441 ~~~l~sgs~---------------------------------------------Dg~V~iwd~~~~~~~~~~~~~~~V~~ 475 (519)
..++++... +|.|+.||+.+++++-...+...+..
T Consensus 400 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~ 479 (689)
T 1yiq_A 400 TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNG 479 (689)
T ss_dssp TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCC
T ss_pred CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccC
Confidence 666666532 37899999999998854444444444
Q ss_pred EEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 476 VCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 476 v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
..+...|.++++|+.||.++.||.++++++
T Consensus 480 g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 480 GTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 567778889999999999999999998754
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.24 E-value=0.00012 Score=71.62 Aligned_cols=202 Identities=8% Similarity=-0.002 Sum_probs=118.0
Q ss_pred cceeecCCCCeEEeeecCCeEEEeeCCcccccccccccc------------ceeecCCCCEEEEEEcc-CCCEEEEEeCC
Q 010037 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTG------------QEFLAHEGSILTMKFSL-DGQYLASGGED 305 (519)
Q Consensus 239 ~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~------------~~l~~H~~~I~~l~fsp-dg~~LaSgs~D 305 (519)
..+++++++.++.++..++.|..|+.............. .........+..|++.+ +|+ |+.+...
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~ 100 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCY 100 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETT
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECC
Confidence 357899999888888889999999876432211000000 00001123578999998 665 4445444
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ 385 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
+.|..+|..++.. ..+.. ...
T Consensus 101 ~~i~~~d~~~g~~-~~~~~----------------------------------------------------------~~~ 121 (322)
T 2fp8_A 101 YHLSVVGSEGGHA-TQLAT----------------------------------------------------------SVD 121 (322)
T ss_dssp TEEEEECTTCEEC-EEEES----------------------------------------------------------EET
T ss_pred CCEEEEeCCCCEE-EEecc----------------------------------------------------------cCC
Confidence 4577777654321 11100 000
Q ss_pred -ccCCCeeEEEEcC-CCeEEEEeC------------------CCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEE
Q 010037 386 -GHSSEVLDLSWSK-NGFLLSSSA------------------DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 386 -~h~~~V~~l~~sp-~~~L~sgs~------------------Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~ 445 (519)
........+++.+ +|.|+.+.. ++.|..||..+++.......-...+.|+|+| ++++|+
T Consensus 122 ~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~-dg~~ly 200 (322)
T 2fp8_A 122 GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSA-DSSFVL 200 (322)
T ss_dssp TEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECT-TSSEEE
T ss_pred CCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECC-CCCEEE
Confidence 0112356678888 773333321 3678888887776544333223456799999 887555
Q ss_pred EE-eCCCeEEEEEcCCC---cEEeeccCCCceEEEEEeeCCCEEEEEec----------CCeEEEEECCCC
Q 010037 446 SG-SIDGKVRIWEVRRC---QVVDYTDIREIVSAVCYCPDGKGGIVGTM----------TGNCRFYDIKGM 502 (519)
Q Consensus 446 sg-s~Dg~V~iwd~~~~---~~~~~~~~~~~V~~v~~spdg~~l~sgs~----------dg~v~iwdl~~~ 502 (519)
.+ +..+.|.+|++... ....+..... ...+++.++|+++++... .+.|..+|..+.
T Consensus 201 v~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~ 270 (322)
T 2fp8_A 201 VAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGN 270 (322)
T ss_dssp EEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSC
T ss_pred EEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCC
Confidence 44 56689999998752 2211212223 788999999986666544 466888887543
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.23 E-value=7.4e-05 Score=70.94 Aligned_cols=155 Identities=8% Similarity=0.034 Sum_probs=105.9
Q ss_pred EEEEEEccCCCEEEEEeC--CCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCe
Q 010037 287 ILTMKFSLDGQYLASGGE--DGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (519)
Q Consensus 287 I~~l~fspdg~~LaSgs~--Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 364 (519)
...|.|++++..+++.+. ++.|++.|+.+++.+..+.....
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~------------------------------------- 65 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS------------------------------------- 65 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-------------------------------------
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-------------------------------------
Confidence 689999998765555553 57999999999987655432110
Q ss_pred eEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCC-CcEEEEEEeeCCCCE
Q 010037 365 TCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHN-NYVTSVAFNPVDDNY 443 (519)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~-~~V~~v~fsp~d~~~ 443 (519)
.....+++..+...++.-.++.|.++|..+.+.+..+... .. ...+++ ++..
T Consensus 66 ------------------------~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~-Dg~~ 118 (266)
T 2iwa_A 66 ------------------------YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLAT-DGKI 118 (266)
T ss_dssp ------------------------CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEE-CSSS
T ss_pred ------------------------cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEE-CCCE
Confidence 0112344443224445557889999999999999998744 22 234566 6665
Q ss_pred EEEEeCCCeEEEEEcCCCcEEeeccCC------CceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 444 FISGSIDGKVRIWEVRRCQVVDYTDIR------EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 444 l~sgs~Dg~V~iwd~~~~~~~~~~~~~------~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
++++..+++|.++|..+.+++...... ..++.+.|. +|...+....++.|.+.|+.++++..
T Consensus 119 l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 119 LYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLG 186 (266)
T ss_dssp EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEE
T ss_pred EEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEE
Confidence 666667889999999998877432221 236788888 77655555567899999999998754
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.23 E-value=6.9e-05 Score=75.96 Aligned_cols=182 Identities=12% Similarity=0.129 Sum_probs=112.2
Q ss_pred eeecCCCCeEEeeecC------CeEEEeeCCccccccccccccceeecCC-CCEEEEEEccCCCEEEEEe----------
Q 010037 241 ATLKPGDHELTLGQRM------RRVRVHPVKKQSRELSSLYTGQEFLAHE-GSILTMKFSLDGQYLASGG---------- 303 (519)
Q Consensus 241 ~~~sp~g~~lasgs~d------g~I~vw~~~~~~~~~~~~~~~~~l~~H~-~~I~~l~fspdg~~LaSgs---------- 303 (519)
+...|+| +++++..+ |.|.+.|.......- .+.. ..+. .--..+-|+|+++.+++..
T Consensus 143 ~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~-~~~~----~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 143 VHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLG-KWEI----DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDG 216 (462)
T ss_dssp EEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEE-ECCS----BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTC
T ss_pred eeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEE-EEcc----CCCCccccceEEECCCCCEEEEccCcCccccccc
Confidence 4677888 66554444 789999987443211 1110 1111 1234578899999888874
Q ss_pred ---------CCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccc
Q 010037 304 ---------EDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF 374 (519)
Q Consensus 304 ---------~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 374 (519)
...+|.+||+.+++.+..+....
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~------------------------------------------------ 248 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE------------------------------------------------ 248 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEEESCT------------------------------------------------
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEEecCC------------------------------------------------
Confidence 36799999998876554443210
Q ss_pred cccccceeEeeccCCCeeEE--EEcCCC-eEEE-Ee-----CCCcEEEEECCCCeE--EEEe--cC--------------
Q 010037 375 RLLEKPLHEFQGHSSEVLDL--SWSKNG-FLLS-SS-----ADKTVRLWQVGIDRC--LRVF--SH-------------- 427 (519)
Q Consensus 375 ~~~~~~~~~~~~h~~~V~~l--~~sp~~-~L~s-gs-----~Dg~V~lWdl~~~~~--~~~~--~h-------------- 427 (519)
.......| +|+|++ +++. +- .+++|.+|....++. ++.+ ..
T Consensus 249 ------------~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f 316 (462)
T 2ece_A 249 ------------ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPF 316 (462)
T ss_dssp ------------TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGG
T ss_pred ------------CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccc
Confidence 00112233 348888 4444 44 667887766554432 1111 10
Q ss_pred ---CCcEEEEEEeeCCCCEEEEEeC-CCeEEEEEcCC---CcEEeeccCC---------------CceEEEEEeeCCCEE
Q 010037 428 ---NNYVTSVAFNPVDDNYFISGSI-DGKVRIWEVRR---CQVVDYTDIR---------------EIVSAVCYCPDGKGG 485 (519)
Q Consensus 428 ---~~~V~~v~fsp~d~~~l~sgs~-Dg~V~iwd~~~---~~~~~~~~~~---------------~~V~~v~~spdg~~l 485 (519)
......|.++| |+++|.++.. .+.|.+||+.. .+++...... .....++++|||++|
T Consensus 317 ~~~~~~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L 395 (462)
T 2ece_A 317 KAVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV 395 (462)
T ss_dssp TEECCCCCCEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred ccCCCceeEEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence 24578899999 8988887765 78999999863 2444322222 135789999999999
Q ss_pred EEEe
Q 010037 486 IVGT 489 (519)
Q Consensus 486 ~sgs 489 (519)
+++.
T Consensus 396 yVaN 399 (462)
T 2ece_A 396 YVTN 399 (462)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9988
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.19 E-value=0.00013 Score=71.06 Aligned_cols=216 Identities=14% Similarity=0.046 Sum_probs=130.9
Q ss_pred CCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccC
Q 010037 247 DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQD 326 (519)
Q Consensus 247 g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~ 326 (519)
+..+.+++.++.|..++.. +... . .+..+...+.++...+++. |..++.++.|..+|.. ++....+....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~-~------~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEK-W------RFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEE-E------EEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEE-E------EEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 5567778888999999876 3321 1 1222334456667777776 5567788999999988 76655554433
Q ss_pred CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEEe
Q 010037 327 TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSS 406 (519)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs 406 (519)
.....+... ....++.. + ..+..++.. ++.+..+......+.++...+++.|..++
T Consensus 177 ~~~~~~~~d--~~g~l~v~---------------t--~~l~~~d~~-----g~~~~~~~~~~~~~~~~~~~~~g~l~v~t 232 (330)
T 3hxj_A 177 AITSAASIG--KDGTIYFG---------------S--DKVYAINPD-----GTEKWNFYAGYWTVTRPAISEDGTIYVTS 232 (330)
T ss_dssp CCCSCCEEC--TTCCEEEE---------------S--SSEEEECTT-----SCEEEEECCSSCCCSCCEECTTSCEEEEE
T ss_pred CceeeeEEc--CCCEEEEE---------------e--CEEEEECCC-----CcEEEEEccCCcceeceEECCCCeEEEEc
Confidence 322222221 11111111 1 223333311 12223333344668888888888888888
Q ss_pred CCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE-eeccCCCceEEEEEeeCCCE
Q 010037 407 ADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV-DYTDIREIVSAVCYCPDGKG 484 (519)
Q Consensus 407 ~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~~~~V~~v~~spdg~~ 484 (519)
.++.|..+|. ++..+..+. ....+.++.+.+ ++ .|..++.+|.|..+|. +++.+ ........+.++...++|+
T Consensus 233 ~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~-~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~- 307 (330)
T 3hxj_A 233 LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGN-TD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT- 307 (330)
T ss_dssp TTTEEEEECT-TSCEEEEEECSSCCCSCCEECT-TS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-
T ss_pred CCCeEEEECC-CCCEeEEeeCCCCccccceEcC-CC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-
Confidence 8888999974 555555554 333344455554 44 5667788889999996 56655 3333445567777778886
Q ss_pred EEEEecCCeEEEEECCC
Q 010037 485 GIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 485 l~sgs~dg~v~iwdl~~ 501 (519)
|.+++.+|.+++.....
T Consensus 308 l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 308 IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EEEECTTSCEEEEEC--
T ss_pred EEEEcCCCeEEEEeccc
Confidence 67789999999987754
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.18 E-value=0.0027 Score=63.11 Aligned_cols=248 Identities=10% Similarity=0.056 Sum_probs=134.9
Q ss_pred CCCeEEeeecCCeEEEeeCCccccccccccccceee-cC--CCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeecee
Q 010037 246 GDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFL-AH--EGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGF 322 (519)
Q Consensus 246 ~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~-~H--~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~ 322 (519)
.+..+++++.++.|..+|...++..-. ........ .+ ...+.+.- ..++..++.++.++.|..+|..+++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWS-VSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEE-EECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeee-ecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 456777788889999999875553211 11100000 00 12232221 224557778889999999999999887666
Q ss_pred eccCCCCce------EEEeecCCCCeEEeeccCCceeeeee---------------------eccCCCeeEEEeCCcccc
Q 010037 323 DVQDTDPSC------LYFTINHLSQLIPIDVDKEKIDKTKS---------------------LRKSSDLTCVVLPPKVFR 375 (519)
Q Consensus 323 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~s~~~~~~~~~~~~~~ 375 (519)
......... ..+.......+..++...+....... +.+..++.+..++...
T Consensus 130 ~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~t-- 207 (376)
T 3q7m_A 130 KVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQ-- 207 (376)
T ss_dssp ECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTT--
T ss_pred eCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCC--
Confidence 554322111 12222223334444443322211111 1111122222232221
Q ss_pred ccccceeEeeccCC-------CeeEEEEc---CCCeEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEE
Q 010037 376 LLEKPLHEFQGHSS-------EVLDLSWS---KNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 376 ~~~~~~~~~~~h~~-------~V~~l~~s---p~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~ 445 (519)
++.+........ .+..+.-. .++.++.++.++.|..+|..+++.+....... ...+.. ++..++
T Consensus 208 --G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~---~~~~l~ 281 (376)
T 3q7m_A 208 --GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV---DGNRIY 281 (376)
T ss_dssp --CCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE---ETTEEE
T ss_pred --CcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE---ECCEEE
Confidence 111111111100 00001111 13478888889999999999998887665333 344443 456788
Q ss_pred EEeCCCeEEEEEcCCCcEEeecc-C-CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 446 SGSIDGKVRIWEVRRCQVVDYTD-I-REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 446 sgs~Dg~V~iwd~~~~~~~~~~~-~-~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
.++.++.|..+|..+++.+.... . ...+..... .+..|++++.+|.++++|..++++.
T Consensus 282 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp EEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 88889999999999998873322 1 222222333 3567889999999999999988764
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.15 E-value=9e-05 Score=80.73 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=59.8
Q ss_pred CCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-ec-cCCCceEEEEEeeCCCEE
Q 010037 408 DKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YT-DIREIVSAVCYCPDGKGG 485 (519)
Q Consensus 408 Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~-~~~~~V~~v~~spdg~~l 485 (519)
++.|+.||+.+++.+-.+.+...+..-.+.. .+.+++.|+.||.|+.||.++++++. +. .......-+.|..+|+..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 4789999999999988887555555556666 78899999999999999999999984 32 222223457788999754
Q ss_pred EE
Q 010037 486 IV 487 (519)
Q Consensus 486 ~s 487 (519)
++
T Consensus 533 v~ 534 (689)
T 1yiq_A 533 VT 534 (689)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 240
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.10 E-value=0.00018 Score=67.69 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=103.6
Q ss_pred EEEEEEccCCCEEEEEeCCC--cEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCe
Q 010037 287 ILTMKFSLDGQYLASGGEDG--TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDL 364 (519)
Q Consensus 287 I~~l~fspdg~~LaSgs~Dg--~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 364 (519)
...|.|+ ++.++.+.+.+| .|+++|+.+++.+..+.....
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~------------------------------------- 86 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR------------------------------------- 86 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-------------------------------------
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-------------------------------------
Confidence 4789998 677777777776 899999999987655543210
Q ss_pred eEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEE
Q 010037 365 TCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYF 444 (519)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l 444 (519)
...-.++...+...++.-.++.+.+||..+.+.+.++.....=..++ + ++..|
T Consensus 87 ------------------------~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~-dg~~L 139 (262)
T 3nol_A 87 ------------------------YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--H-NDQYL 139 (262)
T ss_dssp ------------------------CCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEE--E-CSSCE
T ss_pred ------------------------cceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEe--c-CCCEE
Confidence 00111222222233344468899999999999999998544323333 5 56666
Q ss_pred EEEeCCCeEEEEEcCCCcEEeeccC---C---CceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 445 ISGSIDGKVRIWEVRRCQVVDYTDI---R---EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 445 ~sgs~Dg~V~iwd~~~~~~~~~~~~---~---~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+....+++|.++|..+.+++..... . ..++.+.|. +|+..+..-.++.|.+.|.+++++..
T Consensus 140 ~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 140 IMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp EECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred EEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEE
Confidence 6655678899999999887743221 1 334567776 77655555568899999999998754
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.05 E-value=0.00041 Score=65.21 Aligned_cols=174 Identities=11% Similarity=0.095 Sum_probs=113.0
Q ss_pred eeecCCCCeEEeeecCC--eEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEE-eCCCcEEEEecccCe
Q 010037 241 ATLKPGDHELTLGQRMR--RVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASG-GEDGTVRVWKVIEHE 317 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg--~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSg-s~Dg~I~iWd~~~~~ 317 (519)
+.|+ ++.+..+.+.+| .|+++|...++.... +.- ..........++++.|..+ -.++.+.+||..+.+
T Consensus 48 L~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~-------~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 48 FFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQ-------IEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEE-------EEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred EEEE-CCEEEEECCCCCCceEEEEECCCCcEEEE-------Eec-CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 6777 666666666666 899999886654321 111 1222222223334444444 458899999998888
Q ss_pred eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEc
Q 010037 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 397 (519)
.+.++.... .-..++
T Consensus 119 ~~~ti~~~~---------------------------------------------------------------eG~glt-- 133 (262)
T 3nol_A 119 QVRSFNYDG---------------------------------------------------------------EGWGLT-- 133 (262)
T ss_dssp EEEEEECSS---------------------------------------------------------------CCCCEE--
T ss_pred EEEEEECCC---------------------------------------------------------------CceEEe--
Confidence 665553210 112233
Q ss_pred CCC-eEEEEeCCCcEEEEECCCCeEEEEecC---C---CcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccC-
Q 010037 398 KNG-FLLSSSADKTVRLWQVGIDRCLRVFSH---N---NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI- 469 (519)
Q Consensus 398 p~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~h---~---~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~- 469 (519)
+++ .|+.+..++.|.++|..+.+.+..+.- . ..++.+.|. ++.+++..-.+..|.+.|..+++++.....
T Consensus 134 ~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 134 HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 344 565555678899999999998888752 2 335567775 576666665788999999999998853322
Q ss_pred ------------CCceEEEEEeeCCCEEEEEec
Q 010037 470 ------------REIVSAVCYCPDGKGGIVGTM 490 (519)
Q Consensus 470 ------------~~~V~~v~~spdg~~l~sgs~ 490 (519)
....+.|||+|+++.|.+.+.
T Consensus 212 ~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 212 GILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 235689999999988888774
No 242
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.04 E-value=0.00036 Score=65.71 Aligned_cols=153 Identities=10% Similarity=-0.003 Sum_probs=105.6
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeE
Q 010037 287 ILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (519)
Q Consensus 287 I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 366 (519)
...|.|+ ++.++.+.+.+|.|+++|+.+++.+..+ ....
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~--------------------------------------- 95 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN--------------------------------------- 95 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT---------------------------------------
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC---------------------------------------
Confidence 4788887 4677788888999999999998865443 2110
Q ss_pred EEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEE
Q 010037 367 VVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFIS 446 (519)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~s 446 (519)
...-.++...+...++.-.++.+.+||..+.+.+.++.....-..++ + ++..|+.
T Consensus 96 ----------------------~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~-Dg~~L~v 150 (268)
T 3nok_A 96 ----------------------IFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--Y-WNGKLVR 150 (268)
T ss_dssp ----------------------CCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--E-ETTEEEE
T ss_pred ----------------------cceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--c-CCCEEEE
Confidence 00112333333344445578999999999999999998544434444 4 5677777
Q ss_pred EeCCCeEEEEEcCCCcEEeecc---CC---CceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 447 GSIDGKVRIWEVRRCQVVDYTD---IR---EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 447 gs~Dg~V~iwd~~~~~~~~~~~---~~---~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+..+++|.++|..+.+++.... .. ..++.+.|. +|+..+..-.+..|.+.|.+++++..
T Consensus 151 SdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 151 SDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEE
T ss_pred ECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEE
Confidence 6778999999999988774322 22 235667776 77655545467899999999998764
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.03 E-value=0.0041 Score=58.61 Aligned_cols=220 Identities=9% Similarity=-0.012 Sum_probs=120.2
Q ss_pred cccceeecCCCCeEE-eeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEE-EEeCCCcEEEEecc
Q 010037 237 RHGSATLKPGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLA-SGGEDGTVRVWKVI 314 (519)
Q Consensus 237 ~~~~~~~sp~g~~la-sgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~La-Sgs~Dg~I~iWd~~ 314 (519)
....++++|++..|. +-...+.|.+++....... ..+.........|++++++..|+ +-...+.|.++++.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-------~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~ 109 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-------TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD 109 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-------EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-------EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC
Confidence 344689999765555 4455789999998643211 01112224678999999765554 44556789999986
Q ss_pred cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee-ccCCCeeE
Q 010037 315 EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ-GHSSEVLD 393 (519)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~ 393 (519)
..............+..+.+.+.. ..++...... ....+..+... +.....+. ........
T Consensus 110 g~~~~~~~~~~~~~P~~i~vd~~~-g~lyv~~~~~------------~~~~I~~~~~d-----g~~~~~~~~~~~~~P~g 171 (267)
T 1npe_A 110 GTQRRVLFDTGLVNPRGIVTDPVR-GNLYWTDWNR------------DNPKIETSHMD-----GTNRRILAQDNLGLPNG 171 (267)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTT-TEEEEEECCS------------SSCEEEEEETT-----SCCCEEEECTTCSCEEE
T ss_pred CCCEEEEEECCCCCccEEEEeeCC-CEEEEEECCC------------CCcEEEEEecC-----CCCcEEEEECCCCCCcE
Confidence 433211111111222333333221 1222221110 01122221111 11111111 22345788
Q ss_pred EEEcCCC-eE-EEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCC
Q 010037 394 LSWSKNG-FL-LSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIRE 471 (519)
Q Consensus 394 l~~sp~~-~L-~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~ 471 (519)
+++++++ .| ++-...+.|.++|+........+........|+.. ++.++++....+.|.++|..+++.+.......
T Consensus 172 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~ 249 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK 249 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSS
T ss_pred EEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcccc
Confidence 9999976 44 55556789999999865544444433445666653 34445554466899999999988775443322
Q ss_pred --ceEEEEEeeCCC
Q 010037 472 --IVSAVCYCPDGK 483 (519)
Q Consensus 472 --~V~~v~~spdg~ 483 (519)
....+++.|++.
T Consensus 250 ~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 250 QTRLYGITIALSQC 263 (267)
T ss_dssp CCCCCCEEEECSCC
T ss_pred ccccceeeecCccC
Confidence 467788888764
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.02 E-value=0.00037 Score=65.58 Aligned_cols=173 Identities=9% Similarity=0.019 Sum_probs=113.2
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeec
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLD 320 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~ 320 (519)
+.|+ ++.+..+.+.+|.|+++|...++..... +..+ ----.+++.. ++..+..-.++.+.+||..+.+.+.
T Consensus 60 L~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~------l~~~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 60 LVFH-QGHFFESTGHQGTLRQLSLESAQPVWME------RLGN-IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE------ECTT-CCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEE
T ss_pred EEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE------CCCC-cceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEE
Confidence 5665 3566677778889999999865543221 1111 1112345443 2344445578899999999888765
Q ss_pred eeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCC
Q 010037 321 GFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG 400 (519)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 400 (519)
++... ..-..++ +++
T Consensus 131 ti~~~---------------------------------------------------------------~eGwGLt--~Dg 145 (268)
T 3nok_A 131 TTRYS---------------------------------------------------------------GEGWGLC--YWN 145 (268)
T ss_dssp EEECS---------------------------------------------------------------SCCCCEE--EET
T ss_pred EEeCC---------------------------------------------------------------CceeEEe--cCC
Confidence 55321 1112333 334
Q ss_pred -eEEEEeCCCcEEEEECCCCeEEEEec---CC---CcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccC----
Q 010037 401 -FLLSSSADKTVRLWQVGIDRCLRVFS---HN---NYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI---- 469 (519)
Q Consensus 401 -~L~sgs~Dg~V~lWdl~~~~~~~~~~---h~---~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~---- 469 (519)
.|+.+..++.|.++|..+.+.+..+. +. ..++.+.|. ++.+++....+..|.+.|..+++++.....
T Consensus 146 ~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~ 223 (268)
T 3nok_A 146 GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALT 223 (268)
T ss_dssp TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHH
T ss_pred CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCc
Confidence 66666678999999999999988875 22 245777776 566666655788999999999998853321
Q ss_pred ----------CCceEEEEEeeCCCEEEEEe
Q 010037 470 ----------REIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 470 ----------~~~V~~v~~spdg~~l~sgs 489 (519)
....+.|||+|+++.|++.+
T Consensus 224 ~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 224 RAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp HHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 24678999999887776655
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.01 E-value=0.00049 Score=66.82 Aligned_cols=182 Identities=14% Similarity=0.057 Sum_probs=107.4
Q ss_pred CCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccc
Q 010037 296 GQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFR 375 (519)
Q Consensus 296 g~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 375 (519)
+..|..++.++.|..+|.. ++..............+.... ...++ .++.+..+..++.. .
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~--~g~l~---------------vgt~~~~l~~~d~~-g- 166 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE--DGTIY---------------VGSNDNYLYAINPD-G- 166 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT--TSCEE---------------EECTTSEEEEECTT-S-
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC--CCEEE---------------EEcCCCEEEEECCC-C-
Confidence 4467778889999999987 665544443322222221111 11111 12223344444443 1
Q ss_pred ccccceeEeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEE
Q 010037 376 LLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVR 454 (519)
Q Consensus 376 ~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~ 454 (519)
+.+..+......+.++...+++.|+.++ +.|..|| .+++.+..+. ....+.++...+ ++. +..++.++.|.
T Consensus 167 ---~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-~g~-l~v~t~~~gl~ 238 (330)
T 3hxj_A 167 ---TEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE-DGT-IYVTSLDGHLY 238 (330)
T ss_dssp ---CEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT-TSC-EEEEETTTEEE
T ss_pred ---CEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECC-CCe-EEEEcCCCeEE
Confidence 2223333445567778887788666666 8899999 7776665554 445678888877 554 55567788888
Q ss_pred EEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 455 IWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 455 iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.+|...............+..+...++| .|.+++.+|.|..+|..+..++.
T Consensus 239 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 239 AINPDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINPDGTEKWN 289 (330)
T ss_dssp EECTTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECTTSCEEEE
T ss_pred EECCCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECCCCcEEEE
Confidence 8885433333444333344455665566 47788889899999974333433
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.01 E-value=0.00081 Score=67.00 Aligned_cols=226 Identities=8% Similarity=0.023 Sum_probs=120.8
Q ss_pred CCeEEeeecCCeEEEeeCCccccccccccccc--eeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeec
Q 010037 247 DHELTLGQRMRRVRVHPVKKQSRELSSLYTGQ--EFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDV 324 (519)
Q Consensus 247 g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~--~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~ 324 (519)
+..+++++.++.|..+|...+...-....... .+..+..+ ... +..++.++.++.|..+|..+++.+.....
