Query 010041
Match_columns 519
No_of_seqs 561 out of 5518
Neff 10.2
Searched_HMMs 46136
Date Thu Mar 28 20:20:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010041.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010041hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.9E-47 4.2E-52 425.5 34.0 389 33-429 27-420 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.6E-47 3.5E-52 426.2 27.5 348 77-426 213-584 (968)
3 KOG4194 Membrane glycoprotein 100.0 1.4E-34 3.1E-39 277.2 7.5 351 78-430 80-433 (873)
4 KOG4194 Membrane glycoprotein 100.0 6.7E-35 1.5E-39 279.4 5.2 328 101-429 78-408 (873)
5 KOG0444 Cytoskeletal regulator 100.0 8.5E-34 1.8E-38 273.8 -3.3 386 77-472 33-423 (1255)
6 KOG0444 Cytoskeletal regulator 100.0 1.1E-32 2.3E-37 266.2 -6.4 371 78-459 9-383 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 1.6E-30 3.4E-35 239.1 -6.7 322 95-426 85-541 (565)
8 PLN03210 Resistant to P. syrin 99.9 4.1E-24 9E-29 239.0 26.4 335 76-424 532-904 (1153)
9 KOG0472 Leucine-rich repeat pr 99.9 1.3E-28 2.8E-33 226.7 -8.7 292 100-402 182-541 (565)
10 PLN03210 Resistant to P. syrin 99.9 7.1E-22 1.5E-26 221.1 24.9 285 102-400 590-904 (1153)
11 KOG0618 Serine/threonine phosp 99.9 2.5E-25 5.5E-30 224.8 -5.6 332 78-424 47-487 (1081)
12 KOG4237 Extracellular matrix p 99.9 1.7E-24 3.6E-29 199.4 -4.0 252 77-329 68-358 (498)
13 PRK15387 E3 ubiquitin-protein 99.9 6.1E-21 1.3E-25 198.9 18.2 264 102-409 202-465 (788)
14 KOG0618 Serine/threonine phosp 99.9 1.8E-23 3.8E-28 211.6 -2.0 290 125-423 219-510 (1081)
15 PRK15387 E3 ubiquitin-protein 99.9 1.4E-20 3.1E-25 196.1 17.4 263 125-431 201-463 (788)
16 PRK15370 E3 ubiquitin-protein 99.8 2.4E-19 5.3E-24 188.2 18.2 245 127-402 180-428 (754)
17 KOG4237 Extracellular matrix p 99.8 6.5E-21 1.4E-25 175.8 -1.4 306 106-426 51-359 (498)
18 cd00116 LRR_RI Leucine-rich re 99.8 2E-20 4.4E-25 182.4 0.5 106 105-210 2-121 (319)
19 cd00116 LRR_RI Leucine-rich re 99.8 2E-20 4.3E-25 182.5 0.2 277 129-425 2-319 (319)
20 PRK15370 E3 ubiquitin-protein 99.8 1.6E-18 3.4E-23 182.2 14.2 248 149-427 178-429 (754)
21 KOG0617 Ras suppressor protein 99.7 1.2E-18 2.5E-23 143.1 -4.5 154 100-258 32-186 (264)
22 KOG0617 Ras suppressor protein 99.7 1.7E-18 3.7E-23 142.1 -3.9 155 123-282 31-186 (264)
23 PLN03150 hypothetical protein; 99.5 9.5E-14 2.1E-18 145.7 13.7 152 32-210 369-528 (623)
24 PLN03150 hypothetical protein; 99.2 3.8E-11 8.2E-16 126.2 8.8 109 150-258 419-528 (623)
25 KOG0532 Leucine-rich repeat (L 99.2 6.5E-13 1.4E-17 128.9 -4.2 194 100-303 74-270 (722)
26 COG4886 Leucine-rich repeat (L 99.2 4.1E-11 8.8E-16 120.3 7.8 180 148-335 115-295 (394)
27 COG4886 Leucine-rich repeat (L 99.2 5.5E-11 1.2E-15 119.4 8.6 197 153-358 97-294 (394)
28 KOG1909 Ran GTPase-activating 99.2 4E-12 8.6E-17 116.7 0.1 247 169-426 26-311 (382)
29 KOG0532 Leucine-rich repeat (L 99.1 1.9E-12 4.2E-17 125.7 -3.8 177 95-280 92-271 (722)
30 KOG1909 Ran GTPase-activating 99.1 4.4E-12 9.4E-17 116.5 -1.6 199 193-402 88-311 (382)
31 KOG4658 Apoptotic ATPase [Sign 99.1 6.9E-11 1.5E-15 126.9 5.3 128 100-230 522-651 (889)
32 KOG4658 Apoptotic ATPase [Sign 99.1 7E-11 1.5E-15 126.9 5.0 108 100-208 544-653 (889)
33 KOG1187 Serine/threonine prote 99.1 2.9E-11 6.2E-16 118.1 1.5 94 424-519 244-346 (361)
34 KOG1259 Nischarin, modulator o 99.1 2.1E-11 4.6E-16 109.5 0.1 162 287-459 278-441 (490)
35 KOG3207 Beta-tubulin folding c 99.0 3.9E-11 8.5E-16 113.3 0.5 136 196-331 196-340 (505)
36 KOG3207 Beta-tubulin folding c 99.0 3.5E-11 7.5E-16 113.7 -0.6 209 146-379 118-340 (505)
37 PF14580 LRR_9: Leucine-rich r 99.0 4.7E-10 1E-14 96.7 5.7 107 123-234 17-126 (175)
38 KOG1259 Nischarin, modulator o 99.0 1.9E-10 4E-15 103.6 1.9 105 244-354 283-387 (490)
39 PF14580 LRR_9: Leucine-rich r 98.9 1.6E-09 3.5E-14 93.5 5.6 105 270-378 20-126 (175)
40 KOG0531 Protein phosphatase 1, 98.9 3.2E-10 7E-15 114.0 -0.5 224 145-381 91-321 (414)
41 PF13855 LRR_8: Leucine rich r 98.8 3.5E-09 7.6E-14 75.0 3.2 59 102-160 2-60 (61)
42 PF13855 LRR_8: Leucine rich r 98.8 4.3E-09 9.3E-14 74.5 3.4 60 125-184 1-60 (61)
43 KOG0531 Protein phosphatase 1, 98.8 9.8E-10 2.1E-14 110.5 -1.2 217 147-377 70-289 (414)
44 KOG0197 Tyrosine kinases [Sign 98.6 1.6E-08 3.5E-13 98.6 2.3 76 431-517 377-453 (468)
45 KOG0192 Tyrosine kinase specif 98.6 2E-08 4.3E-13 97.7 1.6 78 432-519 220-297 (362)
46 KOG1026 Nerve growth factor re 98.5 3.3E-08 7.2E-13 101.6 1.4 76 431-518 678-755 (774)
47 KOG2982 Uncharacterized conser 98.4 5.7E-08 1.2E-12 87.8 0.8 80 292-371 198-285 (418)
48 KOG2120 SCF ubiquitin ligase, 98.3 5.8E-09 1.3E-13 94.1 -7.7 177 222-400 186-374 (419)
49 KOG1859 Leucine-rich repeat pr 98.3 1.3E-08 2.8E-13 102.3 -6.4 124 127-257 166-291 (1096)
50 KOG2120 SCF ubiquitin ligase, 98.3 1.2E-08 2.5E-13 92.2 -6.5 180 174-378 186-376 (419)
51 PHA02988 hypothetical protein; 98.2 3.7E-07 8E-12 87.2 1.6 76 434-519 198-273 (283)
52 KOG4721 Serine/threonine prote 98.2 3.3E-07 7.2E-12 89.9 1.0 81 428-518 281-361 (904)
53 KOG2982 Uncharacterized conser 98.2 5.2E-07 1.1E-11 81.7 1.9 82 340-421 198-287 (418)
54 KOG1095 Protein tyrosine kinas 98.2 4.7E-07 1E-11 96.8 1.0 76 432-519 878-955 (1025)
55 PF07714 Pkinase_Tyr: Protein 98.1 1.9E-07 4.1E-12 88.0 -2.6 79 429-518 176-255 (259)
56 COG5238 RNA1 Ran GTPase-activa 98.1 6.9E-07 1.5E-11 79.9 0.5 86 99-185 28-132 (388)
57 smart00750 KIND kinase non-cat 98.1 1.4E-06 3E-11 76.7 2.0 81 432-518 78-162 (176)
58 KOG1859 Leucine-rich repeat pr 98.1 7.7E-08 1.7E-12 96.9 -6.8 126 102-234 165-292 (1096)
59 KOG0196 Tyrosine kinase, EPH ( 98.1 9.5E-07 2.1E-11 90.0 0.7 77 432-519 808-885 (996)
60 COG5238 RNA1 Ran GTPase-activa 98.1 3.7E-07 7.9E-12 81.6 -2.1 245 171-426 28-316 (388)
61 KOG0199 ACK and related non-re 98.0 2.5E-06 5.3E-11 86.0 2.8 77 431-518 288-365 (1039)
62 KOG4579 Leucine-rich repeat (L 98.0 3.6E-07 7.8E-12 73.2 -3.2 85 123-210 51-136 (177)
63 cd05048 PTKc_Ror Catalytic Dom 98.0 2E-06 4.3E-11 82.1 1.1 76 433-519 201-277 (283)
64 KOG1024 Receptor-like protein 98.0 1.8E-06 4E-11 81.1 0.9 73 434-519 474-549 (563)
65 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.0 2.3E-06 5E-11 81.7 1.5 82 434-518 186-274 (283)
66 KOG4278 Protein tyrosine kinas 98.0 2.8E-06 6E-11 84.4 1.6 74 434-518 442-516 (1157)
67 cd05116 PTKc_Syk Catalytic dom 97.9 2.2E-06 4.8E-11 80.5 0.6 75 434-519 174-249 (257)
68 cd05068 PTKc_Frk_like Catalyti 97.9 3.1E-06 6.8E-11 79.7 1.5 75 433-518 179-254 (261)
69 KOG0194 Protein tyrosine kinas 97.9 3.4E-06 7.3E-11 83.8 1.7 85 425-519 329-414 (474)
70 cd05114 PTKc_Tec_Rlk Catalytic 97.9 3.3E-06 7.1E-11 79.3 1.3 75 434-519 177-252 (256)
71 cd05102 PTKc_VEGFR3 Catalytic 97.9 3.7E-06 8E-11 82.6 1.2 77 433-519 251-328 (338)
72 cd05045 PTKc_RET Catalytic dom 97.9 2.9E-06 6.4E-11 81.3 0.3 75 434-519 205-280 (290)
73 KOG4579 Leucine-rich repeat (L 97.9 1.1E-06 2.4E-11 70.4 -2.2 115 98-215 50-164 (177)
74 cd08529 STKc_FA2-like Catalyti 97.9 4.5E-06 9.8E-11 78.3 1.4 75 434-519 177-251 (256)
75 cd05052 PTKc_Abl Catalytic dom 97.9 3.8E-06 8.3E-11 79.2 0.8 75 433-518 180-255 (263)
76 cd05063 PTKc_EphR_A2 Catalytic 97.9 4.2E-06 9.1E-11 79.1 1.1 74 434-518 186-260 (268)
77 cd05072 PTKc_Lyn Catalytic dom 97.8 5.7E-06 1.2E-10 77.9 1.5 74 434-518 180-254 (261)
78 cd05053 PTKc_FGFR Catalytic do 97.8 6E-06 1.3E-10 79.2 1.7 76 433-519 209-285 (293)
79 cd06642 STKc_STK25-YSK1 Cataly 97.8 5.4E-06 1.2E-10 78.9 1.2 75 434-519 177-251 (277)
80 cd05035 PTKc_Axl_like Catalyti 97.8 6E-06 1.3E-10 78.2 1.5 75 434-519 191-266 (273)
81 cd05036 PTKc_ALK_LTK Catalytic 97.8 5E-06 1.1E-10 79.1 0.9 76 432-518 195-271 (277)
82 cd05094 PTKc_TrkC Catalytic do 97.8 5.2E-06 1.1E-10 79.6 1.0 75 433-518 200-275 (291)
83 cd08528 STKc_Nek10 Catalytic d 97.8 4.5E-06 9.8E-11 79.0 0.5 76 434-519 189-264 (269)
84 cd05054 PTKc_VEGFR Catalytic d 97.8 6.2E-06 1.4E-10 80.9 1.2 78 432-519 249-327 (337)
85 KOG0200 Fibroblast/platelet-de 97.8 6.9E-06 1.5E-10 86.6 1.6 77 432-518 495-572 (609)
86 cd05064 PTKc_EphR_A10 Catalyti 97.8 5.9E-06 1.3E-10 78.1 0.8 75 433-518 183-258 (266)
87 cd05108 PTKc_EGFR Catalytic do 97.8 5.5E-06 1.2E-10 80.5 0.5 74 434-518 187-261 (316)
88 cd05091 PTKc_Ror2 Catalytic do 97.8 5.9E-06 1.3E-10 78.8 0.7 75 434-519 202-277 (283)
89 cd05085 PTKc_Fer Catalytic dom 97.8 6.6E-06 1.4E-10 76.9 0.9 76 433-519 169-245 (250)
90 cd05111 PTK_HER3 Pseudokinase 97.8 8E-06 1.7E-10 77.8 1.4 74 434-518 187-261 (279)
91 cd05059 PTKc_Tec_like Catalyti 97.8 7.1E-06 1.5E-10 77.0 1.1 74 434-518 177-251 (256)
92 PF12799 LRR_4: Leucine Rich r 97.8 2.5E-05 5.3E-10 50.6 3.2 10 148-157 23-32 (44)
93 cd05060 PTKc_Syk_like Catalyti 97.8 6.6E-06 1.4E-10 77.3 0.7 75 433-518 173-248 (257)
94 cd08218 STKc_Nek1 Catalytic do 97.8 8E-06 1.7E-10 76.6 1.1 76 433-519 176-251 (256)
95 cd06609 STKc_MST3_like Catalyt 97.8 9.9E-06 2.1E-10 76.9 1.7 75 434-519 174-249 (274)
96 PF12799 LRR_4: Leucine Rich r 97.8 2.8E-05 6.1E-10 50.3 3.3 36 150-186 2-37 (44)
97 cd05033 PTKc_EphR Catalytic do 97.8 1.1E-05 2.3E-10 76.3 1.8 74 434-518 184-258 (266)
98 cd05092 PTKc_TrkA Catalytic do 97.8 8.1E-06 1.8E-10 77.8 1.0 74 434-518 200-274 (280)
99 cd08223 STKc_Nek4 Catalytic do 97.8 1.1E-05 2.3E-10 75.8 1.8 76 433-519 177-252 (257)
100 cd05115 PTKc_Zap-70 Catalytic 97.8 8.3E-06 1.8E-10 76.6 1.0 74 434-518 174-248 (257)
101 cd05089 PTKc_Tie1 Catalytic do 97.7 9E-06 2E-10 78.2 1.0 75 434-519 194-269 (297)
102 cd05043 PTK_Ryk Pseudokinase d 97.7 8E-06 1.7E-10 77.8 0.6 75 434-519 195-270 (280)
103 cd06640 STKc_MST4 Catalytic do 97.7 1.3E-05 2.7E-10 76.3 1.9 75 434-519 177-251 (277)
104 cd05067 PTKc_Lck_Blk Catalytic 97.7 1.1E-05 2.5E-10 75.8 1.5 74 434-518 179-253 (260)
105 cd08217 STKc_Nek2 Catalytic do 97.7 1.1E-05 2.4E-10 76.0 1.3 75 434-519 186-260 (265)
106 cd05070 PTKc_Fyn_Yrk Catalytic 97.7 1E-05 2.2E-10 76.1 1.1 75 433-518 178-253 (260)
107 cd05044 PTKc_c-ros Catalytic d 97.7 1.3E-05 2.7E-10 75.9 1.7 75 433-518 188-263 (269)
108 cd05049 PTKc_Trk Catalytic dom 97.7 1.2E-05 2.5E-10 76.7 1.4 75 433-518 199-274 (280)
109 cd05113 PTKc_Btk_Bmx Catalytic 97.7 8.7E-06 1.9E-10 76.5 0.5 75 434-519 177-252 (256)
110 cd05038 PTKc_Jak_rpt2 Catalyti 97.7 1.2E-05 2.5E-10 76.7 1.4 83 434-519 188-277 (284)
111 cd05084 PTKc_Fes Catalytic dom 97.7 9.9E-06 2.1E-10 75.8 0.8 74 434-518 172-246 (252)
112 cd06619 PKc_MKK5 Catalytic dom 97.7 1.5E-05 3.2E-10 76.0 1.9 81 434-518 169-250 (279)
113 cd05104 PTKc_Kit Catalytic dom 97.7 1.1E-05 2.3E-10 80.5 0.9 76 434-519 292-368 (375)
114 cd05106 PTKc_CSF-1R Catalytic 97.7 1E-05 2.3E-10 80.5 0.7 76 434-519 290-366 (374)
115 cd05112 PTKc_Itk Catalytic dom 97.7 1.1E-05 2.4E-10 75.7 0.8 74 434-518 177-251 (256)
116 cd05148 PTKc_Srm_Brk Catalytic 97.7 1.6E-05 3.5E-10 74.8 1.9 74 434-518 180-254 (261)
117 cd08219 STKc_Nek3 Catalytic do 97.7 1.4E-05 3.1E-10 74.8 1.3 75 434-519 176-250 (255)
118 cd05075 PTKc_Axl Catalytic dom 97.7 1.4E-05 3E-10 75.8 1.2 74 434-518 190-264 (272)
119 cd05047 PTKc_Tie Catalytic dom 97.7 1.1E-05 2.4E-10 76.4 0.4 76 433-519 186-262 (270)
120 cd05093 PTKc_TrkB Catalytic do 97.7 1.2E-05 2.6E-10 76.9 0.7 75 433-518 197-272 (288)
121 cd05058 PTKc_Met_Ron Catalytic 97.7 1.5E-05 3.2E-10 75.1 1.0 75 433-518 177-252 (262)
122 cd05069 PTKc_Yes Catalytic dom 97.6 1.5E-05 3.3E-10 74.9 1.1 75 433-518 178-253 (260)
123 cd05065 PTKc_EphR_B Catalytic 97.6 1.7E-05 3.6E-10 75.1 1.3 75 433-518 186-261 (269)
124 cd05071 PTKc_Src Catalytic dom 97.6 2E-05 4.3E-10 74.3 1.7 75 433-518 178-253 (262)
125 cd08220 STKc_Nek8 Catalytic do 97.6 2.3E-05 5E-10 73.4 2.1 75 434-519 177-251 (256)
126 cd05090 PTKc_Ror1 Catalytic do 97.6 1.8E-05 3.9E-10 75.5 1.4 74 434-518 202-276 (283)
127 PRK15386 type III secretion pr 97.6 0.00018 3.9E-09 70.2 8.2 135 97-255 48-187 (426)
128 cd05109 PTKc_HER2 Catalytic do 97.6 1.6E-05 3.4E-10 75.8 0.9 74 434-518 187-261 (279)
129 cd06620 PKc_MAPKK_Byr1_like Ca 97.6 1.7E-05 3.6E-10 75.8 0.8 83 434-519 178-264 (284)
130 cd05055 PTKc_PDGFR Catalytic d 97.6 1.7E-05 3.7E-10 76.5 0.9 76 434-519 219-295 (302)
131 PRK15386 type III secretion pr 97.6 0.00024 5.3E-09 69.3 8.7 130 77-232 53-188 (426)
132 cd05083 PTKc_Chk Catalytic dom 97.6 1.6E-05 3.5E-10 74.5 0.6 75 434-519 173-248 (254)
133 cd06612 STKc_MST1_2 Catalytic 97.6 1.4E-05 3E-10 74.9 0.1 75 434-519 175-251 (256)
134 KOG0193 Serine/threonine prote 97.6 2.3E-05 5E-10 78.0 1.6 80 432-518 567-646 (678)
135 cd06624 STKc_ASK Catalytic dom 97.6 2.5E-05 5.4E-10 73.9 1.8 76 435-519 188-263 (268)
136 cd05105 PTKc_PDGFR_alpha Catal 97.6 1.6E-05 3.5E-10 79.7 0.5 76 434-519 315-391 (400)
137 PF13306 LRR_5: Leucine rich r 97.6 0.00025 5.4E-09 58.7 7.5 107 94-205 5-111 (129)
138 cd05032 PTKc_InsR_like Catalyt 97.6 2.5E-05 5.4E-10 74.2 1.5 75 433-518 196-271 (277)
139 cd05041 PTKc_Fes_like Catalyti 97.6 2.4E-05 5.2E-10 73.1 1.4 74 434-518 171-245 (251)
140 cd05098 PTKc_FGFR1 Catalytic d 97.6 1.7E-05 3.7E-10 76.7 0.3 75 434-519 218-293 (307)
141 cd05062 PTKc_IGF-1R Catalytic 97.6 1.8E-05 3.8E-10 75.3 0.4 74 434-519 197-272 (277)
142 cd05082 PTKc_Csk Catalytic dom 97.6 1.7E-05 3.7E-10 74.4 0.2 74 434-518 175-249 (256)
143 cd06641 STKc_MST3 Catalytic do 97.6 2.7E-05 5.8E-10 74.1 1.5 75 434-519 177-251 (277)
144 KOG1644 U2-associated snRNP A' 97.6 0.00014 3E-09 62.7 5.7 81 103-185 44-125 (233)
145 cd05073 PTKc_Hck Catalytic dom 97.6 3E-05 6.5E-10 72.9 1.9 74 434-518 179-253 (260)
146 cd06637 STKc_TNIK Catalytic do 97.6 2.6E-05 5.6E-10 73.9 1.4 76 434-519 192-267 (272)
147 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.6 2E-05 4.3E-10 75.2 0.5 82 435-519 188-277 (284)
148 cd05110 PTKc_HER4 Catalytic do 97.6 1.7E-05 3.8E-10 76.5 -0.0 76 433-519 186-262 (303)
149 cd08229 STKc_Nek7 Catalytic do 97.6 2.9E-05 6.3E-10 73.3 1.5 76 434-518 182-258 (267)
150 cd05088 PTKc_Tie2 Catalytic do 97.6 2.4E-05 5.3E-10 75.5 1.0 74 434-518 199-273 (303)
151 cd05050 PTKc_Musk Catalytic do 97.5 2E-05 4.3E-10 75.4 0.3 76 433-519 207-283 (288)
152 cd05040 PTKc_Ack_like Catalyti 97.5 2.2E-05 4.8E-10 73.6 0.6 76 433-519 175-252 (257)
153 KOG1644 U2-associated snRNP A' 97.5 0.00017 3.7E-09 62.2 5.8 103 126-230 43-149 (233)
154 cd05101 PTKc_FGFR2 Catalytic d 97.5 2.4E-05 5.2E-10 75.6 0.8 76 433-519 214-290 (304)
155 cd06613 STKc_MAP4K3_like Catal 97.5 4.3E-05 9.2E-10 71.9 2.5 76 434-519 180-258 (262)
156 cd06625 STKc_MEKK3_like Cataly 97.5 3.6E-05 7.8E-10 72.4 1.9 78 432-519 181-258 (263)
157 cd08228 STKc_Nek6 Catalytic do 97.5 3E-05 6.4E-10 73.2 1.2 77 434-519 182-259 (267)
158 cd06651 STKc_MEKK3 Catalytic d 97.5 2.5E-05 5.5E-10 73.8 0.7 75 434-519 185-259 (266)
159 KOG3665 ZYG-1-like serine/thre 97.5 3.1E-05 6.6E-10 81.9 1.3 82 148-231 147-230 (699)
160 cd06607 STKc_TAO Catalytic dom 97.5 4.1E-05 9E-10 74.0 2.1 75 434-519 190-265 (307)
161 cd05099 PTKc_FGFR4 Catalytic d 97.5 3.2E-05 6.9E-10 75.1 1.3 75 433-518 211-286 (314)
162 KOG2345 Serine/threonine prote 97.5 3.9E-05 8.4E-10 68.1 1.5 78 433-518 216-293 (302)
163 cd08225 STKc_Nek5 Catalytic do 97.5 2.7E-05 5.8E-10 73.0 0.5 75 434-519 178-252 (257)
164 cd05034 PTKc_Src_like Catalyti 97.5 3.2E-05 6.9E-10 72.7 0.8 74 434-518 180-254 (261)
165 cd06628 STKc_MAPKKK_Byr2_like 97.5 4.1E-05 8.9E-10 72.3 1.5 75 434-519 188-262 (267)
166 KOG0581 Mitogen-activated prot 97.5 6.2E-05 1.3E-09 70.7 2.5 79 432-518 251-332 (364)
167 cd05066 PTKc_EphR_A Catalytic 97.5 4E-05 8.6E-10 72.4 1.3 74 434-518 185-259 (267)
168 cd05107 PTKc_PDGFR_beta Cataly 97.5 2.7E-05 5.9E-10 78.1 0.1 76 434-519 317-393 (401)
169 cd08224 STKc_Nek6_Nek7 Catalyt 97.5 4.6E-05 9.9E-10 71.9 1.4 76 434-518 182-258 (267)
170 cd05039 PTKc_Csk_like Catalyti 97.4 4.1E-05 9E-10 71.8 1.0 74 434-518 175-249 (256)
171 cd05074 PTKc_Tyro3 Catalytic d 97.4 5.3E-05 1.2E-09 71.8 1.7 73 435-518 192-265 (273)
172 cd06626 STKc_MEKK4 Catalytic d 97.4 7.8E-05 1.7E-09 70.2 2.7 75 435-519 183-259 (264)
173 PTZ00283 serine/threonine prot 97.4 3.3E-05 7.2E-10 79.7 0.2 74 434-518 221-294 (496)
174 PLN00034 mitogen-activated pro 97.4 5.5E-05 1.2E-09 74.8 1.7 74 437-519 252-326 (353)
175 cd08530 STKc_CNK2-like Catalyt 97.4 7.5E-05 1.6E-09 69.9 2.6 75 434-519 177-251 (256)
176 cd06606 STKc_MAPKKK Catalytic 97.4 4.1E-05 8.9E-10 71.6 0.7 77 434-519 179-255 (260)
177 cd05100 PTKc_FGFR3 Catalytic d 97.4 4.2E-05 9.1E-10 75.0 0.7 75 434-519 212-287 (334)
178 cd06616 PKc_MKK4 Catalytic dom 97.4 3.1E-05 6.7E-10 74.1 -0.3 77 434-519 186-265 (288)
179 KOG0603 Ribosomal protein S6 k 97.4 7.5E-05 1.6E-09 75.0 2.4 78 427-518 482-560 (612)
180 PF13306 LRR_5: Leucine rich r 97.4 0.00046 1E-08 57.0 6.9 123 119-247 6-128 (129)
181 cd05056 PTKc_FAK Catalytic dom 97.4 6E-05 1.3E-09 71.3 1.7 74 434-518 184-258 (270)
182 cd05103 PTKc_VEGFR2 Catalytic 97.4 4.6E-05 1E-09 75.0 0.7 76 434-519 257-333 (343)
183 cd06635 STKc_TAO1 Catalytic do 97.4 7.1E-05 1.5E-09 72.8 1.9 75 434-518 200-274 (317)
184 cd06654 STKc_PAK1 Catalytic do 97.4 5.5E-05 1.2E-09 72.7 1.1 76 435-519 193-268 (296)
185 cd06608 STKc_myosinIII_like Ca 97.4 7.4E-05 1.6E-09 70.7 2.0 74 435-519 195-270 (275)
186 KOG4257 Focal adhesion tyrosin 97.4 5.2E-05 1.1E-09 75.7 1.0 78 430-518 564-642 (974)
187 cd05057 PTKc_EGFR_like Catalyt 97.4 6.1E-05 1.3E-09 71.7 1.4 74 434-518 187-261 (279)
188 cd08221 STKc_Nek9 Catalytic do 97.4 7.1E-05 1.5E-09 70.2 1.8 75 434-519 177-251 (256)
189 cd06639 STKc_myosinIIIB Cataly 97.4 8.3E-05 1.8E-09 71.2 2.3 73 435-518 210-284 (291)
190 cd06610 STKc_OSR1_SPAK Catalyt 97.4 0.0001 2.2E-09 69.5 2.7 76 434-519 183-262 (267)
191 cd05095 PTKc_DDR2 Catalytic do 97.4 9.4E-05 2E-09 71.1 2.5 78 434-518 208-290 (296)
192 cd06623 PKc_MAPKK_plant_like C 97.4 6.7E-05 1.5E-09 70.6 1.3 78 434-519 176-254 (264)
193 cd00192 PTKc Catalytic domain 97.4 6.5E-05 1.4E-09 70.5 1.2 74 434-518 183-257 (262)
194 cd06634 STKc_TAO2 Catalytic do 97.4 9.2E-05 2E-09 71.6 2.3 74 435-518 191-264 (308)
195 cd06917 STKc_NAK1_like Catalyt 97.4 8.8E-05 1.9E-09 70.4 2.1 74 435-519 179-253 (277)
196 cd06631 STKc_YSK4 Catalytic do 97.4 7.6E-05 1.7E-09 70.4 1.6 75 434-518 184-259 (265)
197 cd06621 PKc_MAPKK_Pek1_like Ca 97.4 6.7E-05 1.4E-09 71.8 1.2 80 434-519 179-264 (287)
198 cd06643 STKc_SLK Catalytic dom 97.3 7.3E-05 1.6E-09 71.3 1.5 75 435-519 185-260 (282)
199 cd05051 PTKc_DDR Catalytic dom 97.3 7.3E-05 1.6E-09 71.8 1.4 74 434-518 208-290 (296)
200 cd06636 STKc_MAP4K4_6 Catalyti 97.3 8.6E-05 1.9E-09 70.8 1.9 76 434-519 202-277 (282)
201 cd05097 PTKc_DDR_like Catalyti 97.3 6.6E-05 1.4E-09 72.1 1.0 79 434-519 207-290 (295)
202 KOG1025 Epidermal growth facto 97.3 0.00012 2.6E-09 75.5 2.8 74 432-518 874-950 (1177)
203 cd06646 STKc_MAP4K5 Catalytic 97.3 5.7E-05 1.2E-09 71.3 0.4 78 435-519 186-263 (267)
204 cd06632 STKc_MEKK1_plant Catal 97.3 9.1E-05 2E-09 69.4 1.5 75 435-519 179-253 (258)
205 cd05079 PTKc_Jak1_rpt2 Catalyt 97.3 0.00011 2.3E-09 70.2 1.9 82 434-518 188-276 (284)
206 cd07830 STKc_MAK_like Catalyti 97.3 0.0002 4.4E-09 68.1 3.8 86 434-519 175-278 (283)
207 cd06638 STKc_myosinIIIA Cataly 97.3 0.00011 2.3E-09 70.2 1.9 74 435-519 206-281 (286)
208 cd07862 STKc_CDK6 Catalytic do 97.3 0.0001 2.3E-09 70.5 1.8 26 434-459 185-210 (290)
209 cd06614 STKc_PAK Catalytic dom 97.3 9.1E-05 2E-09 70.8 1.3 76 434-519 192-268 (286)
210 cd08222 STKc_Nek11 Catalytic d 97.3 9.3E-05 2E-09 69.5 1.3 73 435-518 182-254 (260)
211 PTZ00267 NIMA-related protein 97.3 6.9E-05 1.5E-09 77.2 0.4 75 433-518 246-320 (478)
212 cd06649 PKc_MEK2 Catalytic dom 97.3 0.00011 2.3E-09 72.0 1.7 26 434-459 178-203 (331)
213 cd06629 STKc_MAPKKK_Bck1_like 97.3 0.0001 2.3E-09 69.7 1.6 75 435-519 189-267 (272)
214 cd06605 PKc_MAPKK Catalytic do 97.3 9.8E-05 2.1E-09 69.5 1.4 77 434-519 175-255 (265)
215 cd06622 PKc_MAPKK_PBS2_like Ca 97.3 0.00012 2.6E-09 69.9 2.0 76 435-518 184-259 (286)
216 KOG0198 MEKK and related serin 97.3 0.00013 2.7E-09 69.3 2.0 73 437-518 201-273 (313)
217 cd05096 PTKc_DDR1 Catalytic do 97.3 7.2E-05 1.6E-09 72.2 0.3 79 434-519 216-299 (304)
218 cd06618 PKc_MKK7 Catalytic dom 97.3 8.5E-05 1.8E-09 71.4 0.8 76 435-519 195-271 (296)
219 cd05061 PTKc_InsR Catalytic do 97.3 7.1E-05 1.5E-09 71.6 0.1 74 434-518 197-271 (288)
220 cd06648 STKc_PAK_II Catalytic 97.2 0.00012 2.5E-09 70.0 1.6 75 434-519 191-267 (285)
221 smart00220 S_TKc Serine/Threon 97.2 0.0001 2.2E-09 68.1 1.1 77 433-519 161-239 (244)
222 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.2 0.0001 2.2E-09 70.0 1.1 73 434-519 197-270 (274)
223 cd05122 PKc_STE Catalytic doma 97.2 0.00011 2.3E-09 68.5 1.1 73 435-518 174-248 (253)
224 PF08263 LRRNT_2: Leucine rich 97.2 0.00044 9.5E-09 44.5 3.6 36 35-73 3-43 (43)
225 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.2 0.00011 2.5E-09 68.9 1.3 72 435-519 182-254 (258)
226 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.2 8.4E-05 1.8E-09 70.3 0.3 74 435-519 186-264 (269)
227 KOG0201 Serine/threonine prote 97.2 0.00012 2.6E-09 70.2 1.3 82 426-518 179-260 (467)
228 cd08226 PK_STRAD_beta Pseudoki 97.2 0.00017 3.8E-09 70.4 2.5 25 435-459 187-211 (328)
229 cd05631 STKc_GRK4 Catalytic do 97.2 0.0001 2.2E-09 70.4 0.4 72 433-515 176-250 (285)
230 cd06658 STKc_PAK5 Catalytic do 97.2 0.00012 2.6E-09 70.2 0.9 75 434-519 194-270 (292)
231 cd05607 STKc_GRK7 Catalytic do 97.2 0.00014 3.1E-09 69.1 1.3 75 434-518 170-247 (277)
232 KOG2739 Leucine-rich acidic nu 97.2 0.00018 4E-09 64.6 1.8 84 100-186 42-129 (260)
233 cd06627 STKc_Cdc7_like Catalyt 97.2 0.00013 2.9E-09 68.0 1.0 74 435-519 176-249 (254)
234 KOG2739 Leucine-rich acidic nu 97.2 0.00021 4.6E-09 64.2 2.2 63 122-186 40-104 (260)
235 cd07838 STKc_CDK4_6_like Catal 97.2 0.00025 5.4E-09 67.6 2.8 85 434-519 182-282 (287)
236 cd06655 STKc_PAK2 Catalytic do 97.2 0.00011 2.4E-09 70.6 0.4 76 434-519 191-267 (296)
237 cd05118 STKc_CMGC Catalytic do 97.1 0.00017 3.7E-09 68.6 1.6 26 434-459 175-200 (283)
238 cd08215 STKc_Nek Catalytic dom 97.1 0.00021 4.5E-09 66.8 2.1 75 434-519 179-253 (258)
239 cd06617 PKc_MKK3_6 Catalytic d 97.1 0.00021 4.7E-09 68.0 2.3 74 435-518 184-258 (283)
240 smart00219 TyrKc Tyrosine kina 97.1 0.00016 3.5E-09 67.7 1.3 74 434-518 180-254 (258)
241 cd06656 STKc_PAK3 Catalytic do 97.1 0.00013 2.7E-09 70.3 0.5 77 434-519 191-267 (297)
242 cd07833 STKc_CDKL Catalytic do 97.1 0.00027 6E-09 67.4 2.8 26 434-459 178-203 (288)
243 PLN00181 protein SPA1-RELATED; 97.1 0.00015 3.1E-09 79.8 0.9 81 426-519 183-263 (793)
244 cd05632 STKc_GRK5 Catalytic do 97.1 0.00016 3.6E-09 69.0 1.0 74 434-518 177-253 (285)
245 KOG3665 ZYG-1-like serine/thre 97.1 0.00035 7.7E-09 74.0 3.5 151 100-252 121-282 (699)
246 cd06633 STKc_TAO3 Catalytic do 97.1 0.00021 4.6E-09 69.3 1.7 75 435-519 197-271 (313)
247 cd07859 STKc_TDY_MAPK_plant Ca 97.1 0.00035 7.5E-09 68.5 3.3 26 434-459 184-209 (338)
248 cd07846 STKc_CDKL2_3 Catalytic 97.1 0.00011 2.3E-09 70.2 -0.4 25 435-459 178-202 (286)
249 KOG0596 Dual specificity; seri 97.1 0.00013 2.8E-09 72.0 0.1 79 432-518 546-624 (677)
250 cd08227 PK_STRAD_alpha Pseudok 97.1 0.00022 4.9E-09 69.6 1.8 25 435-459 187-211 (327)
251 cd06645 STKc_MAP4K3 Catalytic 97.1 0.0002 4.3E-09 67.6 1.3 75 435-519 186-263 (267)
252 cd06644 STKc_STK10_LOK Catalyt 97.1 0.00027 5.9E-09 67.7 2.1 75 435-519 192-267 (292)
253 KOG0582 Ste20-like serine/thre 97.1 0.0004 8.7E-09 66.9 3.0 78 434-518 208-290 (516)
254 cd07840 STKc_CDK9_like Catalyt 97.0 0.0002 4.3E-09 68.3 1.0 85 435-519 179-282 (287)
255 cd05077 PTK_Jak1_rpt1 Pseudoki 97.0 0.00034 7.3E-09 65.9 2.5 72 434-518 185-257 (262)
256 cd06647 STKc_PAK_I Catalytic d 97.0 0.00028 6E-09 67.7 1.8 75 435-519 192-267 (293)
257 cd06615 PKc_MEK Catalytic doma 97.0 0.00021 4.5E-09 69.1 0.9 26 434-459 174-199 (308)
258 PHA02882 putative serine/threo 97.0 0.00013 2.8E-09 70.1 -0.6 81 433-518 208-289 (294)
259 cd08216 PK_STRAD Pseudokinase 97.0 0.00047 1E-08 66.8 3.2 26 435-460 187-212 (314)
260 cd06611 STKc_SLK_like Catalyti 97.0 0.00032 6.9E-09 66.7 2.0 74 435-519 185-260 (280)
261 cd07831 STKc_MOK Catalytic dom 97.0 0.00029 6.3E-09 67.0 1.6 25 435-459 176-200 (282)
262 cd05618 STKc_aPKC_iota Catalyt 97.0 0.00031 6.7E-09 68.7 1.6 73 434-514 172-249 (329)
263 cd06650 PKc_MEK1 Catalytic dom 97.0 0.00031 6.6E-09 68.8 1.5 26 434-459 178-203 (333)
264 cd05572 STKc_cGK_PKG Catalytic 96.9 0.00038 8.3E-09 65.4 2.0 75 434-516 168-242 (262)
265 cd07876 STKc_JNK2 Catalytic do 96.9 0.00041 8.8E-09 68.8 2.1 27 433-459 197-223 (359)
266 cd05579 STKc_MAST_like Catalyt 96.9 0.00032 6.9E-09 65.9 1.3 73 435-517 178-250 (265)
267 cd05574 STKc_phototropin_like 96.9 0.00021 4.6E-09 69.3 0.1 71 434-514 208-278 (316)
268 cd06630 STKc_MEKK1 Catalytic d 96.9 0.00053 1.2E-08 64.6 2.7 78 435-519 185-262 (268)
269 cd06659 STKc_PAK6 Catalytic do 96.9 0.00029 6.3E-09 67.7 0.9 75 434-519 193-269 (297)
270 cd07848 STKc_CDKL5 Catalytic d 96.9 0.0004 8.7E-09 66.3 1.8 26 434-459 177-202 (287)
271 cd07835 STKc_CDK1_like Catalyt 96.9 0.0002 4.4E-09 68.2 -0.6 25 435-459 177-201 (283)
272 cd07847 STKc_CDKL1_4 Catalytic 96.8 0.00046 1E-08 65.8 1.7 25 435-459 178-202 (286)
273 cd07860 STKc_CDK2_3 Catalytic 96.8 0.00043 9.3E-09 66.0 1.4 25 435-459 178-202 (284)
274 cd07866 STKc_BUR1 Catalytic do 96.8 0.00032 6.9E-09 67.8 0.4 25 435-459 204-228 (311)
275 cd05046 PTK_CCK4 Pseudokinase 96.8 0.00042 9.2E-09 65.7 1.2 74 435-518 195-269 (275)
276 cd07864 STKc_CDK12 Catalytic d 96.8 0.00051 1.1E-08 66.1 1.7 25 435-459 195-219 (302)
277 cd06652 STKc_MEKK2 Catalytic d 96.8 0.00053 1.2E-08 64.6 1.6 75 434-519 185-259 (265)
278 cd07861 STKc_CDK1_euk Catalyti 96.8 0.00056 1.2E-08 65.2 1.7 25 435-459 179-203 (285)
279 cd07841 STKc_CDK7 Catalytic do 96.8 0.00063 1.4E-08 65.3 2.2 23 497-519 258-280 (298)
280 cd05608 STKc_GRK1 Catalytic do 96.8 0.00063 1.4E-08 64.8 2.1 74 434-517 173-248 (280)
281 cd05588 STKc_aPKC Catalytic do 96.8 0.0005 1.1E-08 67.2 1.4 77 434-515 172-250 (329)
282 cd05037 PTK_Jak_rpt1 Pseudokin 96.8 0.00067 1.5E-08 63.5 2.2 72 434-518 182-254 (259)
283 cd07849 STKc_ERK1_2_like Catal 96.8 0.00065 1.4E-08 66.6 2.2 25 435-459 187-211 (336)
284 cd05582 STKc_RSK_N N-terminal 96.8 0.00054 1.2E-08 66.6 1.6 72 434-517 174-245 (318)
285 cd05589 STKc_PKN Catalytic dom 96.8 0.00068 1.5E-08 66.1 2.1 72 434-517 177-248 (324)
286 KOG2123 Uncharacterized conser 96.8 5.2E-05 1.1E-09 68.4 -5.2 56 102-161 20-75 (388)
287 cd07853 STKc_NLK Catalytic dom 96.8 0.00082 1.8E-08 66.9 2.7 25 435-459 182-206 (372)
288 cd05086 PTKc_Aatyk2 Catalytic 96.7 0.00035 7.6E-09 66.0 -0.0 77 435-519 185-263 (268)
289 cd05605 STKc_GRK4_like Catalyt 96.7 0.00038 8.3E-09 66.5 0.2 74 434-515 177-250 (285)
290 cd05578 STKc_Yank1 Catalytic d 96.7 0.00054 1.2E-08 64.2 1.1 76 434-518 175-252 (258)
291 cd05583 STKc_MSK_N N-terminal 96.7 0.00056 1.2E-08 65.4 1.1 76 435-518 185-260 (288)
292 cd07843 STKc_CDC2L1 Catalytic 96.7 0.0006 1.3E-08 65.3 1.3 25 435-459 184-208 (293)
293 cd07852 STKc_MAPK15 Catalytic 96.7 0.00098 2.1E-08 65.4 2.8 25 435-459 190-214 (337)
294 cd05042 PTKc_Aatyk Catalytic d 96.7 0.00032 6.8E-09 66.3 -0.7 74 434-518 185-263 (269)
295 KOG4341 F-box protein containi 96.7 4.8E-05 1.1E-09 72.5 -6.0 85 316-400 345-437 (483)
296 cd07863 STKc_CDK4 Catalytic do 96.7 0.00075 1.6E-08 64.4 1.7 26 434-459 183-208 (288)
297 cd05592 STKc_nPKC_theta_delta 96.7 0.00069 1.5E-08 65.8 1.4 71 434-516 172-242 (316)
298 PF00069 Pkinase: Protein kina 96.7 0.00017 3.8E-09 67.6 -2.8 83 432-519 173-255 (260)
299 cd05611 STKc_Rim15_like Cataly 96.7 0.00062 1.3E-08 63.9 1.0 73 435-517 170-244 (260)
300 cd07874 STKc_JNK3 Catalytic do 96.7 0.0006 1.3E-08 67.4 0.9 26 434-459 194-219 (355)
301 cd05609 STKc_MAST Catalytic do 96.7 0.00076 1.6E-08 65.1 1.6 74 434-517 192-266 (305)
302 cd07829 STKc_CDK_like Catalyti 96.6 0.00097 2.1E-08 63.3 1.9 26 434-459 175-200 (282)
303 cd07832 STKc_CCRK Catalytic do 96.6 0.00084 1.8E-08 64.0 1.4 24 435-458 178-201 (286)
304 cd07839 STKc_CDK5 Catalytic do 96.6 0.00052 1.1E-08 65.4 -0.0 23 436-458 178-200 (284)
305 cd05610 STKc_MASTL Catalytic d 96.6 0.00038 8.3E-09 74.7 -1.1 77 433-519 555-632 (669)
306 cd05585 STKc_YPK1_like Catalyt 96.6 0.00069 1.5E-08 65.7 0.8 71 434-516 169-239 (312)
307 cd05619 STKc_nPKC_theta Cataly 96.6 0.00079 1.7E-08 65.4 1.0 71 434-516 172-242 (316)
308 KOG2123 Uncharacterized conser 96.6 8.8E-05 1.9E-09 67.0 -5.1 100 124-227 18-123 (388)
309 cd05573 STKc_ROCK_NDR_like Cat 96.5 0.00073 1.6E-08 66.6 0.6 74 434-518 206-282 (350)
310 cd06657 STKc_PAK4 Catalytic do 96.5 0.00094 2E-08 64.0 1.4 74 434-518 192-267 (292)
311 PTZ00284 protein kinase; Provi 96.5 0.00094 2E-08 68.7 1.4 28 432-459 319-346 (467)
312 cd07837 STKc_CdkB_plant Cataly 96.5 0.00097 2.1E-08 63.9 1.4 25 435-459 189-213 (295)
313 PTZ00266 NIMA-related protein 96.5 0.00094 2E-08 72.8 1.4 73 435-518 220-292 (1021)
314 cd05630 STKc_GRK6 Catalytic do 96.5 0.00062 1.3E-08 65.0 0.0 73 434-514 177-249 (285)
315 cd07851 STKc_p38 Catalytic dom 96.5 0.001 2.3E-08 65.4 1.6 26 434-459 192-217 (343)
316 cd07844 STKc_PCTAIRE_like Cata 96.5 0.0012 2.6E-08 63.2 1.9 25 435-459 181-205 (291)
317 cd07834 STKc_MAPK Catalytic do 96.5 0.0017 3.7E-08 63.4 3.1 26 434-459 183-208 (330)
318 cd05570 STKc_PKC Catalytic dom 96.5 0.00069 1.5E-08 65.9 0.2 70 434-515 172-241 (318)
319 cd05600 STKc_Sid2p_Dbf2p Catal 96.5 0.00087 1.9E-08 65.6 0.9 75 434-518 174-254 (333)
320 cd05614 STKc_MSK2_N N-terminal 96.5 0.0015 3.2E-08 63.9 2.6 73 435-515 184-256 (332)
321 cd05584 STKc_p70S6K Catalytic 96.5 0.0012 2.6E-08 64.4 1.8 68 434-513 176-243 (323)
322 cd05571 STKc_PKB Catalytic dom 96.5 0.001 2.2E-08 64.8 1.3 68 433-513 170-238 (323)
323 cd05617 STKc_aPKC_zeta Catalyt 96.5 0.00095 2.1E-08 65.2 1.1 77 434-516 172-249 (327)
324 cd07879 STKc_p38delta_MAPK13 C 96.5 0.0017 3.7E-08 63.8 2.8 25 435-459 192-216 (342)
325 cd07858 STKc_TEY_MAPK_plant Ca 96.5 0.0014 3.1E-08 64.2 2.1 25 435-459 186-210 (337)
326 cd07867 STKc_CDC2L6 Catalytic 96.5 0.0019 4.2E-08 62.6 3.0 25 435-459 193-217 (317)
327 cd07870 STKc_PFTAIRE2 Catalyti 96.4 0.0012 2.6E-08 63.1 1.4 25 435-459 181-205 (291)
328 cd05620 STKc_nPKC_delta Cataly 96.4 0.0012 2.5E-08 64.2 1.2 71 434-516 172-242 (316)
329 PLN00009 cyclin-dependent kina 96.4 0.00094 2E-08 64.0 0.6 25 435-459 181-205 (294)
330 cd07875 STKc_JNK1 Catalytic do 96.4 0.0014 3E-08 65.1 1.7 26 434-459 201-226 (364)
331 KOG1023 Natriuretic peptide re 96.4 0.001 2.2E-08 66.7 0.7 81 434-518 134-217 (484)
332 PTZ00024 cyclin-dependent prot 96.4 0.0012 2.5E-08 64.8 1.1 25 435-459 211-235 (335)
333 cd07845 STKc_CDK10 Catalytic d 96.4 0.0014 3E-08 63.4 1.6 25 435-459 186-210 (309)
334 cd05123 STKc_AGC Catalytic dom 96.4 0.0011 2.4E-08 61.7 0.8 69 435-515 170-238 (250)
335 cd05590 STKc_nPKC_eta Catalyti 96.4 0.0011 2.3E-08 64.6 0.7 69 434-515 172-241 (320)
336 cd07873 STKc_PCTAIRE1 Catalyti 96.4 0.0016 3.5E-08 62.7 1.9 25 435-459 182-206 (301)
337 cd07842 STKc_CDK8_like Catalyt 96.4 0.0015 3.2E-08 63.3 1.7 25 435-459 193-217 (316)
338 cd07865 STKc_CDK9 Catalytic do 96.4 0.0025 5.4E-08 61.5 3.1 25 435-459 201-225 (310)
339 cd05591 STKc_nPKC_epsilon Cata 96.3 0.0012 2.5E-08 64.3 0.7 69 434-514 172-240 (321)
340 cd05616 STKc_cPKC_beta Catalyt 96.3 0.0017 3.6E-08 63.3 1.7 70 434-515 177-246 (323)
341 cd07854 STKc_MAPK4_6 Catalytic 96.3 0.0026 5.6E-08 62.5 2.9 25 435-459 196-220 (342)
342 cd07868 STKc_CDK8 Catalytic do 96.3 0.0034 7.4E-08 60.9 3.7 25 435-459 193-217 (317)
343 cd07855 STKc_ERK5 Catalytic do 96.3 0.0012 2.6E-08 64.6 0.5 25 435-459 189-213 (334)
344 cd07850 STKc_JNK Catalytic dom 96.3 0.0016 3.4E-08 64.4 1.2 26 434-459 193-218 (353)
345 KOG1094 Discoidin domain recep 96.3 0.0012 2.7E-08 65.8 0.4 80 432-518 713-797 (807)
346 cd05576 STKc_RPK118_like Catal 96.3 0.0018 4E-08 59.8 1.5 69 434-518 158-226 (237)
347 cd05633 STKc_GRK3 Catalytic do 96.2 0.0018 3.8E-08 61.6 1.3 75 435-518 173-252 (279)
348 KOG1947 Leucine rich repeat pr 96.2 0.00063 1.4E-08 70.3 -2.0 172 123-304 186-373 (482)
349 cd05581 STKc_PDK1 Catalytic do 96.2 0.0015 3.2E-08 62.0 0.6 69 435-515 199-267 (280)
350 KOG0195 Integrin-linked kinase 96.2 0.0031 6.8E-08 56.9 2.6 73 437-519 368-440 (448)
351 cd05595 STKc_PKB_beta Catalyti 96.2 0.0014 3.1E-08 63.8 0.5 70 432-513 169-238 (323)
352 KOG1947 Leucine rich repeat pr 96.2 0.0004 8.6E-09 71.8 -3.7 235 147-401 186-439 (482)
353 cd05586 STKc_Sck1_like Catalyt 96.2 0.003 6.6E-08 61.7 2.7 71 435-516 174-244 (330)
354 cd05575 STKc_SGK Catalytic dom 96.2 0.0025 5.4E-08 62.1 2.1 71 434-516 172-242 (323)
355 cd07836 STKc_Pho85 Catalytic d 96.2 0.002 4.4E-08 61.2 1.4 25 435-459 178-202 (284)
356 KOG0575 Polo-like serine/threo 96.2 0.0019 4.1E-08 64.9 1.0 85 423-519 183-267 (592)
357 cd05587 STKc_cPKC Catalytic do 96.2 0.0023 5.1E-08 62.3 1.7 70 434-515 177-246 (324)
358 PHA03212 serine/threonine kina 96.1 0.0024 5.3E-08 63.9 1.7 25 434-458 259-283 (391)
359 PTZ00263 protein kinase A cata 96.1 0.0017 3.8E-08 63.4 0.5 69 434-514 191-259 (329)
360 KOG4341 F-box protein containi 96.1 0.00043 9.4E-09 66.2 -3.6 275 76-352 138-437 (483)
361 PTZ00036 glycogen synthase kin 96.1 0.0012 2.5E-08 67.4 -0.8 26 434-459 247-272 (440)
362 cd05577 STKc_GRK Catalytic dom 96.1 0.0029 6.3E-08 60.0 2.0 75 435-517 171-245 (277)
363 cd05593 STKc_PKB_gamma Catalyt 96.1 0.0023 5.1E-08 62.4 1.2 68 434-513 171-238 (328)
364 cd05612 STKc_PRKX_like Catalyt 96.1 0.0015 3.2E-08 62.6 -0.3 68 435-514 175-242 (291)
365 cd05604 STKc_SGK3 Catalytic do 96.0 0.0024 5.2E-08 62.3 1.2 72 434-517 172-243 (325)
366 KOG4279 Serine/threonine prote 96.0 0.0049 1.1E-07 63.0 3.3 73 437-518 757-829 (1226)
367 cd07869 STKc_PFTAIRE1 Catalyti 96.0 0.0032 6.9E-08 60.7 1.9 25 435-459 181-205 (303)
368 cd05601 STKc_CRIK Catalytic do 96.0 0.0025 5.4E-08 62.2 1.0 74 434-518 185-260 (330)
369 cd07872 STKc_PCTAIRE2 Catalyti 96.0 0.0033 7.2E-08 60.7 1.8 25 435-459 182-206 (309)
370 cd07871 STKc_PCTAIRE3 Catalyti 95.9 0.0034 7.4E-08 60.0 1.6 25 435-459 181-205 (288)
371 PHA03207 serine/threonine kina 95.9 0.0031 6.7E-08 63.3 1.3 26 434-459 263-288 (392)
372 cd05594 STKc_PKB_alpha Catalyt 95.9 0.0021 4.5E-08 62.7 0.0 72 434-518 172-249 (325)
373 KOG0591 NIMA (never in mitosis 95.9 0.0038 8.3E-08 56.8 1.6 80 425-515 195-275 (375)
374 cd05603 STKc_SGK2 Catalytic do 95.9 0.0044 9.6E-08 60.3 2.2 71 434-516 172-242 (321)
375 PHA03209 serine/threonine kina 95.9 0.002 4.2E-08 63.8 -0.3 26 433-458 231-256 (357)
376 cd07857 STKc_MPK1 Catalytic do 95.9 0.0058 1.2E-07 59.8 2.9 25 435-459 187-211 (332)
377 cd05606 STKc_beta_ARK Catalyti 95.8 0.0041 8.8E-08 59.1 1.8 75 435-518 173-252 (278)
378 cd07878 STKc_p38beta_MAPK11 Ca 95.8 0.0049 1.1E-07 60.5 2.4 26 434-459 192-217 (343)
379 PHA03390 pk1 serine/threonine- 95.8 0.0037 7.9E-08 59.0 1.2 76 434-518 182-259 (267)
380 cd07856 STKc_Sty1_Hog1 Catalyt 95.8 0.002 4.3E-08 62.9 -0.6 26 434-459 182-207 (328)
381 cd05615 STKc_cPKC_alpha Cataly 95.8 0.004 8.6E-08 60.7 1.4 71 434-516 177-247 (323)
382 PHA03211 serine/threonine kina 95.7 0.0052 1.1E-07 62.7 2.1 26 433-458 337-362 (461)
383 cd05602 STKc_SGK1 Catalytic do 95.7 0.0046 9.9E-08 60.3 1.6 72 434-517 172-243 (325)
384 PRK13184 pknD serine/threonine 95.6 0.0034 7.3E-08 68.2 0.1 73 433-515 206-279 (932)
385 KOG0589 Serine/threonine prote 95.6 0.007 1.5E-07 59.5 2.2 85 424-519 172-256 (426)
386 PTZ00426 cAMP-dependent protei 95.5 0.0043 9.4E-08 60.9 0.6 73 434-518 204-281 (340)
387 KOG0983 Mitogen-activated prot 95.5 0.01 2.2E-07 53.9 2.8 73 434-517 270-345 (391)
388 cd05596 STKc_ROCK Catalytic do 95.5 0.0066 1.4E-07 60.3 1.7 74 435-518 224-301 (370)
389 KOG1989 ARK protein kinase fam 95.4 0.0068 1.5E-07 63.5 1.7 72 433-518 233-304 (738)
390 cd06653 STKc_MEKK3_like_1 Cata 95.4 0.007 1.5E-07 56.9 1.7 74 434-518 185-258 (264)
391 KOG0584 Serine/threonine prote 95.2 0.005 1.1E-07 62.1 -0.1 75 433-518 218-293 (632)
392 cd05613 STKc_MSK1_N N-terminal 95.2 0.0089 1.9E-07 57.1 1.4 72 435-514 185-256 (290)
393 PF00560 LRR_1: Leucine Rich R 95.1 0.0085 1.8E-07 32.1 0.7 12 175-186 2-13 (22)
394 cd07877 STKc_p38alpha_MAPK14 C 95.1 0.011 2.5E-07 58.1 1.9 25 435-459 195-219 (345)
395 PF00560 LRR_1: Leucine Rich R 95.0 0.0088 1.9E-07 32.0 0.6 11 128-138 3-13 (22)
396 cd05580 STKc_PKA Catalytic dom 95.0 0.0092 2E-07 57.0 1.0 69 434-514 174-242 (290)
397 KOG4645 MAPKKK (MAP kinase kin 94.8 0.013 2.8E-07 64.3 1.6 71 437-517 1420-1490(1509)
398 cd05626 STKc_LATS2 Catalytic d 94.7 0.013 2.7E-07 58.6 1.2 26 434-459 224-249 (381)
399 KOG0578 p21-activated serine/t 94.7 0.019 4.2E-07 57.3 2.3 75 435-518 446-520 (550)
400 KOG0615 Serine/threonine prote 94.4 0.044 9.6E-07 52.8 3.9 72 437-518 360-434 (475)
401 cd07880 STKc_p38gamma_MAPK12 C 94.4 0.014 3.1E-07 57.3 0.7 25 435-459 193-217 (343)
402 PLN03225 Serine/threonine-prot 94.3 0.014 3.1E-07 61.2 0.6 85 434-518 355-447 (566)
403 cd05628 STKc_NDR1 Catalytic do 94.2 0.014 3.1E-07 57.8 0.3 26 434-459 212-237 (363)
404 KOG0671 LAMMER dual specificit 94.1 0.03 6.4E-07 53.4 2.2 31 426-456 277-307 (415)
405 KOG1006 Mitogen-activated prot 93.9 0.02 4.4E-07 51.9 0.7 76 435-518 246-324 (361)
406 KOG0583 Serine/threonine prote 93.7 0.042 9.1E-07 54.3 2.5 71 436-518 201-272 (370)
407 cd05598 STKc_LATS Catalytic do 93.7 0.017 3.6E-07 57.6 -0.4 26 434-459 220-245 (376)
408 KOG4308 LRR-containing protein 93.2 0.00098 2.1E-08 67.5 -10.0 185 199-403 89-304 (478)
409 PHA03210 serine/threonine kina 93.1 0.051 1.1E-06 56.4 2.1 24 434-457 344-367 (501)
410 cd05599 STKc_NDR_like Catalyti 93.0 0.031 6.6E-07 55.4 0.3 26 434-459 215-240 (364)
411 cd05625 STKc_LATS1 Catalytic d 93.0 0.032 6.9E-07 55.7 0.5 26 434-459 224-249 (382)
412 KOG4308 LRR-containing protein 92.9 0.00056 1.2E-08 69.3 -12.3 136 293-428 144-305 (478)
413 cd05622 STKc_ROCK1 Catalytic d 92.9 0.049 1.1E-06 54.2 1.6 25 435-459 224-248 (371)
414 cd05621 STKc_ROCK2 Catalytic d 92.7 0.057 1.2E-06 53.7 1.7 25 435-459 224-248 (370)
415 cd05623 STKc_MRCK_alpha Cataly 92.6 0.062 1.3E-06 52.5 1.8 25 435-459 185-209 (332)
416 cd05627 STKc_NDR2 Catalytic do 92.6 0.05 1.1E-06 53.8 1.2 26 434-459 212-237 (360)
417 KOG1035 eIF-2alpha kinase GCN2 92.5 0.047 1E-06 59.8 0.8 72 434-518 794-868 (1351)
418 cd05597 STKc_DMPK_like Catalyt 92.0 0.086 1.9E-06 51.5 2.0 25 435-459 185-209 (331)
419 cd05624 STKc_MRCK_beta Catalyt 91.8 0.067 1.4E-06 52.2 0.9 25 435-459 185-209 (331)
420 cd05629 STKc_NDR_like_fungal C 91.6 0.057 1.2E-06 53.8 0.3 26 434-459 224-249 (377)
421 KOG0592 3-phosphoinositide-dep 91.5 0.077 1.7E-06 53.1 1.0 74 432-518 261-335 (604)
422 KOG0694 Serine/threonine prote 91.3 0.14 3.1E-06 52.7 2.7 76 427-516 537-614 (694)
423 KOG0610 Putative serine/threon 91.1 0.2 4.4E-06 48.5 3.3 81 424-514 301-381 (459)
424 cd00180 PKc Catalytic domain o 91.1 0.092 2E-06 46.7 1.1 23 497-519 190-212 (215)
425 KOG0588 Serine/threonine prote 89.6 0.18 3.9E-06 51.8 1.8 70 437-518 191-260 (786)
426 PF13504 LRR_7: Leucine rich r 89.3 0.25 5.4E-06 24.4 1.3 10 175-184 3-12 (17)
427 KOG0473 Leucine-rich repeat pr 88.3 0.013 2.7E-07 52.0 -6.5 86 97-185 38-123 (326)
428 KOG2052 Activin A type IB rece 87.9 0.2 4.4E-06 49.0 0.8 78 437-514 405-492 (513)
429 KOG0661 MAPK related serine/th 87.3 0.17 3.6E-06 49.9 -0.2 22 497-518 267-288 (538)
430 KOG0696 Serine/threonine prote 87.2 0.54 1.2E-05 45.6 3.1 37 423-459 515-551 (683)
431 KOG0605 NDR and related serine 87.0 0.24 5.1E-06 49.6 0.7 35 425-459 355-389 (550)
432 KOG0473 Leucine-rich repeat pr 86.8 0.012 2.5E-07 52.2 -7.5 84 122-208 39-122 (326)
433 KOG0579 Ste20-like serine/thre 86.3 0.54 1.2E-05 48.2 2.7 72 435-518 212-286 (1187)
434 KOG0580 Serine/threonine prote 85.8 0.29 6.2E-06 44.0 0.5 78 430-519 194-271 (281)
435 KOG4717 Serine/threonine prote 85.4 0.62 1.3E-05 46.6 2.6 71 437-519 198-268 (864)
436 KOG0577 Serine/threonine prote 84.9 0.61 1.3E-05 47.5 2.3 76 432-517 199-274 (948)
437 KOG0667 Dual-specificity tyros 84.6 0.48 1E-05 48.6 1.5 28 428-455 358-385 (586)
438 smart00369 LRR_TYP Leucine-ric 84.5 0.8 1.7E-05 25.4 1.8 13 126-138 3-15 (26)
439 smart00370 LRR Leucine-rich re 84.5 0.8 1.7E-05 25.4 1.8 13 126-138 3-15 (26)
440 KOG0593 Predicted protein kina 84.3 0.53 1.1E-05 43.9 1.5 22 497-518 260-281 (396)
441 KOG0598 Ribosomal protein S6 k 84.0 0.41 8.9E-06 45.6 0.7 27 433-459 200-226 (357)
442 PF13516 LRR_6: Leucine Rich r 83.9 0.32 6.9E-06 26.5 -0.1 18 101-118 2-19 (24)
443 KOG0574 STE20-like serine/thre 83.1 0.26 5.7E-06 45.5 -0.9 75 432-517 203-279 (502)
444 KOG3864 Uncharacterized conser 83.0 0.26 5.6E-06 43.1 -1.0 79 174-252 102-183 (221)
445 KOG3864 Uncharacterized conser 82.8 0.14 3.1E-06 44.6 -2.6 34 389-422 151-185 (221)
446 smart00370 LRR Leucine-rich re 82.7 1.3 2.9E-05 24.4 2.2 23 100-122 1-23 (26)
447 smart00369 LRR_TYP Leucine-ric 82.7 1.3 2.9E-05 24.4 2.2 23 100-122 1-23 (26)
448 KOG0587 Traf2- and Nck-interac 80.7 1.6 3.5E-05 46.6 3.6 73 434-518 204-279 (953)
449 KOG1027 Serine/threonine prote 78.8 1.2 2.6E-05 47.3 2.0 74 434-519 690-765 (903)
450 KOG0660 Mitogen-activated prot 77.1 3.2 6.9E-05 39.7 4.0 25 433-457 203-227 (359)
451 KOG0984 Mitogen-activated prot 77.0 0.99 2.1E-05 39.8 0.6 27 434-460 228-254 (282)
452 KOG0032 Ca2+/calmodulin-depend 76.3 1.8 3.9E-05 43.0 2.3 82 427-518 207-290 (382)
453 PLN03224 probable serine/threo 74.5 1.7 3.7E-05 44.8 1.7 23 437-459 411-434 (507)
454 KOG0585 Ca2+/calmodulin-depend 73.8 1.7 3.8E-05 43.1 1.5 73 436-519 297-370 (576)
455 KOG0695 Serine/threonine prote 73.8 1.7 3.8E-05 41.0 1.4 86 423-513 416-502 (593)
456 KOG0604 MAP kinase-activated p 72.5 2.4 5.1E-05 39.7 1.9 84 431-518 236-319 (400)
457 KOG3653 Transforming growth fa 69.4 1.9 4E-05 42.9 0.6 81 435-516 401-494 (534)
458 KOG0595 Serine/threonine-prote 68.9 1.2 2.5E-05 43.3 -0.9 36 424-459 180-215 (429)
459 KOG0614 cGMP-dependent protein 65.0 2.7 5.8E-05 42.3 0.7 24 436-459 597-620 (732)
460 KOG0033 Ca2+/calmodulin-depend 64.9 3.2 6.8E-05 37.7 1.1 77 431-518 185-264 (355)
461 KOG1290 Serine/threonine prote 64.1 6.4 0.00014 39.5 3.1 25 433-457 426-450 (590)
462 KOG0658 Glycogen synthase kina 63.6 6.4 0.00014 37.8 2.9 26 432-457 200-225 (364)
463 KOG0611 Predicted serine/threo 62.9 3.4 7.4E-05 40.2 1.0 70 437-519 232-301 (668)
464 smart00365 LRR_SD22 Leucine-ri 61.1 7.8 0.00017 21.6 1.8 12 174-185 3-14 (26)
465 KOG1345 Serine/threonine kinas 61.0 7.8 0.00017 35.9 2.8 27 433-459 200-226 (378)
466 KOG1266 Protein kinase [Signal 61.0 5.5 0.00012 37.9 1.9 24 434-457 258-281 (458)
467 KOG0600 Cdc2-related protein k 61.0 7.6 0.00016 39.1 3.0 25 434-458 296-320 (560)
468 KOG1033 eIF-2alpha kinase PEK/ 60.7 1.6 3.5E-05 43.8 -1.6 72 432-517 436-508 (516)
469 KOG0597 Serine-threonine prote 57.7 4.1 9E-05 41.6 0.6 32 428-459 170-201 (808)
470 smart00368 LRR_RI Leucine rich 56.1 9.9 0.00021 21.5 1.8 12 150-161 3-14 (28)
471 KOG1151 Tousled-like protein k 55.8 3.7 8.1E-05 40.5 -0.1 28 433-460 659-686 (775)
472 smart00364 LRR_BAC Leucine-ric 54.0 9.3 0.0002 21.3 1.3 13 174-186 3-15 (26)
473 KOG4242 Predicted myosin-I-bin 53.5 84 0.0018 31.8 8.6 271 125-400 165-479 (553)
474 KOG0599 Phosphorylase kinase g 52.6 4.6 0.0001 37.3 0.0 73 435-518 205-280 (411)
475 smart00221 STYKc Protein kinas 50.6 5.3 0.00012 35.7 0.1 26 434-459 176-201 (225)
476 KOG4242 Predicted myosin-I-bin 49.6 69 0.0015 32.3 7.4 16 387-402 438-453 (553)
477 KOG0594 Protein kinase PCTAIRE 48.6 19 0.00042 34.4 3.4 22 434-455 197-218 (323)
478 KOG0586 Serine/threonine prote 47.4 14 0.0003 38.1 2.4 25 435-459 232-256 (596)
479 KOG0986 G protein-coupled rece 47.3 6.5 0.00014 39.1 0.1 72 431-513 359-433 (591)
480 KOG3763 mRNA export factor TAP 47.3 7.9 0.00017 39.5 0.7 63 315-379 216-284 (585)
481 KOG0608 Warts/lats-like serine 47.0 6.7 0.00014 40.8 0.1 38 422-459 835-872 (1034)
482 KOG4250 TANK binding protein k 46.8 5.7 0.00012 41.6 -0.4 29 432-460 198-226 (732)
483 KOG0690 Serine/threonine prote 46.5 12 0.00025 35.6 1.6 26 434-459 344-369 (516)
484 PF14531 Kinase-like: Kinase-l 44.0 14 0.0003 35.0 1.7 64 433-512 225-288 (288)
485 KOG0616 cAMP-dependent protein 43.7 6.9 0.00015 36.7 -0.3 35 425-459 208-242 (355)
486 KOG0670 U4/U6-associated splic 42.8 20 0.00043 36.6 2.6 30 429-458 606-635 (752)
487 KOG3763 mRNA export factor TAP 36.6 20 0.00043 36.7 1.6 64 122-187 215-284 (585)
488 smart00367 LRR_CC Leucine-rich 34.1 28 0.0006 19.1 1.3 11 173-183 2-12 (26)
489 KOG4158 BRPK/PTEN-induced prot 32.2 42 0.00091 33.1 2.9 71 436-516 435-505 (598)
490 KOG1240 Protein kinase contain 30.1 21 0.00045 40.0 0.6 73 435-518 215-288 (1431)
491 KOG0607 MAP kinase-interacting 28.6 54 0.0012 31.4 2.9 28 432-459 265-292 (463)
492 KOG0659 Cdk activating kinase 27.6 48 0.001 30.8 2.4 24 432-455 176-199 (318)
493 KOG0590 Checkpoint kinase and 26.7 29 0.00062 36.9 0.9 79 437-519 504-583 (601)
494 KOG2137 Protein kinase [Signal 26.2 54 0.0012 34.8 2.7 35 424-458 175-209 (700)
495 KOG0669 Cyclin T-dependent kin 25.3 83 0.0018 29.1 3.4 25 434-458 205-229 (376)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.9e-47 Score=425.52 Aligned_cols=389 Identities=41% Similarity=0.664 Sum_probs=288.7
Q ss_pred ChhhHHHHHHHHHhccC----CCCCCCCCCCCCCCCCCcceeeeCCCCCEEEEEcCCCceecccCCCCCCCCCCCcEEEC
Q 010041 33 ISIHVAASEIERQALLN----SGWWKDRIPQNTSDHCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDL 108 (519)
Q Consensus 33 ~~~~~~~~~~~~~~~~~----~~~w~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l 108 (519)
.+.+..++..+|+.+.+ ...|.. ..++|.|.||+|+..++|+.|++++......+ +..+..+++|+.|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~-----~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~-~~~~~~l~~L~~L~L 100 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNS-----SADVCLWQGITCNNSSRVVSIDLSGKNISGKI-SSAIFRLPYIQTINL 100 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCC-----CCCCCcCcceecCCCCcEEEEEecCCCccccC-ChHHhCCCCCCEEEC
Confidence 34678899999998853 345643 46899999999987789999999976544433 567889999999999
Q ss_pred CCCccccccchhhc-CCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcc
Q 010041 109 GSNNLSGSIPSQID-SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSG 187 (519)
Q Consensus 109 ~~n~~~~~~~~~l~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 187 (519)
++|.+++.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|++++|.+.+.+|..++++++|++|++++|.+.+
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 178 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG 178 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc
Confidence 99999988887654 888999999988888877765 356778888888887777777777777788888888877777
Q ss_pred cCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcCcccccC
Q 010041 188 TIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFR 267 (519)
Q Consensus 188 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~ 267 (519)
.+|..++++++|++|++++|.+.+.+|..++++++|++|++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+.+
T Consensus 179 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 258 (968)
T PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258 (968)
T ss_pred cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC
Confidence 77777777777888888777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEE
Q 010041 268 LTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLD 347 (519)
Q Consensus 268 ~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 347 (519)
+++|++|++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|+
T Consensus 259 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 338 (968)
T PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338 (968)
T ss_pred CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEE
Confidence 77777777777777777777777777777777777777766777677777777777777777766666666777777777
Q ss_pred CcCCcCcccCCCCCCCCCCCcEEEccCccCccccchhhhcccCCCEEEccCCccccccccccccCCCCCEEEccCCccee
Q 010041 348 LSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNG 427 (519)
Q Consensus 348 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 427 (519)
+++|.+.+.+|..++.+++|+.|++++|.+++.+|..+..+.+|+.|++++|.+.+.+|..+..+++|+.|++++|++++
T Consensus 339 L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~ 418 (968)
T PLN00113 339 LWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG 418 (968)
T ss_pred CcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee
Confidence 77777766666666666666667766666666666666655666666666666665556555555666666666665555
Q ss_pred ee
Q 010041 428 KL 429 (519)
Q Consensus 428 ~~ 429 (519)
.+
T Consensus 419 ~~ 420 (968)
T PLN00113 419 EL 420 (968)
T ss_pred EC
Confidence 44
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.6e-47 Score=426.16 Aligned_cols=348 Identities=41% Similarity=0.628 Sum_probs=232.3
Q ss_pred CEEEEEcCCCceecccCCCCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEc
Q 010041 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDL 156 (519)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 156 (519)
+++.++++.+.....+ +..++.+++|++|++++|.+++.+|..++++++|++|++++|.+.+.+|..+.++++|++|++
T Consensus 213 ~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 291 (968)
T PLN00113 213 SLKWIYLGYNNLSGEI-PYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDL 291 (968)
T ss_pred CccEEECcCCccCCcC-ChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEEC
Confidence 4666777654433211 445677778888888888777777777777777888877777777777777777777777777
Q ss_pred cCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCc
Q 010041 157 GSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGV 236 (519)
Q Consensus 157 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 236 (519)
++|.+.+.+|..+.++++|++|++++|.+++.+|..+.++++|+.|++++|.+.+.+|..++.+++|+.|++++|.+.+.