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~----~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAP----TTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRI 216 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCC----EEE--TTEEEECCTTTEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCc----EEE--CCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 45777788899999999875543211100000 00111111 121 34677788899999999999987766554
Q ss_pred cCCCCce-E-EEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeE
Q 010037 325 QDTDPSC-L-YFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFL 402 (519)
Q Consensus 325 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L 402 (519)
....... + .+.......+. ... ..+..+.++.+..++..... .+.... ......+... ++.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~p~~----~~~-----~v~~~~~~g~l~~~d~~tG~----~~w~~~--~~~~~~~~~~-~~~l 280 (376)
T 3q7m_A 217 SQATGSTEIDRLSDVDTTPVV----VNG-----VVFALAYNGNLTALDLRSGQ----IMWKRE--LGSVNDFIVD-GNRI 280 (376)
T ss_dssp CC-----------CCCCCCEE----ETT-----EEEEECTTSCEEEEETTTCC----EEEEEC--CCCEEEEEEE-TTEE
T ss_pred ccCCCCcccccccccCCCcEE----ECC-----EEEEEecCcEEEEEECCCCc----EEeecc--CCCCCCceEE-CCEE
Confidence 3211000 0 00000000000 000 01111223333333332211 111111 1223334433 4488
Q ss_pred EEEeCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccC-CCceEEEEEe
Q 010037 403 LSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDI-REIVSAVCYC 479 (519)
Q Consensus 403 ~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~-~~~V~~v~~s 479 (519)
+.++.++.|..+|..+++.+.... ....+..... .+..|+.++.+|.|.++|..+++++..... ...+.+....
T Consensus 281 ~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~---~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~ 357 (376)
T 3q7m_A 281 YLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL---YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA 357 (376)
T ss_dssp EEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE
T ss_pred EEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE---ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE
Confidence 888899999999999999876664 1222333333 246788889999999999999998743322 2333221111
Q ss_pred eCCCEEEEEecCCeEEEEE
Q 010037 480 PDGKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 480 pdg~~l~sgs~dg~v~iwd 498 (519)
.+..|++++.+|.|+.|+
T Consensus 358 -~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 358 -ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp -ETTEEEEEBTTSCEEEEE
T ss_pred -ECCEEEEEeCCCEEEEEe
Confidence 245788899999999987
No 247
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.95 E-value=0.014 Score=64.37 Aligned_cols=245 Identities=10% Similarity=0.016 Sum_probs=140.5
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~ 317 (519)
+.++...+++.+. .|+..+-|.+|+..................-....|.++...++|.+.+ |+.+ -|.+|+..++.
T Consensus 217 i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~ 293 (795)
T 4a2l_A 217 IQAILQQSPTRIW-VATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDS 293 (795)
T ss_dssp EEEEEEEETTEEE-EEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTE
T ss_pred eEEEEEcCCCCEE-EEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCe
Confidence 4445556666544 4544444778886543221110000000001235799999998887544 5555 48889987765
Q ss_pred eeceeeccCC-----CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee-------
Q 010037 318 RLDGFDVQDT-----DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ------- 385 (519)
Q Consensus 318 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------- 385 (519)
.......... ......+..+....+.... ..+.+..++..... +..+.
T Consensus 294 ~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt---------------~~~Gl~~~~~~~~~-----~~~~~~~~~~~~ 353 (795)
T 4a2l_A 294 FASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGT---------------YFGGLNYYHPIRNR-----FKNIRNIPYKNS 353 (795)
T ss_dssp EEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEE---------------SSSCEEEECGGGGS-----SEEECCCTTSSS
T ss_pred EEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEE---------------CCCCeEEeCCCccc-----ceEEcCCCCCCC
Confidence 4322111100 0111122222222222211 11122223221110 11111
Q ss_pred ccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec---------CCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 386 GHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS---------HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 386 ~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~---------h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
.....|.++...++|.|..|+.++-|..|+..+++...... ....|.++...+ ++++|..|+.++-|.+|
T Consensus 354 l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~ 432 (795)
T 4a2l_A 354 LSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSIL 432 (795)
T ss_dssp CSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEE
T ss_pred CCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEE
Confidence 12456999999998888889998889999988876544321 135799999987 77756677877789999
Q ss_pred EcCCCcEEeecc-----CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeecc
Q 010037 457 EVRRCQVVDYTD-----IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 457 d~~~~~~~~~~~-----~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~~ 508 (519)
|..+++...+.. ....|.++...++|.+ .+|+.+ -+.+||..+++...+.
T Consensus 433 d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-wigt~~-Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 433 HRNSGQVENFNQRNSQLVNENVYAILPDGEGNL-WLGTLS-ALVRFNPEQRSFTTIE 487 (795)
T ss_dssp ETTTCCEEEECTTTSCCSCSCEEEEEECSSSCE-EEEESS-CEEEEETTTTEEEECC
T ss_pred eCCCCcEEEeecCCCCcCCCeeEEEEECCCCCE-EEEecC-ceeEEeCCCCeEEEcc
Confidence 999887665432 3457899999888874 455554 5888999887765543
No 248
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.91 E-value=0.0015 Score=60.82 Aligned_cols=156 Identities=12% Similarity=0.039 Sum_probs=104.4
Q ss_pred CCEEEEEEccCCCEEEEEeCCC--cEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCC
Q 010037 285 GSILTMKFSLDGQYLASGGEDG--TVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSS 362 (519)
Q Consensus 285 ~~I~~l~fspdg~~LaSgs~Dg--~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 362 (519)
.-...+.|++ +.++.+.+.+| .|+.+|+.+++.+..+......
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~---------------------------------- 65 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY---------------------------------- 65 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC----------------------------------
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc----------------------------------
Confidence 3467899986 66667777754 8999999999876655432110
Q ss_pred CeeEEEeCCccccccccceeEeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCC
Q 010037 363 DLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDN 442 (519)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~ 442 (519)
.--.++...+......-.++.+.+||..+.+.+.++.....=..++ + ++.
T Consensus 66 ---------------------------fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~-dg~ 115 (243)
T 3mbr_X 66 ---------------------------FGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--S-DDS 115 (243)
T ss_dssp ---------------------------CEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--E-CSS
T ss_pred ---------------------------ceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--e-CCC
Confidence 0011222222233445578899999999999999998554434444 5 555
Q ss_pred EEEEEeCCCeEEEEEcCCCcEEeeccC---C---CceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 443 YFISGSIDGKVRIWEVRRCQVVDYTDI---R---EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 443 ~l~sgs~Dg~V~iwd~~~~~~~~~~~~---~---~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.|+.+..+++|.++|..+.+++..... . ..++-+.|. +|+..+..-.+..|.+.|.+++++..
T Consensus 116 ~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 116 HLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp CEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred EEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEE
Confidence 555556688999999999887743222 1 245566665 77655555467899999999998764
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.84 E-value=0.0034 Score=59.03 Aligned_cols=202 Identities=11% Similarity=0.112 Sum_probs=124.2
Q ss_pred ecccceeecCCCCeEE-eeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecc
Q 010037 236 DRHGSATLKPGDHELT-LGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVI 314 (519)
Q Consensus 236 ~~~~~~~~sp~g~~la-sgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~ 314 (519)
+....+++.|++..|+ +...++.|...+.. +. ....+ .+.+ ....-.|++.+++.++++.-.++.+.++++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~-v~~~i----~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD-LIRTI----PLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC-EEEEE----ECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC-EEEEE----ecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3455689999876554 57778888888876 22 12111 1122 2457788999998877776667788888875
Q ss_pred cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEE
Q 010037 315 EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDL 394 (519)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 394 (519)
....+....... .++. ...++...-.|
T Consensus 100 ~~~~i~~~~~~~----------------------------------------------------~~~~-~~~~N~g~EGL 126 (255)
T 3qqz_A 100 PNSEVKILKKIK----------------------------------------------------IPLQ-ESPTNCGFEGL 126 (255)
T ss_dssp TTCCEEEEEEEE----------------------------------------------------CCCS-SCCCSSCCEEE
T ss_pred CCCeeeeeeeec----------------------------------------------------cccc-cccccCCcceE
Confidence 543211100000 0000 01235567899
Q ss_pred EEcCCC-eEEEEeCCCcEEEEECC---CCeEEEEec--------CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc
Q 010037 395 SWSKNG-FLLSSSADKTVRLWQVG---IDRCLRVFS--------HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (519)
Q Consensus 395 ~~sp~~-~L~sgs~Dg~V~lWdl~---~~~~~~~~~--------h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~ 462 (519)
+|+|.+ .|+++.......||.+. ....+..+. +-..+..++++|..+.+++.......|.++|....
T Consensus 127 A~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~- 205 (255)
T 3qqz_A 127 AYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE- 205 (255)
T ss_dssp EEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-
T ss_pred EEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-
Confidence 999988 77777665555666553 111222221 23457899999977888888888899999997754
Q ss_pred EEeeccCC----------CceEEEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 463 VVDYTDIR----------EIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 463 ~~~~~~~~----------~~V~~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
++...... .....|+|.++|++.++ +.-+.++.|.-
T Consensus 206 ~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 206 VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 54322111 25689999999985555 66666666643
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.83 E-value=0.0091 Score=57.60 Aligned_cols=224 Identities=13% Similarity=0.062 Sum_probs=120.8
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC-C-cEEEEecccCe
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED-G-TVRVWKVIEHE 317 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D-g-~I~iWd~~~~~ 317 (519)
.++++|++.++++-...++|..++....... +..-...+..|++.++|+++++.... + .|..++..+++
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~---------~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGNQQI---------HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCCEEE---------EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCceEE---------EEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 4789999987777768899999987642211 11123468899999999966655433 2 36666666665
Q ss_pred eeceeeccCCC-CceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccc--ccc--cccee--EeeccCCC
Q 010037 318 RLDGFDVQDTD-PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVF--RLL--EKPLH--EFQGHSSE 390 (519)
Q Consensus 318 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~--~~~~~--~~~~h~~~ 390 (519)
........... ...+.. .....++.... ..+.++.++.... .+. ...+. .....-..
T Consensus 107 ~~~~~~~~~~~~~~g~~~--~~~~~~~v~d~--------------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITP--LSDTQYLTADS--------------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EEEEEECTTCSCEEEEEE--SSSSEEEEEET--------------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred EEEEEeCCCccccCcccc--cCCCcEEEEEC--------------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 43222221110 011111 11111111111 1222333322110 000 00000 00011123
Q ss_pred eeEEEEcCCC--eEEEEeCCCcEEEEECCC-CeE--EEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 391 VLDLSWSKNG--FLLSSSADKTVRLWQVGI-DRC--LRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 391 V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~-~~~--~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
...| ++++ ++++-...+.|..+++.. ++. ...+........+++++ +++++++....+.|.++|.. ++...
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTI 246 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEE
Confidence 4445 6766 445556678999999874 321 12222223456789999 88888877778899999986 55432
Q ss_pred ---eccCCCceEEEEEe---eCCCEEEEEecCC
Q 010037 466 ---YTDIREIVSAVCYC---PDGKGGIVGTMTG 492 (519)
Q Consensus 466 ---~~~~~~~V~~v~~s---pdg~~l~sgs~dg 492 (519)
....-...++++|. |+++.|++++..+
T Consensus 247 ~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 247 IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 22223568999998 8988877776544
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.77 E-value=0.0033 Score=61.17 Aligned_cols=108 Identities=15% Similarity=0.089 Sum_probs=69.3
Q ss_pred CeeEEEEcCCC-eEEEE-eCCCcEEEEECCCCe--EEEEe-cCCCcEEEEEEeeCCCCEEEEEeC----------CCeEE
Q 010037 390 EVLDLSWSKNG-FLLSS-SADKTVRLWQVGIDR--CLRVF-SHNNYVTSVAFNPVDDNYFISGSI----------DGKVR 454 (519)
Q Consensus 390 ~V~~l~~sp~~-~L~sg-s~Dg~V~lWdl~~~~--~~~~~-~h~~~V~~v~fsp~d~~~l~sgs~----------Dg~V~ 454 (519)
....|+++|++ .|+.+ +..+.|.+|++.... ....+ .... ...+++.+ +++++++... .+.|.
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~ 263 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGI 263 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC-CCCEEEEecCcccccccCCCccEEE
Confidence 34678999998 55554 566899999987521 11122 1233 78899999 8887776654 46788
Q ss_pred EEEcCCCcEEe-eccC----CCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 455 IWEVRRCQVVD-YTDI----REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 455 iwd~~~~~~~~-~~~~----~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
.+|.. ++.+. +... -..++.+++ .+|+++++....+.|.++++..
T Consensus 264 ~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 264 KFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred EECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 88875 55543 3222 234666766 5666666656678899998864
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.74 E-value=0.00069 Score=71.03 Aligned_cols=199 Identities=11% Similarity=0.066 Sum_probs=117.8
Q ss_pred CCCEEEEEeC-CCcEEEEecccCeeeceeeccC-CCCceEEEee-cCCCCeEEeecc-----CCceeeeeeeccCCCeeE
Q 010037 295 DGQYLASGGE-DGTVRVWKVIEHERLDGFDVQD-TDPSCLYFTI-NHLSQLIPIDVD-----KEKIDKTKSLRKSSDLTC 366 (519)
Q Consensus 295 dg~~LaSgs~-Dg~I~iWd~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~ 366 (519)
||++|+.... +..|.+-|+.+.++...+.++. ..+..+.+.. .....+++..-. .... ...........+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~--~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT--NMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS--STTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc--ccccccccCceE
Confidence 7888777655 5569999999999888665543 2234444422 222222222100 0000 000011222233
Q ss_pred EEeCCccccccccceeEeeccCCCeeEEEEcCCC-eEEEEeCC-------------------------------------
Q 010037 367 VVLPPKVFRLLEKPLHEFQGHSSEVLDLSWSKNG-FLLSSSAD------------------------------------- 408 (519)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~D------------------------------------- 408 (519)
.+++...... ...+.-- +....++.+|+| ++++++.+
T Consensus 178 tvID~~t~~v----~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 178 TAVDADKWEV----AWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEETTTTEE----EEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEEECCCCeE----EEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 3344332211 1221111 123456677777 55555533
Q ss_pred -CcEEEEECCC--CeE-EEEecCCCcEEEEEEeeCCCCEEEEEe-CCCeEEEEEcCCCc------------EEeeccCCC
Q 010037 409 -KTVRLWQVGI--DRC-LRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRRCQ------------VVDYTDIRE 471 (519)
Q Consensus 409 -g~V~lWdl~~--~~~-~~~~~h~~~V~~v~fsp~d~~~l~sgs-~Dg~V~iwd~~~~~------------~~~~~~~~~ 471 (519)
+.|.|.|..+ ++. +..+.-.....++.++| |++++++++ .+.+|.++|+.+.+ ++.......
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 2478888887 544 55665455667899999 888777665 57899999999653 344445566
Q ss_pred ceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 472 ~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
....++|+|+|...++.-.|+.|.+||+.+
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 788999999995555667799999999976
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.73 E-value=0.0034 Score=66.63 Aligned_cols=104 Identities=11% Similarity=0.033 Sum_probs=73.4
Q ss_pred eEEEEeCCCcEEEEECCCCeEEEEecCCC--------------cE--------------------------EEEEEeeCC
Q 010037 401 FLLSSSADKTVRLWQVGIDRCLRVFSHNN--------------YV--------------------------TSVAFNPVD 440 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~--------------~V--------------------------~~v~fsp~d 440 (519)
.++.++.+|.+.++|..+++.+..+.... ++ ..++++| +
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~ 396 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-E 396 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-T
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-C
Confidence 36678889999999999999887664211 11 2357788 5
Q ss_pred CCEEEEEe-------------------------------------CCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCC
Q 010037 441 DNYFISGS-------------------------------------IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (519)
Q Consensus 441 ~~~l~sgs-------------------------------------~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~ 483 (519)
..+|++.. .+|.|..||+.+++++-.......+....+...+.
T Consensus 397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg 476 (571)
T 2ad6_A 397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGG 476 (571)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTT
T ss_pred CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCC
Confidence 55555543 35789999999998874333333333334445567
Q ss_pred EEEEEecCCeEEEEECCCCeee
Q 010037 484 GGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 484 ~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
.+++++.||.|+.||.++++++
T Consensus 477 ~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 477 LVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEEcCCCeEEEEECCCCCEE
Confidence 7888999999999999988754
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.69 E-value=0.018 Score=63.62 Aligned_cols=239 Identities=9% Similarity=0.059 Sum_probs=136.6
Q ss_pred cccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 237 RHGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 237 ~~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
.+.++...++|.+. .|+..| |.+|+..................-....|.+|...++|. |..|+.++-|..|+..+.
T Consensus 264 ~i~~i~~d~~g~lW-igt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 264 YIRSLAMDSQNRLW-IGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRN 340 (795)
T ss_dssp BEEEEEECTTSCEE-EEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGG
T ss_pred eEEEEEEcCCCCEE-EEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcc
Confidence 34556667776644 444454 777876543321100000000011346799999999887 556777777889987655
Q ss_pred eeeceeeccC-----CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEee------
Q 010037 317 ERLDGFDVQD-----TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQ------ 385 (519)
Q Consensus 317 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------ 385 (519)
... .+.... .......+..+....+.. ++..+.+..++..... +..+.
T Consensus 341 ~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWi---------------Gt~~~Gl~~~~~~~~~-----~~~~~~~~~~~ 399 (795)
T 4a2l_A 341 RFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWI---------------GTNDGGLNLYNPITQR-----FTSYTLQEDES 399 (795)
T ss_dssp SSE-EECCCTTSSSCSCSSEEEEEECTTSCEEE---------------EESSSCEEEECTTTCC-----EEEECCC----
T ss_pred cce-EEcCCCCCCCCCCCeeEEEEECCCCCEEE---------------EECCCCeEEEcCCCCc-----EEEEecCCCCc
Confidence 422 111100 001111222222222221 1112223333332111 11111
Q ss_pred ---ccCCCeeEEEEcCCCe-EEEEeCCCcEEEEECCCCeEEEEec-----CCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 386 ---GHSSEVLDLSWSKNGF-LLSSSADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 386 ---~h~~~V~~l~~sp~~~-L~sgs~Dg~V~lWdl~~~~~~~~~~-----h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
.....|.++...+++. |..|+.++-|.+||..+++...... ....|.++...+ ++++.+.. . +-|.+|
T Consensus 400 ~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt-~-~Gl~~~ 476 (795)
T 4a2l_A 400 ARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGT-L-SALVRF 476 (795)
T ss_dssp --CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEE-S-SCEEEE
T ss_pred ccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEe-c-CceeEE
Confidence 1245789999988886 9999998889999998877544332 346799999888 67755544 4 458899
Q ss_pred EcCCCcEEeecc-------CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 457 EVRRCQVVDYTD-------IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 457 d~~~~~~~~~~~-------~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
|..+++...+.. ....|.++...++|++. +|+. +-+..||..++++
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 477 NPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLW-IGGE-EGLSVFKQEGLDI 529 (795)
T ss_dssp ETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEE-EEES-SCEEEEEEETTEE
T ss_pred eCCCCeEEEccccccccccCCceEEEEEECCCCCEE-EEeC-CceEEEeCCCCeE
Confidence 998876654322 23578999999998754 4555 4588888877665
No 255
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.67 E-value=0.0042 Score=68.20 Aligned_cols=243 Identities=7% Similarity=0.006 Sum_probs=116.4
Q ss_pred cceeec-CCCCeEEeeec-----CCeEEEeeCCcc-ccccccccccceeecCCCCEEEEEEccCCCEEEEEeCC-----C
Q 010037 239 GSATLK-PGDHELTLGQR-----MRRVRVHPVKKQ-SRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGED-----G 306 (519)
Q Consensus 239 ~~~~~s-p~g~~lasgs~-----dg~I~vw~~~~~-~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~D-----g 306 (519)
...+|+ |||++||.+.. ..+|+++++..+ .. +. ..+.. ....+.|+|||+.|+....| .
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~-----~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IA-----DKVSG---TNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CC-----CCEEE---ECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CC-----ccccC---ceeeEEEecCCCEEEEEEECCCCCCC
Confidence 346899 99999886433 235999999865 31 11 11211 12357899999988777665 2
Q ss_pred cEEEEecccCeeec--eeeccCCC-CceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccc-ee
Q 010037 307 TVRVWKVIEHERLD--GFDVQDTD-PSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKP-LH 382 (519)
Q Consensus 307 ~I~iWd~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~ 382 (519)
.|.++++.++.... .+...... .....++++....++... ......+.+++..... ... +.
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~-------------~~~~~~l~~~d~~~~~--~~~~~~ 312 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ-------------SPETAEVHLLDLRKGN--AHNTLE 312 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE-------------CSSCEEEEEEESSSCT--TCCCEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec-------------CCCCceEEEEECCCCC--CCceeE
Confidence 57778876654221 11111111 112233333222222111 1112333333332210 011 01
Q ss_pred Ee-eccCCCeeEEEEcCCCeE-EEEeCC----CcEEEEECCC-CeEEE-EecCCCcEEEEEEeeCCCCEEEEEeCCCe--
Q 010037 383 EF-QGHSSEVLDLSWSKNGFL-LSSSAD----KTVRLWQVGI-DRCLR-VFSHNNYVTSVAFNPVDDNYFISGSIDGK-- 452 (519)
Q Consensus 383 ~~-~~h~~~V~~l~~sp~~~L-~sgs~D----g~V~lWdl~~-~~~~~-~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~-- 452 (519)
.+ .........+.|+..+.| +.+..+ ..|..+++.+ +.... .+.+...+.--.+.+..+.++++...++.
T Consensus 313 ~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~ 392 (751)
T 2xe4_A 313 IVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTR 392 (751)
T ss_dssp ESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEE
T ss_pred EeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEE
Confidence 12 223345556666555544 444333 3566777765 33333 45554433323344424456666777775
Q ss_pred EEEEEc-------CCCc-EEeecc-CCCceEEEEE----eeCCCE-EEEEecC---CeEEEEECCCCeee
Q 010037 453 VRIWEV-------RRCQ-VVDYTD-IREIVSAVCY----CPDGKG-GIVGTMT---GNCRFYDIKGMQIF 505 (519)
Q Consensus 453 V~iwd~-------~~~~-~~~~~~-~~~~V~~v~~----spdg~~-l~sgs~d---g~v~iwdl~~~~l~ 505 (519)
|.++++ .+++ ...+.- ....+..+.+ ++++.. +++.+.. +.+..+|+.+++..
T Consensus 393 l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~ 462 (751)
T 2xe4_A 393 IWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRT 462 (751)
T ss_dssp EEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEE
T ss_pred EEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 555665 3444 332211 1122333333 346654 3443332 45778888776543
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.60 E-value=0.006 Score=65.87 Aligned_cols=248 Identities=11% Similarity=0.077 Sum_probs=128.7
Q ss_pred ceeecC-CCCeEEeeecCC-----------eEEEeeCCcccccccccccccee-ecCCCCEEEEEEccCCCEEEEEeC-C
Q 010037 240 SATLKP-GDHELTLGQRMR-----------RVRVHPVKKQSRELSSLYTGQEF-LAHEGSILTMKFSLDGQYLASGGE-D 305 (519)
Q Consensus 240 ~~~~sp-~g~~lasgs~dg-----------~I~vw~~~~~~~~~~~~~~~~~l-~~H~~~I~~l~fspdg~~LaSgs~-D 305 (519)
.+++.| ++++++.|+.+. .+.+||......... ..+ ..+.....++++..+++.++.||. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~-----~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR-----TVTVTKHDMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC-----EEEECSCCCSSCEEEECTTSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC-----cccCCCCCCccccccCCCCCCEEEeCCCCC
Confidence 356777 888888876543 578888875543211 112 123333445778889999999984 4
Q ss_pred CcEEEEecccCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcc--ccccc----c
Q 010037 306 GTVRVWKVIEHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKV--FRLLE----K 379 (519)
Q Consensus 306 g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~~~----~ 379 (519)
..+.+||..+++-...-..+.......... .....++.+.-.... ......+.++++.. |.... .
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~-~~dg~iyv~GG~~~~--------~~~~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSAT-MSDGRVFTIGGSWSG--------GVFEKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEE-CTTSCEEEECCCCCS--------SSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred CceEEecCcCCceeECCCCCccccccceEE-ecCCeEEEEeCcccC--------CcccccceEeCCCCCcceeCCCcccc
Confidence 589999998765332211111111111111 111222222210000 00112344444432 22110 1
Q ss_pred ceeEeeccCCCeeEEEEcCCC-eEEEEeC---------CCcEEEEECCCCeEEEEec-C---------CCcEEEEEEeeC
Q 010037 380 PLHEFQGHSSEVLDLSWSKNG-FLLSSSA---------DKTVRLWQVGIDRCLRVFS-H---------NNYVTSVAFNPV 439 (519)
Q Consensus 380 ~~~~~~~h~~~V~~l~~sp~~-~L~sgs~---------Dg~V~lWdl~~~~~~~~~~-h---------~~~V~~v~fsp~ 439 (519)
++... .+. ..+..++ .++.++. ...+..||..+........ + ...-.++.|...
T Consensus 336 p~~~~-~~~-----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~ 409 (656)
T 1k3i_A 336 PMLTA-DKQ-----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV 409 (656)
T ss_dssp GGCCC-CTT-----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETT
T ss_pred ccccc-ccc-----ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCC
Confidence 11110 010 1112233 3344433 3457889998876554433 1 112355666554
Q ss_pred CCCEEEEEeCCC-----------eEEEEEcCCCcEEeec----cCCCceEEEEEeeCCCEEEEEecC-----------Ce
Q 010037 440 DDNYFISGSIDG-----------KVRIWEVRRCQVVDYT----DIREIVSAVCYCPDGKGGIVGTMT-----------GN 493 (519)
Q Consensus 440 d~~~l~sgs~Dg-----------~V~iwd~~~~~~~~~~----~~~~~V~~v~~spdg~~l~sgs~d-----------g~ 493 (519)
++.+++.|+.++ .|.+||..+.+-.... .....-.+++..|+|+++++|+.+ ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 778888887543 6888888876544332 111222345677899999999864 46
Q ss_pred EEEEECCCCeeeec
Q 010037 494 CRFYDIKGMQIFDL 507 (519)
Q Consensus 494 v~iwdl~~~~l~~~ 507 (519)
+.+||..+++-..+
T Consensus 490 v~~ydp~t~~W~~~ 503 (656)
T 1k3i_A 490 PEIYVPEQDTFYKQ 503 (656)
T ss_dssp CEEEEGGGTEEEEC
T ss_pred eEEEcCCCCceeec
Confidence 89999988765443
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.59 E-value=0.0066 Score=64.65 Aligned_cols=57 Identities=14% Similarity=0.029 Sum_probs=40.1
Q ss_pred CCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 449 IDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 449 ~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
.+|.|.-||+.+++++-......++..-.....|.++++++.||.++.||.++++++
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 347899999999988743322222222223346778888999999999999998753
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.56 E-value=0.0028 Score=68.63 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=44.0
Q ss_pred CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 450 DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 450 Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
+|.|..||+.+++++-.......+....+...|.++++++.||.++.||.++++++
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 48899999999998844334444444556667889999999999999999988764
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.55 E-value=0.0051 Score=65.36 Aligned_cols=80 Identities=9% Similarity=0.074 Sum_probs=55.2
Q ss_pred CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceE--EEEEeeCCCE
Q 010037 407 ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVS--AVCYCPDGKG 484 (519)
Q Consensus 407 ~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~--~v~~spdg~~ 484 (519)
.++.|..||+.+++.+-...+...+..-.... .+.+++.|+.||.|+.||.++++++-.......+. -+.|..+|+.
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 36889999999999887766443333322333 46778889999999999999999884333333332 3677788874
Q ss_pred EEE
Q 010037 485 GIV 487 (519)
Q Consensus 485 l~s 487 (519)
.++
T Consensus 543 Yv~ 545 (582)
T 1flg_A 543 YLG 545 (582)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.52 E-value=0.043 Score=60.36 Aligned_cols=247 Identities=10% Similarity=0.010 Sum_probs=133.4
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccc-------cccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSL-------YTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~-------~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
+.++...++|. |..|+..+-|.+++........... ............|.+|...++|. |..|+.++-|..
T Consensus 260 i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~ 337 (781)
T 3v9f_A 260 IFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINF 337 (781)
T ss_dssp EEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEE
T ss_pred EEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEE
Confidence 44555666665 4456664557777765433211000 00000012346799999998887 556777777888
Q ss_pred EecccCeeeceeecc-----C---CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCcccccccccee
Q 010037 311 WKVIEHERLDGFDVQ-----D---TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLH 382 (519)
Q Consensus 311 Wd~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 382 (519)
++..+..... +... . .......+.......+..... ...+..++........- ..
T Consensus 338 ~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~---------------~~Gl~~~~~~~~~~~~~-~~ 400 (781)
T 3v9f_A 338 ISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD---------------GGGINVFENGKRVAIYN-KE 400 (781)
T ss_dssp ECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSCEEEEEB---------------SSCEEEEETTEEEEECC---
T ss_pred eCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCCEEEEeC---------------CCcEEEEECCCCeEEEc-cC
Confidence 8876544221 1110 0 001111122222222221111 11122222221110000 00
Q ss_pred EeeccCCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec---CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcC
Q 010037 383 EFQGHSSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (519)
Q Consensus 383 ~~~~h~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~---h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~ 459 (519)
........|.++...+++.|..|+.++-|..+|..+++...... ....|.++...+ ++. |..|+. +-|.+||..
T Consensus 401 ~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lwigt~-~Gl~~~~~~ 477 (781)
T 3v9f_A 401 NRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKK-IWIGTH-AGVFVIDLA 477 (781)
T ss_dssp ---CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSE-EEEEET-TEEEEEESS
T ss_pred CCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCC-EEEEEC-CceEEEeCC
Confidence 00123467999998888877778887889999988776543321 346799998887 565 444555 568999988
Q ss_pred CCcEEeeccC------CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 460 RCQVVDYTDI------REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 460 ~~~~~~~~~~------~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
+++....... ...|.+++..++|. |.+|+..+-+..||..++++..+
T Consensus 478 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 478 SKKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVRKF 530 (781)
T ss_dssp SSSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTCCEEEEE
T ss_pred CCeEEecccCcccccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEEEc
Confidence 7765433221 36789999999887 45566544477799887766544
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.49 E-value=0.006 Score=66.03 Aligned_cols=82 Identities=6% Similarity=0.123 Sum_probs=58.0
Q ss_pred CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCce--EEEEEeeCCCE
Q 010037 407 ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIV--SAVCYCPDGKG 484 (519)
Q Consensus 407 ~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V--~~v~~spdg~~ 484 (519)
.++.|..||+.+++.+-.+.+...+....+.. .+.+++.|+.|+.|+.||.++++++........+ .-+.+..+|+.
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLST-AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEe-CCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 45889999999999987776555555455555 6788999999999999999999988432222222 33455678864
Q ss_pred -EEEEe
Q 010037 485 -GIVGT 489 (519)
Q Consensus 485 -l~sgs 489 (519)
+++++
T Consensus 515 yva~~~ 520 (668)
T 1kv9_A 515 YVAIMA 520 (668)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 44443
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.48 E-value=0.0025 Score=59.30 Aligned_cols=116 Identities=10% Similarity=-0.041 Sum_probs=83.2
Q ss_pred CCeeEEEEcCCCeEEEEeCC--CcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee
Q 010037 389 SEVLDLSWSKNGFLLSSSAD--KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY 466 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~D--g~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~ 466 (519)
.....+.|+++.++.+.+.+ ..|+.+|+.+++.+....-..........+.++.++...-.++.+.+||..+.+++..
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 45778999873255566664 4899999999999998874444444434442455555666789999999999998854
Q ss_pred ccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 467 TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 467 ~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
......-. .+.+|++.|+++..++.|.++|..+.++..
T Consensus 101 i~~~~~Gw--glt~dg~~L~vSdgs~~l~~iDp~t~~~~~ 138 (243)
T 3mbr_X 101 FRYPGEGW--ALTSDDSHLYMSDGTAVIRKLDPDTLQQVG 138 (243)
T ss_dssp EECSSCCC--EEEECSSCEEEECSSSEEEEECTTTCCEEE
T ss_pred EeCCCCce--EEeeCCCEEEEECCCCeEEEEeCCCCeEEE
Confidence 44433333 444688888888888999999999876643
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.43 E-value=0.01 Score=63.02 Aligned_cols=56 Identities=20% Similarity=0.105 Sum_probs=39.9
Q ss_pred CCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeee
Q 010037 450 DGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 450 Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
+|.|..||+.+++++-.......+..-.....+.++++|+.||.++.||.++++++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 68899999999998733222223322223335678888999999999999988753
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.40 E-value=0.13 Score=51.33 Aligned_cols=233 Identities=7% Similarity=-0.059 Sum_probs=125.7
Q ss_pred ceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEecccCee
Q 010037 240 SATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHER 318 (519)
Q Consensus 240 ~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~~~~~ 318 (519)
|.+..+. .+|+.+. ...|+..++...... .+......+..++|.+.+..| ++-...+.|..+++.....
T Consensus 81 C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~--------~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 150 (386)
T 3v65_B 81 CKALGPE-PVLLFAN-RIDIRQVLPHRSEYT--------LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 150 (386)
T ss_dssp EEECSSC-CEEEEEC-BSCEEEECTTSCCCE--------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE
T ss_pred ECCcccc-ceeEeec-CccceeeccCCCcEE--------EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc
Confidence 3344443 3444433 356777776543211 122233457899999755544 4555678899999876543
Q ss_pred eceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE-eeccCCCeeEEEEc
Q 010037 319 LDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLSWS 397 (519)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~l~~s 397 (519)
...+......+..+++.+.. ..++....... .+.+.+.. +..... +.........|++.
T Consensus 151 ~~~~~~~~~~p~glavd~~~-g~lY~~d~~~~--------------~I~~~~~d-----g~~~~~l~~~~l~~P~giavd 210 (386)
T 3v65_B 151 EEVVSTGLESPGGLAVDWVH-DKLYWTDSGTS--------------RIEVANLD-----GAHRKVLLWQSLEKPRAIALH 210 (386)
T ss_dssp EEEECSSCSCCCCEEEETTT-TEEEEEETTTT--------------EEEECBTT-----SCSCEEEECSSCSCEEEEEEE
T ss_pred EEEEeCCCCCccEEEEEeCC-CeEEEEcCCCC--------------eEEEEeCC-----CCceEEeecCCCCCCcEEEEE
Confidence 33222222233334433222 12222222111 12222111 111111 12233567899999
Q ss_pred CCC-eEE-EEeCC-CcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-eccCCCc
Q 010037 398 KNG-FLL-SSSAD-KTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDIREI 472 (519)
Q Consensus 398 p~~-~L~-sgs~D-g~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~~~~~~ 472 (519)
|.+ .|+ +-... +.|..+++.......... .-...+.|+|+|..+.++++-+..+.|..+|+....... .......
T Consensus 211 p~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~ 290 (386)
T 3v65_B 211 PMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH 290 (386)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSS
T ss_pred cCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCC
Confidence 865 444 44444 678888887554333332 344578999998455555555667889999987543332 2222345
Q ss_pred eEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
...+++ ..+.++++-...+.|..++..+++
T Consensus 291 P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 291 PFAITV-FEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ceEEEE-ECCEEEEeeCCCCeEEEEECCCCc
Confidence 677888 455566666677889999865554
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.37 E-value=0.069 Score=58.68 Aligned_cols=244 Identities=12% Similarity=0.107 Sum_probs=135.1
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCcccccccccccc--ceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEeccc
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTG--QEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIE 315 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~--~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~ 315 (519)
+.++...++|. |-.|+.++-|..++.............. ..-......|.++...++|. |..|+.++-|.+|+..+
T Consensus 315 v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 392 (781)
T 3v9f_A 315 ARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGK 392 (781)
T ss_dssp EEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTE
T ss_pred EEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCC
Confidence 44455666664 5567766667777765432111100000 00011235699999988887 45566666688898765
Q ss_pred CeeeceeeccC-CCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe---eccCCCe
Q 010037 316 HERLDGFDVQD-TDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF---QGHSSEV 391 (519)
Q Consensus 316 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~V 391 (519)
+.......... .......+.......+.. ++....+..++..... +..+ ......|
T Consensus 393 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi---------------gt~~~Gl~~~~~~~~~-----~~~~~~~~~~~~~v 452 (781)
T 3v9f_A 393 RVAIYNKENRELLSNSVLCSLKDSEGNLWF---------------GTYLGNISYYNTRLKK-----FQIIELEKNELLDV 452 (781)
T ss_dssp EEEECC-----CCCSBEEEEEECTTSCEEE---------------EETTEEEEEECSSSCE-----EEECCSTTTCCCCE
T ss_pred CeEEEccCCCCCCCcceEEEEECCCCCEEE---------------EeccCCEEEEcCCCCc-----EEEeccCCCCCCeE
Confidence 54322110000 001111111121122211 1112233334332211 1111 1134678
Q ss_pred eEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec-C-----CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 392 LDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-H-----NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 392 ~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~-h-----~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
.++...+++.|..|+. +-|..||..+++...... . ...|.++...+ ++.+.+ |+.++-|..||..+++...
T Consensus 453 ~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWi-gt~~~Gl~~~~~~~~~~~~ 529 (781)
T 3v9f_A 453 RVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWI-GTFGGGVGIYTPDMQLVRK 529 (781)
T ss_dssp EEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEE-EESSSCEEEECTTCCEEEE
T ss_pred EEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEE-EEcCCCEEEEeCCCCeEEE
Confidence 9999988887777777 568999988776544332 1 46799999888 676555 4543447789988776655
Q ss_pred ecc----CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 466 YTD----IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 466 ~~~----~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
+.. ....|.++...++|.+ ..|+.+|.+..||..++++..+
T Consensus 530 ~~~~~~l~~~~i~~i~~d~~g~l-Wi~T~~Glv~~~d~~~~~~~~~ 574 (781)
T 3v9f_A 530 FNQYEGFCSNTINQIYRSSKGQM-WLATGEGLVCFPSARNFDYQVF 574 (781)
T ss_dssp ECTTTTCSCSCEEEEEECTTSCE-EEEETTEEEEESCTTTCCCEEE
T ss_pred ccCCCCCCCCeeEEEEECCCCCE-EEEECCCceEEECCCCCcEEEc
Confidence 432 2456889999888874 5555577658899887765543
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.37 E-value=0.08 Score=51.82 Aligned_cols=111 Identities=15% Similarity=0.274 Sum_probs=81.7
Q ss_pred CCeeEEEE--cCC-C--eEEEEeCCCcEEEEEC-------CCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 389 SEVLDLSW--SKN-G--FLLSSSADKTVRLWQV-------GIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 389 ~~V~~l~~--sp~-~--~L~sgs~Dg~V~lWdl-------~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
..+..+++ +|. + +++....++.+..|++ .+.+.++.|.....+-.++..+ ....|+.+-.+.-|..+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd-~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADD-EYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEET-TTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcC-CCCeEEEecccceEEEE
Confidence 55666777 664 4 6888889999999998 2446778888888899999998 77888899988777777
Q ss_pred EcC-----CCcEEeecc---CCCceEEEEE--eeCCC-EEEEEe-cCCeEEEEECC
Q 010037 457 EVR-----RCQVVDYTD---IREIVSAVCY--CPDGK-GGIVGT-MTGNCRFYDIK 500 (519)
Q Consensus 457 d~~-----~~~~~~~~~---~~~~V~~v~~--spdg~-~l~sgs-~dg~v~iwdl~ 500 (519)
+.+ +.+++.... ....+..|++ .++|+ +|++++ .++...+||..
T Consensus 207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 755 345554332 2346888887 45666 566666 56789999996
No 267
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.36 E-value=0.011 Score=57.43 Aligned_cols=110 Identities=11% Similarity=0.091 Sum_probs=80.2
Q ss_pred eeEEEE---cCCC-eEEEEe-------------CCCcEEEEECC---CCeEEEEecC-------------C-CcEEEEEE
Q 010037 391 VLDLSW---SKNG-FLLSSS-------------ADKTVRLWQVG---IDRCLRVFSH-------------N-NYVTSVAF 436 (519)
Q Consensus 391 V~~l~~---sp~~-~L~sgs-------------~Dg~V~lWdl~---~~~~~~~~~h-------------~-~~V~~v~f 436 (519)
+..|.| .|++ ++++.. .+..|..||+. +++.+..... . ...+.++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 467888 5778 444332 26779999999 7776655531 1 25889999
Q ss_pred eeCCCCEEEEEeCC-CeEEEEEcCCCcEEeec------cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 437 NPVDDNYFISGSID-GKVRIWEVRRCQVVDYT------DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 437 sp~d~~~l~sgs~D-g~V~iwd~~~~~~~~~~------~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
.+ +|+..++++.. +.|...+........+. ......+.|+++|+|+.|++....|.+..+|+..
T Consensus 145 D~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 145 DR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 99 99999999988 88888877755444221 1122367999999999999987799999999874
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.32 E-value=0.0036 Score=68.74 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=66.6
Q ss_pred eEEEEcCCC-eEEEEeCC-----CcEEEEECCCCeE--EEEe--cCCCcEEEEEEeeCCCCEEEEEeC---CCeEEEEEc
Q 010037 392 LDLSWSKNG-FLLSSSAD-----KTVRLWQVGIDRC--LRVF--SHNNYVTSVAFNPVDDNYFISGSI---DGKVRIWEV 458 (519)
Q Consensus 392 ~~l~~sp~~-~L~sgs~D-----g~V~lWdl~~~~~--~~~~--~h~~~V~~v~fsp~d~~~l~sgs~---Dg~V~iwd~ 458 (519)
..++|+|++ .|+....| ..|.++++.++.. ...+ ........+.|+| ++++|+..+. ...|+++|+
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEES
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEEC
Confidence 467899998 56555544 3688889887642 2333 3445677899999 8988876653 346888999
Q ss_pred CCC--cE--Eeec-cCCCceEEEEEeeCCCEEEEEec-C----CeEEEEECCC
Q 010037 459 RRC--QV--VDYT-DIREIVSAVCYCPDGKGGIVGTM-T----GNCRFYDIKG 501 (519)
Q Consensus 459 ~~~--~~--~~~~-~~~~~V~~v~~spdg~~l~sgs~-d----g~v~iwdl~~ 501 (519)
.++ +. ..+. ........+.|+. |..|+..+. + ..|..+++.+
T Consensus 303 ~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 303 RKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp SSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 875 23 3222 2334445555443 555554443 3 2577777764
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.0069 Score=61.79 Aligned_cols=112 Identities=8% Similarity=0.131 Sum_probs=70.1
Q ss_pred CCeeEEEEcCCC-eEEEEeCC-C----cEEEEECCCCeE-EEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC
Q 010037 389 SEVLDLSWSKNG-FLLSSSAD-K----TVRLWQVGIDRC-LRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (519)
Q Consensus 389 ~~V~~l~~sp~~-~L~sgs~D-g----~V~lWdl~~~~~-~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~ 461 (519)
.....|+|++++ .|+.+... + .+.+.+...... ...+........++++|.++.++++-..++.|..++...+
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 456788899988 46655542 1 233334322110 1222223345678899956666666667889999999877
Q ss_pred cEEee--ccCCCceEEEEEeeCCCEEEEE-ecCCeEEEEECC
Q 010037 462 QVVDY--TDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIK 500 (519)
Q Consensus 462 ~~~~~--~~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~ 500 (519)
....+ .........++|+|+|++|+++ ...+.|..++..
T Consensus 259 ~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 259 ETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 65322 2223457889999999955554 557789998765
No 270
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.17 E-value=0.019 Score=60.79 Aligned_cols=80 Identities=10% Similarity=0.032 Sum_probs=55.7
Q ss_pred CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCce--EEEEEeeCCCE
Q 010037 407 ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIV--SAVCYCPDGKG 484 (519)
Q Consensus 407 ~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V--~~v~~spdg~~ 484 (519)
.++.|..||+.+++.+-.+.+...+....+.. .+..++.++.||.|+.||.++++++........+ ..+.|..+|+.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 45789999999999888776554444444444 5677788999999999999999988433222222 23446688875
Q ss_pred EEE
Q 010037 485 GIV 487 (519)
Q Consensus 485 l~s 487 (519)
++.
T Consensus 521 yv~ 523 (571)
T 2ad6_A 521 YIG 523 (571)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.17 E-value=0.061 Score=54.66 Aligned_cols=70 Identities=13% Similarity=0.151 Sum_probs=49.6
Q ss_pred CeeEEEEcC-CC-eEEEEeCCCcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCC-EEEEEeCCCeEEEEEcCC
Q 010037 390 EVLDLSWSK-NG-FLLSSSADKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVRR 460 (519)
Q Consensus 390 ~V~~l~~sp-~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~-~l~sgs~Dg~V~iwd~~~ 460 (519)
....++++| ++ ++++-..++.|..++..++.....+. .....+.|+|+| +++ ++++-...+.|..++...
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p-dG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP-SGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC-CCCEEEEEECCCCEEEEEeCCc
Confidence 356788999 66 44555567889999998776533333 334578999999 888 455555678999988763
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.15 E-value=0.22 Score=48.89 Aligned_cols=235 Identities=7% Similarity=-0.057 Sum_probs=124.2
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEecccC
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~~~ 316 (519)
..|.+..+.. +|+.+. ...|+..+....... .+......+..++|++....| ++-...+.|..+++...
T Consensus 36 ~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~--------~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 36 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYT--------LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp SCEEESSSCC-EEEEEC-BSCEEEECTTSCCEE--------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CcccccccCc-eeEeec-ccceEEEeCCCCeeE--------EeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCC
Confidence 3444555533 444333 344666666532211 122233457899999765555 44456788988988765
Q ss_pred eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE-eeccCCCeeEEE
Q 010037 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLS 395 (519)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~l~ 395 (519)
.....+......+..+++.+.. ..++....... .+.+.+.. +..... +.........|+
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~-g~ly~~d~~~~--------------~I~~~~~d-----G~~~~~l~~~~l~~P~~ia 165 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVH-DKLYWTDSGTS--------------RIEVANLD-----GAHRKVLLWQSLEKPRAIA 165 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTT-TEEEEEETTTT--------------EEEEEETT-----SCSCEEEECTTCSCEEEEE
T ss_pred CceEEEeCCCCCccEEEEecCC-CeEEEEcCCCC--------------eEEEEcCC-----CCceEEEEeCCCCCcceEE
Confidence 4332222222233344433222 12222222111 11111111 111111 122334578999
Q ss_pred EcCCC--eEEEEeCC-CcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe-eccCC
Q 010037 396 WSKNG--FLLSSSAD-KTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD-YTDIR 470 (519)
Q Consensus 396 ~sp~~--~L~sgs~D-g~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~-~~~~~ 470 (519)
+.|.+ ++++-... +.|..+++.......... .-...+.|+|+|.++.++++-...+.|..+|+....... .....
T Consensus 166 vdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~ 245 (349)
T 3v64_C 166 LHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGL 245 (349)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred EecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCC
Confidence 99855 44444444 788888887543332222 344578999998445555555567889999987643322 22223
Q ss_pred CceEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 471 ~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
.....+++ ..+.++++-...+.|..++..+++
T Consensus 246 ~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 246 PHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp SSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCceEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 45677888 455555666667889888855544
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.99 E-value=0.062 Score=54.67 Aligned_cols=116 Identities=4% Similarity=-0.081 Sum_probs=73.1
Q ss_pred CCeeEEEEcC-CCeEE-EEeCCCcEEEEECCCCeEEE-Eec--CCCcEEEEEEeeCCCC-EEEEEeCCCeEEEEEcC--C
Q 010037 389 SEVLDLSWSK-NGFLL-SSSADKTVRLWQVGIDRCLR-VFS--HNNYVTSVAFNPVDDN-YFISGSIDGKVRIWEVR--R 460 (519)
Q Consensus 389 ~~V~~l~~sp-~~~L~-sgs~Dg~V~lWdl~~~~~~~-~~~--h~~~V~~v~fsp~d~~-~l~sgs~Dg~V~iwd~~--~ 460 (519)
.....++++| ++.|+ +-..++.|+.+|..++.... .+. ....-..|+|+| +++ ++++-...+.|+.++.. +
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp-dG~~LYvad~~~~~I~~~~~d~~~ 306 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP-TGDWAYIIYNGKHCIYRVDYNRET 306 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT-TSSEEEEEETTTTEEEEEEBCTTT
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC-CCCEEEEEeCCCCEEEEEeCCCCC
Confidence 3456788899 66554 44567789999998776622 222 223345799999 887 45555567899998865 2
Q ss_pred CcEE---eecc---------------CCCceEEEEE---------eeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 461 CQVV---DYTD---------------IREIVSAVCY---------CPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 461 ~~~~---~~~~---------------~~~~V~~v~~---------spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+... .+.+ .-.....+++ .++|.++++-...+.|+.++. ++.+..
T Consensus 307 ~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t 378 (433)
T 4hw6_A 307 GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTT 378 (433)
T ss_dssp CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEE
T ss_pred cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEE
Confidence 3211 1111 1123567888 677776666666778999885 455443
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.98 E-value=0.12 Score=49.51 Aligned_cols=109 Identities=13% Similarity=0.104 Sum_probs=65.9
Q ss_pred CeeEEEEcCCC-eEEEEeC-CC-cEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc--
Q 010037 390 EVLDLSWSKNG-FLLSSSA-DK-TVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ-- 462 (519)
Q Consensus 390 ~V~~l~~sp~~-~L~sgs~-Dg-~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~-- 462 (519)
.+..+++.+++ ++++... ++ .|..+|..+++...... .......++..+ ++..+++-..++.|.++|..+++
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEe
Confidence 46788999998 4444333 22 46677777777654333 233345566555 45555555568899999987652
Q ss_pred EEee-------c--cCCCceEEEEEeeCCCEEEEE-ecCCeEEEEECCC
Q 010037 463 VVDY-------T--DIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIKG 501 (519)
Q Consensus 463 ~~~~-------~--~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~~ 501 (519)
+... . ..-...+.+ +|+++.|+++ ...+.|..|++..
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 2211 0 111234555 8898766655 4567899999874
No 275
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.97 E-value=0.065 Score=56.92 Aligned_cols=78 Identities=10% Similarity=0.058 Sum_probs=52.7
Q ss_pred CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCC--CceEEEEEeeCCCE
Q 010037 407 ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIR--EIVSAVCYCPDGKG 484 (519)
Q Consensus 407 ~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~--~~V~~v~~spdg~~ 484 (519)
.++.|..||+.+++.+-...+...+..-.+.. .+.+++.++.|+.|+.||.++++++-..... ....-+.|..+|+.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMAT-AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEe-cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 45789999999999887775433332222223 5677888999999999999999988322222 22233567788864
Q ss_pred E
Q 010037 485 G 485 (519)
Q Consensus 485 l 485 (519)
.
T Consensus 530 y 530 (599)
T 1w6s_A 530 Y 530 (599)
T ss_dssp E
T ss_pred E
Confidence 3
No 276
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.96 E-value=0.093 Score=51.07 Aligned_cols=108 Identities=9% Similarity=0.135 Sum_probs=66.8
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec-----CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc
Q 010037 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (519)
Q Consensus 388 ~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~-----h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~ 462 (519)
...+..+.+.+++.++.++.+|.+++.+...++.-..+. +...+.+|.+.| ++.+++++. +|.| ++....++
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL-LCSQDGGQ 280 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE-EEESSTTS
T ss_pred CCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeE-EEeCCCCc
Confidence 345677888888866666778888776533233222222 234589999998 677776654 6766 34444443
Q ss_pred EEe-ec---cCCCceEEEEEeeCCCEEEEEecCCeEEEEEC
Q 010037 463 VVD-YT---DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDI 499 (519)
Q Consensus 463 ~~~-~~---~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl 499 (519)
.-. .. .....+.++.|.+++. +++++.+|.|.-++-
T Consensus 281 tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 281 TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 322 11 2345678899986665 666677898776653
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.92 E-value=0.33 Score=46.94 Aligned_cols=197 Identities=5% Similarity=-0.088 Sum_probs=112.4
Q ss_pred cceeecCCCCeE-EeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC-CCEEEEEeCCCcEEEEecccC
Q 010037 239 GSATLKPGDHEL-TLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD-GQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 239 ~~~~~sp~g~~l-asgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd-g~~LaSgs~Dg~I~iWd~~~~ 316 (519)
..++|++.+..| .+-...+.|..++........ ..+...-.....+++.+. +.++++-...+.|.++++...
T Consensus 38 ~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~------~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 38 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ------NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC------EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE------EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 357888855444 455566888888876442110 011222234567888864 444455555667777776432
Q ss_pred eeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEE
Q 010037 317 ERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (519)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 396 (519)
... .+ +.........+++
T Consensus 112 ~~~-~l-------------------------------------------------------------~~~~~~~P~giav 129 (318)
T 3sov_A 112 LRK-VL-------------------------------------------------------------FWQELDQPRAIAL 129 (318)
T ss_dssp SCE-EE-------------------------------------------------------------ECSSCSSEEEEEE
T ss_pred cEE-EE-------------------------------------------------------------EeCCCCCccEEEE
Confidence 110 00 0011234567888
Q ss_pred cCCC-eEEEEe--CCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee-ccCCC
Q 010037 397 SKNG-FLLSSS--ADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY-TDIRE 471 (519)
Q Consensus 397 sp~~-~L~sgs--~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~-~~~~~ 471 (519)
.|.+ .|+.+. ..+.|...++.......... .-...+.|+|+|.++.++.+=+..+.|..+|+.......+ .....
T Consensus 130 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~ 209 (318)
T 3sov_A 130 DPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP 209 (318)
T ss_dssp EGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCS
T ss_pred eCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCC
Confidence 8754 544443 35678888876443322222 3345789999994444555555678999999875433222 22334
Q ss_pred ceEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 472 IVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 472 ~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
....+++. .+.++++-...+.|..++..+++.
T Consensus 210 ~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 210 HPFALTLF-EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CceEEEEe-CCEEEEEecCCCeEEEEECCCCCc
Confidence 56677775 334555655678899999876653
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.89 E-value=0.13 Score=49.90 Aligned_cols=210 Identities=8% Similarity=0.034 Sum_probs=115.8
Q ss_pred ceeecCCCCeEEeee-cCCeEEEeeCCccccccccccccceeec-CCCCEEEEEE---ccCCCEEEEEeC----------
Q 010037 240 SATLKPGDHELTLGQ-RMRRVRVHPVKKQSRELSSLYTGQEFLA-HEGSILTMKF---SLDGQYLASGGE---------- 304 (519)
Q Consensus 240 ~~~~sp~g~~lasgs-~dg~I~vw~~~~~~~~~~~~~~~~~l~~-H~~~I~~l~f---spdg~~LaSgs~---------- 304 (519)
+.+|++....+..++ ..++|..|+..........+... ...+ ....+..|.| .|+++++++...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~-s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGA-SSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTT-CCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCc-cccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 368888666666665 78999999987433211111000 0001 0113578999 688777775431
Q ss_pred ---CCcEEEEecc---cCeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc
Q 010037 305 ---DGTVRVWKVI---EHERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (519)
Q Consensus 305 ---Dg~I~iWd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 378 (519)
+..|..+|+. +++......+... .