T Consensus 292 s~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~ 371 (968)
T PLN00113 292 SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGE 371 (968)
T ss_pred cCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEee
Confidence 77777777777777777777777777777777777777777777777777777766776666666677777766666655
Q ss_pred CChhhccCCCCceeecccccccCcCcccccCCCC------------------------cceeeccCccCcccCChhccCC
Q 010041 237 LPQEIENLKSLTALSMDANNLGGPIPSTLFRLTN------------------------IEYLSLGFNRFNGSIPREIVNL 292 (519)
Q Consensus 237 ~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~------------------------L~~L~l~~n~~~~~~~~~l~~~ 292 (519)
+|..+..+++|+.|++++|.+.+.+|..+..+++ |+.|++++|.+.+.++..+..+
T Consensus 372 ~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 451 (968)
T PLN00113 372 IPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451 (968)
T ss_pred CChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccC
Confidence 5555554444555555544444444444444444 4444444444444444444444
Q ss_pred CCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEc
Q 010041 293 KNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNL 372 (519)
Q Consensus 293 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 372 (519)
++|+.|++++|.+.+.+|..+ ..++|+.|++++|++.+..|..+..+++|+.|++++|++.+.+|..+..+++|++|++
T Consensus 452 ~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 530 (968)
T PLN00113 452 PSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDL 530 (968)
T ss_pred CCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEEC
Confidence 444444444444444444332 2345666666666666666666777777777777777777777777777777777777
Q ss_pred cCccCccccchhhhcccCCCEEEccCCccccccccccccCCCCCEEEccCCcce
Q 010041 373 SSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 426 (519)
Q Consensus 373 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 426 (519)
++|.+++.+|..+..+++|+.|++++|++++.+|..+.+++.|+.+++++|++.
T Consensus 531 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 584 (968)
T PLN00113 531 SHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH 584 (968)
T ss_pred CCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcce
Confidence 777777777777777777777777777777777777777777777777776654
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=277.16 Aligned_cols=351 Identities=26% Similarity=0.298 Sum_probs=261.4
Q ss_pred EEEEEcCCCceecccCCCCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEcc
Q 010041 78 ITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLG 157 (519)
Q Consensus 78 v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 157 (519)
+..|+++++... ++....|-++++|+.+.+..|.++ .+|...+...+|+.|+|.+|.|+..-..++..++.|+.|||+
T Consensus 80 t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 80 TQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred eeeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 344555543322 223334567777777777777776 556555555567777777777776666677777778888887
Q ss_pred CCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcC
Q 010041 158 SNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVL 237 (519)
Q Consensus 158 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 237 (519)
.|.++..--..|..-.++++|+|++|.|+..-...|.++.+|..|.|++|+++...+..|.++++|+.|+|..|.+.-.-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 77776433334555567788888888877666667777778888888888887555566777888888888887766443
Q ss_pred ChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCCCCCCCC
Q 010041 238 PQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLT 317 (519)
Q Consensus 238 p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~ 317 (519)
--.|.++++|+.|.+..|.+...-...|..+.++++|+|..|++...-..++.++..|+.|+++.|.+...-++.....+
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 34677778888888888887776667777888888888888888766667788888888888888888877777777888
Q ss_pred CCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCccccc---hhhhcccCCCEE
Q 010041 318 SLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIP---FAIGKLFNLASL 394 (519)
Q Consensus 318 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~~~~L~~L 394 (519)
+|+.|+|++|+++...+..+..+..|++|.|++|++...-...|..+++|+.|+|++|.++..+. ..+.++++|+.|
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL 397 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKL 397 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhe
Confidence 88888888888887777777788888888888888877666677788888888888888876553 456678888889
Q ss_pred EccCCccccccccccccCCCCCEEEccCCcceeeee
Q 010041 395 DLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLA 430 (519)
Q Consensus 395 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 430 (519)
.+.+|++......+|.++..|++||+.+|.+.....
T Consensus 398 ~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 398 RLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred eecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 999998887777788889999999999998876543
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=279.37 Aligned_cols=328 Identities=29% Similarity=0.286 Sum_probs=286.8
Q ss_pred CCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEc
Q 010041 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (519)
Q Consensus 101 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (519)
+.-+.|++++|.+...-+..|.++++|+.+++..|.++ .+|.......+|+.|+|.+|.++.....++..++.|++|||
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 35578999999999888888999999999999999888 78876666778999999999998777778899999999999
Q ss_pred cCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCc
Q 010041 181 DGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGP 260 (519)
Q Consensus 181 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~ 260 (519)
+.|.++..--..|..-.++++|+|++|.++..-...|.++.+|..|.|+.|.++...+..|+++++|+.|++..|++.-.
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee
Confidence 99999865556677778899999999999977777888999999999999999988888899999999999999988755
Q ss_pred CcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCC
Q 010041 261 IPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNF 340 (519)
Q Consensus 261 ~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~ 340 (519)
--.+|.++++|+.|.+..|.+...-...|..+.++++|+|..|++...-..++.++++|+.|++++|.+...-+..+.-+
T Consensus 237 e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 237 EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred hhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhc
Confidence 45678889999999999999887667788899999999999999987777888999999999999999988888888889
Q ss_pred CCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCccccchhhhcccCCCEEEccCCcccccccc---ccccCCCCCE
Q 010041 341 SALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPT---EIGNCSELRN 417 (519)
Q Consensus 341 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---~l~~l~~L~~ 417 (519)
++|+.|+|++|+++..-+..|..+..|++|+|++|++...-..+|..+.+|++|||++|.++..+.+ .|..+++|+.
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lrk 396 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRK 396 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhh
Confidence 9999999999999988888888999999999999999877777888899999999999999887654 4678999999
Q ss_pred EEccCCcceeee
Q 010041 418 LTLNHNSLNGKL 429 (519)
Q Consensus 418 L~l~~n~l~~~~ 429 (519)
|++.+|++...-
T Consensus 397 L~l~gNqlk~I~ 408 (873)
T KOG4194|consen 397 LRLTGNQLKSIP 408 (873)
T ss_pred eeecCceeeecc
Confidence 999999986443
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=8.5e-34 Score=273.77 Aligned_cols=386 Identities=28% Similarity=0.416 Sum_probs=307.5
Q ss_pred CEEEEEcCCCceecccCCCCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCc-cCCccccCCCCCCEEE
Q 010041 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTG-TIPKEIGSLRNLEVLD 155 (519)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~ 155 (519)
+++-|.|....... -+..++.+.+|++|.+++|++. .+...+..++.|+.+.+.+|++.. -+|..+..+..|..||
T Consensus 33 ~~~WLkLnrt~L~~--vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 33 QMTWLKLNRTKLEQ--VPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILD 109 (1255)
T ss_pred heeEEEechhhhhh--ChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeee
Confidence 56666665433221 1556788889999999999887 445678889999999999998853 4777788899999999
Q ss_pred ccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCC
Q 010041 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGG 235 (519)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 235 (519)
|++|++. ..|..+.+..++-.|+|++|+|..+....|.+++.|-.|+|++|++. .+|..+..+..|++|++++|.+..
T Consensus 110 LShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~h 187 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNH 187 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhH
Confidence 9999997 77888988999999999999997544455778999999999999997 677788999999999999998876
Q ss_pred cCChhhccCCCCceeeccccccc-CcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCCCCC
Q 010041 236 VLPQEIENLKSLTALSMDANNLG-GPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLG 314 (519)
Q Consensus 236 ~~p~~l~~~~~L~~L~l~~n~l~-~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~ 314 (519)
..-..+..+++|+.|.+++.+-+ ..+|.++..+.+|..++++.|.+. .+|..+.++++|+.|++++|+++. +....+
T Consensus 188 fQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~~ 265 (1255)
T KOG0444|consen 188 FQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTEG 265 (1255)
T ss_pred HHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee-eeccHH
Confidence 55555667788888899876543 568889999999999999999988 789999999999999999999984 334455
Q ss_pred CCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcc-cCCCCCCCCCCCcEEEccCccCccccchhhhcccCCCE
Q 010041 315 RLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICG-IIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLAS 393 (519)
Q Consensus 315 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 393 (519)
.-.+|++|+++.|+++ .+|.++..+++|+.|.+.+|+++- .+|..++++..|+++..++|.+. ..|.+++.|..|+.
T Consensus 266 ~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~k 343 (1255)
T KOG0444|consen 266 EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQK 343 (1255)
T ss_pred HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHH
Confidence 5679999999999998 789999999999999999998763 57899999999999999999887 78999999999999
Q ss_pred EEccCCccccccccccccCCCCCEEEccCCcceeeeecceeccccccccchhhhhc--ccccCCCCcccccccccCCCCC
Q 010041 394 LDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLAHTMVVTEKCDVYSFGVVAL--EILMGRHPGELLSSLSSSSGPK 471 (519)
Q Consensus 394 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~dv~sfg~~~l--e~l~g~~p~~~~~~~~~~~~~~ 471 (519)
|.|+.|++- .+|+.|+-++.|+.||+..|+=---.+.......+...|....-+- -.+.|..|.....+..++..++
T Consensus 344 L~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNIDFSLq~QlrlAG~~pasv~~s~~sg~~pk 422 (1255)
T KOG0444|consen 344 LKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNIDFSLQHQLRLAGQMPASVISSVHSGGAPK 422 (1255)
T ss_pred hccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeecceehhhHHhhccCCccccccccccCCCCC
Confidence 999999987 7899999999999999999863211111112223455554432221 2467888887666655544444
Q ss_pred c
Q 010041 472 I 472 (519)
Q Consensus 472 ~ 472 (519)
.
T Consensus 423 D 423 (1255)
T KOG0444|consen 423 D 423 (1255)
T ss_pred c
Confidence 3
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=1.1e-32 Score=266.23 Aligned_cols=371 Identities=28% Similarity=0.462 Sum_probs=298.7
Q ss_pred EEEEEcCCCceecccCCCCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEcc
Q 010041 78 ITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLG 157 (519)
Q Consensus 78 v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 157 (519)
|+.++++++...+.--+.+...++.++.|.|...++. .+|..++.|.+|+.|.+++|++. .+...++.++.|+.+.+.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 5666666544443222555667888999999888776 67889999999999999999887 455678889999999999
Q ss_pred CCCCC-ccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCc-ccCCcCccCeeeCCCCcCCC
Q 010041 158 SNNLN-GTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPK-EIGSLRNLKELDLSSNKLGG 235 (519)
Q Consensus 158 ~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~l~~n~l~~ 235 (519)
.|++. .-+|..+..+..|..|||++|++. ..|..+....++-.|+|++|++. .||. -+.+++.|-.||+++|.+..
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~ 164 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEM 164 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhh
Confidence 99884 357888889999999999999987 78888999999999999999998 5554 45788899999999999884
Q ss_pred cCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCc-ccCChhccCCCCCCEEeccCCcccccCCCCCC
Q 010041 236 VLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFN-GSIPREIVNLKNLTSLSLGGNKLTGHIPSTLG 314 (519)
Q Consensus 236 ~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~-~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~ 314 (519)
+|..+..+..|++|.+++|.+...--..+..+++|+.|++++.+-+ ..+|.++..+.+|..+|++.|.+. .+|+.+.
T Consensus 165 -LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly 242 (1255)
T KOG0444|consen 165 -LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLY 242 (1255)
T ss_pred -cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHh
Confidence 5567788999999999999876443344556788888888876533 468889999999999999999998 6889999
Q ss_pred CCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCc-cccchhhhcccCCCE
Q 010041 315 RLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLS-GQIPFAIGKLFNLAS 393 (519)
Q Consensus 315 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~ 393 (519)
.+++|+.|+|++|.++. +....+...+|++|+++.|+++ .+|+.++++++|+.|++.+|+++ +.+|.+++.+..|+.
T Consensus 243 ~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Lev 320 (1255)
T KOG0444|consen 243 KLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEV 320 (1255)
T ss_pred hhhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHH
Confidence 99999999999999984 4445566789999999999998 78999999999999999999987 458999999999999
Q ss_pred EEccCCccccccccccccCCCCCEEEccCCcceeeeecceeccccccccchhhhhcccccCCCCcc
Q 010041 394 LDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 394 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
++..+|.+. .+|+.+++|++|+.|.+++|++-. ++.........+|+.+... =+++.-..|.+
T Consensus 321 f~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiT-LPeaIHlL~~l~vLDlreN-pnLVMPPKP~d 383 (1255)
T KOG0444|consen 321 FHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLIT-LPEAIHLLPDLKVLDLREN-PNLVMPPKPND 383 (1255)
T ss_pred HHhhccccc-cCchhhhhhHHHHHhcccccceee-chhhhhhcCCcceeeccCC-cCccCCCCcch
Confidence 999999876 889999999999999999999863 3333444455555543211 13455555554
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.95 E-value=1.6e-30 Score=239.14 Aligned_cols=322 Identities=34% Similarity=0.532 Sum_probs=182.1
Q ss_pred CCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCC
Q 010041 95 LNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRN 174 (519)
Q Consensus 95 ~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 174 (519)
++++.+..++.++.++|+++ .+|..+..+..|+.++.++|.+. .+|++++.+..|..++..+|+++ ..|..++++.+
T Consensus 85 ~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~ 161 (565)
T KOG0472|consen 85 AAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSK 161 (565)
T ss_pred HHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHH
Confidence 33444444455555555444 34444444444555555444444 33444444444444444444443 33333444433
Q ss_pred CCEEEccCCcCc----------------------ccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCc
Q 010041 175 LETLSLDGNKLS----------------------GTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNK 232 (519)
Q Consensus 175 L~~L~L~~n~l~----------------------~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 232 (519)
|..+++.+|++. +.+|+.++.+.+|..|++.+|++. ..| .|.+|..|++++++.|.
T Consensus 162 l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~ 239 (565)
T KOG0472|consen 162 LSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQ 239 (565)
T ss_pred HHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccH
Confidence 333444333333 234444445555555555555544 333 44455555555555554
Q ss_pred CCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCccccc----
Q 010041 233 LGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGH---- 308 (519)
Q Consensus 233 l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~---- 308 (519)
+.....+....++++..||+..|.+. ..|..+.-+.+|++||+++|.++ .+|..++++ +|+.|.+.||.+...
T Consensus 240 i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~i 316 (565)
T KOG0472|consen 240 IEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREI 316 (565)
T ss_pred HHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHH
Confidence 44222223335666666666666654 45666666666666666666666 355666666 666666666654100
Q ss_pred ---------------------------------CCC-CCC---CCCC--------------------------CcEEeCc
Q 010041 309 ---------------------------------IPS-TLG---RLTS--------------------------LQILDLS 325 (519)
Q Consensus 309 ---------------------------------~~~-~l~---~l~~--------------------------L~~L~l~ 325 (519)
.+. .+. .+.+ .+.++++
T Consensus 317 i~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~Vnfs 396 (565)
T KOG0472|consen 317 ISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFS 396 (565)
T ss_pred HcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecc
Confidence 000 000 0001 2234444
Q ss_pred CCccc-----------------------cCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCcc---
Q 010041 326 SNQLH-----------------------SSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSG--- 379 (519)
Q Consensus 326 ~n~l~-----------------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--- 379 (519)
.|++. +.+|..+..+++|..|++++|-+. .+|.+++.+..|+.++++.|++..
T Consensus 397 kNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~ 475 (565)
T KOG0472|consen 397 KNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPE 475 (565)
T ss_pred cchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchH
Confidence 44432 123445566788888899888776 578888888889999998876531
Q ss_pred --------------------ccchhhhcccCCCEEEccCCccccccccccccCCCCCEEEccCCcce
Q 010041 380 --------------------QIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 426 (519)
Q Consensus 380 --------------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 426 (519)
..+..+.++.+|..||+.+|.+. .+|+.++++++|++|++++|++.
T Consensus 476 ~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 476 CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 12345788899999999999987 78999999999999999999987
No 8
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=4.1e-24 Score=238.98 Aligned_cols=335 Identities=25% Similarity=0.334 Sum_probs=234.9
Q ss_pred CCEEEEEcCCCc-eecccCCCCCCCCCCCcEEECCCCc------cccccchhhcCCC-CCCEEEcccCcCCccCCccccC
Q 010041 76 GRITDIGLQKSN-IKGELGRLNFSCFPNLQYLDLGSNN------LSGSIPSQIDSLS-NLTYIYLYENNLTGTIPKEIGS 147 (519)
Q Consensus 76 ~~v~~l~l~~~~-~~~~~~~~~~~~l~~L~~L~l~~n~------~~~~~~~~l~~l~-~L~~L~L~~n~~~~~~p~~~~~ 147 (519)
..|..+.+.-.. ....+...+|..+++|+.|.+..+. +...+|..+..++ +|+.|.+.++.+. .+|..| .
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~ 609 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-R 609 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-C
Confidence 356666554211 1223445678889999999886653 2334566666654 5888888887765 667666 4
Q ss_pred CCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeee
Q 010041 148 LRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELD 227 (519)
Q Consensus 148 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 227 (519)
..+|+.|++++|.+. .++..+..+++|+.|+|+++...+.+| .++.+++|++|++++|.....+|..++++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 678888888888776 566677778888888888776555666 477788888888888776667788888888888888
Q ss_pred CCCCcCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhc------------------
Q 010041 228 LSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREI------------------ 289 (519)
Q Consensus 228 l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l------------------ 289 (519)
+++|.....+|..+ ++++|+.|++++|...+.+|.. ..+|+.|++++|.+. .+|..+
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKL 762 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhc
Confidence 88876555666544 6777888888777655555432 345666667666654 233221
Q ss_pred ------------cCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccC
Q 010041 290 ------------VNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGII 357 (519)
Q Consensus 290 ------------~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 357 (519)
..+++|+.|++++|...+.+|..++.+++|+.|++++|...+.+|... .+++|+.|++++|.....+
T Consensus 763 ~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~ 841 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTF 841 (1153)
T ss_pred cccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccc
Confidence 123567777777777666777778888888888888776555566554 5778888888887655455
Q ss_pred CCCCCCCCCCcEEEccCccCccccchhhhcccCCCEEEccCCccccccccccccCCCCCEEEccCCc
Q 010041 358 PDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNS 424 (519)
Q Consensus 358 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 424 (519)
|.. ..+|++|++++|.++ .+|..+..+++|++|++++|.-...+|..+..++.|+.+++++|.
T Consensus 842 p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 842 PDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 443 357888888888887 578888889999999998876555677778888888888888875
No 9
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.93 E-value=1.3e-28 Score=226.68 Aligned_cols=292 Identities=32% Similarity=0.502 Sum_probs=198.5
Q ss_pred CCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCcccc-CCCCCCEE
Q 010041 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIG-SVRNLETL 178 (519)
Q Consensus 100 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L 178 (519)
++.|++||...|-++ .+|+.++.+.+|..|+|..|++. .+| .|.+|..|++|+++.|.+. .+|.+.. +++++.+|
T Consensus 182 m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vL 257 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVL 257 (565)
T ss_pred HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceee
Confidence 555666666655554 45556666666666666666665 344 5666666666666666654 4454433 66666677
Q ss_pred EccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCC-----------------------
Q 010041 179 SLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGG----------------------- 235 (519)
Q Consensus 179 ~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~----------------------- 235 (519)
|+..|++. ..|..+..+.+|++||+++|.++ ..|.+++++ .|+.|.+.+|.+..
T Consensus 258 DLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~ 334 (565)
T KOG0472|consen 258 DLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 334 (565)
T ss_pred eccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 77777665 56666666666777777777666 345566666 66666666665420
Q ss_pred --------------c-CC---hhhccCCCCceeecccccccCcCcccccCCCC---cceeeccCccCc------------
Q 010041 236 --------------V-LP---QEIENLKSLTALSMDANNLGGPIPSTLFRLTN---IEYLSLGFNRFN------------ 282 (519)
Q Consensus 236 --------------~-~p---~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~---L~~L~l~~n~~~------------ 282 (519)
. .+ .......+.+.|++++-+++ .+|...+.... ....+++.|++.
T Consensus 335 dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkel 413 (565)
T KOG0472|consen 335 DGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKEL 413 (565)
T ss_pred CCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHH
Confidence 0 00 00112223344444443333 22222222111 444445444432
Q ss_pred -----------ccCChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCC
Q 010041 283 -----------GSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDN 351 (519)
Q Consensus 283 -----------~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n 351 (519)
+.+|..++.+++|..|++++|.+. .+|..++.+..|+.++++.|+|. ..|.++.....++.+-.++|
T Consensus 414 vT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~n 491 (565)
T KOG0472|consen 414 VTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNN 491 (565)
T ss_pred HHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccc
Confidence 356667788899999999999887 67888999999999999999987 78888888888888888889
Q ss_pred cCcccCCCCCCCCCCCcEEEccCccCccccchhhhcccCCCEEEccCCccc
Q 010041 352 RICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLS 402 (519)
Q Consensus 352 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 402 (519)
++....+..+..+.+|..|++.+|.+. .+|..++++.+|+.|++++|.|.
T Consensus 492 qi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 492 QIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 998777777999999999999999998 78999999999999999999998
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=7.1e-22 Score=221.11 Aligned_cols=285 Identities=26% Similarity=0.322 Sum_probs=185.6
Q ss_pred CCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEcc
Q 010041 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLD 181 (519)
Q Consensus 102 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 181 (519)
+|+.|++.++.+. .+|..+ ...+|+.|++.+|.+. .++..+..+++|++|+|+++...+.+| .+..+++|++|+++
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~ 665 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLS 665 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEec
Confidence 4666666655543 344444 3455666666665554 345555556666666665554334444 35555666666666
Q ss_pred CCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcC
Q 010041 182 GNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPI 261 (519)
Q Consensus 182 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~ 261 (519)
+|.....+|..++++++|+.|++++|.....+|..+ ++++|+.|++++|...+.+|.. ..+|+.|++++|.+.. +
T Consensus 666 ~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~-l 740 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEE-F 740 (1153)
T ss_pred CCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcccc-c
Confidence 655444555556666666666666554444455433 4555556665555433333321 2344555555544321 2
Q ss_pred cc------------------------------cccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCC
Q 010041 262 PS------------------------------TLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPS 311 (519)
Q Consensus 262 ~~------------------------------~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~ 311 (519)
|. .....++|+.|++++|...+.+|..+.++++|+.|++++|...+.+|.
T Consensus 741 P~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~ 820 (1153)
T PLN03210 741 PSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPT 820 (1153)
T ss_pred cccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCC
Confidence 21 111245788899998887778999999999999999999876557776
Q ss_pred CCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCccccchhhhcccCC
Q 010041 312 TLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNL 391 (519)
Q Consensus 312 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 391 (519)
.+ .+++|+.|++++|.....+|.. ..+|+.|++++|.++ .+|..+..+++|+.|++++|+-...+|..+..++.|
T Consensus 821 ~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L 895 (1153)
T PLN03210 821 GI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHL 895 (1153)
T ss_pred CC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCC
Confidence 65 7899999999998766555543 468999999999987 578888999999999999976555678888888899
Q ss_pred CEEEccCCc
Q 010041 392 ASLDLSKNK 400 (519)
Q Consensus 392 ~~L~l~~n~ 400 (519)
+.+++++|.
T Consensus 896 ~~L~l~~C~ 904 (1153)
T PLN03210 896 ETVDFSDCG 904 (1153)
T ss_pred CeeecCCCc
Confidence 999988884
No 11
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=2.5e-25 Score=224.81 Aligned_cols=332 Identities=32% Similarity=0.436 Sum_probs=181.4
Q ss_pred EEEEEcCCCceecccCCCCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEcc
Q 010041 78 ITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLG 157 (519)
Q Consensus 78 v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 157 (519)
+.+|+++++..... +..+..+.+|+.|.++.|.+. ..|.+..++++|++|+|.+|.+. ..|.++..+++|++|+++
T Consensus 47 L~~l~lsnn~~~~f--p~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 47 LKSLDLSNNQISSF--PIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eEEeeccccccccC--CchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 56777775443221 445667888888888888776 55678888888888888888766 788888888888888888
Q ss_pred CCCCCccCCccccCCCCCCEEEccC-------------------CcCcccCchhccCCCCCCEEeccCCcCCCCCCcccC
Q 010041 158 SNNLNGTIPIEIGSVRNLETLSLDG-------------------NKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIG 218 (519)
Q Consensus 158 ~n~l~~~~p~~l~~l~~L~~L~L~~-------------------n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~ 218 (519)
+|.+. .+|.-+..+..+..+..++ |.+.+.++..+..+.. .|+|.+|.+... .+.
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls 196 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLS 196 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhh
Confidence 88875 5565555444444444444 4444444444433333 356665554411 111
Q ss_pred CcC--------------------ccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccC
Q 010041 219 SLR--------------------NLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGF 278 (519)
Q Consensus 219 ~l~--------------------~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~ 278 (519)
.+. +|+.|+...|.+....+ -.-..+|++++++.|++++ +|+++..+.+|+.+...+
T Consensus 197 ~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~ 273 (1081)
T KOG0618|consen 197 NLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANH 273 (1081)
T ss_pred hccchhhhhhhhcccceEEecCcchheeeeccCcceeecc--ccccccceeeecchhhhhc-chHHHHhcccceEecccc
Confidence 222 22233333332221100 0111244555555555442 335555555555555555
Q ss_pred ccCcc----------------------cCChhccCCCCCCEEeccCCcccccCCCCC-C---------------------
Q 010041 279 NRFNG----------------------SIPREIVNLKNLTSLSLGGNKLTGHIPSTL-G--------------------- 314 (519)
Q Consensus 279 n~~~~----------------------~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l-~--------------------- 314 (519)
|.++. -+|......+.|++|++..|.+.. .|+.+ .
T Consensus 274 N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~ 352 (1081)
T KOG0618|consen 274 NRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPS 352 (1081)
T ss_pred hhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhcccccccc
Confidence 54431 244444555666666666665542 11111 0
Q ss_pred ----CCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCccccch-------
Q 010041 315 ----RLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPF------- 383 (519)
Q Consensus 315 ----~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------- 383 (519)
..+.|+.|.+.+|.+++..-..+.++++|+.|+|++|++.......+.++..|++|+|++|+++ .+|.
T Consensus 353 ~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~ 431 (1081)
T KOG0618|consen 353 YEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGR 431 (1081)
T ss_pred ccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhh
Confidence 0122344455555555544445566667777777777766444445566667777777777665 3444
Q ss_pred ---------------hhhcccCCCEEEccCCccccccccccccCCCCCEEEccCCc
Q 010041 384 ---------------AIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNS 424 (519)
Q Consensus 384 ---------------~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 424 (519)
.+..++.|+.+|++.|+++...-..-..-++|++||+++|.
T Consensus 432 L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 432 LHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hHHHhhcCCceeechhhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 34455566666666666654322221122566666666664
No 12
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=1.7e-24 Score=199.38 Aligned_cols=252 Identities=26% Similarity=0.319 Sum_probs=142.4
Q ss_pred CEEEEEcCCCceecccCCCCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEccc-CcCCccCCccccCCCCCCEEE
Q 010041 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYE-NNLTGTIPKEIGSLRNLEVLD 155 (519)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~-n~~~~~~p~~~~~l~~L~~L~ 155 (519)
..+.|.|..+.+. .+++.+|+.+++||.|||++|+|+..-|++|.+++.|..|-+.+ |+|+......|+++..|+.|.
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 3455555544433 24555666666666666666666666666666666666655555 566644445566666666666
Q ss_pred ccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCC------------CCCcccCCcCc-
Q 010041 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSG------------TIPKEIGSLRN- 222 (519)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~------------~~p~~l~~l~~- 222 (519)
+.-|++.-.....|..+++|..|.+..|.+...--..|..+..++.+.+..|.+-. ..|-.++...-
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 66666654445556666666666666666543222355556666666665554210 01111111100
Q ss_pred ---------------------cCee--eC-CCCcCCCcCC-hhhccCCCCceeecccccccCcCcccccCCCCcceeecc
Q 010041 223 ---------------------LKEL--DL-SSNKLGGVLP-QEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLG 277 (519)
Q Consensus 223 ---------------------L~~L--~l-~~n~l~~~~p-~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~ 277 (519)
++.+ .+ +.+...+..| ..|+.+++|++|++++|.++++-+.+|.+...+++|.|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 0000 00 0111111222 245666777777777777776666677777777777777
Q ss_pred CccCcccCChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCcc
Q 010041 278 FNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 329 (519)
Q Consensus 278 ~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 329 (519)
.|++...-...|.++..|+.|++.+|+++...|..|..+.+|.+|++-.|.+
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 7766654455566667777777777777766666677777777777766654
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=6.1e-21 Score=198.94 Aligned_cols=264 Identities=28% Similarity=0.386 Sum_probs=156.9
Q ss_pred CCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEcc
Q 010041 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLD 181 (519)
Q Consensus 102 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 181 (519)
.-..|+++.++++ .+|..+. ++|+.|++.+|+++. +|. .+++|++|++++|+++ .+|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 3556777777776 4555554 367777777777763 443 2467777777777776 34432 3567777777
Q ss_pred CCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcC
Q 010041 182 GNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPI 261 (519)
Q Consensus 182 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~ 261 (519)
+|.++ .+|.. .++|+.|++++|+++ .+|. ..++|+.|++++|++++. |.. ..+|+.|++++|.+++ +
T Consensus 271 ~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhc---hhhcCEEECcCCccc-cccc---cccccceeECCCCccccC-CCC---cccccccccccCcccc-c
Confidence 77765 34432 245667777777776 3443 235677777777776642 321 2346666777776653 3
Q ss_pred cccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCC
Q 010041 262 PSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFS 341 (519)
Q Consensus 262 ~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 341 (519)
|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|.+.. +|.. ..+|+.|++++|.+.+ +|.. .+
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred ccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---cc
Confidence 321 2356677777776663 4432 2456666677776663 4432 2456677777776663 3322 24
Q ss_pred CCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCccccchhhhcccCCCEEEccCCcccccccccc
Q 010041 342 ALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEI 409 (519)
Q Consensus 342 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 409 (519)
+|+.|++++|++++ +|.. ..+|+.|++++|+++ .+|..++.+++|+.|++++|++++..+..+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 56667777776663 4432 235566666666666 566666666667777777777666655544
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=1.8e-23 Score=211.60 Aligned_cols=290 Identities=32% Similarity=0.393 Sum_probs=206.0
Q ss_pred CCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEec
Q 010041 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDL 204 (519)
Q Consensus 125 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 204 (519)
++|+.|+.++|.+....+. ..-.+|+++++++|+++ .+|..++.+.+|+.++..+|+++ .+|..+...++|+.|.+
T Consensus 219 ~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 4455555555555522211 12346777777777776 45566677777777777777774 56666666777777777
Q ss_pred cCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCC-CceeecccccccCcCcccccCCCCcceeeccCccCcc
Q 010041 205 SSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKS-LTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNG 283 (519)
Q Consensus 205 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~-L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~ 283 (519)
.+|.+. .+|...+.++.|++|++..|++....+..+.-... |..++.+.|.+.......=..++.|+.|++.+|.+++
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 777776 45556666777777777777766443333332222 5555555555543321222245779999999999998
Q ss_pred cCChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCC
Q 010041 284 SIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTK 363 (519)
Q Consensus 284 ~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 363 (519)
..-+.+.++++|+.|+|+.|++.......+.++..|++|++++|.++ .+|..+..++.|++|...+|++. .+| ++..
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~ 450 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQ 450 (1081)
T ss_pred cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhh
Confidence 88888999999999999999998666667888999999999999998 67788899999999999999998 567 7889
Q ss_pred CCCCcEEEccCccCccc-cchhhhcccCCCEEEccCCccccccccccccCCCCCEEEccCC
Q 010041 364 LSHLKYLNLSSNLLSGQ-IPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHN 423 (519)
Q Consensus 364 l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 423 (519)
++.|+.+|++.|.++.. ++.... -++|++||++||.-...-...+..+..+...+++-+
T Consensus 451 l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 451 LPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred cCcceEEecccchhhhhhhhhhCC-CcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 99999999999999854 333322 279999999999854444455666667777776665
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=1.4e-20 Score=196.14 Aligned_cols=263 Identities=29% Similarity=0.379 Sum_probs=209.9
Q ss_pred CCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEec
Q 010041 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDL 204 (519)
Q Consensus 125 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 204 (519)
.+-..|+++.+.++ .+|..+. ++|+.|++.+|+++ .+|. ..++|++|++++|+++ .+|.. .++|++|++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeec
Confidence 45778999999998 6888775 58999999999998 4664 2588999999999998 45643 468999999
Q ss_pred cCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCccc
Q 010041 205 SSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGS 284 (519)
Q Consensus 205 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~ 284 (519)
++|.+. .+|.. .++|+.|++++|+++. +|. ..++|+.|++++|.+.+ +|.. ...|+.|++++|.+.+
T Consensus 270 s~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLT-HLPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchh-hhhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-
Confidence 999987 45542 3678899999999885 453 34789999999999986 3432 3468889999999874
Q ss_pred CChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCC
Q 010041 285 IPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKL 364 (519)
Q Consensus 285 ~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 364 (519)
+|.. ..+|++|++++|++.+ +|.. ..+|+.|++++|++.. +|.. ..+|+.|++++|++++ +|.. .
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~ 401 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---P 401 (788)
T ss_pred cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---c
Confidence 5542 2589999999999985 5543 3578899999999985 5543 3579999999999985 5543 3
Q ss_pred CCCcEEEccCccCccccchhhhcccCCCEEEccCCccccccccccccCCCCCEEEccCCcceeeeec
Q 010041 365 SHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLAH 431 (519)
Q Consensus 365 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 431 (519)
++|+.|++++|.+++ +|.. ..+|+.|++++|+++ .+|..+.+++.|+.+++++|++++....
T Consensus 402 s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 402 SELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred cCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 589999999999985 6653 347889999999998 6899999999999999999999987654
No 16
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=2.4e-19 Score=188.19 Aligned_cols=245 Identities=30% Similarity=0.483 Sum_probs=109.1
Q ss_pred CCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccC
Q 010041 127 LTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSS 206 (519)
Q Consensus 127 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~ 206 (519)
...|+++++.++ .+|..+. ++|+.|++++|.++ .+|..+. .+|++|++++|+++ .+|..+. ++|+.|++++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 344455444444 2333322 34455555555444 2333322 24555555555544 2333221 2455555555
Q ss_pred CcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCC
Q 010041 207 NKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIP 286 (519)
Q Consensus 207 n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~ 286 (519)
|.+. .+|..+. .+|+.|++++|++.. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|.+.. +|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP 320 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LP 320 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CC
Confidence 5544 3343332 245555555554442 333221 245555555554442 222221 244555555555542 33
Q ss_pred hhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCC
Q 010041 287 REIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSH 366 (519)
Q Consensus 287 ~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 366 (519)
..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|++. .+|..+ .++|++|++++|+++. +|..+. ..
T Consensus 321 ~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt~-LP~~l~--~s 389 (754)
T PRK15370 321 ETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALTN-LPENLP--AA 389 (754)
T ss_pred ccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCCC-CCHhHH--HH
Confidence 222 1355555555555543 333322 45555555555554 233322 2355555555555552 333332 24
Q ss_pred CcEEEccCccCccccchhh----hcccCCCEEEccCCccc
Q 010041 367 LKYLNLSSNLLSGQIPFAI----GKLFNLASLDLSKNKLS 402 (519)
Q Consensus 367 L~~L~l~~n~l~~~~~~~~----~~~~~L~~L~l~~n~l~ 402 (519)
|+.|++++|++. .+|..+ ..++.+..|++.+|+++
T Consensus 390 L~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 390 LQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 555555555555 333322 22345556666666554
No 17
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.79 E-value=6.5e-21 Score=175.84 Aligned_cols=306 Identities=23% Similarity=0.238 Sum_probs=198.8
Q ss_pred EECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccC-Cc
Q 010041 106 LDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDG-NK 184 (519)
Q Consensus 106 L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-n~ 184 (519)
.+-++-+++ .+|..+. +.-..++|..|.|+.+.|.+|+.+++|+.|||++|.|+..-|.+|.++.+|.+|.+.+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 344444444 3444332 3567788889999977778899999999999999999888888999998887777766 88
Q ss_pred CcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcCccc
Q 010041 185 LSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPST 264 (519)
Q Consensus 185 l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~ 264 (519)
|+......|+++..|+.|.+.-|++.-...+.+..++++..|.+.+|.+....-..+..+..++.+.+..|.+..
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic----- 202 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC----- 202 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----
Confidence 876555678888999999888888887777788888888888888887764443467777888888887776321
Q ss_pred ccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCCCCCC-CCCCcEEeCcCCccccCCc-hhhcCCCC
Q 010041 265 LFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGR-LTSLQILDLSSNQLHSSIP-LVIGNFSA 342 (519)
Q Consensus 265 l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~l~~n~l~~~~~-~~~~~~~~ 342 (519)
..+++.+..... ..|..++.........+...++...-+..+.. ...+.+--.+.+...+..| ..|..+++
T Consensus 203 dCnL~wla~~~a-------~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~ 275 (498)
T KOG4237|consen 203 DCNLPWLADDLA-------MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPN 275 (498)
T ss_pred ccccchhhhHHh-------hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhccc
Confidence 111221111110 01111122222222222222222211111111 0111111111222222222 35777788
Q ss_pred CCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCccccchhhhcccCCCEEEccCCccccccccccccCCCCCEEEccC
Q 010041 343 LSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNH 422 (519)
Q Consensus 343 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 422 (519)
|++|++++|++++.-+.+|....++++|.|..|++...-...|.++.+|+.|+|.+|+++...|..|..+..|..|++-.
T Consensus 276 L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~ 355 (498)
T KOG4237|consen 276 LRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLS 355 (498)
T ss_pred ceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehcc
Confidence 88888888888877777788888888888888877765566677778888888888888877788888888888888877
Q ss_pred Ccce
Q 010041 423 NSLN 426 (519)
Q Consensus 423 n~l~ 426 (519)
|++.
T Consensus 356 Np~~ 359 (498)
T KOG4237|consen 356 NPFN 359 (498)
T ss_pred Cccc
Confidence 7764
No 18
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=2e-20 Score=182.41 Aligned_cols=106 Identities=25% Similarity=0.204 Sum_probs=57.3
Q ss_pred EEECCCCccc-cccchhhcCCCCCCEEEcccCcCCcc----CCccccCCCCCCEEEccCCCCCc------cCCccccCCC
Q 010041 105 YLDLGSNNLS-GSIPSQIDSLSNLTYIYLYENNLTGT----IPKEIGSLRNLEVLDLGSNNLNG------TIPIEIGSVR 173 (519)
Q Consensus 105 ~L~l~~n~~~-~~~~~~l~~l~~L~~L~L~~n~~~~~----~p~~~~~l~~L~~L~L~~n~l~~------~~p~~l~~l~ 173 (519)
.|+|..+.++ ......+..++.|++|+++++.++.. ++..+...+.|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4566666665 33445566666777777777776432 44445556667777777665542 1222344455
Q ss_pred CCCEEEccCCcCcccCchhccCCCC---CCEEeccCCcCC
Q 010041 174 NLETLSLDGNKLSGTIPIEIESLRN---LQWLDLSSNKLS 210 (519)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~l~~l~~---L~~L~l~~n~l~ 210 (519)
+|+.|++++|.+.+..+..+..+.. |++|++++|.++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~ 121 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLG 121 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccc
Confidence 5555555555554333333333333 555555555444
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=2e-20 Score=182.49 Aligned_cols=277 Identities=25% Similarity=0.323 Sum_probs=144.6
Q ss_pred EEEcccCcCC-ccCCccccCCCCCCEEEccCCCCCc----cCCccccCCCCCCEEEccCCcCcc------cCchhccCCC
Q 010041 129 YIYLYENNLT-GTIPKEIGSLRNLEVLDLGSNNLNG----TIPIEIGSVRNLETLSLDGNKLSG------TIPIEIESLR 197 (519)
Q Consensus 129 ~L~L~~n~~~-~~~p~~~~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~------~~p~~l~~l~ 197 (519)
.|+|..+.++ ...+..+..+++|++|+++++.++. .++..+...++|++++++++.+.+ .++..+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4566666665 3344455566778888888777643 234445566667777777776652 2234455566
Q ss_pred CCCEEeccCCcCCCCCCcccCCcCc---cCeeeCCCCcCCC----cCChhhccC-CCCceeecccccccCcCcccccCCC
Q 010041 198 NLQWLDLSSNKLSGTIPKEIGSLRN---LKELDLSSNKLGG----VLPQEIENL-KSLTALSMDANNLGGPIPSTLFRLT 269 (519)
Q Consensus 198 ~L~~L~l~~n~l~~~~p~~l~~l~~---L~~L~l~~n~l~~----~~p~~l~~~-~~L~~L~l~~n~l~~~~~~~l~~~~ 269 (519)
+|++|++++|.+.+..+..+..+.+ |++|++++|.+.+ .+...+..+ ++|+.|++++|.+++....
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------ 155 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE------ 155 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH------
Confidence 6666666666665444444433333 6666666655542 111222333 4444444444444421110
Q ss_pred CcceeeccCccCcccCChhccCCCCCCEEeccCCccccc----CCCCCCCCCCCcEEeCcCCccccC----CchhhcCCC
Q 010041 270 NIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGH----IPSTLGRLTSLQILDLSSNQLHSS----IPLVIGNFS 341 (519)
Q Consensus 270 ~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~----~~~~~~~~~ 341 (519)
.++..+..+++|++|++++|.+.+. ++..+..+++|++|++++|.+.+. +...+..++
T Consensus 156 --------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~ 221 (319)
T cd00116 156 --------------ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLK 221 (319)
T ss_pred --------------HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccC
Confidence 1222333444555555555555421 122233344566666666655432 222344556
Q ss_pred CCCEEECcCCcCcccCCCCCC-----CCCCCcEEEccCccCcc----ccchhhhcccCCCEEEccCCccccc----cccc
Q 010041 342 ALSYLDLSDNRICGIIPDELT-----KLSHLKYLNLSSNLLSG----QIPFAIGKLFNLASLDLSKNKLSGS----IPTE 408 (519)
Q Consensus 342 ~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~----~~~~~~~~~~~L~~L~l~~n~l~~~----~~~~ 408 (519)
+|++|++++|.+++.....+. ..+.|++|++++|.+++ .+...+..+++|+++++++|.++.. +...
T Consensus 222 ~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 301 (319)
T cd00116 222 SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAES 301 (319)
T ss_pred CCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHH
Confidence 666666666665542111111 13567777777776652 2233445556777777777777644 3333
Q ss_pred cccC-CCCCEEEccCCcc
Q 010041 409 IGNC-SELRNLTLNHNSL 425 (519)
Q Consensus 409 l~~l-~~L~~L~l~~n~l 425 (519)
+... +.++.+++.+|++
T Consensus 302 ~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 302 LLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhhcCCchhhcccCCCCC
Confidence 3333 5677777777653
No 20
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.78 E-value=1.6e-18 Score=182.15 Aligned_cols=248 Identities=29% Similarity=0.489 Sum_probs=196.2
Q ss_pred CCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeC
Q 010041 149 RNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDL 228 (519)
Q Consensus 149 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 228 (519)
.+...|+++++.++ .+|..+. ++|+.|++++|+++ .+|..+. ++|++|++++|.++ .+|..+. .+|+.|++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 46788999999887 5676553 57999999999998 5676554 58999999999998 5676553 57999999
Q ss_pred CCCcCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCccccc
Q 010041 229 SSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGH 308 (519)
Q Consensus 229 ~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~ 308 (519)
++|.+. .+|..+. .+|+.|++++|.+. .+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|.+..
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-
Confidence 999988 5566553 58999999999998 4666553 589999999999984 555443 479999999999984
Q ss_pred CCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccCccccchhhhcc
Q 010041 309 IPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKL 388 (519)
Q Consensus 309 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 388 (519)
+|..+ .++|+.|++++|.+++ +|..+ .++|+.|++++|+++ .+|..+. ++|++|++++|.++ .+|..+.
T Consensus 319 LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~-- 387 (754)
T PRK15370 319 LPETL--PPGLKTLEAGENALTS-LPASL--PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP-- 387 (754)
T ss_pred CCccc--cccceeccccCCcccc-CChhh--cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--
Confidence 45443 3689999999999985 55544 379999999999998 4665553 68999999999998 5666654
Q ss_pred cCCCEEEccCCcccccccccc----ccCCCCCEEEccCCccee
Q 010041 389 FNLASLDLSKNKLSGSIPTEI----GNCSELRNLTLNHNSLNG 427 (519)
Q Consensus 389 ~~L~~L~l~~n~l~~~~~~~l----~~l~~L~~L~l~~n~l~~ 427 (519)
..|+.|++++|++. .+|..+ ..++.+..+++.+|+++.
T Consensus 388 ~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 388 AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 36999999999998 455544 455888999999999874
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=1.2e-18 Score=143.07 Aligned_cols=154 Identities=35% Similarity=0.566 Sum_probs=75.6
Q ss_pred CCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEE
Q 010041 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (519)
Q Consensus 100 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (519)
+.+.+.|.+++|+++ .+|+.+..+.+|+.|++.+|++. .+|.+++.+++|+.|++.-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 344444555555554 33334555555555555555554 44445555555555555555443 4455555555555555
Q ss_pred ccCCcCcc-cCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeeccccccc
Q 010041 180 LDGNKLSG-TIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLG 258 (519)
Q Consensus 180 L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~ 258 (519)
|.+|++.. .+|..|..++.|+.|+++.|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 55554432 34444444455555555555544 34444555555555555554443 33444444555555555554443
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.66 E-value=1.7e-18 Score=142.08 Aligned_cols=155 Identities=33% Similarity=0.542 Sum_probs=93.0
Q ss_pred CCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEE
Q 010041 123 SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWL 202 (519)
Q Consensus 123 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 202 (519)
.+.+.+.|.|++|+++ .+|..+..+.+|+.|++.+|++. .+|..++.+++|+.|+++-|++. .+|..|+.+|.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3455566666777666 45555666667777777666665 55666666667777776666665 566666666666666
Q ss_pred eccCCcCCC-CCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccC
Q 010041 203 DLSSNKLSG-TIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRF 281 (519)
Q Consensus 203 ~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~ 281 (519)
++.+|++.. ..|..|..++.|+.|.+++|.+. .+|..++++++|+.|.+..|.+- ..|..++.++.|++|++.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 666666552 34555555566666666666655 34445555555555555555543 3444444455555555555544
Q ss_pred c
Q 010041 282 N 282 (519)
Q Consensus 282 ~ 282 (519)
+
T Consensus 186 ~ 186 (264)
T KOG0617|consen 186 T 186 (264)
T ss_pred e
Confidence 4
No 23
>PLN03150 hypothetical protein; Provisional
Probab=99.52 E-value=9.5e-14 Score=145.66 Aligned_cols=152 Identities=32% Similarity=0.531 Sum_probs=114.0
Q ss_pred CChhhHHHHHHHHHhccCC--CCCCCCCCCCCCCCC-----CcceeeeCCCCCEEEEEcCCCceecccCCCCCCCCCCCc
Q 010041 32 NISIHVAASEIERQALLNS--GWWKDRIPQNTSDHC-----GWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQ 104 (519)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~C-----~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~ 104 (519)
..+.+..++..+|+.+... ..|.. ++| .|.|+.|...... ....++
T Consensus 369 t~~~~~~aL~~~k~~~~~~~~~~W~g-------~~C~p~~~~w~Gv~C~~~~~~--------------------~~~~v~ 421 (623)
T PLN03150 369 TLLEEVSALQTLKSSLGLPLRFGWNG-------DPCVPQQHPWSGADCQFDSTK--------------------GKWFID 421 (623)
T ss_pred cCchHHHHHHHHHHhcCCcccCCCCC-------CCCCCcccccccceeeccCCC--------------------CceEEE
Confidence 4455778888888887542 25632 344 6999999532110 001245
Q ss_pred EEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCc
Q 010041 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNK 184 (519)
Q Consensus 105 ~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 184 (519)
.|+|++|.+.|.+|..+.++++|+.|+|++|.+.|.+|..++.+++|+.|+|++|.++|.+|..++++++|++|+|++|+
T Consensus 422 ~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~ 501 (623)
T PLN03150 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501 (623)
T ss_pred EEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCc
Confidence 67888888888888888888999999999888888888888888888888888888888888888888888888888888
Q ss_pred CcccCchhccCC-CCCCEEeccCCcCC
Q 010041 185 LSGTIPIEIESL-RNLQWLDLSSNKLS 210 (519)
Q Consensus 185 l~~~~p~~l~~l-~~L~~L~l~~n~l~ 210 (519)
++|.+|..++.. .++..+++.+|...