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~-------------------------------------------------~- 125 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKV-------------------------------------------------Q- 125 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHH-------------------------------------------------H-
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccc-------------------------------------------------c-
Confidence 5667778876 5543222211000 0
Q ss_pred cceeEeec-cCCCeeEEEEcCCC-eEEEEeCC-CcEEEEECCCCeEEEEec------CCCcEEEEEEeeCCCCEEEEEeC
Q 010037 379 KPLHEFQG-HSSEVLDLSWSKNG-FLLSSSAD-KTVRLWQVGIDRCLRVFS------HNNYVTSVAFNPVDDNYFISGSI 449 (519)
Q Consensus 379 ~~~~~~~~-h~~~V~~l~~sp~~-~L~sgs~D-g~V~lWdl~~~~~~~~~~------h~~~V~~v~fsp~d~~~l~sgs~ 449 (519)
.....+.+ -.....+|+..++| ..++++.- +.|...+.........+. .....+.|+++| +++.|++...
T Consensus 126 ~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~ 204 (334)
T 2p9w_A 126 DEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGG 204 (334)
T ss_dssp HHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESS
T ss_pred ccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeC-CCCEEEEEcC
Confidence 00000001 11247788889988 66667766 776666655442222211 122367999999 8888888777
Q ss_pred CCeEEEEEcCCCcE--Eeec--c---CCCceEEE-EEeeCCCEEEE-EecCCeEEEEECCC
Q 010037 450 DGKVRIWEVRRCQV--VDYT--D---IREIVSAV-CYCPDGKGGIV-GTMTGNCRFYDIKG 501 (519)
Q Consensus 450 Dg~V~iwd~~~~~~--~~~~--~---~~~~V~~v-~~spdg~~l~s-gs~dg~v~iwdl~~ 501 (519)
.|.|..+|+.+... +... + .-.....+ .--.+|+.|++ ....+.+.+.+...
T Consensus 205 ~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 205 PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 99999999985433 3222 2 11223443 44458887444 44566666665544
No 279
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.87 E-value=0.35 Score=47.51 Aligned_cols=240 Identities=15% Similarity=0.105 Sum_probs=114.4
Q ss_pred cceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC---CCEEEEEeC-C-----CcEE
Q 010037 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD---GQYLASGGE-D-----GTVR 309 (519)
Q Consensus 239 ~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd---g~~LaSgs~-D-----g~I~ 309 (519)
..++|.|+|.++++ ...|.|++++ ......+.... .+.........|+|+|+ +.+|..+.. . ..|.
T Consensus 34 ~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~---v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 34 WALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELS---VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp EEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred eEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecce---EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 35899999985555 5669999998 32111111110 11222456889999998 554544432 2 5677
Q ss_pred EEecccCee------eceeec---cCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc--
Q 010037 310 VWKVIEHER------LDGFDV---QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE-- 378 (519)
Q Consensus 310 iWd~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-- 378 (519)
.++...+.. +..+.. .......+.+.++. .++....+...... ..-.....+.+..+++...-...
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG--~Lyv~~G~~~~~~~-~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG--MLYVTTGEVYEREL-AQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS--CEEEECCCTTCGGG-GGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC--CEEEEECCCCCCcc-ccCCCCCceEEEEEcCCCCCCCCCc
Confidence 777654311 111110 01122344444433 23322211110000 00001122344444433100000
Q ss_pred -------cceeEeeccCCCeeEEEEcC-CCeEEEEe-CCCcE------EEEECCCC------------------eEEEEe
Q 010037 379 -------KPLHEFQGHSSEVLDLSWSK-NGFLLSSS-ADKTV------RLWQVGID------------------RCLRVF 425 (519)
Q Consensus 379 -------~~~~~~~~h~~~V~~l~~sp-~~~L~sgs-~Dg~V------~lWdl~~~------------------~~~~~~ 425 (519)
.......+| .....++|+| ++.|+++. ....+ .|.-+..+ .++..+
T Consensus 186 f~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 186 FLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred ccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 011111233 3367899999 56444432 22221 12222222 122333
Q ss_pred cCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc-------EEeeccCCCceEEEEEeeCCCEEEEEe
Q 010037 426 SHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ-------VVDYTDIREIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 426 ~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~-------~~~~~~~~~~V~~v~~spdg~~l~sgs 489 (519)
.+......++| . ++.++++....+.|...++.... ...+......+..+++.|||.++++..
T Consensus 265 ~~~~ap~G~~~-~-~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQGFPPGNLAF-F-RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTCCCEEEEEE-E-TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCCcceEE-E-CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 33445677888 3 67777776667788888776432 122323345789999999998766654
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.85 E-value=0.047 Score=58.75 Aligned_cols=234 Identities=12% Similarity=0.049 Sum_probs=119.2
Q ss_pred eeecCCCCeEEeeec-CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEe-CC-----CcEEEEec
Q 010037 241 ATLKPGDHELTLGQR-MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGG-ED-----GTVRVWKV 313 (519)
Q Consensus 241 ~~~sp~g~~lasgs~-dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs-~D-----g~I~iWd~ 313 (519)
+++.+++.+++.|+. +..+.+||.......... .+.... .-.++...++|+.++.|| .+ ..+.+||.
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~-----~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP-----DMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC-----CCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECC-----CCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 567789999999874 568999998754432111 111111 113455667999999998 44 56899999
Q ss_pred ccCeeece-----eeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeec--
Q 010037 314 IEHERLDG-----FDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQG-- 386 (519)
Q Consensus 314 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-- 386 (519)
.+++-... .......... .......++.+....... ........+..+++...... .+......
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~---~~~~~~~iyv~Gg~~g~~-----~~~~~~~~v~~yd~~~~~w~-~~~~~~~~~~ 392 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQG---LYRSDNHAWLFGWKKGSV-----FQAGPSTAMNWYYTSGSGDV-KSAGKRQSNR 392 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTG---GGTTTCSCCEEECGGGCE-----EECCSSSEEEEEECSTTCEE-EEEEECEETT
T ss_pred CCCcceeCCCccccccccccccc---eeecCCceEEEECCCCcE-----EEecCccceeeeecCCccee-ecCCcccccc
Confidence 77653211 0000000000 000111111211111110 00111123333333221110 01111000
Q ss_pred ----cCCCeeEEEEcC-CC-eEEEEeCCC-----------cEEEEECCCCeEEEEe--c--CCCcEEEEEEeeCCCCEEE
Q 010037 387 ----HSSEVLDLSWSK-NG-FLLSSSADK-----------TVRLWQVGIDRCLRVF--S--HNNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 387 ----h~~~V~~l~~sp-~~-~L~sgs~Dg-----------~V~lWdl~~~~~~~~~--~--h~~~V~~v~fsp~d~~~l~ 445 (519)
....-.++.+.. ++ .++.|+.++ .|.+||..+....... . ....-.+.+..| ++.+++
T Consensus 393 ~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~-~g~i~v 471 (656)
T 1k3i_A 393 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLP-DGSTFI 471 (656)
T ss_dssp EECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECT-TSCEEE
T ss_pred ccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECC-CCCEEE
Confidence 011223344433 45 666666432 6888998888776554 2 222234455667 899999
Q ss_pred EEeCC-----------CeEEEEEcCCCcEEee---ccCCCceEEEEEeeCCCEEEEEec
Q 010037 446 SGSID-----------GKVRIWEVRRCQVVDY---TDIREIVSAVCYCPDGKGGIVGTM 490 (519)
Q Consensus 446 sgs~D-----------g~V~iwd~~~~~~~~~---~~~~~~V~~v~~spdg~~l~sgs~ 490 (519)
.|+.+ ..+.+||..+.+-... ........+..+.|||+.++.|+.
T Consensus 472 ~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 472 TGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 98854 4689999987654322 222233345667799999999885
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.66 E-value=0.44 Score=52.26 Aligned_cols=117 Identities=9% Similarity=-0.045 Sum_probs=78.3
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCC-CeEEEEEcCCCcEE
Q 010037 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID-GKVRIWEVRRCQVV 464 (519)
Q Consensus 389 ~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~D-g~V~iwd~~~~~~~ 464 (519)
.....|++.+.+ ++++-...+.|.+.++........+. .-.....|+++|..+.++++-... +.|.+.++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 345677777655 55566677899999998665544443 445689999999444444443333 78999998766554
Q ss_pred eecc-CCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCCeee
Q 010037 465 DYTD-IREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGMQIF 505 (519)
Q Consensus 465 ~~~~-~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~~l~ 505 (519)
.+.. .-...+.|++.+.+..|+.+. ..+.|..+++.+....
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~ 593 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 593 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE
Confidence 3332 335688999998777666664 4567999998765443
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.58 E-value=0.58 Score=45.06 Aligned_cols=218 Identities=8% Similarity=0.006 Sum_probs=115.1
Q ss_pred CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEecccC---eeece-eeccCCCCce
Q 010037 257 RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEH---ERLDG-FDVQDTDPSC 331 (519)
Q Consensus 257 g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~~~---~~~~~-~~~~~~~~~~ 331 (519)
..|+..++...... .+......+..++|++.+..| ++-..++.|..+++... ..... +......+..
T Consensus 10 ~~I~~i~~~~~~~~--------~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT--------SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEEETTSCCCE--------EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCcceE--------ehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 45777777643321 112234567899999866544 45555688999988651 11111 1111122333
Q ss_pred EEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE-eeccCCCeeEEEEcCCC-eEEEEeC-C
Q 010037 332 LYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLSWSKNG-FLLSSSA-D 408 (519)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~-~L~sgs~-D 408 (519)
+++.... ..++....... .+.+++.. +..... +.........+++.|.+ .|+.+.. .
T Consensus 82 lavd~~~-~~ly~~d~~~~--------------~I~~~~~~-----g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~ 141 (316)
T 1ijq_A 82 LAVDWIH-SNIYWTDSVLG--------------TVSVADTK-----GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 141 (316)
T ss_dssp EEEETTT-TEEEEEETTTT--------------EEEEEETT-----SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS
T ss_pred EEEeecC-CeEEEEECCCC--------------EEEEEeCC-----CCceEEEEECCCCCcceEEeCCCCCEEEEEccCC
Confidence 4333221 12222222211 22222111 111111 12233467899999855 5544443 3
Q ss_pred -CcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeec---cCCCceEEEEEeeCCC
Q 010037 409 -KTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYT---DIREIVSAVCYCPDGK 483 (519)
Q Consensus 409 -g~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~---~~~~~V~~v~~spdg~ 483 (519)
+.|...++.......... .-...+.|+++|.++.++++-+..+.|..+|+.......+. ........+++. .+.
T Consensus 142 ~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ 220 (316)
T 1ijq_A 142 PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDK 220 (316)
T ss_dssp SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTE
T ss_pred CCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCE
Confidence 678888886543332222 34568899999934444455556779999999754332221 122345778884 455
Q ss_pred EEEEEecCCeEEEEECCCCe
Q 010037 484 GGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 484 ~l~sgs~dg~v~iwdl~~~~ 503 (519)
++++-...+.|..++..+++
T Consensus 221 ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 221 VFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETTTTEEEEEETTTCC
T ss_pred EEEEECCCCeEEEEeCCCCc
Confidence 56666667889999986654
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.52 E-value=0.78 Score=45.86 Aligned_cols=220 Identities=8% Similarity=-0.019 Sum_probs=116.1
Q ss_pred cCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEecccCe----eeceeeccCCCC
Q 010037 255 RMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHE----RLDGFDVQDTDP 329 (519)
Q Consensus 255 ~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~~~~----~~~~~~~~~~~~ 329 (519)
....|+..++...... .+......+..|+|++.+..| ++-...+.|+.+++.... ....+......+
T Consensus 90 ~~~~I~~i~l~~~~~~--------~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYT--------SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp ETTEEEEECTTSCSCE--------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ccceeEEEccCCccee--------EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 3467887777643221 123345678899999865555 444456788888876522 111111111122
Q ss_pred ceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeE-eeccCCCeeEEEEcCCC-eEEEEe-
Q 010037 330 SCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHE-FQGHSSEVLDLSWSKNG-FLLSSS- 406 (519)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~-~L~sgs- 406 (519)
..+++.... ..++..... ...+.+.+.. +..... +.........|++.|.+ .|+.+.
T Consensus 162 ~glavD~~~-~~lY~~d~~--------------~~~I~~~~~~-----g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 162 DGLAVDWIH-SNIYWTDSV--------------LGTVSVADTK-----GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp EEEEEETTT-TEEEEEETT--------------TTEEEEECTT-----TCSEEEEEECSSCCEEEEEEETTTTEEEEEEC
T ss_pred ccEEEEecC-CceEEEECC--------------CCeEEEEeCC-----CCceEEEEeCCCCCcceEEEecccCeEEEEeC
Confidence 222222211 112222211 1222222221 111111 22233457899999855 554443
Q ss_pred -CCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeecc---CCCceEEEEEeeC
Q 010037 407 -ADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD---IREIVSAVCYCPD 481 (519)
Q Consensus 407 -~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~---~~~~V~~v~~spd 481 (519)
..+.|...++.......... .-...+.|+++|..+.++++-...+.|..+|+.......+.. .-....++++ ..
T Consensus 222 ~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~ 300 (400)
T 3p5b_L 222 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FE 300 (400)
T ss_dssp SSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ET
T ss_pred CCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eC
Confidence 24788888887654443333 335789999998444444454567889999987654332221 2234556776 34
Q ss_pred CCEEEEEecCCeEEEEECCCCe
Q 010037 482 GKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 482 g~~l~sgs~dg~v~iwdl~~~~ 503 (519)
+.++++-...+.|..+|..+++
T Consensus 301 ~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 301 DKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp TEEEEEESSSCSEEEEESSSCC
T ss_pred CEEEEecCCCCeEEEEEcCCCC
Confidence 4455566667889999966654
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.49 E-value=0.055 Score=55.11 Aligned_cols=112 Identities=10% Similarity=0.132 Sum_probs=65.8
Q ss_pred CCeeEEEEcCCCeEEEEeCC----Cc-EEEEECCCCeE-EEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc
Q 010037 389 SEVLDLSWSKNGFLLSSSAD----KT-VRLWQVGIDRC-LRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~D----g~-V~lWdl~~~~~-~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~ 462 (519)
.....|++++++.|+.+... .. +...+...+.. ...+..-.....++++|.++.++++-..++.|+.+|..++.
T Consensus 182 ~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~ 261 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT 261 (433)
T ss_dssp SCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC
T ss_pred CCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe
Confidence 34678888888843333321 11 22222221110 01222233456788898556666666677899999998776
Q ss_pred EE-ee--ccCCCceEEEEEeeCCCEEEEE-ecCCeEEEEECC
Q 010037 463 VV-DY--TDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIK 500 (519)
Q Consensus 463 ~~-~~--~~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~ 500 (519)
.. .+ .........++|+|+|+.|.++ ...+.|+.+++.
T Consensus 262 ~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 262 LTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 62 22 1222334579999999955555 456789998765
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.46 E-value=0.59 Score=45.16 Aligned_cols=112 Identities=6% Similarity=-0.041 Sum_probs=73.0
Q ss_pred CeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCEEEEEe--CCCeEEEEEcCCCcEE
Q 010037 390 EVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGS--IDGKVRIWEVRRCQVV 464 (519)
Q Consensus 390 ~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs--~Dg~V~iwd~~~~~~~ 464 (519)
....+++.+. + ++++-...+.|.++++........+ ..-.....|+++| .+.+|+... ..+.|...++......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDGSSRF 158 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEG-GGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence 3556777764 4 5555566788999998765433333 3445678999999 444444444 2578888888754332
Q ss_pred ee-ccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCC
Q 010037 465 DY-TDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGM 502 (519)
Q Consensus 465 ~~-~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~ 502 (519)
.+ ...-...+.++++|++..|..+. ..+.|..+|+.+.
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 22 22234568999999777666654 4678999998754
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.43 E-value=0.72 Score=50.55 Aligned_cols=113 Identities=4% Similarity=-0.080 Sum_probs=69.1
Q ss_pred CeeEEEEcCCC-eEEEEe-C-CCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 390 EVLDLSWSKNG-FLLSSS-A-DKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 390 ~V~~l~~sp~~-~L~sgs-~-Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
....|++.|.+ +|+.+. . .+.|...++........+. .-...+.|+++|..+.++++=...+.|...++.......
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 594 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE
Confidence 46788888864 554443 2 3678888887655544444 335789999998445445554556789999987654433
Q ss_pred ecc---CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCe
Q 010037 466 YTD---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 466 ~~~---~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~ 503 (519)
+.. .-....+|++.. +.++++-...+.|...|..+++
T Consensus 595 v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 595 ILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCc
Confidence 221 122345666632 2344444456778888866653
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.38 E-value=0.45 Score=46.80 Aligned_cols=111 Identities=14% Similarity=0.206 Sum_probs=65.8
Q ss_pred CCeeEEEEcCCCeEEEEeC----C------------CcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEe-CCC
Q 010037 389 SEVLDLSWSKNGFLLSSSA----D------------KTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGS-IDG 451 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~----D------------g~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs-~Dg 451 (519)
...+++.+.++|.++.+.. | ..=+||.+..+++......-...+.|+|+| +++.|+.+. ..+
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~sp-Dg~~lYvadt~~~ 243 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISP-DGKYVYIAELLAH 243 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECT-TSSEEEEEEGGGT
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcccCcceECC-CCCEEEEEeCCCC
Confidence 3567788888884333322 1 223344433343333333445679999999 887666554 578
Q ss_pred eEEEEEcCC-CcEE--eeccCCCceEEEEEee-CCCEEEEEecCC-eEEEEECC
Q 010037 452 KVRIWEVRR-CQVV--DYTDIREIVSAVCYCP-DGKGGIVGTMTG-NCRFYDIK 500 (519)
Q Consensus 452 ~V~iwd~~~-~~~~--~~~~~~~~V~~v~~sp-dg~~l~sgs~dg-~v~iwdl~ 500 (519)
.|..|++.. +.+. .........-.+++.+ +|++.+++..+| .|..|+..
T Consensus 244 ~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 244 KIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred eEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 999999864 3332 1223356678899999 598777665443 34444443
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.31 E-value=0.02 Score=62.28 Aligned_cols=115 Identities=4% Similarity=-0.073 Sum_probs=67.3
Q ss_pred eeEEEEcCCC-eEEEEe-C-CCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEee
Q 010037 391 VLDLSWSKNG-FLLSSS-A-DKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDY 466 (519)
Q Consensus 391 V~~l~~sp~~-~L~sgs-~-Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~ 466 (519)
...|++.|.+ +|+.+. . .+.|..+++........+. .-...+.|+|+|..+.++++-+..+.|.++++.......+
T Consensus 498 P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 498 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 577 (699)
T ss_dssp CCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE
T ss_pred cceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE
Confidence 4566777754 333332 2 2677777765433222222 2345678999995566666666778999999975433322
Q ss_pred cc---CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 467 TD---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 467 ~~---~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.. ......+|++..+ .++++....+.|..++..+++...
T Consensus 578 ~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 578 LEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred EecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 21 1123345556443 344555567889999988776544
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.29 E-value=0.11 Score=53.65 Aligned_cols=107 Identities=8% Similarity=0.159 Sum_probs=68.7
Q ss_pred CeeEEEE-------cCCC-eEEEEeCCC-------cEEEEECCC-C--------eEEEEecCCCcEEEEEEeeCCCCEEE
Q 010037 390 EVLDLSW-------SKNG-FLLSSSADK-------TVRLWQVGI-D--------RCLRVFSHNNYVTSVAFNPVDDNYFI 445 (519)
Q Consensus 390 ~V~~l~~-------sp~~-~L~sgs~Dg-------~V~lWdl~~-~--------~~~~~~~h~~~V~~v~fsp~d~~~l~ 445 (519)
....|+| ++++ .|+.+...+ .|.+.+... + ..+..+.| ...++++|.++.+++
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~---p~giavdp~~g~LYv 263 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQ---CNGATIHPINGELYF 263 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESC---CCCEEECTTTCCEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCC---ceEEEEcCCCCeEEE
Confidence 4678888 8888 566665543 255665333 1 22233333 456788996666677
Q ss_pred EEeCCCeEEEEEcC-------CCcE--------------EeeccCCCceEEEEEeeCCCEEEEE-ecCCeEEEEEC
Q 010037 446 SGSIDGKVRIWEVR-------RCQV--------------VDYTDIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDI 499 (519)
Q Consensus 446 sgs~Dg~V~iwd~~-------~~~~--------------~~~~~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl 499 (519)
+-..++.|..+|+. ++.. +.........+.++|+|+|+.|.++ +....|+.++.
T Consensus 264 td~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 264 NSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 77788899999997 5543 1112233456899999999965555 45677888554
No 290
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.26 E-value=0.13 Score=48.15 Aligned_cols=115 Identities=10% Similarity=0.165 Sum_probs=83.5
Q ss_pred eeccCCCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEecC--CCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcC
Q 010037 384 FQGHSSEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFSH--NNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR 459 (519)
Q Consensus 384 ~~~h~~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~h--~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~ 459 (519)
+.+-...+..|+|+|++ ++++...++.|...|+. ++.++.+.. ....-.|++.+ ++.++++.-.++.|.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcC
Confidence 44555679999999976 55557778899999998 888888753 35678889988 77777776677899999886
Q ss_pred CCcE---Eeec-------cCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 460 RCQV---VDYT-------DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 460 ~~~~---~~~~-------~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
.... +... ..+.....++|+|+++.|+++.......||.+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 5431 2111 233456899999999888888776665666554
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.03 E-value=0.55 Score=48.35 Aligned_cols=114 Identities=7% Similarity=-0.041 Sum_probs=67.4
Q ss_pred eeEEEEcCCC--eEEEEeCCCcEEEEECC-------CCeE--------------EEEecCCCcEEEEEEeeCCCCE-EEE
Q 010037 391 VLDLSWSKNG--FLLSSSADKTVRLWQVG-------IDRC--------------LRVFSHNNYVTSVAFNPVDDNY-FIS 446 (519)
Q Consensus 391 V~~l~~sp~~--~L~sgs~Dg~V~lWdl~-------~~~~--------------~~~~~h~~~V~~v~fsp~d~~~-l~s 446 (519)
...++.+|++ ++++-..++.|..+|+. ++.. +.........+.|+|+| ++++ +++
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p-~G~~lYva 327 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHP-TGKYAYFG 327 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECT-TSSEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcC-CCCEEEEE
Confidence 3567889954 55566677889999987 4543 22222345568999999 8885 455
Q ss_pred EeCCCeEEEEEcC--CCcE---EeeccC---C------------CceE-EEEEe-------eCCCEEEEEecCCeEEEEE
Q 010037 447 GSIDGKVRIWEVR--RCQV---VDYTDI---R------------EIVS-AVCYC-------PDGKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 447 gs~Dg~V~iwd~~--~~~~---~~~~~~---~------------~~V~-~v~~s-------pdg~~l~sgs~dg~v~iwd 498 (519)
-+....|+.++.. .+.+ ..+.+. . .... .++.. ++|.++++=.....|+.++
T Consensus 328 D~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~ 407 (496)
T 3kya_A 328 VINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT 407 (496)
T ss_dssp ETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC
T ss_pred eCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe
Confidence 5567889996653 3322 111111 0 1233 34444 4566555555667788888
Q ss_pred CCCCeeee
Q 010037 499 IKGMQIFD 506 (519)
Q Consensus 499 l~~~~l~~ 506 (519)
. ++.+..
T Consensus 408 ~-~G~v~T 414 (496)
T 3kya_A 408 P-EGIVST 414 (496)
T ss_dssp T-TCBEEE
T ss_pred C-CCCEEE
Confidence 3 444433
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.78 E-value=1.5 Score=42.29 Aligned_cols=113 Identities=13% Similarity=0.150 Sum_probs=66.3
Q ss_pred CCeeEEEEcCCCeEEEEeCCCcEEE-EEC--CCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 389 SEVLDLSWSKNGFLLSSSADKTVRL-WQV--GIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~Dg~V~l-Wdl--~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
..+..+++.+++.++..+.++.+.. +|- .+-+.+ .......+..+.+.| ++.+++ ++.+|.|++.+...++.-.
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~-~g~~~~-~~~~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTP-DGRLWM-IVNGGKIAFSDPDNSENWG 239 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECT-TSCEEE-EETTTEEEEEETTEEEEEC
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECC-CCCEEE-EeCCceEEEecCCCCCeeE
Confidence 4567888888884444444555443 442 222333 223566789999988 676554 4567888877533233322
Q ss_pred ---ec--cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 466 ---YT--DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 466 ---~~--~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
.. .....+.++++.+++..++++. +|.| ++....++.++
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~ 283 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQ 283 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCE
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccE
Confidence 11 1223588999998887666654 6766 45555555444
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.76 E-value=2.6 Score=44.85 Aligned_cols=227 Identities=6% Similarity=-0.059 Sum_probs=122.4
Q ss_pred eEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEE-EEEeCCCcEEEEecccCeeeceeeccCC
Q 010037 249 ELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYL-ASGGEDGTVRVWKVIEHERLDGFDVQDT 327 (519)
Q Consensus 249 ~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~L-aSgs~Dg~I~iWd~~~~~~~~~~~~~~~ 327 (519)
+|+.+ ..+.|+..++........ . .+ ..-..+..|+|++.+..| ++-..++.|..+++........+.....
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~-~----~~-~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVA-I----PL-TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEE-C----CC-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEE-eCCcEEEEECCCCCcceE-E----Ec-CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 34443 557788888874332110 0 01 123467899999965554 4555678898888865433222222222
Q ss_pred CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe-eccCCCeeEEEEcCC-CeEEEE
Q 010037 328 DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDLSWSKN-GFLLSS 405 (519)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~-~~L~sg 405 (519)
.+..+++.... ..++....... .+.+.+.. +.....+ ...-.....|++.|. |.|+-+
T Consensus 81 ~P~GlAvD~~~-~~LY~tD~~~~--------------~I~v~~~d-----G~~~~~l~~~~l~~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 81 YPEGMAVDWLG-KNLYWADTGTN--------------RIEVSKLD-----GQHRQVLVWKDLDSPRALALDPAEGFMYWT 140 (628)
T ss_dssp CCCEEEEETTT-TEEEEEETTTT--------------EEEEEETT-----STTCEEEECSSCCCEEEEEEETTTTEEEEE
T ss_pred CcceEEEEeCC-CEEEEEECCCC--------------EEEEEecC-----CCcEEEEEeCCCCCcccEEEccCCCeEEEe
Confidence 33344433222 12222222211 11111111 1111111 123345689999985 555544
Q ss_pred e--CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCceEEEEEeeCCC
Q 010037 406 S--ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTDIREIVSAVCYCPDGK 483 (519)
Q Consensus 406 s--~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~V~~v~~spdg~ 483 (519)
. ..+.|...++........+..-...+.|++++..+.++.+-...+.|...|+.......+........++++.. +.
T Consensus 141 D~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ 219 (628)
T 4a0p_A 141 EWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DY 219 (628)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TE
T ss_pred CCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CE
Confidence 4 35678888887665444445556789999999334444444567889999987643322222233456777754 44
Q ss_pred EEEEEecCCeEEEEECCCCe
Q 010037 484 GGIVGTMTGNCRFYDIKGMQ 503 (519)
Q Consensus 484 ~l~sgs~dg~v~iwdl~~~~ 503 (519)
++++-...+.|...|..+++
T Consensus 220 ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 220 IYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEETTTTEEEEEETTTCC
T ss_pred EEEecCCCCEEEEEECCCCC
Confidence 44454457889999976654
No 294
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.60 E-value=1.9 Score=42.10 Aligned_cols=114 Identities=5% Similarity=-0.061 Sum_probs=76.8
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCC-CeEEEEEcCCCcEE
Q 010037 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID-GKVRIWEVRRCQVV 464 (519)
Q Consensus 389 ~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~D-g~V~iwd~~~~~~~ 464 (519)
.....+++.+.+ ++++-...+.|.+.++........+. .-.....|+++|.++.++.+-... +.|..+++......
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 195 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR 195 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE
Confidence 345678888744 55566667889999987654433333 345679999999455555555555 78999988764433
Q ss_pred eec-cCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCC
Q 010037 465 DYT-DIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGM 502 (519)
Q Consensus 465 ~~~-~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~ 502 (519)
.+. ..-...+.++++|++..|..+. ..+.|..+|+.+.
T Consensus 196 ~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 196 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 322 2334578999998777666654 4677999998764
No 295
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.57 E-value=0.48 Score=47.44 Aligned_cols=68 Identities=13% Similarity=0.247 Sum_probs=51.3
Q ss_pred cCCCeeEEEEcCCC----eEEEEeCCCcEEEEECCCC--eEEEEec----------CCCcEEEEEEeeCCCCEEEEEe--
Q 010037 387 HSSEVLDLSWSKNG----FLLSSSADKTVRLWQVGID--RCLRVFS----------HNNYVTSVAFNPVDDNYFISGS-- 448 (519)
Q Consensus 387 h~~~V~~l~~sp~~----~L~sgs~Dg~V~lWdl~~~--~~~~~~~----------h~~~V~~v~fsp~d~~~l~sgs-- 448 (519)
...+|..+.|+|-+ .|++-..|++||+||+... ++. .+. ....|.+++|.+ ++-.|...+
T Consensus 123 ~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lTLYvl~~t 200 (452)
T 3pbp_A 123 PKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSK-DGLTLYCLNTT 200 (452)
T ss_dssp CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECT-TSSCEEEEECT
T ss_pred CCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcC-CCcEEEEEecC
Confidence 36789999999965 8999999999999999852 222 332 225788999998 777676655
Q ss_pred CCCeEEEE
Q 010037 449 IDGKVRIW 456 (519)
Q Consensus 449 ~Dg~V~iw 456 (519)
.+|.|+-.
T Consensus 201 ~~GDIYAl 208 (452)
T 3pbp_A 201 EGGDIFAF 208 (452)
T ss_dssp TSCEEEEE
T ss_pred CCCCEEEE
Confidence 77887654
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.54 E-value=0.21 Score=50.06 Aligned_cols=77 Identities=13% Similarity=0.098 Sum_probs=53.1
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccccc-----cccccceeec------CCCCEEEEEEcc---CCCEEEEEe
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRELS-----SLYTGQEFLA------HEGSILTMKFSL---DGQYLASGG 303 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~-----~~~~~~~l~~------H~~~I~~l~fsp---dg~~LaSgs 303 (519)
+..+..+|+|.+||..+ +..|.|-.+........ .....+.+.- ...+|..+.|+| .+..|++-.
T Consensus 68 i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 68 TFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred eeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 34478999999999875 45788887773221111 0011112221 357899999999 456899999
Q ss_pred CCCcEEEEeccc
Q 010037 304 EDGTVRVWKVIE 315 (519)
Q Consensus 304 ~Dg~I~iWd~~~ 315 (519)
.|++||+||+..
T Consensus 147 sD~~Ir~yDl~~ 158 (452)
T 3pbp_A 147 EDDTITMFDILN 158 (452)
T ss_dssp TTSCEEEEETTC
T ss_pred cCCEEEEEEccc
Confidence 999999999975
No 297
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.44 E-value=0.91 Score=45.10 Aligned_cols=114 Identities=11% Similarity=0.030 Sum_probs=77.6
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 389 ~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
..+..++|.+.+ ++++-...+.|..+++........+. .......|++.+..++++++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 347789999754 55555677889999998776555443 233557789988556666666677889999987654332
Q ss_pred -eccCCCceEEEEEeeCCCEEEEEec-C-CeEEEEECCCC
Q 010037 466 -YTDIREIVSAVCYCPDGKGGIVGTM-T-GNCRFYDIKGM 502 (519)
Q Consensus 466 -~~~~~~~V~~v~~spdg~~l~sgs~-d-g~v~iwdl~~~ 502 (519)
....-.....+++.|.+..|..... . +.|..+++.+.
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 2233356789999987666555543 3 67888888754
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.36 E-value=0.78 Score=45.06 Aligned_cols=90 Identities=13% Similarity=0.222 Sum_probs=58.0
Q ss_pred CCcEEEEECCCC--e--EEEEecC--CCcEEEEEEeeCCCCEEEEEeC-----------------CCeEEEEEcCCCcEE
Q 010037 408 DKTVRLWQVGID--R--CLRVFSH--NNYVTSVAFNPVDDNYFISGSI-----------------DGKVRIWEVRRCQVV 464 (519)
Q Consensus 408 Dg~V~lWdl~~~--~--~~~~~~h--~~~V~~v~fsp~d~~~l~sgs~-----------------Dg~V~iwd~~~~~~~ 464 (519)
+.+|.+|++... . .+..+.+ -...+.+.+.+ ++.++++... .|.|.-+|.. ++.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE
Confidence 467777776543 2 2233332 34679999999 8888777641 2445555543 332
Q ss_pred eeccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECC
Q 010037 465 DYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIK 500 (519)
Q Consensus 465 ~~~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~ 500 (519)
.....-...+.++|+||++.|.++. ..+.|+.|++.
T Consensus 215 ~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 215 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 2233334568999999998877765 57889999986
No 299
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.06 E-value=1.5 Score=41.29 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=57.9
Q ss_pred CcEEEEECCCCeEEEEec--CCC-cEEEEEEeeCCCCEEEEEeCC-----CeEEEEEcCCCcEEeeccC---CCceEEEE
Q 010037 409 KTVRLWQVGIDRCLRVFS--HNN-YVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDI---REIVSAVC 477 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~--h~~-~V~~v~fsp~d~~~l~sgs~D-----g~V~iwd~~~~~~~~~~~~---~~~V~~v~ 477 (519)
..+.+||+.+.+....-. ... ...++.+ ++.+++.|+.+ ..|.+||+.+.+-...... ......+.
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 251 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV 251 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE
Confidence 468899998887655432 111 1122222 56777777764 4689999988764433221 11222222
Q ss_pred EeeCCCEEEEEecC-----CeEEEEECCCCeeeecc
Q 010037 478 YCPDGKGGIVGTMT-----GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 478 ~spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~~ 508 (519)
-++++++.|+.+ ..+.+||+.+++-..+.
T Consensus 252 --~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 252 --LRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp --ETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred --ECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 377788888765 46899999988765554
No 300
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.05 E-value=2.5 Score=40.39 Aligned_cols=114 Identities=10% Similarity=-0.011 Sum_probs=76.1
Q ss_pred CCeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCC-CeEEEEEcCCCcEE
Q 010037 389 SEVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID-GKVRIWEVRRCQVV 464 (519)
Q Consensus 389 ~~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~D-g~V~iwd~~~~~~~ 464 (519)
.....+++.+. + ++++-...+.|.+.++........+. .-.....++++|.++.++++.... +.|...++......
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~ 156 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 156 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE
Confidence 34578888864 4 44555678899999988655444443 345678999999444444444333 78888888654333
Q ss_pred ee-ccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCC
Q 010037 465 DY-TDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGM 502 (519)
Q Consensus 465 ~~-~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~ 502 (519)
.+ ...-...+.++++|++..|..+. ..+.|..+|+.+.
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 22 22335678999999877776655 4568999998754
No 301
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.97 E-value=0.28 Score=44.58 Aligned_cols=97 Identities=9% Similarity=-0.006 Sum_probs=57.4
Q ss_pred eeEEEEcCCCeEEEEeCCCcEEEEECCCCeEE------EEec--CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc
Q 010037 391 VLDLSWSKNGFLLSSSADKTVRLWQVGIDRCL------RVFS--HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ 462 (519)
Q Consensus 391 V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~------~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~ 462 (519)
-..+.|.|+|.|..+ .||.|.-++-.+.... ..+. -=..+..|.|.| ++.+.++. |+.++-+...+..
T Consensus 90 F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSN 165 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSST
T ss_pred ceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCC
Confidence 467889999966555 5688877765332111 1111 113579999999 88887777 8876544443222
Q ss_pred EEee-------c-cCCCceEEEEEeeCCCEEEEEecCCe
Q 010037 463 VVDY-------T-DIREIVSAVCYCPDGKGGIVGTMTGN 493 (519)
Q Consensus 463 ~~~~-------~-~~~~~V~~v~~spdg~~l~sgs~dg~ 493 (519)
...+ . ..-...+-+.|.|+|.+.++. +|.
T Consensus 166 ~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 166 QDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp TCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred CcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 1111 1 122234557799999876665 664
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.90 E-value=2.3 Score=45.21 Aligned_cols=196 Identities=6% Similarity=-0.074 Sum_probs=107.1
Q ss_pred ceeecCCCCeEEee-ecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCC-EEEEEeCCCcEEEEecccCe
Q 010037 240 SATLKPGDHELTLG-QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQ-YLASGGEDGTVRVWKVIEHE 317 (519)
Q Consensus 240 ~~~~sp~g~~lasg-s~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~-~LaSgs~Dg~I~iWd~~~~~ 317 (519)
.++|++.+..|..+ ...+.|..++........ ..+..--.....|++.+.+. +.++-...+.|.+.++....
T Consensus 44 ~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~------~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 44 AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ------NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC-----CE------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEEEeCCCEEEEEECCCCeEEEEEccCCCceE------EEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 47888876666554 346788888876432100 01222224678999998555 44454566788888875432
Q ss_pred eeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEc
Q 010037 318 RLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 397 (519)
.. .+ +...-.....|++.
T Consensus 118 ~~-~l-------------------------------------------------------------~~~~l~~P~~Iavd 135 (619)
T 3s94_A 118 RK-VL-------------------------------------------------------------FWQELDQPRAIALD 135 (619)
T ss_dssp CE-EE-------------------------------------------------------------ECSSCSCCCCEEEE
T ss_pred EE-EE-------------------------------------------------------------EeCCCCCCceEEEe
Confidence 11 00 00112335677887
Q ss_pred CCC-eEEEEeC--CCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEeecc-CCCc
Q 010037 398 KNG-FLLSSSA--DKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVDYTD-IREI 472 (519)
Q Consensus 398 p~~-~L~sgs~--Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-~~~~ 472 (519)
|.+ .|+.+.. .+.|...++.......... .-...+.|+++|..++++++-...+.|...|+.......... ....
T Consensus 136 p~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~ 215 (619)
T 3s94_A 136 PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPH 215 (619)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------
T ss_pred cCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCC
Confidence 754 4444432 3566666665443333332 445678999999444455555566789999987644332211 1222
Q ss_pred eEEEEEeeCCCEEEEEecCCeEEEEECCCCee
Q 010037 473 VSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQI 504 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l 504 (519)
..++++..+ ..+++-...+.|...|..+++.
T Consensus 216 P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 216 PFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred ceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 346667555 3344444567799999877653
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.73 E-value=1.9 Score=40.76 Aligned_cols=96 Identities=8% Similarity=0.112 Sum_probs=57.0
Q ss_pred CCcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCC-----CeEEEEEcCCCcEEeecc---CCCceEEEE
Q 010037 408 DKTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTD---IREIVSAVC 477 (519)
Q Consensus 408 Dg~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~D-----g~V~iwd~~~~~~~~~~~---~~~~V~~v~ 477 (519)
-..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..|.+||+.+.+-..... ......++.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 3458899998887655432 11111122222 56677777653 368999998865433221 122223333
Q ss_pred EeeCCCEEEEEecC-----CeEEEEECCCCeeeec
Q 010037 478 YCPDGKGGIVGTMT-----GNCRFYDIKGMQIFDL 507 (519)
Q Consensus 478 ~spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~ 507 (519)
+ ++++++.|+.+ ..+.+||+.+++-..+
T Consensus 246 ~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 246 V--GSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp E--TTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred E--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 3 77888888854 5689999998765544
No 304
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.67 E-value=0.12 Score=55.96 Aligned_cols=113 Identities=9% Similarity=-0.013 Sum_probs=69.1
Q ss_pred eeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeCC-CeEEEEEcCCCcEEee
Q 010037 391 VLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSID-GKVRIWEVRRCQVVDY 466 (519)
Q Consensus 391 V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~D-g~V~iwd~~~~~~~~~ 466 (519)
...|++.+. + ++++-...+.|.++++........+. .......|+++|..+.++++-... +.|.++++.......+
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 345666643 3 44454567889999987665444443 234567889999445555443333 6788887764332222
Q ss_pred c-cCCCceEEEEEeeCCCEEEEE-ecCCeEEEEECCCCe
Q 010037 467 T-DIREIVSAVCYCPDGKGGIVG-TMTGNCRFYDIKGMQ 503 (519)
Q Consensus 467 ~-~~~~~V~~v~~spdg~~l~sg-s~dg~v~iwdl~~~~ 503 (519)
. ..-...+.|+|+|++..|+.+ +..+.|.++++.+..
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~ 573 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 573 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc
Confidence 1 223456789999986655554 456789999987543
No 305
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.43 E-value=3.8 Score=39.55 Aligned_cols=218 Identities=14% Similarity=0.196 Sum_probs=126.5
Q ss_pred CeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEee
Q 010037 257 RRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFTI 336 (519)
Q Consensus 257 g~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 336 (519)
.+|.|-|+......... .+.+ + +.-.+|..+.||--. ..++.|+|+++...++.+...+ ..++|..
T Consensus 49 ~~VvIiDl~n~~~~~Rr-----pi~A-d----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e---~VvfWkW 114 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRR-----PISA-D----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD---DVTFWKW 114 (365)
T ss_dssp EEEEEEETTSTTSCEEE-----ECCC-S----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS---CEEEEEE
T ss_pred CEEEEEECCCCCCcccc-----cccc-c----eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC---ccEEEEe
Confidence 47888888765432111 1111 1 233477777766655 5789999999999888877654 3556655
Q ss_pred cCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC----CCeeEEEEcCCC--eEEEEe----
Q 010037 337 NHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS----SEVLDLSWSKNG--FLLSSS---- 406 (519)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~V~~l~~sp~~--~L~sgs---- 406 (519)
-....+..+. +..++.|+... ...|.+.+..|. ..|..-..+++. .+++|-
T Consensus 115 is~~~L~lVT----------------~taVyHWs~~~---~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~ 175 (365)
T 2xzh_A 115 ISLNTVALVT----------------DNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQ 175 (365)
T ss_dssp CSSSEEEEEE----------------SSEEEEEESST---TCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEET
T ss_pred cCCCeEEEEc----------------CCcEEEEcccC---CCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccC
Confidence 5544433221 12334443221 234555555543 466667777777 334432
Q ss_pred --CCCcEEEEECCCCeEEEEecCCCcEEEEEEe--eCCCCEEEEEeC---CCeEEEEEcCCC---------cEEee-cc-
Q 010037 407 --ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFN--PVDDNYFISGSI---DGKVRIWEVRRC---------QVVDY-TD- 468 (519)
Q Consensus 407 --~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fs--p~d~~~l~sgs~---Dg~V~iwd~~~~---------~~~~~-~~- 468 (519)
-.|.+.||..+.+.....-.|......+.+. +....+|+.+.. .++++|-++... +.+.. ..
T Consensus 176 ~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fpp 255 (365)
T 2xzh_A 176 NRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 255 (365)
T ss_dssp TEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCT
T ss_pred CccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCc
Confidence 2367889998877655444454333322221 101123333222 258999998432 12221 11
Q ss_pred --CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 469 --IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 469 --~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
..+-.-++..++.-..+..-+.-|.+++||+.++.++..
T Consensus 256 ea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 256 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp TCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 234456788888878899999999999999999987654
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.26 E-value=9.7 Score=43.56 Aligned_cols=114 Identities=9% Similarity=0.090 Sum_probs=73.8
Q ss_pred CeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEE--EecCCCcEEEEEEeeCC-----CCEEEEEeC-CCeEEEEEcCCC
Q 010037 390 EVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLR--VFSHNNYVTSVAFNPVD-----DNYFISGSI-DGKVRIWEVRRC 461 (519)
Q Consensus 390 ~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~--~~~h~~~V~~v~fsp~d-----~~~l~sgs~-Dg~V~iwd~~~~ 461 (519)
.|...+.+.. .++.++ .+.+.++.+..++... .......|.|+++.|.. ..+++.|.. |++|+|+.+.+.
T Consensus 515 ~I~~As~n~~-~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 515 NISVASCNSS-QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCCEEEECSS-EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEEeCCC-EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 4555554433 444444 5778888877654322 22356789999998732 479999997 999999999987
Q ss_pred cEEeeccC--CCceEEEEEee--CCCEEEEEecCCeEEEEEC--CCCeee
Q 010037 462 QVVDYTDI--REIVSAVCYCP--DGKGGIVGTMTGNCRFYDI--KGMQIF 505 (519)
Q Consensus 462 ~~~~~~~~--~~~V~~v~~sp--dg~~l~sgs~dg~v~iwdl--~~~~l~ 505 (519)
+.+..... .....++++.. ...+|.+|-.||.+.-+.+ .++++.
T Consensus 593 ~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~ 642 (1158)
T 3ei3_A 593 ELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 642 (1158)
T ss_dssp CEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEE
T ss_pred CeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccc
Confidence 76643322 23455555543 3357889999999765544 455543
No 307
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.24 E-value=5.1 Score=40.26 Aligned_cols=219 Identities=14% Similarity=0.196 Sum_probs=127.3
Q ss_pred CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEe
Q 010037 256 MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFT 335 (519)
Q Consensus 256 dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~ 335 (519)
..+|.|-|+......... .+.+ + +.-.+|..+.||-=. ..++.|+|+++...++.+...+. .++|.
T Consensus 47 ~~~vvIiDl~~~~~~~rr-----pi~A-d----sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~---VvfWk 112 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRR-----PISA-D----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD---VTFWK 112 (494)
T ss_dssp CCEEEEEETTSTTSCEEE-----ECCC-S----EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC---CCEEE
T ss_pred CCeEEEEECCCCCcceec-----cccc-c----eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC---ceEEE
Confidence 347888888764432111 1111 1 234567666666554 67999999999998888877654 33443
Q ss_pred ecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccC----CCeeEEEEcCCC-e-EEEEe---
Q 010037 336 INHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHS----SEVLDLSWSKNG-F-LLSSS--- 406 (519)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~V~~l~~sp~~-~-L~sgs--- 406 (519)
.-....+..+ .+..++.|+... ...|.+.+..|. ..|..-..+++. + +++|-
T Consensus 113 Wis~~~l~lV----------------T~taVyHWsi~~---~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 173 (494)
T 1bpo_A 113 WISLNTVALV----------------TDNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (494)
T ss_dssp EEETTEEEEE----------------CSSEEEEEESSS---SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred ecCCCeEEEE----------------cCCeeEEecccC---CCCchhheecchhcccceEEEEEECCCCCeEEEEeeccc
Confidence 3332222211 122344444322 234555565553 467777777777 4 33432
Q ss_pred ---CCCcEEEEECCCCeEEEEecCCCcEEEEEEee--CCCCEEEEEeC---CCeEEEEEcCCC---------cEEeec--
Q 010037 407 ---ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNP--VDDNYFISGSI---DGKVRIWEVRRC---------QVVDYT-- 467 (519)
Q Consensus 407 ---~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp--~d~~~l~sgs~---Dg~V~iwd~~~~---------~~~~~~-- 467 (519)
..|.+.||.++.+.....-.|......+.+.- ....+|+.+.. .++++|.++... +.+...
T Consensus 174 ~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp 253 (494)
T 1bpo_A 174 QNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 253 (494)
T ss_dssp TTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC
T ss_pred CCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC
Confidence 34778899988776554444544443333321 01123444433 379999998542 122211
Q ss_pred --cCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 468 --DIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 468 --~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
...+-.-++..++.-..+..-+.-|.+++||+.++.++..
T Consensus 254 pe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 254 PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp TTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cccccCceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 1234456788888888899999999999999999987654
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.21 E-value=4.2 Score=39.22 Aligned_cols=241 Identities=10% Similarity=0.162 Sum_probs=138.8
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC-eee
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH-ERL 319 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~-~~~ 319 (519)
.-.+|..+.+|.-. ..++.|++++...+..+ +. ....|.-=+|-.+ +.|+-.+. ..|.-|++... ...
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks-------~~-~~e~VvfWkWis~-~~L~lVT~-taVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKA-------HT-MTDDVTFWKWISL-NTVALVTD-NAVYHWSMEGESQPV 140 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEE-------EE-CSSCEEEEEECSS-SEEEEEES-SEEEEEESSTTCCCE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcc-------ee-cCCccEEEEecCC-CeEEEEcC-CcEEEEcccCCCCCc
Confidence 34688888777754 68899999986543211 11 1346777777644 45665554 47999999653 233
Q ss_pred ceeeccCC--CCceEEEeecCCCCeEEee-ccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEE
Q 010037 320 DGFDVQDT--DPSCLYFTINHLSQLIPID-VDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (519)
Q Consensus 320 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 396 (519)
+.+..+.. ....+.+..+.......+. ... -.+.-.+.+.++ ....+.-+.+.||.+.-..+..
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~--------~~~~v~G~mQLY-----S~er~~sQ~ieGhaa~F~~~~~ 207 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISA--------QQNRVVGAMQLY-----SVDRKVSQPIEGHAASFAQFKM 207 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEE--------ETTEEEEEEEEE-----ETTTTEEEEECCSEEEEEEECC
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEeEec--------cCCccceeEEEE-----eecccccceeeeeeeeeEEEec
Confidence 33333222 2333334444333322211 100 000011222222 2223445567777665444433
Q ss_pred cCCC----eEEEEeC---CCcEEEEECCCC---------eEEEEe-c---CCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 397 SKNG----FLLSSSA---DKTVRLWQVGID---------RCLRVF-S---HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 397 sp~~----~L~sgs~---Dg~V~lWdl~~~---------~~~~~~-~---h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
..+. .++.+.. .+.++|-++... +.+..+ . ..+..-+++.++ ....+..-+.-|.|++|
T Consensus 208 ~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~ihly 286 (365)
T 2xzh_A 208 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLY 286 (365)
T ss_dssp TTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEE
T ss_pred CCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeCCcEEEEE
Confidence 2221 3333332 257888888432 112222 1 356678899998 77888888999999999
Q ss_pred EcCCCcEEe-eccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 457 EVRRCQVVD-YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 457 d~~~~~~~~-~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
|+.++.++. -.-..+.|...+.+.....++....+|.|.--.+....++.
T Consensus 287 DleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivp 337 (365)
T 2xzh_A 287 DLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 337 (365)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHH
T ss_pred EcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEeh
Confidence 999999984 33345566666666666677777889998887777766543
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.20 E-value=4.5 Score=39.48 Aligned_cols=242 Identities=12% Similarity=0.031 Sum_probs=115.3
Q ss_pred cceeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC---CCEEEEEeC----C----Cc
Q 010037 239 GSATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD---GQYLASGGE----D----GT 307 (519)
Q Consensus 239 ~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd---g~~LaSgs~----D----g~ 307 (519)
..++|.|+|.++++ ...|.|++++.. ....+..+. .+.........|+|+|+ +..|..+.. + ..
T Consensus 32 ~~ia~~pdG~l~V~-e~~g~I~~~d~~-G~~~~~~~~---v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 32 WSIAPLGGGRYLVT-ERPGRLVLISPS-GKKLVASFD---VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp EEEEEEETTEEEEE-ETTTEEEEECSS-CEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred eEEEEcCCCeEEEE-eCCCEEEEEeCC-CceEeeccc---eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 35899999985554 556999998733 221111111 11122356889999997 444444332 2 45
Q ss_pred EEEEecccCe--e------eceeec-cCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc
Q 010037 308 VRVWKVIEHE--R------LDGFDV-QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (519)
Q Consensus 308 I~iWd~~~~~--~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 378 (519)
|..|+..... . +..+.. .......+.+.++. .++....+....... .-.....+.+..+++.-.-...
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG--~Lyvt~G~~~~~~~~-~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG--MLYITTGDAADPRLA-QDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS--CEEEECCCTTCGGGG-TCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC--cEEEEECCCCCCccc-cCCCCCCeEEEEEcCCCCCCCC
Confidence 6667665431 0 111111 11122334444433 222221111000000 0001122344444432110000
Q ss_pred c----ceeEeeccCCCeeEEEEcC-CCeEEEEeCCC----cEEEEECCC----------------CeEEEEe-cCCCcEE
Q 010037 379 K----PLHEFQGHSSEVLDLSWSK-NGFLLSSSADK----TVRLWQVGI----------------DRCLRVF-SHNNYVT 432 (519)
Q Consensus 379 ~----~~~~~~~h~~~V~~l~~sp-~~~L~sgs~Dg----~V~lWdl~~----------------~~~~~~~-~h~~~V~ 432 (519)
. ......+|. ....|+|+| ++.|+++.... .|.+..-.. ..++..+ .......
T Consensus 184 npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 184 NPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 0 011122333 356899999 56555543321 133322110 0123333 2234577
Q ss_pred EEEEee------CCCCEEEEEeCCCeEEEEEcCCC-cEE---eec-cCCCceEEEEEeeCCCEEEEEe
Q 010037 433 SVAFNP------VDDNYFISGSIDGKVRIWEVRRC-QVV---DYT-DIREIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 433 ~v~fsp------~d~~~l~sgs~Dg~V~iwd~~~~-~~~---~~~-~~~~~V~~v~~spdg~~l~sgs 489 (519)
.++|.. .++.++++....+.|...++... +.. .+. .....+..+++.|||.++++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 888841 26777777767788999888753 332 222 2245789999999997666654
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.17 E-value=0.045 Score=49.80 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=64.3
Q ss_pred CCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEecCCCc--------EEEEEEeeCCCCEEEEEeCCCeEEEEEcCC
Q 010037 389 SEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFSHNNY--------VTSVAFNPVDDNYFISGSIDGKVRIWEVRR 460 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~--------V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~ 460 (519)
..+.+++|+|+|.|... .++.+.-.+..+.....-+..... ..++.|.| ++.+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEEeCCCc
Confidence 36779999998866665 677666656544211111111111 47889999 8887777 569998888754
Q ss_pred CcEEeecc--------CCCceEEEEEeeCCCEEEEEecCCeEEE
Q 010037 461 CQVVDYTD--------IREIVSAVCYCPDGKGGIVGTMTGNCRF 496 (519)
Q Consensus 461 ~~~~~~~~--------~~~~V~~v~~spdg~~l~sgs~dg~v~i 496 (519)
...-.+.. .-..+..|.+.|+|.+.++. ||.++-
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 32222111 11357999999999877666 787543
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.15 E-value=4.6 Score=40.97 Aligned_cols=33 Identities=9% Similarity=-0.005 Sum_probs=22.7
Q ss_pred CCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 284 EGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 284 ~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
-...+.|+|.|+|+++++--..+.|++++..++
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCC
Confidence 345689999999997776543346777765433
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.76 E-value=6.3 Score=39.60 Aligned_cols=241 Identities=10% Similarity=0.160 Sum_probs=140.3
Q ss_pred eeecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe-ee
Q 010037 241 ATLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE-RL 319 (519)
Q Consensus 241 ~~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~-~~ 319 (519)
.-.+|..+.+|.-. ..++.|++++...+.-+ +. ....|.-=+|-.+ +.|+-.+. ..|.-|++.... ..