T Consensus 502 l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 502 LSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred ccccCChHHhhccccCceEEecCCccc
Confidence 888888777653 35566777766543
No 24
>PLN03150 hypothetical protein; Provisional
Probab=99.19 E-value=3.8e-11 Score=126.17 Aligned_cols=109 Identities=32% Similarity=0.571 Sum_probs=96.9
Q ss_pred CCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCC
Q 010041 150 NLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLS 229 (519)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 229 (519)
.++.|+|++|.+.|.+|..+..+++|+.|+|++|++.|.+|..++++++|+.|++++|.+++.+|..++++++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCcCChhhccC-CCCceeeccccccc
Q 010041 230 SNKLGGVLPQEIENL-KSLTALSMDANNLG 258 (519)
Q Consensus 230 ~n~l~~~~p~~l~~~-~~L~~L~l~~n~l~ 258 (519)
+|.+++.+|..+... .++..+++.+|...
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccc
Confidence 999999999887653 46678888887643
No 25
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.19 E-value=6.5e-13 Score=128.94 Aligned_cols=194 Identities=29% Similarity=0.510 Sum_probs=141.2
Q ss_pred CCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEE
Q 010041 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (519)
Q Consensus 100 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (519)
+..-...|++.|++. .+|..+..+..|+.+.|.+|.+. .+|..++++..|.+|+|+.|+++ .+|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444556777888776 56777777778888888888777 67778888888888888888886 6677777765 78888
Q ss_pred ccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccC
Q 010041 180 LDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGG 259 (519)
Q Consensus 180 L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~ 259 (519)
+++|+++ .+|..++.++.|..|+.+.|.+. .+|..++.+.+|+.|.+..|++.. +|..+.. -.|..||++.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~~-LpLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELCS-LPLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHhC-CceeeeecccCcee-
Confidence 8888876 67777787788888888888876 567778888888888888887774 4455553 35778888888776
Q ss_pred cCcccccCCCCcceeeccCccCcccCChhccCC---CCCCEEeccCC
Q 010041 260 PIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNL---KNLTSLSLGGN 303 (519)
Q Consensus 260 ~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~---~~L~~L~l~~n 303 (519)
.+|..|.+|..|++|.|.+|.+.. -|..++.. .=.++|+...+
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLqS-PPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQS-PPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCCC-ChHHHHhccceeeeeeecchhc
Confidence 677788888888888888887763 34433322 12345555555
No 26
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.18 E-value=4.1e-11 Score=120.31 Aligned_cols=180 Identities=44% Similarity=0.656 Sum_probs=89.9
Q ss_pred CCCCCEEEccCCCCCccCCccccCCC-CCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCee
Q 010041 148 LRNLEVLDLGSNNLNGTIPIEIGSVR-NLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKEL 226 (519)
Q Consensus 148 l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 226 (519)
++.++.|++.+|.++ .+|....... +|+.|++++|++. .+|..+..+++|+.|+++.|++. .+|...+..++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 344555555555444 3333333332 4555555555544 33334445555555555555554 333333344555555
Q ss_pred eCCCCcCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCccc
Q 010041 227 DLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLT 306 (519)
Q Consensus 227 ~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~ 306 (519)
++++|++.. +|........|+++.+++|... ..+..+.++.++..+.+.+|++. .++..+..++.++.|++++|.++
T Consensus 192 ~ls~N~i~~-l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKISD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCcccc-CchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc
Confidence 555555542 2333233344555555555321 23334445555555555555544 22455556666677777776666
Q ss_pred ccCCCCCCCCCCCcEEeCcCCccccCCch
Q 010041 307 GHIPSTLGRLTSLQILDLSSNQLHSSIPL 335 (519)
Q Consensus 307 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 335 (519)
... . ++.+.+++.|++++|.+....+.
T Consensus 269 ~i~-~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 269 SIS-S-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred ccc-c-ccccCccCEEeccCccccccchh
Confidence 332 2 66666777777777766654443
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.18 E-value=5.5e-11 Score=119.39 Aligned_cols=197 Identities=39% Similarity=0.601 Sum_probs=109.0
Q ss_pred EEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCC-CCCEEeccCCcCCCCCCcccCCcCccCeeeCCCC
Q 010041 153 VLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLR-NLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSN 231 (519)
Q Consensus 153 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n 231 (519)
.+++..+.+... ...+..++.++.|++.+|+++ .++.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 455555554322 123344456666666666665 3444444443 6666666666665 34445566666666666666
Q ss_pred cCCCcCChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCC
Q 010041 232 KLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPS 311 (519)
Q Consensus 232 ~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~ 311 (519)
++... |......+.|+.|++++|.+. .+|........|+++.+++|... ..+..+.++.++..+.+.+|++.. .+.
T Consensus 174 ~l~~l-~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLSDL-PKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhhhh-hhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 66533 333335566666666666665 33333334444666666666432 344455556666666666665542 244
Q ss_pred CCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCC
Q 010041 312 TLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIP 358 (519)
Q Consensus 312 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 358 (519)
.++.+++++.|++++|.++.... ++...+++.|++++|.+....+
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 55566666666666666654332 5556666666666666655444
No 28
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.17 E-value=4e-12 Score=116.72 Aligned_cols=247 Identities=24% Similarity=0.347 Sum_probs=140.0
Q ss_pred ccCCCCCCEEEccCCcCccc----CchhccCCCCCCEEeccCCc---CCCCCCcc-------cCCcCccCeeeCCCCcCC
Q 010041 169 IGSVRNLETLSLDGNKLSGT----IPIEIESLRNLQWLDLSSNK---LSGTIPKE-------IGSLRNLKELDLSSNKLG 234 (519)
Q Consensus 169 l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~n~---l~~~~p~~-------l~~l~~L~~L~l~~n~l~ 234 (519)
+.....++.++|++|.+... +...+.+.+.|+..+++.-. +...+|.. +..+++|++++||+|-+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 33456677777777776432 33345556667766666421 11123322 223445666666666554
Q ss_pred CcCChh----hccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCccccc--
Q 010041 235 GVLPQE----IENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGH-- 308 (519)
Q Consensus 235 ~~~p~~----l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~-- 308 (519)
...+.. +..+..|++|.|.+|.++..--..++. .|..|. ........+.|+++...+|++...
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~---------~~kk~~~~~~Lrv~i~~rNrlen~ga 174 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA---------VNKKAASKPKLRVFICGRNRLENGGA 174 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH---------HHhccCCCcceEEEEeeccccccccH
Confidence 332222 234445555555555443111110000 011111 011123345677777777776532
Q ss_pred --CCCCCCCCCCCcEEeCcCCccccC----CchhhcCCCCCCEEECcCCcCcc----cCCCCCCCCCCCcEEEccCccCc
Q 010041 309 --IPSTLGRLTSLQILDLSSNQLHSS----IPLVIGNFSALSYLDLSDNRICG----IIPDELTKLSHLKYLNLSSNLLS 378 (519)
Q Consensus 309 --~~~~l~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~ 378 (519)
+...+...+.|+.+.+..|.+... +...+..+++|++|+|.+|-++. .+...++.+++|+++++++|.+.
T Consensus 175 ~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 175 TALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred HHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccc
Confidence 223455567777777777776432 22346678888888888887764 23355667778888888888887
Q ss_pred cccchhh-----hcccCCCEEEccCCccccc----cccccccCCCCCEEEccCCcce
Q 010041 379 GQIPFAI-----GKLFNLASLDLSKNKLSGS----IPTEIGNCSELRNLTLNHNSLN 426 (519)
Q Consensus 379 ~~~~~~~-----~~~~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~ 426 (519)
..-..++ ...++|+.|.+.+|.++.. +...+...+.|+.|++++|.+.
T Consensus 255 ~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 255 NEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 5544433 3467899999999987642 3344556788999999999874
No 29
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.14 E-value=1.9e-12 Score=125.72 Aligned_cols=177 Identities=31% Similarity=0.526 Sum_probs=131.5
Q ss_pred CCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCC
Q 010041 95 LNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRN 174 (519)
Q Consensus 95 ~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 174 (519)
..+..|..|+.+.++.|.+. .+|.++.++..|.+|+|+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.++.
T Consensus 92 ~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~t 167 (722)
T KOG0532|consen 92 EEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPT 167 (722)
T ss_pred hHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchh
Confidence 34455666778888888775 66778888888888888888888 6777777666 888888888886 77888888888
Q ss_pred CCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeeccc
Q 010041 175 LETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDA 254 (519)
Q Consensus 175 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~ 254 (519)
|..|+.+.|.+. .+|..++.+.+|+.|.+..|++. .+|..+..+ .|..||++.|++. .+|-.|.+++.|++|.|.+
T Consensus 168 l~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~Len 243 (722)
T KOG0532|consen 168 LAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLEN 243 (722)
T ss_pred HHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeecc
Confidence 888888888876 67778888888888888888887 566666644 4788888888887 5677888888888888888
Q ss_pred ccccCcCccccc---CCCCcceeeccCcc
Q 010041 255 NNLGGPIPSTLF---RLTNIEYLSLGFNR 280 (519)
Q Consensus 255 n~l~~~~~~~l~---~~~~L~~L~l~~n~ 280 (519)
|.+... |..++ ...-.++|+...|+
T Consensus 244 NPLqSP-PAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 244 NPLQSP-PAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred CCCCCC-hHHHHhccceeeeeeecchhcc
Confidence 887643 32222 23334555555553
No 30
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.13 E-value=4.4e-12 Score=116.46 Aligned_cols=199 Identities=21% Similarity=0.286 Sum_probs=102.0
Q ss_pred ccCCCCCCEEeccCCcCCCCCCcc----cCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcCcccccCC
Q 010041 193 IESLRNLQWLDLSSNKLSGTIPKE----IGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRL 268 (519)
Q Consensus 193 l~~l~~L~~L~l~~n~l~~~~p~~----l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~ 268 (519)
+...++|++++||.|.+....++. +.++..|++|.+.+|.+...--..++. .|..|. .+. ....-
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~ 156 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASK 156 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCC
Confidence 344556666666666665444333 345667777777777665221111110 111111 000 11122
Q ss_pred CCcceeeccCccCccc----CChhccCCCCCCEEeccCCccccc----CCCCCCCCCCCcEEeCcCCccccC----Cchh
Q 010041 269 TNIEYLSLGFNRFNGS----IPREIVNLKNLTSLSLGGNKLTGH----IPSTLGRLTSLQILDLSSNQLHSS----IPLV 336 (519)
Q Consensus 269 ~~L~~L~l~~n~~~~~----~~~~l~~~~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~----~~~~ 336 (519)
+.|+++..++|++... +...+...+.|+.+.++.|.+... +...+..+++|+.||+..|.++.. +...
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 3444444444443321 112333445555555555554311 122344556666666666665432 2233
Q ss_pred hcCCCCCCEEECcCCcCcccCCCCC-----CCCCCCcEEEccCccCccc----cchhhhcccCCCEEEccCCccc
Q 010041 337 IGNFSALSYLDLSDNRICGIIPDEL-----TKLSHLKYLNLSSNLLSGQ----IPFAIGKLFNLASLDLSKNKLS 402 (519)
Q Consensus 337 ~~~~~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~ 402 (519)
+..++.|+.|++++|.+.......+ ...+.|+++.+.+|.++-. +..++...+.|..|+|++|++.
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 4556666666666666553222111 2356778888888877632 3445566788999999999984
No 31
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.09 E-value=6.9e-11 Score=126.89 Aligned_cols=128 Identities=26% Similarity=0.372 Sum_probs=68.5
Q ss_pred CCCCcEEECCCCccccccchhhcCCCCCCEEEcccCc--CCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCE
Q 010041 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENN--LTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLET 177 (519)
Q Consensus 100 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~--~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 177 (519)
....+...+.+|.+.. ++.. ..+++|++|-+..|. +....+..|..++.|++|||++|.--+.+|..++++-+|++
T Consensus 522 ~~~~rr~s~~~~~~~~-~~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEH-IAGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchhh-ccCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 3445555555554431 1111 123356666665554 33222233555666666666665554566666666666666
Q ss_pred EEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCC
Q 010041 178 LSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSS 230 (519)
Q Consensus 178 L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~ 230 (519)
|+++++.+. .+|..++++.+|.+|++..+.-...+|.....+++|++|.+..
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeec
Confidence 666666655 5566666666666666665554444444444466666665544
No 32
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.09 E-value=7e-11 Score=126.87 Aligned_cols=108 Identities=28% Similarity=0.357 Sum_probs=65.4
Q ss_pred CCCCcEEECCCCc--cccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCE
Q 010041 100 FPNLQYLDLGSNN--LSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLET 177 (519)
Q Consensus 100 l~~L~~L~l~~n~--~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 177 (519)
.++|++|-+..|. +.......|..++.|++|||++|.--+.+|..++.+-+|++|+++++.+. .+|..+.++.+|.+
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 3456666666664 33223334566666666666666555566666666666666666666665 56666666666666
Q ss_pred EEccCCcCcccCchhccCCCCCCEEeccCCc
Q 010041 178 LSLDGNKLSGTIPIEIESLRNLQWLDLSSNK 208 (519)
Q Consensus 178 L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 208 (519)
|++..+.....+|.....+++|++|.+....
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccc
Confidence 6666665444445555556666666665443
No 33
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=2.9e-11 Score=118.15 Aligned_cols=94 Identities=33% Similarity=0.489 Sum_probs=68.2
Q ss_pred cceeeeecceeccccccccchhhhhcccccCCCCccccc--------ccccCCCCCcchhhhhhhccC-CCCChhHHHHH
Q 010041 424 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLS--------SLSSSSGPKIMLINVLDQRLS-PPVNQKIVQDI 494 (519)
Q Consensus 424 ~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~--------~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~ 494 (519)
++.+++..+..+++|.||||||++++|++||+.|.+.-. .|......+..+.+++|+++. ...+. .+++
T Consensus 244 Y~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~--~~~~ 321 (361)
T KOG1187|consen 244 YLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPD--EKEV 321 (361)
T ss_pred cCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCCh--HHHH
Confidence 344455556789999999999999999999998876321 121122223356678888876 33221 1577
Q ss_pred HHHHHHHHHhcCCCCCCCCCcccCC
Q 010041 495 ILVSTIAFACLSSQPKSRPTMQRIS 519 (519)
Q Consensus 495 ~~~~~la~~C~~~~p~~RP~m~~v~ 519 (519)
.+++.+|+.|++.+|.+||+|.||+
T Consensus 322 ~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 322 KKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred HHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 7788999999999999999999974
No 34
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.07 E-value=2.1e-11 Score=109.53 Aligned_cols=162 Identities=30% Similarity=0.365 Sum_probs=122.0
Q ss_pred hhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCC
Q 010041 287 REIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSH 366 (519)
Q Consensus 287 ~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 366 (519)
..+..++.|+++|+++|.++ .+.+.+.-.|.++.|++++|.+.... .+..+++|+.|++++|.++. +..+-.++.+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLAE-CVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhHh-hhhhHhhhcC
Confidence 34445678999999999887 45667777899999999999987433 26778999999999998874 4445567889
Q ss_pred CcEEEccCccCccccchhhhcccCCCEEEccCCccccc-cccccccCCCCCEEEccCCcceeeeecceeccccccccchh
Q 010041 367 LKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGS-IPTEIGNCSELRNLTLNHNSLNGKLAHTMVVTEKCDVYSFG 445 (519)
Q Consensus 367 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~dv~sfg 445 (519)
++.|.|++|.+.. -.+++.+.+|.+||+++|++... -...|+++|.|+.+.+.+|++++...+--++.+ -||
T Consensus 354 IKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdYRTKVLa-----~FG 426 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDYRTKVLA-----RFG 426 (490)
T ss_pred EeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchHHHHHHH-----HHh
Confidence 9999999998763 24677888999999999998753 346789999999999999999987766444333 245
Q ss_pred hhhccc-ccCCCCcc
Q 010041 446 VVALEI-LMGRHPGE 459 (519)
Q Consensus 446 ~~~le~-l~g~~p~~ 459 (519)
--+-|+ +-|+.|.+
T Consensus 427 ERaSE~~LD~~~~~~ 441 (490)
T KOG1259|consen 427 ERASEISLDNEPGNQ 441 (490)
T ss_pred hhhhheecCCCCcch
Confidence 444444 34555543
No 35
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=3.9e-11 Score=113.28 Aligned_cols=136 Identities=22% Similarity=0.216 Sum_probs=61.9
Q ss_pred CCCCCEEeccCCcCCCC-CCcccCCcCccCeeeCCCCcCCCcCChhhccCCCCceeecccccccCcC-cccccCCCCcce
Q 010041 196 LRNLQWLDLSSNKLSGT-IPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPI-PSTLFRLTNIEY 273 (519)
Q Consensus 196 l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~-~~~l~~~~~L~~ 273 (519)
++.|+.|.++.|.++.. +-..+..+|+|+.|++..|...........-+..|+.|+|++|++-..- -...+.++.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 34444555555444411 1111223445555555544311111112223344555555555443211 122334555555
Q ss_pred eeccCccCccc-CCh-----hccCCCCCCEEeccCCccccc-CCCCCCCCCCCcEEeCcCCcccc
Q 010041 274 LSLGFNRFNGS-IPR-----EIVNLKNLTSLSLGGNKLTGH-IPSTLGRLTSLQILDLSSNQLHS 331 (519)
Q Consensus 274 L~l~~n~~~~~-~~~-----~l~~~~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~ 331 (519)
|.++.+.+... .|+ ....+++|++|++..|++... .-..+..+++|+.|.+..|.+..
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 55555544321 111 134567788888888877421 11233445667777777776653
No 36
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=3.5e-11 Score=113.66 Aligned_cols=209 Identities=29% Similarity=0.310 Sum_probs=108.1
Q ss_pred cCCCCCCEEEccCCCCCccCC--ccccCCCCCCEEEccCCcCccc--CchhccCCCCCCEEeccCCcCCCCCCccc-CCc
Q 010041 146 GSLRNLEVLDLGSNNLNGTIP--IEIGSVRNLETLSLDGNKLSGT--IPIEIESLRNLQWLDLSSNKLSGTIPKEI-GSL 220 (519)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~n~l~~~--~p~~l~~l~~L~~L~l~~n~l~~~~p~~l-~~l 220 (519)
+++.+|+...|.++.+. ..+ .....|++++.|||++|-+..- +......+|+|+.|+++.|.+........ ..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 35677888888777664 222 2455678888888888766432 22334567888888888887763322111 234
Q ss_pred CccCeeeCCCCcCCCc-CChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEe
Q 010041 221 RNLKELDLSSNKLGGV-LPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLS 299 (519)
Q Consensus 221 ~~L~~L~l~~n~l~~~-~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~ 299 (519)
+.|+.|.++.|+++-. +-..+..+++|+.|++..|..... .......++.|++|+
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~------------------------~~~~~~i~~~L~~Ld 252 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILI------------------------KATSTKILQTLQELD 252 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccce------------------------ecchhhhhhHHhhcc
Confidence 5666666666665521 112233455555555555531111 111222334455555
Q ss_pred ccCCcccccC-CCCCCCCCCCcEEeCcCCccccC-Cchh-----hcCCCCCCEEECcCCcCccc-CCCCCCCCCCCcEEE
Q 010041 300 LGGNKLTGHI-PSTLGRLTSLQILDLSSNQLHSS-IPLV-----IGNFSALSYLDLSDNRICGI-IPDELTKLSHLKYLN 371 (519)
Q Consensus 300 l~~n~l~~~~-~~~l~~l~~L~~L~l~~n~l~~~-~~~~-----~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ 371 (519)
|++|.+-... -...+.++.|+.|+++.+.+... .|.. ...+++|++|++..|++.+. .-..+..+++|++|.
T Consensus 253 Ls~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 253 LSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLR 332 (505)
T ss_pred ccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhh
Confidence 5555443211 12334455555555555554421 1111 23466677777777766421 112334455666666
Q ss_pred ccCccCcc
Q 010041 372 LSSNLLSG 379 (519)
Q Consensus 372 l~~n~l~~ 379 (519)
+..|.++.
T Consensus 333 ~~~n~ln~ 340 (505)
T KOG3207|consen 333 ITLNYLNK 340 (505)
T ss_pred cccccccc
Confidence 66666553
No 37
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.00 E-value=4.7e-10 Score=96.73 Aligned_cols=107 Identities=34% Similarity=0.476 Sum_probs=30.3
Q ss_pred CCCCCCEEEcccCcCCccCCcccc-CCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhc-cCCCCCC
Q 010041 123 SLSNLTYIYLYENNLTGTIPKEIG-SLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEI-ESLRNLQ 200 (519)
Q Consensus 123 ~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~ 200 (519)
+..+++.|+|++|.|+. + +.++ .+.+|+.|++++|.++. +. .+..+++|++|++++|+++. +...+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred ccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 34456666666666663 2 2343 45667777777776653 22 35566677777777777663 32233 3466777
Q ss_pred EEeccCCcCCCCC-CcccCCcCccCeeeCCCCcCC
Q 010041 201 WLDLSSNKLSGTI-PKEIGSLRNLKELDLSSNKLG 234 (519)
Q Consensus 201 ~L~l~~n~l~~~~-p~~l~~l~~L~~L~l~~n~l~ 234 (519)
+|++++|++...- -..++.+++|+.|++.+|.++
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 7777777665321 133455666666666666655
No 38
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.97 E-value=1.9e-10 Score=103.57 Aligned_cols=105 Identities=26% Similarity=0.340 Sum_probs=47.7
Q ss_pred CCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccCCCCCCCCCCCcEEe
Q 010041 244 LKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILD 323 (519)
Q Consensus 244 ~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 323 (519)
...|+++++++|.++ .+.+.+.-.+.++.|++++|.+.. + ..+..+++|+.||+++|.++. +..+-..+-+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeee
Confidence 334555555555443 233333344555555555555442 1 224455555555555555442 222223344555555
Q ss_pred CcCCccccCCchhhcCCCCCCEEECcCCcCc
Q 010041 324 LSSNQLHSSIPLVIGNFSALSYLDLSDNRIC 354 (519)
Q Consensus 324 l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 354 (519)
++.|.+.. -..++.+.+|..|++++|++.
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchh
Confidence 55554431 112334444555555555443
No 39
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.91 E-value=1.6e-09 Score=93.46 Aligned_cols=105 Identities=30% Similarity=0.390 Sum_probs=25.8
Q ss_pred CcceeeccCccCcccCChhcc-CCCCCCEEeccCCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEEC
Q 010041 270 NIEYLSLGFNRFNGSIPREIV-NLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDL 348 (519)
Q Consensus 270 ~L~~L~l~~n~~~~~~~~~l~-~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 348 (519)
.+++|+|.+|.+.. + ..+. .+.+|+.|++++|.+... +.+..+++|+.|++++|.++...+.....+++|+.|++
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 34455555554442 1 1232 345566666666666532 23555666666666666666432222234666666666
Q ss_pred cCCcCcccCC-CCCCCCCCCcEEEccCccCc
Q 010041 349 SDNRICGIIP-DELTKLSHLKYLNLSSNLLS 378 (519)
Q Consensus 349 ~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~ 378 (519)
++|++...-. ..+..+++|++|++.+|.++
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 6666653110 12233444444444444433
No 40
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.86 E-value=3.2e-10 Score=114.03 Aligned_cols=224 Identities=30% Similarity=0.347 Sum_probs=94.9
Q ss_pred ccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccC
Q 010041 145 IGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLK 224 (519)
Q Consensus 145 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 224 (519)
+..+++|+.|++.+|.+... ...+..+++|++|++++|.|+... .+..++.|+.|++++|.+... ..+..+++|+
T Consensus 91 l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLK 165 (414)
T ss_pred cccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhh
Confidence 33444444444444444421 111334444555555555444321 233444455555555544421 1233344455
Q ss_pred eeeCCCCcCCCcCC-hhhccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCC--CCCEEecc
Q 010041 225 ELDLSSNKLGGVLP-QEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLK--NLTSLSLG 301 (519)
Q Consensus 225 ~L~l~~n~l~~~~p-~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~--~L~~L~l~ 301 (519)
.+++++|.+...-+ . ...+.+++.+.+.+|.+...- .+..+..+..+++..|.+...-+ +.... +|+.++++
T Consensus 166 ~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~ 240 (414)
T KOG0531|consen 166 LLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--GLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLS 240 (414)
T ss_pred cccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--chHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcc
Confidence 55555554443222 1 234444555555555443211 11112222223444444331110 11111 25566666
Q ss_pred CCcccccCCCCCCCCCCCcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCccc---CCC-CCCCCCCCcEEEccCccC
Q 010041 302 GNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGI---IPD-ELTKLSHLKYLNLSSNLL 377 (519)
Q Consensus 302 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~---~~~-~~~~l~~L~~L~l~~n~l 377 (519)
+|.+.. .+..+..+..+..+++.+|++...-. +...+.+..+....+.+... ... .....+.++...+..|..
T Consensus 241 ~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 241 GNRISR-SPEGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPI 317 (414)
T ss_pred cCcccc-ccccccccccccccchhhcccccccc--ccccchHHHhccCcchhcchhhhhccccccccccccccccccCcc
Confidence 665552 22344555666666666666543211 22233444444445444321 111 134455666666666666
Q ss_pred cccc
Q 010041 378 SGQI 381 (519)
Q Consensus 378 ~~~~ 381 (519)
....
T Consensus 318 ~~~~ 321 (414)
T KOG0531|consen 318 RKIS 321 (414)
T ss_pred cccc
Confidence 5433
No 41
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.5e-09 Score=74.98 Aligned_cols=59 Identities=42% Similarity=0.588 Sum_probs=27.9
Q ss_pred CCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCC
Q 010041 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNN 160 (519)
Q Consensus 102 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 160 (519)
+|++|++++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44445555554443333444444444444444444444444444444444444444443
No 42
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=4.3e-09 Score=74.51 Aligned_cols=60 Identities=38% Similarity=0.512 Sum_probs=35.6
Q ss_pred CCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCc
Q 010041 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNK 184 (519)
Q Consensus 125 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 184 (519)
++|++|++++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++|+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 355666666666665444556666666666666666655545555666666666666654
No 43
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.76 E-value=9.8e-10 Score=110.54 Aligned_cols=217 Identities=36% Similarity=0.422 Sum_probs=138.4
Q ss_pred CCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCee
Q 010041 147 SLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKEL 226 (519)
Q Consensus 147 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 226 (519)
.+..++.+++..|.+.. +-..+..+.+|..|++.+|++.+. ...+..+++|++|++++|.++... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 44556666676666653 223466788899999999998744 323677899999999999988543 46667779999
Q ss_pred eCCCCcCCCcCChhhccCCCCceeecccccccCcCc-ccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcc
Q 010041 227 DLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIP-STLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKL 305 (519)
Q Consensus 227 ~l~~n~l~~~~p~~l~~~~~L~~L~l~~n~l~~~~~-~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l 305 (519)
++.+|.++.. ..+..++.|+.+++++|.+...-+ . ...+.+++.+.+.+|.+.. ...+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccc
Confidence 9999988754 345557888888888888775544 2 4567778888888877652 23334444555557777776
Q ss_pred cccCCCCCCCCCC--CcEEeCcCCccccCCchhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcEEEccCccC
Q 010041 306 TGHIPSTLGRLTS--LQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLL 377 (519)
Q Consensus 306 ~~~~~~~l~~l~~--L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 377 (519)
...- .+..+.. |+.+++++|++... +..+..+..+..|++.+|++... ..+.....+..+....+.+
T Consensus 221 ~~~~--~l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 221 SKLE--GLNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKL 289 (414)
T ss_pred eecc--CcccchhHHHHHHhcccCccccc-cccccccccccccchhhcccccc--ccccccchHHHhccCcchh
Confidence 5332 2223333 77777777777632 23445566777777777766532 1223333444444444443
No 44
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=98.60 E-value=1.6e-08 Score=98.58 Aligned_cols=76 Identities=25% Similarity=0.468 Sum_probs=58.5
Q ss_pred cceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCC
Q 010041 431 HTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 431 ~~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p 509 (519)
...+++.|+|||||||+++|++| |+.|+.... +..+.+.++++-+-+.+..+++++. +|+..||+.+|
T Consensus 377 ~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--------n~ev~~~le~GyRlp~P~~CP~~vY---~lM~~CW~~~P 445 (468)
T KOG0197|consen 377 NYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--------NEEVLELLERGYRLPRPEGCPDEVY---ELMKSCWHEDP 445 (468)
T ss_pred hhCCcccccceeehhhhHHHHhccCCCCCCCCC--------HHHHHHHHhccCcCCCCCCCCHHHH---HHHHHHhhCCc
Confidence 45578899999999999999986 888876321 2234455666555556666777777 78999999999
Q ss_pred CCCCCccc
Q 010041 510 KSRPTMQR 517 (519)
Q Consensus 510 ~~RP~m~~ 517 (519)
++|||++.
T Consensus 446 ~~RPtF~~ 453 (468)
T KOG0197|consen 446 EDRPTFET 453 (468)
T ss_pred ccCCCHHH
Confidence 99999864
No 45
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.56 E-value=2e-08 Score=97.71 Aligned_cols=78 Identities=32% Similarity=0.500 Sum_probs=55.1
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
....++|+||||||+++||++||+.|++..... .....++....++..+......+. .++..||..+|+.
T Consensus 220 ~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-------~~~~~v~~~~~Rp~~p~~~~~~l~---~l~~~CW~~dp~~ 289 (362)
T KOG0192|consen 220 KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-------QVASAVVVGGLRPPIPKECPPHLS---SLMERCWLVDPSR 289 (362)
T ss_pred CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcCCCCCCCccCCHHHH---HHHHHhCCCCCCc
Confidence 446889999999999999999999999754321 111123333444443333444555 7788899999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.|++
T Consensus 290 RP~f~ei~ 297 (362)
T KOG0192|consen 290 RPSFLEIV 297 (362)
T ss_pred CCCHHHHH
Confidence 99999874
No 46
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.50 E-value=3.3e-08 Score=101.58 Aligned_cols=76 Identities=29% Similarity=0.491 Sum_probs=56.8
Q ss_pred cceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhh-hhccCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010041 431 HTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 431 ~~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
...++++++|||||||++||+++ |+.|+..+. +..+.+.+ ...+ -+++..++.++. .|++.||+..
T Consensus 678 ly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--------n~EVIe~i~~g~l-L~~Pe~CP~~vY---~LM~~CW~~~ 745 (774)
T KOG1026|consen 678 LYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--------NQEVIECIRAGQL-LSCPENCPTEVY---SLMLECWNEN 745 (774)
T ss_pred hcCcccchhhhhhhhhhhhhhhccccCcccccc--------hHHHHHHHHcCCc-ccCCCCCCHHHH---HHHHHHhhcC
Confidence 45678999999999999999985 999987432 22222323 3333 345666667766 8899999999
Q ss_pred CCCCCCcccC
Q 010041 509 PKSRPTMQRI 518 (519)
Q Consensus 509 p~~RP~m~~v 518 (519)
|.+||+++||
T Consensus 746 P~~RPsF~eI 755 (774)
T KOG1026|consen 746 PKRRPSFKEI 755 (774)
T ss_pred cccCCCHHHH
Confidence 9999999986
No 47
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.43 E-value=5.7e-08 Score=87.79 Aligned_cols=80 Identities=21% Similarity=0.294 Sum_probs=45.1
Q ss_pred CCCCCEEeccCCccccc-CCCCCCCCCCCcEEeCcCCccccC-CchhhcCCCCCCEEECcCCcCcccCCCC------CCC
Q 010041 292 LKNLTSLSLGGNKLTGH-IPSTLGRLTSLQILDLSSNQLHSS-IPLVIGNFSALSYLDLSDNRICGIIPDE------LTK 363 (519)
Q Consensus 292 ~~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~------~~~ 363 (519)
++++..+.+..|.+... -.+.....+.+.-|+++.+++..- .-..+..++.|..|.++++.+.+..... ++.
T Consensus 198 Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaR 277 (418)
T KOG2982|consen 198 FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIAR 277 (418)
T ss_pred cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEee
Confidence 34555666666654422 123344556666777777776532 1234566777788888877776544321 344
Q ss_pred CCCCcEEE
Q 010041 364 LSHLKYLN 371 (519)
Q Consensus 364 l~~L~~L~ 371 (519)
+++++.|+
T Consensus 278 L~~v~vLN 285 (418)
T KOG2982|consen 278 LTKVQVLN 285 (418)
T ss_pred ccceEEec
Confidence 55666554
No 48
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=5.8e-09 Score=94.07 Aligned_cols=177 Identities=24% Similarity=0.252 Sum_probs=90.9
Q ss_pred ccCeeeCCCCcCCCc-CChhhccCCCCceeecccccccCcCcccccCCCCcceeeccCcc-Ccc-cCChhccCCCCCCEE
Q 010041 222 NLKELDLSSNKLGGV-LPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNR-FNG-SIPREIVNLKNLTSL 298 (519)
Q Consensus 222 ~L~~L~l~~n~l~~~-~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~-~~~-~~~~~l~~~~~L~~L 298 (519)
.|+++|+++..++.. +-..+..+.+|+.|.+.++++.+.+...++.-.+|+.++++.+. ++. ...-.+.++++|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 355566655444321 11223455566666666666666665566666666666665542 111 011224456666666
Q ss_pred eccCCcccccCCC-CCC-CCCCCcEEeCcCCccc---cCCchhhcCCCCCCEEECcCCc-CcccCCCCCCCCCCCcEEEc
Q 010041 299 SLGGNKLTGHIPS-TLG-RLTSLQILDLSSNQLH---SSIPLVIGNFSALSYLDLSDNR-ICGIIPDELTKLSHLKYLNL 372 (519)
Q Consensus 299 ~l~~n~l~~~~~~-~l~-~l~~L~~L~l~~n~l~---~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l 372 (519)
+++.|.+....-. .+. --++|+.|+++++.-. ..+......+++|..|||++|. ++.....++-+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 6666655422100 111 1245666666655421 1222233457777777777763 33333334556677777777
Q ss_pred cCccCccccch---hhhcccCCCEEEccCCc
Q 010041 373 SSNLLSGQIPF---AIGKLFNLASLDLSKNK 400 (519)
Q Consensus 373 ~~n~l~~~~~~---~~~~~~~L~~L~l~~n~ 400 (519)
+.|.. .+|. .+...+.|.+|++.++-
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEecccc
Confidence 77653 2332 34556677777766553
No 49
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.32 E-value=1.3e-08 Score=102.27 Aligned_cols=124 Identities=29% Similarity=0.356 Sum_probs=66.2
Q ss_pred CCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCch-hccCCCCCCEEecc
Q 010041 127 LTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPI-EIESLRNLQWLDLS 205 (519)
Q Consensus 127 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~l~ 205 (519)
|...+.+.|.+. ....++.-++.|+.|+|++|+++.. +.+..+++|++|||++|.+.. +|. ....+. |+.|.++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhhh-heeeeec
Confidence 334444444444 2333444556666666666666532 255666666667776666652 231 122222 6666666
Q ss_pred CCcCCCCCCcccCCcCccCeeeCCCCcCCCcC-ChhhccCCCCceeecccccc
Q 010041 206 SNKLSGTIPKEIGSLRNLKELDLSSNKLGGVL-PQEIENLKSLTALSMDANNL 257 (519)
Q Consensus 206 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~-p~~l~~~~~L~~L~l~~n~l 257 (519)
+|.++.. ..+.++.+|+.||++.|-+.+.- -..+..+..|+.|++.+|.+
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 6666522 34566666666666666554321 11233445566666666654
No 50
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.30 E-value=1.2e-08 Score=92.16 Aligned_cols=180 Identities=24% Similarity=0.273 Sum_probs=88.7
Q ss_pred CCCEEEccCCcCccc-CchhccCCCCCCEEeccCCcCCCCCCcccCCcCccCeeeCCCCc-CCCcCChhhccCCCCceee
Q 010041 174 NLETLSLDGNKLSGT-IPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNK-LGGVLPQEIENLKSLTALS 251 (519)
Q Consensus 174 ~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~-l~~~~p~~l~~~~~L~~L~ 251 (519)
.|++|||++..++.. +-..++.+.+|+.|.++++++...+...++.-.+|+.|+++.+. ++..-..
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~------------ 253 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQ------------ 253 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHH------------
Confidence 356666666555421 12234455556666666666555555555555555555555542 2211000
Q ss_pred cccccccCcCcccccCCCCcceeeccCccCcccCChh-ccC-CCCCCEEeccCCccc---ccCCCCCCCCCCCcEEeCcC
Q 010041 252 MDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPRE-IVN-LKNLTSLSLGGNKLT---GHIPSTLGRLTSLQILDLSS 326 (519)
Q Consensus 252 l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~-l~~-~~~L~~L~l~~n~l~---~~~~~~l~~l~~L~~L~l~~ 326 (519)
-.+.+++.|..|++++|.+....-.. +.+ -++|+.|+++|+.-. ..+..-...+++|.+|||++
T Consensus 254 -----------ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD 322 (419)
T KOG2120|consen 254 -----------LLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSD 322 (419)
T ss_pred -----------HHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeecccc
Confidence 11234445555555555433211111 111 134556666554311 11111123567777777776
Q ss_pred Cc-cccCCchhhcCCCCCCEEECcCCcCcccCCC---CCCCCCCCcEEEccCccCc
Q 010041 327 NQ-LHSSIPLVIGNFSALSYLDLSDNRICGIIPD---ELTKLSHLKYLNLSSNLLS 378 (519)
Q Consensus 327 n~-l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---~~~~l~~L~~L~l~~n~l~ 378 (519)
|. ++......+..++.|++|.++.|.. .+|+ .+...+.|.+|++.++--.
T Consensus 323 ~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~vsd 376 (419)
T KOG2120|consen 323 SVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGCVSD 376 (419)
T ss_pred ccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEeccccCc
Confidence 54 3333334556677788887777743 2333 3556677888887766433
No 51
>PHA02988 hypothetical protein; Provisional
Probab=98.23 E-value=3.7e-07 Score=87.22 Aligned_cols=76 Identities=32% Similarity=0.392 Sum_probs=49.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|+..... ......++........+....+++. ++...|++.+|++||
T Consensus 198 ~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~l~---~li~~cl~~dp~~Rp 267 (283)
T PHA02988 198 EYTIKDDIYSLGVVLWEIFTGKIPFENLTT-------KEIYDLIINKNNSLKLPLDCPLEIK---CIVEACTSHDSIKRP 267 (283)
T ss_pred cccchhhhhHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcCCCCCCCCcCcHHHH---HHHHHHhcCCcccCc
Confidence 456799999999999999999999863210 0001111111111122222334444 889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
||+||+
T Consensus 268 s~~ell 273 (283)
T PHA02988 268 NIKEIL 273 (283)
T ss_pred CHHHHH
Confidence 999873
No 52
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.23 E-value=3.3e-07 Score=89.88 Aligned_cols=81 Identities=28% Similarity=0.460 Sum_probs=56.9
Q ss_pred eeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCC
Q 010041 428 KLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSS 507 (519)
Q Consensus 428 ~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~ 507 (519)
++......++|.||||||||+||++||..|+..+.+.+..-+.. ...+.-+++..+++-.. -+...||+.
T Consensus 281 EvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG-------sNsL~LpvPstcP~Gfk---lL~Kqcw~s 350 (904)
T KOG4721|consen 281 EVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG-------SNSLHLPVPSTCPDGFK---LLLKQCWNS 350 (904)
T ss_pred HHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc-------CCcccccCcccCchHHH---HHHHHHHhc
Confidence 33445567899999999999999999999998765543222222 12222334444445554 567899999
Q ss_pred CCCCCCCcccC
Q 010041 508 QPKSRPTMQRI 518 (519)
Q Consensus 508 ~p~~RP~m~~v 518 (519)
-|..||+++++
T Consensus 351 KpRNRPSFrqi 361 (904)
T KOG4721|consen 351 KPRNRPSFRQI 361 (904)
T ss_pred CCCCCccHHHH
Confidence 99999999875
No 53
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.21 E-value=5.2e-07 Score=81.70 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=49.6
Q ss_pred CCCCCEEECcCCcCcccC-CCCCCCCCCCcEEEccCccCccc-cchhhhcccCCCEEEccCCcccccccc------cccc
Q 010041 340 FSALSYLDLSDNRICGII-PDELTKLSHLKYLNLSSNLLSGQ-IPFAIGKLFNLASLDLSKNKLSGSIPT------EIGN 411 (519)
Q Consensus 340 ~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~------~l~~ 411 (519)
+|++..+.+..|.+...- .+....++.+..|+|+.+++..- --.++..++.|.-|.+++|.+.+.+.. -+++
T Consensus 198 Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaR 277 (418)
T KOG2982|consen 198 FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIAR 277 (418)
T ss_pred cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEee
Confidence 567777777777665322 23344556666777777776531 123456677777788888876654332 2457
Q ss_pred CCCCCEEEcc
Q 010041 412 CSELRNLTLN 421 (519)
Q Consensus 412 l~~L~~L~l~ 421 (519)
+++++.|+=+
T Consensus 278 L~~v~vLNGs 287 (418)
T KOG2982|consen 278 LTKVQVLNGS 287 (418)
T ss_pred ccceEEecCc
Confidence 7777776644
No 54
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.18 E-value=4.7e-07 Score=96.83 Aligned_cols=76 Identities=32% Similarity=0.567 Sum_probs=54.8
Q ss_pred ceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhh-hhccCCCCChhHHHHHHHHHHHHHHhcCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p 509 (519)
...+++|+|||||||++||++| |..|+.....+ .....++ +.++.+ +..+++.+. +|+..||+.+|
T Consensus 878 d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-------~v~~~~~~ggRL~~--P~~CP~~ly---~lM~~CW~~~p 945 (1025)
T KOG1095|consen 878 DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-------EVLLDVLEGGRLDP--PSYCPEKLY---QLMLQCWKHDP 945 (1025)
T ss_pred hcccccccchhhhHHHHHHHHhCCCCCCCCcchH-------HHHHHHHhCCccCC--CCCCChHHH---HHHHHHccCCh
Confidence 4568899999999999999986 99998743321 1112222 335544 344556665 89999999999
Q ss_pred CCCCCcccCC
Q 010041 510 KSRPTMQRIS 519 (519)
Q Consensus 510 ~~RP~m~~v~ 519 (519)
++||++.+++
T Consensus 946 e~RP~F~~i~ 955 (1025)
T KOG1095|consen 946 EDRPSFRTIV 955 (1025)
T ss_pred hhCccHHHHH
Confidence 9999998764
No 55
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.14 E-value=1.9e-07 Score=87.99 Aligned_cols=79 Identities=33% Similarity=0.520 Sum_probs=48.0
Q ss_pred eecceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCC
Q 010041 429 LAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSS 507 (519)
Q Consensus 429 ~~~~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~ 507 (519)
.......+.+.||||||++++|+++ |+.|..... .....+.+......+.+.....++. +++..||+.
T Consensus 176 ~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~C~~~ 244 (259)
T PF07714_consen 176 VLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD--------NEEIIEKLKQGQRLPIPDNCPKDIY---SLIQQCWSH 244 (259)
T ss_dssp HHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC--------HHHHHHHHHTTEETTSBTTSBHHHH---HHHHHHT-S
T ss_pred ccccccccccccccccccccccccccccccccccc--------cccccccccccccceeccchhHHHH---HHHHHHcCC
Confidence 3334447889999999999999999 778865321 1111122211111122222334444 889999999
Q ss_pred CCCCCCCcccC
Q 010041 508 QPKSRPTMQRI 518 (519)
Q Consensus 508 ~p~~RP~m~~v 518 (519)
+|++||+|+|+
T Consensus 245 ~p~~RPs~~~i 255 (259)
T PF07714_consen 245 DPEKRPSFQEI 255 (259)
T ss_dssp SGGGS--HHHH
T ss_pred ChhhCcCHHHH
Confidence 99999999986
No 56
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.11 E-value=6.9e-07 Score=79.87 Aligned_cols=86 Identities=26% Similarity=0.388 Sum_probs=55.3
Q ss_pred CCCCCcEEECCCCccccc----cchhhcCCCCCCEEEcccCcCCc----cCCc-------cccCCCCCCEEEccCCCCCc
Q 010041 99 CFPNLQYLDLGSNNLSGS----IPSQIDSLSNLTYIYLYENNLTG----TIPK-------EIGSLRNLEVLDLGSNNLNG 163 (519)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~L~~n~~~~----~~p~-------~~~~l~~L~~L~L~~n~l~~ 163 (519)
.+..++.++||+|.|... +...+.+-++|+..++++- ++| .+++ .+-+||+|+..+||.|.|..
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~ 106 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA-FTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGS 106 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhh-hhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCc
Confidence 367788888888888643 3334555677777777664 222 2222 24467888888888887765
Q ss_pred cCCcc----ccCCCCCCEEEccCCcC
Q 010041 164 TIPIE----IGSVRNLETLSLDGNKL 185 (519)
Q Consensus 164 ~~p~~----l~~l~~L~~L~L~~n~l 185 (519)
..|.. ++.-+.|.+|.+++|.+
T Consensus 107 ~~~e~L~d~is~~t~l~HL~l~NnGl 132 (388)
T COG5238 107 EFPEELGDLISSSTDLVHLKLNNNGL 132 (388)
T ss_pred ccchHHHHHHhcCCCceeEEeecCCC
Confidence 55543 34556777777777765
No 57
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.09 E-value=1.4e-06 Score=76.74 Aligned_cols=81 Identities=23% Similarity=0.245 Sum_probs=49.2
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC--C--CChhHHHHHHHHHHHHHHhcCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP--P--VNQKIVQDIILVSTIAFACLSS 507 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~--~--~~~~~~~~~~~~~~la~~C~~~ 507 (519)
....+.++||||||++++|+++|+.|....... .......+...... . .......+...+.++..+|++.
T Consensus 78 ~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~ 151 (176)
T smart00750 78 GQSYTEKADIYSLGITLYEALDYELPYNEEREL------SAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASR 151 (176)
T ss_pred CCCCcchhhHHHHHHHHHHHHhCCCCccccchh------cHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhc
Confidence 344567899999999999999999997532111 01111111111110 0 0111111212356899999999
Q ss_pred CCCCCCCcccC
Q 010041 508 QPKSRPTMQRI 518 (519)
Q Consensus 508 ~p~~RP~m~~v 518 (519)
+|++||++.|+
T Consensus 152 ~p~~Rp~~~~l 162 (176)
T smart00750 152 LPQRREAANHY 162 (176)
T ss_pred ccccccCHHHH
Confidence 99999999886
No 58
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.08 E-value=7.7e-08 Score=96.87 Aligned_cols=126 Identities=31% Similarity=0.349 Sum_probs=97.9
Q ss_pred CCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCc-cccCCCCCCEEEc
Q 010041 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPI-EIGSVRNLETLSL 180 (519)
Q Consensus 102 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L 180 (519)
.|...+++.|.+. .+..++.-++.|+.|+|++|++... +.+..|++|++|||++|.+. .+|. ....+. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4666777777775 4556788889999999999999855 37889999999999999987 3442 233444 999999
Q ss_pred cCCcCcccCchhccCCCCCCEEeccCCcCCCCCC-cccCCcCccCeeeCCCCcCC
Q 010041 181 DGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIP-KEIGSLRNLKELDLSSNKLG 234 (519)
Q Consensus 181 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~ 234 (519)
++|.++.. ..+.++.+|+.||+++|-+.+.-- .-+..+..|+.|.|.+|.+.
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99998743 467899999999999998875421 23466788999999999875
No 59
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=98.07 E-value=9.5e-07 Score=89.97 Aligned_cols=77 Identities=22% Similarity=0.390 Sum_probs=56.9
Q ss_pred ceeccccccccchhhhhcccc-cCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEIL-MGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l-~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..+++..+||||||+++||.. .|..|++.+. +..+...+++..+-+.+.+++..+. +||+.||+.+..
T Consensus 808 ~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--------NQdVIkaIe~gyRLPpPmDCP~aL~---qLMldCWqkdR~ 876 (996)
T KOG0196|consen 808 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--------NQDVIKAIEQGYRLPPPMDCPAALY---QLMLDCWQKDRN 876 (996)
T ss_pred hcccCchhhccccceEEEEecccCCCcccccc--------hHHHHHHHHhccCCCCCCCCcHHHH---HHHHHHHHHHhh
Confidence 356788999999999999987 5999987432 2233344544444444555555544 999999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||.+.|+|
T Consensus 877 ~RP~F~qiV 885 (996)
T KOG0196|consen 877 RRPKFAQIV 885 (996)
T ss_pred cCCCHHHHH
Confidence 999999875
No 60
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.06 E-value=3.7e-07 Score=81.60 Aligned_cols=245 Identities=24% Similarity=0.296 Sum_probs=118.6
Q ss_pred CCCCCCEEEccCCcCcccCch----hccCCCCCCEEeccCCcCC---CCCC-------cccCCcCccCeeeCCCCcCCCc
Q 010041 171 SVRNLETLSLDGNKLSGTIPI----EIESLRNLQWLDLSSNKLS---GTIP-------KEIGSLRNLKELDLSSNKLGGV 236 (519)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~~p~----~l~~l~~L~~L~l~~n~l~---~~~p-------~~l~~l~~L~~L~l~~n~l~~~ 236 (519)
.+..+..++||+|.|...-.. .+.+-.+|+..+++.-... ..++ +.+..|++|+.++++.|.+...
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~ 107 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE 107 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcc
Confidence 356677778888777543222 2344566666666543211 1112 1234566666666666666554
Q ss_pred CChh----hccCCCCceeecccccccCcCcccccCCCCcceeeccCccCcccCChhccCCCCCCEEeccCCcccccC---
Q 010041 237 LPQE----IENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHI--- 309 (519)
Q Consensus 237 ~p~~----l~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~--- 309 (519)
.|.. +...+.|.+|.+++|.+...--..++. .|. ++..| .....-+.|+.+....|++..-.
T Consensus 108 ~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~--~la~n-------KKaa~kp~Le~vicgrNRlengs~~~ 176 (388)
T COG5238 108 FPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALF--HLAYN-------KKAADKPKLEVVICGRNRLENGSKEL 176 (388)
T ss_pred cchHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHH--HHHHH-------hhhccCCCceEEEeccchhccCcHHH
Confidence 4432 234455566666555443111000100 000 00000 11123345666666666554211
Q ss_pred -CCCCCCCCCCcEEeCcCCccccCCc-----hhhcCCCCCCEEECcCCcCccc----CCCCCCCCCCCcEEEccCccCcc
Q 010041 310 -PSTLGRLTSLQILDLSSNQLHSSIP-----LVIGNFSALSYLDLSDNRICGI----IPDELTKLSHLKYLNLSSNLLSG 379 (519)
Q Consensus 310 -~~~l~~l~~L~~L~l~~n~l~~~~~-----~~~~~~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~ 379 (519)
...+..-..|+.+.+..|.+....- ..+..+++|+.|++.+|-++-. +...++..+.|+.|.+..|-++.
T Consensus 177 ~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~ 256 (388)
T COG5238 177 SAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSN 256 (388)
T ss_pred HHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhcc
Confidence 1112222456666666666542211 1234567777777777766532 22334445567777777777664
Q ss_pred ccchhh------hcccCCCEEEccCCcccccccccc-------ccCCCCCEEEccCCcce
Q 010041 380 QIPFAI------GKLFNLASLDLSKNKLSGSIPTEI-------GNCSELRNLTLNHNSLN 426 (519)
Q Consensus 380 ~~~~~~------~~~~~L~~L~l~~n~l~~~~~~~l-------~~l~~L~~L~l~~n~l~ 426 (519)
.-..++ ...++|..|...+|...+.+-..+ ..++.|..+.+.+|.+.
T Consensus 257 ~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 257 EGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred ccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 432222 124567777777776544322111 13445555556666554
No 61
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.04 E-value=2.5e-06 Score=85.98 Aligned_cols=77 Identities=25% Similarity=0.395 Sum_probs=58.1
Q ss_pred cceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCC
Q 010041 431 HTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 431 ~~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p 509 (519)
...+++.++|||.|||.+||++| |+.|.-- -....+.+.+|.+-+-+.++.+.+++. +++..||...|
T Consensus 288 rh~kFShaSDvWmyGVTiWEMFtyGEePW~G--------~~g~qIL~~iD~~erLpRPk~csedIY---~imk~cWah~p 356 (1039)
T KOG0199|consen 288 RHRKFSHASDVWMYGVTIWEMFTYGEEPWVG--------CRGIQILKNIDAGERLPRPKYCSEDIY---QIMKNCWAHNP 356 (1039)
T ss_pred ccccccccchhhhhhhhHHhhhccCCCCCCC--------CCHHHHHHhccccccCCCCCCChHHHH---HHHHHhccCCc
Confidence 34567789999999999999996 6666431 123345566665555555667777777 88999999999
Q ss_pred CCCCCcccC
Q 010041 510 KSRPTMQRI 518 (519)
Q Consensus 510 ~~RP~m~~v 518 (519)
.+||++..+
T Consensus 357 aDRptFsai 365 (1039)
T KOG0199|consen 357 ADRPTFSAI 365 (1039)
T ss_pred cccccHHHH
Confidence 999999876
No 62
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.99 E-value=3.6e-07 Score=73.16 Aligned_cols=85 Identities=28% Similarity=0.397 Sum_probs=40.1
Q ss_pred CCCCCCEEEcccCcCCccCCcccc-CCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCE
Q 010041 123 SLSNLTYIYLYENNLTGTIPKEIG-SLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQW 201 (519)
Q Consensus 123 ~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 201 (519)
+...|+..+|++|.+. .+|..|. ..+.++.|++++|.++ .+|.++..++.|+.|+++.|.+. ..|..+..+.+|..
T Consensus 51 ~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~ 127 (177)
T KOG4579|consen 51 KGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDM 127 (177)
T ss_pred CCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHH
Confidence 3344444555555554 3333332 3334555555555554 34444555555555555555544 33334444444444
Q ss_pred EeccCCcCC
Q 010041 202 LDLSSNKLS 210 (519)
Q Consensus 202 L~l~~n~l~ 210 (519)
|+..+|...
T Consensus 128 Lds~~na~~ 136 (177)
T KOG4579|consen 128 LDSPENARA 136 (177)
T ss_pred hcCCCCccc
Confidence 554444443
No 63
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.99 E-value=2e-06 Score=82.14 Aligned_cols=76 Identities=26% Similarity=0.438 Sum_probs=50.0
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|..... .....+.+........+.....++. ++..+|++.+|++
T Consensus 201 ~~~~~~sDv~slG~il~el~~~g~~p~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~~---~l~~~c~~~~p~~ 269 (283)
T cd05048 201 GKFTTESDIWSFGVVLWEIFSYGLQPYYGFS--------NQEVIEMIRSRQLLPCPEDCPARVY---ALMIECWNEIPAR 269 (283)
T ss_pred CcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHcCCcCCCcccCCHHHH---HHHHHHccCChhh
Confidence 345678999999999999997 988865211 0112222222222222223334544 8899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|+||.
T Consensus 270 Rp~~~~i~ 277 (283)
T cd05048 270 RPRFKDIH 277 (283)
T ss_pred CcCHHHHH
Confidence 99999873
No 64
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=97.99 E-value=1.8e-06 Score=81.08 Aligned_cols=73 Identities=26% Similarity=0.536 Sum_probs=51.7
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhh-h-hccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL-D-QRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~-d-~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..++..||||||+++||+.| |+.|+..+..+... ..+ | -|+..+ ..+++|+. .++.-||+..|+
T Consensus 474 ~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~--------~ylkdGyRlaQP--~NCPDeLf---~vMacCWallpe 540 (563)
T KOG1024|consen 474 HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME--------HYLKDGYRLAQP--FNCPDELF---TVMACCWALLPE 540 (563)
T ss_pred hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH--------HHHhccceecCC--CCCcHHHH---HHHHHHHhcCcc
Confidence 46678999999999999875 99998654433211 111 1 233333 34556655 889999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||+++|+|
T Consensus 541 eRPsf~Qlv 549 (563)
T KOG1024|consen 541 ERPSFSQLV 549 (563)
T ss_pred cCCCHHHHH
Confidence 999999874
No 65
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.99 E-value=2.3e-06 Score=81.71 Aligned_cols=82 Identities=23% Similarity=0.369 Sum_probs=50.3
Q ss_pred eccccccccchhhhhcccccCCCCccccccc-c------cCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSL-S------SSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLS 506 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~-~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~ 506 (519)
..+.++|+||||++++|+++|+.|....... . ..........+.++.....+.+.....+ +.++...|++
T Consensus 186 ~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~ 262 (283)
T cd05080 186 KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQE---VYILMKNCWE 262 (283)
T ss_pred CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHH---HHHHHHHHhc
Confidence 4567899999999999999999996532110 0 0000111112222222222222222334 4489999999
Q ss_pred CCCCCCCCcccC
Q 010041 507 SQPKSRPTMQRI 518 (519)
Q Consensus 507 ~~p~~RP~m~~v 518 (519)
.+|++||+|++|
T Consensus 263 ~~p~~Rps~~~i 274 (283)
T cd05080 263 TEAKFRPTFRSL 274 (283)
T ss_pred cChhhCCCHHHH
Confidence 999999999986
No 66
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.96 E-value=2.8e-06 Score=84.42 Aligned_cols=74 Identities=23% Similarity=0.365 Sum_probs=48.7
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.++.|.|||+||+++||+.| |.-|+.-+.-- .+-+.+....+-..+..+++.+. +++.+||+.+|.+|
T Consensus 442 tFSiKSDVWAFGVLLWEIATYGMsPYPGidlS--------qVY~LLEkgyRM~~PeGCPpkVY---eLMraCW~WsPsDR 510 (1157)
T KOG4278|consen 442 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYGLLEKGYRMDGPEGCPPKVY---ELMRACWNWSPSDR 510 (1157)
T ss_pred ccccchhhHHHHHHHHHHHhcCCCCCCCccHH--------HHHHHHhccccccCCCCCCHHHH---HHHHHHhcCCcccC
Confidence 46689999999999999986 77777532210 11122222221112333445554 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.|+
T Consensus 511 PsFaei 516 (1157)
T KOG4278|consen 511 PSFAEI 516 (1157)
T ss_pred ccHHHH
Confidence 999875
No 67
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.94 E-value=2.2e-06 Score=80.52 Aligned_cols=75 Identities=19% Similarity=0.325 Sum_probs=50.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|..... .....+.+......+.+....+++. ++..+|++.+|++|
T Consensus 174 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~l~---~li~~~~~~~p~~R 242 (257)
T cd05116 174 KFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--------GNEVTQMIESGERMECPQRCPPEMY---DLMKLCWTYGVDER 242 (257)
T ss_pred CcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHCCCCCCCCCCCCHHHH---HHHHHHhccCchhC
Confidence 34568999999999999997 999875321 1112222333222223333344555 88999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.+|+
T Consensus 243 p~~~~i~ 249 (257)
T cd05116 243 PGFAVVE 249 (257)
T ss_pred cCHHHHH
Confidence 9999873
No 68
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.94 E-value=3.1e-06 Score=79.69 Aligned_cols=75 Identities=27% Similarity=0.492 Sum_probs=48.2
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|..... .......++.....+.+....++ +.+++.+|++.+|++
T Consensus 179 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~P~~ 247 (261)
T cd05068 179 NRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--------NAEVLQQVDQGYRMPCPPGCPKE---LYDIMLDCWKEDPDD 247 (261)
T ss_pred CCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCCCCCCCcCCHH---HHHHHHHHhhcCccc
Confidence 345678999999999999998 888864211 11111122222111112222233 348899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|+++
T Consensus 248 Rp~~~~l 254 (261)
T cd05068 248 RPTFETL 254 (261)
T ss_pred CCCHHHH
Confidence 9999986
No 69
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.93 E-value=3.4e-06 Score=83.85 Aligned_cols=85 Identities=26% Similarity=0.440 Sum_probs=56.3
Q ss_pred ceeeeecceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHH
Q 010041 425 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 503 (519)
Q Consensus 425 l~~~~~~~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~ 503 (519)
++++...+...+.++|||+||++++|+.+ |..|+...... .....++-...+.+.+...+.++. .+...
T Consensus 329 LAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-------~v~~kI~~~~~r~~~~~~~p~~~~---~~~~~ 398 (474)
T KOG0194|consen 329 LAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-------EVKAKIVKNGYRMPIPSKTPKELA---KVMKQ 398 (474)
T ss_pred cChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-------HHHHHHHhcCccCCCCCCCHHHHH---HHHHH
Confidence 44555555678899999999999999997 88887643211 011122222333333334455555 56679
Q ss_pred hcCCCCCCCCCcccCC
Q 010041 504 CLSSQPKSRPTMQRIS 519 (519)
Q Consensus 504 C~~~~p~~RP~m~~v~ 519 (519)
|+..+|++||+|.+|+
T Consensus 399 c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 399 CWKKDPEDRPTMSTIK 414 (474)
T ss_pred hccCChhhccCHHHHH
Confidence 9999999999999873
No 70
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.92 E-value=3.3e-06 Score=79.32 Aligned_cols=75 Identities=24% Similarity=0.456 Sum_probs=47.0
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|...... ....+.+........+.....+ +..++.+|++.+|++|
T Consensus 177 ~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~---~~~li~~c~~~~p~~R 245 (256)
T cd05114 177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--------YEVVEMISRGFRLYRPKLASMT---VYEVMYSCWHEKPEGR 245 (256)
T ss_pred ccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCCCCCCCCCCHH---HHHHHHHHccCCcccC
Confidence 45578999999999999999 8888653211 1111111111111111111223 4589999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.|++
T Consensus 246 ps~~~l~ 252 (256)
T cd05114 246 PTFAELL 252 (256)
T ss_pred cCHHHHH
Confidence 9999873
No 71
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.90 E-value=3.7e-06 Score=82.60 Aligned_cols=77 Identities=29% Similarity=0.433 Sum_probs=48.2
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|...... .......+........+....+++. .++.+|++.+|++
T Consensus 251 ~~~~~~sDiwslG~il~el~~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~---~li~~cl~~dp~~ 320 (338)
T cd05102 251 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-------NEEFCQRLKDGTRMRAPENATPEIY---RIMLACWQGDPKE 320 (338)
T ss_pred CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc-------cHHHHHHHhcCCCCCCCCCCCHHHH---HHHHHHccCChhh
Confidence 345678999999999999996 9998753210 0011111111111111122223444 8899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||+
T Consensus 321 RPs~~el~ 328 (338)
T cd05102 321 RPTFSALV 328 (338)
T ss_pred CcCHHHHH
Confidence 99999874
No 72
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.89 E-value=2.9e-06 Score=81.30 Aligned_cols=75 Identities=28% Similarity=0.500 Sum_probs=49.2
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|..... ...+.+.+........+....+++ .+++.+|++.+|++|
T Consensus 205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~cl~~~P~~R 273 (290)
T cd05045 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--------PERLFNLLKTGYRMERPENCSEEM---YNLMLTCWKQEPDKR 273 (290)
T ss_pred CcchHhHHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHhCCCCCCCCCCCCHHH---HHHHHHHccCCcccC
Confidence 45678999999999999998 888864211 111222222222222222223344 488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 274 p~~~~i~ 280 (290)
T cd05045 274 PTFADIS 280 (290)
T ss_pred CCHHHHH
Confidence 9999873
No 73
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.88 E-value=1.1e-06 Score=70.43 Aligned_cols=115 Identities=21% Similarity=0.235 Sum_probs=79.9
Q ss_pred CCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCE
Q 010041 98 SCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLET 177 (519)
Q Consensus 98 ~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 177 (519)
....+|+..+|++|.+....+..-.+.+.++.|++.+|.++ .+|..+..++.|+.|+++.|.+. ..|..+..+.+|..
T Consensus 50 ~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~ 127 (177)
T KOG4579|consen 50 SKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDM 127 (177)
T ss_pred hCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHH
Confidence 34456777888888887444444455668899999999998 67888999999999999999887 56667777888999
Q ss_pred EEccCCcCcccCchhccCCCCCCEEeccCCcCCCCCCc
Q 010041 178 LSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTIPK 215 (519)
Q Consensus 178 L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 215 (519)
|+..+|... .+|..+---+..-...+.++.+.+..+.
T Consensus 128 Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 128 LDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred hcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 998888775 5554432212222233455556555443
No 74
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.88 E-value=4.5e-06 Score=78.26 Aligned_cols=75 Identities=29% Similarity=0.444 Sum_probs=47.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|..... .......+.....++.......+ +.++..+|++.+|++||
T Consensus 177 ~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~l~~~p~~Rp 245 (256)
T cd08529 177 PYNEKSDVWALGVVLYECCTGKHPFDANN--------QGALILKIIRGVFPPVSQMYSQQ---LAQLIDQCLTKDYRQRP 245 (256)
T ss_pred CCCCccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCCCCccccCHH---HHHHHHHHccCCcccCc
Confidence 45678999999999999999999975221 00111111111111111112233 34889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|.|+.
T Consensus 246 ~~~~ll 251 (256)
T cd08529 246 DTFQLL 251 (256)
T ss_pred CHHHHh
Confidence 999863
No 75
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.87 E-value=3.8e-06 Score=79.23 Aligned_cols=75 Identities=23% Similarity=0.352 Sum_probs=48.0
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|...... ....+.+........+.....++. ++..+|++.+|++
T Consensus 180 ~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~cl~~~p~~ 248 (263)
T cd05052 180 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKGYRMERPEGCPPKVY---ELMRACWQWNPSD 248 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCCCCCCCCCCHHHH---HHHHHHccCCccc
Confidence 345678999999999999998 8888642110 011111222222222222234444 7899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|.|+
T Consensus 249 Rp~~~~l 255 (263)
T cd05052 249 RPSFAEI 255 (263)
T ss_pred CCCHHHH
Confidence 9999986
No 76
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.87 E-value=4.2e-06 Score=79.14 Aligned_cols=74 Identities=22% Similarity=0.412 Sum_probs=47.8
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ......+......+.......++ .+++..|++.+|++|
T Consensus 186 ~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~---~~li~~c~~~~p~~R 254 (268)
T cd05063 186 KFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGFRLPAPMDCPSAV---YQLMLQCWQQDRARR 254 (268)
T ss_pred CcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhcCCCCCCCCCCCHHH---HHHHHHHcCCCcccC
Confidence 45678999999999999987 9999752210 11111111111111112222333 489999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 255 p~~~~i 260 (268)
T cd05063 255 PRFVDI 260 (268)
T ss_pred cCHHHH
Confidence 999987
No 77
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.84 E-value=5.7e-06 Score=77.90 Aligned_cols=74 Identities=26% Similarity=0.449 Sum_probs=47.1
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|..... .......+......+......+++. +++.+|++.+|++|
T Consensus 180 ~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 248 (261)
T cd05072 180 SFTIKSDVWSFGILLYEIVTYGKIPYPGMS--------NSDVMSALQRGYRMPRMENCPDELY---DIMKTCWKEKAEER 248 (261)
T ss_pred CCChhhhhhhhHHHHHHHHccCCCCCCCCC--------HHHHHHHHHcCCCCCCCCCCCHHHH---HHHHHHccCCcccC
Confidence 34568999999999999998 998874211 0011111111111111122223443 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|+++
T Consensus 249 p~~~~i 254 (261)
T cd05072 249 PTFDYL 254 (261)
T ss_pred cCHHHH
Confidence 999986
No 78
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.84 E-value=6e-06 Score=79.24 Aligned_cols=76 Identities=28% Similarity=0.430 Sum_probs=48.1
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |..|..... .....+.+........+.....+ +.+++.+|+..+|++
T Consensus 209 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~ 277 (293)
T cd05053 209 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP--------VEELFKLLKEGYRMEKPQNCTQE---LYHLMRDCWHEVPSQ 277 (293)
T ss_pred CCcCcccceeehhhHHHHHhcCCCCCCCCCC--------HHHHHHHHHcCCcCCCCCCCCHH---HHHHHHHHcccCccc
Confidence 345678999999999999987 888864211 00111222222111112222233 448999999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||||.||+
T Consensus 278 Rps~~eil 285 (293)
T cd05053 278 RPTFKQLV 285 (293)
T ss_pred CcCHHHHH
Confidence 99999873
No 79
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.84 E-value=5.4e-06 Score=78.87 Aligned_cols=75 Identities=23% Similarity=0.471 Sum_probs=47.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|....... .....+.....+........+ +..+..+|++.+|++||
T Consensus 177 ~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~Rp 245 (277)
T cd06642 177 AYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLFLIPKNSPPTLEGQYSKP---FKEFVEACLNKDPRFRP 245 (277)
T ss_pred CCchhhhHHHHHHHHHHHHhCCCCCcccchh--------hHHhhhhcCCCCCCCcccCHH---HHHHHHHHccCCcccCc
Confidence 3567899999999999999999997532111 000111111111111112223 34889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|.||+
T Consensus 246 ~~~~il 251 (277)
T cd06642 246 TAKELL 251 (277)
T ss_pred CHHHHH
Confidence 999874
No 80
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.84 E-value=6e-06 Score=78.22 Aligned_cols=75 Identities=25% Similarity=0.476 Sum_probs=47.4
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |..|..... .....+.+........+....++ +.+++.+|++.+|++|
T Consensus 191 ~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~R 259 (273)
T cd05035 191 VYTSKSDVWAFGVTMWEIATRGQTPYPGVE--------NHEIYDYLRHGNRLKQPEDCLDE---LYDLMYSCWRADPKDR 259 (273)
T ss_pred CCCcccchHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCCCCCcCCCHH---HHHHHHHHcCCChhhC
Confidence 45678999999999999998 888764321 11111111111111112222233 3488899999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 260 p~~~e~~ 266 (273)
T cd05035 260 PTFTKLR 266 (273)
T ss_pred cCHHHHH
Confidence 9999873
No 81
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.83 E-value=5e-06 Score=79.10 Aligned_cols=76 Identities=25% Similarity=0.325 Sum_probs=49.0
Q ss_pred ceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
....+.++|+||||++++|+++ |+.|.+... .....+.+........+.....+ +.++..+|++.+|+
T Consensus 195 ~~~~~~~~DiwslG~il~el~~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~cl~~~p~ 263 (277)
T cd05036 195 DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT--------NQEVMEFVTGGGRLDPPKGCPGP---VYRIMTDCWQHTPE 263 (277)
T ss_pred cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHcCCcCCCCCCCCHH---HHHHHHHHcCCCcc
Confidence 3456789999999999999986 888865211 11112222221111112222233 34889999999999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+||++.||
T Consensus 264 ~Rps~~~v 271 (277)
T cd05036 264 DRPNFATI 271 (277)
T ss_pred cCcCHHHH
Confidence 99999987
No 82
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.83 E-value=5.2e-06 Score=79.61 Aligned_cols=75 Identities=28% Similarity=0.441 Sum_probs=47.2
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|...... ....+................+ +.++..+|++.+|++
T Consensus 200 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~P~~ 268 (291)
T cd05094 200 RKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--------TEVIECITQGRVLERPRVCPKE---VYDIMLGCWQREPQQ 268 (291)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhCCCCCCCCccCCHH---HHHHHHHHcccChhh
Confidence 345678999999999999998 9998642111 0011111111111111111233 348999999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|+||
T Consensus 269 Rpt~~~v 275 (291)
T cd05094 269 RLNIKEI 275 (291)
T ss_pred CcCHHHH
Confidence 9999987
No 83
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.83 E-value=4.5e-06 Score=78.99 Aligned_cols=76 Identities=18% Similarity=0.364 Sum_probs=47.3
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ........+....+.......+++ .+++.+|++.+|++||
T Consensus 189 ~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l---~~li~~cl~~~p~~Rp 258 (269)
T cd08528 189 PYGEKADVWAFGCILYQMCTLQPPFYSTNM-------LSLATKIVEAVYEPLPEGMYSEDV---TDVITSCLTPDAEARP 258 (269)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCcccccCH-------HHHHHHHhhccCCcCCcccCCHHH---HHHHHHHCCCCCccCC
Confidence 456789999999999999999999642110 000111111111111111112333 3788899999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|.||+
T Consensus 259 ~~~e~~ 264 (269)
T cd08528 259 DIIQVS 264 (269)
T ss_pred CHHHHH
Confidence 999874
No 84
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.81 E-value=6.2e-06 Score=80.88 Aligned_cols=78 Identities=24% Similarity=0.395 Sum_probs=49.2
Q ss_pred ceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
....+.+.|+||||++++|+++ |+.|..... ........+........+....++ +.+++.+|++.+|+
T Consensus 249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~cl~~~p~ 318 (337)
T cd05054 249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ-------IDEEFCRRLKEGTRMRAPEYATPE---IYSIMLDCWHNNPE 318 (337)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCCCCCCCC-------ccHHHHHHHhccCCCCCCccCCHH---HHHHHHHHccCChh
Confidence 3456779999999999999997 998875311 001111111111111112222233 34889999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||++.||+
T Consensus 319 ~RPs~~ell 327 (337)
T cd05054 319 DRPTFSELV 327 (337)
T ss_pred hCcCHHHHH
Confidence 999999873
No 85
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.81 E-value=6.9e-06 Score=86.63 Aligned_cols=77 Identities=27% Similarity=0.470 Sum_probs=53.8
Q ss_pred ceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
....+.|+||||||++++|+++ |..|+..+. +...+.+.+.++-+...+..+.+++. .++..||+.+|+
T Consensus 495 ~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-------~~~~l~~~l~~G~r~~~P~~c~~eiY---~iM~~CW~~~p~ 564 (609)
T KOG0200|consen 495 DRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-------PTEELLEFLKEGNRMEQPEHCSDEIY---DLMKSCWNADPE 564 (609)
T ss_pred cCcccccchhhHHHHHHHHHhhCCCCCCCCCC-------cHHHHHHHHhcCCCCCCCCCCCHHHH---HHHHHHhCCCcc
Confidence 3567889999999999999986 888876311 01112233333333333455566776 899999999999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+||++.|.
T Consensus 565 ~RP~F~~~ 572 (609)
T KOG0200|consen 565 DRPTFSEC 572 (609)
T ss_pred cCCCHHHH
Confidence 99999875
No 86
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.80 E-value=5.9e-06 Score=78.12 Aligned_cols=75 Identities=21% Similarity=0.411 Sum_probs=47.8
Q ss_pred eeccccccccchhhhhcccc-cCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEIL-MGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l-~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|++ +|+.|...... ....+.+......+.+......+. +++..|++.+|++
T Consensus 183 ~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~c~~~~p~~ 251 (266)
T cd05064 183 HHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--------QDVIKAVEDGFRLPAPRNCPNLLH---QLMLDCWQKERGE 251 (266)
T ss_pred CCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHHCCCCCCCCCCCCHHHH---HHHHHHcCCCchh
Confidence 34567899999999999976 59998753211 011111211111122222333444 7899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|.|+
T Consensus 252 RP~~~~i 258 (266)
T cd05064 252 RPRFSQI 258 (266)
T ss_pred CCCHHHH
Confidence 9999886
No 87
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.80 E-value=5.5e-06 Score=80.50 Aligned_cols=74 Identities=24% Similarity=0.447 Sum_probs=47.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|.+.... ......+......+.+.....+ +..++..|++.+|++|
T Consensus 187 ~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~p~~R 255 (316)
T cd05108 187 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGERLPQPPICTID---VYMIMVKCWMIDADSR 255 (316)
T ss_pred CCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHccCChhhC
Confidence 45678999999999999987 9998753210 0111122111111112222223 3488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 256 ps~~~l 261 (316)
T cd05108 256 PKFREL 261 (316)
T ss_pred cCHHHH
Confidence 999986
No 88
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.79 E-value=5.9e-06 Score=78.84 Aligned_cols=75 Identities=24% Similarity=0.407 Sum_probs=47.4
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |..|..... .....+.+......+.+....+++. .+...|++.+|++|
T Consensus 202 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~~---~li~~cl~~~p~~R 270 (283)
T cd05091 202 KFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--------NQDVIEMIRNRQVLPCPDDCPAWVY---TLMLECWNEFPSRR 270 (283)
T ss_pred CCCcchhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHcCCcCCCCCCCCHHHH---HHHHHHhCCCcccC
Confidence 35668999999999999998 777754211 0111111111111122222334444 88999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||.
T Consensus 271 P~~~~i~ 277 (283)
T cd05091 271 PRFKDIH 277 (283)
T ss_pred CCHHHHH
Confidence 9999873
No 89
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.79 E-value=6.6e-06 Score=76.89 Aligned_cols=76 Identities=18% Similarity=0.347 Sum_probs=47.8
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|....... .....+........+.....++ ..++.+|++.+|++
T Consensus 169 ~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~ 237 (250)
T cd05085 169 GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYRMSCPQKCPDDV---YKVMQRCWDYKPEN 237 (250)
T ss_pred CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCCCCCCCCCCHHH---HHHHHHHcccCccc
Confidence 445678999999999999998 88886422100 0111111111111111222333 48899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||+
T Consensus 238 Rp~~~~l~ 245 (250)
T cd05085 238 RPKFSELQ 245 (250)
T ss_pred CCCHHHHH
Confidence 99999863
No 90
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.79 E-value=8e-06 Score=77.83 Aligned_cols=74 Identities=22% Similarity=0.358 Sum_probs=46.9
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ....+.+......+.+.....++ ..+...|+..+|++|
T Consensus 187 ~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~c~~~~p~~R 255 (279)
T cd05111 187 RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--------HEVPDLLEKGERLAQPQICTIDV---YMVMVKCWMIDENVR 255 (279)
T ss_pred CcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCcCCCCCCCCHHH---HHHHHHHcCCCcccC
Confidence 45678999999999999998 9988753211 01112222111111111122233 377899999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.|+
T Consensus 256 ps~~el 261 (279)
T cd05111 256 PTFKEL 261 (279)
T ss_pred cCHHHH
Confidence 999986
No 91
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.78 E-value=7.1e-06 Score=77.05 Aligned_cols=74 Identities=26% Similarity=0.496 Sum_probs=47.4
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|...... ......+........+.....+ +.+++.+|++.+|++|
T Consensus 177 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~p~~R 245 (256)
T cd05059 177 RFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--------SEVVESVSAGYRLYRPKLAPTE---VYTIMYSCWHEKPEDR 245 (256)
T ss_pred CCCchhhHHHHHHHHHHHhccCCCCCCCCCH--------HHHHHHHHcCCcCCCCCCCCHH---HHHHHHHHhcCChhhC
Confidence 45568999999999999998 7888653211 1111111111111111112233 4489999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 246 pt~~~~ 251 (256)
T cd05059 246 PAFKKL 251 (256)
T ss_pred cCHHHH
Confidence 999987
No 92
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.78 E-value=2.5e-05 Score=50.56 Aligned_cols=10 Identities=60% Similarity=0.836 Sum_probs=3.5
Q ss_pred CCCCCEEEcc
Q 010041 148 LRNLEVLDLG 157 (519)
Q Consensus 148 l~~L~~L~L~ 157 (519)
|++|++|+++
T Consensus 23 l~~L~~L~l~ 32 (44)
T PF12799_consen 23 LPNLETLNLS 32 (44)
T ss_dssp CTTSSEEEET
T ss_pred CCCCCEEEec
Confidence 3333333333
No 93
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.77 E-value=6.6e-06 Score=77.29 Aligned_cols=75 Identities=27% Similarity=0.469 Sum_probs=48.0
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|+..... ......+......+.+.....++ .++..+|++.+|++
T Consensus 173 ~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l---~~li~~cl~~~p~~ 241 (257)
T cd05060 173 GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------AEVIAMLESGERLPRPEECPQEI---YSIMLSCWKYRPED 241 (257)
T ss_pred CCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCCcCCCCCCCCHHH---HHHHHHHhcCChhh
Confidence 345678999999999999998 9998753211 01111111111111122222333 48899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.||
T Consensus 242 Rp~~~~l 248 (257)
T cd05060 242 RPTFSEL 248 (257)
T ss_pred CcCHHHH
Confidence 9999986
No 94
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.76 E-value=8e-06 Score=76.62 Aligned_cols=76 Identities=21% Similarity=0.392 Sum_probs=48.3
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
...+.+.|+||||++++|+++|+.|..... ........+... .++.+.....++ ..+..+|++.+|++|
T Consensus 176 ~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~---~~li~~~l~~~p~~R 244 (256)
T cd08218 176 RPYNNKSDIWALGCVLYEMCTLKHAFEAGN-------MKNLVLKIIRGS-YPPVSSHYSYDL---RNLVSQLFKRNPRDR 244 (256)
T ss_pred CCCCCccchhHHHHHHHHHHcCCCCccCCC-------HHHHHHHHhcCC-CCCCcccCCHHH---HHHHHHHhhCChhhC
Confidence 345678999999999999999999975211 000011111111 111222222334 388999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 245 p~~~~vl 251 (256)
T cd08218 245 PSVNSIL 251 (256)
T ss_pred cCHHHHh
Confidence 9999874
No 95
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.76 E-value=9.9e-06 Score=76.89 Aligned_cols=75 Identities=23% Similarity=0.465 Sum_probs=48.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChh-HHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQK-IVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+|+||++++|+++|+.|....... .....+.....+..... ..+++. .+...|++.+|++|
T Consensus 174 ~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~l~~~p~~R 242 (274)
T cd06609 174 GYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFLIPKNNPPSLEGNKFSKPFK---DFVSLCLNKDPKER 242 (274)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHHhhhcCCCCCcccccCHHHH---HHHHHHhhCChhhC
Confidence 3668899999999999999999997532210 01111111111111111 223333 78899999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|+||+
T Consensus 243 pt~~~il 249 (274)
T cd06609 243 PSAKELL 249 (274)
T ss_pred cCHHHHh
Confidence 9999873
No 96
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.76 E-value=2.8e-05 Score=50.29 Aligned_cols=36 Identities=47% Similarity=0.737 Sum_probs=16.6
Q ss_pred CCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCc
Q 010041 150 NLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLS 186 (519)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (519)
+|++|++++|+++ .+|..++++++|++|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4455555555554 23333455555555555555544
No 97
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.76 E-value=1.1e-05 Score=76.31 Aligned_cols=74 Identities=24% Similarity=0.428 Sum_probs=47.0
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|..... .....+.+......+.+....+++ .+++.+|++.+|++|
T Consensus 184 ~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l---~~li~~cl~~~p~~R 252 (266)
T cd05033 184 KFTSASDVWSFGIVMWEVMSYGERPYWDMS--------NQDVIKAVEDGYRLPPPMDCPSAL---YQLMLDCWQKDRNER 252 (266)
T ss_pred CCccccchHHHHHHHHHHHccCCCCCCCCC--------HHHHHHHHHcCCCCCCCCCCCHHH---HHHHHHHcCCCcccC
Confidence 34678999999999999887 988864211 111111111111111112222333 488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 253 p~~~ei 258 (266)
T cd05033 253 PTFSQI 258 (266)
T ss_pred cCHHHH
Confidence 999987
No 98
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.76 E-value=8.1e-06 Score=77.81 Aligned_cols=74 Identities=27% Similarity=0.432 Sum_probs=47.3
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|...... ....+.+........+.....++. ++...|++.+|++|
T Consensus 200 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~cl~~~P~~R 268 (280)
T cd05092 200 KFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--------TEAIECITQGRELERPRTCPPEVY---AIMQGCWQREPQQR 268 (280)
T ss_pred CcCchhhHHHHHHHHHHHHcCCCCCCccCCH--------HHHHHHHHcCccCCCCCCCCHHHH---HHHHHHccCChhhC
Confidence 45678999999999999998 8888642211 111111211111111122223444 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.||
T Consensus 269 p~~~~l 274 (280)
T cd05092 269 MVIKDI 274 (280)
T ss_pred CCHHHH
Confidence 999987
No 99
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.75 E-value=1.1e-05 Score=75.77 Aligned_cols=76 Identities=20% Similarity=0.327 Sum_probs=48.2
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
...+.+.|+||||++++|+++|+.|...... . ...........+..+....+++ .++..+|++.+|++|
T Consensus 177 ~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 245 (257)
T cd08223 177 KPYNYKSDVWALGCCVYEMATLKHAFNAKDM-------N-SLVYRIIEGKLPPMPKDYSPEL---GELIATMLSKRPEKR 245 (257)
T ss_pred CCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------H-HHHHHHHhcCCCCCccccCHHH---HHHHHHHhccCcccC
Confidence 3456789999999999999999998652110 0 0001111111111222222333 488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.|+.
T Consensus 246 p~~~~~l 252 (257)
T cd08223 246 PSVKSIL 252 (257)
T ss_pred CCHHHHh
Confidence 9999873
No 100
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.75 E-value=8.3e-06 Score=76.65 Aligned_cols=74 Identities=15% Similarity=0.350 Sum_probs=49.3
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|...... ......+........+....+++. .+...|+..+|++|
T Consensus 174 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~---~li~~c~~~~~~~R 242 (257)
T cd05115 174 KFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--------PEVMSFIEQGKRLDCPAECPPEMY---ALMKDCWIYKWEDR 242 (257)
T ss_pred CCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHHCCCCCCCCCCCCHHHH---HHHHHHcCCChhhC
Confidence 45678999999999999986 9999753211 111122222222222233334555 78999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.+|
T Consensus 243 p~~~~i 248 (257)
T cd05115 243 PNFAKV 248 (257)
T ss_pred cCHHHH
Confidence 999886
No 101
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.74 E-value=9e-06 Score=78.23 Aligned_cols=75 Identities=29% Similarity=0.423 Sum_probs=48.1
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ....+.+........+.....++. +++..|++.+|.+|
T Consensus 194 ~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 262 (297)
T cd05089 194 VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--------AELYEKLPQGYRMEKPRNCDDEVY---ELMRQCWRDRPYER 262 (297)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhcCCCCCCCCCCCHHHH---HHHHHHcCCChhhC
Confidence 45678999999999999997 9888642110 011112222222112222223443 88999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 263 p~~~~i~ 269 (297)
T cd05089 263 PPFAQIS 269 (297)
T ss_pred cCHHHHH
Confidence 9999873
No 102
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.74 E-value=8e-06 Score=77.82 Aligned_cols=75 Identities=19% Similarity=0.395 Sum_probs=48.0
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|....... .....+.............+++ .+++.+|++.+|++|
T Consensus 195 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 263 (280)
T cd05043 195 EYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--------EMAAYLKDGYRLAQPINCPDEL---FAVMACCWALDPEER 263 (280)
T ss_pred CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHcCCCCCCCCcCCHHH---HHHHHHHcCCChhhC
Confidence 45678999999999999998 99987532111 1111111111111111122344 488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.||+
T Consensus 264 ps~~~~~ 270 (280)
T cd05043 264 PSFSQLV 270 (280)
T ss_pred CCHHHHH
Confidence 9999873
No 103
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.73 E-value=1.3e-05 Score=76.35 Aligned_cols=75 Identities=21% Similarity=0.466 Sum_probs=48.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|....... .....+.....+........+ +.++...|++.+|++||
T Consensus 177 ~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~Rp 245 (277)
T cd06640 177 AYDSKADIWSLGITAIELAKGEPPNSDMHPM--------RVLFLIPKNNPPTLTGEFSKP---FKEFIDACLNKDPSFRP 245 (277)
T ss_pred CCccHHHHHHHHHHHHHHHHCCCCCCCcChH--------hHhhhhhcCCCCCCchhhhHH---HHHHHHHHcccCcccCc
Confidence 4567899999999999999999997532111 000111111112222222233 44889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|.||.
T Consensus 246 ~~~~il 251 (277)
T cd06640 246 TAKELL 251 (277)
T ss_pred CHHHHH
Confidence 999873
No 104
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.73 E-value=1.1e-05 Score=75.81 Aligned_cols=74 Identities=27% Similarity=0.482 Sum_probs=47.6
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|..... .......+......+.+....+++ .+++.+|++.+|++|
T Consensus 179 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 247 (260)
T cd05067 179 TFTIKSDVWSFGILLTEIVTYGRIPYPGMT--------NPEVIQNLERGYRMPRPDNCPEEL---YELMRLCWKEKPEER 247 (260)
T ss_pred CcCcccchHHHHHHHHHHHhCCCCCCCCCC--------hHHHHHHHHcCCCCCCCCCCCHHH---HHHHHHHccCChhhC
Confidence 34568999999999999998 999875211 111111122222222222222344 488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+++++
T Consensus 248 p~~~~l 253 (260)
T cd05067 248 PTFEYL 253 (260)
T ss_pred CCHHHH
Confidence 999876
No 105
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.73 E-value=1.1e-05 Score=75.96 Aligned_cols=75 Identities=16% Similarity=0.295 Sum_probs=49.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+|+||++++++++|+.|..... .....+.+.....+..+.....++ ..+..+|++.+|++||
T Consensus 186 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~l~~~p~~Rp 254 (265)
T cd08217 186 SYDEKSDIWSLGCLIYELCALSPPFTARN--------QLQLASKIKEGKFRRIPYRYSSEL---NEVIKSMLNVDPDKRP 254 (265)
T ss_pred CCCchhHHHHHHHHHHHHHHCCCcccCcC--------HHHHHHHHhcCCCCCCccccCHHH---HHHHHHHccCCcccCC
Confidence 35678999999999999999999976321 011112222121112222222333 4889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|.||+
T Consensus 255 ~~~~il 260 (265)
T cd08217 255 STEELL 260 (265)
T ss_pred CHHHHh
Confidence 999874
No 106
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.72 E-value=1e-05 Score=76.10 Aligned_cols=75 Identities=24% Similarity=0.451 Sum_probs=48.2
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|..... .....+.+......+.+.....+ +.++..+|++.+|++
T Consensus 178 ~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~ 246 (260)
T cd05070 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMN--------NREVLEQVERGYRMPCPQDCPIS---LHELMLQCWKKDPEE 246 (260)
T ss_pred CCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCCCCCCCcCCHH---HHHHHHHHcccCccc
Confidence 345678999999999999999 888864211 11111222222122222222233 448999999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||||.++
T Consensus 247 Rpt~~~l 253 (260)
T cd05070 247 RPTFEYL 253 (260)
T ss_pred CcCHHHH
Confidence 9999876
No 107
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.72 E-value=1.3e-05 Score=75.91 Aligned_cols=75 Identities=28% Similarity=0.445 Sum_probs=47.9
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|...... ......++.......+....+++. ++..+|++.+|++
T Consensus 188 ~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~ 256 (269)
T cd05044 188 GKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--------QEVLQHVTAGGRLQKPENCPDKIY---QLMTNCWAQDPSE 256 (269)
T ss_pred CCcccchhHHHHHHHHHHHHHcCCCCCcccCH--------HHHHHHHhcCCccCCcccchHHHH---HHHHHHcCCCccc
Confidence 345678999999999999998 9988642111 111111111111111222234444 8899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|.+|
T Consensus 257 Rp~~~~i 263 (269)
T cd05044 257 RPTFDRI 263 (269)
T ss_pred CCCHHHH
Confidence 9999986
No 108
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.72 E-value=1.2e-05 Score=76.66 Aligned_cols=75 Identities=28% Similarity=0.414 Sum_probs=47.9
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|...... ....+.+........+.....++ .++...|++.+|++
T Consensus 199 ~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~ 267 (280)
T cd05049 199 RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN--------EEVIECITQGRLLQRPRTCPSEV---YDIMLGCWKRDPQQ 267 (280)
T ss_pred CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCcCCCCCCCCHHH---HHHHHHHcCCCccc
Confidence 445678999999999999998 9998642111 01111111111111111222333 48899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.||
T Consensus 268 Rp~~~ei 274 (280)
T cd05049 268 RINIKDI 274 (280)
T ss_pred CCCHHHH
Confidence 9999987
No 109
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.72 E-value=8.7e-06 Score=76.48 Aligned_cols=75 Identities=25% Similarity=0.442 Sum_probs=47.3
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ....+.+........+....++ +.++..+|++.+|++|
T Consensus 177 ~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~p~~R 245 (256)
T cd05113 177 KFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--------SETVEKVSQGLRLYRPHLASEK---VYAIMYSCWHEKAEER 245 (256)
T ss_pred cccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHhcCCCCCCCCCCCHH---HHHHHHHHcCCCcccC
Confidence 45678999999999999998 8888653211 0111111111111111111233 3488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.+++
T Consensus 246 p~~~~ll 252 (256)
T cd05113 246 PTFQQLL 252 (256)
T ss_pred CCHHHHH
Confidence 9998863
No 110
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.72 E-value=1.2e-05 Score=76.73 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=49.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccc-c---CCCCCc---chhhhhhhccCCCCChhHHHHHHHHHHHHHHhcC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLS-S---SSGPKI---MLINVLDQRLSPPVNQKIVQDIILVSTIAFACLS 506 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~-~---~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~ 506 (519)
..+.+.|+||||++++|+++|+.|........ . ...... ...+.+......+.+....+ .+.+++.+|++
T Consensus 188 ~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~li~~cl~ 264 (284)
T cd05038 188 KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPD---EVYDLMKLCWE 264 (284)
T ss_pred CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCH---HHHHHHHHHhc
Confidence 45668999999999999999998864311100 0 000000 11122222222222222223 34589999999
Q ss_pred CCCCCCCCcccCC
Q 010041 507 SQPKSRPTMQRIS 519 (519)
Q Consensus 507 ~~p~~RP~m~~v~ 519 (519)
.+|++||+|.||+
T Consensus 265 ~~p~~Rpt~~ei~ 277 (284)
T cd05038 265 AEPQDRPSFADLI 277 (284)
T ss_pred cChhhCCCHHHHH
Confidence 9999999999873
No 111
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.71 E-value=9.9e-06 Score=75.81 Aligned_cols=74 Identities=22% Similarity=0.383 Sum_probs=48.0
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |..|...... ......+......+.+....+++ .++..+|++.+|++|
T Consensus 172 ~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 240 (252)
T cd05084 172 RYSSESDVWSFGILLWEAFSLGAVPYANLSN--------QQTREAIEQGVRLPCPELCPDAV---YRLMERCWEYDPGQR 240 (252)
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCccccCH--------HHHHHHHHcCCCCCCcccCCHHH---HHHHHHHcCCChhhC
Confidence 45678999999999999997 8888753211 01112222222222222222333 488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 241 ps~~~~ 246 (252)
T cd05084 241 PSFSTV 246 (252)
T ss_pred cCHHHH
Confidence 999986
No 112
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.70 E-value=1.5e-05 Score=75.97 Aligned_cols=81 Identities=22% Similarity=0.418 Sum_probs=48.0
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC-ChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV-NQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++|+.|............+ ............+.. .....+++ .++..+|++.+|++|
T Consensus 169 ~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~P~~R 244 (279)
T cd06619 169 QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP-LQLLQCIVDEDPPVLPVGQFSEKF---VHFITQCMRKQPKER 244 (279)
T ss_pred CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch-HHHHHHHhccCCCCCCCCcCCHHH---HHHHHHHhhCChhhC
Confidence 4567899999999999999999997643211100000 011111111111111 11112333 378889999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+++||
T Consensus 245 p~~~ei 250 (279)
T cd06619 245 PAPENL 250 (279)
T ss_pred CCHHHH
Confidence 999986
No 113
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.70 E-value=1.1e-05 Score=80.50 Aligned_cols=76 Identities=22% Similarity=0.388 Sum_probs=47.6
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |..|...... .......+........+.....++. +++.+|++.+|++|
T Consensus 292 ~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~---~li~~cl~~dP~~R 361 (375)
T cd05104 292 VYTFESDVWSYGILLWEIFSLGSSPYPGMPV-------DSKFYKMIKEGYRMLSPECAPSEMY---DIMKSCWDADPLKR 361 (375)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-------hHHHHHHHHhCccCCCCCCCCHHHH---HHHHHHccCChhHC
Confidence 45678999999999999997 7877643210 0111122222211111111223444 88999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 362 Ps~~eil 368 (375)
T cd05104 362 PTFKQIV 368 (375)
T ss_pred cCHHHHH
Confidence 9999873
No 114
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.69 E-value=1e-05 Score=80.51 Aligned_cols=76 Identities=25% Similarity=0.412 Sum_probs=48.8
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ................+.....++. ++...|++.+|++|
T Consensus 290 ~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~---~li~~cl~~dp~~R 359 (374)
T cd05106 290 VYTVQSDVWSYGILLWEIFSLGKSPYPGILV-------NSKFYKMVKRGYQMSRPDFAPPEIY---SIMKMCWNLEPTER 359 (374)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCccccc-------cHHHHHHHHcccCccCCCCCCHHHH---HHHHHHcCCChhhC
Confidence 45678999999999999997 9999753211 1111122222222111111223444 78899999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 360 Ps~~~l~ 366 (374)
T cd05106 360 PTFSQIS 366 (374)
T ss_pred cCHHHHH
Confidence 9999874
No 115
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.69 E-value=1.1e-05 Score=75.69 Aligned_cols=74 Identities=24% Similarity=0.424 Sum_probs=46.2
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|..... .....+.+........+....++ +.+++.+|++.+|++|
T Consensus 177 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~l~~~p~~R 245 (256)
T cd05112 177 KYSSKSDVWSFGVLMWEVFSEGKTPYENRS--------NSEVVETINAGFRLYKPRLASQS---VYELMQHCWKERPEDR 245 (256)
T ss_pred CcChHHHHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHcccChhhC
Confidence 45568999999999999998 888865211 00111111111111111111233 4489999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 246 p~~~~~ 251 (256)
T cd05112 246 PSFSLL 251 (256)
T ss_pred CCHHHH
Confidence 999987
No 116
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.69 E-value=1.6e-05 Score=74.79 Aligned_cols=74 Identities=24% Similarity=0.514 Sum_probs=47.8
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+|+||++++++++ |+.|..... .....+.+......+.+....+++. +++.+|++.+|++|
T Consensus 180 ~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~R 248 (261)
T cd05148 180 TFSTKSDVWSFGILLYEMFTYGQVPYPGMN--------NHEVYDQITAGYRMPCPAKCPQEIY---KIMLECWAAEPEDR 248 (261)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHHhCCcCCCCCCCCHHHH---HHHHHHcCCCchhC
Confidence 34568999999999999998 888875321 1111111222222222222233443 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|||+|+
T Consensus 249 pt~~~l 254 (261)
T cd05148 249 PSFKAL 254 (261)
T ss_pred cCHHHH
Confidence 999886
No 117
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.67 E-value=1.4e-05 Score=74.83 Aligned_cols=75 Identities=24% Similarity=0.320 Sum_probs=47.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++++++|+.|...... . .....+......+.+.....++. .+..+|++.+|++||
T Consensus 176 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~P~~Rp 244 (255)
T cd08219 176 PYNNKSDIWSLGCILYELCTLKHPFQANSW-------K-NLILKVCQGSYKPLPSHYSYELR---SLIKQMFKRNPRSRP 244 (255)
T ss_pred CcCchhhhhhhchhheehhhccCCCCCCCH-------H-HHHHHHhcCCCCCCCcccCHHHH---HHHHHHHhCCcccCC
Confidence 456789999999999999999999753110 0 00011111111112222223333 778899999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.||.
T Consensus 245 ~~~~il 250 (255)
T cd08219 245 SATTIL 250 (255)
T ss_pred CHHHHh
Confidence 999863
No 118
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.67 E-value=1.4e-05 Score=75.77 Aligned_cols=74 Identities=27% Similarity=0.418 Sum_probs=46.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ....+.+...-..+.+....+++ .+++..|++.+|++|
T Consensus 190 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 258 (272)
T cd05075 190 VYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--------SEIYDYLRQGNRLKQPPDCLDGL---YSLMSSCWLLNPKDR 258 (272)
T ss_pred CcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCCCHHH---HHHHHHHcCCCcccC
Confidence 35678999999999999998 7777642111 01111111111111112222333 488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|||.||
T Consensus 259 ps~~~l 264 (272)
T cd05075 259 PSFETL 264 (272)
T ss_pred cCHHHH
Confidence 999986
No 119
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.67 E-value=1.1e-05 Score=76.42 Aligned_cols=76 Identities=26% Similarity=0.349 Sum_probs=47.5
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|..... .....+.+......+.+.....+ +.+++..|+..+|.+
T Consensus 186 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~ 254 (270)
T cd05047 186 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAELYEKLPQGYRLEKPLNCDDE---VYDLMRQCWREKPYE 254 (270)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCccccC--------HHHHHHHHhCCCCCCCCCcCCHH---HHHHHHHHcccChhh
Confidence 345678999999999999996 998864211 00111111111111111112233 348999999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||+
T Consensus 255 Rps~~~il 262 (270)
T cd05047 255 RPSFAQIL 262 (270)
T ss_pred CCCHHHHH
Confidence 99999863
No 120
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.67 E-value=1.2e-05 Score=76.93 Aligned_cols=75 Identities=27% Similarity=0.408 Sum_probs=46.9
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|...... ....+.+........+.....+ +.++...|++.+|.+
T Consensus 197 ~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~---l~~li~~~l~~~p~~ 265 (288)
T cd05093 197 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEVIECITQGRVLQRPRTCPKE---VYDLMLGCWQREPHM 265 (288)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCcCCCCCCCCHH---HHHHHHHHccCChhh
Confidence 345678999999999999998 8888642211 0011111111111111111233 348999999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|+||
T Consensus 266 Rpt~~~v 272 (288)
T cd05093 266 RLNIKEI 272 (288)
T ss_pred CCCHHHH
Confidence 9999987
No 121
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=97.65 E-value=1.5e-05 Score=75.10 Aligned_cols=75 Identities=24% Similarity=0.339 Sum_probs=45.4
Q ss_pred eeccccccccchhhhhcccccCCCC-cccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHP-GELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++|..| ...... ......+........+....+++ .+++..|++.+|++
T Consensus 177 ~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~cl~~~p~~ 245 (262)
T cd05058 177 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--------FDITVYLLQGRRLLQPEYCPDPL---YEVMLSCWHPKPEM 245 (262)
T ss_pred CccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhcCCCCCCCCcCCHHH---HHHHHHHcCCChhh
Confidence 3456789999999999999996544 432110 01111111111111111122333 48999999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.||
T Consensus 246 Rp~~~~i 252 (262)
T cd05058 246 RPTFSEL 252 (262)
T ss_pred CCCHHHH
Confidence 9999986
No 122
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.65 E-value=1.5e-05 Score=74.94 Aligned_cols=75 Identities=25% Similarity=0.430 Sum_probs=47.3
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|...... ....+........+.+.....++ ..+..+|++.+|++
T Consensus 178 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~ 246 (260)
T cd05069 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--------REVLEQVERGYRMPCPQGCPESL---HELMKLCWKKDPDE 246 (260)
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCcccCHHH---HHHHHHHccCCccc
Confidence 345678999999999999999 8888652110 01111111111111222222333 37889999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|++|
T Consensus 247 Rp~~~~i 253 (260)
T cd05069 247 RPTFEYI 253 (260)
T ss_pred CcCHHHH
Confidence 9999886
No 123
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.65 E-value=1.7e-05 Score=75.13 Aligned_cols=75 Identities=24% Similarity=0.430 Sum_probs=47.2
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.||||||++++|+++ |+.|...... ....+.+......+.+.+...++ .+++..|++.+|++
T Consensus 186 ~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~ 254 (269)
T cd05065 186 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVINAIEQDYRLPPPMDCPTAL---HQLMLDCWQKDRNA 254 (269)
T ss_pred CcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--------HHHHHHHHcCCcCCCcccCCHHH---HHHHHHHcCCChhh
Confidence 345678999999999999886 9988753211 01111111111111122222333 38899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+|.+|
T Consensus 255 Rp~~~~i 261 (269)
T cd05065 255 RPKFGQI 261 (269)
T ss_pred CcCHHHH
Confidence 9999986
No 124
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.64 E-value=2e-05 Score=74.31 Aligned_cols=75 Identities=23% Similarity=0.431 Sum_probs=47.4
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|..... .....+........+......++ +.+++..|++.+|++
T Consensus 178 ~~~~~~~DvwslG~~l~ellt~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~p~~ 246 (262)
T cd05071 178 GRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQVERGYRMPCPPECPES---LHDLMCQCWRKEPEE 246 (262)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------hHHHHHHHhcCCCCCCccccCHH---HHHHHHHHccCCccc
Confidence 345778999999999999999 777764211 00111111111111112222233 448999999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.++
T Consensus 247 Rp~~~~~ 253 (262)
T cd05071 247 RPTFEYL 253 (262)
T ss_pred CCCHHHH
Confidence 9999876
No 125
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.64 E-value=2.3e-05 Score=73.42 Aligned_cols=75 Identities=17% Similarity=0.388 Sum_probs=47.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++++++|+.|.+... ............ ..+.+.....++. .+...|++.+|++||
T Consensus 177 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~l~---~li~~~l~~~p~~Rp 245 (256)
T cd08220 177 PYNQKSDIWALGCVLYELASLKRAFEAAN-------LPALVLKIMSGT-FAPISDRYSPDLR---QLILSMLNLDPSKRP 245 (256)
T ss_pred CCCcccchHHHHHHHHHHHhCCCCcccCc-------hHHHHHHHHhcC-CCCCCCCcCHHHH---HHHHHHccCChhhCC
Confidence 45678999999999999999999865311 000111111111 1111111223333 889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
||.|+.
T Consensus 246 t~~~ll 251 (256)
T cd08220 246 QLSQIM 251 (256)
T ss_pred CHHHHh
Confidence 999863
No 126
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.64 E-value=1.8e-05 Score=75.55 Aligned_cols=74 Identities=26% Similarity=0.460 Sum_probs=47.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |..|..... .....+.++.....+.+....+++. .+..+|++.+|++|
T Consensus 202 ~~~~~~Dv~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~cl~~~p~~R 270 (283)
T cd05090 202 KFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--------NQEVIEMVRKRQLLPCSEDCPPRMY---SLMTECWQEGPSRR 270 (283)
T ss_pred CCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHcCCcCCCCCCCCHHHH---HHHHHHcccCcccC
Confidence 45678999999999999998 888764211 1111222222221122222223444 78899999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.+|
T Consensus 271 p~~~~i 276 (283)
T cd05090 271 PRFKDI 276 (283)
T ss_pred cCHHHH
Confidence 999886
No 127
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.64 E-value=0.00018 Score=70.18 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=71.5
Q ss_pred CCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCC
Q 010041 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (519)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (519)
+..+++++.|++++|.++ .+| .+ ..+|++|.++++.--..+|..+. ++|++|++++|.....+|. .|+
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP-~L--P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~------sLe 115 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLP-VL--PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPE------SVR 115 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccC-CC--CCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccccccc------ccc
Confidence 334577888888888766 334 11 23588888877543345665442 5788888887732224442 466
Q ss_pred EEEccCCcCc--ccCchhccCCCCCCEEeccCCcCC--CCCCcccCCc-CccCeeeCCCCcCCCcCChhhccCCCCceee
Q 010041 177 TLSLDGNKLS--GTIPIEIESLRNLQWLDLSSNKLS--GTIPKEIGSL-RNLKELDLSSNKLGGVLPQEIENLKSLTALS 251 (519)
Q Consensus 177 ~L~L~~n~l~--~~~p~~l~~l~~L~~L~l~~n~l~--~~~p~~l~~l-~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~ 251 (519)
.|+++++... +.+| ++|+.|.+.+++.. ..+|. .+ ++|++|++++|... ..|..+. .+|+.|.
T Consensus 116 ~L~L~~n~~~~L~~LP------ssLk~L~I~~~n~~~~~~lp~---~LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ 183 (426)
T PRK15386 116 SLEIKGSATDSIKNVP------NGLTSLSINSYNPENQARIDN---LISPSLKTLSLTGCSNI-ILPEKLP--ESLQSIT 183 (426)
T ss_pred eEEeCCCCCcccccCc------chHhheecccccccccccccc---ccCCcccEEEecCCCcc-cCccccc--ccCcEEE
Confidence 6667665432 1233 24556665432211 01111 12 46777777766543 2232221 3566666
Q ss_pred cccc
Q 010041 252 MDAN 255 (519)
Q Consensus 252 l~~n 255 (519)
++.+
T Consensus 184 ls~n 187 (426)
T PRK15386 184 LHIE 187 (426)
T ss_pred eccc
Confidence 6544
No 128
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.63 E-value=1.6e-05 Score=75.77 Aligned_cols=74 Identities=22% Similarity=0.413 Sum_probs=47.0
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|.+.... ....+.+......+.+.....++ ..+...|++.+|++|
T Consensus 187 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~dp~~R 255 (279)
T cd05109 187 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--------REIPDLLEKGERLPQPPICTIDV---YMIMVKCWMIDSECR 255 (279)
T ss_pred CCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCcCCCCccCCHHH---HHHHHHHcCCChhhC
Confidence 45678999999999999988 8888653211 11111222111111111122333 378999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.|+
T Consensus 256 p~~~~l 261 (279)
T cd05109 256 PRFREL 261 (279)
T ss_pred cCHHHH
Confidence 999886
No 129
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.62 E-value=1.7e-05 Score=75.81 Aligned_cols=83 Identities=24% Similarity=0.432 Sum_probs=48.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC---CCCh-hHHHHHHHHHHHHHHhcCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP---PVNQ-KIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~-~~~~~~~~~~~la~~C~~~~p 509 (519)
..+.++|+||||++++|+++|+.|................+.+.+...... ..+. ....+ +..+..+|++.+|
T Consensus 178 ~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~dp 254 (284)
T cd06620 178 KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPED---LRDFVDACLLKDP 254 (284)
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHH---HHHHHHHHhcCCc
Confidence 456789999999999999999999763221100000011111111111111 1111 12223 4478899999999
Q ss_pred CCCCCcccCC
Q 010041 510 KSRPTMQRIS 519 (519)
Q Consensus 510 ~~RP~m~~v~ 519 (519)
++||+|.||.
T Consensus 255 ~~Rpt~~e~~ 264 (284)
T cd06620 255 TERPTPQQLC 264 (284)
T ss_pred ccCcCHHHHh
Confidence 9999999873
No 130
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.62 E-value=1.7e-05 Score=76.52 Aligned_cols=76 Identities=24% Similarity=0.416 Sum_probs=48.1
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... .......++.......+....+++ .+++.+|++.+|++|
T Consensus 219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~cl~~~p~~R 288 (302)
T cd05055 219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPV-------DSKFYKLIKEGYRMAQPEHAPAEI---YDIMKTCWDADPLKR 288 (302)
T ss_pred CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-------hHHHHHHHHcCCcCCCCCCCCHHH---HHHHHHHcCCCchhC
Confidence 45678999999999999998 8888642210 111112222222111111122333 488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.||+
T Consensus 289 pt~~ell 295 (302)
T cd05055 289 PTFKQIV 295 (302)
T ss_pred cCHHHHH
Confidence 9999873
No 131
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.61 E-value=0.00024 Score=69.28 Aligned_cols=130 Identities=15% Similarity=0.305 Sum_probs=78.9
Q ss_pred CEEEEEcCCCceecccCCCCCCCCC-CCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEE
Q 010041 77 RITDIGLQKSNIKGELGRLNFSCFP-NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (519)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 155 (519)
..+.|+++.+.... +..+| +|+.|.++++.--..+|..+. ++|++|++++|.....+|. +|+.|+
T Consensus 53 ~l~~L~Is~c~L~s------LP~LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~------sLe~L~ 118 (426)
T PRK15386 53 ASGRLYIKDCDIES------LPVLPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPE------SVRSLE 118 (426)
T ss_pred CCCEEEeCCCCCcc------cCCCCCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccccccc------ccceEE
Confidence 35577777653332 11333 699999998643345565553 5899999999833334554 577788
Q ss_pred ccCCCCC--ccCCccccCCCCCCEEEccCCcCc--ccCchhccCC-CCCCEEeccCCcCCCCCCcccCCcCccCeeeCCC
Q 010041 156 LGSNNLN--GTIPIEIGSVRNLETLSLDGNKLS--GTIPIEIESL-RNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSS 230 (519)
Q Consensus 156 L~~n~l~--~~~p~~l~~l~~L~~L~L~~n~l~--~~~p~~l~~l-~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~ 230 (519)
+..+... +.+|. +|+.|.+.+++.. ..+|. .+ ++|++|++++|... ..|..+- .+|+.|.++.
T Consensus 119 L~~n~~~~L~~LPs------sLk~L~I~~~n~~~~~~lp~---~LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~ 186 (426)
T PRK15386 119 IKGSATDSIKNVPN------GLTSLSINSYNPENQARIDN---LISPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHI 186 (426)
T ss_pred eCCCCCcccccCcc------hHhheecccccccccccccc---ccCCcccEEEecCCCcc-cCccccc--ccCcEEEecc
Confidence 8766542 23443 5677777543311 11111 12 57999999988865 3343332 5788898877
Q ss_pred Cc
Q 010041 231 NK 232 (519)
Q Consensus 231 n~ 232 (519)
+.
T Consensus 187 n~ 188 (426)
T PRK15386 187 EQ 188 (426)
T ss_pred cc
Confidence 63
No 132
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.61 E-value=1.6e-05 Score=74.48 Aligned_cols=75 Identities=23% Similarity=0.458 Sum_probs=47.8
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ....+.+........+....+++. +++.+|++.+|++|
T Consensus 173 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 241 (254)
T cd05083 173 KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--------KEVKECVEKGYRMEPPEGCPADVY---VLMTSCWETEPKKR 241 (254)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHHHhCCCCCCCCCcCCHHHH---HHHHHHcCCChhhC
Confidence 35578999999999999997 8888653211 011112222221111222223443 88999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|+||+
T Consensus 242 p~~~~l~ 248 (254)
T cd05083 242 PSFHKLR 248 (254)
T ss_pred cCHHHHH
Confidence 9999863
No 133
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.61 E-value=1.4e-05 Score=74.95 Aligned_cols=75 Identities=20% Similarity=0.433 Sum_probs=47.0
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC--CChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP--VNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.++|+||||++++|+++|+.|........ .. ..+....... .+....++ +.++...|++.+|++
T Consensus 175 ~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~---~~~~i~~~l~~~P~~ 243 (256)
T cd06612 175 GYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-------AI-FMIPNKPPPTLSDPEKWSPE---FNDFVKKCLVKDPEE 243 (256)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-------hh-hhhccCCCCCCCchhhcCHH---HHHHHHHHHhcChhh
Confidence 45678999999999999999999976321110 00 0000000000 11111223 347888999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||.
T Consensus 244 Rps~~~il 251 (256)
T cd06612 244 RPSAIQLL 251 (256)
T ss_pred CcCHHHHh
Confidence 99999873
No 134
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=97.60 E-value=2.3e-05 Score=78.04 Aligned_cols=80 Identities=20% Similarity=0.267 Sum_probs=49.4
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...++.+.|||+||++.+|+++|..|+. +..-.......+. ....++... ....+.++|. +|...||..++++
T Consensus 567 ~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGr--G~l~pd~s~-~~s~~pk~mk---~Ll~~C~~~~~~e 639 (678)
T KOG0193|consen 567 DNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGR--GYLMPDLSK-IRSNCPKAMK---RLLSDCWKFDREE 639 (678)
T ss_pred cCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecc--cccCccchh-hhccCHHHHH---HHHHHHHhcCccc
Confidence 3456789999999999999999999986 2211000000000 000011110 1122345565 8899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||.+.++
T Consensus 640 RP~F~~i 646 (678)
T KOG0193|consen 640 RPLFPQL 646 (678)
T ss_pred CccHHHH
Confidence 9998775
No 135
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.60 E-value=2.5e-05 Score=73.85 Aligned_cols=76 Identities=16% Similarity=0.359 Sum_probs=47.0
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||||++++|+++|+.|....... ........-.+..+..+....+++. .+..+|++.+|++||+
T Consensus 188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~Rpt 258 (268)
T cd06624 188 YGAPADIWSLGCTIVEMATGKPPFIELGEP------QAAMFKVGMFKIHPEIPESLSAEAK---NFILRCFEPDPDKRAS 258 (268)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCCccccCh------hhhHhhhhhhccCCCCCcccCHHHH---HHHHHHcCCCchhCCC
Confidence 456899999999999999999997532110 0000000000111112222223444 7899999999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
|.||.
T Consensus 259 ~~~ll 263 (268)
T cd06624 259 AHDLL 263 (268)
T ss_pred HHHHH
Confidence 99873
No 136
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.60 E-value=1.6e-05 Score=79.66 Aligned_cols=76 Identities=24% Similarity=0.421 Sum_probs=47.9
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |..|...... .......+......+.+.....++ .+++.+|++.+|++|
T Consensus 315 ~~~~~~DiwSlGvil~ellt~g~~P~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l---~~li~~cl~~dP~~R 384 (400)
T cd05105 315 LYTTLSDVWSYGILLWEIFSLGGTPYPGMIV-------DSTFYNKIKSGYRMAKPDHATQEV---YDIMVKCWNSEPEKR 384 (400)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCcccch-------hHHHHHHHhcCCCCCCCccCCHHH---HHHHHHHCccCHhHC
Confidence 45678999999999999986 8888653210 001111111111112222223344 488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.+|+
T Consensus 385 Pt~~~l~ 391 (400)
T cd05105 385 PSFLHLS 391 (400)
T ss_pred cCHHHHH
Confidence 9998863
No 137
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.59 E-value=0.00025 Score=58.67 Aligned_cols=107 Identities=16% Similarity=0.217 Sum_probs=43.1
Q ss_pred CCCCCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCC
Q 010041 94 RLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (519)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (519)
...|..+++|+.+.+.. .+......+|..+++|+.+.+.++ +...-...|.+++.|+.+.+.+ .+.......+..++
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~ 81 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCT 81 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-T
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccc
Confidence 44555566666666553 343333445556656666666553 4433334455555566666643 22222223344555
Q ss_pred CCCEEEccCCcCcccCchhccCCCCCCEEecc
Q 010041 174 NLETLSLDGNKLSGTIPIEIESLRNLQWLDLS 205 (519)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 205 (519)
+|+.+++..+ +...-...|.+. +|+.+.+.