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks-------~~-~~e~VvfWkWis~-~~l~lVT~-taVyHWsi~~~s~P~ 139 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKA-------HT-MTDDVTFWKWISL-NTVALVTD-NAVYHWSMEGESQPV 139 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEE-------EE-CSSCCCEEEEEET-TEEEEECS-SEEEEEESSSSCCCE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcc-------ee-cCCCceEEEecCC-CeEEEEcC-CeeEEecccCCCCch
Confidence 35778877777654 68899999985443211 11 1245666677644 45666654 579999996532 33
Q ss_pred ceeeccCC--CCceEEEeecCCCCeEEee-ccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEE
Q 010037 320 DGFDVQDT--DPSCLYFTINHLSQLIPID-VDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSW 396 (519)
Q Consensus 320 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 396 (519)
+.+..+.. ....+.+..+.......+. ... -.+...+.+.++ ....+.-+.+.||.+.-..+..
T Consensus 140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~--------~~~~v~G~mQLY-----S~er~~sQ~ieGhaa~F~~~~~ 206 (494)
T 1bpo_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISA--------QQNRVVGAMQLY-----SVDRKVSQPIEGHAASFAQFKM 206 (494)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEE--------ETTEEEEEEEEE-----ESTTCCEEEECCSEEEEEEEEC
T ss_pred hheecchhcccceEEEEEECCCCCeEEEEeecc--------cCCcccceEEEe-----eccccccchheeeeeeeEEEec
Confidence 33333222 2333334333333322211 100 000011222222 2223445667788766555544
Q ss_pred cCCC----eEEEEeCC---CcEEEEECCCC---------eEEEEe-c---CCCcEEEEEEeeCCCCEEEEEeCCCeEEEE
Q 010037 397 SKNG----FLLSSSAD---KTVRLWQVGID---------RCLRVF-S---HNNYVTSVAFNPVDDNYFISGSIDGKVRIW 456 (519)
Q Consensus 397 sp~~----~L~sgs~D---g~V~lWdl~~~---------~~~~~~-~---h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iw 456 (519)
..+. .++.+... +.++|-++... +.+..+ . ..+...++..++ ....+..-+.-|.|++|
T Consensus 207 ~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G~i~ly 285 (494)
T 1bpo_A 207 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLY 285 (494)
T ss_dssp TTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTSEEEEE
T ss_pred CCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCceEEEE
Confidence 3322 34444433 78899888543 111111 1 356678899999 77888888999999999
Q ss_pred EcCCCcEEe-eccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 457 EVRRCQVVD-YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 457 d~~~~~~~~-~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
|+.++.++. -.-..+.|...+.......++....+|.|.--.+....++.
T Consensus 286 DleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivp 336 (494)
T 1bpo_A 286 DLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 336 (494)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHH
T ss_pred ecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccchh
Confidence 999999884 33345566666666676778888889988877777666543
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.51 E-value=2.8 Score=40.90 Aligned_cols=34 Identities=15% Similarity=0.053 Sum_probs=25.9
Q ss_pred CCCCEEEEEEccCCCEEEEEeCCCcEEEEecccC
Q 010037 283 HEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEH 316 (519)
Q Consensus 283 H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~ 316 (519)
.-...+.|+|.|||++|++--..|.|++++...+
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCC
Confidence 3456789999999997777655888988875444
No 314
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.47 E-value=6.6 Score=38.95 Aligned_cols=203 Identities=10% Similarity=-0.041 Sum_probs=105.8
Q ss_pred ccceeecCCCCeEEee-ecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEeccc
Q 010037 238 HGSATLKPGDHELTLG-QRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSL-DGQYLASGGEDGTVRVWKVIE 315 (519)
Q Consensus 238 ~~~~~~sp~g~~lasg-s~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fsp-dg~~LaSgs~Dg~I~iWd~~~ 315 (519)
...++|++.+..|... ...+.|+.+++...... . .....+.........|++.+ .+++.++-...+.|.+.++..
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~-~--~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-S--SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-------C--CCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCC-C--cceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 3457899866655544 45678888887642210 0 00011222345678899988 455555556678899988865
Q ss_pred CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEe-eccCCCeeEE
Q 010037 316 HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEF-QGHSSEVLDL 394 (519)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~l 394 (519)
......+......+..+++.+.. ..++....... ..+...+. .+.....+ ...-.....|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~-g~ly~td~~~~-------------~~I~~~~~-----dG~~~~~~~~~~l~~P~gl 251 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTP-------------AKIKKGGL-----NGVDIYSLVTENIQWPNGI 251 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTT-TEEEEEECSSS-------------CCEEEEET-----TSCSCEEEECSSCSCEEEE
T ss_pred CceEEEEeCCCCCcceEEEeccc-CeEEEEeCCCC-------------CEEEEEeC-----CCCccEEEEECCCCceEEE
Confidence 54333332222223333333322 11222221110 11111111 11111111 2223567889
Q ss_pred EEcCCC-eEE-EEeCCCcEEEEECCCCeEEEEec---CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE
Q 010037 395 SWSKNG-FLL-SSSADKTVRLWQVGIDRCLRVFS---HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVV 464 (519)
Q Consensus 395 ~~sp~~-~L~-sgs~Dg~V~lWdl~~~~~~~~~~---h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~ 464 (519)
++++.+ .|+ +-+..+.|..+|+.......... .-.....|++. .+.++.+-...+.|..+|..+++.+
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 252 TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred EEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCce
Confidence 999866 554 44567889999987654333332 22445677773 4566667667788999997776544
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.43 E-value=2.3 Score=40.36 Aligned_cols=95 Identities=9% Similarity=0.132 Sum_probs=56.6
Q ss_pred CcEEEEECCCCeEEEEec--CC-CcEEEEEEeeCCCCEEEEEeCC-----CeEEEEEcCCCcEEeeccC---CCceEEEE
Q 010037 409 KTVRLWQVGIDRCLRVFS--HN-NYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDI---REIVSAVC 477 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~--h~-~~V~~v~fsp~d~~~l~sgs~D-----g~V~iwd~~~~~~~~~~~~---~~~V~~v~ 477 (519)
..+.+||+.+.+....-. .. ....++.+ ++.+++.|+.+ ..+.+||+.+.+-...... ......+.
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 260 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV 260 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ceEEEEeCCCCeEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE
Confidence 458899998876654322 11 11222222 56777777664 4699999988754432221 11222222
Q ss_pred EeeCCCEEEEEecC-----CeEEEEECCCCeeeecc
Q 010037 478 YCPDGKGGIVGTMT-----GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 478 ~spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~~ 508 (519)
-++++++.|+.+ ..+.+||+.+++-..+.
T Consensus 261 --~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 261 --HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp --ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred --ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 367788888754 45889999988765543
No 316
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.56 E-value=8.2 Score=41.76 Aligned_cols=114 Identities=10% Similarity=0.099 Sum_probs=73.2
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEe-c-----CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC
Q 010037 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVF-S-----HNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC 461 (519)
Q Consensus 388 ~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~-~-----h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~ 461 (519)
...|.++...+++.|..++.. -|..++..+++..... . ....|.++...+ ++..|..|+. +-|..+|..++
T Consensus 145 ~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp CSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTT
T ss_pred CCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCC
Confidence 346888888888866666654 4778888777643321 1 123488888877 5665555553 45888998877
Q ss_pred cEEeecc-CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 462 QVVDYTD-IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 462 ~~~~~~~-~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+...... ....|.++...++|. |.+|+.+ -+.+|+..++++..
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~-lWigT~~-Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGD-LLAGTDN-GLYVYHNDTTPLQH 265 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCC-EEEEETT-EEEEECCTTSCCEE
T ss_pred eEEeccCCCCCeEEEEEEcCCCC-EEEEeCC-ceeEEecCCCcEEE
Confidence 6543221 234578888877876 4555644 57888887765543
No 317
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.51 E-value=2.7 Score=40.99 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=62.1
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEE--EEec----CCCcEEEEEEeeCC----CCEEEEEeCC-----Ce
Q 010037 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCL--RVFS----HNNYVTSVAFNPVD----DNYFISGSID-----GK 452 (519)
Q Consensus 388 ~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~--~~~~----h~~~V~~v~fsp~d----~~~l~sgs~D-----g~ 452 (519)
-.....|+|.|+|.|+.+..++.|++++ .++.. ..+. .......|+|+| + +.++++-... ..
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCCCCCccE
Confidence 3457899999999666667789999998 44322 2121 235689999999 6 4444443332 67
Q ss_pred EEEEEcCCCc-----E-Ee-ec---cCCCceEEEEEeeCCCEEEEE
Q 010037 453 VRIWEVRRCQ-----V-VD-YT---DIREIVSAVCYCPDGKGGIVG 488 (519)
Q Consensus 453 V~iwd~~~~~-----~-~~-~~---~~~~~V~~v~~spdg~~l~sg 488 (519)
|..|+..... . +. +. ........++|.|||.++++-
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 8888877532 1 12 22 111234689999999766653
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.95 E-value=2.6 Score=41.27 Aligned_cols=99 Identities=13% Similarity=0.118 Sum_probs=62.5
Q ss_pred CCCeeEEEEcCCCeEEEEeCCCcEEEEECCCCe-EEEEec----CCCcEEEEEEeeCC----CCEEEEEeC---C----C
Q 010037 388 SSEVLDLSWSKNGFLLSSSADKTVRLWQVGIDR-CLRVFS----HNNYVTSVAFNPVD----DNYFISGSI---D----G 451 (519)
Q Consensus 388 ~~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~-~~~~~~----h~~~V~~v~fsp~d----~~~l~sgs~---D----g 451 (519)
-.....|+|.|+|.|+.+..++.|++++ ..++ .+..+. .......|+|+| + +.++++-+. + .
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~p-df~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHP-EFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCC-CCCcCCEEEEEEeccCCCCCcce
Confidence 3457899999999777777789999997 3444 222221 235689999999 5 444444332 3 5
Q ss_pred eEEEEEcCCC-------cEE-e-ecc-CCCceEEEEEeeCCCEEEEE
Q 010037 452 KVRIWEVRRC-------QVV-D-YTD-IREIVSAVCYCPDGKGGIVG 488 (519)
Q Consensus 452 ~V~iwd~~~~-------~~~-~-~~~-~~~~V~~v~~spdg~~l~sg 488 (519)
.|..|+.... +.+ . +.. .......++|.|||.++++-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 6777887654 111 1 111 11234679999999876664
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.63 E-value=2.9 Score=40.84 Aligned_cols=28 Identities=21% Similarity=0.398 Sum_probs=21.5
Q ss_pred CCEEEEEEccCCC-EEEEEeCCCcEEEEec
Q 010037 285 GSILTMKFSLDGQ-YLASGGEDGTVRVWKV 313 (519)
Q Consensus 285 ~~I~~l~fspdg~-~LaSgs~Dg~I~iWd~ 313 (519)
...+.|+|.|+|+ +++ +...|.|++++.
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~ 46 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQA 46 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEET
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeC
Confidence 3568999999999 554 556788888874
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.23 E-value=7.7 Score=36.27 Aligned_cols=96 Identities=10% Similarity=0.128 Sum_probs=56.5
Q ss_pred CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCC-----CeEEEEEcCCCcEEeeccCC---CceEEEEE
Q 010037 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIR---EIVSAVCY 478 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~D-----g~V~iwd~~~~~~~~~~~~~---~~V~~v~~ 478 (519)
..+.+||+.+.+....-. ....-.+++. - ++.+++.|+.+ ..+.+||+.+.+-....... .....+.
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 204 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQTAREGAGLVV-A-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL- 204 (301)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCBSCEEEE-E-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred ceEEEEcCCCCeEEECCCCCCCcccceEEE-E-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-
Confidence 358889988876554432 1111112222 2 56777777654 45899999887544322211 1122222
Q ss_pred eeCCCEEEEEecC-----CeEEEEECCCCeeeecc
Q 010037 479 CPDGKGGIVGTMT-----GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 479 spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~~ 508 (519)
-++++++.|+.+ ..+.+||+.+++-..+.
T Consensus 205 -~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 205 -LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp -ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred -ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 367777888764 46899999988765553
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.08 E-value=9.9 Score=35.51 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=57.9
Q ss_pred CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCC-----CeEEEEEcCCCcEEeeccCCCc-eEEEEEee
Q 010037 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDIREI-VSAVCYCP 480 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~D-----g~V~iwd~~~~~~~~~~~~~~~-V~~v~~sp 480 (519)
..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-......... ....+...
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 250 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV 250 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE
Confidence 458899999887665432 11111122222 57778887764 3689999988654432221111 11112223
Q ss_pred CCCEEEEEecCC-----eEEEEECCCCeeeecc
Q 010037 481 DGKGGIVGTMTG-----NCRFYDIKGMQIFDLS 508 (519)
Q Consensus 481 dg~~l~sgs~dg-----~v~iwdl~~~~l~~~~ 508 (519)
++++++.|+.++ .+.+||+.+++-..+.
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred CCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 777888887654 4899999988765554
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.03 E-value=12 Score=36.32 Aligned_cols=64 Identities=23% Similarity=0.284 Sum_probs=43.3
Q ss_pred ecCCCcEEEEEEeeC------CCCEEEEEeCCCeEEEEEcCCCcEEe---e-ccCCCceEEEEEeeCCCEEEEE
Q 010037 425 FSHNNYVTSVAFNPV------DDNYFISGSIDGKVRIWEVRRCQVVD---Y-TDIREIVSAVCYCPDGKGGIVG 488 (519)
Q Consensus 425 ~~h~~~V~~v~fsp~------d~~~l~sgs~Dg~V~iwd~~~~~~~~---~-~~~~~~V~~v~~spdg~~l~sg 488 (519)
+.+...+..+.|.+. ++.+|++.-..+.|...++..++.+. + ......+..+++.|||.++++.
T Consensus 267 ~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 267 WKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp ESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred eCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 344456788888641 36677777678888888887665442 2 1234578999999999865543
No 323
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.02 E-value=18 Score=38.30 Aligned_cols=115 Identities=5% Similarity=-0.027 Sum_probs=76.4
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCCeEEEEe-cCCCcEEEEEEeeCCCCEEEEEe-CCCeEEEEEcCCCcEE
Q 010037 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGIDRCLRVF-SHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRRCQVV 464 (519)
Q Consensus 389 ~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~~~~~~~-~h~~~V~~v~fsp~d~~~l~sgs-~Dg~V~iwd~~~~~~~ 464 (519)
.....|++.+.+ ++++-...+.|.+.++........+ ..-.....|+++|..+.++.+-. ..+.|...++......
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 346678887654 4555566788999998765433333 34456789999994454444431 2568888888765544
Q ss_pred eeccCCCceEEEEEeeCCCEEEEEe-cCCeEEEEECCCCe
Q 010037 465 DYTDIREIVSAVCYCPDGKGGIVGT-MTGNCRFYDIKGMQ 503 (519)
Q Consensus 465 ~~~~~~~~V~~v~~spdg~~l~sgs-~dg~v~iwdl~~~~ 503 (519)
.+...-...+.|+++++++.|..+. ..+.|..+|+.+..
T Consensus 160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 3334456678999999877776665 45779999987643
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.00 E-value=9.8 Score=35.79 Aligned_cols=95 Identities=14% Similarity=0.079 Sum_probs=56.2
Q ss_pred CcEEEEECCCCeEEEEec--CC-CcEEEEEEeeCCCCEEEEEeCC-----CeEEEEEcCCCcEEeecc---CCCceEEEE
Q 010037 409 KTVRLWQVGIDRCLRVFS--HN-NYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTD---IREIVSAVC 477 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~--h~-~~V~~v~fsp~d~~~l~sgs~D-----g~V~iwd~~~~~~~~~~~---~~~~V~~v~ 477 (519)
..+.+||+.+.+....-. .. ....++.+ ++.+++.|+.+ ..+.+||+.+.+-..... ......++.
T Consensus 137 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 213 (308)
T 1zgk_A 137 NSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV 213 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE
Confidence 468889998876654432 11 11122222 56777777654 458999998765443221 112222233
Q ss_pred EeeCCCEEEEEecC-----CeEEEEECCCCeeeecc
Q 010037 478 YCPDGKGGIVGTMT-----GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 478 ~spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~~ 508 (519)
+ ++++++.|+.+ ..+.+||+.+++-..+.
T Consensus 214 ~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 214 L--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp E--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred E--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 3 77778888765 46999999987765543
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.77 E-value=7.9 Score=37.26 Aligned_cols=57 Identities=11% Similarity=-0.036 Sum_probs=31.2
Q ss_pred eEEEEEcCCCcEEe---eccCCCceEEEEEeeCCCEEEEEecCC------eEEEEECCCCeeeecccc
Q 010037 452 KVRIWEVRRCQVVD---YTDIREIVSAVCYCPDGKGGIVGTMTG------NCRFYDIKGMQIFDLSTT 510 (519)
Q Consensus 452 ~V~iwd~~~~~~~~---~~~~~~~V~~v~~spdg~~l~sgs~dg------~v~iwdl~~~~l~~~~~~ 510 (519)
.+.+||+.+.+-.. .......-. +...++++++.|+.++ .|.++++.+++..+....
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 57889988754222 222222222 2335788888888653 466779988887766543
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.51 E-value=9.2 Score=44.28 Aligned_cols=219 Identities=13% Similarity=0.195 Sum_probs=120.2
Q ss_pred CCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccCCCCceEEEe
Q 010037 256 MRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQDTDPSCLYFT 335 (519)
Q Consensus 256 dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~ 335 (519)
..+|.|-|+......... .+.+ . +.-.+|..+.||-=. ..++.|+|+.+...++.+..... .++|.
T Consensus 47 ~~~vvIidl~~~~~~~rr-----pi~A-d----sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~---VvfWk 112 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR-----PISA-D----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD---VTFWK 112 (1630)
T ss_pred CceEEEEECCCCCCcccc-----cccc-h----hhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC---ceEEE
Confidence 347888888764432111 0111 1 223466666665544 67899999999887777766443 45555
Q ss_pred ecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeecc----CCCeeEEEEcCCC-e-EEEEe---
Q 010037 336 INHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGH----SSEVLDLSWSKNG-F-LLSSS--- 406 (519)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~V~~l~~sp~~-~-L~sgs--- 406 (519)
.-....+..+ .+..+..|+... ...|...+..| ...|..-..+++. + +++|-
T Consensus 113 Wis~~~l~lV----------------T~~aVyHW~~~~---~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 113 WISLNTVALV----------------TDNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred ecCCCeeEEE----------------cCCeEEEeccCC---CCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccC
Confidence 5444333222 122344444422 22444444444 4567777777777 4 34432
Q ss_pred ---CCCcEEEEECCCCeEEEEecCCCcEEEEEEe--eCCCCEEEEEeC---CCeEEEEEcCCC---------cEEee-cc
Q 010037 407 ---ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFN--PVDDNYFISGSI---DGKVRIWEVRRC---------QVVDY-TD 468 (519)
Q Consensus 407 ---~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fs--p~d~~~l~sgs~---Dg~V~iwd~~~~---------~~~~~-~~ 468 (519)
..|.+.+|.+..+.....-+|......+... +....+|+.+.. .++++|-++... +.+.. ..
T Consensus 174 ~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~ 253 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 253 (1630)
T ss_pred CCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCC
Confidence 4578888887765433222233332222221 101122222221 368999998543 11111 11
Q ss_pred ---CCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeeec
Q 010037 469 ---IREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFDL 507 (519)
Q Consensus 469 ---~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~~ 507 (519)
..+-..++..++.-..+..-+.-|.+++||+.++.++..
T Consensus 254 ~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 254 PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred cccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 123345677777777888889999999999999987643
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.70 E-value=12 Score=40.23 Aligned_cols=107 Identities=20% Similarity=0.217 Sum_probs=62.8
Q ss_pred CC-eEEEEeCCC--cEEEEECCCCeEEEEec------CCCcEEEEEEeeCCCCEEEEEeC--C-----CeEEEEEcCCCc
Q 010037 399 NG-FLLSSSADK--TVRLWQVGIDRCLRVFS------HNNYVTSVAFNPVDDNYFISGSI--D-----GKVRIWEVRRCQ 462 (519)
Q Consensus 399 ~~-~L~sgs~Dg--~V~lWdl~~~~~~~~~~------h~~~V~~v~fsp~d~~~l~sgs~--D-----g~V~iwd~~~~~ 462 (519)
++ .++.|+.++ .+.+||..+.+....-. ......++.+...++.+++.|+. + ..+.+||+.+.+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 44 556665443 79999999887655431 12222335556522667777765 2 468999998876
Q ss_pred ------EEeecc---CCCceEEEEEeeCCCEEEEEecC--------CeEEEEECCCCeee
Q 010037 463 ------VVDYTD---IREIVSAVCYCPDGKGGIVGTMT--------GNCRFYDIKGMQIF 505 (519)
Q Consensus 463 ------~~~~~~---~~~~V~~v~~spdg~~l~sgs~d--------g~v~iwdl~~~~l~ 505 (519)
-..... ....-.+++...++++++.|+.+ ..|.+||+.+++-.
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred cccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 111111 11111233344447888888753 45999999987654
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.59 E-value=33 Score=39.17 Aligned_cols=218 Identities=13% Similarity=0.065 Sum_probs=101.7
Q ss_pred CeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccC------CCEEEEEeC-CCcEEEEecccCeeec
Q 010037 248 HELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLD------GQYLASGGE-DGTVRVWKVIEHERLD 320 (519)
Q Consensus 248 ~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspd------g~~LaSgs~-Dg~I~iWd~~~~~~~~ 320 (519)
.+++.+. .+.|.++.+.... +.. ... ..-...|.|+++.|. ++++|.|.. |++|+|+++.+.+.+.
T Consensus 524 ~~vvva~-g~~l~~fel~~~~--L~~---~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~ 596 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQE--LRQ---ISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLH 596 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTE--EEE---EEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CEEEEEE-CCEEEEEEeeCCc--eee---ecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEE
Confidence 4555553 5667666665321 111 111 122567999999863 369999996 9999999998765544
Q ss_pred eeeccCC-CCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEE--EeCCccccccccceeEeeccCCCeeEEEEc
Q 010037 321 GFDVQDT-DPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCV--VLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (519)
Q Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 397 (519)
....... .+..+.+....... ....+-.++.+. .++.....+.... ..+-| ..++.-..+.
T Consensus 597 ~~~L~~~~~p~si~l~~~~~~~--------------~L~igl~dG~l~~~~~d~~tg~l~d~r-~~~LG-~~pv~L~~~~ 660 (1158)
T 3ei3_A 597 KEMLGGEIIPRSILMTTFESSH--------------YLLCALGDGALFYFGLNIETGLLSDRK-KVTLG-TQPTVLRTFR 660 (1158)
T ss_dssp EEECCSSCCEEEEEEEEETTEE--------------EEEEEETTSEEEEEEECTTTCCEEEEE-EEECC-SSCCEEEEEE
T ss_pred EEECCCCCCCcEEEEEEeCCCc--------------EEEEEeCCCeEEEEEEcCCCCccccce-eEEcC-CCceEEEEEe
Confidence 3333221 12222221111111 111111122221 1222111111111 11122 2333333333
Q ss_pred CCC--eEEEEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCC-CCEEEEEeCCCeEEEEEcCCCcE--EeeccCCCc
Q 010037 398 KNG--FLLSSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVD-DNYFISGSIDGKVRIWEVRRCQV--VDYTDIREI 472 (519)
Q Consensus 398 p~~--~L~sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d-~~~l~sgs~Dg~V~iwd~~~~~~--~~~~~~~~~ 472 (519)
..+ .++.++ +....+|--+..-....+....--....|+... .+-++..+ ++.++|..+.+-+. +........
T Consensus 661 ~~~~~~V~a~s-~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~T 738 (1158)
T 3ei3_A 661 SLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYES 738 (1158)
T ss_dssp SSSCEEEEEES-SSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSE
T ss_pred eCCceeEEEEC-CCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCC
Confidence 333 333333 344444443332222222222222333454311 23444433 55699998865332 245566778
Q ss_pred eEEEEEeeCCCEEEEEec
Q 010037 473 VSAVCYCPDGKGGIVGTM 490 (519)
Q Consensus 473 V~~v~~spdg~~l~sgs~ 490 (519)
+..++++|+.+.++++..
T Consensus 739 prri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 739 PRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp EEEEEEEGGGTEEEEEEE
T ss_pred ceEEEEcCCCCEEEEEEE
Confidence 999999999887776653
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.11 E-value=5.2 Score=38.81 Aligned_cols=98 Identities=9% Similarity=-0.040 Sum_probs=57.4
Q ss_pred eCCCcEEEEECCCCeEEEEec-----CCCcEEEEEEee-C-------CCCEEEEEeCCCeEEEEEcCCCcEEeeccCCCc
Q 010037 406 SADKTVRLWQVGIDRCLRVFS-----HNNYVTSVAFNP-V-------DDNYFISGSIDGKVRIWEVRRCQVVDYTDIREI 472 (519)
Q Consensus 406 s~Dg~V~lWdl~~~~~~~~~~-----h~~~V~~v~fsp-~-------d~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~~~~ 472 (519)
+.||.|..++..++.....+. ...++.. .=.| . .+..+++|+.+|++...|+++|+++.......+
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~ 142 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSK 142 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCB
T ss_pred CCCCEEEEEECCCCcEEeeeccccceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCC
Confidence 689999999988886554443 2233322 1011 0 356788999999999999999999854333221
Q ss_pred e------E--EEEEe-----eCCCEEEEEecCCeEEEEECCCCeee
Q 010037 473 V------S--AVCYC-----PDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 473 V------~--~v~~s-----pdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
. . +.... -.+..|+.+..+..+.+.+ ++++++
T Consensus 143 ~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~W 187 (339)
T 2be1_A 143 NGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGASY 187 (339)
T ss_dssp CC--------------------CCEEEEEEEEEECEECC-TTSCCC
T ss_pred cccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCCeE
Confidence 1 0 11110 1235677777777777766 344443
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.02 E-value=28 Score=37.50 Aligned_cols=115 Identities=11% Similarity=0.011 Sum_probs=73.8
Q ss_pred CCeeEEEEcCCCeEEEEeCCCcEEEEECCC------CeEE--EEec-----CCCcEEEEEEeeCCCCEEEEEeCCCeEEE
Q 010037 389 SEVLDLSWSKNGFLLSSSADKTVRLWQVGI------DRCL--RVFS-----HNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~------~~~~--~~~~-----h~~~V~~v~fsp~d~~~l~sgs~Dg~V~i 455 (519)
..|.++...+++.|..|+..+-|.++|..+ .... ..+. ....|.+|...+ ++++.+.++..+-|..