T Consensus 82 ~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 82 NLKNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp TECEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred cccccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 5666655443 332223334444 55555544
No 138
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.58 E-value=2.5e-05 Score=74.21 Aligned_cols=75 Identities=28% Similarity=0.367 Sum_probs=47.2
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||||++++|+++ |+.|...... ......+........+.....+ +..++..|++.+|++
T Consensus 196 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~ 264 (277)
T cd05032 196 GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--------EEVLKFVIDGGHLDLPENCPDK---LLELMRMCWQYNPKM 264 (277)
T ss_pred CCCCcccchHHHHHHHHHhhccCCCCCccCCH--------HHHHHHHhcCCCCCCCCCCCHH---HHHHHHHHcCCChhh
Confidence 345678999999999999998 8888642110 0111111111111111222233 348999999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
|||+.|+
T Consensus 265 Rpt~~~l 271 (277)
T cd05032 265 RPTFLEI 271 (277)
T ss_pred CCCHHHH
Confidence 9999886
No 139
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.58 E-value=2.4e-05 Score=73.11 Aligned_cols=74 Identities=22% Similarity=0.420 Sum_probs=47.2
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |..|..... .....+.+........+.....+ +.+++..|++.+|++|
T Consensus 171 ~~~~~~Di~slG~i~~~l~t~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~R 239 (251)
T cd05041 171 RYTSESDVWSYGILLWETFSLGDTPYPGMS--------NQQTRERIESGYRMPAPQLCPEE---IYRLMLQCWAYDPENR 239 (251)
T ss_pred CCCcchhHHHHHHHHHHHHhccCCCCccCC--------HHHHHHHHhcCCCCCCCccCCHH---HHHHHHHHhccChhhC
Confidence 45678999999999999998 777764321 01111222211111112222233 4488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.||
T Consensus 240 p~~~el 245 (251)
T cd05041 240 PSFSEI 245 (251)
T ss_pred cCHHHH
Confidence 999986
No 140
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.58 E-value=1.7e-05 Score=76.74 Aligned_cols=75 Identities=24% Similarity=0.419 Sum_probs=47.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|..... .....+.+......+.+.....++. ++...|++.+|++|
T Consensus 218 ~~~~~~DvwslG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 286 (307)
T cd05098 218 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEELFKLLKEGHRMDKPSNCTNELY---MMMRDCWHAVPSQR 286 (307)
T ss_pred CCCcHHHHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHHcCCCCCCCCcCCHHHH---HHHHHHcccChhhC
Confidence 35678999999999999998 777764211 0111112222211122222233444 78999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 287 ps~~evl 293 (307)
T cd05098 287 PTFKQLV 293 (307)
T ss_pred cCHHHHH
Confidence 9999873
No 141
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.58 E-value=1.8e-05 Score=75.31 Aligned_cols=74 Identities=28% Similarity=0.400 Sum_probs=46.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhh-hhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLIN-VLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.+.|+||||++++|+++ |..|..... .....+ ....... ..+.....++ .+++.+|++.+|++
T Consensus 197 ~~~~~~Di~slG~~l~el~~~~~~p~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~---~~li~~~l~~~p~~ 264 (277)
T cd05062 197 VFTTYSDVWSFGVVLWEIATLAEQPYQGMS--------NEQVLRFVMEGGLL-DKPDNCPDML---FELMRMCWQYNPKM 264 (277)
T ss_pred CcCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHcCCcC-CCCCCCCHHH---HHHHHHHcCCChhh
Confidence 45678999999999999998 677764211 001111 1111111 1122222333 48899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||++.|++
T Consensus 265 Rps~~e~l 272 (277)
T cd05062 265 RPSFLEII 272 (277)
T ss_pred CcCHHHHH
Confidence 99999863
No 142
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.57 E-value=1.7e-05 Score=74.44 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=46.6
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|...... ......+..............++. .+..+|++.+|++|
T Consensus 175 ~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 243 (256)
T cd05082 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRVEKGYKMDAPDGCPPVVY---DVMKQCWHLDAATR 243 (256)
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCCCCCCCCCHHHH---HHHHHHhcCChhhC
Confidence 45678999999999999997 8888642110 001111111111111122223343 78999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.|+
T Consensus 244 pt~~~l 249 (256)
T cd05082 244 PSFLQL 249 (256)
T ss_pred cCHHHH
Confidence 999986
No 143
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.57 E-value=2.7e-05 Score=74.07 Aligned_cols=75 Identities=23% Similarity=0.475 Sum_probs=47.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|....... .....+...-.+..+.....++. ++...|++.+|++||
T Consensus 177 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~Rp 245 (277)
T cd06641 177 AYDSKADIWSLGITAIELAKGEPPHSELHPM--------KVLFLIPKNNPPTLEGNYSKPLK---EFVEACLNKEPSFRP 245 (277)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCccchH--------HHHHHHhcCCCCCCCcccCHHHH---HHHHHHccCChhhCc
Confidence 4456899999999999999999997532110 11111111111111222223333 789999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|.|++
T Consensus 246 ~~~~~l 251 (277)
T cd06641 246 TAKELL 251 (277)
T ss_pred CHHHHH
Confidence 999863
No 144
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.57 E-value=0.00014 Score=62.66 Aligned_cols=81 Identities=28% Similarity=0.310 Sum_probs=36.0
Q ss_pred CcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccC-CccccCCCCCCEEEcc
Q 010041 103 LQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTI-PIEIGSVRNLETLSLD 181 (519)
Q Consensus 103 L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~ 181 (519)
...+||++|.+... ..|..++.|.+|.|.+|+|+.+-|.--..+++|+.|.|.+|++.... -..+..+++|++|.+-
T Consensus 44 ~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll 121 (233)
T KOG1644|consen 44 FDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLL 121 (233)
T ss_pred cceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeec
Confidence 34455555544321 23444455555555555555443333333445555555555443110 0113344455555555
Q ss_pred CCcC
Q 010041 182 GNKL 185 (519)
Q Consensus 182 ~n~l 185 (519)
+|.+
T Consensus 122 ~Npv 125 (233)
T KOG1644|consen 122 GNPV 125 (233)
T ss_pred CCch
Confidence 5444
No 145
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.57 E-value=3e-05 Score=72.94 Aligned_cols=74 Identities=31% Similarity=0.557 Sum_probs=47.1
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ......+......+.......++. .+..+|++.+|++|
T Consensus 179 ~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~R 247 (260)
T cd05073 179 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRALERGYRMPRPENCPEELY---NIMMRCWKNRPEER 247 (260)
T ss_pred CcCccccchHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHhCCCCCCCcccCCHHHH---HHHHHHcccCcccC
Confidence 35668999999999999998 8888753210 011111122211121222223444 88899999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.++
T Consensus 248 p~~~~l 253 (260)
T cd05073 248 PTFEYI 253 (260)
T ss_pred cCHHHH
Confidence 999876
No 146
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.57 E-value=2.6e-05 Score=73.87 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=46.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|........ ....................++ ..+..+|+..+|.+||
T Consensus 192 ~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~Rp 261 (272)
T cd06637 192 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-------ALFLIPRNPAPRLKSKKWSKKF---QSFIESCLVKNHSQRP 261 (272)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccCHHH-------HHHHHhcCCCCCCCCCCcCHHH---HHHHHHHcCCChhhCC
Confidence 34568999999999999999999975321110 0000000000001111122333 3788999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.||+
T Consensus 262 t~~~il 267 (272)
T cd06637 262 TTEQLM 267 (272)
T ss_pred CHHHHh
Confidence 999874
No 147
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.56 E-value=2e-05 Score=75.22 Aligned_cols=82 Identities=23% Similarity=0.371 Sum_probs=47.6
Q ss_pred ccccccccchhhhhcccccCCCCcccccc-cccCCCCCc-------chhhhhhhccCCCCChhHHHHHHHHHHHHHHhcC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSS-LSSSSGPKI-------MLINVLDQRLSPPVNQKIVQDIILVSTIAFACLS 506 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~-~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~ 506 (519)
.+.++|+||||++++|+++|..|...... +........ .+.+.+......+.+....+++. +++.+|++
T Consensus 188 ~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~cl~ 264 (284)
T cd05081 188 FSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIY---AIMKECWN 264 (284)
T ss_pred cChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHH---HHHHHHcc
Confidence 45689999999999999998776432111 000000000 01122222211112222233444 88999999
Q ss_pred CCCCCCCCcccCC
Q 010041 507 SQPKSRPTMQRIS 519 (519)
Q Consensus 507 ~~p~~RP~m~~v~ 519 (519)
.+|++||||.||+
T Consensus 265 ~~p~~Rpt~~ei~ 277 (284)
T cd05081 265 NDPSQRPSFSELA 277 (284)
T ss_pred CChhhCCCHHHHH
Confidence 9999999999873
No 148
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.55 E-value=1.7e-05 Score=76.51 Aligned_cols=76 Identities=21% Similarity=0.363 Sum_probs=47.0
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|...... ....+.+......+.+..... .+..+...|+..+|++
T Consensus 186 ~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~li~~c~~~~p~~ 254 (303)
T cd05110 186 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--------REIPDLLEKGERLPQPPICTI---DVYMVMVKCWMIDADS 254 (303)
T ss_pred CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHCCCCCCCCCCCCH---HHHHHHHHHcCCChhh
Confidence 345678999999999999987 8888642110 011111111111111111122 3448899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||+
T Consensus 255 Rp~~~~l~ 262 (303)
T cd05110 255 RPKFKELA 262 (303)
T ss_pred CcCHHHHH
Confidence 99999863
No 149
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.55 E-value=2.9e-05 Score=73.32 Aligned_cols=76 Identities=18% Similarity=0.301 Sum_probs=46.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCC-hhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVN-QKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++|..|...... ........+.....++.. ....+++. .+...|++.+|++|
T Consensus 182 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 252 (267)
T cd08229 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQCDYPPLPSDHYSEELR---QLVNMCINPDPEKR 252 (267)
T ss_pred CccchhhHHHHHHHHHHHHhCCCCcccccc------hHHHHhhhhhcCCCCCCCcccccHHHH---HHHHHhcCCCcccC
Confidence 345689999999999999999999642110 000011111111111111 11223333 78889999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|||.+|
T Consensus 253 pt~~~i 258 (267)
T cd08229 253 PDITYV 258 (267)
T ss_pred CCHHHH
Confidence 999965
No 150
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.55 E-value=2.4e-05 Score=75.47 Aligned_cols=74 Identities=26% Similarity=0.386 Sum_probs=46.3
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|++| |..|...... ....+.+........+.....++ .++..+|++.+|++|
T Consensus 199 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 267 (303)
T cd05088 199 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEKLPQGYRLEKPLNCDDEV---YDLMRQCWREKPYER 267 (303)
T ss_pred CCcccccchhhhhHHHHHHhcCCCCcccCCh--------HHHHHHHhcCCcCCCCCCCCHHH---HHHHHHHcCCChhhC
Confidence 34578999999999999998 8888642110 00111111111111111122333 488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.++
T Consensus 268 p~~~~i 273 (303)
T cd05088 268 PSFAQI 273 (303)
T ss_pred cCHHHH
Confidence 999886
No 151
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.54 E-value=2e-05 Score=75.40 Aligned_cols=76 Identities=24% Similarity=0.381 Sum_probs=46.8
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |..|...... ........+.... +.+.....++ .++..+|++.+|++
T Consensus 207 ~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~l---~~li~~~l~~~p~~ 275 (288)
T cd05050 207 NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-------EEVIYYVRDGNVL-SCPDNCPLEL---YNLMRLCWSKLPSD 275 (288)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHhcCCCC-CCCCCCCHHH---HHHHHHHcccCccc
Confidence 345678999999999999987 7777642110 0001111111111 1111222333 48899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||+
T Consensus 276 Rpt~~el~ 283 (288)
T cd05050 276 RPSFASIN 283 (288)
T ss_pred CCCHHHHH
Confidence 99999873
No 152
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.54 E-value=2.2e-05 Score=73.62 Aligned_cols=76 Identities=24% Similarity=0.429 Sum_probs=47.2
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhh-ccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
...+.++|+||||++++|+++ |+.|....... .....++. ......+.....+ +..+..+|++.+|+
T Consensus 175 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~ 243 (257)
T cd05040 175 RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------QILKKIDKEGERLERPEACPQD---IYNVMLQCWAHNPA 243 (257)
T ss_pred cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHhcCCcCCCCccCCHH---HHHHHHHHCCCCcc
Confidence 345678999999999999998 99997422110 00011110 0000111112233 44889999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||++.||+
T Consensus 244 ~Rps~~~~~ 252 (257)
T cd05040 244 DRPTFAALR 252 (257)
T ss_pred cCCCHHHHH
Confidence 999999873
No 153
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.54 E-value=0.00017 Score=62.17 Aligned_cols=103 Identities=24% Similarity=0.242 Sum_probs=50.8
Q ss_pred CCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccC-chhccCCCCCCEEec
Q 010041 126 NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTI-PIEIESLRNLQWLDL 204 (519)
Q Consensus 126 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~l 204 (519)
....++|++|.+... ..|..++.|.+|.+.+|.++..-|.--.-+++|++|.|.+|++.... -.-+..+|+|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 344566666655422 33555666666666666665444433334555666666666553110 012344555555555
Q ss_pred cCCcCCCCCC---cccCCcCccCeeeCCC
Q 010041 205 SSNKLSGTIP---KEIGSLRNLKELDLSS 230 (519)
Q Consensus 205 ~~n~l~~~~p---~~l~~l~~L~~L~l~~ 230 (519)
-+|..+..-- ..+..+++|+.||+..
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhh
Confidence 5555442211 1233445555555443
No 154
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.54 E-value=2.4e-05 Score=75.57 Aligned_cols=76 Identities=25% Similarity=0.409 Sum_probs=47.0
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |..|..... .....+.+........+.....++. .+..+|++.+|++
T Consensus 214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~cl~~~p~~ 282 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKLLKEGHRMDKPANCTNELY---MMMRDCWHAIPSH 282 (304)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHcCCcCCCCCCCCHHHH---HHHHHHcccChhh
Confidence 345678999999999999998 666653211 0011111111111111222233444 7899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||+
T Consensus 283 Rps~~e~l 290 (304)
T cd05101 283 RPTFKQLV 290 (304)
T ss_pred CCCHHHHH
Confidence 99999873
No 155
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.54 E-value=4.3e-05 Score=71.88 Aligned_cols=76 Identities=25% Similarity=0.445 Sum_probs=47.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC---ChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV---NQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..+.++|+||||++++|+++|+.|....... ............+.. ......+ +.++..+|++.+|.
T Consensus 180 ~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~ 249 (262)
T cd06613 180 GYDGKCDIWALGITAIELAELQPPMFDLHPM-------RALFLISKSNFPPPKLKDKEKWSPV---FHDFIKKCLTKDPK 249 (262)
T ss_pred CcCchhhhHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCCCccccchhhhhHH---HHHHHHHHcCCChh
Confidence 4567899999999999999999997532110 000000001011110 1112223 44899999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||+++||+
T Consensus 250 ~Rpt~~~il 258 (262)
T cd06613 250 KRPTATKLL 258 (262)
T ss_pred hCCCHHHHh
Confidence 999999874
No 156
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.54 E-value=3.6e-05 Score=72.45 Aligned_cols=78 Identities=18% Similarity=0.317 Sum_probs=48.6
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
....+.+.|+||+|++++|+++|+.|........ ..............+....+++. .+...|+..+|++
T Consensus 181 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~ 250 (263)
T cd06625 181 GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-------AIFKIATQPTNPQLPSHVSPDAR---NFLRRTFVENAKK 250 (263)
T ss_pred cCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-------HHHHHhccCCCCCCCccCCHHHH---HHHHHHhhcCccc
Confidence 3346678999999999999999999964321110 00111111111112222223333 7889999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||++.|+.
T Consensus 251 Rpt~~~ll 258 (263)
T cd06625 251 RPSAEELL 258 (263)
T ss_pred CCCHHHHh
Confidence 99998863
No 157
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.53 E-value=3e-05 Score=73.25 Aligned_cols=77 Identities=18% Similarity=0.275 Sum_probs=47.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCC-hhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVN-QKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++|+.|..... .......+.+.....++.. ....++ +.++..+|++.+|++|
T Consensus 182 ~~~~~~Di~slG~~l~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~p~~R 252 (267)
T cd08228 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLFSLCQKIEQCDYPPLPTEHYSEK---LRELVSMCIYPDPDQR 252 (267)
T ss_pred CCCchhhHHHHHHHHHHHhcCCCCCcccc------ccHHHHHHHHhcCCCCCCChhhcCHH---HHHHHHHHCCCCcccC
Confidence 34567999999999999999999964211 0001111222211111111 111223 4488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.||.
T Consensus 253 p~~~~vl 259 (267)
T cd08228 253 PDIGYVH 259 (267)
T ss_pred cCHHHHH
Confidence 9999873
No 158
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.53 E-value=2.5e-05 Score=73.75 Aligned_cols=75 Identities=19% Similarity=0.382 Sum_probs=44.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|....... ............+..+....+.+ +-.+.|+..+|++||
T Consensus 185 ~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~----~~li~~~~~~p~~Rp 253 (266)
T cd06651 185 GYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-------AAIFKIATQPTNPQLPSHISEHA----RDFLGCIFVEARHRP 253 (266)
T ss_pred CCCchhhhHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcCCCCCCCchhcCHHH----HHHHHHhcCChhhCc
Confidence 4467899999999999999999997532111 00111111111111121112222 334579999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|+||.
T Consensus 254 ~~~eil 259 (266)
T cd06651 254 SAEELL 259 (266)
T ss_pred CHHHHh
Confidence 999873
No 159
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.52 E-value=3.1e-05 Score=81.85 Aligned_cols=82 Identities=24% Similarity=0.369 Sum_probs=36.4
Q ss_pred CCCCCEEEccCCCCCc-cCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCC-CCCcccCCcCccCe
Q 010041 148 LRNLEVLDLGSNNLNG-TIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSG-TIPKEIGSLRNLKE 225 (519)
Q Consensus 148 l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~ 225 (519)
+|+|+.|.+++-.+.. .......++++|..||+++++++.. ..++++++|+.|.+.+=.+.. ..-..+.++++|+.
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~v 224 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRV 224 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCe
Confidence 4555555555433321 1111223455555555555555422 344555555555554433332 11123444555555
Q ss_pred eeCCCC
Q 010041 226 LDLSSN 231 (519)
Q Consensus 226 L~l~~n 231 (519)
||+|..
T Consensus 225 LDIS~~ 230 (699)
T KOG3665|consen 225 LDISRD 230 (699)
T ss_pred eecccc
Confidence 555544
No 160
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.52 E-value=4.1e-05 Score=74.01 Aligned_cols=75 Identities=21% Similarity=0.392 Sum_probs=46.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC-ChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV-NQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++|+.|........ ....... ...+.. .....++ +..+...|++.+|++|
T Consensus 190 ~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~---~~~li~~~l~~~p~~R 258 (307)
T cd06607 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQ-NDSPTLSSNDWSDY---FRNFVDSCLQKIPQDR 258 (307)
T ss_pred CCCcccchHHHHHHHHHHHcCCCCCCCccHHH-------HHHHHhc-CCCCCCCchhhCHH---HHHHHHHHhcCChhhC
Confidence 35568999999999999999999964321100 0000000 000111 1112233 3478889999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.+|+
T Consensus 259 p~~~~il 265 (307)
T cd06607 259 PSSEELL 265 (307)
T ss_pred cCHHHHh
Confidence 9999874
No 161
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.52 E-value=3.2e-05 Score=75.08 Aligned_cols=75 Identities=24% Similarity=0.427 Sum_probs=47.1
Q ss_pred eeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++ |+.|...... ....+.+........+.....++. .++.+|++.+|++
T Consensus 211 ~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~---~li~~cl~~~p~~ 279 (314)
T cd05099 211 RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--------EELFKLLREGHRMDKPSNCTHELY---MLMRECWHAVPTQ 279 (314)
T ss_pred CCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCCCHHHH---HHHHHHcCCCccc
Confidence 345678999999999999998 8887642110 011111111111111222223444 7899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.|+
T Consensus 280 Rps~~~l 286 (314)
T cd05099 280 RPTFKQL 286 (314)
T ss_pred CcCHHHH
Confidence 9999886
No 162
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=97.51 E-value=3.9e-05 Score=68.10 Aligned_cols=78 Identities=22% Similarity=0.467 Sum_probs=51.4
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
...+++.||||+|++++++..|.-|++..-. .+.. ....+....+.-+-.....+.+. ++.-+|++.+|.+|
T Consensus 216 ~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----~GgS-laLAv~n~q~s~P~~~~yse~l~---~lik~mlqvdP~qR 287 (302)
T KOG2345|consen 216 CTITERTDIWSLGCTLYAMMFGESPFERIYQ----QGGS-LALAVQNAQISIPNSSRYSEALH---QLIKSMLQVDPNQR 287 (302)
T ss_pred cccccccchhhhhHHHHHHHHcCCcchHHhh----cCCe-EEEeeeccccccCCCCCccHHHH---HHHHHHhcCCcccC
Confidence 3567899999999999999999999985432 1111 11122222222221222334444 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+..|+
T Consensus 288 P~i~~l 293 (302)
T KOG2345|consen 288 PTIPEL 293 (302)
T ss_pred CCHHHH
Confidence 998875
No 163
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.50 E-value=2.7e-05 Score=73.01 Aligned_cols=75 Identities=20% Similarity=0.409 Sum_probs=47.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|..... .............. +..+...+++ .++..+|++.+|++||
T Consensus 178 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~---~~~i~~~l~~~p~~Rp 246 (257)
T cd08225 178 PYNNKTDIWSLGCVLYELCTLKHPFEGNN-------LHQLVLKICQGYFA-PISPNFSRDL---RSLISQLFKVSPRDRP 246 (257)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHhcccCC-CCCCCCCHHH---HHHHHHHhccChhhCc
Confidence 45678999999999999999999965211 00011111111111 1111122333 3788999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
||.||.
T Consensus 247 t~~~ll 252 (257)
T cd08225 247 SITSIL 252 (257)
T ss_pred CHHHHh
Confidence 999873
No 164
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.48 E-value=3.2e-05 Score=72.74 Aligned_cols=74 Identities=24% Similarity=0.485 Sum_probs=47.3
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||+|++++|+++ |+.|..... .....+.+......+.+....+++ .+++.+|++.+|++|
T Consensus 180 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~l~~~p~~R 248 (261)
T cd05034 180 RFTIKSDVWSFGILLTEIVTYGRVPYPGMT--------NREVLEQVERGYRMPRPPNCPEEL---YDLMLQCWDKDPEER 248 (261)
T ss_pred CcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCCCCCCCCCHHH---HHHHHHHcccCcccC
Confidence 45568999999999999998 998864211 111111111111111122222344 488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+++|+
T Consensus 249 p~~~~l 254 (261)
T cd05034 249 PTFEYL 254 (261)
T ss_pred CCHHHH
Confidence 999886
No 165
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.48 E-value=4.1e-05 Score=72.28 Aligned_cols=75 Identities=24% Similarity=0.419 Sum_probs=47.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+|++|++++|+++|+.|........ ...... ....+..+....+++. .+..+|++.+|++||
T Consensus 188 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~---~li~~~l~~~p~~Rp 256 (267)
T cd06628 188 SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-------AIFKIG-ENASPEIPSNISSEAI---DFLEKTFEIDHNKRP 256 (267)
T ss_pred CCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-------HHHHHh-ccCCCcCCcccCHHHH---HHHHHHccCCchhCc
Confidence 34568999999999999999999975321110 001111 1111122222234444 778899999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.||.
T Consensus 257 ~~~~il 262 (267)
T cd06628 257 TAAELL 262 (267)
T ss_pred CHHHHh
Confidence 998863
No 166
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.48 E-value=6.2e-05 Score=70.75 Aligned_cols=79 Identities=23% Similarity=0.476 Sum_probs=51.6
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCc--chhhhhhhccCCCCCh-hHHHHHHHHHHHHHHhcCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI--MLINVLDQRLSPPVNQ-KIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~-~~~~~~~~~~~la~~C~~~~ 508 (519)
....+.++||||||..++|..+|+.|+..-. .....+ .++.++++. .+..+. ...+|+. ...-.|++.+
T Consensus 251 g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~----~~~~~~~~Ll~~Iv~~p-pP~lP~~~fS~ef~---~FV~~CL~Kd 322 (364)
T KOG0581|consen 251 GESYSVKSDIWSLGLSLLELAIGRFPYPPPN----PPYLDIFELLCAIVDEP-PPRLPEGEFSPEFR---SFVSCCLRKD 322 (364)
T ss_pred CCcCCcccceecccHHHHHHhhCCCCCCCcC----CCCCCHHHHHHHHhcCC-CCCCCcccCCHHHH---HHHHHHhcCC
Confidence 4456778999999999999999999986320 001111 122333322 222222 2445665 8899999999
Q ss_pred CCCCCCcccC
Q 010041 509 PKSRPTMQRI 518 (519)
Q Consensus 509 p~~RP~m~~v 518 (519)
|.+||+.+|.
T Consensus 323 p~~R~s~~qL 332 (364)
T KOG0581|consen 323 PSERPSAKQL 332 (364)
T ss_pred cccCCCHHHH
Confidence 9999998764
No 167
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.47 E-value=4e-05 Score=72.44 Aligned_cols=74 Identities=22% Similarity=0.436 Sum_probs=46.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+|+||++++|+++ |+.|....... .....+......+......+++. +++..|++.+|++|
T Consensus 185 ~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 253 (267)
T cd05066 185 KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKAIEEGYRLPAPMDCPAALH---QLMLDCWQKDRNER 253 (267)
T ss_pred ccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--------HHHHHHhCCCcCCCCCCCCHHHH---HHHHHHcccCchhC
Confidence 45678999999999999876 99986532110 01111111111111112223443 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.+|
T Consensus 254 p~~~~i 259 (267)
T cd05066 254 PKFEQI 259 (267)
T ss_pred CCHHHH
Confidence 999986
No 168
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.47 E-value=2.7e-05 Score=78.06 Aligned_cols=76 Identities=22% Similarity=0.362 Sum_probs=48.3
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... .....+.+........+.....++. +++..|++.+|.+|
T Consensus 317 ~~~~~~DvwslGvil~e~l~~g~~P~~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~l~---~li~~cl~~~P~~R 386 (401)
T cd05107 317 LYTTLSDVWSFGILLWEIFTLGGTPYPELPM-------NEQFYNAIKRGYRMAKPAHASDEIY---EIMQKCWEEKFEIR 386 (401)
T ss_pred CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc-------hHHHHHHHHcCCCCCCCCCCCHHHH---HHHHHHcCCChhHC
Confidence 34678999999999999998 8888643210 0011122222222222222223444 88999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|+||+
T Consensus 387 Ps~~ell 393 (401)
T cd05107 387 PDFSQLV 393 (401)
T ss_pred cCHHHHH
Confidence 9999874
No 169
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.45 E-value=4.6e-05 Score=71.88 Aligned_cols=76 Identities=17% Similarity=0.289 Sum_probs=47.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCCh-hHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQ-KIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++|+.|..... .......+.+.....++.+. ...++ +.++..+|+..+|++|
T Consensus 182 ~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~cl~~~p~~R 252 (267)
T cd08224 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIEKCDYPPLPADHYSEE---LRDLVSRCINPDPEKR 252 (267)
T ss_pred CCCchhcHHHHHHHHHHHHHCCCCcccCC------ccHHHHHhhhhcCCCCCCChhhcCHH---HHHHHHHHcCCCcccC
Confidence 35568999999999999999999964211 00000111111122222221 12223 3488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.+|
T Consensus 253 p~~~~i 258 (267)
T cd08224 253 PDISYV 258 (267)
T ss_pred CCHHHH
Confidence 999886
No 170
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.45 E-value=4.1e-05 Score=71.77 Aligned_cols=74 Identities=22% Similarity=0.408 Sum_probs=46.4
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|...... ..+.+.+........+....+++. .+..+|+..+|++|
T Consensus 175 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 243 (256)
T cd05039 175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPHVEKGYRMEAPEGCPPEVY---KVMKDCWELDPAKR 243 (256)
T ss_pred cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHhcCCCCCCccCCCHHHH---HHHHHHhccChhhC
Confidence 45568999999999999996 8888642210 011111111111111112223443 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.||
T Consensus 244 p~~~~l 249 (256)
T cd05039 244 PTFKQL 249 (256)
T ss_pred cCHHHH
Confidence 999886
No 171
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=97.44 E-value=5.3e-05 Score=71.75 Aligned_cols=73 Identities=29% Similarity=0.463 Sum_probs=45.0
Q ss_pred ccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.++|+||||++++|+++ |+.|...... ......+...-....+....++ +.+++.+|++.+|++||
T Consensus 192 ~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~l~~~p~~Rp 260 (273)
T cd05074 192 YTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNYLIKGNRLKQPPDCLED---VYELMCQCWSPEPKCRP 260 (273)
T ss_pred cchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHHHHcCCcCCCCCCCCHH---HHHHHHHHcCCChhhCc
Confidence 4568999999999999998 7787542110 0011111000000011112233 44899999999999999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
+++||
T Consensus 261 s~~~~ 265 (273)
T cd05074 261 SFQHL 265 (273)
T ss_pred CHHHH
Confidence 99986
No 172
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.43 E-value=7.8e-05 Score=70.18 Aligned_cols=75 Identities=25% Similarity=0.475 Sum_probs=46.4
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChh--HHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQK--IVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.+.|+|+||++++|+++|+.|...... .......+.....+..+.. ..+++ ..+...|++.+|++|
T Consensus 183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 252 (264)
T cd06626 183 HGRAADIWSLGCVVLEMATGKRPWSELDN-------EFQIMFHVGAGHKPPIPDSLQLSPEG---KDFLDRCLESDPKKR 252 (264)
T ss_pred CCcccchHHHHHHHHHHHhCCCCccCCcc-------hHHHHHHHhcCCCCCCCcccccCHHH---HHHHHHHccCCcccC
Confidence 56789999999999999999999753210 0000000000111111111 12233 377889999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.|+.
T Consensus 253 ~~~~~i~ 259 (264)
T cd06626 253 PTASELL 259 (264)
T ss_pred CCHHHHh
Confidence 9999873
No 173
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.43 E-value=3.3e-05 Score=79.73 Aligned_cols=74 Identities=28% Similarity=0.439 Sum_probs=47.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ........... ..+.+....+++. .+...|++.+|++||
T Consensus 221 ~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~l~---~li~~~L~~dP~~RP 289 (496)
T PTZ00283 221 PYSKKADMFSLGVLLYELLTLKRPFDGENM-------EEVMHKTLAGR-YDPLPPSISPEMQ---EIVTALLSSDPKRRP 289 (496)
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHhcCC-CCCCCCCCCHHHH---HHHHHHcccChhhCc
Confidence 356789999999999999999999752110 00001111111 1112222234444 889999999999999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
++.|+
T Consensus 290 s~~el 294 (496)
T PTZ00283 290 SSSKL 294 (496)
T ss_pred CHHHH
Confidence 99886
No 174
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.43 E-value=5.5e-05 Score=74.79 Aligned_cols=74 Identities=20% Similarity=0.309 Sum_probs=45.6
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCc-chhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI-MLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTM 515 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 515 (519)
.++||||||++++|+++|+.|+.... ...+ .....+..............++. ++...|++.+|++||++
T Consensus 252 ~~~DvwslGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~li~~~l~~~P~~Rpt~ 322 (353)
T PLN00034 252 YAGDIWSLGVSILEFYLGRFPFGVGR------QGDWASLMCAICMSQPPEAPATASREFR---HFISCCLQREPAKRWSA 322 (353)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCC------CccHHHHHHHHhccCCCCCCCccCHHHH---HHHHHHccCChhhCcCH
Confidence 47899999999999999999976211 0000 00001111111111112223444 78899999999999999
Q ss_pred ccCC
Q 010041 516 QRIS 519 (519)
Q Consensus 516 ~~v~ 519 (519)
.||+
T Consensus 323 ~ell 326 (353)
T PLN00034 323 MQLL 326 (353)
T ss_pred HHHh
Confidence 9874
No 175
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.43 E-value=7.5e-05 Score=69.86 Aligned_cols=75 Identities=25% Similarity=0.305 Sum_probs=48.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+|++|++++|+++|+.|...... ......+.....++.+....+++ ..+...|++.+|++||
T Consensus 177 ~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~Rp 245 (256)
T cd08530 177 PYSYKSDIWSLGCLLYEMATFAPPFEARSM--------QDLRYKVQRGKYPPIPPIYSQDL---QNFIRSMLQVKPKLRP 245 (256)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCCCCCchhhCHHH---HHHHHHHcCCCcccCC
Confidence 345689999999999999999999753211 01111122222222222222344 4889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.|+.
T Consensus 246 ~~~~~l 251 (256)
T cd08530 246 NCDKIL 251 (256)
T ss_pred CHHHHh
Confidence 999863
No 176
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.42 E-value=4.1e-05 Score=71.64 Aligned_cols=77 Identities=21% Similarity=0.399 Sum_probs=47.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+|+||++++++++|+.|....... ................+.....++ .+++.+|++.+|++||
T Consensus 179 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l---~~~i~~~l~~~p~~Rp 249 (260)
T cd06606 179 EYGRAADIWSLGCTVIEMATGKPPWSELGNP------MAALYKIGSSGEPPEIPEHLSEEA---KDFLRKCLRRDPKKRP 249 (260)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCch------HHHHHhccccCCCcCCCcccCHHH---HHHHHHhCcCChhhCC
Confidence 3677899999999999999999997543200 000001111011111112222333 3788999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.|++
T Consensus 250 ~~~~ll 255 (260)
T cd06606 250 TADELL 255 (260)
T ss_pred CHHHHh
Confidence 999863
No 177
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.41 E-value=4.2e-05 Score=74.98 Aligned_cols=75 Identities=27% Similarity=0.427 Sum_probs=46.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |..|...... ......+........+.....+ +..++.+|++.+|++|
T Consensus 212 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---l~~li~~cl~~~p~~R 280 (334)
T cd05100 212 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--------EELFKLLKEGHRMDKPANCTHE---LYMIMRECWHAVPSQR 280 (334)
T ss_pred CcCchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCCCHH---HHHHHHHHcccChhhC
Confidence 34568999999999999998 7777542110 0111111111111111122233 3488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.|++
T Consensus 281 ps~~ell 287 (334)
T cd05100 281 PTFKQLV 287 (334)
T ss_pred cCHHHHH
Confidence 9999863
No 178
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.41 E-value=3.1e-05 Score=74.08 Aligned_cols=77 Identities=21% Similarity=0.311 Sum_probs=47.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhh---hhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL---DQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..+.++|+||||++++|+++|+.|........ ....+.. .+.+..........+ +..+..+|++.+|+
T Consensus 186 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~p~ 256 (288)
T cd06616 186 GYDVRSDVWSLGITLYEVATGKFPYPKWNSVF------DQLTQVVKGDPPILSNSEEREFSPS---FVNFINLCLIKDES 256 (288)
T ss_pred CCcchhhhhHHHHHHHHHHhCCCCchhcchHH------HHHhhhcCCCCCcCCCcCCCccCHH---HHHHHHHHccCChh
Confidence 35678999999999999999999975321100 0000000 011111111112233 34889999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||++.||.
T Consensus 257 ~Rpt~~~i~ 265 (288)
T cd06616 257 KRPKYKELL 265 (288)
T ss_pred hCcCHHHHh
Confidence 999999873
No 179
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.41 E-value=7.5e-05 Score=75.02 Aligned_cols=78 Identities=24% Similarity=0.362 Sum_probs=52.3
Q ss_pred eeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccC-CCCChhHHHHHHHHHHHHHHhc
Q 010041 427 GKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLS-PPVNQKIVQDIILVSTIAFACL 505 (519)
Q Consensus 427 ~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~la~~C~ 505 (519)
+++......++.||+||+|++++|+++|+.|... .++. .++ -.++. +.......+++. .+.-.|+
T Consensus 482 PEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~--------~P~~--~ei-~~~i~~~~~s~~vS~~AK---dLl~~LL 547 (612)
T KOG0603|consen 482 PEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAA--------HPAG--IEI-HTRIQMPKFSECVSDEAK---DLLQQLL 547 (612)
T ss_pred hhhhccCCCCcchhhHHHHHHHHHHHhCCCcccc--------CCch--HHH-HHhhcCCccccccCHHHH---HHHHHhc
Confidence 3334455678899999999999999999999863 2222 111 12222 111122223444 7788999
Q ss_pred CCCCCCCCCcccC
Q 010041 506 SSQPKSRPTMQRI 518 (519)
Q Consensus 506 ~~~p~~RP~m~~v 518 (519)
+.+|.+||+|+|+
T Consensus 548 ~~dP~~Rl~~~~i 560 (612)
T KOG0603|consen 548 QVDPALRLGADEI 560 (612)
T ss_pred cCChhhCcChhhh
Confidence 9999999999986
No 180
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.41 E-value=0.00046 Score=57.02 Aligned_cols=123 Identities=18% Similarity=0.256 Sum_probs=56.8
Q ss_pred hhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCC
Q 010041 119 SQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRN 198 (519)
Q Consensus 119 ~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 198 (519)
.+|.++++|+.+.+.. .+...-...|.++++|+.+.+.++ +.......|.++.+|+.+.+.+ .+.......|..+++
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 4677777888888764 455555566777777888888664 5433344566776778887765 333333445666777
Q ss_pred CCEEeccCCcCCCCCCcccCCcCccCeeeCCCCcCCCcCChhhccCCCC
Q 010041 199 LQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSL 247 (519)
Q Consensus 199 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L 247 (519)
|+.+.+..+ +...-...+.++ +++.+.+.. .+.......|.++++|
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 777777654 332223345555 666666654 3333333445554444
No 181
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.41 E-value=6e-05 Score=71.30 Aligned_cols=74 Identities=24% Similarity=0.421 Sum_probs=46.4
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |+.|...... ......+......+.+.....++. ++..+|+..+|++|
T Consensus 184 ~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~P~~R 252 (270)
T cd05056 184 RFTSASDVWMFGVCMWEILMLGVKPFQGVKN--------NDVIGRIENGERLPMPPNCPPTLY---SLMTKCWAYDPSKR 252 (270)
T ss_pred CCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHcCCcCCCCCCCCHHHH---HHHHHHcCCChhhC
Confidence 34678999999999999885 9998643211 001111111111111222233444 78999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.|+
T Consensus 253 pt~~~~ 258 (270)
T cd05056 253 PRFTEL 258 (270)
T ss_pred cCHHHH
Confidence 999875
No 182
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.39 E-value=4.6e-05 Score=74.96 Aligned_cols=76 Identities=24% Similarity=0.364 Sum_probs=47.3
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |..|...... .......+........+....++ +.+++..|++.+|++|
T Consensus 257 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~cl~~~p~~R 326 (343)
T cd05103 257 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLKEGTRMRAPDYTTPE---MYQTMLDCWHGEPSQR 326 (343)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCCccc-------cHHHHHHHhccCCCCCCCCCCHH---HHHHHHHHccCChhhC
Confidence 45678999999999999996 8888653210 01111112111111111111223 4488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 327 ps~~eil 333 (343)
T cd05103 327 PTFSELV 333 (343)
T ss_pred cCHHHHH
Confidence 9999873
No 183
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.39 E-value=7.1e-05 Score=72.77 Aligned_cols=75 Identities=19% Similarity=0.337 Sum_probs=46.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|....... ....................++ +..++.+|++.+|.+||
T Consensus 200 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~p~~Rp 269 (317)
T cd06635 200 QYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNESPTLQSNEWSDY---FRNFVDSCLQKIPQDRP 269 (317)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHHhccCCCCCCccccHH---HHHHHHHHccCCcccCc
Confidence 3567899999999999999999986432110 0011111111111111112223 34788999999999999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
++.||
T Consensus 270 t~~~i 274 (317)
T cd06635 270 TSEEL 274 (317)
T ss_pred CHHHH
Confidence 99886
No 184
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.39 E-value=5.5e-05 Score=72.73 Aligned_cols=76 Identities=17% Similarity=0.266 Sum_probs=46.1
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+|+||++++|+++|+.|........ .............+.+...... +..+..+|+..+|++||+
T Consensus 193 ~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~p~~Rpt 263 (296)
T cd06654 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNGTPELQNPEKLSAI---FRDFLNRCLDMDVEKRGS 263 (296)
T ss_pred CCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcCCCCCCCCccccCHH---HHHHHHHHCcCCcccCcC
Confidence 4578999999999999999999975321100 0000000100000111111223 337889999999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
+.||.
T Consensus 264 ~~eil 268 (296)
T cd06654 264 AKELL 268 (296)
T ss_pred HHHHh
Confidence 98863
No 185
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.39 E-value=7.4e-05 Score=70.72 Aligned_cols=74 Identities=20% Similarity=0.356 Sum_probs=46.6
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC--ChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV--NQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.++|+||||++++|+++|+.|...... ......... ...+.. .....+++. .+..+|+..+|++|
T Consensus 195 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~---~li~~~l~~dp~~R 263 (275)
T cd06608 195 YDARSDVWSLGITAIELADGKPPLCDMHP-------MRALFKIPR-NPPPTLKSPENWSKKFN---DFISECLIKNYEQR 263 (275)
T ss_pred ccccccHHHhHHHHHHHHhCCCCccccch-------HHHHHHhhc-cCCCCCCchhhcCHHHH---HHHHHHhhcChhhC
Confidence 45689999999999999999999753211 001111111 001010 111223343 78999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
||+.||+
T Consensus 264 pt~~~ll 270 (275)
T cd06608 264 PFMEELL 270 (275)
T ss_pred cCHHHHh
Confidence 9999874
No 186
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=97.39 E-value=5.2e-05 Score=75.74 Aligned_cols=78 Identities=23% Similarity=0.379 Sum_probs=56.2
Q ss_pred ecceeccccccccchhhhhcccc-cCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010041 430 AHTMVVTEKCDVYSFGVVALEIL-MGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 430 ~~~~~~~~~~dv~sfg~~~le~l-~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
....+++..+|||=||+.+||++ .|..|...... ..+...+.++-+.+.++.++..+. .++-.||+.+
T Consensus 564 INfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN--------sDVI~~iEnGeRlP~P~nCPp~LY---slmskcWaye 632 (974)
T KOG4257|consen 564 INFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN--------SDVIGHIENGERLPCPPNCPPALY---SLMSKCWAYE 632 (974)
T ss_pred cchhcccchhhHHHHHHHHHHHHHhcCCccccccc--------cceEEEecCCCCCCCCCCCChHHH---HHHHHHhccC
Confidence 34567889999999999999998 59999875321 111122333444455666665555 8899999999
Q ss_pred CCCCCCcccC
Q 010041 509 PKSRPTMQRI 518 (519)
Q Consensus 509 p~~RP~m~~v 518 (519)
|.+||++.|+
T Consensus 633 P~kRPrftei 642 (974)
T KOG4257|consen 633 PSKRPRFTEI 642 (974)
T ss_pred cccCCcHHHH
Confidence 9999999875
No 187
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.38 E-value=6.1e-05 Score=71.67 Aligned_cols=74 Identities=27% Similarity=0.483 Sum_probs=47.1
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|.+.... ....+.+......+.+.....+ +..+...|+..+|++|
T Consensus 187 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~p~~R 255 (279)
T cd05057 187 IYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLEKGERLPQPPICTID---VYMVLVKCWMIDAESR 255 (279)
T ss_pred CcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHcCCChhhC
Confidence 45678999999999999998 9999753211 0111122111111111111223 4488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.++
T Consensus 256 p~~~~l 261 (279)
T cd05057 256 PTFKEL 261 (279)
T ss_pred CCHHHH
Confidence 999875
No 188
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.38 E-value=7.1e-05 Score=70.15 Aligned_cols=75 Identities=20% Similarity=0.415 Sum_probs=46.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|.+... .............. +......+++. .+...|++.+|++||
T Consensus 177 ~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~---~~i~~~l~~~p~~R~ 245 (256)
T cd08221 177 KYNFKSDIWALGCVLYELLTLKRTFDATN-------PLNLVVKIVQGNYT-PVVSVYSSELI---SLVHSLLQQDPEKRP 245 (256)
T ss_pred CCCCcchhHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHcCCCC-CCccccCHHHH---HHHHHHcccCcccCC
Confidence 34568999999999999999999865211 00001111111111 11111223333 788899999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.|+.
T Consensus 246 s~~~ll 251 (256)
T cd08221 246 TADEVL 251 (256)
T ss_pred CHHHHh
Confidence 999863
No 189
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.38 E-value=8.3e-05 Score=71.22 Aligned_cols=73 Identities=22% Similarity=0.423 Sum_probs=46.3
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC--CChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP--VNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.++|+||||++++|+++|+.|....... ....+.. ...... .+.....+ +..++..|++.+|++|
T Consensus 210 ~~~~~Di~slGvi~~el~~g~~p~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~---l~~li~~~l~~~p~~R 278 (291)
T cd06639 210 YDARCDVWSLGITAIELGDGDPPLFDMHPV-------KTLFKIP-RNPPPTLLHPEKWCRS---FNHFISQCLIKDFEAR 278 (291)
T ss_pred cCCccchHHHHHHHHHHhhCCCCCCCCcHH-------HHHHHHh-cCCCCCCCcccccCHH---HHHHHHHHhhcChhhC
Confidence 467899999999999999999997532211 0000110 000000 01111123 4488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.|+
T Consensus 279 ps~~~i 284 (291)
T cd06639 279 PSVTHL 284 (291)
T ss_pred cCHHHH
Confidence 999986
No 190
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.38 E-value=0.0001 Score=69.52 Aligned_cols=76 Identities=25% Similarity=0.467 Sum_probs=47.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhh---hccCCCCC-hhHHHHHHHHHHHHHHhcCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVN-QKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~-~~~~~~~~~~~~la~~C~~~~p 509 (519)
..+.++|+||||++++|+++|+.|........ ...+.+. +....... ....+++ ..+...|++.+|
T Consensus 183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p 252 (267)
T cd06610 183 GYDFKADIWSFGITAIELATGAAPYSKYPPMK-------VLMLTLQNDPPSLETGADYKKYSKSF---RKMISLCLQKDP 252 (267)
T ss_pred CcCcccchHhHhHHHHHHHhCCCCccccChhh-------hHHHHhcCCCCCcCCccccccccHHH---HHHHHHHcCCCh
Confidence 35678999999999999999999975322110 0111111 11111100 1112333 388999999999
Q ss_pred CCCCCcccCC
Q 010041 510 KSRPTMQRIS 519 (519)
Q Consensus 510 ~~RP~m~~v~ 519 (519)
++||++.||+
T Consensus 253 ~~Rp~~~~ll 262 (267)
T cd06610 253 SKRPTAEELL 262 (267)
T ss_pred hhCcCHHHHh
Confidence 9999999874
No 191
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.37 E-value=9.4e-05 Score=71.08 Aligned_cols=78 Identities=24% Similarity=0.355 Sum_probs=45.0
Q ss_pred eccccccccchhhhhccccc--CCCCcccccccccCCCCCcchhhhhh---hccCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM--GRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~--g~~p~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
..+.+.|+||||++++|+++ |..|........ .... ...... .....+.+...... +.+++.+|++.+
T Consensus 208 ~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~ 280 (296)
T cd05095 208 KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ--VIEN--TGEFFRDQGRQVYLPKPALCPDS---LYKLMLSCWRRN 280 (296)
T ss_pred CccchhhhhHHHHHHHHHHHhCCCCCccccChHH--HHHH--HHHHHhhccccccCCCCCCCCHH---HHHHHHHHcCCC
Confidence 35668999999999999998 666654221100 0000 000000 00000111112233 448999999999
Q ss_pred CCCCCCcccC
Q 010041 509 PKSRPTMQRI 518 (519)
Q Consensus 509 p~~RP~m~~v 518 (519)
|++||+|.||
T Consensus 281 p~~Rp~~~~i 290 (296)
T cd05095 281 AKERPSFQEI 290 (296)
T ss_pred cccCCCHHHH
Confidence 9999999987
No 192
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.36 E-value=6.7e-05 Score=70.57 Aligned_cols=78 Identities=21% Similarity=0.373 Sum_probs=48.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChh-HHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQK-IVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+|+||++++|+++|+.|...... .........+........+.. ..+.+ .++...|++.+|++|
T Consensus 176 ~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~li~~~l~~~p~~R 247 (264)
T cd06623 176 SYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDGPPPSLPAEEFSPEF---RDFISACLQKDPKKR 247 (264)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcCCCCCCCcccCCHHH---HHHHHHHccCChhhC
Confidence 456789999999999999999999764321 000011111111111112221 22333 388999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.|++
T Consensus 248 ~~~~~ll 254 (264)
T cd06623 248 PSAAELL 254 (264)
T ss_pred CCHHHHH
Confidence 9999873
No 193
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.36 E-value=6.5e-05 Score=70.47 Aligned_cols=74 Identities=28% Similarity=0.508 Sum_probs=47.0
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||+|++++|+++ |+.|...... ....+.+........+.....++ ..+...|++.+|++|
T Consensus 183 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~R 251 (262)
T cd00192 183 IFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRKGYRLPKPEYCPDEL---YELMLSCWQLDPEDR 251 (262)
T ss_pred CcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCccCChHH---HHHHHHHccCCcccC
Confidence 45678999999999999998 5888753211 11111111111111122222333 488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.|+
T Consensus 252 ps~~~l 257 (262)
T cd00192 252 PTFSEL 257 (262)
T ss_pred cCHHHH
Confidence 999886
No 194
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.36 E-value=9.2e-05 Score=71.64 Aligned_cols=74 Identities=19% Similarity=0.331 Sum_probs=46.0
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||||++++|+++|+.|....... .....................+ +..+..+|++.+|++||+
T Consensus 191 ~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~P~~Rp~ 260 (308)
T cd06634 191 YDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNESPALQSGHWSEY---FRNFVDSCLQKIPQDRPT 260 (308)
T ss_pred CCcccchHHHHHHHHHHHcCCCCCccccHH-------HHHHHHhhcCCCCcCcccccHH---HHHHHHHHhhCCcccCCC
Confidence 456899999999999999999996432110 0001111111111111111223 347899999999999999
Q ss_pred cccC
Q 010041 515 MQRI 518 (519)
Q Consensus 515 m~~v 518 (519)
+.||
T Consensus 261 ~~~l 264 (308)
T cd06634 261 SEVL 264 (308)
T ss_pred HHHH
Confidence 9886
No 195
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.36 E-value=8.8e-05 Score=70.44 Aligned_cols=74 Identities=19% Similarity=0.407 Sum_probs=46.2
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCCh-hHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQ-KIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.+.|+||||++++++++|+.|......... .........+.... ....+ +..++.+|++.+|++||
T Consensus 179 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~i~~~l~~~p~~R~ 247 (277)
T cd06917 179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRA--------MMLIPKSKPPRLEDNGYSKL---LREFVAACLDEEPKERL 247 (277)
T ss_pred cccchhHHHHHHHHHHHHhCCCCCCCCChhhh--------hhccccCCCCCCCcccCCHH---HHHHHHHHcCCCcccCc
Confidence 45689999999999999999999753221100 00000000111111 11223 34788999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.|+.
T Consensus 248 ~~~~il 253 (277)
T cd06917 248 SAEELL 253 (277)
T ss_pred CHHHHh
Confidence 998863
No 196
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.35 E-value=7.6e-05 Score=70.36 Aligned_cols=75 Identities=20% Similarity=0.410 Sum_probs=47.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhh-ccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++|+.|........ ........ ...++.+....+++. .+..+|++.+|++|
T Consensus 184 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~R 253 (265)
T cd06631 184 GYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-------AMFYIGAHRGLMPRLPDSFSAAAI---DFVTSCLTRDQHER 253 (265)
T ss_pred CCcchhhHHHHHHHHHHHHhCCCccccCChHH-------HHHHhhhccCCCCCCCCCCCHHHH---HHHHHHhcCCcccC
Confidence 34578999999999999999999975322110 00000000 111122222233443 78999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 254 p~~~~~ 259 (265)
T cd06631 254 PSALQL 259 (265)
T ss_pred CCHHHH
Confidence 999987
No 197
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.35 E-value=6.7e-05 Score=71.78 Aligned_cols=80 Identities=23% Similarity=0.292 Sum_probs=48.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhh----ccCCCCC--hhHHHHHHHHHHHHHHhcCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQ----RLSPPVN--QKIVQDIILVSTIAFACLSS 507 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~--~~~~~~~~~~~~la~~C~~~ 507 (519)
..+.++|+|++|++++|+++|+.|.+.... .........+.+.. .+..... ....++ +..+..+|++.
T Consensus 179 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~ 252 (287)
T cd06621 179 PYSITSDVWSLGLTLLEVAQNRFPFPPEGE---PPLGPIELLSYIVNMPNPELKDEPGNGIKWSEE---FKDFIKQCLEK 252 (287)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCcccC---CCCChHHHHHHHhcCCchhhccCCCCCCchHHH---HHHHHHHHcCC
Confidence 346689999999999999999999764311 00000011111111 1111101 111223 44889999999
Q ss_pred CCCCCCCcccCC
Q 010041 508 QPKSRPTMQRIS 519 (519)
Q Consensus 508 ~p~~RP~m~~v~ 519 (519)
+|++||||.||+
T Consensus 253 ~p~~Rpt~~eil 264 (287)
T cd06621 253 DPTRRPTPWDML 264 (287)
T ss_pred CcccCCCHHHHH
Confidence 999999999873
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.35 E-value=7.3e-05 Score=71.26 Aligned_cols=75 Identities=17% Similarity=0.266 Sum_probs=46.7
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhh-ccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.++|+||||++++|+++|+.|....... ......... ......+.....++. ++...|++.+|++||
T Consensus 185 ~~~~~Dv~slGvil~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~Rp 254 (282)
T cd06643 185 YDYKADVWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSEPPTLAQPSRWSSEFK---DFLKKCLEKNVDARW 254 (282)
T ss_pred CCccchhhhHHHHHHHHccCCCCccccCHH-------HHHHHHhhcCCCCCCCccccCHHHH---HHHHHHccCChhhCc
Confidence 456899999999999999999997532211 000011000 000011112223444 788999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.||.
T Consensus 255 ~~~~il 260 (282)
T cd06643 255 TTTQLL 260 (282)
T ss_pred CHHHHh
Confidence 998863
No 199
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.35 E-value=7.3e-05 Score=71.79 Aligned_cols=74 Identities=28% Similarity=0.479 Sum_probs=44.9
Q ss_pred eccccccccchhhhhccccc--CCCCcccccccccCCCCCcchhhhhh-------hccCCCCChhHHHHHHHHHHHHHHh
Q 010041 434 VVTEKCDVYSFGVVALEILM--GRHPGELLSSLSSSSGPKIMLINVLD-------QRLSPPVNQKIVQDIILVSTIAFAC 504 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~--g~~p~~~~~~~~~~~~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~la~~C 504 (519)
..+.++|+||||++++|+++ |..|...... ........ .....+.+....++ +.+++..|
T Consensus 208 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~c 276 (296)
T cd05051 208 KFTTKSDVWAFGVTLWEILTLCREQPYEHLTD--------QQVIENAGHFFRDDGRQIYLPRPPNCPKD---IYELMLEC 276 (296)
T ss_pred CCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--------HHHHHHHHhccccccccccCCCccCCCHH---HHHHHHHH
Confidence 45678999999999999987 5566542110 00000000 00000111111233 44899999
Q ss_pred cCCCCCCCCCcccC
Q 010041 505 LSSQPKSRPTMQRI 518 (519)
Q Consensus 505 ~~~~p~~RP~m~~v 518 (519)
++.+|++||+|.||
T Consensus 277 l~~~p~~Rpt~~el 290 (296)
T cd05051 277 WRRDEEDRPTFREI 290 (296)
T ss_pred hccChhcCCCHHHH
Confidence 99999999999986
No 200
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.34 E-value=8.6e-05 Score=70.76 Aligned_cols=76 Identities=18% Similarity=0.282 Sum_probs=46.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|........ ...................++ +.++...|++.+|.+||
T Consensus 202 ~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~---~~~li~~cl~~~p~~Rp 271 (282)
T cd06636 202 TYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR-------ALFLIPRNPPPKLKSKKWSKK---FIDFIEGCLVKNYLSRP 271 (282)
T ss_pred CCCcccchhHHHHHHHHHHhCCCCccccCHHh-------hhhhHhhCCCCCCcccccCHH---HHHHHHHHhCCChhhCc
Confidence 34568999999999999999999975321110 000000000000001112233 34789999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.|+.
T Consensus 272 ~~~ell 277 (282)
T cd06636 272 STEQLL 277 (282)
T ss_pred CHHHHh
Confidence 998863
No 201
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.33 E-value=6.6e-05 Score=72.11 Aligned_cols=79 Identities=24% Similarity=0.318 Sum_probs=44.8
Q ss_pred eccccccccchhhhhccccc--CCCCcccccccccCCCCCcchhhhhh---hccCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM--GRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~--g~~p~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
..+.+.|+||||++++|+++ |..|........ ... ...+..+ .......+....+. +.+++.+|++.+
T Consensus 207 ~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~ 279 (295)
T cd05097 207 KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ--VIE--NTGEFFRNQGRQIYLSQTPLCPSP---VFKLMMRCWSRD 279 (295)
T ss_pred CcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH--HHH--HHHHhhhhccccccCCCCCCCCHH---HHHHHHHHcCCC
Confidence 45678999999999999987 445543211000 000 0000000 00000111111233 448999999999
Q ss_pred CCCCCCcccCC
Q 010041 509 PKSRPTMQRIS 519 (519)
Q Consensus 509 p~~RP~m~~v~ 519 (519)
|++||+|.+|+
T Consensus 280 p~~RPs~~~i~ 290 (295)
T cd05097 280 IKDRPTFNKIH 290 (295)
T ss_pred chhCcCHHHHH
Confidence 99999999873
No 202
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=97.33 E-value=0.00012 Score=75.55 Aligned_cols=74 Identities=27% Similarity=0.453 Sum_probs=52.4
Q ss_pred ceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhh--hhccCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL--DQRLSPPVNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~--d~~~~~~~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
....+.+.|||+|||..||++| |..|++.+... .+-+.+ ..|++ .++.+..+++ .++..||..+
T Consensus 874 ~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--------eI~dlle~geRLs--qPpiCtiDVy---~~mvkCwmid 940 (1177)
T KOG1025|consen 874 IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--------EIPDLLEKGERLS--QPPICTIDVY---MVMVKCWMID 940 (1177)
T ss_pred ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--------HhhHHHhccccCC--CCCCccHHHH---HHHHHHhccC
Confidence 4457789999999999999986 99998754311 112222 22333 3444555666 8899999999
Q ss_pred CCCCCCcccC
Q 010041 509 PKSRPTMQRI 518 (519)
Q Consensus 509 p~~RP~m~~v 518 (519)
++.||++++.
T Consensus 941 ~~~rp~fkel 950 (1177)
T KOG1025|consen 941 ADSRPTFKEL 950 (1177)
T ss_pred cccCccHHHH
Confidence 9999999874
No 203
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.32 E-value=5.7e-05 Score=71.30 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=45.8
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||||++++|+++|+.|.......... ..........+.... ......+ +.++...|++.+|++||+
T Consensus 186 ~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~---~~~li~~~l~~~P~~Rp~ 258 (267)
T cd06646 186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--FLMSKSNFQPPKLKD--KTKWSST---FHNFVKISLTKNPKKRPT 258 (267)
T ss_pred CcchhhHHHHHHHHHHHHhCCCCccccchhhhh--eeeecCCCCCCCCcc--ccccCHH---HHHHHHHHhhCChhhCcC
Confidence 456899999999999999999987432211000 000000000001100 0111123 348899999999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
+++|.
T Consensus 259 ~~~il 263 (267)
T cd06646 259 AERLL 263 (267)
T ss_pred HHHHh
Confidence 99863
No 204
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.30 E-value=9.1e-05 Score=69.41 Aligned_cols=75 Identities=21% Similarity=0.453 Sum_probs=46.9
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+|+||++++++++|+.|....... ..........-.+..+....+++. ++..+|++.+|++||+
T Consensus 179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~Rp~ 248 (258)
T cd06632 179 YGLAADIWSLGCTVLEMATGKPPWSQLEGV-------AAVFKIGRSKELPPIPDHLSDEAK---DFILKCLQRDPSLRPT 248 (258)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCcccCcHH-------HHHHHHHhcccCCCcCCCcCHHHH---HHHHHHhhcCcccCcC
Confidence 567899999999999999999997532210 000011110001111122223343 7788999999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
|.|++
T Consensus 249 ~~~~l 253 (258)
T cd06632 249 AAELL 253 (258)
T ss_pred HHHHh
Confidence 99874
No 205
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.29 E-value=0.00011 Score=70.17 Aligned_cols=82 Identities=23% Similarity=0.303 Sum_probs=46.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccc-cccCC---CCCcc---hhhhhhhccCCCCChhHHHHHHHHHHHHHHhcC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSS-LSSSS---GPKIM---LINVLDQRLSPPVNQKIVQDIILVSTIAFACLS 506 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~-~~~~~---~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~ 506 (519)
..+.+.|+||||++++|+++++.|...-.. ..... ..... ....+......+......++ +.+++.+|++
T Consensus 188 ~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~ 264 (284)
T cd05079 188 KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEE---VYQLMRKCWE 264 (284)
T ss_pred CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHH---HHHHHHHHcc
Confidence 355789999999999999998876532110 00000 00101 11111111111111112233 4489999999
Q ss_pred CCCCCCCCcccC
Q 010041 507 SQPKSRPTMQRI 518 (519)
Q Consensus 507 ~~p~~RP~m~~v 518 (519)
.+|++||+++||
T Consensus 265 ~~p~~Rpt~~~i 276 (284)
T cd05079 265 FQPSKRTTFQNL 276 (284)
T ss_pred CCcccCcCHHHH
Confidence 999999999986
No 206
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.29 E-value=0.0002 Score=68.15 Aligned_cols=86 Identities=17% Similarity=0.164 Sum_probs=46.9
Q ss_pred eccccccccchhhhhcccccCCCCccccccc----------ccCC---CCCc-chhhhhhhccCCCCChhH----HHHHH
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSL----------SSSS---GPKI-MLINVLDQRLSPPVNQKI----VQDII 495 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~----------~~~~---~~~~-~~~~~~d~~~~~~~~~~~----~~~~~ 495 (519)
..+.++|+||||++++|+++|+.|....... .... .... ...+..+........... .....
T Consensus 175 ~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (283)
T cd07830 175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASP 254 (283)
T ss_pred CcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCH
Confidence 3567899999999999999999876421100 0000 0000 000000101000000000 00112
Q ss_pred HHHHHHHHhcCCCCCCCCCcccCC
Q 010041 496 LVSTIAFACLSSQPKSRPTMQRIS 519 (519)
Q Consensus 496 ~~~~la~~C~~~~p~~RP~m~~v~ 519 (519)
.+..+...|++.+|++||+++||+
T Consensus 255 ~~~~li~~cl~~~p~~Rpt~~ei~ 278 (283)
T cd07830 255 EAIDLIKDMLRWDPKKRPTASQAL 278 (283)
T ss_pred HHHHHHHHhcccCcccCCCHHHHh
Confidence 355899999999999999999874
No 207
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.29 E-value=0.00011 Score=70.23 Aligned_cols=74 Identities=23% Similarity=0.442 Sum_probs=46.3
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC--CChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP--VNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.++|+||+|++++|+++|+.|........ .... ........ .+....++ +..+..+|++.+|++|
T Consensus 206 ~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~R 274 (286)
T cd06638 206 YDARCDVWSLGITAIELGDGDPPLADLHPMR-------ALFK-IPRNPPPTLHQPELWSNE---FNDFIRKCLTKDYEKR 274 (286)
T ss_pred ccchhhhhhHHHHHHHHhcCCCCCCCCchhH-------HHhh-ccccCCCcccCCCCcCHH---HHHHHHHHccCCcccC
Confidence 4678999999999999999999975322110 0000 00000000 01111123 3388999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.||+
T Consensus 275 ps~~ell 281 (286)
T cd06638 275 PTVSDLL 281 (286)
T ss_pred CCHHHHh
Confidence 9999874
No 208
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.29 E-value=0.0001 Score=70.49 Aligned_cols=26 Identities=15% Similarity=0.217 Sum_probs=22.7
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 185 ~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 185 SYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred CCCCccchHHHHHHHHHHHcCCCCcC
Confidence 34568999999999999999999875
No 209
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.29 E-value=9.1e-05 Score=70.76 Aligned_cols=76 Identities=22% Similarity=0.413 Sum_probs=47.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCC-hhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVN-QKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+|+||++++++++|+.|........ ............... .....++ .++..+|++.+|.+|
T Consensus 192 ~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l---~~li~~~l~~~p~~R 261 (286)
T cd06614 192 DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-------ALFLITTKGIPPLKNPEKWSPEF---KDFLNKCLVKDPEKR 261 (286)
T ss_pred CCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhcCCCCCcchhhCCHHH---HHHHHHHhccChhhC
Confidence 34678999999999999999999965321110 000111111111001 1122333 388999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.||.
T Consensus 262 pt~~~il 268 (286)
T cd06614 262 PSAEELL 268 (286)
T ss_pred cCHHHHh
Confidence 9999873
No 210
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=97.28 E-value=9.3e-05 Score=69.54 Aligned_cols=73 Identities=19% Similarity=0.304 Sum_probs=46.4
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.+.|+|+||++++++++|+.|...... ............+..+.....++. .+..+|++.+|++||+
T Consensus 182 ~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~Rp~ 250 (260)
T cd08222 182 YDSKSDIWSLGCILYEMCCLAHAFEGQNF--------LSVVLRIVEGPTPSLPETYSRQLN---SIMQSMLNKDPSLRPS 250 (260)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCCCCCCcchhcHHHH---HHHHHHhcCChhhCcC
Confidence 45679999999999999999998642110 001111111111122222223443 7889999999999999
Q ss_pred cccC
Q 010041 515 MQRI 518 (519)
Q Consensus 515 m~~v 518 (519)
+.||
T Consensus 251 ~~~i 254 (260)
T cd08222 251 AAEI 254 (260)
T ss_pred HHHH
Confidence 9886
No 211
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.28 E-value=6.9e-05 Score=77.24 Aligned_cols=75 Identities=25% Similarity=0.364 Sum_probs=47.4
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
...+.++|+||||++++|+++|+.|...... ............. +.+.....++. ++...|++.+|++|
T Consensus 246 ~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-------~~~~~~~~~~~~~-~~~~~~s~~~~---~li~~~L~~dP~~R 314 (478)
T PTZ00267 246 KRYSKKADMWSLGVILYELLTLHRPFKGPSQ-------REIMQQVLYGKYD-PFPCPVSSGMK---ALLDPLLSKNPALR 314 (478)
T ss_pred CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC-CCCccCCHHHH---HHHHHHhccChhhC
Confidence 3456789999999999999999999752110 0001111111111 11112223444 78899999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.|+
T Consensus 315 ps~~~~ 320 (478)
T PTZ00267 315 PTTQQL 320 (478)
T ss_pred cCHHHH
Confidence 999876
No 212
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.28 E-value=0.00011 Score=72.00 Aligned_cols=26 Identities=27% Similarity=0.529 Sum_probs=23.1
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 178 ~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 178 HYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred CCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 45678999999999999999999974
No 213
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.28 E-value=0.0001 Score=69.72 Aligned_cols=75 Identities=25% Similarity=0.523 Sum_probs=46.3
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCCh----hHHHHHHHHHHHHHHhcCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQ----KIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~~~~la~~C~~~~p~ 510 (519)
.+.++|+||+|++++|+++|+.|........ ...+..........+. ....+ +..+...|++.+|+
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~ 258 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-------AMFKLGNKRSAPPIPPDVSMNLSPV---ALDFLNACFTINPD 258 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcCcchHH-------HHHHhhccccCCcCCccccccCCHH---HHHHHHHHhcCChh
Confidence 4678999999999999999999974221100 0001000111111111 11223 33778999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||+|.||+
T Consensus 259 ~Rps~~~il 267 (272)
T cd06629 259 NRPTARELL 267 (272)
T ss_pred hCCCHHHHh
Confidence 999999874
No 214
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.27 E-value=9.8e-05 Score=69.55 Aligned_cols=77 Identities=22% Similarity=0.426 Sum_probs=47.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhcc---CCCCChh-HHHHHHHHHHHHHHhcCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRL---SPPVNQK-IVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~-~~~~~~~~~~la~~C~~~~p 509 (519)
..+.++|+||||++++++++|+.|...... ......+.+.... .+..+.. ...+ +.++...|+..+|
T Consensus 175 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p 245 (265)
T cd06605 175 DYSVKSDIWSLGLSLIELATGRFPYPPEND------PPDGIFELLQYIVNEPPPRLPSGKFSPD---FQDFVNLCLIKDP 245 (265)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCcccc------ccccHHHHHHHHhcCCCCCCChhhcCHH---HHHHHHHHcCCCc
Confidence 456789999999999999999999753211 0011111111111 1111111 2233 3488899999999
Q ss_pred CCCCCcccCC
Q 010041 510 KSRPTMQRIS 519 (519)
Q Consensus 510 ~~RP~m~~v~ 519 (519)
++||++.|++
T Consensus 246 ~~Rpt~~~ll 255 (265)
T cd06605 246 RERPSYKELL 255 (265)
T ss_pred hhCcCHHHHh
Confidence 9999998863
No 215
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.27 E-value=0.00012 Score=69.90 Aligned_cols=76 Identities=26% Similarity=0.395 Sum_probs=47.0
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||||++++|+++|+.|....... ..........+ ...+..+....+++. .+..+|++.+|++||+
T Consensus 184 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~---~li~~~l~~~p~~Rp~ 255 (286)
T cd06622 184 YTVQSDVWSLGLSILEMALGRYPYPPETYA----NIFAQLSAIVD-GDPPTLPSGYSDDAQ---DFVAKCLNKIPNRRPT 255 (286)
T ss_pred CCcccchHhHHHHHHHHHhCCCCCCCcchh----hHHHHHHHHhh-cCCCCCCcccCHHHH---HHHHHHcccCcccCCC
Confidence 467899999999999999999997531100 00000011111 111122222233444 7889999999999999
Q ss_pred cccC
Q 010041 515 MQRI 518 (519)
Q Consensus 515 m~~v 518 (519)
+.|+
T Consensus 256 ~~~l 259 (286)
T cd06622 256 YAQL 259 (286)
T ss_pred HHHH
Confidence 9886
No 216
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.27 E-value=0.00013 Score=69.29 Aligned_cols=73 Identities=19% Similarity=0.411 Sum_probs=47.3
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 516 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 516 (519)
.+.|+||+|++++|++||+.|..... ...............+..+....++.. ..-..|.+.+|+.|||+.
T Consensus 201 ~~sDiWSlGCtVvEM~Tg~~PW~~~~------~~~~~~~~ig~~~~~P~ip~~ls~~a~---~Fl~~C~~~~p~~Rpta~ 271 (313)
T KOG0198|consen 201 RESDIWSLGCTVVEMLTGKPPWSEFF------EEAEALLLIGREDSLPEIPDSLSDEAK---DFLRKCFKRDPEKRPTAE 271 (313)
T ss_pred ccchhhhcCCEEEeccCCCCcchhhc------chHHHHHHHhccCCCCCCCcccCHHHH---HHHHHHhhcCcccCcCHH
Confidence 38999999999999999999976420 000001111111112233333445555 778999999999999998
Q ss_pred cC
Q 010041 517 RI 518 (519)
Q Consensus 517 ~v 518 (519)
|.
T Consensus 272 eL 273 (313)
T KOG0198|consen 272 EL 273 (313)
T ss_pred HH
Confidence 74
No 217
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.26 E-value=7.2e-05 Score=72.20 Aligned_cols=79 Identities=23% Similarity=0.285 Sum_probs=44.6
Q ss_pred eccccccccchhhhhccccc--CCCCcccccccccCCCCCcchhhhhhhc---cCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM--GRHPGELLSSLSSSSGPKIMLINVLDQR---LSPPVNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~--g~~p~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
..+.+.|+||||++++|+++ +..|........ ... ...+..... .....+....+++ .+++.+|++.+
T Consensus 216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~cl~~~ 288 (304)
T cd05096 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQ--VIE--NAGEFFRDQGRQVYLFRPPPCPQGL---YELMLQCWSRD 288 (304)
T ss_pred CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHH--HHH--HHHHHhhhccccccccCCCCCCHHH---HHHHHHHccCC
Confidence 45678999999999999886 445554221100 000 000000000 0000111122344 38899999999
Q ss_pred CCCCCCcccCC
Q 010041 509 PKSRPTMQRIS 519 (519)
Q Consensus 509 p~~RP~m~~v~ 519 (519)
|++||||.||+
T Consensus 289 p~~RPs~~~i~ 299 (304)
T cd05096 289 CRERPSFSDIH 299 (304)
T ss_pred chhCcCHHHHH
Confidence 99999999873
No 218
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.26 E-value=8.5e-05 Score=71.39 Aligned_cols=76 Identities=21% Similarity=0.406 Sum_probs=46.7
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC-CCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.++|+||||++++|+++|+.|......- ...+....+..... +......+++ ..+..+|++.+|++||
T Consensus 195 ~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l---~~li~~~l~~~p~~Rp 265 (296)
T cd06618 195 YDIRADVWSLGISLVELATGQFPYKNCKTE------FEVLTKILQEEPPSLPPNEGFSPDF---CSFVDLCLTKDHRKRP 265 (296)
T ss_pred cccchhHHHHHHHHHHHHhCCCCCCcchhH------HHHHHHHhcCCCCCCCCCCCCCHHH---HHHHHHHccCChhhCC
Confidence 456899999999999999999997531100 00011111111100 0011112333 4788999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.||.
T Consensus 266 ~~~~il 271 (296)
T cd06618 266 KYRELL 271 (296)
T ss_pred CHHHHh
Confidence 998873
No 219
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.25 E-value=7.1e-05 Score=71.64 Aligned_cols=74 Identities=32% Similarity=0.435 Sum_probs=45.6
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++ |+.|...... ........+.... ..+....++ +.+++.+|++.+|++|
T Consensus 197 ~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~---~~~li~~~l~~~p~~R 265 (288)
T cd05061 197 VFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------EQVLKFVMDGGYL-DQPDNCPER---VTDLMRMCWQFNPKMR 265 (288)
T ss_pred CCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCC-CCCCCCCHH---HHHHHHHHcCCChhHC
Confidence 45678999999999999998 6777542110 0001111111111 111112233 4488999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.|+
T Consensus 266 ps~~~l 271 (288)
T cd05061 266 PTFLEI 271 (288)
T ss_pred cCHHHH
Confidence 999886
No 220
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.25 E-value=0.00012 Score=70.01 Aligned_cols=75 Identities=19% Similarity=0.320 Sum_probs=46.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC--ChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV--NQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.+.|+||||++++|+++|+.|....... .....+.....+.. ......+ +..+..+|++.+|++
T Consensus 191 ~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~p~~ 259 (285)
T cd06648 191 PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--------QAMKRIRDNLPPKLKNLHKVSPR---LRSFLDRMLVRDPAQ 259 (285)
T ss_pred CCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHhcCCCCCcccccCCHH---HHHHHHHHcccChhh
Confidence 3457899999999999999999996421100 00011111110000 1111123 448899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||++.|+.
T Consensus 260 Rpt~~~il 267 (285)
T cd06648 260 RATAAELL 267 (285)
T ss_pred CcCHHHHc
Confidence 99998863
No 221
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.24 E-value=0.0001 Score=68.12 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=48.0
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChh--HHHHHHHHHHHHHHhcCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQK--IVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~la~~C~~~~p~ 510 (519)
...+.+.|+|+||++++++++|+.|..... ......+............. ...+ +.+++.+|+..+|+
T Consensus 161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~l~~~p~ 230 (244)
T smart00220 161 KGYGKAVDVWSLGVILYELLTGKPPFPGDD-------QLLELFKKIGKPKPPFPPPEWKISPE---AKDLIRKLLVKDPE 230 (244)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHhccCCCCccccccCCHH---HHHHHHHHccCCch
Confidence 345678999999999999999998875311 00111111111111110000 2233 44889999999999
Q ss_pred CCCCcccCC
Q 010041 511 SRPTMQRIS 519 (519)
Q Consensus 511 ~RP~m~~v~ 519 (519)
+||+|.|++
T Consensus 231 ~Rp~~~~~~ 239 (244)
T smart00220 231 KRLTAEEAL 239 (244)
T ss_pred hccCHHHHh
Confidence 999999874
No 222
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.24 E-value=0.0001 Score=70.00 Aligned_cols=73 Identities=23% Similarity=0.430 Sum_probs=45.9
Q ss_pred eccccccccchhhhhccc-ccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEI-LMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~-l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+ ++|+.|...... .............+ .....+ +..++..|++.+|++|
T Consensus 197 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~--~~~~~~---~~~li~~cl~~~p~~R 263 (274)
T cd05076 197 SLSTAADKWSFGTTLLEICFDGEVPLKERTP--------SEKERFYEKKHRLP--EPSCKE---LATLISQCLTYEPTQR 263 (274)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCccccCh--------HHHHHHHHhccCCC--CCCChH---HHHHHHHHcccChhhC
Confidence 346789999999999998 578888753211 00111112111111 111123 4488999999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|.||+
T Consensus 264 ps~~~il 270 (274)
T cd05076 264 PSFRTIL 270 (274)
T ss_pred cCHHHHH
Confidence 9999873
No 223
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.23 E-value=0.00011 Score=68.53 Aligned_cols=73 Identities=25% Similarity=0.479 Sum_probs=45.8
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCC--hhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVN--QKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.+.|+|+||++++++++|+.|........ .. ............ .....++ .++...|++.+|++|
T Consensus 174 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~---~~~i~~~l~~~p~~R 242 (253)
T cd05122 174 YDYKADIWSLGITAIELAEGKPPYSELPPMK-------AL-FKIATNGPPGLRNPEKWSDEF---KDFLKKCLQKNPEKR 242 (253)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCchHH-------HH-HHHHhcCCCCcCcccccCHHH---HHHHHHHccCChhhC
Confidence 5678999999999999999999975321100 00 000001011111 1012333 378899999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++.||
T Consensus 243 ~t~~~~ 248 (253)
T cd05122 243 PTAEQL 248 (253)
T ss_pred CCHHHH
Confidence 999886
No 224
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=97.23 E-value=0.00044 Score=44.54 Aligned_cols=36 Identities=33% Similarity=0.635 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHhccC-----CCCCCCCCCCCCCCCCCcceeeeC
Q 010041 35 IHVAASEIERQALLN-----SGWWKDRIPQNTSDHCGWVGITCD 73 (519)
Q Consensus 35 ~~~~~~~~~~~~~~~-----~~~w~~~~~~~~~~~C~w~gv~c~ 73 (519)
.+..+++.+|.++.. +..|... ...++|+|.||+|+
T Consensus 3 ~d~~aLl~~k~~l~~~~~~~l~~W~~~---~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 3 QDRQALLAFKKSLNNDPSGVLSSWNPS---SDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHCTT-SC-CCCTT--TT-----S-CCCSTTEEE-
T ss_pred HHHHHHHHHHHhcccccCcccccCCCc---CCCCCeeeccEEeC
Confidence 578899999999873 5678751 12699999999995
No 225
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.22 E-value=0.00011 Score=68.89 Aligned_cols=72 Identities=22% Similarity=0.411 Sum_probs=44.7
Q ss_pred ccccccccchhhhhcccccCC-CCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGR-HPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~-~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.+.|+||||++++|+++|. .|....... ........+.. .+.....+ +..++..|++.+|++||
T Consensus 182 ~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~---~~~li~~~l~~~p~~Rp 248 (258)
T cd05078 182 LSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------KKLQFYEDRHQ--LPAPKWTE---LANLINQCMDYEPDFRP 248 (258)
T ss_pred CCchhhHHHHHHHHHHHHcCCCCChhhccHH--------HHHHHHHcccc--CCCCCcHH---HHHHHHHHhccChhhCC
Confidence 456899999999999999985 554321110 00111111111 11111123 34889999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
||+|++
T Consensus 249 s~~~il 254 (258)
T cd05078 249 SFRAII 254 (258)
T ss_pred CHHHHH
Confidence 999863
No 226
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.22 E-value=8.4e-05 Score=70.28 Aligned_cols=74 Identities=24% Similarity=0.470 Sum_probs=43.2
Q ss_pred ccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhh-h--hccCCC-CChhHHHHHHHHHHHHHHhcCCCC
Q 010041 435 VTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL-D--QRLSPP-VNQKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~-d--~~~~~~-~~~~~~~~~~~~~~la~~C~~~~p 509 (519)
.+.+.|+||||++++|+++ |+.|......- . .....+ . .....+ ......+.+. .+...|+ .+|
T Consensus 186 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~c~-~~P 254 (269)
T cd05087 186 QTKESNVWSLGVTIWELFELGSQPYRHLSDE------Q-VLTYTVREQQLKLPKPRLKLPLSDRWY---EVMQFCW-LQP 254 (269)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCCCCCChH------H-HHHHHhhcccCCCCCCccCCCCChHHH---HHHHHHh-cCc
Confidence 4568999999999999986 99997532110 0 000000 0 011111 1111123333 5677898 579
Q ss_pred CCCCCcccCC
Q 010041 510 KSRPTMQRIS 519 (519)
Q Consensus 510 ~~RP~m~~v~ 519 (519)
++||||+||+
T Consensus 255 ~~Rpt~~~l~ 264 (269)
T cd05087 255 EQRPSAEEVH 264 (269)
T ss_pred ccCCCHHHHH
Confidence 9999999974
No 227
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.22 E-value=0.00012 Score=70.23 Aligned_cols=82 Identities=20% Similarity=0.427 Sum_probs=51.6
Q ss_pred eeeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhc
Q 010041 426 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACL 505 (519)
Q Consensus 426 ~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~ 505 (519)
.+++........|.|+||+|+.++|+.+|..|...+.... ..-.+...-.+.........+. ++.-.|+
T Consensus 179 APEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr--------vlflIpk~~PP~L~~~~S~~~k---EFV~~CL 247 (467)
T KOG0201|consen 179 APEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR--------VLFLIPKSAPPRLDGDFSPPFK---EFVEACL 247 (467)
T ss_pred chhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce--------EEEeccCCCCCccccccCHHHH---HHHHHHh
Confidence 3344444456789999999999999999999986443211 0011111111111112222333 7788999
Q ss_pred CCCCCCCCCcccC
Q 010041 506 SSQPKSRPTMQRI 518 (519)
Q Consensus 506 ~~~p~~RP~m~~v 518 (519)
..+|+.||+..+.
T Consensus 248 ~k~P~~RpsA~~L 260 (467)
T KOG0201|consen 248 DKNPEFRPSAKEL 260 (467)
T ss_pred hcCcccCcCHHHH
Confidence 9999999998764
No 228
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=97.22 E-value=0.00017 Score=70.40 Aligned_cols=25 Identities=40% Similarity=0.631 Sum_probs=22.5
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 187 ~~~~~DiwslG~~l~el~~g~~p~~ 211 (328)
T cd08226 187 YNVKSDIYSVGITACELATGRVPFQ 211 (328)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4578999999999999999999975
No 229
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.18 E-value=0.0001 Score=70.38 Aligned_cols=72 Identities=21% Similarity=0.258 Sum_probs=44.9
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC---CCChhHHHHHHHHHHHHHHhcCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP---PVNQKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~~~~~la~~C~~~~p 509 (519)
...+.+.|+||||++++|+++|+.|...... ....+.++..+.. ..+....+++. .+...|++.+|
T Consensus 176 ~~~~~~~DvwslGvil~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~s~~~~---~li~~~l~~~P 244 (285)
T cd05631 176 EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE--------RVKREEVDRRVKEDQEEYSEKFSEDAK---SICRMLLTKNP 244 (285)
T ss_pred CCCCcccCchhHHHHHHHHHhCCCCCCCCCc--------chhHHHHHHHhhcccccCCccCCHHHH---HHHHHHhhcCH
Confidence 3456789999999999999999999763211 0001111111111 11112223444 78999999999
Q ss_pred CCCCCc
Q 010041 510 KSRPTM 515 (519)
Q Consensus 510 ~~RP~m 515 (519)
++||+.
T Consensus 245 ~~R~~~ 250 (285)
T cd05631 245 KERLGC 250 (285)
T ss_pred HHhcCC
Confidence 999983
No 230
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.17 E-value=0.00012 Score=70.19 Aligned_cols=75 Identities=21% Similarity=0.334 Sum_probs=46.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCC--hhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVN--QKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.+.|+||||++++|+++|+.|....... .....+......... ....+++. .+...|+..+|.+
T Consensus 194 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~P~~ 262 (292)
T cd06658 194 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--------QAMRRIRDNLPPRVKDSHKVSSVLR---GFLDLMLVREPSQ 262 (292)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCCCccccccccCHHHH---HHHHHHccCChhH
Confidence 3456899999999999999999997531110 000111111111111 11122333 6788899999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
|||+.||.
T Consensus 263 Rpt~~~il 270 (292)
T cd06658 263 RATAQELL 270 (292)
T ss_pred CcCHHHHh
Confidence 99999873
No 231
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.17 E-value=0.00014 Score=69.06 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=46.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC---ChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV---NQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..+.+.|+||+|++++|+++|+.|...... .....+.......... .....+++. .+...|++.+|+
T Consensus 170 ~~~~~~DvwslGv~l~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~L~~~P~ 239 (277)
T cd05607 170 PYSYPVDWFAMGCSIYEMVAGRTPFKDHKE-------KVAKEELKRRTLEDEVKFEHQNFTEESK---DICRLFLAKKPE 239 (277)
T ss_pred CCCCchhHHHHHHHHHHHHhCCCCCCCCcc-------hhhHHHHHHHhhccccccccccCCHHHH---HHHHHHhccCHh
Confidence 356789999999999999999999753211 0000111111111000 011123333 889999999999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+||++.|+
T Consensus 240 ~R~~~~~~ 247 (277)
T cd05607 240 DRLGSREK 247 (277)
T ss_pred hCCCCccc
Confidence 99999664
No 232
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.16 E-value=0.00018 Score=64.61 Aligned_cols=84 Identities=24% Similarity=0.364 Sum_probs=41.3
Q ss_pred CCCCcEEECCCCccccccchhhcCCCCCCEEEcccC--cCCccCCccccCCCCCCEEEccCCCCCc--cCCccccCCCCC
Q 010041 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYEN--NLTGTIPKEIGSLRNLEVLDLGSNNLNG--TIPIEIGSVRNL 175 (519)
Q Consensus 100 l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n--~~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L 175 (519)
+..|+.|++.+..++.. ..+..+++|+.|.++.| ++++.++....++++|++|++++|++.- .+ ..+..+.+|
T Consensus 42 ~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl-~pl~~l~nL 118 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTL-RPLKELENL 118 (260)
T ss_pred ccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccccccc-chhhhhcch
Confidence 33444555544444321 23445566666666666 4444444444455666666666665541 11 113344555
Q ss_pred CEEEccCCcCc
Q 010041 176 ETLSLDGNKLS 186 (519)
Q Consensus 176 ~~L~L~~n~l~ 186 (519)
.+|++.+|..+
T Consensus 119 ~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 119 KSLDLFNCSVT 129 (260)
T ss_pred hhhhcccCCcc
Confidence 55555555443
No 233
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.16 E-value=0.00013 Score=68.02 Aligned_cols=74 Identities=24% Similarity=0.537 Sum_probs=47.0
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.+.|+|++|++++++++|+.|........ ...... ....+..+....+++. .+..+|+..+|++||+
T Consensus 176 ~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~R~~ 244 (254)
T cd06627 176 ASTASDIWSLGCTVIELLTGNPPYYDLNPMA-------ALFRIV-QDDHPPLPEGISPELK---DFLMQCFQKDPNLRPT 244 (254)
T ss_pred CCcchhHHHHHHHHHHHHhCCCCCCCccHHH-------HHHHHh-ccCCCCCCCCCCHHHH---HHHHHHHhCChhhCcC
Confidence 4578999999999999999999875322100 000110 0111111222223444 7889999999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
|.|+.
T Consensus 245 ~~~~l 249 (254)
T cd06627 245 AKQLL 249 (254)
T ss_pred HHHHh
Confidence 99874
No 234
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.16 E-value=0.00021 Score=64.21 Aligned_cols=63 Identities=27% Similarity=0.440 Sum_probs=30.6
Q ss_pred cCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCC--CCCccCCccccCCCCCCEEEccCCcCc
Q 010041 122 DSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSN--NLNGTIPIEIGSVRNLETLSLDGNKLS 186 (519)
Q Consensus 122 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n--~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (519)
..+..|+.|++.+..++.. ..|..+++|++|.++.| .+++.++.....+++|+++++++|++.
T Consensus 40 d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 40 DEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred ccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 3344445555444444321 23445556666666666 333333333344466666666666553
No 235
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.15 E-value=0.00025 Score=67.65 Aligned_cols=85 Identities=13% Similarity=0.040 Sum_probs=46.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccc------cccC----CCCCcch-----hhhhhhccCCCCChhHHHH-HHHH
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSS------LSSS----SGPKIML-----INVLDQRLSPPVNQKIVQD-IILV 497 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~------~~~~----~~~~~~~-----~~~~d~~~~~~~~~~~~~~-~~~~ 497 (519)
..+.+.|+||||++++|+++|+.|...... .... ....... ............ .....+ ...+
T Consensus 182 ~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 260 (287)
T cd07838 182 SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSF-KSFVPEICEEG 260 (287)
T ss_pred CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccch-hhhhhhhhHHH
Confidence 456789999999999999999887642110 0000 0000000 000000000000 111111 1234
Q ss_pred HHHHHHhcCCCCCCCCCcccCC
Q 010041 498 STIAFACLSSQPKSRPTMQRIS 519 (519)
Q Consensus 498 ~~la~~C~~~~p~~RP~m~~v~ 519 (519)
..+...|++.+|++||+|.|+.
T Consensus 261 ~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 261 LDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred HHHHHHHhccCCccCCCHHHHh
Confidence 4889999999999999999863
No 236
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.15 E-value=0.00011 Score=70.61 Aligned_cols=76 Identities=18% Similarity=0.266 Sum_probs=46.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC-CCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++|+.|........ ............ ..+.....++. .+...|+..+|++|
T Consensus 191 ~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~dp~~R 260 (296)
T cd06655 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTPELQNPEKLSPIFR---DFLNRCLEMDVEKR 260 (296)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhcCCcccCCcccCCHHHH---HHHHHHhhcChhhC
Confidence 34678999999999999999999975321110 000000000000 01111223333 77899999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.||.
T Consensus 261 pt~~~il 267 (296)
T cd06655 261 GSAKELL 267 (296)
T ss_pred CCHHHHh
Confidence 9998863
No 237
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.15 E-value=0.00017 Score=68.60 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=22.6
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+|++|++++++++|+.|..
T Consensus 175 ~~~~~~Di~slG~~l~~l~tg~~~~~ 200 (283)
T cd05118 175 GYSTPVDIWSVGCIFAELLSRRPLFP 200 (283)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 35678999999999999999998864
No 238
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.14 E-value=0.00021 Score=66.83 Aligned_cols=75 Identities=23% Similarity=0.330 Sum_probs=47.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+|++|++++++++|+.|..... .. ...+.......++.+.....++. .+..+|+..+|++||
T Consensus 179 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~Rp 247 (258)
T cd08215 179 PYNYKSDIWSLGCVLYELCTLKHPFEGEN-------LL-ELALKILKGQYPPIPSQYSSELR---NLVSSLLQKDPEERP 247 (258)
T ss_pred CCCccccHHHHHHHHHHHHcCCCCCCCCc-------HH-HHHHHHhcCCCCCCCCCCCHHHH---HHHHHHcCCChhhCc
Confidence 35678999999999999999999975321 00 11111111111122222223443 789999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.||.
T Consensus 248 ~~~~ll 253 (258)
T cd08215 248 SIAQIL 253 (258)
T ss_pred CHHHHh
Confidence 999863
No 239
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.14 E-value=0.00021 Score=67.98 Aligned_cols=74 Identities=27% Similarity=0.480 Sum_probs=46.4
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCC-hhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVN-QKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.++|+|+||++++|+++|+.|...... .......... ......+ ....+++. .+...|++.+|++||
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~l~---~li~~~l~~~p~~Rp 253 (283)
T cd06617 184 YDVKSDVWSLGITMIELATGRFPYDSWKT------PFQQLKQVVE-EPSPQLPAEKFSPEFQ---DFVNKCLKKNYKERP 253 (283)
T ss_pred cCccccchhhHHHHHHHHhCCCCCCcccc------CHHHHHHHHh-cCCCCCCccccCHHHH---HHHHHHccCChhhCc
Confidence 35689999999999999999999753210 0001111111 1111111 11223443 789999999999999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
++.||
T Consensus 254 ~~~~i 258 (283)
T cd06617 254 NYPEL 258 (283)
T ss_pred CHHHH
Confidence 99886
No 240
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.14 E-value=0.00016 Score=67.68 Aligned_cols=74 Identities=28% Similarity=0.512 Sum_probs=46.2
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+|++|++++|+++ |+.|..... .....+.+......+.......++ .+++.+|+..+|++|
T Consensus 180 ~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~l~~~p~~R 248 (258)
T smart00219 180 KFTSKSDVWSFGVLLWEIFTLGESPYPGMS--------NEEVLEYLKKGYRLPKPENCPPEI---YKLMLQCWAEDPEDR 248 (258)
T ss_pred CCCcchhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHhcCCCCCCCCcCCHHH---HHHHHHHCcCChhhC
Confidence 45678999999999999998 777764211 011111111111111111122333 478999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
||+.|+
T Consensus 249 pt~~~l 254 (258)
T smart00219 249 PTFSEL 254 (258)
T ss_pred cCHHHH
Confidence 999886
No 241
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.13 E-value=0.00013 Score=70.28 Aligned_cols=77 Identities=16% Similarity=0.246 Sum_probs=46.3
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++++++|+.|.......... .............+....+.+ ..+...|++.+|++||
T Consensus 191 ~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~p~~Rp 261 (297)
T cd06656 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNGTPELQNPERLSAVF---RDFLNRCLEMDVDRRG 261 (297)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe------eeeccCCCCCCCCccccCHHH---HHHHHHHccCChhhCc
Confidence 3457899999999999999999997532111000 000000000000111112233 3778999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+|.||+
T Consensus 262 s~~~il 267 (297)
T cd06656 262 SAKELL 267 (297)
T ss_pred CHHHHh
Confidence 999874
No 242
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.13 E-value=0.00027 Score=67.41 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=22.7
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||||++++++++|+.|..
T Consensus 178 ~~~~~~Dv~slG~~l~~l~~g~~~~~ 203 (288)
T cd07833 178 NYGKPVDVWAIGCIMAELLDGEPLFP 203 (288)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 45678999999999999999998864
No 243
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.12 E-value=0.00015 Score=79.78 Aligned_cols=81 Identities=22% Similarity=0.349 Sum_probs=48.9
Q ss_pred eeeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhc
Q 010041 426 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACL 505 (519)
Q Consensus 426 ~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~ 505 (519)
++++......+.++||||||++++|+++|..|...... ....+.....++ ....+..+...++.+|+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L 249 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----------TMSSLRHRVLPP---QILLNWPKEASFCLWLL 249 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----------HHHHHHHhhcCh---hhhhcCHHHHHHHHHhC
Confidence 33333334467899999999999999998887542110 000111111111 11111222347788999
Q ss_pred CCCCCCCCCcccCC
Q 010041 506 SSQPKSRPTMQRIS 519 (519)
Q Consensus 506 ~~~p~~RP~m~~v~ 519 (519)
+.+|.+||+|.||+
T Consensus 250 ~~~P~~Rps~~eil 263 (793)
T PLN00181 250 HPEPSCRPSMSELL 263 (793)
T ss_pred CCChhhCcChHHHh
Confidence 99999999999873
No 244
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.10 E-value=0.00016 Score=68.99 Aligned_cols=74 Identities=20% Similarity=0.236 Sum_probs=45.3
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC---CCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP---PVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..+.+.|+||||++++|+++|+.|...... ....+.+...+.. .......+++ ..+...|++.+|+
T Consensus 177 ~~~~~~Di~slG~~l~~l~~g~~P~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~P~ 245 (285)
T cd05632 177 RYTLSPDYWGLGCLIYEMIEGQSPFRGRKE--------KVKREEVDRRVLETEEVYSAKFSEEA---KSICKMLLTKDPK 245 (285)
T ss_pred CCCcccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhhhccccccCccCCHHH---HHHHHHHccCCHh
Confidence 456788999999999999999999753210 0000111111110 1111122333 3789999999999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+||++.|.
T Consensus 246 ~R~~~~~~ 253 (285)
T cd05632 246 QRLGCQEE 253 (285)
T ss_pred HcCCCccc
Confidence 99996643
No 245
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.10 E-value=0.00035 Score=73.97 Aligned_cols=151 Identities=23% Similarity=0.324 Sum_probs=89.9
Q ss_pred CCCCcEEECCCCccc-cccchhhc-CCCCCCEEEcccCcCCcc-CCccccCCCCCCEEEccCCCCCccCCccccCCCCCC
Q 010041 100 FPNLQYLDLGSNNLS-GSIPSQID-SLSNLTYIYLYENNLTGT-IPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (519)
Q Consensus 100 l~~L~~L~l~~n~~~-~~~~~~l~-~l~~L~~L~L~~n~~~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (519)
-.+|++|++++...- ..-|..++ -+|.|++|.+.+-.+... +.....++++|..||+|+++++.. ..++++++|+
T Consensus 121 r~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq 198 (699)
T KOG3665|consen 121 RQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQ 198 (699)
T ss_pred HHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHH
Confidence 356788888776432 22233333 368888888877555422 223345678888888888877633 4577788888
Q ss_pred EEEccCCcCcc-cCchhccCCCCCCEEeccCCcCCCCC--Cc----ccCCcCccCeeeCCCCcCCCcCChhh-ccCCCCc
Q 010041 177 TLSLDGNKLSG-TIPIEIESLRNLQWLDLSSNKLSGTI--PK----EIGSLRNLKELDLSSNKLGGVLPQEI-ENLKSLT 248 (519)
Q Consensus 177 ~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~--p~----~l~~l~~L~~L~l~~n~l~~~~p~~l-~~~~~L~ 248 (519)
+|.+.+=.+.. ..-..+.++++|+.||+|........ .. .-..+|+|+.||.++..+.+.+-+.+ ...++|+
T Consensus 199 ~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~ 278 (699)
T KOG3665|consen 199 VLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQ 278 (699)
T ss_pred HHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHh
Confidence 88777765542 22235667888888888876554321 11 11347788888888877665433222 3344454
Q ss_pred eeec
Q 010041 249 ALSM 252 (519)
Q Consensus 249 ~L~l 252 (519)
.+..
T Consensus 279 ~i~~ 282 (699)
T KOG3665|consen 279 QIAA 282 (699)
T ss_pred hhhh
Confidence 4443
No 246
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.10 E-value=0.00021 Score=69.30 Aligned_cols=75 Identities=19% Similarity=0.328 Sum_probs=45.5
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||||++++|+++|+.|........ ....................+ +..+...|++.+|.+||+
T Consensus 197 ~~~~sDv~slGvil~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~P~~Rp~ 266 (313)
T cd06633 197 YDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNDSPTLQSNEWTDS---FRGFVDYCLQKIPQERPA 266 (313)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHHhcCCCCCCccccCHH---HHHHHHHHccCChhhCcC
Confidence 4568999999999999999999964321100 000000000000011111122 337888999999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
+.|+.
T Consensus 267 ~~~~l 271 (313)
T cd06633 267 SAELL 271 (313)
T ss_pred HHHHh
Confidence 99863
No 247
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.09 E-value=0.00035 Score=68.52 Aligned_cols=26 Identities=27% Similarity=0.377 Sum_probs=22.8
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 184 ~~~~~~DvwSlGvvl~el~tg~~pf~ 209 (338)
T cd07859 184 KYTPAIDIWSIGCIFAEVLTGKPLFP 209 (338)
T ss_pred ccCchhHHHHHHHHHHHHHcCCCCCC
Confidence 34568999999999999999999874
No 248
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.09 E-value=0.00011 Score=70.17 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=21.8
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 178 ~~~~~Dv~slG~~l~el~~g~~~~~ 202 (286)
T cd07846 178 YGRAVDIWAVGCLVTEMLTGEPLFP 202 (286)
T ss_pred cCchHhHHHHHHHHHHHHcCCCCCC
Confidence 4568999999999999999998764
No 249
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.09 E-value=0.00013 Score=72.03 Aligned_cols=79 Identities=18% Similarity=0.312 Sum_probs=51.3
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..++..++||||+|+++++++.|+.|+..+..... .+..+.|+...-+++... +-..+..+|-.|++.||++
T Consensus 546 k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a------Kl~aI~~P~~~Iefp~~~--~~~~li~~mK~CL~rdPkk 617 (677)
T KOG0596|consen 546 KIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA------KLHAITDPNHEIEFPDIP--ENDELIDVMKCCLARDPKK 617 (677)
T ss_pred ceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH------HHHhhcCCCccccccCCC--CchHHHHHHHHHHhcCccc
Confidence 34577899999999999999999999875542110 111222332221221110 1111448899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+..|+
T Consensus 618 R~si~eL 624 (677)
T KOG0596|consen 618 RWSIPEL 624 (677)
T ss_pred CCCcHHH
Confidence 9999876
No 250
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.09 E-value=0.00022 Score=69.58 Aligned_cols=25 Identities=36% Similarity=0.567 Sum_probs=22.7
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 187 ~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 187 YDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCC
Confidence 4578999999999999999999975
No 251
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.08 E-value=0.0002 Score=67.59 Aligned_cols=75 Identities=23% Similarity=0.413 Sum_probs=45.5
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC---ChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV---NQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
.+.++|+||+|++++|+++|+.|....... ............++. .....+++ .++...|++.+|++
T Consensus 186 ~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~l~~~P~~ 255 (267)
T cd06645 186 YNQLCDIWAVGITAIELAELQPPMFDLHPM-------RALFLMTKSNFQPPKLKDKMKWSNSF---HHFVKMALTKNPKK 255 (267)
T ss_pred CCchhhhHHHHHHHHHHhcCCCCcccccch-------hhHHhhhccCCCCCcccccCCCCHHH---HHHHHHHccCCchh
Confidence 456899999999999999999986422110 000000000111000 00112233 37899999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+++||.
T Consensus 256 R~~~~~ll 263 (267)
T cd06645 256 RPTAEKLL 263 (267)
T ss_pred CcCHHHHh
Confidence 99998863
No 252
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.06 E-value=0.00027 Score=67.71 Aligned_cols=75 Identities=17% Similarity=0.334 Sum_probs=46.1
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC-CCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.+.|+||||++++|+++|+.|....... ............. ..+.....+ +..+...|++.+|++||
T Consensus 192 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~l~~~p~~Rp 261 (292)
T cd06644 192 YDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSEPPTLSQPSKWSME---FRDFLKTALDKHPETRP 261 (292)
T ss_pred CCchhhhHhHHHHHHHHhcCCCCCccccHH-------HHHHHHhcCCCccCCCCcccCHH---HHHHHHHHhcCCcccCc
Confidence 456899999999999999999997532210 0011111000000 011111223 34789999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.||.
T Consensus 262 ~~~~il 267 (292)
T cd06644 262 SAAQLL 267 (292)
T ss_pred CHHHHh
Confidence 999873
No 253
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.05 E-value=0.0004 Score=66.94 Aligned_cols=78 Identities=22% Similarity=0.340 Sum_probs=46.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccC---C-CCChhHH-HHHHHHHHHHHHhcCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLS---P-PVNQKIV-QDIILVSTIAFACLSSQ 508 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~---~-~~~~~~~-~~~~~~~~la~~C~~~~ 508 (519)
..+.|.|+||||+.++|+.+|..|+..+... ..+...+..... . ..+.+.. .--..+.+..-.|+..|
T Consensus 208 GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-------kvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kD 280 (516)
T KOG0582|consen 208 GYDFKADIWSFGITACELAHGHAPFSKYPPM-------KVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKD 280 (516)
T ss_pred CccchhhhhhhhHHHHHHhcCCCCcccCChH-------HHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcC
Confidence 3557999999999999999999998643211 111111111100 0 0011000 00012347788999999
Q ss_pred CCCCCCcccC
Q 010041 509 PKSRPTMQRI 518 (519)
Q Consensus 509 p~~RP~m~~v 518 (519)
|..|||.++.
T Consensus 281 P~kRptAskL 290 (516)
T KOG0582|consen 281 PSKRPTASKL 290 (516)
T ss_pred cccCCCHHHH
Confidence 9999998764
No 254
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.05 E-value=0.0002 Score=68.29 Aligned_cols=85 Identities=15% Similarity=0.210 Sum_probs=46.8
Q ss_pred ccccccccchhhhhcccccCCCCccccccc----------ccCCCCCcc-hhhh-hhhcc--CCCCChhH---HHH--HH
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSL----------SSSSGPKIM-LINV-LDQRL--SPPVNQKI---VQD--II 495 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~----------~~~~~~~~~-~~~~-~d~~~--~~~~~~~~---~~~--~~ 495 (519)
.+.+.|+|+||++++|+++|+.|.+..... .......+. ..+. ..... ........ ... ..
T Consensus 179 ~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (287)
T cd07840 179 YGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDP 258 (287)
T ss_pred CChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCH
Confidence 457899999999999999999987421110 000000000 0000 00000 00000000 001 23
Q ss_pred HHHHHHHHhcCCCCCCCCCcccCC
Q 010041 496 LVSTIAFACLSSQPKSRPTMQRIS 519 (519)
Q Consensus 496 ~~~~la~~C~~~~p~~RP~m~~v~ 519 (519)
.+.++...|++.+|++||++.||+
T Consensus 259 ~~~~~i~~~l~~~P~~Rp~~~~~l 282 (287)
T cd07840 259 SALDLLDKLLTLDPKKRISADQAL 282 (287)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHh
Confidence 456899999999999999999874
No 255
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.04 E-value=0.00034 Score=65.91 Aligned_cols=72 Identities=18% Similarity=0.299 Sum_probs=44.1
Q ss_pred eccccccccchhhhhcccc-cCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEIL-MGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l-~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|++ +|+.|...... .. ............ .+ ..+++ ..++..|++.+|++|
T Consensus 185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~--~~~~~~~~~~~~-~~-~~~~~---~~li~~cl~~dp~~R 251 (262)
T cd05077 185 NLSIAADKWSFGTTLWEICYNGEIPLKDKTL------AE--KERFYEGQCMLV-TP-SCKEL---ADLMTHCMNYDPNQR 251 (262)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCCCCcch------hH--HHHHHhcCccCC-CC-ChHHH---HHHHHHHcCCChhhC
Confidence 3456899999999999997 68877542110 00 000011111100 11 12333 478999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.|+
T Consensus 252 p~~~~i 257 (262)
T cd05077 252 PFFRAI 257 (262)
T ss_pred cCHHHH
Confidence 999986
No 256
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.03 E-value=0.00028 Score=67.75 Aligned_cols=75 Identities=19% Similarity=0.282 Sum_probs=45.8
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC-CCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP-PVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.++|+||||++++|+++|+.|......... ........... ........+ +..+...|++.+|++||
T Consensus 192 ~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~---l~~li~~~l~~~p~~Rp 261 (293)
T cd06647 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-------LYLIATNGTPELQNPEKLSAI---FRDFLNRCLEMDVEKRG 261 (293)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-------eeehhcCCCCCCCCccccCHH---HHHHHHHHccCChhhCc
Confidence 45689999999999999999999753221100 00000000000 001111122 33788999999999999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
++.|+.
T Consensus 262 ~~~~il 267 (293)
T cd06647 262 SAKELL 267 (293)
T ss_pred CHHHHh
Confidence 998863
No 257
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.02 E-value=0.00021 Score=69.14 Aligned_cols=26 Identities=31% Similarity=0.543 Sum_probs=22.6
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||||++++|+++|+.|..
T Consensus 174 ~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 174 HYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCC
Confidence 34568999999999999999999864
No 258
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.02 E-value=0.00013 Score=70.12 Aligned_cols=81 Identities=11% Similarity=0.019 Sum_probs=48.4
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC-CChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP-VNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|+++|+.|........ ........+.+.+...+. ......+++ ..+...|++.+|++
T Consensus 208 ~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 282 (294)
T PHA02882 208 ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG--NLIHAAKCDFIKRLHEGKIKIKNANKFI---YDFIECVTKLSYEE 282 (294)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--HHHHHhHHHHHHHhhhhhhccCCCCHHH---HHHHHHHHhCCCCC
Confidence 345678999999999999999999986432110 000000111111111000 011112333 38899999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.++
T Consensus 283 rp~~~~l 289 (294)
T PHA02882 283 KPDYDAL 289 (294)
T ss_pred CCCHHHH
Confidence 9999886
No 259
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=97.01 E-value=0.00047 Score=66.84 Aligned_cols=26 Identities=38% Similarity=0.547 Sum_probs=22.7
Q ss_pred ccccccccchhhhhcccccCCCCccc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGEL 460 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~ 460 (519)
.+.+.|+||||++++|+++|+.|...
T Consensus 187 ~~~~~Diws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 187 YNEKSDIYSVGITACELANGHVPFKD 212 (314)
T ss_pred CCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 45689999999999999999999753
No 260
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.00 E-value=0.00032 Score=66.72 Aligned_cols=74 Identities=23% Similarity=0.418 Sum_probs=46.1
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC--CChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP--VNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.++|+||||++++|+++|+.|....... ........ ...+. .+.....++. ++...|++.+|++|
T Consensus 185 ~~~~sDi~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R 253 (280)
T cd06611 185 YDYKADIWSLGITLIELAQMEPPHHELNPM-------RVLLKILK-SEPPTLDQPSKWSSSFN---DFLKSCLVKDPDDR 253 (280)
T ss_pred CCccccHHHHHHHHHHHHhCCCCcccCCHH-------HHHHHHhc-CCCCCcCCcccCCHHHH---HHHHHHhccChhhC
Confidence 456899999999999999999997532110 00111111 00000 1111223333 77889999999999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|++.+|.
T Consensus 254 ps~~~il 260 (280)
T cd06611 254 PTAAELL 260 (280)
T ss_pred cCHHHHh
Confidence 9999873
No 261
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.99 E-value=0.00029 Score=66.99 Aligned_cols=25 Identities=28% Similarity=0.214 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 176 ~~~~~Di~slGv~l~el~~~~~p~~ 200 (282)
T cd07831 176 YGPKMDIWAVGCVFFEILSLFPLFP 200 (282)
T ss_pred CCcchhHHHHHHHHHHHHcCCcCCC
Confidence 4568999999999999999998874
No 262
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=96.97 E-value=0.00031 Score=68.65 Aligned_cols=73 Identities=21% Similarity=0.420 Sum_probs=44.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcc----hhh-hhhhccCCCCChhHHHHHHHHHHHHHHhcCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIM----LIN-VLDQRLSPPVNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~----~~~-~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
..+.+.|+||||++++|+++|+.|....... ..+... ..+ ...... ..+.....++ ..+...|++.+
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~~~~~~~~~~~~~i~~~~~--~~p~~~~~~~---~~ll~~~L~~d 243 (329)
T cd05618 172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSS---DNPDQNTEDYLFQVILEKQI--RIPRSLSVKA---ASVLKSFLNKD 243 (329)
T ss_pred CCCCccceecccHHHHHHhhCCCCCccCCCc---CCcccccHHHHHHHHhcCCC--CCCCCCCHHH---HHHHHHHhcCC
Confidence 3456899999999999999999998643211 111111 111 111111 1122222333 37899999999
Q ss_pred CCCCCC
Q 010041 509 PKSRPT 514 (519)
Q Consensus 509 p~~RP~ 514 (519)
|++||+
T Consensus 244 P~~R~~ 249 (329)
T cd05618 244 PKERLG 249 (329)
T ss_pred HHHcCC
Confidence 999998
No 263
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.96 E-value=0.00031 Score=68.82 Aligned_cols=26 Identities=27% Similarity=0.525 Sum_probs=22.7
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||||++++|+++|+.|..
T Consensus 178 ~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 178 HYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 34568999999999999999999964
No 264
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=96.95 E-value=0.00038 Score=65.41 Aligned_cols=75 Identities=19% Similarity=0.179 Sum_probs=46.0
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+|++|++++|+++|+.|...... ..........+.......+....+++. .+...|++.+|++||
T Consensus 168 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~R~ 239 (262)
T cd05572 168 GYDFSVDYWSLGILLYELLTGRPPFGEDDE-----DPMEIYNDILKGNGKLEFPNYIDKAAK---DLIKQLLRRNPEERL 239 (262)
T ss_pred CCCChhhhhhhHHHHHHHHhCCCCcCCCCC-----CHHHHHHHHhccCCCCCCCcccCHHHH---HHHHHHccCChhhCc
Confidence 345789999999999999999999763220 000011111211111122222223444 889999999999999
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
+|.
T Consensus 240 ~~~ 242 (262)
T cd05572 240 GNL 242 (262)
T ss_pred CCc
Confidence 953
No 265
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.94 E-value=0.00041 Score=68.76 Aligned_cols=27 Identities=26% Similarity=0.351 Sum_probs=23.5
Q ss_pred eeccccccccchhhhhcccccCCCCcc
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
...+.++|+||+|++++|+++|+.|..
T Consensus 197 ~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 197 MGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 345678999999999999999999975
No 266
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=96.93 E-value=0.00032 Score=65.92 Aligned_cols=73 Identities=19% Similarity=0.342 Sum_probs=44.6
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.+.|+|+||++++|+++|+.|..... ...............+.......++ ..+...|++.+|++||+
T Consensus 178 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~l~~~p~~Rpt 247 (265)
T cd05579 178 HSKTVDWWSLGCILYEFLVGIPPFHGET-------PEEIFQNILNGKIEWPEDVEVSDEA---IDLISKLLVPDPEKRLG 247 (265)
T ss_pred CCcchhhHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhcCCcCCCccccCCHHH---HHHHHHHhcCCHhhcCC
Confidence 4568999999999999999999975321 0000111111111111111012333 48899999999999999
Q ss_pred ccc
Q 010041 515 MQR 517 (519)
Q Consensus 515 m~~ 517 (519)
+.+
T Consensus 248 ~~~ 250 (265)
T cd05579 248 AKS 250 (265)
T ss_pred Ccc
Confidence 944
No 267
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=96.93 E-value=0.00021 Score=69.30 Aligned_cols=71 Identities=17% Similarity=0.240 Sum_probs=44.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++++++|+.|..... ......+..+.....+......+++. ++..+|++.+|++||
T Consensus 208 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R~ 277 (316)
T cd05574 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSN-------RDETFSNILKKEVTFPGSPPVSSSAR---DLIRKLLVKDPSKRL 277 (316)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCCCCc-------hHHHHHHHhcCCccCCCccccCHHHH---HHHHHHccCCHhHCC
Confidence 34678999999999999999999975211 01111122222211111111223344 889999999999999
Q ss_pred C
Q 010041 514 T 514 (519)
Q Consensus 514 ~ 514 (519)
+
T Consensus 278 s 278 (316)
T cd05574 278 G 278 (316)
T ss_pred C
Confidence 9
No 268
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=96.92 E-value=0.00053 Score=64.64 Aligned_cols=78 Identities=19% Similarity=0.452 Sum_probs=47.2
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.+.|+|++|++++++++|+.|....... ...............+..+....+++. ++...|++.+|++||+
T Consensus 185 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~l~~~p~~R~~ 257 (268)
T cd06630 185 YGRSCDVWSVGCVIIEMATAKPPWNAEKHS----NHLALIFKIASATTAPSIPEHLSPGLR---DVTLRCLELQPEDRPP 257 (268)
T ss_pred CCcccchHHHHHHHHHHHhCCCCCCCCCCc----chHHHHHHHhccCCCCCCchhhCHHHH---HHHHHHcCCCcccCcC
Confidence 356899999999999999999997532110 000001111111111122222223333 7899999999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
+.|+.
T Consensus 258 ~~~ll 262 (268)
T cd06630 258 SRELL 262 (268)
T ss_pred HHHHh
Confidence 98863
No 269
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=96.92 E-value=0.00029 Score=67.73 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=46.0
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC--CChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP--VNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.++|+||||++++|+++|+.|....... .....+....... ......++ +..+...|++.+|++
T Consensus 193 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---l~~~i~~~l~~~P~~ 261 (297)
T cd06659 193 PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--------QAMKRLRDSPPPKLKNAHKISPV---LRDFLERMLTREPQE 261 (297)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhccCCCCccccCCCCHH---HHHHHHHHhcCCccc
Confidence 3467899999999999999999997521110 0000111100000 00111123 337889999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||++.||+
T Consensus 262 Rps~~~ll 269 (297)
T cd06659 262 RATAQELL 269 (297)
T ss_pred CcCHHHHh
Confidence 99999863
No 270
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=96.92 E-value=0.0004 Score=66.29 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=23.0
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||+|++++|+++|+.|..
T Consensus 177 ~~~~~~DiwslGvil~el~~g~~pf~ 202 (287)
T cd07848 177 PYGKAVDMWSVGCILGELSDGQPLFP 202 (287)
T ss_pred CCCCchhHHhHHHHHHHHHhCCCCCC
Confidence 35678999999999999999999875
No 271
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=96.88 E-value=0.0002 Score=68.19 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=22.0
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 177 ~~~~~Di~slG~~l~~l~~g~~pf~ 201 (283)
T cd07835 177 YSTPVDIWSIGCIFAEMVNRRPLFP 201 (283)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3568999999999999999998864
No 272
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=96.85 E-value=0.00046 Score=65.76 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 178 ~~~~~Di~slG~i~~~l~~g~~p~~ 202 (286)
T cd07847 178 YGPPVDVWAIGCVFAELLTGQPLWP 202 (286)
T ss_pred cCchhhhHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999864
No 273
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.84 E-value=0.00043 Score=65.97 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=22.0
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|++||+.|..
T Consensus 178 ~~~~~Dv~slG~il~~l~tg~~p~~ 202 (284)
T cd07860 178 YSTAVDIWSLGCIFAEMVTRRALFP 202 (284)
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 3567999999999999999999864
No 274
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.83 E-value=0.00032 Score=67.79 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 204 ~~~~~Dv~slG~il~el~~g~~~~~ 228 (311)
T cd07866 204 YTTAVDIWGIGCVFAEMFTRRPILQ 228 (311)
T ss_pred cCchhHhHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999998864
No 275
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.82 E-value=0.00042 Score=65.66 Aligned_cols=74 Identities=28% Similarity=0.477 Sum_probs=45.0
Q ss_pred ccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.+.|+||||++++|+++ |..|...... ..............+......+. +.+++.+|++.+|++||
T Consensus 195 ~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---l~~~i~~~l~~~p~~Rp 264 (275)
T cd05046 195 FSTKSDVWSFGVLMWEVFTQGELPFYGLSD-------EEVLNRLQAGKLELPVPEGCPSR---LYKLMTRCWAVNPKDRP 264 (275)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCccccch-------HHHHHHHHcCCcCCCCCCCCCHH---HHHHHHHHcCCCcccCC
Confidence 4567999999999999998 7777642210 00011111111111111112233 34899999999999999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
++.|+
T Consensus 265 ~~~~~ 269 (275)
T cd05046 265 SFSEL 269 (275)
T ss_pred CHHHH
Confidence 99886
No 276
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.82 E-value=0.00051 Score=66.12 Aligned_cols=25 Identities=20% Similarity=0.211 Sum_probs=22.0
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+|+||++++|+++|+.|..
T Consensus 195 ~~~~~Di~slG~~~~el~~g~~~~~ 219 (302)
T cd07864 195 YGPAIDVWSCGCILGELFTKKPIFQ 219 (302)
T ss_pred CCchhHHHHHHHHHHHHHhCCCCCC
Confidence 3567999999999999999998875
No 277
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.80 E-value=0.00053 Score=64.59 Aligned_cols=75 Identities=16% Similarity=0.304 Sum_probs=43.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|....... ....+.......+..+......+ ..+...|+. +|++||
T Consensus 185 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~l~-~p~~Rp 253 (265)
T cd06652 185 GYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-------AAIFKIATQPTNPVLPPHVSDHC---RDFLKRIFV-EAKLRP 253 (265)
T ss_pred CCCcchhHHHHHHHHHHHhhCCCCCCccchH-------HHHHHHhcCCCCCCCchhhCHHH---HHHHHHHhc-ChhhCC
Confidence 3457899999999999999999997532111 00111111111111222222222 245566664 899999
Q ss_pred CcccCC
Q 010041 514 TMQRIS 519 (519)
Q Consensus 514 ~m~~v~ 519 (519)
+++||.
T Consensus 254 ~~~~il 259 (265)
T cd06652 254 SADELL 259 (265)
T ss_pred CHHHHh
Confidence 999873
No 278
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=96.80 E-value=0.00056 Score=65.20 Aligned_cols=25 Identities=16% Similarity=0.251 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 179 ~~~~~Dv~slG~il~~l~tg~~~~~ 203 (285)
T cd07861 179 YSTPVDIWSIGTIFAEMATKKPLFH 203 (285)
T ss_pred cCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 4568999999999999999998874
No 279
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=96.80 E-value=0.00063 Score=65.33 Aligned_cols=23 Identities=17% Similarity=0.169 Sum_probs=20.6
Q ss_pred HHHHHHHhcCCCCCCCCCcccCC
Q 010041 497 VSTIAFACLSSQPKSRPTMQRIS 519 (519)
Q Consensus 497 ~~~la~~C~~~~p~~RP~m~~v~ 519 (519)
+.++..+|++.+|++|||+.||+
T Consensus 258 ~~~li~~~l~~~P~~R~s~~e~l 280 (298)
T cd07841 258 ALDLLQRLLTLNPNKRITARQAL 280 (298)
T ss_pred HHHHHHHHhcCCcccCcCHHHHh
Confidence 44899999999999999999874
No 280
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=96.79 E-value=0.00063 Score=64.76 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=44.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCC--CCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP--PVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.++|+||||++++|+++|+.|....... ....+........ ..+....+++. .+...|++.+|++
T Consensus 173 ~~~~~~DvwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~P~~ 242 (280)
T cd05608 173 EYDFSVDYFALGVTLYEMIAARGPFRARGEK-------VENKELKQRILNDSVTYPDKFSPASK---SFCEALLAKDPEK 242 (280)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCCcc-------hhHHHHHHhhcccCCCCcccCCHHHH---HHHHHHhcCCHHH
Confidence 4556899999999999999999997532110 0000111111111 11112223444 7889999999999
Q ss_pred CCCccc
Q 010041 512 RPTMQR 517 (519)
Q Consensus 512 RP~m~~ 517 (519)
||++++
T Consensus 243 R~~~~~ 248 (280)
T cd05608 243 RLGFRD 248 (280)
T ss_pred hcCCCC
Confidence 996543
No 281
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=96.79 E-value=0.0005 Score=67.21 Aligned_cols=77 Identities=18% Similarity=0.357 Sum_probs=45.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCC-CCcchhh-hhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSG-PKIMLIN-VLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~-~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.++|+||||++++|+++|+.|.+.......... ......+ ....... .+.....++ ..+...|++.+|.+
T Consensus 172 ~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~---~~li~~~L~~dP~~ 246 (329)
T cd05588 172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKA---SSVLKGFLNKDPKE 246 (329)
T ss_pred CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC--CCCCCCHHH---HHHHHHHhccCHHH
Confidence 445689999999999999999999864321110000 0001111 1111111 122222333 37889999999999
Q ss_pred CCCc
Q 010041 512 RPTM 515 (519)
Q Consensus 512 RP~m 515 (519)
||+.
T Consensus 247 R~~~ 250 (329)
T cd05588 247 RLGC 250 (329)
T ss_pred cCCC
Confidence 9983
No 282
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.79 E-value=0.00067 Score=63.54 Aligned_cols=72 Identities=29% Similarity=0.402 Sum_probs=44.5
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++ |..|....... . ........... +.+. . ..+.++...|++.+|++|
T Consensus 182 ~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~------~-~~~~~~~~~~~-~~~~--~---~~~~~li~~~l~~~p~~R 248 (259)
T cd05037 182 SLTIAADKWSFGTTLLEICSNGEEPLSTLSSS------E-KERFYQDQHRL-PMPD--C---AELANLINQCWTYDPTKR 248 (259)
T ss_pred CcchhhHHHHHHHHHHHHHhCCCCCcccCCch------h-HHHHHhcCCCC-CCCC--c---hHHHHHHHHHhccChhhC
Confidence 45678999999999999998 46665432110 0 00000011111 1111 1 234588999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|+|.||
T Consensus 249 pt~~~i 254 (259)
T cd05037 249 PSFRAI 254 (259)
T ss_pred CCHHHH
Confidence 999986
No 283
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=96.79 E-value=0.00065 Score=66.61 Aligned_cols=25 Identities=28% Similarity=0.365 Sum_probs=22.3
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||+|++++|+++|+.|..
T Consensus 187 ~~~~~DvwslGvil~el~~G~~~f~ 211 (336)
T cd07849 187 YTKAIDIWSVGCILAEMLSNRPLFP 211 (336)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4668999999999999999998874
No 284
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=96.78 E-value=0.00054 Score=66.57 Aligned_cols=72 Identities=24% Similarity=0.299 Sum_probs=45.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|...... ............ ..+.....++. .+...|++.+|++||
T Consensus 174 ~~~~~~DiwslG~il~el~tg~~p~~~~~~-------~~~~~~i~~~~~--~~p~~~~~~~~---~li~~~l~~~P~~R~ 241 (318)
T cd05582 174 GHTQSADWWSFGVLMFEMLTGSLPFQGKDR-------KETMTMILKAKL--GMPQFLSPEAQ---SLLRALFKRNPANRL 241 (318)
T ss_pred CCCCccceeccceEeeeeccCCCCCCCCCH-------HHHHHHHHcCCC--CCCCCCCHHHH---HHHHHHhhcCHhHcC
Confidence 346789999999999999999999753110 000111111111 11111223343 778999999999999
Q ss_pred Cccc
Q 010041 514 TMQR 517 (519)
Q Consensus 514 ~m~~ 517 (519)
++.+
T Consensus 242 ~a~~ 245 (318)
T cd05582 242 GAGP 245 (318)
T ss_pred CCCC
Confidence 9765
No 285
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=96.76 E-value=0.00068 Score=66.08 Aligned_cols=72 Identities=18% Similarity=0.275 Sum_probs=45.0
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ............. .+.....++. .+...|++.+|++||
T Consensus 177 ~~~~~~DiwslG~il~el~~G~~pf~~~~~-------~~~~~~i~~~~~~--~p~~~~~~~~---~li~~~L~~dP~~R~ 244 (324)
T cd05589 177 SYTRAVDWWGLGVLIYEMLVGESPFPGDDE-------EEVFDSIVNDEVR--YPRFLSREAI---SIMRRLLRRNPERRL 244 (324)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC--CCCCCCHHHH---HHHHHHhhcCHhHcC
Confidence 456789999999999999999999752110 0001111111111 1122223333 789999999999999
Q ss_pred Cccc
Q 010041 514 TMQR 517 (519)
Q Consensus 514 ~m~~ 517 (519)
++.+
T Consensus 245 ~~~~ 248 (324)
T cd05589 245 GSGE 248 (324)
T ss_pred CCCC
Confidence 7654
No 286
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.76 E-value=5.2e-05 Score=68.40 Aligned_cols=56 Identities=20% Similarity=0.200 Sum_probs=26.0
Q ss_pred CCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCC
Q 010041 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNL 161 (519)
Q Consensus 102 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l 161 (519)
+.+.|++.++.+++. ....+++.|+.|.|+-|+|+.. ..|..|++|++|+|..|.|
T Consensus 20 ~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I 75 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCI 75 (388)
T ss_pred HhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhccc
Confidence 444555555555432 2334455555555555555422 1234444555555544444
No 287
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=96.75 E-value=0.00082 Score=66.92 Aligned_cols=25 Identities=28% Similarity=0.324 Sum_probs=22.3
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||+|++++|+++|+.|..