T Consensus 419 ~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~ 497 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDK 497 (758)
T ss_dssp SSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEE
T ss_pred ceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCCCcEE
Confidence 457788877888888888777788888543 1111 1221 234689999888 7877764333455888
Q ss_pred EEcCCCcEEeeccC----CCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 456 WEVRRCQVVDYTDI----REIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 456 wd~~~~~~~~~~~~----~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+|..+++...+... ...+.++....+|.+. .|+..| +..|+..+++...
T Consensus 498 ~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lW-igt~~G-l~~~~~~~~~~~~ 550 (758)
T 3ott_A 498 INPRTREVTKLFADELTGEKSPNYLLCDEDGLLW-VGFHGG-VMRINPKDESQQS 550 (758)
T ss_dssp EETTTTEEEEECTTTSCGGGCEEEEEECTTSCEE-EEETTE-EEEECC--CCCCB
T ss_pred EeCCCCceEEecCCCcCCCcccceEEECCCCCEE-EEecCc-eEEEecCCCceEE
Confidence 99988776654211 2457888888888754 556554 7888887665443
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.57 E-value=15 Score=34.17 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=61.2
Q ss_pred CC-eEEEEeCCC-----cEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCC-------CeEEEEEcCCCcE
Q 010037 399 NG-FLLSSSADK-----TVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-------GKVRIWEVRRCQV 463 (519)
Q Consensus 399 ~~-~L~sgs~Dg-----~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~D-------g~V~iwd~~~~~~ 463 (519)
++ .++.|+.++ .+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 44 555665443 57889998887655432 11111222222 56777776643 3588999987654
Q ss_pred Eeecc---CCCceEEEEEeeCCCEEEEEecC-----CeEEEEECCCCeeeecc
Q 010037 464 VDYTD---IREIVSAVCYCPDGKGGIVGTMT-----GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 464 ~~~~~---~~~~V~~v~~spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~~ 508 (519)
..... .......+. -++++++.|+.+ ..+.+||+.+++-..+.
T Consensus 186 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred EECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 43221 111222222 367788888765 36899999987655543
No 332
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=88.39 E-value=19 Score=34.93 Aligned_cols=85 Identities=12% Similarity=0.188 Sum_probs=57.8
Q ss_pred cceeEeeccCCCeeEEEEcCCC-eEEEEeCCCcEEEEECC-----CCeEEEEecC---CCcEEEEEEeeC-CCC-EEEEE
Q 010037 379 KPLHEFQGHSSEVLDLSWSKNG-FLLSSSADKTVRLWQVG-----IDRCLRVFSH---NNYVTSVAFNPV-DDN-YFISG 447 (519)
Q Consensus 379 ~~~~~~~~h~~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~-----~~~~~~~~~h---~~~V~~v~fsp~-d~~-~l~sg 447 (519)
+.++++.. .+.+-.+...+.. .|+.+-.+.-|..++.. +++.+..+.. ...+..|++-+. ++. ||++.
T Consensus 171 ~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS 249 (355)
T 3amr_A 171 KKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS 249 (355)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE
T ss_pred eEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE
Confidence 44555554 3567788888765 99999999777777755 4566666642 246888888541 334 66666
Q ss_pred e-CCCeEEEEEcC-CCcEE
Q 010037 448 S-IDGKVRIWEVR-RCQVV 464 (519)
Q Consensus 448 s-~Dg~V~iwd~~-~~~~~ 464 (519)
+ .+.++.+||.. +.+.+
T Consensus 250 sQG~~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 250 SQGNSSYAIYDRQGKNKYV 268 (355)
T ss_dssp EGGGTEEEEEESSTTCCEE
T ss_pred cCCCCEEEEEECCCCCcEE
Confidence 6 57799999997 45544
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.37 E-value=16 Score=42.45 Aligned_cols=240 Identities=10% Similarity=0.159 Sum_probs=124.1
Q ss_pred eecCCCCeEEeeecCCeEEEeeCCccccccccccccceeecCCCCEEEEEEccCCCEEEEEeCCCcEEEEecccCe-eec
Q 010037 242 TLKPGDHELTLGQRMRRVRVHPVKKQSRELSSLYTGQEFLAHEGSILTMKFSLDGQYLASGGEDGTVRVWKVIEHE-RLD 320 (519)
Q Consensus 242 ~~sp~g~~lasgs~dg~I~vw~~~~~~~~~~~~~~~~~l~~H~~~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~-~~~ 320 (519)
-.+|..+.+|.-. ..++.|+++....+.-+ +. ...+|.-=+|-.+ +.|+-.+ +..|..|++.... ..+
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks-------~~-~~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k 140 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKA-------HT-MTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVK 140 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhcc-------cc-cCCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHH
Confidence 4677777776654 68899999975443221 11 1345666677544 3455554 3479999996432 222
Q ss_pred eeeccCC--CCceEEEeecCCCCeEEe-eccCCceeeeeeeccCCCeeEEEeCCccccccccceeEeeccCCCeeEEEEc
Q 010037 321 GFDVQDT--DPSCLYFTINHLSQLIPI-DVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLEKPLHEFQGHSSEVLDLSWS 397 (519)
Q Consensus 321 ~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~s 397 (519)
.+..+.. ....+.+..+.......+ ..... .+...+.+.+++. ..+..+.+.||.+.-..+...
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~--------~~~v~G~mQLyS~-----er~~sQ~iegha~~F~~~~~~ 207 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ--------QNRVVGAMQLYSV-----DRKVSQPIEGHAASFAQFKME 207 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccC--------CCcccceeeeeec-----ccccchhhhHhHhhhheeccC
Confidence 2222211 122222333322222211 11000 0111222222222 223334456665544333332
Q ss_pred CC---C-eEEEEeC---CCcEEEEECCCC---e------EEEEe-c---CCCcEEEEEEeeCCCCEEEEEeCCCeEEEEE
Q 010037 398 KN---G-FLLSSSA---DKTVRLWQVGID---R------CLRVF-S---HNNYVTSVAFNPVDDNYFISGSIDGKVRIWE 457 (519)
Q Consensus 398 p~---~-~L~sgs~---Dg~V~lWdl~~~---~------~~~~~-~---h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd 457 (519)
.+ . .++.+.. .+.++|-++... . .+..+ . ..+...++..++ ....+..-+.-|.|.+||
T Consensus 208 ~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~~~~~d 286 (1630)
T 1xi4_A 208 GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYD 286 (1630)
T ss_pred CCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCceEEEEe
Confidence 11 1 2222221 267888887543 1 11111 1 245566788888 677788888899999999
Q ss_pred cCCCcEEee-ccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCCeeee
Q 010037 458 VRRCQVVDY-TDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGMQIFD 506 (519)
Q Consensus 458 ~~~~~~~~~-~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~~l~~ 506 (519)
+.++.++.. .-....|...+.......++.....|.|.--.+....++.
T Consensus 287 ~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~ 336 (1630)
T 1xi4_A 287 LETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 336 (1630)
T ss_pred cccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence 999988832 2234455555555554556666678877777776665543
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.89 E-value=0.49 Score=46.13 Aligned_cols=107 Identities=7% Similarity=-0.006 Sum_probs=66.9
Q ss_pred CCeEEEEeCCCcEEEEECCCCeEEEEecCC--CcEEEEEEe--eCCCCEEEEE-eCCCeEEEEEcCCCcEEeecc-----
Q 010037 399 NGFLLSSSADKTVRLWQVGIDRCLRVFSHN--NYVTSVAFN--PVDDNYFISG-SIDGKVRIWEVRRCQVVDYTD----- 468 (519)
Q Consensus 399 ~~~L~sgs~Dg~V~lWdl~~~~~~~~~~h~--~~V~~v~fs--p~d~~~l~sg-s~Dg~V~iwd~~~~~~~~~~~----- 468 (519)
++.++.++.||.|.-+|..+|+.+-.+... .++....-. +.++..++.. +.||.|..++..++.......
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 348899999999999999999999888643 222221110 1122333333 589999999998874431111
Q ss_pred CCCceEE---EEE-e----eCCCEEEEEecCCeEEEEECCCCeee
Q 010037 469 IREIVSA---VCY-C----PDGKGGIVGTMTGNCRFYDIKGMQIF 505 (519)
Q Consensus 469 ~~~~V~~---v~~-s----pdg~~l~sgs~dg~v~iwdl~~~~l~ 505 (519)
...++.. ... . -.+..+++|+.+|.+...|+.+|+++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 1111111 000 0 04457889999999999999988754
No 335
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.70 E-value=30 Score=36.41 Aligned_cols=114 Identities=7% Similarity=-0.023 Sum_probs=71.8
Q ss_pred CeeEEEEcCC-C-eEEEEeCCCcEEEEECCCCeEEEEec-CCCcEEEEEEeeCCCCEEEEEeC-CCeEEEEEcCCCcEEe
Q 010037 390 EVLDLSWSKN-G-FLLSSSADKTVRLWQVGIDRCLRVFS-HNNYVTSVAFNPVDDNYFISGSI-DGKVRIWEVRRCQVVD 465 (519)
Q Consensus 390 ~V~~l~~sp~-~-~L~sgs~Dg~V~lWdl~~~~~~~~~~-h~~~V~~v~fsp~d~~~l~sgs~-Dg~V~iwd~~~~~~~~ 465 (519)
....|++.+. + ++++-+..+.|.+.++........+. .-.....|+++|..+.++.+-.. .+.|...++.......
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~ 472 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVV 472 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEE
Confidence 4456777753 3 55555667889998887654333332 34568999999944555554322 3677777776543322
Q ss_pred e-ccCCCceEEEEEeeCCCEEEEEec-CCeEEEEECCCCe
Q 010037 466 Y-TDIREIVSAVCYCPDGKGGIVGTM-TGNCRFYDIKGMQ 503 (519)
Q Consensus 466 ~-~~~~~~V~~v~~spdg~~l~sgs~-dg~v~iwdl~~~~ 503 (519)
+ ...-...+.|++.+++..|..+.. .+.|..+++.+..
T Consensus 473 l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 473 LVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG 512 (619)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred EEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc
Confidence 2 223456789999987777766654 4678889886543
No 336
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.77 E-value=21 Score=33.70 Aligned_cols=99 Identities=8% Similarity=0.028 Sum_probs=50.5
Q ss_pred EcCCC-eEE-EEeCCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeCC--CeEEEEEcCCCcEEeeccCCC
Q 010037 396 WSKNG-FLL-SSSADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSID--GKVRIWEVRRCQVVDYTDIRE 471 (519)
Q Consensus 396 ~sp~~-~L~-sgs~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~D--g~V~iwd~~~~~~~~~~~~~~ 471 (519)
+++.+ .|+ +.....+|.+-++..+.....+... .. ..+.| ++.+|+-.... ..|..-++.......+.. .
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~--~~-~~~~P-~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~--~ 225 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN--CY-KPVVL-DDTNVYYMDVNRDNAIVHVNINNPNPVVLTE--A 225 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC--EE-EEEEE-ETTEEEEEEGGGTTEEEEECSSSCCCEECSC--S
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC--cc-ceeee-cCCEEEEEEcCCCcEEEEEECCCCCeEEEeC--C
Confidence 34445 333 3333567777777766555444322 22 23557 56666654433 356666666554333322 1
Q ss_pred ceEEEEEeeCCCEEEEEec--CCeEEEEECCCC
Q 010037 472 IVSAVCYCPDGKGGIVGTM--TGNCRFYDIKGM 502 (519)
Q Consensus 472 ~V~~v~~spdg~~l~sgs~--dg~v~iwdl~~~ 502 (519)
.+ ..|+|+|.+|.-++. .+.|..-++.+.
T Consensus 226 ~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 226 NI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp CE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred Cc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 22 347777777765432 345555555544
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=86.77 E-value=7.6 Score=39.31 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=61.1
Q ss_pred CCCeeEEEEcCCCeEEEEeCCC-cEEEEECCCCeEE--EEec-------CCCcEEEEEEeeCC---CCEEEEEe-C----
Q 010037 388 SSEVLDLSWSKNGFLLSSSADK-TVRLWQVGIDRCL--RVFS-------HNNYVTSVAFNPVD---DNYFISGS-I---- 449 (519)
Q Consensus 388 ~~~V~~l~~sp~~~L~sgs~Dg-~V~lWdl~~~~~~--~~~~-------h~~~V~~v~fsp~d---~~~l~sgs-~---- 449 (519)
-...+.|+|.|+|.|+.+...+ .|++++..+++.. ..+. .......|+|+| + +.+|.... .
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P-df~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP-DFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT-TTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC-CcCcCCEEEEEEeccccC
Confidence 4467899999999666666665 6888886555432 2222 134677999999 4 44444333 2
Q ss_pred --------CCeEEEEEcCCC-------cEE-e-ec-cCCCceEEEEEeeCCCEEEEEec
Q 010037 450 --------DGKVRIWEVRRC-------QVV-D-YT-DIREIVSAVCYCPDGKGGIVGTM 490 (519)
Q Consensus 450 --------Dg~V~iwd~~~~-------~~~-~-~~-~~~~~V~~v~~spdg~~l~sgs~ 490 (519)
...|.-|++... +.+ . +. ........|+|.|||.+.++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 134555554321 111 1 11 11234788999999987776543
No 338
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=86.74 E-value=20 Score=33.37 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=59.4
Q ss_pred eEEEEeCC------CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeC---------CCeEEEEEcCCCcE
Q 010037 401 FLLSSSAD------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSI---------DGKVRIWEVRRCQV 463 (519)
Q Consensus 401 ~L~sgs~D------g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~---------Dg~V~iwd~~~~~~ 463 (519)
.++.|+.+ ..+.+||..+.+....-. ....-.+++.. ++.+++.|+. -..+.+||+.+.+-
T Consensus 104 iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 104 IYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp EEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred EEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 45555543 468899998887655432 11111122222 5667777653 34588999988754
Q ss_pred EeeccCC---CceEEEEEeeCCCEEEEEecC-----CeEEEEECCCCeeeecc
Q 010037 464 VDYTDIR---EIVSAVCYCPDGKGGIVGTMT-----GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 464 ~~~~~~~---~~V~~v~~spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~~ 508 (519)
....... ..-..+. -++++++.|+.+ ..+.+||+.+++-..+.
T Consensus 182 ~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 182 TELCPMIEARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred EECCCccchhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 4332211 1122222 277777777754 35899999987655543
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.55 E-value=24 Score=33.12 Aligned_cols=95 Identities=13% Similarity=0.167 Sum_probs=55.0
Q ss_pred CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCC-----CeEEEEEcCCCcEEeeccC---CCceEEEEE
Q 010037 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSID-----GKVRIWEVRRCQVVDYTDI---REIVSAVCY 478 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~D-----g~V~iwd~~~~~~~~~~~~---~~~V~~v~~ 478 (519)
..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-...... ...... .
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~ 250 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL--V 250 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE--E
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE--E
Confidence 458999999887655432 11111122222 56777777653 3578899887654432221 111222 2
Q ss_pred eeCCCEEEEEecC--------------CeEEEEECCCCeeeec
Q 010037 479 CPDGKGGIVGTMT--------------GNCRFYDIKGMQIFDL 507 (519)
Q Consensus 479 spdg~~l~sgs~d--------------g~v~iwdl~~~~l~~~ 507 (519)
..++++++.|+.+ ..+.+||+.+++-..+
T Consensus 251 ~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 251 SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 3467777887754 3588999988765444
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.28 E-value=57 Score=36.34 Aligned_cols=38 Identities=11% Similarity=0.344 Sum_probs=32.8
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec
Q 010037 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS 426 (519)
Q Consensus 389 ~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~ 426 (519)
..+.+++..++. ++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 357778887777 99999999999999999999998763
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=81.06 E-value=36 Score=31.83 Aligned_cols=95 Identities=17% Similarity=0.181 Sum_probs=54.3
Q ss_pred cEEEEECCCCeEEEEecCCCcE--EEEEEeeCCCCEEEEEeC------CCeEEEEEcCCCcEEeeccC---CCceEEEEE
Q 010037 410 TVRLWQVGIDRCLRVFSHNNYV--TSVAFNPVDDNYFISGSI------DGKVRIWEVRRCQVVDYTDI---REIVSAVCY 478 (519)
Q Consensus 410 ~V~lWdl~~~~~~~~~~h~~~V--~~v~fsp~d~~~l~sgs~------Dg~V~iwd~~~~~~~~~~~~---~~~V~~v~~ 478 (519)
.+.+||+.+.+....-...... .+++. . ++.+++.|+. -..+.+||+.+.+-...... .....++.
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 204 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI- 204 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEE-E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-
Confidence 4788899888765543211111 12222 2 6777777764 23589999988754332221 11122222
Q ss_pred eeCCCEEEEEecC-----CeEEEEECCCCeeeecc
Q 010037 479 CPDGKGGIVGTMT-----GNCRFYDIKGMQIFDLS 508 (519)
Q Consensus 479 spdg~~l~sgs~d-----g~v~iwdl~~~~l~~~~ 508 (519)
-++++++.|+.+ ..+.+||+.+++-..+.
T Consensus 205 -~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 205 -HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp -ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred -ECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 367777887754 35789999887655443
No 342
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=80.13 E-value=0.91 Score=28.77 Aligned_cols=21 Identities=38% Similarity=0.665 Sum_probs=16.7
Q ss_pred CCCcccccccccccccccccC
Q 010037 3 GVSNEEEEEQFFDTCEEISYV 23 (519)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (519)
-.++|+||-+|||+.+=|..+
T Consensus 11 e~SdEDed~EfFDA~efITv~ 31 (47)
T 2rr3_B 11 DMSDEDDENEFFDAPEIITMP 31 (47)
T ss_dssp CSCCCCCSSCCBCCCSSCSSC
T ss_pred cccccccccccccccceeEcc
Confidence 356788899999999877654
No 343
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=80.01 E-value=39 Score=31.55 Aligned_cols=103 Identities=7% Similarity=0.113 Sum_probs=60.1
Q ss_pred eEEEEeC-C-----CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCC-----eEEEEEcCCCcEEeec
Q 010037 401 FLLSSSA-D-----KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDG-----KVRIWEVRRCQVVDYT 467 (519)
Q Consensus 401 ~L~sgs~-D-----g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg-----~V~iwd~~~~~~~~~~ 467 (519)
.++.|+. + ..+.+||+.+.+....-. ....-.+++.. ++.+++.|+.++ .+.+||+.+.+-....
T Consensus 151 iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 151 VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp EEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred EEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 5556654 2 468999999886654432 11111122222 567778877654 5889999887544332
Q ss_pred cC---CCceEEEEEeeCCCEEEEEecCC--------------eEEEEECCCCeeeec
Q 010037 468 DI---REIVSAVCYCPDGKGGIVGTMTG--------------NCRFYDIKGMQIFDL 507 (519)
Q Consensus 468 ~~---~~~V~~v~~spdg~~l~sgs~dg--------------~v~iwdl~~~~l~~~ 507 (519)
.. ......+ .-++++++.|+.++ .+.+||+.+++-..+
T Consensus 229 ~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 229 AFPQERSSLSLV--SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp CCSSCCBSCEEE--EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CCCCcccceeEE--EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 21 1122222 23777788887642 478999988765444
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=79.38 E-value=6.3 Score=40.86 Aligned_cols=114 Identities=16% Similarity=0.151 Sum_probs=76.1
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCC------e-------EEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeE
Q 010037 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGID------R-------CLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKV 453 (519)
Q Consensus 389 ~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~------~-------~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V 453 (519)
.....+..+|+| .++++-.+.+|.++|+..- + ......-.-.....+|.+ +|+...+...|.+|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeeecceE
Confidence 445678899999 4455567899999998741 1 123333555678899999 88666777789999
Q ss_pred EEEEcCCC----------cEEeeccCCCceEEEEE------eeCCCEEEEEec---CC----------eEEEEECCCCe
Q 010037 454 RIWEVRRC----------QVVDYTDIREIVSAVCY------CPDGKGGIVGTM---TG----------NCRFYDIKGMQ 503 (519)
Q Consensus 454 ~iwd~~~~----------~~~~~~~~~~~V~~v~~------spdg~~l~sgs~---dg----------~v~iwdl~~~~ 503 (519)
..|++... .++........+-.+.- .|||++|++... |. +-.++|+.+.+
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGdk 480 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGDE 480 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSSS
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCCc
Confidence 99998653 34444443344444444 579999998753 33 23677776544
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.65 E-value=29 Score=38.70 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=30.4
Q ss_pred cEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCcEEe
Q 010037 430 YVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQVVD 465 (519)
Q Consensus 430 ~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~~ 465 (519)
.+.+++..+ +..++++-+.|+++|||++.+++++.
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEe
Confidence 567777777 78899999999999999999998774
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=75.35 E-value=53 Score=30.59 Aligned_cols=96 Identities=14% Similarity=0.156 Sum_probs=56.9
Q ss_pred CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeC-C-----CeEEEEEcCCCcEEeeccC---CCceEEEE
Q 010037 409 KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSI-D-----GKVRIWEVRRCQVVDYTDI---REIVSAVC 477 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~-D-----g~V~iwd~~~~~~~~~~~~---~~~V~~v~ 477 (519)
..+.+||..+.+....-. ....-.+++. - ++.+++.|+. + ..+.+||+.+.+-...... ...-.++
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~- 193 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLS-H-MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT- 193 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-E-TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEE-E-CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE-
Confidence 458999999887554332 1111122222 2 5677777775 2 3689999988654332221 1112222
Q ss_pred EeeCCCEEEEEecCC-----eEEEEECCCCeeeecc
Q 010037 478 YCPDGKGGIVGTMTG-----NCRFYDIKGMQIFDLS 508 (519)
Q Consensus 478 ~spdg~~l~sgs~dg-----~v~iwdl~~~~l~~~~ 508 (519)
.-++++++.|+.++ .+.+||+.+++-..+.
T Consensus 194 -~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 194 -VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp -EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred -EECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 23778888888754 5899999987655554
No 347
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=73.13 E-value=62 Score=30.40 Aligned_cols=105 Identities=11% Similarity=0.067 Sum_probs=59.5
Q ss_pred EEcCCC-eEEEEe----CCCcEEEEECCCCeEEEEecCCCcEEEEEEeeCCCCEEEEEeC-CCeEEEEEcCCCcEEeecc
Q 010037 395 SWSKNG-FLLSSS----ADKTVRLWQVGIDRCLRVFSHNNYVTSVAFNPVDDNYFISGSI-DGKVRIWEVRRCQVVDYTD 468 (519)
Q Consensus 395 ~~sp~~-~L~sgs----~Dg~V~lWdl~~~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~-Dg~V~iwd~~~~~~~~~~~ 468 (519)
.|++++ .|+-.. ....|..-++......+...+.. ..|+| +++.|+-.+. ..+|.+.++..+....+..
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~ 184 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTASQSEALFYD 184 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEE-ETTEEEEECTTTCCEEEEETTTTEEEEEEC
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeE-ECCEEEEEeCCCceEEEEECCCCCEEEEeC
Confidence 455666 554443 34455555666544444444432 45678 6666665554 6788888887765443322
Q ss_pred CCCceEEEEEeeCCCEEEEEecC--CeEEEEECCCCeeeec
Q 010037 469 IREIVSAVCYCPDGKGGIVGTMT--GNCRFYDIKGMQIFDL 507 (519)
Q Consensus 469 ~~~~V~~v~~spdg~~l~sgs~d--g~v~iwdl~~~~l~~~ 507 (519)
+... ..+.|++.+|+-.... ..|..-++.+.....+
T Consensus 185 --~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L 222 (302)
T 3s25_A 185 --CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL 222 (302)
T ss_dssp --SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC
T ss_pred --CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE
Confidence 2222 3466988888766543 3566666666554433
No 348
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=70.79 E-value=78 Score=30.52 Aligned_cols=244 Identities=14% Similarity=0.113 Sum_probs=114.9
Q ss_pred ccceeecCCCCeEEeeecCCeEEEeeCCccccc-cccccccceeecCCCCEEEEEEccC---CCEEEEE---eCCCcEEE
Q 010037 238 HGSATLKPGDHELTLGQRMRRVRVHPVKKQSRE-LSSLYTGQEFLAHEGSILTMKFSLD---GQYLASG---GEDGTVRV 310 (519)
Q Consensus 238 ~~~~~~sp~g~~lasgs~dg~I~vw~~~~~~~~-~~~~~~~~~l~~H~~~I~~l~fspd---g~~LaSg---s~Dg~I~i 310 (519)
...++|.|+|.++++-...|+|++++....... +..+ ...+....+....|+|+|+ +.+|... ..+..|.-
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~--~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEV--PGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC--TTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeeccc--CceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 345899999997777655899999875433321 1111 0112234567899999995 3344332 23444555
Q ss_pred EecccCe----e----e---ceeec-cCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeEEEeCCccccccc
Q 010037 311 WKVIEHE----R----L---DGFDV-QDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTCVVLPPKVFRLLE 378 (519)
Q Consensus 311 Wd~~~~~----~----~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 378 (519)
|.+..+. . . ..+.. ..+....+.|.++. .++...-+........ -.....+.++.+++..--...
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG--~Lyvt~Gd~~~~~~~q-d~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK--MLYAGTGESGDTGLSQ-DRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS--CEEEECBCTTCGGGTT-CTTCSTTCEEEECTTSSBCTT
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC--CEEEEECCCCCCcccc-CCCCCCCEEEEEeCCCCccCC
Confidence 5554321 0 0 01110 11112233443332 2222111110000000 001123344444432110000
Q ss_pred cc---eeE-eeccCCCeeEEEEcCCCeEEEEeC--CCcEEEEECCCC------------------eEEEEecCC-CcEEE
Q 010037 379 KP---LHE-FQGHSSEVLDLSWSKNGFLLSSSA--DKTVRLWQVGID------------------RCLRVFSHN-NYVTS 433 (519)
Q Consensus 379 ~~---~~~-~~~h~~~V~~l~~sp~~~L~sgs~--Dg~V~lWdl~~~------------------~~~~~~~h~-~~V~~ 433 (519)
.+ ... -.+|. ....++|+|++.|.++-. |+.-.|--+..+ .++..+.+. .....
T Consensus 189 nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G 267 (347)
T 3das_A 189 NPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSG 267 (347)
T ss_dssp CSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEE
T ss_pred CCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcc
Confidence 00 011 23443 456899999885555432 332223222221 122333322 35677
Q ss_pred EEEeeCCCCEEEEEeCCCeEEEEEcCCCcEE----e-eccCCCceEEEEEeeCCCEEEEEe
Q 010037 434 VAFNPVDDNYFISGSIDGKVRIWEVRRCQVV----D-YTDIREIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 434 v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~~~----~-~~~~~~~V~~v~~spdg~~l~sgs 489 (519)
++|. ++.+|+..-..+.|....+.....+ . +.+....+..|+..|||.++++-.