T Consensus 182 ~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 182 YTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred CCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 4568899999999999999999974
No 288
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=96.75 E-value=0.00035 Score=66.02 Aligned_cols=77 Identities=19% Similarity=0.305 Sum_probs=41.3
Q ss_pred ccccccccchhhhhccccc-CCCCccccccccc-CCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILM-GRHPGELLSSLSS-SSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.+.|+||||++++|+++ |+.|......... ............++.+... ..+++. ++...|+ .+|++|
T Consensus 185 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~l~~~c~-~~P~~R 256 (268)
T cd05086 185 QTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELP----YSERWY---EVLQFCW-LSPEKR 256 (268)
T ss_pred CCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCC----CcHHHH---HHHHHHh-hCcccC
Confidence 3568999999999999986 4666542111000 0000000001111111111 122333 5667798 579999
Q ss_pred CCcccCC
Q 010041 513 PTMQRIS 519 (519)
Q Consensus 513 P~m~~v~ 519 (519)
|+|+||+
T Consensus 257 p~~~~i~ 263 (268)
T cd05086 257 ATAEEVH 263 (268)
T ss_pred CCHHHHH
Confidence 9999874
No 289
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=96.74 E-value=0.00038 Score=66.46 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=43.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||+|++++|+++|+.|....... .........+... ....+.....++. .+...|++.+|++||
T Consensus 177 ~~~~~~Diws~G~~l~el~~g~~pf~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~---~li~~~l~~~P~~R~ 248 (285)
T cd05605 177 RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK----VKREEVERRVKED-QEEYSEKFSEAAR---SICRQLLTKDPGFRL 248 (285)
T ss_pred CCCccccchhHHHHHHHHHHCCCCCCCCchh----hHHHHHHHHhhhc-ccccCcccCHHHH---HHHHHHccCCHHHhc
Confidence 4456889999999999999999997531100 0000011111111 1111122223333 889999999999999
Q ss_pred Cc
Q 010041 514 TM 515 (519)
Q Consensus 514 ~m 515 (519)
++
T Consensus 249 ~~ 250 (285)
T cd05605 249 GC 250 (285)
T ss_pred CC
Confidence 43
No 290
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=96.73 E-value=0.00054 Score=64.22 Aligned_cols=76 Identities=18% Similarity=0.140 Sum_probs=47.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||+|++++++++|+.|......- ........... .....+.....++. ++..+|++.+|.+||
T Consensus 175 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~---~~i~~~l~~~p~~R~ 245 (258)
T cd05578 175 GYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-----IRDQIRAKQET-ADVLYPATWSTEAI---DAINKLLERDPQKRL 245 (258)
T ss_pred CCCCcccchhhHHHHHHHHhCCCCCCCCCcc-----HHHHHHHHhcc-ccccCcccCcHHHH---HHHHHHccCChhHcC
Confidence 3567899999999999999999997632210 00011111110 11112222233444 788999999999999
Q ss_pred Cc--ccC
Q 010041 514 TM--QRI 518 (519)
Q Consensus 514 ~m--~~v 518 (519)
++ +|+
T Consensus 246 ~~~~~~l 252 (258)
T cd05578 246 GDNLKDL 252 (258)
T ss_pred CccHHHH
Confidence 99 664
No 291
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=96.72 E-value=0.00056 Score=65.35 Aligned_cols=76 Identities=18% Similarity=0.286 Sum_probs=45.3
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+|+||++++|+++|+.|........ ........+.... .+.+.....++ .++..+|++.+|++|||
T Consensus 185 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~l---~~li~~~l~~~p~~R~t 256 (288)
T cd05583 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQN----SQSEISRRILKSK-PPFPKTMSAEA---RDFIQKLLEKDPKKRLG 256 (288)
T ss_pred CcchhhhHHHHHHHHHHHhCCCCcccCcccc----hHHHHHHHHHccC-CCCCcccCHHH---HHHHHHHhcCCHhhccC
Confidence 4568999999999999999999964211100 0000111111111 11111122333 37789999999999999
Q ss_pred cccC
Q 010041 515 MQRI 518 (519)
Q Consensus 515 m~~v 518 (519)
+++|
T Consensus 257 ~~~~ 260 (288)
T cd05583 257 ANGA 260 (288)
T ss_pred cchH
Confidence 8776
No 292
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=96.71 E-value=0.0006 Score=65.33 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~~f~ 208 (293)
T cd07843 184 YSTAIDMWSVGCIFAELLTKKPLFP 208 (293)
T ss_pred ccchhhHHHHHHHHHHHHhCCCCCC
Confidence 4578999999999999999998864
No 293
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.71 E-value=0.00098 Score=65.37 Aligned_cols=25 Identities=28% Similarity=0.420 Sum_probs=22.3
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 190 ~~~~sDi~slG~~l~el~tg~~pf~ 214 (337)
T cd07852 190 YTKGVDMWSVGCILGEMLLGKPLFP 214 (337)
T ss_pred ccccchHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999874
No 294
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=96.71 E-value=0.00032 Score=66.32 Aligned_cols=74 Identities=27% Similarity=0.451 Sum_probs=42.7
Q ss_pred eccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhh---hhccCCC-CChhHHHHHHHHHHHHHHhcCCC
Q 010041 434 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL---DQRLSPP-VNQKIVQDIILVSTIAFACLSSQ 508 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~---d~~~~~~-~~~~~~~~~~~~~~la~~C~~~~ 508 (519)
..+.+.|+||||++++|+++ |+.|....... ......+ +..+..+ .+....++.. ++...|+ .+
T Consensus 185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~d 253 (269)
T cd05042 185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-------QVLKQVVREQDIKLPKPQLDLKYSDRWY---EVMQFCW-LD 253 (269)
T ss_pred ccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-------HHHHHHhhccCccCCCCcccccCCHHHH---HHHHHHh-cC
Confidence 34678999999999999998 77776432110 0000111 1111111 1111222333 5667787 59
Q ss_pred CCCCCCcccC
Q 010041 509 PKSRPTMQRI 518 (519)
Q Consensus 509 p~~RP~m~~v 518 (519)
|++||+++||
T Consensus 254 p~~Rpt~~~v 263 (269)
T cd05042 254 PETRPTAEEV 263 (269)
T ss_pred cccccCHHHH
Confidence 9999999987
No 295
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=96.71 E-value=4.8e-05 Score=72.47 Aligned_cols=85 Identities=21% Similarity=0.204 Sum_probs=41.7
Q ss_pred CCCCcEEeCcCCccccC--CchhhcCCCCCCEEECcCCcC-ccc----CCCCCCCCCCCcEEEccCccCc-cccchhhhc
Q 010041 316 LTSLQILDLSSNQLHSS--IPLVIGNFSALSYLDLSDNRI-CGI----IPDELTKLSHLKYLNLSSNLLS-GQIPFAIGK 387 (519)
Q Consensus 316 l~~L~~L~l~~n~l~~~--~~~~~~~~~~L~~L~l~~n~l-~~~----~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~ 387 (519)
.++|+.+++..+..... +...-.+++.|+.+.++.+.. ++. +...-.....|..+.++++..+ +..-..+..
T Consensus 345 ~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~ 424 (483)
T KOG4341|consen 345 CPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSI 424 (483)
T ss_pred ChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhh
Confidence 34555555554433211 112223455666666665532 211 1122234556666777766543 223344556
Q ss_pred ccCCCEEEccCCc
Q 010041 388 LFNLASLDLSKNK 400 (519)
Q Consensus 388 ~~~L~~L~l~~n~ 400 (519)
+++|+.+++-.++
T Consensus 425 c~~Leri~l~~~q 437 (483)
T KOG4341|consen 425 CRNLERIELIDCQ 437 (483)
T ss_pred Ccccceeeeechh
Confidence 6777777766654
No 296
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.68 E-value=0.00075 Score=64.44 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=22.6
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||+|++++|+++|+.|..
T Consensus 183 ~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 183 TYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred CCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 45678999999999999999998863
No 297
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=96.67 E-value=0.00069 Score=65.76 Aligned_cols=71 Identities=21% Similarity=0.279 Sum_probs=44.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ......+... .+..+.....++. .+...|++.+|++||
T Consensus 172 ~~~~~~DvwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~-~~~~~~~~~~~~~---~ll~~~l~~~P~~R~ 239 (316)
T cd05592 172 KYNESVDWWSFGVLLYEMLIGQSPFHGEDE--------DELFDSILND-RPHFPRWISKEAK---DCLSKLFERDPTKRL 239 (316)
T ss_pred CCCCcccchhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcC-CCCCCCCCCHHHH---HHHHHHccCCHHHcC
Confidence 456789999999999999999999752110 0111111111 1111222223443 778899999999999
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
++.
T Consensus 240 ~~~ 242 (316)
T cd05592 240 GVD 242 (316)
T ss_pred CCh
Confidence 875
No 298
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=96.67 E-value=0.00017 Score=67.55 Aligned_cols=83 Identities=23% Similarity=0.334 Sum_probs=48.9
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
....+.+.|+||+|++++++++|+.|........ ................... .......+.++...|++.+|++
T Consensus 173 ~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~ 247 (260)
T PF00069_consen 173 GKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD----QLEIIEKILKRPLPSSSQQ-SREKSEELRDLIKKMLSKDPEQ 247 (260)
T ss_dssp TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH----HHHHHHHHHHTHHHHHTTS-HTTSHHHHHHHHHHHSSSSGGG
T ss_pred cccccccccccccccccccccccccccccccchh----hhhhhhhcccccccccccc-cchhHHHHHHHHHHHccCChhH
Confidence 4567789999999999999999999976321000 0000001110000000000 0000134558999999999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.|++
T Consensus 248 R~~~~~l~ 255 (260)
T PF00069_consen 248 RPSAEELL 255 (260)
T ss_dssp STTHHHHH
T ss_pred CcCHHHHh
Confidence 99998863
No 299
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=96.66 E-value=0.00062 Score=63.91 Aligned_cols=73 Identities=21% Similarity=0.286 Sum_probs=44.4
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccC--CCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLS--PPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
.+.+.|+|+||++++|+++|+.|...... ............. ........+++ ..+...|++.+|++|
T Consensus 170 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~l~~~p~~R 239 (260)
T cd05611 170 DDKMSDWWSLGCVIFEFLFGYPPFHAETP-------DAVFDNILSRRINWPEEVKEFCSPEA---VDLINRLLCMDPAKR 239 (260)
T ss_pred CcchhhhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcccCCCCcccccCCHHH---HHHHHHHccCCHHHc
Confidence 46789999999999999999999752110 0000111111111 01111122333 488999999999999
Q ss_pred CCccc
Q 010041 513 PTMQR 517 (519)
Q Consensus 513 P~m~~ 517 (519)
|++.+
T Consensus 240 ~~~~~ 244 (260)
T cd05611 240 LGANG 244 (260)
T ss_pred cCCCc
Confidence 97753
No 300
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=96.66 E-value=0.0006 Score=67.41 Aligned_cols=26 Identities=19% Similarity=0.209 Sum_probs=22.8
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 194 ~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 194 GYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 35678999999999999999999864
No 301
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.66 E-value=0.00076 Score=65.09 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=44.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC-CChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP-VNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.+.|+||||++++|+++|+.|..... ...............+ .......++. .+..+|++.+|++|
T Consensus 192 ~~~~~~Di~slG~vl~el~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~P~~R 261 (305)
T cd05609 192 GYGKPVDWWAMGIILYEFLVGCVPFFGDT-------PEELFGQVISDDIEWPEGDEALPADAQ---DLISRLLRQNPLER 261 (305)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhcccCCCCccccCCHHHH---HHHHHHhccChhhc
Confidence 45678999999999999999999964210 0000111111111111 1111223343 88999999999999
Q ss_pred CCccc
Q 010041 513 PTMQR 517 (519)
Q Consensus 513 P~m~~ 517 (519)
|++.+
T Consensus 262 ~~~~~ 266 (305)
T cd05609 262 LGTGG 266 (305)
T ss_pred cCccC
Confidence 98643
No 302
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.61 E-value=0.00097 Score=63.35 Aligned_cols=26 Identities=19% Similarity=0.345 Sum_probs=22.2
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+|+||++++|+++|+.|..
T Consensus 175 ~~~~~~Dv~slG~~l~~l~~~~~~~~ 200 (282)
T cd07829 175 HYSTAVDIWSVGCIFAEMITGKPLFP 200 (282)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCC
Confidence 34568999999999999999988864
No 303
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=96.60 E-value=0.00084 Score=63.97 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=20.9
Q ss_pred ccccccccchhhhhcccccCCCCc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
.+.++|+||+|++++|+++|+.|.
T Consensus 178 ~~~~~Di~slG~~l~~l~tg~~~~ 201 (286)
T cd07832 178 YDPGVDLWAVGCIFAELLNGSPLF 201 (286)
T ss_pred CCchhHHHHHHHHHHHHHcCCcCc
Confidence 356899999999999999997665
No 304
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.60 E-value=0.00052 Score=65.38 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=20.9
Q ss_pred cccccccchhhhhcccccCCCCc
Q 010041 436 TEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 436 ~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
+.+.|+||||++++|+++|+.|.
T Consensus 178 ~~~~DiwslG~il~~l~tg~~p~ 200 (284)
T cd07839 178 STSIDMWSAGCIFAELANAGRPL 200 (284)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCC
Confidence 56789999999999999999884
No 305
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.60 E-value=0.00038 Score=74.69 Aligned_cols=77 Identities=19% Similarity=0.325 Sum_probs=47.2
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC-ChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV-NQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
.....+.|+||||++++|+++|+.|+.... .......+++.....+. ......+ +..+...|+..+|.+
T Consensus 555 ~~~~~~~DiwSlG~il~ElltG~~pf~~~~-------~~~~~~~il~~~~~~p~~~~~~~~~---~~~~l~~lL~~dP~~ 624 (669)
T cd05610 555 KPHGPAVDWWALGVCLFEFLTGIPPFNDET-------PQQVFQNILNRDIPWPEGEEKLSVN---AQNAIEILLTMDPTK 624 (669)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhcCCCCCcccccCCHH---HHHHHHHHcccChhH
Confidence 345678999999999999999999974211 00011122222211110 1111122 336788899999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+|.||+
T Consensus 625 R~ta~e~l 632 (669)
T cd05610 625 RAGLKELK 632 (669)
T ss_pred CcCHHHHH
Confidence 99999873
No 306
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=96.59 E-value=0.00069 Score=65.65 Aligned_cols=71 Identities=23% Similarity=0.263 Sum_probs=43.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||+|++++|+++|+.|...... ............ ..+....+++. .+...|++.+|++||
T Consensus 169 ~~~~~~DvwslGvil~el~tg~~pf~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~---~li~~~L~~dp~~R~ 236 (312)
T cd05585 169 GYTKAVDWWTLGVLLYEMLTGLPPFYDENV-------NEMYRKILQEPL--RFPDGFDRDAK---DLLIGLLSRDPTRRL 236 (312)
T ss_pred CCCCccceechhHHHHHHHhCCCCcCCCCH-------HHHHHHHHcCCC--CCCCcCCHHHH---HHHHHHcCCCHHHcC
Confidence 356789999999999999999999752110 000111111111 11122223444 778999999999998
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
+..
T Consensus 237 ~~~ 239 (312)
T cd05585 237 GYN 239 (312)
T ss_pred CCC
Confidence 753
No 307
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=96.56 E-value=0.00079 Score=65.36 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=44.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ....+.+... .+..+.....++. .+...|++.+|++||
T Consensus 172 ~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~i~~~-~~~~~~~~~~~~~---~li~~~l~~~P~~R~ 239 (316)
T cd05619 172 KYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--------EELFQSIRMD-NPCYPRWLTREAK---DILVKLFVREPERRL 239 (316)
T ss_pred CCCchhhhhhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC-CCCCCccCCHHHH---HHHHHHhccCHhhcC
Confidence 456789999999999999999999753110 0111111100 0111111223333 778899999999999
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
++.
T Consensus 240 ~~~ 242 (316)
T cd05619 240 GVK 242 (316)
T ss_pred CCh
Confidence 986
No 308
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.56 E-value=8.8e-05 Score=66.97 Aligned_cols=100 Identities=26% Similarity=0.306 Sum_probs=68.8
Q ss_pred CCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccC-chhccCCCCCCEE
Q 010041 124 LSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTI-PIEIESLRNLQWL 202 (519)
Q Consensus 124 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L 202 (519)
+.+.+.|+..++.++.+ .....|+.|+.|.|+-|+++..-| +..|++|++|+|..|.|...- -..+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 45667778888777643 334578888888888888875433 677888888888888875321 1346778888888
Q ss_pred eccCCcCCCCCCcc-----cCCcCccCeee
Q 010041 203 DLSSNKLSGTIPKE-----IGSLRNLKELD 227 (519)
Q Consensus 203 ~l~~n~l~~~~p~~-----l~~l~~L~~L~ 227 (519)
+|..|.-.|.-+.. +.-+++|++||
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhcc
Confidence 88888777665432 34456666654
No 309
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=96.55 E-value=0.00073 Score=66.64 Aligned_cols=74 Identities=22% Similarity=0.332 Sum_probs=44.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhh--hccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.+.|+||||++++|+++|+.|....... .....+.. .....+......+++. .+...|+. +|.+
T Consensus 206 ~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-------~~~~~i~~~~~~~~~p~~~~~~~~~~---~li~~ll~-dp~~ 274 (350)
T cd05573 206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQ-------ETYNKIINWKESLRFPPDPPVSPEAI---DLICRLLC-DPED 274 (350)
T ss_pred CCCCceeeEecchhhhhhccCCCCCCCCCHH-------HHHHHHhccCCcccCCCCCCCCHHHH---HHHHHHcc-Chhh
Confidence 4567899999999999999999997532110 00001111 1111111111223444 56677887 9999
Q ss_pred CCC-cccC
Q 010041 512 RPT-MQRI 518 (519)
Q Consensus 512 RP~-m~~v 518 (519)
||+ +.|+
T Consensus 275 R~~s~~~l 282 (350)
T cd05573 275 RLGSFEEI 282 (350)
T ss_pred cCCCHHHH
Confidence 999 7775
No 310
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.54 E-value=0.00094 Score=64.02 Aligned_cols=74 Identities=18% Similarity=0.336 Sum_probs=45.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC--ChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV--NQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.++|+||||++++|+++|+.|...... ......+........ ......++ ..+..+|++.+|.+
T Consensus 192 ~~~~~~Dv~slGvil~el~tg~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l---~~li~~~l~~~P~~ 260 (292)
T cd06657 192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRDNLPPKLKNLHKVSPSL---KGFLDRLLVRDPAQ 260 (292)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhhCCcccCCcccCCHHH---HHHHHHHHhCCccc
Confidence 345689999999999999999999642110 000111111111110 00111233 37788999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.||
T Consensus 261 R~~~~~l 267 (292)
T cd06657 261 RATAAEL 267 (292)
T ss_pred CcCHHHH
Confidence 9999886
No 311
>PTZ00284 protein kinase; Provisional
Probab=96.54 E-value=0.00094 Score=68.73 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=24.0
Q ss_pred ceeccccccccchhhhhcccccCCCCcc
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
....+.++|+||||++++|+++|+.|++
T Consensus 319 ~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 319 GLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3345678999999999999999999975
No 312
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.54 E-value=0.00097 Score=63.91 Aligned_cols=25 Identities=16% Similarity=0.185 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 189 ~~~~~Di~slG~~l~~l~~g~~~~~ 213 (295)
T cd07837 189 YSTPVDIWSVGCIFAEMSRKQPLFP 213 (295)
T ss_pred CCchHHHHHHHHHHHHHHcCCCCCC
Confidence 4678999999999999999998864
No 313
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=96.53 E-value=0.00094 Score=72.83 Aligned_cols=73 Identities=19% Similarity=0.345 Sum_probs=46.2
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++||||||++++|+++|+.|+...... ..+...+......+. .....++. .+...|++.+|.+||+
T Consensus 220 ~s~KSDVWSLG~ILYELLTGk~PF~~~~~~-------~qli~~lk~~p~lpi-~~~S~eL~---dLI~~~L~~dPeeRPS 288 (1021)
T PTZ00266 220 YDDKSDMWALGCIIYELCSGKTPFHKANNF-------SQLISELKRGPDLPI-KGKSKELN---ILIKNLLNLSAKERPS 288 (1021)
T ss_pred CCchhHHHHHHHHHHHHHHCCCCCCcCCcH-------HHHHHHHhcCCCCCc-CCCCHHHH---HHHHHHhcCChhHCcC
Confidence 467899999999999999999997532111 011111111111111 11123343 7899999999999999
Q ss_pred cccC
Q 010041 515 MQRI 518 (519)
Q Consensus 515 m~~v 518 (519)
+.|+
T Consensus 289 a~Ql 292 (1021)
T PTZ00266 289 ALQC 292 (1021)
T ss_pred HHHH
Confidence 9876
No 314
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=96.53 E-value=0.00062 Score=65.00 Aligned_cols=73 Identities=16% Similarity=0.203 Sum_probs=43.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|....... .........++ ............++. .+...|++.+|++||
T Consensus 177 ~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~---~li~~~l~~~p~~R~ 248 (285)
T cd05630 177 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERLVK-EVQEEYSEKFSPDAR---SLCKMLLCKDPKERL 248 (285)
T ss_pred CCCCccccHHHHHHHHHHHhCCCCCCCCCcc----chHHHHHhhhh-hhhhhcCccCCHHHH---HHHHHHhhcCHHHcc
Confidence 4566899999999999999999997632110 00000011111 001111111223333 788999999999999
Q ss_pred C
Q 010041 514 T 514 (519)
Q Consensus 514 ~ 514 (519)
|
T Consensus 249 s 249 (285)
T cd05630 249 G 249 (285)
T ss_pred C
Confidence 9
No 315
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.53 E-value=0.001 Score=65.35 Aligned_cols=26 Identities=23% Similarity=0.411 Sum_probs=22.7
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||+|++++|+++|+.|..
T Consensus 192 ~~~~~~DvwslGv~l~elltg~~pf~ 217 (343)
T cd07851 192 HYNQTVDIWSVGCIMAELLTGKTLFP 217 (343)
T ss_pred CCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 34578999999999999999999864
No 316
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=96.52 E-value=0.0012 Score=63.18 Aligned_cols=25 Identities=20% Similarity=0.317 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||+|++++|+++|+.|..
T Consensus 181 ~~~~~Dv~slG~il~~l~~g~~~~~ 205 (291)
T cd07844 181 YSTSLDMWGVGCIFYEMATGRPLFP 205 (291)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999998874
No 317
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.52 E-value=0.0017 Score=63.42 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=23.0
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||+|++++++++|+.|..
T Consensus 183 ~~~~~sDi~slG~il~~l~~g~~pf~ 208 (330)
T cd07834 183 RYTKAIDIWSVGCIFAELLTRKPLFP 208 (330)
T ss_pred CCCcchhHHHHHHHHHHHHcCCCCcC
Confidence 45678999999999999999999864
No 318
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=96.51 E-value=0.00069 Score=65.86 Aligned_cols=70 Identities=19% Similarity=0.267 Sum_probs=44.0
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|....... ........... ..+....+++. .+...|++.+|++||
T Consensus 172 ~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-------~~~~~i~~~~~--~~~~~~~~~~~---~li~~~l~~dP~~R~ 239 (318)
T cd05570 172 PYGPAVDWWALGVLLYEMLAGQSPFEGDDED-------ELFQSILEDEV--RYPRWLSKEAK---SILKSFLTKNPEKRL 239 (318)
T ss_pred CCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-------HHHHHHHcCCC--CCCCcCCHHHH---HHHHHHccCCHHHcC
Confidence 4567899999999999999999997532100 00001111111 11111223333 788999999999999
Q ss_pred Cc
Q 010041 514 TM 515 (519)
Q Consensus 514 ~m 515 (519)
++
T Consensus 240 s~ 241 (318)
T cd05570 240 GC 241 (318)
T ss_pred CC
Confidence 98
No 319
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=96.51 E-value=0.00087 Score=65.60 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=45.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhh--hhccCCCC-C---hhHHHHHHHHHHHHHHhcCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL--DQRLSPPV-N---QKIVQDIILVSTIAFACLSS 507 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~--d~~~~~~~-~---~~~~~~~~~~~~la~~C~~~ 507 (519)
..+.+.|+||+|++++|+++|+.|....... ....... ......+. . ....+++. .+...|+..
T Consensus 174 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~---~li~~~l~~ 243 (333)
T cd05600 174 GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN-------ETWENLKYWKETLQRPVYDDPRFNLSDEAW---DLITKLIND 243 (333)
T ss_pred CCCCccceecchHHHhhhhhCCCCCCCCCHH-------HHHHHHHhccccccCCCCCccccccCHHHH---HHHHHHhhC
Confidence 4567899999999999999999997531100 0000000 00000000 0 01123444 677899999
Q ss_pred CCCCCCCcccC
Q 010041 508 QPKSRPTMQRI 518 (519)
Q Consensus 508 ~p~~RP~m~~v 518 (519)
+|++||++.||
T Consensus 244 ~~~rr~s~~~l 254 (333)
T cd05600 244 PSRRFGSLEDI 254 (333)
T ss_pred hhhhcCCHHHH
Confidence 99999999886
No 320
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.51 E-value=0.0015 Score=63.90 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=42.9
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||||++++|+++|+.|....... .........+. ...++.+.....++. .+...|++.+|++||+
T Consensus 184 ~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~---~li~~~l~~dp~~R~~ 255 (332)
T cd05614 184 HGKAVDWWSLGILIFELLTGASPFTLEGER----NTQSEVSRRIL-KCDPPFPSFIGPEAQ---DLLHKLLRKDPKKRLG 255 (332)
T ss_pred CCCccccccchhhhhhhhcCCCCCCCCCCC----CCHHHHHHHHh-cCCCCCCCCCCHHHH---HHHHHHcCCCHHHcCC
Confidence 356899999999999999999997532110 00000001110 111111222223333 7789999999999995
Q ss_pred c
Q 010041 515 M 515 (519)
Q Consensus 515 m 515 (519)
.
T Consensus 256 ~ 256 (332)
T cd05614 256 A 256 (332)
T ss_pred C
Confidence 4
No 321
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=96.50 E-value=0.0012 Score=64.36 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=42.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|...... ............ ..+....+++. .+...|++.+|++||
T Consensus 176 ~~~~~~DiwslG~il~ell~G~~pf~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~---~li~~~l~~~p~~R~ 243 (323)
T cd05584 176 GHGKAVDWWSLGALMYDMLTGAPPFTAENR-------KKTIDKILKGKL--NLPPYLTPEAR---DLLKKLLKRNPSSRL 243 (323)
T ss_pred CCCCcceecccHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCC--CCCCCCCHHHH---HHHHHHcccCHhHcC
Confidence 345789999999999999999999753211 001111111111 11122223444 788999999999999
No 322
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=96.50 E-value=0.001 Score=64.82 Aligned_cols=68 Identities=19% Similarity=0.270 Sum_probs=42.7
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhh-hhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.++|+||+|++++|+++|+.|...... ....+.+ .... ..+....+++. .+...|++.+|++
T Consensus 170 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~~--~~p~~~~~~~~---~li~~~L~~dP~~ 236 (323)
T cd05571 170 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEI--RFPRTLSPEAK---SLLAGLLKKDPKQ 236 (323)
T ss_pred CCCCccccCcccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCCC--CCCCCCCHHHH---HHHHHHccCCHHH
Confidence 3456789999999999999999999742110 0011111 1111 11122223444 7788999999999
Q ss_pred CC
Q 010041 512 RP 513 (519)
Q Consensus 512 RP 513 (519)
||
T Consensus 237 R~ 238 (323)
T cd05571 237 RL 238 (323)
T ss_pred cC
Confidence 99
No 323
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=96.50 E-value=0.00095 Score=65.15 Aligned_cols=77 Identities=19% Similarity=0.331 Sum_probs=45.3
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhh-hhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINV-LDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++|+.|.+......... ........ ..... ..+.....++. .+...|++.+|++|
T Consensus 172 ~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~--~~p~~~~~~~~---~li~~~L~~dP~~R 245 (327)
T cd05617 172 EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-TEDYLFQVILEKPI--RIPRFLSVKAS---HVLKGFLNKDPKER 245 (327)
T ss_pred CCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-cHHHHHHHHHhCCC--CCCCCCCHHHH---HHHHHHhccCHHHc
Confidence 44568999999999999999999986322110000 00001111 11111 11111223333 78899999999999
Q ss_pred CCcc
Q 010041 513 PTMQ 516 (519)
Q Consensus 513 P~m~ 516 (519)
|+++
T Consensus 246 ~~~~ 249 (327)
T cd05617 246 LGCQ 249 (327)
T ss_pred CCCC
Confidence 9864
No 324
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.48 E-value=0.0017 Score=63.77 Aligned_cols=25 Identities=24% Similarity=0.473 Sum_probs=22.5
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 192 ~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 192 YNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred cCchHHHHHHHHHHHHHHhCCCCCC
Confidence 5678999999999999999999975
No 325
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.46 E-value=0.0014 Score=64.21 Aligned_cols=25 Identities=28% Similarity=0.268 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 186 ~~~~~DiwslG~il~~l~~g~~pf~ 210 (337)
T cd07858 186 YTTAIDVWSVGCIFAELLGRKPLFP 210 (337)
T ss_pred CCCcccHHHHHHHHHHHHcCCCCCC
Confidence 4568999999999999999999864
No 326
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.46 E-value=0.0019 Score=62.60 Aligned_cols=25 Identities=20% Similarity=0.313 Sum_probs=22.3
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|++||+.|..
T Consensus 193 ~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 4678999999999999999999864
No 327
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=96.43 E-value=0.0012 Score=63.13 Aligned_cols=25 Identities=20% Similarity=0.396 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|.+
T Consensus 181 ~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 181 YSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4567899999999999999999975
No 328
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=96.43 E-value=0.0012 Score=64.22 Aligned_cols=71 Identities=23% Similarity=0.244 Sum_probs=44.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||+|++++|+++|+.|...... ....+.+.... +..+.....++. .+...|++.+|++||
T Consensus 172 ~~~~~~DiwslGvil~el~~g~~Pf~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~---~li~~~l~~dP~~R~ 239 (316)
T cd05620 172 KYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--------DELFESIRVDT-PHYPRWITKESK---DILEKLFERDPTRRL 239 (316)
T ss_pred CCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC-CCCCCCCCHHHH---HHHHHHccCCHHHcC
Confidence 455789999999999999999999752110 01111111110 111111223444 778899999999999
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
++.
T Consensus 240 ~~~ 242 (316)
T cd05620 240 GVV 242 (316)
T ss_pred CCh
Confidence 984
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=96.43 E-value=0.00094 Score=64.02 Aligned_cols=25 Identities=16% Similarity=0.247 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||+|++++++++|+.|..
T Consensus 181 ~~~~~Dv~slG~i~~~l~tg~~pf~ 205 (294)
T PLN00009 181 YSTPVDIWSVGCIFAEMVNQKPLFP 205 (294)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999864
No 330
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.42 E-value=0.0014 Score=65.05 Aligned_cols=26 Identities=23% Similarity=0.284 Sum_probs=22.9
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 201 ~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 201 GYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred CCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 45678999999999999999999874
No 331
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=96.41 E-value=0.001 Score=66.71 Aligned_cols=81 Identities=25% Similarity=0.475 Sum_probs=49.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhh---hccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..+.+.|+||||+++.|+++.+.|++...... .+......+.+ +-.++...... +....++.++..||+.+|+
T Consensus 134 ~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~---~~~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~ 209 (484)
T KOG1023|consen 134 ALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE---DPDEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPE 209 (484)
T ss_pred cccccCCeehHHHHHHHHHhccCccccccccC---ChHHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChh
Confidence 35678999999999999999999987532211 11111111111 01111111110 1112466999999999999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+||++.+|
T Consensus 210 ~rPs~~~i 217 (484)
T KOG1023|consen 210 KRPSIEQI 217 (484)
T ss_pred hCccHHHH
Confidence 99999876
No 332
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.41 E-value=0.0012 Score=64.76 Aligned_cols=25 Identities=24% Similarity=0.311 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||+|++++|+++|+.|..
T Consensus 211 ~~~~~Dv~slG~~l~el~tg~~p~~ 235 (335)
T PTZ00024 211 YHFAVDMWSVGCIFAELLTGKPLFP 235 (335)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3568999999999999999998864
No 333
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.40 E-value=0.0014 Score=63.37 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||+|++++|+++|+.|..
T Consensus 186 ~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 186 YTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred cCchHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999998864
No 334
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=96.40 E-value=0.0011 Score=61.71 Aligned_cols=69 Identities=20% Similarity=0.267 Sum_probs=44.2
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.+.|+|+||++++|+++|+.|...... ............ +.+.....++. ++...|+..+|++||+
T Consensus 170 ~~~~~D~~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~l~---~~i~~~l~~~p~~R~~ 237 (250)
T cd05123 170 YGKAVDWWSLGVLLYEMLTGKPPFYAEDR-------KEIYEKILKDPL--RFPEFLSPEAR---DLISGLLQKDPTKRLG 237 (250)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHhcCCC--CCCCCCCHHHH---HHHHHHhcCCHhhCCC
Confidence 45689999999999999999999753210 000111111111 11222223343 8899999999999999
Q ss_pred c
Q 010041 515 M 515 (519)
Q Consensus 515 m 515 (519)
+
T Consensus 238 ~ 238 (250)
T cd05123 238 S 238 (250)
T ss_pred c
Confidence 9
No 335
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=96.39 E-value=0.0011 Score=64.56 Aligned_cols=69 Identities=22% Similarity=0.302 Sum_probs=43.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhh-hhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++|+.|...... ....+.+ ..... .+.....++. .+...|++.+|++|
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~--~~~~~~~~~~---~li~~~L~~dP~~R 238 (320)
T cd05590 172 LYGPSVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVV--YPTWLSQDAV---DILKAFMTKNPTMR 238 (320)
T ss_pred CCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCCC--CCCCCCHHHH---HHHHHHcccCHHHC
Confidence 345689999999999999999999753211 0111111 11111 1111223444 77899999999999
Q ss_pred CCc
Q 010041 513 PTM 515 (519)
Q Consensus 513 P~m 515 (519)
|+.
T Consensus 239 ~~~ 241 (320)
T cd05590 239 LGS 241 (320)
T ss_pred CCC
Confidence 997
No 336
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=96.39 E-value=0.0016 Score=62.69 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=22.0
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 182 ~~~~~Dv~slG~~l~el~tg~~~f~ 206 (301)
T cd07873 182 YSTQIDMWGVGCIFYEMSTGRPLFP 206 (301)
T ss_pred CccHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568899999999999999998864
No 337
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.39 E-value=0.0015 Score=63.29 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=22.3
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 193 ~~~~~Dv~slG~~l~~l~~~~~~~~ 217 (316)
T cd07842 193 YTKAIDIWAIGCIFAELLTLEPIFK 217 (316)
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 4568999999999999999999875
No 338
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.36 E-value=0.0025 Score=61.51 Aligned_cols=25 Identities=12% Similarity=0.135 Sum_probs=21.7
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 201 ~~~~~Di~slG~~l~el~t~~~~~~ 225 (310)
T cd07865 201 YGPPIDMWGAGCIMAEMWTRSPIMQ 225 (310)
T ss_pred cCchhhhHHHHHHHHHHHhCCCCCC
Confidence 3468999999999999999998864
No 339
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=96.34 E-value=0.0012 Score=64.33 Aligned_cols=69 Identities=17% Similarity=0.288 Sum_probs=42.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||+|++++|+++|+.|...... ............. .+.....++. .+...|++.+|++||
T Consensus 172 ~~~~~~DvwslG~il~el~tg~~Pf~~~~~-------~~~~~~i~~~~~~--~p~~~~~~~~---~ll~~~L~~dp~~R~ 239 (321)
T cd05591 172 EYGPSVDWWALGVLMYEMMAGQPPFEADNE-------DDLFESILHDDVL--YPVWLSKEAV---SILKAFMTKNPNKRL 239 (321)
T ss_pred CCCCccceechhHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCC--CCCCCCHHHH---HHHHHHhccCHHHcC
Confidence 456789999999999999999999763210 0001111111111 1111123443 778899999999999
Q ss_pred C
Q 010041 514 T 514 (519)
Q Consensus 514 ~ 514 (519)
+
T Consensus 240 ~ 240 (321)
T cd05591 240 G 240 (321)
T ss_pred C
Confidence 4
No 340
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=96.33 E-value=0.0017 Score=63.34 Aligned_cols=70 Identities=17% Similarity=0.354 Sum_probs=44.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ............. .+....+++. .+...|++.+|++||
T Consensus 177 ~~~~~~DiwSlGvil~elltg~~Pf~~~~~-------~~~~~~i~~~~~~--~p~~~s~~~~---~li~~~l~~~p~~R~ 244 (323)
T cd05616 177 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEHNVA--YPKSMSKEAV---AICKGLMTKHPGKRL 244 (323)
T ss_pred CCCCccchhchhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC--CCCcCCHHHH---HHHHHHcccCHHhcC
Confidence 456789999999999999999999753211 0001111111111 1222223443 789999999999999
Q ss_pred Cc
Q 010041 514 TM 515 (519)
Q Consensus 514 ~m 515 (519)
+.
T Consensus 245 ~~ 246 (323)
T cd05616 245 GC 246 (323)
T ss_pred CC
Confidence 85
No 341
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.30 E-value=0.0026 Score=62.51 Aligned_cols=25 Identities=24% Similarity=0.357 Sum_probs=22.4
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 196 ~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 196 YTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred cCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999975
No 342
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=96.30 E-value=0.0034 Score=60.89 Aligned_cols=25 Identities=20% Similarity=0.313 Sum_probs=22.3
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 193 ~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 193 YTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred cCchhhHHHHHHHHHHHHhCCCCcc
Confidence 4568999999999999999999864
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.29 E-value=0.0012 Score=64.63 Aligned_cols=25 Identities=28% Similarity=0.297 Sum_probs=22.6
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 189 ~~~~~Di~slG~~l~el~~g~~pf~ 213 (334)
T cd07855 189 YTTAIDMWSVGCIFAEMLGRRQLFP 213 (334)
T ss_pred cccccchHHHHHHHHHHHcCCCccC
Confidence 5678999999999999999999974
No 344
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=96.28 E-value=0.0016 Score=64.41 Aligned_cols=26 Identities=23% Similarity=0.290 Sum_probs=22.6
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||||++++++++|+.|..
T Consensus 193 ~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 193 GYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred CCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 35678999999999999999998864
No 345
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=96.28 E-value=0.0012 Score=65.82 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=49.1
Q ss_pred ceeccccccccchhhhhcccc--cCCCCcccccccccCCCCCcchhhhhh-h--ccCCCCChhHHHHHHHHHHHHHHhcC
Q 010041 432 TMVVTEKCDVYSFGVVALEIL--MGRHPGELLSSLSSSSGPKIMLINVLD-Q--RLSPPVNQKIVQDIILVSTIAFACLS 506 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l--~g~~p~~~~~~~~~~~~~~~~~~~~~d-~--~~~~~~~~~~~~~~~~~~~la~~C~~ 506 (519)
..+++.++|||+||+.++|++ +...|++.+..-.- .....+.++ + ..-...+..++.++. ++++.||.
T Consensus 713 lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v----ven~~~~~~~~~~~~~l~~P~~cp~~ly---elml~Cw~ 785 (807)
T KOG1094|consen 713 LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV----VENAGEFFRDQGRQVVLSRPPACPQGLY---ELMLRCWR 785 (807)
T ss_pred hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH----HHhhhhhcCCCCcceeccCCCcCcHHHH---HHHHHHhc
Confidence 346889999999999999975 57788764321100 000001110 0 000011233344444 89999999
Q ss_pred CCCCCCCCcccC
Q 010041 507 SQPKSRPTMQRI 518 (519)
Q Consensus 507 ~~p~~RP~m~~v 518 (519)
.+.++||+++++
T Consensus 786 ~es~~RPsFe~l 797 (807)
T KOG1094|consen 786 RESEQRPSFEQL 797 (807)
T ss_pred hhhhcCCCHHHH
Confidence 999999999886
No 346
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.25 E-value=0.0018 Score=59.82 Aligned_cols=69 Identities=20% Similarity=0.247 Sum_probs=43.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||+|++++|+++|+.|.+..... .. ....-.+. ....+++. .+..+|++.+|++||
T Consensus 158 ~~~~~~DvwslG~il~el~~g~~~~~~~~~~---~~------~~~~~~~~----~~~~~~~~---~li~~~l~~dp~~R~ 221 (237)
T cd05576 158 EETEACDWWSLGAILFELLTGKTLVECHPSG---IN------THTTLNIP----EWVSEEAR---SLLQQLLQFNPTERL 221 (237)
T ss_pred CCCchhhHHHHHHHHHHHHHCcchhhcCchh---cc------cccccCCc----ccCCHHHH---HHHHHHccCCHHHhc
Confidence 3456899999999999999999875421110 00 00000111 11122333 778999999999999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
++.++
T Consensus 222 ~~~~~ 226 (237)
T cd05576 222 GAGVA 226 (237)
T ss_pred CCCcc
Confidence 98554
No 347
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.24 E-value=0.0018 Score=61.63 Aligned_cols=75 Identities=13% Similarity=0.211 Sum_probs=45.3
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC-
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP- 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP- 513 (519)
.+.+.|+||||++++|+++|+.|...... .................+.....++. .+...|+..+|++||
T Consensus 173 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~l~~~p~~R~~ 243 (279)
T cd05633 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKT------KDKHEIDRMTLTVNVELPDSFSPELK---SLLEGLLQRDVSKRLG 243 (279)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCcCCCCC------cCHHHHHHHhhcCCcCCccccCHHHH---HHHHHHhcCCHHHhcC
Confidence 45689999999999999999999753211 00000011111111112222233444 677899999999999
Q ss_pred ----CcccC
Q 010041 514 ----TMQRI 518 (519)
Q Consensus 514 ----~m~~v 518 (519)
+++|+
T Consensus 244 ~~~~~~~~~ 252 (279)
T cd05633 244 CLGRGAQEV 252 (279)
T ss_pred CCCCCHHHH
Confidence 47664
No 348
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.24 E-value=0.00063 Score=70.27 Aligned_cols=172 Identities=24% Similarity=0.122 Sum_probs=87.1
Q ss_pred CCCCCCEEEcccCcCCcc--CCccccCCCCCCEEEccCC-CCCccCC----ccccCCCCCCEEEccCCc-CcccCchhcc
Q 010041 123 SLSNLTYIYLYENNLTGT--IPKEIGSLRNLEVLDLGSN-NLNGTIP----IEIGSVRNLETLSLDGNK-LSGTIPIEIE 194 (519)
Q Consensus 123 ~l~~L~~L~L~~n~~~~~--~p~~~~~l~~L~~L~L~~n-~l~~~~p----~~l~~l~~L~~L~L~~n~-l~~~~p~~l~ 194 (519)
.++.|+.|.+..+.-... .-.....+++|+.|+++++ ......+ .....+++|+.|+++++. ++...-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 367777777766533222 2233456677777777662 1111111 123346777777877776 4433223333
Q ss_pred C-CCCCCEEeccCCc-CCCCCCc-ccCCcCccCeeeCCCCcCCC--cCChhhccCCCCceeecccccccCcCcccccCCC
Q 010041 195 S-LRNLQWLDLSSNK-LSGTIPK-EIGSLRNLKELDLSSNKLGG--VLPQEIENLKSLTALSMDANNLGGPIPSTLFRLT 269 (519)
Q Consensus 195 ~-l~~L~~L~l~~n~-l~~~~p~-~l~~l~~L~~L~l~~n~l~~--~~p~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~~ 269 (519)
. +++|++|.+.++. ++..--. ....+++|++|++++|.... .+.....++++++.+.+....- +.
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~----------c~ 335 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNG----------CP 335 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCC----------Cc
Confidence 2 6778888776665 4433211 22356778888887765421 1222234455565554432211 33
Q ss_pred CcceeeccCccCc---ccCChhccCCCCCCEEeccCCc
Q 010041 270 NIEYLSLGFNRFN---GSIPREIVNLKNLTSLSLGGNK 304 (519)
Q Consensus 270 ~L~~L~l~~n~~~---~~~~~~l~~~~~L~~L~l~~n~ 304 (519)
.++.+.+...... .........+++++.+.+..+.
T Consensus 336 ~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 336 SLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCG 373 (482)
T ss_pred cHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhh
Confidence 3444444332221 1222334566777777776665
No 349
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.21 E-value=0.0015 Score=62.02 Aligned_cols=69 Identities=14% Similarity=0.288 Sum_probs=44.7
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+|++|++++++++|+.|....... .......+... ..+....+++ ..+..+|++.+|++||+
T Consensus 199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~---~~li~~~l~~~p~~R~~ 266 (280)
T cd05581 199 AGKSSDLWALGCIIYQMLTGKPPFRGSNEY-------LTFQKILKLEY--SFPPNFPPDA---KDLIEKLLVLDPQDRLG 266 (280)
T ss_pred CChhhhHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHHhcCC--CCCCccCHHH---HHHHHHHhcCCHhhCCC
Confidence 567899999999999999999997632210 00111111111 1112222333 38899999999999999
Q ss_pred c
Q 010041 515 M 515 (519)
Q Consensus 515 m 515 (519)
+
T Consensus 267 ~ 267 (280)
T cd05581 267 V 267 (280)
T ss_pred c
Confidence 9
No 350
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=96.21 E-value=0.0031 Score=56.94 Aligned_cols=73 Identities=25% Similarity=0.417 Sum_probs=49.8
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 516 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 516 (519)
+.+|.|||.++++|+.|..+|...+.... .+.++.+ ++++...++.....|. +++--|..+||.+||.+.
T Consensus 368 raadmwsfaillwel~trevpfadlspme--cgmkial-----eglrv~ippgis~hm~---klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 368 RAADMWSFAILLWELNTREVPFADLSPME--CGMKIAL-----EGLRVHIPPGISRHMN---KLMNICMNEDPGKRPKFD 437 (448)
T ss_pred hhhhHHHHHHHHHHhhccccccccCCchh--hhhhhhh-----ccccccCCCCccHHHH---HHHHHHhcCCCCcCCCcc
Confidence 57899999999999999999987544332 2222211 2233323333334444 778889999999999998
Q ss_pred cCC
Q 010041 517 RIS 519 (519)
Q Consensus 517 ~v~ 519 (519)
.||
T Consensus 438 miv 440 (448)
T KOG0195|consen 438 MIV 440 (448)
T ss_pred eeh
Confidence 875
No 351
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=96.21 E-value=0.0014 Score=63.76 Aligned_cols=70 Identities=19% Similarity=0.259 Sum_probs=43.1
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
....+.++|+||||++++|+++|+.|...... ............. .+....+++. .+...|++.+|++
T Consensus 169 ~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-------~~~~~~~~~~~~~--~p~~~~~~~~---~li~~~L~~dP~~ 236 (323)
T cd05595 169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILMEEIR--FPRTLSPEAK---SLLAGLLKKDPKQ 236 (323)
T ss_pred CCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCCC--CCCCCCHHHH---HHHHHHccCCHHH
Confidence 33456789999999999999999999752110 0001111111111 1112223444 7788999999999
Q ss_pred CC
Q 010041 512 RP 513 (519)
Q Consensus 512 RP 513 (519)
||
T Consensus 237 R~ 238 (323)
T cd05595 237 RL 238 (323)
T ss_pred hC
Confidence 98
No 352
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.20 E-value=0.0004 Score=71.75 Aligned_cols=235 Identities=26% Similarity=0.183 Sum_probs=125.3
Q ss_pred CCCCCCEEEccCCCCCcc--CCccccCCCCCCEEEccCC-cCcccCc----hhccCCCCCCEEeccCCc-CCCCCCcccC
Q 010041 147 SLRNLEVLDLGSNNLNGT--IPIEIGSVRNLETLSLDGN-KLSGTIP----IEIESLRNLQWLDLSSNK-LSGTIPKEIG 218 (519)
Q Consensus 147 ~l~~L~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L~~n-~l~~~~p----~~l~~l~~L~~L~l~~n~-l~~~~p~~l~ 218 (519)
.++.|+.|.+.++.-... .-.....+++|+.|+++++ ......+ .....+++|+.|+++.+. ++...-..++
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 468888888887743322 2233557788999998873 2211111 234456888899998887 4433223333
Q ss_pred -CcCccCeeeCCCCc-CCCc-CChhhccCCCCceeecccccccCc--CcccccCCCCcceeeccCccCcccCChhccCCC
Q 010041 219 -SLRNLKELDLSSNK-LGGV-LPQEIENLKSLTALSMDANNLGGP--IPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLK 293 (519)
Q Consensus 219 -~l~~L~~L~l~~n~-l~~~-~p~~l~~~~~L~~L~l~~n~l~~~--~~~~l~~~~~L~~L~l~~n~~~~~~~~~l~~~~ 293 (519)
.+++|++|.+.+|. ++.. +-.....++.|++|+++.+..... +.....++++++.+.+.... .++
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~----------~c~ 335 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN----------GCP 335 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC----------CCc
Confidence 37889998877776 4432 122335677899999987754311 22223445666665543221 134
Q ss_pred CCCEEeccCCccc---ccCCCCCCCCCCCcEEeCcCCccccCC-chhhcCCCCCCEEECcCCcCcccCCCCCCCCCCCcE
Q 010041 294 NLTSLSLGGNKLT---GHIPSTLGRLTSLQILDLSSNQLHSSI-PLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKY 369 (519)
Q Consensus 294 ~L~~L~l~~n~l~---~~~~~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 369 (519)
.++.+.+.+.... .........+++++.+.+..+...... ...+..++.|. ..+... .....+++.
T Consensus 336 ~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~~---------~~~~~~l~~ 405 (482)
T KOG1947|consen 336 SLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLELR---------LCRSDSLRV 405 (482)
T ss_pred cHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHHH---------hccCCccce
Confidence 4455544433221 112224456788888888877743322 23445555552 221111 111122777
Q ss_pred EEccCccCccc-cchhhhc-ccCCCEEEccCCcc
Q 010041 370 LNLSSNLLSGQ-IPFAIGK-LFNLASLDLSKNKL 401 (519)
Q Consensus 370 L~l~~n~l~~~-~~~~~~~-~~~L~~L~l~~n~l 401 (519)
|+++.+..... .-..... +..++.+++.++..
T Consensus 406 L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 406 LNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred EecccCccccccchHHHhhhhhccccCCccCccc
Confidence 77777654321 1111111 55566666666543
No 353
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=96.19 E-value=0.003 Score=61.69 Aligned_cols=71 Identities=20% Similarity=0.271 Sum_probs=42.2
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||+|++++|+++|+.|...... ..............+ .....+++. .+...|++.+|.+||+
T Consensus 174 ~~~~~DvwslGvil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~-~~~~~~~~~---~li~~~L~~~P~~R~~ 242 (330)
T cd05586 174 YTKHVDFWSLGVLVFEMCCGWSPFYAEDT-------QQMYRNIAFGKVRFP-KNVLSDEGR---QFVKGLLNRNPQHRLG 242 (330)
T ss_pred CCCccceeccccEEEEeccCCCCCCCCCH-------HHHHHHHHcCCCCCC-CccCCHHHH---HHHHHHcCCCHHHCCC
Confidence 45689999999999999999999642110 000001111111111 011123333 7789999999999996
Q ss_pred cc
Q 010041 515 MQ 516 (519)
Q Consensus 515 m~ 516 (519)
+.
T Consensus 243 ~~ 244 (330)
T cd05586 243 AH 244 (330)
T ss_pred CC
Confidence 43
No 354
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=96.19 E-value=0.0025 Score=62.07 Aligned_cols=71 Identities=20% Similarity=0.214 Sum_probs=44.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|...... ............. .......++. .+...|++.+|.+||
T Consensus 172 ~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~--~~~~~~~~~~---~li~~~l~~~p~~R~ 239 (323)
T cd05575 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-------AEMYDNILNKPLR--LKPNISVSAR---HLLEGLLQKDRTKRL 239 (323)
T ss_pred CCCccccccccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCCC--CCCCCCHHHH---HHHHHHhhcCHHhCC
Confidence 345689999999999999999999752110 0000111111111 1111223444 778899999999999
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
++.
T Consensus 240 ~~~ 242 (323)
T cd05575 240 GAK 242 (323)
T ss_pred CCC
Confidence 985
No 355
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=96.18 E-value=0.002 Score=61.23 Aligned_cols=25 Identities=24% Similarity=0.425 Sum_probs=22.0
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+|+||++++|+++|+.|..
T Consensus 178 ~~~~~Dv~slG~~l~~l~~g~~~~~ 202 (284)
T cd07836 178 YSTSIDIWSVGCIMAEMITGRPLFP 202 (284)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3568899999999999999999864
No 356
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.16 E-value=0.0019 Score=64.90 Aligned_cols=85 Identities=19% Similarity=0.291 Sum_probs=53.0
Q ss_pred CcceeeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHH
Q 010041 423 NSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 502 (519)
Q Consensus 423 n~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~ 502 (519)
|+|++++.....-+-..|+||.|++++-++.|+.|.+.-. .+.....+....-. .+.....++. .+..
T Consensus 183 NYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-------vkety~~Ik~~~Y~--~P~~ls~~A~---dLI~ 250 (592)
T KOG0575|consen 183 NYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-------VKETYNKIKLNEYS--MPSHLSAEAK---DLIR 250 (592)
T ss_pred cccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-------HHHHHHHHHhcCcc--cccccCHHHH---HHHH
Confidence 5677776554444557899999999999999999987310 00001111111100 1112223343 6677
Q ss_pred HhcCCCCCCCCCcccCC
Q 010041 503 ACLSSQPKSRPTMQRIS 519 (519)
Q Consensus 503 ~C~~~~p~~RP~m~~v~ 519 (519)
+-++.+|.+|||.++|.
T Consensus 251 ~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 251 KLLRPNPSERPSLDEVL 267 (592)
T ss_pred HHhcCCcccCCCHHHHh
Confidence 88999999999999874
No 357
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=96.16 E-value=0.0023 Score=62.30 Aligned_cols=70 Identities=17% Similarity=0.359 Sum_probs=43.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||+|++++|+++|+.|...... ............ ..+....+++. .+...|++.+|.+||
T Consensus 177 ~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~--~~~~~~~~~~~---~li~~~l~~~P~~R~ 244 (324)
T cd05587 177 PYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNV--SYPKSLSKEAV---SICKGLLTKHPAKRL 244 (324)
T ss_pred CCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCC--CCCCCCCHHHH---HHHHHHhhcCHHHcC
Confidence 345789999999999999999999752110 000111111111 11122223443 778999999999999
Q ss_pred Cc
Q 010041 514 TM 515 (519)
Q Consensus 514 ~m 515 (519)
+.
T Consensus 245 ~~ 246 (324)
T cd05587 245 GC 246 (324)
T ss_pred CC
Confidence 86
No 358
>PHA03212 serine/threonine kinase US3; Provisional
Probab=96.12 E-value=0.0024 Score=63.92 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=21.7
Q ss_pred eccccccccchhhhhcccccCCCCc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
..+.++|+||+|++++|+++|+.|.
T Consensus 259 ~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 259 PYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 3456899999999999999999874
No 359
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=96.11 E-value=0.0017 Score=63.38 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=42.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|....... .....+...... .+.....++. .+...|++.+|.+||
T Consensus 191 ~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~--~p~~~~~~~~---~li~~~L~~dP~~R~ 258 (329)
T PTZ00263 191 GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-------RIYEKILAGRLK--FPNWFDGRAR---DLVKGLLQTDHTKRL 258 (329)
T ss_pred CCCCcceeechHHHHHHHHcCCCCCCCCCHH-------HHHHHHhcCCcC--CCCCCCHHHH---HHHHHHhhcCHHHcC
Confidence 3457899999999999999999997421110 001111111111 1111123333 789999999999999
Q ss_pred C
Q 010041 514 T 514 (519)
Q Consensus 514 ~ 514 (519)
+
T Consensus 259 ~ 259 (329)
T PTZ00263 259 G 259 (329)
T ss_pred C
Confidence 6
No 360
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=96.09 E-value=0.00043 Score=66.21 Aligned_cols=275 Identities=20% Similarity=0.156 Sum_probs=161.3
Q ss_pred CCEEEEEcCCCceecccCC-CCCCCCCCCcEEECCCCc-cccc-cchhhcCCCCCCEEEcccC-cCCccCCc-cccCCCC
Q 010041 76 GRITDIGLQKSNIKGELGR-LNFSCFPNLQYLDLGSNN-LSGS-IPSQIDSLSNLTYIYLYEN-NLTGTIPK-EIGSLRN 150 (519)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~-~~~~~l~~L~~L~l~~n~-~~~~-~~~~l~~l~~L~~L~L~~n-~~~~~~p~-~~~~l~~ 150 (519)
++..++++.+......-.. .....+|++++|++.++. +++. ....-..|++|++|+|..+ .++...-. .-..+++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 5667777775544331111 123468999999999885 3433 2233356899999999884 44433222 2347899
Q ss_pred CCEEEccCCC-CCcc-CCccccCCCCCCEEEccCCcCcccCchhc----cCCCCCCEEeccCCc-CCCCCCcc-cCCcCc
Q 010041 151 LEVLDLGSNN-LNGT-IPIEIGSVRNLETLSLDGNKLSGTIPIEI----ESLRNLQWLDLSSNK-LSGTIPKE-IGSLRN 222 (519)
Q Consensus 151 L~~L~L~~n~-l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~l----~~l~~L~~L~l~~n~-l~~~~p~~-l~~l~~ 222 (519)
|++|+++.+. +++. +.....++..++.+.+.+|.=.+ ...+ +.+..+.++++..+. ++..--.. -..+..
T Consensus 218 L~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~--le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~ 295 (483)
T KOG4341|consen 218 LKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELE--LEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHA 295 (483)
T ss_pred HHHhhhccCchhhcCcchHHhccchhhhhhhhccccccc--HHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhH
Confidence 9999999884 3331 12234566677777777653211 1122 233456666665553 33221111 134577
Q ss_pred cCeeeCCCCcCCC-cCChhh-ccCCCCceeeccccc-ccCcCcccc-cCCCCcceeeccCccCc--ccCChhccCCCCCC
Q 010041 223 LKELDLSSNKLGG-VLPQEI-ENLKSLTALSMDANN-LGGPIPSTL-FRLTNIEYLSLGFNRFN--GSIPREIVNLKNLT 296 (519)
Q Consensus 223 L~~L~l~~n~l~~-~~p~~l-~~~~~L~~L~l~~n~-l~~~~~~~l-~~~~~L~~L~l~~n~~~--~~~~~~l~~~~~L~ 296 (519)
|+.++.+++...+ ..-..+ .+..+|+.+.+.+++ ++......+ .+++.|+.+++..+... +.+...-.+++.|+
T Consensus 296 lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr 375 (483)
T KOG4341|consen 296 LQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLR 375 (483)
T ss_pred hhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhc
Confidence 8888888765422 222222 456788888888775 333222222 35678888888876542 12222334678899
Q ss_pred EEeccCCcccccC-----CCCCCCCCCCcEEeCcCCcccc-CCchhhcCCCCCCEEECcCCc
Q 010041 297 SLSLGGNKLTGHI-----PSTLGRLTSLQILDLSSNQLHS-SIPLVIGNFSALSYLDLSDNR 352 (519)
Q Consensus 297 ~L~l~~n~l~~~~-----~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~l~~n~ 352 (519)
++.++.+...... ...-..+..|..+.++++.... ..-..+..+++|+.+++-+++
T Consensus 376 ~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 376 VLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred cCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 9998877643221 2223456788889998887653 233456678899998888774
No 361
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.09 E-value=0.0012 Score=67.38 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=22.9
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||+|++++|+++|+.|..