T Consensus 268 ~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 268 IAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred eEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 7776 4666666666667766676554321 1 233456799999999998666544
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=66.02 E-value=79 Score=31.82 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=61.5
Q ss_pred CCeeEEEEcCCC--eEEEEeCCCcEEEEECCCC---eEEEEec----C------CCcEEEEEEeeC---CCCEEEEEeC-
Q 010037 389 SEVLDLSWSKNG--FLLSSSADKTVRLWQVGID---RCLRVFS----H------NNYVTSVAFNPV---DDNYFISGSI- 449 (519)
Q Consensus 389 ~~V~~l~~sp~~--~L~sgs~Dg~V~lWdl~~~---~~~~~~~----h------~~~V~~v~fsp~---d~~~l~sgs~- 449 (519)
...+.|+|.|++ .|+.+...|.|++++.... ..+..+. . ......|+|+|. ++.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 456899999998 5888889999999975432 1222221 1 356889999992 2444444332
Q ss_pred -C----------CeEEEEEcCC----------CcEE-eec--cCCCceEEEEEeeCCCEEEEEecC
Q 010037 450 -D----------GKVRIWEVRR----------CQVV-DYT--DIREIVSAVCYCPDGKGGIVGTMT 491 (519)
Q Consensus 450 -D----------g~V~iwd~~~----------~~~~-~~~--~~~~~V~~v~~spdg~~l~sgs~d 491 (519)
+ ..|.-|.+.. .+++ ... ........|+|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455532 1222 221 222346789999999877765543
No 350
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=65.74 E-value=85 Score=29.05 Aligned_cols=99 Identities=10% Similarity=0.098 Sum_probs=60.1
Q ss_pred eEEEEeCCCcEEEEECCC---------CeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC-------c-E
Q 010037 401 FLLSSSADKTVRLWQVGI---------DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC-------Q-V 463 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWdl~~---------~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~-------~-~ 463 (519)
.++..+..|.+..+.... |.....+.....|..+...+ ++.+++..+..|.++...+..- + .
T Consensus 129 ~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv 207 (276)
T 3no0_A 129 HILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWN-GEPYLLVITAKGRVKKISHEEIPKTNRGVKGT 207 (276)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCE
T ss_pred EEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHcccCCCCCcce
Confidence 666777777776665421 22222233456666666555 5678889999999999886432 1 2
Q ss_pred EeeccCCCceEEEEEeeCCCEEEEEecCCeEEE--EECCC
Q 010037 464 VDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRF--YDIKG 501 (519)
Q Consensus 464 ~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~i--wdl~~ 501 (519)
... ...+.+..+....+...++..+.+|.+.. +++..
T Consensus 208 ~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 208 EVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 222 33444555444344456777888898887 87654
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=62.31 E-value=70 Score=30.31 Aligned_cols=94 Identities=11% Similarity=0.119 Sum_probs=52.3
Q ss_pred CcEEEEECCCCeEEEEecCC----CcEEEEEEeeCCCCEEEEEeCC----------------------------------
Q 010037 409 KTVRLWQVGIDRCLRVFSHN----NYVTSVAFNPVDDNYFISGSID---------------------------------- 450 (519)
Q Consensus 409 g~V~lWdl~~~~~~~~~~h~----~~V~~v~fsp~d~~~l~sgs~D---------------------------------- 450 (519)
..+.+||+.+.+....-... ....++. . ++.+++.|+.+
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAE 162 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEE--E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGG
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEE--E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccccc
Confidence 46899999988765543211 1122222 3 67888888765
Q ss_pred -----CeEEEEEcCCCcEEeeccCC--Cce-EEEEEeeCCCEEEEEec------CCeEEEEEC--CCCeeee
Q 010037 451 -----GKVRIWEVRRCQVVDYTDIR--EIV-SAVCYCPDGKGGIVGTM------TGNCRFYDI--KGMQIFD 506 (519)
Q Consensus 451 -----g~V~iwd~~~~~~~~~~~~~--~~V-~~v~~spdg~~l~sgs~------dg~v~iwdl--~~~~l~~ 506 (519)
..+.+||+.+.+-....... ..- .+++ .-++++++.|+. ...+.+||+ .+.+-..
T Consensus 163 ~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~ 233 (357)
T 2uvk_A 163 DYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVV-NKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK 233 (357)
T ss_dssp GGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEE-EETTEEEEECCEEETTEECCCEEEEECC---CEEEE
T ss_pred ccCCcccEEEEeCCCCcEEECCCCCCCCcccccEE-EECCEEEEEeeecCCCcccCceEEEEecCCCCcEEe
Confidence 57999999876533222111 111 1222 236677777764 345778887 5554433
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.12 E-value=96 Score=35.26 Aligned_cols=38 Identities=11% Similarity=0.344 Sum_probs=31.9
Q ss_pred CCeeEEEEcCCC-eEEEEeCCCcEEEEECCCCeEEEEec
Q 010037 389 SEVLDLSWSKNG-FLLSSSADKTVRLWQVGIDRCLRVFS 426 (519)
Q Consensus 389 ~~V~~l~~sp~~-~L~sgs~Dg~V~lWdl~~~~~~~~~~ 426 (519)
..+.+++..++. ++++-+.|+++|+|++.+++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 355666777766 99999999999999999999998864
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=58.91 E-value=1.3e+02 Score=28.72 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=61.6
Q ss_pred eEEEEeCCCcEEEEECC--C---------CeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCCc-------
Q 010037 401 FLLSSSADKTVRLWQVG--I---------DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRCQ------- 462 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWdl~--~---------~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~~------- 462 (519)
.|+..+..|.+..+.+. . |.....+.....|.++...+ .+.+++..+..|.++.-.+..-.
T Consensus 159 ~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~ 237 (327)
T 3uc1_A 159 DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGK 237 (327)
T ss_dssp EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred EEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCC
Confidence 66667777777766655 2 12222233556677776665 56789999999999988764321
Q ss_pred -EE--eeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 463 -VV--DYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 463 -~~--~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
+. .+....+.+-.+....+...++..+.+|.+.-+++..
T Consensus 238 G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 238 GVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred cEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 11 2222234455554444556777888888888887653
No 354
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=56.73 E-value=52 Score=35.12 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=62.9
Q ss_pred CC-eEEEEeCC------CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEeCCC--eEEEEEcCCCcEEeec
Q 010037 399 NG-FLLSSSAD------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGSIDG--KVRIWEVRRCQVVDYT 467 (519)
Q Consensus 399 ~~-~L~sgs~D------g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs~Dg--~V~iwd~~~~~~~~~~ 467 (519)
++ .++.|+.+ ..+.+||..+.+....-. ....-.+++.-. ++.+++.|+.++ .+.+||+.+.+-....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 45 55555533 358899999876654432 111122233323 678888887654 6999999886543322
Q ss_pred c------CCCceEEEEEeeC-CCEEEEEec--C-----CeEEEEECCCCe
Q 010037 468 D------IREIVSAVCYCPD-GKGGIVGTM--T-----GNCRFYDIKGMQ 503 (519)
Q Consensus 468 ~------~~~~V~~v~~spd-g~~l~sgs~--d-----g~v~iwdl~~~~ 503 (519)
. ......++.+..+ +++++.|+. + ..+.+||+.+++
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1 2222344566655 677777776 2 458999998877
No 355
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=54.23 E-value=23 Score=36.79 Aligned_cols=91 Identities=9% Similarity=0.115 Sum_probs=63.8
Q ss_pred cEEEEECCC----C-eEEEEecCCCcEEEEEEeeCCCCEEEEEe-CCCeEEEEEcCCC------cE-------EeeccCC
Q 010037 410 TVRLWQVGI----D-RCLRVFSHNNYVTSVAFNPVDDNYFISGS-IDGKVRIWEVRRC------QV-------VDYTDIR 470 (519)
Q Consensus 410 ~V~lWdl~~----~-~~~~~~~h~~~V~~v~fsp~d~~~l~sgs-~Dg~V~iwd~~~~------~~-------~~~~~~~ 470 (519)
.|.+.|.+. + ..+..+.-......+.++| +|.+++.++ .+.+|.|+|+.+- ++ +......
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 477777765 2 2334444445566789999 898887766 5889999998742 21 2233345
Q ss_pred CceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 471 EIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 471 ~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
-.....+|.++|....+--.|..|.-|++..
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 5577899999996666667899999999864
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=48.73 E-value=1.2e+02 Score=29.20 Aligned_cols=108 Identities=9% Similarity=-0.040 Sum_probs=54.8
Q ss_pred CCeeEEEEcC--CCeEEEEeCCC----cEEEEECCCCeEEEEec---------------CCCcEEEEEEeeCC-CCEEEE
Q 010037 389 SEVLDLSWSK--NGFLLSSSADK----TVRLWQVGIDRCLRVFS---------------HNNYVTSVAFNPVD-DNYFIS 446 (519)
Q Consensus 389 ~~V~~l~~sp--~~~L~sgs~Dg----~V~lWdl~~~~~~~~~~---------------h~~~V~~v~fsp~d-~~~l~s 446 (519)
..|.+|++.| .+.|+.++..+ .|...+ ..++.-..+. ....|.+|++.|.+ ...+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4588999998 44555555444 343332 2222111111 11257889998744 455666
Q ss_pred EeCCCeEEEEEcCCC--cEEe-ec----------------cCCCceEEEEEeeC-CCEEEEEecCCeEEEE
Q 010037 447 GSIDGKVRIWEVRRC--QVVD-YT----------------DIREIVSAVCYCPD-GKGGIVGTMTGNCRFY 497 (519)
Q Consensus 447 gs~Dg~V~iwd~~~~--~~~~-~~----------------~~~~~V~~v~~spd-g~~l~sgs~dg~v~iw 497 (519)
+...+.|...+-... +.+. .. .....+.+|.+.|. ...|+++..++.|...
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 555565554432211 2221 10 11235788999883 4456666555554443
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.70 E-value=2.3e+02 Score=30.26 Aligned_cols=36 Identities=6% Similarity=0.253 Sum_probs=29.4
Q ss_pred CeeEEEEcCCCeEEEEeCCCcEEEEECCCCeEEEEec
Q 010037 390 EVLDLSWSKNGFLLSSSADKTVRLWQVGIDRCLRVFS 426 (519)
Q Consensus 390 ~V~~l~~sp~~~L~sgs~Dg~V~lWdl~~~~~~~~~~ 426 (519)
.|.++.+ ++.+|++-+.|+++|+|++.+++++.+..
T Consensus 223 ~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF-HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc-CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4555554 34599999999999999999999988775
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.43 E-value=16 Score=41.73 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=34.4
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeeccC
Q 010037 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDVQD 326 (519)
Q Consensus 286 ~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~~~ 326 (519)
.|.+++..++..+|++-+.|+++|||++.+++++.+.....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~ 279 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 279 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhh
Confidence 45566777788999999999999999999999988776543
No 359
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=39.31 E-value=2.5e+02 Score=26.52 Aligned_cols=100 Identities=12% Similarity=0.109 Sum_probs=67.7
Q ss_pred eEEEEeCCCcEEEEECCCC-------eEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcC--CCcE-------E
Q 010037 401 FLLSSSADKTVRLWQVGID-------RCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVR--RCQV-------V 464 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWdl~~~-------~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~--~~~~-------~ 464 (519)
.+++.+.+|.|+--.+..- .....+...+.+..+.... ....++..+..|.+..+.+. .-.. +
T Consensus 111 ~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv 189 (327)
T 3uc1_A 111 YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRATSGV 189 (327)
T ss_dssp EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCE
T ss_pred EEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcCCCCe
Confidence 9999999999998876432 2222233456666666655 56678888889998888776 3111 1
Q ss_pred e--eccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 465 D--YTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 465 ~--~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
. .....+.|.++...+++..|+..+..|.++.-.+..
T Consensus 190 ~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 190 QGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp ESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 1 122345677776666777899999999998887653
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=39.12 E-value=39 Score=36.15 Aligned_cols=37 Identities=16% Similarity=0.430 Sum_probs=30.9
Q ss_pred CEEEEEEccCCCEEEEEeCCCcEEEEecccCeeeceeec
Q 010037 286 SILTMKFSLDGQYLASGGEDGTVRVWKVIEHERLDGFDV 324 (519)
Q Consensus 286 ~I~~l~fspdg~~LaSgs~Dg~I~iWd~~~~~~~~~~~~ 324 (519)
.|.++.+ +..+|++-+.|+++|+|++.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4665555 467999999999999999999998877766
No 361
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=38.21 E-value=3.2e+02 Score=27.30 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=34.9
Q ss_pred ecccceeecCCCC-eEEeeecCCeEEEeeCCccc--cccccccccceee----cCCCCEEEEEEccC
Q 010037 236 DRHGSATLKPGDH-ELTLGQRMRRVRVHPVKKQS--RELSSLYTGQEFL----AHEGSILTMKFSLD 295 (519)
Q Consensus 236 ~~~~~~~~sp~g~-~lasgs~dg~I~vw~~~~~~--~~~~~~~~~~~l~----~H~~~I~~l~fspd 295 (519)
+.-..++|.|+|. .|+++.+.|.|++++..... ..+..+... ... ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~-~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKL-VQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTT-BCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcce-eccCccccCCCcceeeEeCCC
Confidence 3344689999996 56666788999999754221 111111100 011 12567889999996
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=36.40 E-value=1.1e+02 Score=31.71 Aligned_cols=60 Identities=17% Similarity=0.243 Sum_probs=42.6
Q ss_pred CcEEEEEEeeCCCCEEEEEeC------------CCeEEEEEcCCCcEEeecc--CCCceEEEEEeeCCCEEEEEe
Q 010037 429 NYVTSVAFNPVDDNYFISGSI------------DGKVRIWEVRRCQVVDYTD--IREIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 429 ~~V~~v~fsp~d~~~l~sgs~------------Dg~V~iwd~~~~~~~~~~~--~~~~V~~v~~spdg~~l~sgs 489 (519)
.....|.|.+ ++.+.+.... ...|..++..++++..+.. ....++.++|+||++.|.++-
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3467899999 7887773321 1257777777787765442 245789999999999888765
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=34.60 E-value=2.7e+02 Score=25.50 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=67.4
Q ss_pred CeEEEEeCCCcEEEEECCCC------eEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC---------cE-
Q 010037 400 GFLLSSSADKTVRLWQVGID------RCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC---------QV- 463 (519)
Q Consensus 400 ~~L~sgs~Dg~V~lWdl~~~------~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~---------~~- 463 (519)
..++..+.+|.|+-..+..- .....+...+.+..+.... ....++..+..|.+..+....- ..
T Consensus 81 ~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~ 159 (276)
T 3no0_A 81 NRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGARGVQG 159 (276)
T ss_dssp SEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEEC
T ss_pred CEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEE
Confidence 38899999999998876542 2222233456676666665 5667888889999888875331 11
Q ss_pred EeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCC
Q 010037 464 VDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 464 ~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~ 501 (519)
+.+ ...+.|.++...+++..++..+..|.++...+..
T Consensus 160 i~L-~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 160 IKL-EKNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CCC-CTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred Ecc-CCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 122 2345666666666677899999999999888754
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=33.42 E-value=97 Score=32.31 Aligned_cols=59 Identities=17% Similarity=0.249 Sum_probs=41.5
Q ss_pred cEEEEEEeeCCCCEEEEEeCC------------CeEEEEEcCCCcEEee--ccCCCceEEEEEeeCCCEEEEEe
Q 010037 430 YVTSVAFNPVDDNYFISGSID------------GKVRIWEVRRCQVVDY--TDIREIVSAVCYCPDGKGGIVGT 489 (519)
Q Consensus 430 ~V~~v~fsp~d~~~l~sgs~D------------g~V~iwd~~~~~~~~~--~~~~~~V~~v~~spdg~~l~sgs 489 (519)
..-.|+|+| .+++++.-..+ ..+.+.+..++++..+ ......++.++|+||++.|.+.-
T Consensus 477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 346789999 88877664322 2456667777776643 33457899999999999888753
No 365
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.57 E-value=1.7e+02 Score=30.34 Aligned_cols=59 Identities=19% Similarity=0.220 Sum_probs=40.7
Q ss_pred CCeeEEEEcCCCeEEEEeCC-------------CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEEe
Q 010037 389 SEVLDLSWSKNGFLLSSSAD-------------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISGS 448 (519)
Q Consensus 389 ~~V~~l~~sp~~~L~sgs~D-------------g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sgs 448 (519)
.....|.|.++|.|..++.. ..|..++..+++....+. ....++.++|+| |++.|.+.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP-D~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC-CCCEEEEEE
Confidence 45678999999944443321 256777777787666554 346789999999 888776654
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=27.96 E-value=3.7e+02 Score=25.02 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=67.0
Q ss_pred CeEEEEeCCCcEEEEECCC-------CeEEEEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCCC-------c---
Q 010037 400 GFLLSSSADKTVRLWQVGI-------DRCLRVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRRC-------Q--- 462 (519)
Q Consensus 400 ~~L~sgs~Dg~V~lWdl~~-------~~~~~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~~-------~--- 462 (519)
.+|+..+..|.++-..+.. +.....+...+.+..+.... .+..++..+.+|.+..+....- +
T Consensus 115 ~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~ 193 (312)
T 1suu_A 115 AYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVF-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVC 193 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEE
T ss_pred CEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeE
Confidence 3788889999998887642 22222233456666666654 5667888899999998887541 1
Q ss_pred EEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECCCC
Q 010037 463 VVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIKGM 502 (519)
Q Consensus 463 ~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~~~ 502 (519)
.+.+. ..+.|.++..-.++..|++.+..|..+...+..-
T Consensus 194 ~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 194 GMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp CCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred eEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 11222 2455666665556677889999999999888543
No 367
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=27.36 E-value=5.8e+02 Score=27.03 Aligned_cols=54 Identities=7% Similarity=0.003 Sum_probs=34.4
Q ss_pred CCCeEEEEEcCCCc----------EEeeccCCCceEEEEEeeCCCEEEEEecCCe--EEEEECCCCe
Q 010037 449 IDGKVRIWEVRRCQ----------VVDYTDIREIVSAVCYCPDGKGGIVGTMTGN--CRFYDIKGMQ 503 (519)
Q Consensus 449 ~Dg~V~iwd~~~~~----------~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~--v~iwdl~~~~ 503 (519)
..+.|.+.|+.+.. .+-.......+..+.|..+ .++++...+|. +.++++.+++
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 46778899987632 1112223446778888876 56677777775 6777776663
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=26.08 E-value=1.7e+02 Score=30.54 Aligned_cols=57 Identities=19% Similarity=0.233 Sum_probs=39.9
Q ss_pred CeeEEEEcCCCeEEEEeCC-------------CcEEEEECCCCeEEEEec--CCCcEEEEEEeeCCCCEEEEE
Q 010037 390 EVLDLSWSKNGFLLSSSAD-------------KTVRLWQVGIDRCLRVFS--HNNYVTSVAFNPVDDNYFISG 447 (519)
Q Consensus 390 ~V~~l~~sp~~~L~sgs~D-------------g~V~lWdl~~~~~~~~~~--h~~~V~~v~fsp~d~~~l~sg 447 (519)
..-.|+|+|.|.|+.+... ..+.+.+..+++..+.+. ....++.++|+| +++.|.+.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEEE
Confidence 4467899999955555432 235666777777665554 567899999999 77777664
No 369
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.89 E-value=3e+02 Score=27.77 Aligned_cols=65 Identities=11% Similarity=0.180 Sum_probs=42.5
Q ss_pred CeeEEEEcC----CC---eEEEEeCCCcEEEEECC-CCe-------EEEEe---cCCCcEEEEEEeeCCCCEEEEEeCCC
Q 010037 390 EVLDLSWSK----NG---FLLSSSADKTVRLWQVG-IDR-------CLRVF---SHNNYVTSVAFNPVDDNYFISGSIDG 451 (519)
Q Consensus 390 ~V~~l~~sp----~~---~L~sgs~Dg~V~lWdl~-~~~-------~~~~~---~h~~~V~~v~fsp~d~~~l~sgs~Dg 451 (519)
..+.|+... ++ .+..|+.+|.|+=.-+. .+. .+..+ ....+|..+.+++ +..+|+.++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-TTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-CCCEEEEEECCe
Confidence 456665543 24 78889999987543332 211 12222 3567899999999 889999999887
Q ss_pred eEEE
Q 010037 452 KVRI 455 (519)
Q Consensus 452 ~V~i 455 (519)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 370
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.83 E-value=1.3e+02 Score=30.66 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=36.5
Q ss_pred eEEeeecCCeEEEeeCC-ccccccccccccceee--cCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q 010037 249 ELTLGQRMRRVRVHPVK-KQSRELSSLYTGQEFL--AHEGSILTMKFSLDGQYLASGGEDGTVRV 310 (519)
Q Consensus 249 ~lasgs~dg~I~vw~~~-~~~~~~~~~~~~~~l~--~H~~~I~~l~fspdg~~LaSgs~Dg~I~i 310 (519)
.+..|+.+|+|+=.-+. .............++. ....+|..|.++++..+|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 45679999987443332 2110000111112222 23578999999999999999999887665
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=23.76 E-value=4.4e+02 Score=24.43 Aligned_cols=194 Identities=10% Similarity=0.039 Sum_probs=0.0
Q ss_pred cCCCEEEEEeCCCcEEEEeccc-------CeeeceeeccCCCCceEEEeecCCCCeEEeeccCCceeeeeeeccCCCeeE
Q 010037 294 LDGQYLASGGEDGTVRVWKVIE-------HERLDGFDVQDTDPSCLYFTINHLSQLIPIDVDKEKIDKTKSLRKSSDLTC 366 (519)
Q Consensus 294 pdg~~LaSgs~Dg~I~iWd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 366 (519)
|+..++++.+.+|.|+--.+.+ +.-+..+...........+.......++.+...+..+ .+
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~------------~~ 68 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVY------------SM 68 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEE------------EE
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEE------------EE
Q ss_pred EEeCCccccc--ccccee---EeeccCCCeeEEE---EcCCCeEEEEeCCCcEEEEECC-------CCeEEEEecCCCcE
Q 010037 367 VVLPPKVFRL--LEKPLH---EFQGHSSEVLDLS---WSKNGFLLSSSADKTVRLWQVG-------IDRCLRVFSHNNYV 431 (519)
Q Consensus 367 ~~~~~~~~~~--~~~~~~---~~~~h~~~V~~l~---~sp~~~L~sgs~Dg~V~lWdl~-------~~~~~~~~~h~~~V 431 (519)
..++...... .+.++. .+.....-+..+. +.++.+++..+..|.++--.+. .+.....+...+.+
T Consensus 69 ~~~elp~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~l 148 (307)
T 1zi0_A 69 KVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL 148 (307)
T ss_dssp EGGGSCCCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCE
T ss_pred EhhHCcCCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEE
Q ss_pred EEEEEeeCCCCEEEEEeCCCeEEEEEcCC---------CcEEeeccCCCceEEEEEeeCCCEEEEEecCCeEEEEECC
Q 010037 432 TSVAFNPVDDNYFISGSIDGKVRIWEVRR---------CQVVDYTDIREIVSAVCYCPDGKGGIVGTMTGNCRFYDIK 500 (519)
Q Consensus 432 ~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~---------~~~~~~~~~~~~V~~v~~spdg~~l~sgs~dg~v~iwdl~ 500 (519)
..+.... +...++..+.+|.+..+.... +...-.....+.|.++...+++..|++.+..|.++-.++.
T Consensus 149 v~~~~~~-~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 149 IGVDLTS-GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEEEEeC-CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
No 372
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.69 E-value=4.7e+02 Score=24.77 Aligned_cols=108 Identities=13% Similarity=-0.008 Sum_probs=53.9
Q ss_pred CeeEEEEcC---CCeEEEEeCCCcEEEEECCCCeEEEEec-------------------CCCcEEEEEEeeCCCCEEEEE
Q 010037 390 EVLDLSWSK---NGFLLSSSADKTVRLWQVGIDRCLRVFS-------------------HNNYVTSVAFNPVDDNYFISG 447 (519)
Q Consensus 390 ~V~~l~~sp---~~~L~sgs~Dg~V~lWdl~~~~~~~~~~-------------------h~~~V~~v~fsp~d~~~l~sg 447 (519)
.|.+|++.| .+.|+.++..+.|...+-.......... ....+.+|.++|.+...+..+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg 195 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIG 195 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEE
Confidence 477788875 3466666555555444322222111110 124688999998444545555
Q ss_pred eCCCeEEEEEcCCC--cEEee--cc---------CCCceEEEEEeeC-CCEEEEEecCCeEEEEE
Q 010037 448 SIDGKVRIWEVRRC--QVVDY--TD---------IREIVSAVCYCPD-GKGGIVGTMTGNCRFYD 498 (519)
Q Consensus 448 s~Dg~V~iwd~~~~--~~~~~--~~---------~~~~V~~v~~spd-g~~l~sgs~dg~v~iwd 498 (519)
..++.|...+-... +.+.. .. ....+.++++.|+ ...|++++..| |...+
T Consensus 196 ~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 196 MSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp EETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred ECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 44444443322111 11110 00 0134889999986 35666666544 54444
No 373
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=22.41 E-value=3.7e+02 Score=24.28 Aligned_cols=99 Identities=9% Similarity=0.047 Sum_probs=60.0
Q ss_pred eEEEEeCCCcEEEEE---CCC----CeEEE---EecCCCcEEEEEEeeCCCCEEEEEeCCCeEEEEEcCC-------CcE
Q 010037 401 FLLSSSADKTVRLWQ---VGI----DRCLR---VFSHNNYVTSVAFNPVDDNYFISGSIDGKVRIWEVRR-------CQV 463 (519)
Q Consensus 401 ~L~sgs~Dg~V~lWd---l~~----~~~~~---~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~iwd~~~-------~~~ 463 (519)
.|+..+..|.++-.. +.. +.++. .+.....|.++.... ++.+|+..+..|.++...+.. +..
T Consensus 46 ~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~-~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~ 124 (256)
T 1zvt_A 46 PVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMES-DDQKLLMASDAGYGFVCTFNDLVARNRAGKA 124 (256)
T ss_dssp CEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCC-TTCEEEEEBTTSEEEEEEGGGGCCCSTTCEE
T ss_pred EEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeC-CCCEEEEEeCCCeEEEeEHHHhcccCcCceE
Confidence 666667777755443 322 22211 123455677764433 567788899999999998743 222
Q ss_pred E-eeccCCCceEEEEEe-eCCCEEEEEecCCeEEEEECCC
Q 010037 464 V-DYTDIREIVSAVCYC-PDGKGGIVGTMTGNCRFYDIKG 501 (519)
Q Consensus 464 ~-~~~~~~~~V~~v~~s-pdg~~l~sgs~dg~v~iwdl~~ 501 (519)
. .+.. .+.+-.+... .++..|+..+.+|.+..+.+..
T Consensus 125 ~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 125 LITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp CBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 2 2322 3445445555 3456788999999998888754
No 374
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.31 E-value=6.2e+02 Score=26.63 Aligned_cols=54 Identities=17% Similarity=0.273 Sum_probs=37.2
Q ss_pred eEEEEeCCCcEE-EEECCCCe-------EE---EEecCCCcEEEEEEeeCCCCEEEEEeCCCeEEE
Q 010037 401 FLLSSSADKTVR-LWQVGIDR-------CL---RVFSHNNYVTSVAFNPVDDNYFISGSIDGKVRI 455 (519)
Q Consensus 401 ~L~sgs~Dg~V~-lWdl~~~~-------~~---~~~~h~~~V~~v~fsp~d~~~l~sgs~Dg~V~i 455 (519)
.+..|+.+|.|+ +.-..... .+ ..+....+|..+.+++ +..+|++++..+.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~-~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEET-TTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcC-CCCEEEEEECCEEEEE
Confidence 678899999875 33222211 12 2334677899999999 8899999998876665
Done!