T Consensus 247 ~~~~~~DiwSlGvil~elltG~~pf~ 272 (440)
T PTZ00036 247 NYTTHIDLWSLGCIIAEMILGYPIFS 272 (440)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 35678999999999999999999874
No 362
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=96.09 E-value=0.0029 Score=60.01 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=44.5
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.+.|+||+|++++++++|+.|......... ...+...... .....+....+++. .+...|++.+|++||+
T Consensus 171 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~---~li~~~l~~~p~~R~~ 242 (277)
T cd05577 171 YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE----KEELKRRTLE-MAVEYPDKFSPEAK---DLCEALLQKDPEKRLG 242 (277)
T ss_pred CCchhhhHHHHHHHHHHhhCCCCCCCCccccc----HHHHHhcccc-ccccCCccCCHHHH---HHHHHHccCChhHccC
Confidence 45689999999999999999999753221000 0000000000 00011111223333 7789999999999997
Q ss_pred ccc
Q 010041 515 MQR 517 (519)
Q Consensus 515 m~~ 517 (519)
..|
T Consensus 243 ~~~ 245 (277)
T cd05577 243 CRG 245 (277)
T ss_pred CCc
Confidence 665
No 363
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=96.06 E-value=0.0023 Score=62.44 Aligned_cols=68 Identities=19% Similarity=0.226 Sum_probs=41.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||+|++++|+++|+.|...... ....+.+... ....+.....++. .+...|++.+|++||
T Consensus 171 ~~~~~~DiwslGvil~elltG~~Pf~~~~~--------~~~~~~~~~~-~~~~p~~~~~~~~---~li~~~L~~dP~~R~ 238 (328)
T cd05593 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILME-DIKFPRTLSADAK---SLLSGLLIKDPNKRL 238 (328)
T ss_pred CCCccCCccccchHHHHHhhCCCCCCCCCH--------HHHHHHhccC-CccCCCCCCHHHH---HHHHHHcCCCHHHcC
Confidence 456789999999999999999999752110 0011111000 0011122223444 778899999999998
No 364
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=96.05 E-value=0.0015 Score=62.61 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=42.5
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.++|+||+|++++|+++|+.|...... ............. .+.....++. .+...|++.+|.+||+
T Consensus 175 ~~~~~DiwSlG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~--~~~~~~~~~~---~li~~~l~~dp~~R~~ 242 (291)
T cd05612 175 HNKAVDWWALGILIYEMLVGYPPFFDDNP-------FGIYEKILAGKLE--FPRHLDLYAK---DLIKKLLVVDRTRRLG 242 (291)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCcC--CCccCCHHHH---HHHHHHcCCCHHHccC
Confidence 45789999999999999999999753110 0001111111111 1111123333 7899999999999995
No 365
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=96.05 E-value=0.0024 Score=62.25 Aligned_cols=72 Identities=19% Similarity=0.178 Sum_probs=44.6
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ............. ..+....++. .+...|++.+|.+||
T Consensus 172 ~~~~~~DvwslG~il~el~~G~~pf~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~---~ll~~ll~~~p~~R~ 239 (325)
T cd05604 172 PYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-------AEMYDNILHKPLV--LRPGASLTAW---SILEELLEKDRQRRL 239 (325)
T ss_pred CCCCcCccccccceehhhhcCCCCCCCCCH-------HHHHHHHHcCCcc--CCCCCCHHHH---HHHHHHhccCHHhcC
Confidence 456789999999999999999999752110 0001111111111 1111123333 778999999999999
Q ss_pred Cccc
Q 010041 514 TMQR 517 (519)
Q Consensus 514 ~m~~ 517 (519)
++++
T Consensus 240 ~~~~ 243 (325)
T cd05604 240 GAKE 243 (325)
T ss_pred CCCC
Confidence 8863
No 366
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.04 E-value=0.0049 Score=62.98 Aligned_cols=73 Identities=23% Similarity=0.524 Sum_probs=47.2
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 516 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 516 (519)
...|+||||+...|+.|||.|..-+.+-..... ++ .. -...++.+.+..++.. ...++|-+++|.+||+.+
T Consensus 757 ~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF-kV---Gm--yKvHP~iPeelsaeak---~FilrcFepd~~~R~sA~ 827 (1226)
T KOG4279|consen 757 KAADIWSFGCTMVEMATGRPPFVELGSPQAAMF-KV---GM--YKVHPPIPEELSAEAK---NFILRCFEPDPCDRPSAK 827 (1226)
T ss_pred chhhhhhccceeEeeccCCCCeeecCChhHhhh-hh---cc--eecCCCCcHHHHHHHH---HHHHHHcCCCcccCccHH
Confidence 568999999999999999999753321100000 00 00 0112333444445555 789999999999999988
Q ss_pred cC
Q 010041 517 RI 518 (519)
Q Consensus 517 ~v 518 (519)
+.
T Consensus 828 ~L 829 (1226)
T KOG4279|consen 828 DL 829 (1226)
T ss_pred Hh
Confidence 74
No 367
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=96.02 E-value=0.0032 Score=60.69 Aligned_cols=25 Identities=16% Similarity=0.300 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 181 ~~~~~DiwslG~il~~l~~g~~pf~ 205 (303)
T cd07869 181 YSTCLDMWGVGCIFVEMIQGVAAFP 205 (303)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4567899999999999999999975
No 368
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=95.99 E-value=0.0025 Score=62.25 Aligned_cols=74 Identities=26% Similarity=0.402 Sum_probs=43.3
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhh--hccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+.++|+||||++++|+++|+.|....... .....+.. ....-+.......++. .+...|++ +|.+
T Consensus 185 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~---~li~~ll~-~p~~ 253 (330)
T cd05601 185 TYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-------KTYNNIMNFQRFLKFPEDPKVSSDFL---DLIQSLLC-GQKE 253 (330)
T ss_pred CCCCcceeecccceeeeeccCCCCCCCCCHH-------HHHHHHHcCCCccCCCCCCCCCHHHH---HHHHHHcc-Chhh
Confidence 3457899999999999999999997521110 00111111 0011011111223444 55667787 9999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||++.++
T Consensus 254 R~t~~~l 260 (330)
T cd05601 254 RLGYEGL 260 (330)
T ss_pred CCCHHHH
Confidence 9999875
No 369
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=95.98 E-value=0.0033 Score=60.74 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=22.2
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 182 ~~~~~DiwslG~il~el~tg~~pf~ 206 (309)
T cd07872 182 YSTQIDMWGVGCIFFEMASGRPLFP 206 (309)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999864
No 370
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=95.92 E-value=0.0034 Score=59.98 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 181 ~~~~~DiwslG~~l~~l~~g~~pf~ 205 (288)
T cd07871 181 YSTPIDMWGVGCILYEMATGRPMFP 205 (288)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999998864
No 371
>PHA03207 serine/threonine kinase US3; Provisional
Probab=95.92 E-value=0.0031 Score=63.29 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=22.9
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 263 ~~~~~~DvwslGvil~el~~g~~pf~ 288 (392)
T PHA03207 263 PYCAKTDIWSAGLVLFEMSVKNVTLF 288 (392)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 45678999999999999999999964
No 372
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=95.90 E-value=0.0021 Score=62.67 Aligned_cols=72 Identities=19% Similarity=0.285 Sum_probs=44.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhh-hccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD-QRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++|+.|...... ....+.+. .... .+.....++. .+...|++.+|++|
T Consensus 172 ~~~~~~DiwslG~il~el~tG~~Pf~~~~~--------~~~~~~i~~~~~~--~p~~~~~~~~---~li~~~L~~dP~~R 238 (325)
T cd05594 172 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIR--FPRTLSPEAK---SLLSGLLKKDPKQR 238 (325)
T ss_pred CCCCccccccccceeeeeccCCCCCCCCCH--------HHHHHHHhcCCCC--CCCCCCHHHH---HHHHHHhhcCHHHh
Confidence 456789999999999999999999752110 01111111 1111 1111223444 77889999999999
Q ss_pred C-----CcccC
Q 010041 513 P-----TMQRI 518 (519)
Q Consensus 513 P-----~m~~v 518 (519)
| ++.|+
T Consensus 239 ~~~~~~~~~~i 249 (325)
T cd05594 239 LGGGPDDAKEI 249 (325)
T ss_pred CCCCCCCHHHH
Confidence 7 55554
No 373
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.89 E-value=0.0038 Score=56.84 Aligned_cols=80 Identities=20% Similarity=0.307 Sum_probs=53.2
Q ss_pred ceeeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCC-hhHHHHHHHHHHHHHH
Q 010041 425 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVN-QKIVQDIILVSTIAFA 503 (519)
Q Consensus 425 l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~la~~ 503 (519)
++++.......+.|+||||+|+++.|+..=+.|...- .-..++..+.+.--++++ ....+++. +|+-.
T Consensus 195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--------n~~~L~~KI~qgd~~~~p~~~YS~~l~---~li~~ 263 (375)
T KOG0591|consen 195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--------NLLSLCKKIEQGDYPPLPDEHYSTDLR---ELINM 263 (375)
T ss_pred cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--------cHHHHHHHHHcCCCCCCcHHHhhhHHH---HHHHH
Confidence 3444455566778999999999999999888887521 111233334333233333 33444554 88999
Q ss_pred hcCCCCCCCCCc
Q 010041 504 CLSSQPKSRPTM 515 (519)
Q Consensus 504 C~~~~p~~RP~m 515 (519)
|...+|+.||+.
T Consensus 264 ci~vd~~~RP~t 275 (375)
T KOG0591|consen 264 CIAVDPEQRPDT 275 (375)
T ss_pred HccCCcccCCCc
Confidence 999999999984
No 374
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=95.88 E-value=0.0044 Score=60.27 Aligned_cols=71 Identities=18% Similarity=0.198 Sum_probs=44.1
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|...... ......+...... .+.....++ ..+..+|++.+|.+||
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~--~~~~~~~~~---~~li~~~l~~~p~~R~ 239 (321)
T cd05603 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-------SQMYDNILHKPLQ--LPGGKTVAA---CDLLVGLLHKDQRRRL 239 (321)
T ss_pred CCCCcCcccccchhhhhhhcCCCCCCCCCH-------HHHHHHHhcCCCC--CCCCCCHHH---HHHHHHHccCCHhhcC
Confidence 456789999999999999999999752110 0001111111111 111122333 3889999999999999
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
+..
T Consensus 240 ~~~ 242 (321)
T cd05603 240 GAK 242 (321)
T ss_pred CCC
Confidence 753
No 375
>PHA03209 serine/threonine kinase US3; Provisional
Probab=95.88 E-value=0.002 Score=63.82 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=21.0
Q ss_pred eeccccccccchhhhhcccccCCCCc
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
...+.++|+||||++++|++++..|.
T Consensus 231 ~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 231 DKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred CCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 34567899999999999999866553
No 376
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=95.86 E-value=0.0058 Score=59.77 Aligned_cols=25 Identities=28% Similarity=0.329 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++++++|+.|..
T Consensus 187 ~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 187 YTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred CCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 4568999999999999999998864
No 377
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=95.84 E-value=0.0041 Score=59.08 Aligned_cols=75 Identities=13% Similarity=0.210 Sum_probs=45.1
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC-
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP- 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP- 513 (519)
.+.+.|+||+|++++|+++|+.|....... ................+.....++. .+...|+..+|.+||
T Consensus 173 ~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~s~~~~---~li~~~l~~~p~~R~~ 243 (278)
T cd05606 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTK------DKHEIDRMTLTMAVELPDSFSPELR---SLLEGLLQRDVNRRLG 243 (278)
T ss_pred CCcccchHhHHHHHHHHHhCCCCCCCCCcc------chHHHHHHhhccCCCCCCcCCHHHH---HHHHHHhhcCHHhccC
Confidence 456889999999999999999997532110 0000000011111111111223333 778899999999999
Q ss_pred ----CcccC
Q 010041 514 ----TMQRI 518 (519)
Q Consensus 514 ----~m~~v 518 (519)
++.|+
T Consensus 244 ~~~~~~~~l 252 (278)
T cd05606 244 CLGRGAQEV 252 (278)
T ss_pred CCCCCHHHH
Confidence 77664
No 378
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=95.83 E-value=0.0049 Score=60.54 Aligned_cols=26 Identities=23% Similarity=0.395 Sum_probs=22.6
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||+|++++|+++|+.|..
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 192 HYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred cCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 34568999999999999999999864
No 379
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=95.80 E-value=0.0037 Score=59.02 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=44.8
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCc-chhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI-MLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
..+.++|+||||++++|+++|+.|...... ..... .+........ +......+++. .+...|++.+|.+|
T Consensus 182 ~~~~~~DvwslG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~li~~~l~~~p~~R 252 (267)
T PHA03390 182 NYDVSFDWWAVGVLTYELLTGKHPFKEDED----EELDLESLLKRQQKKL--PFIKNVSKNAN---DFVQSMLKYNINYR 252 (267)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCCCCCc----chhhHHHHHHhhcccC--CcccccCHHHH---HHHHHHhccChhhC
Confidence 345689999999999999999999752110 00000 0001111111 11111223333 77789999999999
Q ss_pred CC-cccC
Q 010041 513 PT-MQRI 518 (519)
Q Consensus 513 P~-m~~v 518 (519)
|+ ++|+
T Consensus 253 ~~~~~~~ 259 (267)
T PHA03390 253 LTNYNEI 259 (267)
T ss_pred CchHHHH
Confidence 95 6765
No 380
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=95.80 E-value=0.002 Score=62.90 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=22.6
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+|+||++++|+++|+.|..
T Consensus 182 ~~~~~~Dv~slG~il~el~tg~~~f~ 207 (328)
T cd07856 182 KYDVEVDIWSAGCIFAEMLEGKPLFP 207 (328)
T ss_pred CcCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 35678999999999999999998864
No 381
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=95.78 E-value=0.004 Score=60.66 Aligned_cols=71 Identities=15% Similarity=0.346 Sum_probs=44.5
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||+|++++|+++|+.|...... ............. .+.....++. .+..+|++.+|.+|+
T Consensus 177 ~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~~--~p~~~~~~~~---~li~~~l~~~p~~R~ 244 (323)
T cd05615 177 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNVS--YPKSLSKEAV---SICKGLMTKHPSKRL 244 (323)
T ss_pred CCCCccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC--CCccCCHHHH---HHHHHHcccCHhhCC
Confidence 356789999999999999999999753211 0001111111111 1122223333 788999999999999
Q ss_pred Ccc
Q 010041 514 TMQ 516 (519)
Q Consensus 514 ~m~ 516 (519)
+..
T Consensus 245 ~~~ 247 (323)
T cd05615 245 GCG 247 (323)
T ss_pred CCC
Confidence 853
No 382
>PHA03211 serine/threonine kinase US3; Provisional
Probab=95.73 E-value=0.0052 Score=62.74 Aligned_cols=26 Identities=23% Similarity=0.230 Sum_probs=21.4
Q ss_pred eeccccccccchhhhhcccccCCCCc
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
...+.+.|+||||++++|+++|..|.
T Consensus 337 ~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 337 DPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred CCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 34567899999999999999887653
No 383
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=95.72 E-value=0.0046 Score=60.29 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=44.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||+|++++|+++|+.|...... ............. .......++. .+...|++.+|.+||
T Consensus 172 ~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~--~~~~~~~~~~---~li~~~l~~~p~~R~ 239 (325)
T cd05602 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEMYDNILNKPLQ--LKPNITNSAR---HLLEGLLQKDRTKRL 239 (325)
T ss_pred CCCCccccccccHHHHHHhcCCCCCCCCCH-------HHHHHHHHhCCcC--CCCCCCHHHH---HHHHHHcccCHHHCC
Confidence 355689999999999999999999752110 0000111111111 1112223444 778899999999999
Q ss_pred Cccc
Q 010041 514 TMQR 517 (519)
Q Consensus 514 ~m~~ 517 (519)
+..+
T Consensus 240 ~~~~ 243 (325)
T cd05602 240 GAKD 243 (325)
T ss_pred CCCC
Confidence 8764
No 384
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=95.59 E-value=0.0034 Score=68.24 Aligned_cols=73 Identities=25% Similarity=0.354 Sum_probs=43.1
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhh-hhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...+.+.|+||||++++|++||+.|...... ......+.. ++....+ ......++ .+++.+|++.+|++
T Consensus 206 ~~~S~kSDIWSLGVILyELLTG~~PF~~~~~------~ki~~~~~i~~P~~~~p-~~~iP~~L---~~LI~rcL~~DP~k 275 (932)
T PRK13184 206 VPASESTDIYALGVILYQMLTLSFPYRRKKG------RKISYRDVILSPIEVAP-YREIPPFL---SQIAMKALAVDPAE 275 (932)
T ss_pred CCCCcHhHHHHHHHHHHHHHHCCCCCCCcch------hhhhhhhhccChhhccc-cccCCHHH---HHHHHHHccCChhh
Confidence 3456789999999999999999999753110 000000100 1000000 01112233 37899999999999
Q ss_pred CCCc
Q 010041 512 RPTM 515 (519)
Q Consensus 512 RP~m 515 (519)
||+.
T Consensus 276 R~ss 279 (932)
T PRK13184 276 RYSS 279 (932)
T ss_pred CcCH
Confidence 9753
No 385
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.57 E-value=0.007 Score=59.54 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=57.0
Q ss_pred cceeeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHH
Q 010041 424 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 503 (519)
Q Consensus 424 ~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~ 503 (519)
++.+++-.......|.|+||+|+++.|+.+-+.++..... ..+...+-+....+.+.....++. .+.-.
T Consensus 172 YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~~~~Plp~~ys~el~---~lv~~ 240 (426)
T KOG0589|consen 172 YMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRGLYSPLPSMYSSELR---SLVKS 240 (426)
T ss_pred ccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhccCCCCCccccHHHH---HHHHH
Confidence 3445555556677899999999999999998888753211 112222223333344444445555 77899
Q ss_pred hcCCCCCCCCCcccCC
Q 010041 504 CLSSQPKSRPTMQRIS 519 (519)
Q Consensus 504 C~~~~p~~RP~m~~v~ 519 (519)
|+..+|+.||+..|++
T Consensus 241 ~l~~~P~~RPsa~~LL 256 (426)
T KOG0589|consen 241 MLRKNPEHRPSALELL 256 (426)
T ss_pred HhhcCCccCCCHHHHh
Confidence 9999999999988763
No 386
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=95.52 E-value=0.0043 Score=60.86 Aligned_cols=73 Identities=16% Similarity=0.184 Sum_probs=44.9
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.++|+||||++++|+++|+.|...... ............. .+....+++. .+...|++.+|++|+
T Consensus 204 ~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~--~p~~~~~~~~---~li~~~l~~dp~~R~ 271 (340)
T PTZ00426 204 GHGKAADWWTLGIFIYEILVGCPPFYANEP-------LLIYQKILEGIIY--FPKFLDNNCK---HLMKKLLSHDLTKRY 271 (340)
T ss_pred CCCccccccchhhHHHHHhcCCCCCCCCCH-------HHHHHHHhcCCCC--CCCCCCHHHH---HHHHHHcccCHHHcC
Confidence 345689999999999999999999753211 0001111111111 1111223343 778899999999995
Q ss_pred -----CcccC
Q 010041 514 -----TMQRI 518 (519)
Q Consensus 514 -----~m~~v 518 (519)
+++|+
T Consensus 272 ~~~~~~~~~~ 281 (340)
T PTZ00426 272 GNLKKGAQNV 281 (340)
T ss_pred CCCCCCHHHH
Confidence 66654
No 387
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=95.52 E-value=0.01 Score=53.92 Aligned_cols=73 Identities=22% Similarity=0.430 Sum_probs=46.2
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCc-chhhhhhhccCCCCChh--HHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI-MLINVLDQRLSPPVNQK--IVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~--~~~~~~~~~~la~~C~~~~p~ 510 (519)
+...+.||||||+.+.|+.||+-|+..... +. .+..+++ ...+..+.. ...+.. ++...|++.|+.
T Consensus 270 kYDiRaDVWSlGITlveLaTg~yPy~~c~t-------dFe~ltkvln-~ePP~L~~~~gFSp~F~---~fv~~CL~kd~r 338 (391)
T KOG0983|consen 270 KYDIRADVWSLGITLVELATGQYPYKGCKT-------DFEVLTKVLN-EEPPLLPGHMGFSPDFQ---SFVKDCLTKDHR 338 (391)
T ss_pred ccchhhhhhhhccchhhhhcccCCCCCCCc-------cHHHHHHHHh-cCCCCCCcccCcCHHHH---HHHHHHhhcCcc
Confidence 455689999999999999999999874221 11 1112222 111211111 123333 778999999999
Q ss_pred CCCCccc
Q 010041 511 SRPTMQR 517 (519)
Q Consensus 511 ~RP~m~~ 517 (519)
+||.-.+
T Consensus 339 ~RP~Y~~ 345 (391)
T KOG0983|consen 339 KRPKYNK 345 (391)
T ss_pred cCcchHH
Confidence 9997554
No 388
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=95.45 E-value=0.0066 Score=60.35 Aligned_cols=74 Identities=24% Similarity=0.340 Sum_probs=45.1
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhc--cCCCCChhHHHHHHHHHHHHHHhcCCCCCC-
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQR--LSPPVNQKIVQDIILVSTIAFACLSSQPKS- 511 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~la~~C~~~~p~~- 511 (519)
.+.++|+||||++++|+++|+.|...... ........+.. +.-+.......++. .+...|++.+|++
T Consensus 224 ~~~~~DiwSlGvilyelltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~s~~~~---~li~~~L~~~p~r~ 293 (370)
T cd05596 224 YGRECDWWSVGVFLYEMLVGDTPFYADSL-------VGTYSKIMDHKNSLTFPDDIEISKQAK---DLICAFLTDREVRL 293 (370)
T ss_pred CCCceeeeehhHHHHHHHhCCCCcCCCCH-------HHHHHHHHcCCCcCCCCCcCCCCHHHH---HHHHHHccChhhcc
Confidence 45789999999999999999999753111 00111111111 11111111223444 6788899888887
Q ss_pred -CCCcccC
Q 010041 512 -RPTMQRI 518 (519)
Q Consensus 512 -RP~m~~v 518 (519)
||++.|+
T Consensus 294 ~R~s~~el 301 (370)
T cd05596 294 GRNGVDEI 301 (370)
T ss_pred CCCCHHHH
Confidence 9999876
No 389
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=95.44 E-value=0.0068 Score=63.54 Aligned_cols=72 Identities=19% Similarity=0.345 Sum_probs=49.7
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
....+|.|+|++||+++.+....+|++.-..+ .+++..-.-+..+...+.+. .|...|++.+|++|
T Consensus 233 ~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-----------aIlng~Y~~P~~p~ys~~l~---~LI~~mL~~nP~~R 298 (738)
T KOG1989|consen 233 LPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-----------AILNGNYSFPPFPNYSDRLK---DLIRTMLQPNPDER 298 (738)
T ss_pred CCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-----------eEEeccccCCCCccHHHHHH---HHHHHHhccCcccC
Confidence 35678999999999999999999998742211 11221111122222334444 88999999999999
Q ss_pred CCcccC
Q 010041 513 PTMQRI 518 (519)
Q Consensus 513 P~m~~v 518 (519)
|++-+|
T Consensus 299 PnI~Qv 304 (738)
T KOG1989|consen 299 PNIYQV 304 (738)
T ss_pred CCHHHH
Confidence 998876
No 390
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.44 E-value=0.007 Score=56.89 Aligned_cols=74 Identities=18% Similarity=0.259 Sum_probs=44.3
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|....... ....+.......+..+....+++. .+...|+. .|..||
T Consensus 185 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~p~~~~~~~~---~~i~~~l~-~~~~r~ 253 (264)
T cd06653 185 GYGRKADVWSVACTVVEMLTEKPPWAEYEAM-------AAIFKIATQPTKPMLPDGVSDACR---DFLKQIFV-EEKRRP 253 (264)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCccCHH-------HHHHHHHcCCCCCCCCcccCHHHH---HHHHHHhc-CcccCc
Confidence 3456899999999999999999997532110 011111111111112222223443 77888888 579999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
+..++
T Consensus 254 ~~~~~ 258 (264)
T cd06653 254 TAEFL 258 (264)
T ss_pred cHHHH
Confidence 97754
No 391
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.19 E-value=0.005 Score=62.14 Aligned_cols=75 Identities=17% Similarity=0.326 Sum_probs=46.3
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC-CChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP-VNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
-...+..||||||+.++|++|+.-|+.-...-+ .+=..|-.++.+. .....-.++. ++...|+.. .++
T Consensus 218 E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A-------QIYKKV~SGiKP~sl~kV~dPevr---~fIekCl~~-~~~ 286 (632)
T KOG0584|consen 218 ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA-------QIYKKVTSGIKPAALSKVKDPEVR---EFIEKCLAT-KSE 286 (632)
T ss_pred hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH-------HHHHHHHcCCCHHHhhccCCHHHH---HHHHHHhcC-chh
Confidence 456788999999999999999999985321100 0001111222211 0000012444 889999999 999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
|||..|.
T Consensus 287 R~sa~eL 293 (632)
T KOG0584|consen 287 RLSAKEL 293 (632)
T ss_pred ccCHHHH
Confidence 9998774
No 392
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=95.15 E-value=0.0089 Score=57.09 Aligned_cols=72 Identities=22% Similarity=0.295 Sum_probs=41.9
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
.+.+.|+||||++++|+++|+.|...... ........+.+... .++.+......+ ..+...|++.+|++||+
T Consensus 185 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 185 HDKAVDWWSMGVLMYELLTGASPFTVDGE----KNSQAEISRRILKS-EPPYPQEMSALA---KDIIQRLLMKDPKKRLG 256 (290)
T ss_pred CCccccHHHHHHHHHHHhcCCCCCCcCCc----cccHHHHHHHhhcc-CCCCCccCCHHH---HHHHHHHhcCCHHHhcC
Confidence 34679999999999999999999752110 00000011111111 111122222233 38899999999999983
No 393
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.13 E-value=0.0085 Score=32.09 Aligned_cols=12 Identities=58% Similarity=0.872 Sum_probs=5.6
Q ss_pred CCEEEccCCcCc
Q 010041 175 LETLSLDGNKLS 186 (519)
Q Consensus 175 L~~L~L~~n~l~ 186 (519)
|++|++++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 444444444444
No 394
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=95.05 E-value=0.011 Score=58.07 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=22.1
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.+.|+||||++++|+++|+.|..
T Consensus 195 ~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 195 YNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999874
No 395
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.02 E-value=0.0088 Score=32.04 Aligned_cols=11 Identities=55% Similarity=0.700 Sum_probs=4.3
Q ss_pred CEEEcccCcCC
Q 010041 128 TYIYLYENNLT 138 (519)
Q Consensus 128 ~~L~L~~n~~~ 138 (519)
++|+|++|+++
T Consensus 3 ~~Ldls~n~l~ 13 (22)
T PF00560_consen 3 EYLDLSGNNLT 13 (22)
T ss_dssp SEEEETSSEES
T ss_pred cEEECCCCcCE
Confidence 33333333333
No 396
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=94.97 E-value=0.0092 Score=57.02 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=42.4
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
..+.+.|+||||++++|+++|+.|...... ............ ..+.....++. .+...|++.+|.+||
T Consensus 174 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~l~---~li~~~l~~~p~~R~ 241 (290)
T cd05580 174 GYGKAVDWWALGILIYEMLAGYPPFFDDNP-------IQIYEKILEGKV--RFPSFFSPDAK---DLIRNLLQVDLTKRL 241 (290)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCc--cCCccCCHHHH---HHHHHHccCCHHHcc
Confidence 345689999999999999999999652210 001111111111 11112223333 778999999999999
Q ss_pred C
Q 010041 514 T 514 (519)
Q Consensus 514 ~ 514 (519)
+
T Consensus 242 ~ 242 (290)
T cd05580 242 G 242 (290)
T ss_pred C
Confidence 3
No 397
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=94.80 E-value=0.013 Score=64.32 Aligned_cols=71 Identities=23% Similarity=0.393 Sum_probs=46.0
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 516 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 516 (519)
...||||+|+|.+|+.||+.|...+. .++.+.--|..+-.++.+.....+-. ..--.|++.||+.|.+..
T Consensus 1420 ~A~DiWslGCVVlEM~tGkrPW~~~d-------ne~aIMy~V~~gh~Pq~P~~ls~~g~---dFle~Cl~~dP~~Rw~~~ 1489 (1509)
T KOG4645|consen 1420 GAADIWSLGCVVLEMATGKRPWAELD-------NEWAIMYHVAAGHKPQIPERLSSEGR---DFLEHCLEQDPKMRWTAS 1489 (1509)
T ss_pred cchhhhcccceEEEeecCCCchhhcc-------chhHHHhHHhccCCCCCchhhhHhHH---HHHHHHHhcCchhhhHHH
Confidence 35799999999999999999986433 12222222222223333333333333 667899999999997764
Q ss_pred c
Q 010041 517 R 517 (519)
Q Consensus 517 ~ 517 (519)
|
T Consensus 1490 q 1490 (1509)
T KOG4645|consen 1490 Q 1490 (1509)
T ss_pred H
Confidence 4
No 398
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=94.73 E-value=0.013 Score=58.64 Aligned_cols=26 Identities=38% Similarity=0.640 Sum_probs=23.1
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||||++++|+++|+.|..
T Consensus 224 ~~~~~~DiwSlG~il~elltG~~Pf~ 249 (381)
T cd05626 224 GYTQLCDWWSVGVILFEMLVGQPPFL 249 (381)
T ss_pred CCCCccceeehhhHHHHHHhCCCCCc
Confidence 34568999999999999999999975
No 399
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.66 E-value=0.019 Score=57.35 Aligned_cols=75 Identities=19% Similarity=0.333 Sum_probs=46.1
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
...|.||||+|++++|++-|+.|+-.-..+.... .+...-.+.+.. +.....+.. ..-.+|++.|+++||+
T Consensus 446 YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly----LIa~ng~P~lk~--~~klS~~~k---dFL~~cL~~dv~~Ras 516 (550)
T KOG0578|consen 446 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY----LIATNGTPKLKN--PEKLSPELK---DFLDRCLVVDVEQRAS 516 (550)
T ss_pred cCccccchhhhhHHHHHhcCCCCccCCChHHHHH----HHhhcCCCCcCC--ccccCHHHH---HHHHHHhhcchhcCCC
Confidence 3468999999999999999999985321110000 000000111111 122223444 7788999999999999
Q ss_pred cccC
Q 010041 515 MQRI 518 (519)
Q Consensus 515 m~~v 518 (519)
..|.
T Consensus 517 A~eL 520 (550)
T KOG0578|consen 517 AKEL 520 (550)
T ss_pred HHHH
Confidence 8875
No 400
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=94.37 E-value=0.044 Score=52.82 Aligned_cols=72 Identities=22% Similarity=0.306 Sum_probs=45.4
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhh-hhcc--CCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL-DQRL--SPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~-d~~~--~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.|+||+|++++-.++|..|...- .....+.+.+ ..+. .++...+..++.. .+.-+.+..+|++||
T Consensus 360 ~kVDiWSlGcvLfvcLsG~pPFS~~-------~~~~sl~eQI~~G~y~f~p~~w~~Iseea~---dlI~~mL~VdP~~R~ 429 (475)
T KOG0615|consen 360 SKVDIWSLGCVLFVCLSGYPPFSEE-------YTDPSLKEQILKGRYAFGPLQWDRISEEAL---DLINWMLVVDPENRP 429 (475)
T ss_pred chheeeeccceEEEEeccCCCcccc-------cCCccHHHHHhcCcccccChhhhhhhHHHH---HHHHHhhEeCcccCc
Confidence 5889999999999999999997521 1111111111 1111 1111122233443 778899999999999
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
|..|+
T Consensus 430 s~~ea 434 (475)
T KOG0615|consen 430 SADEA 434 (475)
T ss_pred CHHHH
Confidence 99886
No 401
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=94.36 E-value=0.014 Score=57.27 Aligned_cols=25 Identities=28% Similarity=0.489 Sum_probs=22.3
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++++++|+.|..
T Consensus 193 ~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 193 YTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999974
No 402
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=94.33 E-value=0.014 Score=61.17 Aligned_cols=85 Identities=12% Similarity=0.179 Sum_probs=44.3
Q ss_pred eccccccccchhhhhcccccCCCCcccc-ccc----ccCCCCCcchhhhhhhccCCCCCh--hHH-HHHHHHHHHHHHhc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELL-SSL----SSSSGPKIMLINVLDQRLSPPVNQ--KIV-QDIILVSTIAFACL 505 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~-~~~----~~~~~~~~~~~~~~d~~~~~~~~~--~~~-~~~~~~~~la~~C~ 505 (519)
....++||||||++++|++++..|.+.. ..+ .............+.+...+.... +.. .+-....++...|+
T Consensus 355 ~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 355 NLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 3457889999999999999988775421 000 000000000111111111100000 000 00001226889999
Q ss_pred CCCCCCCCCcccC
Q 010041 506 SSQPKSRPTMQRI 518 (519)
Q Consensus 506 ~~~p~~RP~m~~v 518 (519)
+.+|++|||+.|+
T Consensus 435 ~~dP~kR~ta~e~ 447 (566)
T PLN03225 435 RFKGRQRISAKAA 447 (566)
T ss_pred cCCcccCCCHHHH
Confidence 9999999999886
No 403
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=94.19 E-value=0.014 Score=57.77 Aligned_cols=26 Identities=35% Similarity=0.580 Sum_probs=23.2
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 212 ~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 212 GYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred CCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 35678999999999999999999975
No 404
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=94.15 E-value=0.03 Score=53.40 Aligned_cols=31 Identities=23% Similarity=0.501 Sum_probs=25.0
Q ss_pred eeeeecceeccccccccchhhhhcccccCCC
Q 010041 426 NGKLAHTMVVTEKCDVYSFGVVALEILMGRH 456 (519)
Q Consensus 426 ~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~ 456 (519)
.+++.-....+..|||||+|+++.|+.||..
T Consensus 277 APEViLgLGwS~pCDvWSiGCIL~ElytG~~ 307 (415)
T KOG0671|consen 277 APEVILGLGWSQPCDVWSIGCILVELYTGET 307 (415)
T ss_pred CchheeccCcCCccCceeeeeEEEEeeccce
Confidence 4455555667789999999999999999885
No 405
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=93.94 E-value=0.02 Score=51.86 Aligned_cols=76 Identities=21% Similarity=0.289 Sum_probs=47.2
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhh---hccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
...++||||+|+.+.|+.||+.|+.-+.+. -..++.++. +.+.. +.+..+-...+....-.|+..+-++
T Consensus 246 yDiRSDvWSLGITL~EvAtG~fPyr~w~sv------feql~~Vv~gdpp~l~~--~~~~~~~s~~~~~fintCl~Kd~~~ 317 (361)
T KOG1006|consen 246 YDIRSDVWSLGITLYEVATGNFPYRKWDSV------FEQLCQVVIGDPPILLF--DKECVHYSFSMVRFINTCLIKDRSD 317 (361)
T ss_pred cchhhhhhhhcceEeeeecCCCCcchHHHH------HHHHHHHHcCCCCeecC--cccccccCHHHHHHHHHHhhccccc
Confidence 456899999999999999999998643221 011223321 11111 1221121223447788999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||...+.
T Consensus 318 Rpky~~L 324 (361)
T KOG1006|consen 318 RPKYDDL 324 (361)
T ss_pred Ccchhhh
Confidence 9987653
No 406
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.69 E-value=0.042 Score=54.25 Aligned_cols=71 Identities=21% Similarity=0.330 Sum_probs=45.6
Q ss_pred cccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhH-HHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 436 TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKI-VQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 436 ~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
..+.||||+|++++.+++|+.|.+.-. .+ .....+..... .++... ..++. .+..+|+..+|..|++
T Consensus 201 g~~aDvWS~GViLy~ml~G~~PF~d~~------~~-~l~~ki~~~~~--~~p~~~~S~~~~---~Li~~mL~~~P~~R~t 268 (370)
T KOG0583|consen 201 GKAADVWSLGVILYVLLCGRLPFDDSN------VP-NLYRKIRKGEF--KIPSYLLSPEAR---SLIEKMLVPDPSTRIT 268 (370)
T ss_pred CchhhhhhhHHHHHHHHhCCCCCCCcc------HH-HHHHHHhcCCc--cCCCCcCCHHHH---HHHHHHcCCCcccCCC
Confidence 358999999999999999999987411 00 00001111111 111111 23444 7899999999999999
Q ss_pred cccC
Q 010041 515 MQRI 518 (519)
Q Consensus 515 m~~v 518 (519)
+.||
T Consensus 269 ~~~i 272 (370)
T KOG0583|consen 269 LLEI 272 (370)
T ss_pred HHHH
Confidence 9886
No 407
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=93.65 E-value=0.017 Score=57.63 Aligned_cols=26 Identities=38% Similarity=0.615 Sum_probs=23.1
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+||||++++|+++|+.|..
T Consensus 220 ~~~~~~DiwSlGvilyell~G~~Pf~ 245 (376)
T cd05598 220 GYTQLCDWWSVGVILYEMLVGQPPFL 245 (376)
T ss_pred CCCcceeeeeccceeeehhhCCCCCC
Confidence 34578999999999999999999975
No 408
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.22 E-value=0.00098 Score=67.55 Aligned_cols=185 Identities=28% Similarity=0.310 Sum_probs=86.5
Q ss_pred CCEEeccCCcCCCCCCc----ccCCcCccCeeeCCCCcCCCcCChhh----ccC-CCCceeecccccccCcCcccccCCC
Q 010041 199 LQWLDLSSNKLSGTIPK----EIGSLRNLKELDLSSNKLGGVLPQEI----ENL-KSLTALSMDANNLGGPIPSTLFRLT 269 (519)
Q Consensus 199 L~~L~l~~n~l~~~~p~----~l~~l~~L~~L~l~~n~l~~~~p~~l----~~~-~~L~~L~l~~n~l~~~~~~~l~~~~ 269 (519)
+..+.+.+|.+...... .+.....|+.|++++|.+.+.--..+ ... ..++.|++..|.+++...
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~------- 161 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGA------- 161 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccch-------
Confidence 67777777777654322 33455667777777776653211111 111 233444444444332211
Q ss_pred CcceeeccCccCcccCChhccCCCCCCEEeccCCcccc----cCCCCC----CCCCCCcEEeCcCCccccCC----chhh
Q 010041 270 NIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTG----HIPSTL----GRLTSLQILDLSSNQLHSSI----PLVI 337 (519)
Q Consensus 270 ~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~l~~----~~~~~l----~~l~~L~~L~l~~n~l~~~~----~~~~ 337 (519)
+.+...+.....++.++++.|.+.. .++..+ ....++++|++++|.++... ...+
T Consensus 162 -------------~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l 228 (478)
T KOG4308|consen 162 -------------APLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVL 228 (478)
T ss_pred -------------HHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHH
Confidence 0122233334445555555554421 111112 23455666666666654211 1122
Q ss_pred cCCCC-CCEEECcCCcCccc----CCCCCCCC-CCCcEEEccCccCcccc----chhhhcccCCCEEEccCCcccc
Q 010041 338 GNFSA-LSYLDLSDNRICGI----IPDELTKL-SHLKYLNLSSNLLSGQI----PFAIGKLFNLASLDLSKNKLSG 403 (519)
Q Consensus 338 ~~~~~-L~~L~l~~n~l~~~----~~~~~~~l-~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~L~l~~n~l~~ 403 (519)
...+. +..|++..|.+.+. ....+..+ ..+++++++.|.+++.- ...+..++.++++.+++|.+.+
T Consensus 229 ~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 229 ASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 33333 44466666665532 11222333 45566666666665432 2334445566666666666654
No 409
>PHA03210 serine/threonine kinase US3; Provisional
Probab=93.07 E-value=0.051 Score=56.39 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=20.4
Q ss_pred eccccccccchhhhhcccccCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHP 457 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p 457 (519)
..+.+.|+||||++++|+++|..+
T Consensus 344 ~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 344 GYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCC
Confidence 456789999999999999998753
No 410
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=93.03 E-value=0.031 Score=55.43 Aligned_cols=26 Identities=35% Similarity=0.611 Sum_probs=23.1
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 215 ~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 215 GYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred CCCCeeeeecchhHHHHhhcCCCCCC
Confidence 34678999999999999999999975
No 411
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=93.02 E-value=0.032 Score=55.74 Aligned_cols=26 Identities=38% Similarity=0.615 Sum_probs=23.0
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||+|++++|+++|+.|..
T Consensus 224 ~~~~~~DiwSlGvil~elltG~~Pf~ 249 (382)
T cd05625 224 GYTQLCDWWSVGVILYEMLVGQPPFL 249 (382)
T ss_pred CCCCeeeEEechHHHHHHHhCCCCCC
Confidence 34568999999999999999999975
No 412
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=92.91 E-value=0.00056 Score=69.31 Aligned_cols=136 Identities=28% Similarity=0.304 Sum_probs=89.7
Q ss_pred CCCCEEeccCCccccc----CCCCCCCCCCCcEEeCcCCcccc----CCchhhc----CCCCCCEEECcCCcCcccC---
Q 010041 293 KNLTSLSLGGNKLTGH----IPSTLGRLTSLQILDLSSNQLHS----SIPLVIG----NFSALSYLDLSDNRICGII--- 357 (519)
Q Consensus 293 ~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~----~~~~~~~----~~~~L~~L~l~~n~l~~~~--- 357 (519)
..++.|++..|.++.. +...+....+++.++++.|.+.. .++..+. ...++++|.+++|.++...
T Consensus 144 ~~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~ 223 (478)
T KOG4308|consen 144 CLLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCAL 223 (478)
T ss_pred HHHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHH
Confidence 3455566666665532 34456668899999999998742 1222233 3667888999998876321
Q ss_pred -CCCCCCCCC-CcEEEccCccCcccc----chhhhcc-cCCCEEEccCCccccccc----cccccCCCCCEEEccCCcce
Q 010041 358 -PDELTKLSH-LKYLNLSSNLLSGQI----PFAIGKL-FNLASLDLSKNKLSGSIP----TEIGNCSELRNLTLNHNSLN 426 (519)
Q Consensus 358 -~~~~~~l~~-L~~L~l~~n~l~~~~----~~~~~~~-~~L~~L~l~~n~l~~~~~----~~l~~l~~L~~L~l~~n~l~ 426 (519)
...+...+. +..+++.+|.+.+.. ...+..+ ..++.++++.|.+++... ..+..++.++.+.++.|++.
T Consensus 224 l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 224 LDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 122344444 667899999887542 2334444 577899999999887543 44556778999999999886
Q ss_pred ee
Q 010041 427 GK 428 (519)
Q Consensus 427 ~~ 428 (519)
..
T Consensus 304 ~~ 305 (478)
T KOG4308|consen 304 DY 305 (478)
T ss_pred cH
Confidence 54
No 413
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=92.91 E-value=0.049 Score=54.16 Aligned_cols=25 Identities=36% Similarity=0.610 Sum_probs=22.8
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 224 ~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 224 YGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred CCCccceeehhHHHHHHHhCCCCCC
Confidence 4578999999999999999999975
No 414
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=92.69 E-value=0.057 Score=53.66 Aligned_cols=25 Identities=36% Similarity=0.636 Sum_probs=22.7
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||+|++++|+++|+.|..
T Consensus 224 ~~~~~DiwSlG~ilyell~G~~Pf~ 248 (370)
T cd05621 224 YGRECDWWSVGVFLFEMLVGDTPFY 248 (370)
T ss_pred CCcccCEEeehHHHHHHHhCCCCCC
Confidence 4578999999999999999999975
No 415
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=92.61 E-value=0.062 Score=52.48 Aligned_cols=25 Identities=36% Similarity=0.614 Sum_probs=22.6
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 185 ~~~~~DvwSlGvil~ell~g~~Pf~ 209 (332)
T cd05623 185 YGPECDWWSLGVCMYEMLYGETPFY 209 (332)
T ss_pred CCCcCCEEeeHHHHHHHhcCCCCCC
Confidence 4568999999999999999999975
No 416
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=92.59 E-value=0.05 Score=53.81 Aligned_cols=26 Identities=35% Similarity=0.580 Sum_probs=23.1
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 212 ~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 212 GYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred CCCCcceeccccceeeecccCCCCCC
Confidence 45678999999999999999999975
No 417
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=92.48 E-value=0.047 Score=59.76 Aligned_cols=72 Identities=24% Similarity=0.401 Sum_probs=43.7
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC---CChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP---VNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
+.++|.|.||+|++++|++.- .+..+-+ ...+.+..+..++.+ ..+..+++ .++..+-++.+|.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~yP-F~TsMER--------a~iL~~LR~g~iP~~~~f~~~~~~~e----~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLYP-FGTSMER--------ASILTNLRKGSIPEPADFFDPEHPEE----ASLIRWLLSHDPS 860 (1351)
T ss_pred cccchhhhHHHHHHHHHHhcc-CCchHHH--------HHHHHhcccCCCCCCcccccccchHH----HHHHHHHhcCCCc
Confidence 578899999999999999864 3332111 001111112222222 12222223 3778899999999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+|||..|+
T Consensus 861 kRPtA~eL 868 (1351)
T KOG1035|consen 861 KRPTATEL 868 (1351)
T ss_pred cCCCHHHH
Confidence 99998875
No 418
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=91.99 E-value=0.086 Score=51.47 Aligned_cols=25 Identities=36% Similarity=0.614 Sum_probs=22.5
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 185 ~~~~~DiwslG~~l~el~~g~~Pf~ 209 (331)
T cd05597 185 YGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred CCCcceeehhhhHHHHHhhCCCCCC
Confidence 4568999999999999999999975
No 419
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=91.77 E-value=0.067 Score=52.25 Aligned_cols=25 Identities=36% Similarity=0.614 Sum_probs=22.5
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.+.++|+||||++++|+++|+.|..
T Consensus 185 ~~~~~DiwSlGvil~ell~g~~Pf~ 209 (331)
T cd05624 185 YGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred CCCcccEEeeehhhhhhhhCCCCcc
Confidence 4568999999999999999999975
No 420
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=91.63 E-value=0.057 Score=53.79 Aligned_cols=26 Identities=31% Similarity=0.548 Sum_probs=23.1
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.++|+||||++++|+++|+.|..
T Consensus 224 ~~~~~~DiwSlGvil~elltG~~Pf~ 249 (377)
T cd05629 224 GYGQECDWWSLGAIMFECLIGWPPFC 249 (377)
T ss_pred CCCCceeeEecchhhhhhhcCCCCCC
Confidence 35678999999999999999999974
No 421
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=91.51 E-value=0.077 Score=53.05 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=45.5
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcc-hhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIM-LINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
...+...+|+|+|||++++++.|+.|.-... +.. ...+++- .-+.++...+.+. .|.-.-+..+|.
T Consensus 261 ~~~~~~~sDiWAlGCilyQmlaG~PPFra~N--------eyliFqkI~~l--~y~fp~~fp~~a~---dLv~KLLv~dp~ 327 (604)
T KOG0592|consen 261 DSPAGPSSDLWALGCILYQMLAGQPPFRAAN--------EYLIFQKIQAL--DYEFPEGFPEDAR---DLIKKLLVRDPS 327 (604)
T ss_pred CCCCCcccchHHHHHHHHHHhcCCCCCcccc--------HHHHHHHHHHh--cccCCCCCCHHHH---HHHHHHHccCcc
Confidence 3445678999999999999999999974211 111 1111111 1112222233444 556666788999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+|++.+|+
T Consensus 328 ~Rlt~~qI 335 (604)
T KOG0592|consen 328 DRLTSQQI 335 (604)
T ss_pred ccccHHHH
Confidence 99998775
No 422
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.29 E-value=0.14 Score=52.65 Aligned_cols=76 Identities=20% Similarity=0.228 Sum_probs=51.1
Q ss_pred eeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC--CChhHHHHHHHHHHHHHHh
Q 010041 427 GKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP--VNQKIVQDIILVSTIAFAC 504 (519)
Q Consensus 427 ~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~la~~C 504 (519)
+++......+...|.|+|||+++|++.|+-|...- . -.+++|..+.+. ++.....|.+ .|..+-
T Consensus 537 PEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd-------d----Eee~FdsI~~d~~~yP~~ls~ea~---~il~~l 602 (694)
T KOG0694|consen 537 PEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD-------D----EEEVFDSIVNDEVRYPRFLSKEAI---AIMRRL 602 (694)
T ss_pred hhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC-------C----HHHHHHHHhcCCCCCCCcccHHHH---HHHHHH
Confidence 34455566778899999999999999999997621 1 113333333222 2333344554 778888
Q ss_pred cCCCCCCCCCcc
Q 010041 505 LSSQPKSRPTMQ 516 (519)
Q Consensus 505 ~~~~p~~RP~m~ 516 (519)
...+|++|--+.
T Consensus 603 l~k~p~kRLG~~ 614 (694)
T KOG0694|consen 603 LRKNPEKRLGSG 614 (694)
T ss_pred hccCcccccCCC
Confidence 999999998773
No 423
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=91.10 E-value=0.2 Score=48.50 Aligned_cols=81 Identities=22% Similarity=0.259 Sum_probs=49.5
Q ss_pred cceeeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHH
Q 010041 424 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 503 (519)
Q Consensus 424 ~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~ 503 (519)
++.+++.....-....|.|+|||.++|++.|+.|..- ...+..+.+++.+.+.=+..+....++. .+...
T Consensus 301 YlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG-------~~~~~Tl~NIv~~~l~Fp~~~~vs~~ak---DLIr~ 370 (459)
T KOG0610|consen 301 YLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKG-------SNNKETLRNIVGQPLKFPEEPEVSSAAK---DLIRK 370 (459)
T ss_pred cccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCC-------CCchhhHHHHhcCCCcCCCCCcchhHHH---HHHHH
Confidence 3445555444445678999999999999999999752 2223334455544433222222222333 56667
Q ss_pred hcCCCCCCCCC
Q 010041 504 CLSSQPKSRPT 514 (519)
Q Consensus 504 C~~~~p~~RP~ 514 (519)
-+..||.+|-.
T Consensus 371 LLvKdP~kRlg 381 (459)
T KOG0610|consen 371 LLVKDPSKRLG 381 (459)
T ss_pred HhccChhhhhc
Confidence 77888888864
No 424
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=91.10 E-value=0.092 Score=46.70 Aligned_cols=23 Identities=22% Similarity=0.442 Sum_probs=19.9
Q ss_pred HHHHHHHhcCCCCCCCCCcccCC
Q 010041 497 VSTIAFACLSSQPKSRPTMQRIS 519 (519)
Q Consensus 497 ~~~la~~C~~~~p~~RP~m~~v~ 519 (519)
+.++...|++.+|++||++.+++
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~ 212 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEIL 212 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHh
Confidence 44889999999999999998863
No 425
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=89.63 E-value=0.18 Score=51.81 Aligned_cols=70 Identities=21% Similarity=0.294 Sum_probs=44.6
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 516 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 516 (519)
.+.||||=||+++-++||+.|.+.-. -..+...|..+.=.. +.....++. .+-.+.+..||+.|-||+
T Consensus 191 ~~sDVWSCGVILfALLtG~LPFdDdN--------ir~LLlKV~~G~f~M-Ps~Is~eaQ---dLLr~ml~VDp~~RiT~~ 258 (786)
T KOG0588|consen 191 RPSDVWSCGVILFALLTGKLPFDDDN--------IRVLLLKVQRGVFEM-PSNISSEAQ---DLLRRMLDVDPSTRITTE 258 (786)
T ss_pred CccccchhHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcCcccC-CCcCCHHHH---HHHHHHhccCccccccHH
Confidence 47899999999999999999987210 011222222221111 112223444 566777889999999999
Q ss_pred cC
Q 010041 517 RI 518 (519)
Q Consensus 517 ~v 518 (519)
||
T Consensus 259 eI 260 (786)
T KOG0588|consen 259 EI 260 (786)
T ss_pred HH
Confidence 87
No 426
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=89.31 E-value=0.25 Score=24.42 Aligned_cols=10 Identities=50% Similarity=0.760 Sum_probs=3.1
Q ss_pred CCEEEccCCc
Q 010041 175 LETLSLDGNK 184 (519)
Q Consensus 175 L~~L~L~~n~ 184 (519)
|+.|++++|+
T Consensus 3 L~~L~l~~n~ 12 (17)
T PF13504_consen 3 LRTLDLSNNR 12 (17)
T ss_dssp -SEEEETSS-
T ss_pred cCEEECCCCC
Confidence 3333333333
No 427
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=88.28 E-value=0.013 Score=52.04 Aligned_cols=86 Identities=20% Similarity=0.246 Sum_probs=41.0
Q ss_pred CCCCCCCcEEECCCCccccccchhhcCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCC
Q 010041 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (519)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (519)
+..+...+.||++.|++. .+-..|..+..|..|+++.|.+. -.|..++....++.+++..|..+ ..|.+++..++++
T Consensus 38 i~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k 114 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPK 114 (326)
T ss_pred hhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcc
Confidence 344455555666555443 11123333444555555555444 34444555555555555444443 3444455555555
Q ss_pred EEEccCCcC
Q 010041 177 TLSLDGNKL 185 (519)
Q Consensus 177 ~L~L~~n~l 185 (519)
++++-+|.+
T Consensus 115 ~~e~k~~~~ 123 (326)
T KOG0473|consen 115 KNEQKKTEF 123 (326)
T ss_pred hhhhccCcc
Confidence 555544443
No 428
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.95 E-value=0.2 Score=48.96 Aligned_cols=78 Identities=23% Similarity=0.448 Sum_probs=45.2
Q ss_pred ccccccchhhhhcccccCCCCcccc----ccccc--CCCCCc-chhhhh-hhccCCCCChh--HHHHHHHHHHHHHHhcC
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELL----SSLSS--SSGPKI-MLINVL-DQRLSPPVNQK--IVQDIILVSTIAFACLS 506 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~----~~~~~--~~~~~~-~~~~~~-d~~~~~~~~~~--~~~~~~~~~~la~~C~~ 506 (519)
...|+||||.++||+.....-.+.. ..+-. ...|.. ...++| .+++++..+.. ..+.+..+.+++..||.
T Consensus 405 k~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~ 484 (513)
T KOG2052|consen 405 KRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWY 484 (513)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 4689999999999986533222110 00000 011111 112233 35555554432 23567778899999999
Q ss_pred CCCCCCCC
Q 010041 507 SQPKSRPT 514 (519)
Q Consensus 507 ~~p~~RP~ 514 (519)
.+|..|-|
T Consensus 485 ~Np~aRlt 492 (513)
T KOG2052|consen 485 ANPAARLT 492 (513)
T ss_pred CCchhhhH
Confidence 99999975
No 429
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.29 E-value=0.17 Score=49.91 Aligned_cols=22 Identities=23% Similarity=0.374 Sum_probs=19.3
Q ss_pred HHHHHHHhcCCCCCCCCCcccC
Q 010041 497 VSTIAFACLSSQPKSRPTMQRI 518 (519)
Q Consensus 497 ~~~la~~C~~~~p~~RP~m~~v 518 (519)
.+++...|++.||++|||..|+
T Consensus 267 ~~~li~~ll~WDP~kRpTA~~a 288 (538)
T KOG0661|consen 267 AASLIERLLAWDPDKRPTASQA 288 (538)
T ss_pred HHHHHHHHhcCCCccCccHHHH
Confidence 3488999999999999998875
No 430
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.17 E-value=0.54 Score=45.60 Aligned_cols=37 Identities=22% Similarity=0.401 Sum_probs=29.4
Q ss_pred CcceeeeecceeccccccccchhhhhcccccCCCCcc
Q 010041 423 NSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 423 n~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
+++.+++..........|.|+||++++|++.|+.|.+
T Consensus 515 dYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 515 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred cccccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 3455566555556677899999999999999999986
No 431
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=87.02 E-value=0.24 Score=49.58 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=27.3
Q ss_pred ceeeeecceeccccccccchhhhhcccccCCCCcc
Q 010041 425 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 425 l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
+.+++...-.....||.||+|+++.|++.|-.|..
T Consensus 355 iAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~ 389 (550)
T KOG0605|consen 355 IAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFC 389 (550)
T ss_pred cchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 44444444445678999999999999999999975
No 432
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=86.76 E-value=0.012 Score=52.24 Aligned_cols=84 Identities=20% Similarity=0.223 Sum_probs=36.8
Q ss_pred cCCCCCCEEEcccCcCCccCCccccCCCCCCEEEccCCCCCccCCccccCCCCCCEEEccCCcCcccCchhccCCCCCCE
Q 010041 122 DSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGTIPIEIESLRNLQW 201 (519)
Q Consensus 122 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 201 (519)
......+.||++.|++. .+-..|+.++.|..|+++.|.+. ..|..++.+..++.+++..|..+ ..|.+++..+.+++
T Consensus 39 ~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~ 115 (326)
T KOG0473|consen 39 ASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKK 115 (326)
T ss_pred hccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcch
Confidence 33444555555555443 22233444444445555444443 33444444444444444444433 33444444444444
Q ss_pred EeccCCc
Q 010041 202 LDLSSNK 208 (519)
Q Consensus 202 L~l~~n~ 208 (519)
+++..|.
T Consensus 116 ~e~k~~~ 122 (326)
T KOG0473|consen 116 NEQKKTE 122 (326)
T ss_pred hhhccCc
Confidence 4444443
No 433
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=86.27 E-value=0.54 Score=48.22 Aligned_cols=72 Identities=19% Similarity=0.394 Sum_probs=45.9
Q ss_pred ccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhh---hccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..-+.||||||+.+.|+..+..|-.-+... ..+..+-. +.+.. +..+..+.. .+--.|+..+|..
T Consensus 212 YDykaDiWSlGITLIEMAqiEPPHhelnpM-------RVllKiaKSePPTLlq--PS~Ws~~F~---DfLk~cL~Knp~~ 279 (1187)
T KOG0579|consen 212 YDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSEPPTLLQ--PSHWSRSFS---DFLKRCLVKNPRN 279 (1187)
T ss_pred chhhhhHHhhhhHHHHHhccCCCccccchH-------HHHHHHhhcCCCcccC--cchhhhHHH---HHHHHHHhcCCcc
Confidence 445899999999999999999996532211 11111111 11111 223334444 6677899999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
||+..++
T Consensus 280 Rp~aaql 286 (1187)
T KOG0579|consen 280 RPPAAQL 286 (1187)
T ss_pred CCCHHHH
Confidence 9998764
No 434
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=85.84 E-value=0.29 Score=43.98 Aligned_cols=78 Identities=19% Similarity=0.205 Sum_probs=49.3
Q ss_pred ecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCC
Q 010041 430 AHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 430 ~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p 509 (519)
.....-+...|+|+.|++..|.+.|..|.+... .......+..-++. .+.....++. .+...|...+|
T Consensus 194 v~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-------~~etYkrI~k~~~~--~p~~is~~a~---dlI~~ll~~~p 261 (281)
T KOG0580|consen 194 VEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-------HSETYKRIRKVDLK--FPSTISGGAA---DLISRLLVKNP 261 (281)
T ss_pred cCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-------hHHHHHHHHHcccc--CCcccChhHH---HHHHHHhccCc
Confidence 334445678999999999999999999987321 00011111111111 1112223444 77899999999
Q ss_pred CCCCCcccCC
Q 010041 510 KSRPTMQRIS 519 (519)
Q Consensus 510 ~~RP~m~~v~ 519 (519)
.+|.+-.||+
T Consensus 262 ~~r~~l~~v~ 271 (281)
T KOG0580|consen 262 IERLALTEVM 271 (281)
T ss_pred cccccHHHHh
Confidence 9999988764
No 435
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=85.44 E-value=0.62 Score=46.58 Aligned_cols=71 Identities=20% Similarity=0.355 Sum_probs=46.3
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 516 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 516 (519)
...|+||+|++++-+++|+.|++-... ...+.-+.|= .-.++.....++. .+.-+.+..+|.+|-+.+
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFqeAND-------SETLTmImDC--KYtvPshvS~eCr---dLI~sMLvRdPkkRAslE 265 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQEAND-------SETLTMIMDC--KYTVPSHVSKECR---DLIQSMLVRDPKKRASLE 265 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccccccc-------hhhhhhhhcc--cccCchhhhHHHH---HHHHHHHhcCchhhccHH
Confidence 367999999999999999999863210 0011111121 1123444455665 667778889999999988
Q ss_pred cCC
Q 010041 517 RIS 519 (519)
Q Consensus 517 ~v~ 519 (519)
||+
T Consensus 266 eI~ 268 (864)
T KOG4717|consen 266 EIV 268 (864)
T ss_pred HHh
Confidence 875
No 436
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=84.93 E-value=0.61 Score=47.48 Aligned_cols=76 Identities=20% Similarity=0.288 Sum_probs=48.4
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
.+..+.|.||||+|+...|+.-.+.|.-.....+ ...+ +...-.+.+. .+++.+... .+.-.|++.-|.+
T Consensus 199 EGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS--ALYH--IAQNesPtLq---s~eWS~~F~---~Fvd~CLqKipqe 268 (948)
T KOG0577|consen 199 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYH--IAQNESPTLQ---SNEWSDYFR---NFVDSCLQKIPQE 268 (948)
T ss_pred ccccCCccceeeccchhhhhhhcCCCccCchHHH--HHHH--HHhcCCCCCC---CchhHHHHH---HHHHHHHhhCccc
Confidence 4567789999999999999999888864322111 1000 0010011111 234455555 7889999999999
Q ss_pred CCCccc
Q 010041 512 RPTMQR 517 (519)
Q Consensus 512 RP~m~~ 517 (519)
|||-.+
T Consensus 269 Rptse~ 274 (948)
T KOG0577|consen 269 RPTSEE 274 (948)
T ss_pred CCcHHH
Confidence 999765
No 437
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=84.55 E-value=0.48 Score=48.59 Aligned_cols=28 Identities=18% Similarity=0.408 Sum_probs=23.5
Q ss_pred eeecceeccccccccchhhhhcccccCC
Q 010041 428 KLAHTMVVTEKCDVYSFGVVALEILMGR 455 (519)
Q Consensus 428 ~~~~~~~~~~~~dv~sfg~~~le~l~g~ 455 (519)
++.-.....++.|+||||+++-|+.+|.
T Consensus 358 EVILGlpY~~~IDmWSLGCIlAEL~tG~ 385 (586)
T KOG0667|consen 358 EVILGLPYDTAIDMWSLGCILAELFTGE 385 (586)
T ss_pred hhhccCCCCCccceeehhhhHHhHhcCc
Confidence 3444567789999999999999999995
No 438
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=84.53 E-value=0.8 Score=25.37 Aligned_cols=13 Identities=38% Similarity=0.460 Sum_probs=5.5
Q ss_pred CCCEEEcccCcCC
Q 010041 126 NLTYIYLYENNLT 138 (519)
Q Consensus 126 ~L~~L~L~~n~~~ 138 (519)
+|++|+|++|.+.
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00369 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 439
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=84.53 E-value=0.8 Score=25.37 Aligned_cols=13 Identities=38% Similarity=0.460 Sum_probs=5.5
Q ss_pred CCCEEEcccCcCC
Q 010041 126 NLTYIYLYENNLT 138 (519)
Q Consensus 126 ~L~~L~L~~n~~~ 138 (519)
+|++|+|++|.+.
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00370 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 440
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=84.27 E-value=0.53 Score=43.89 Aligned_cols=22 Identities=18% Similarity=0.460 Sum_probs=19.1
Q ss_pred HHHHHHHhcCCCCCCCCCcccC
Q 010041 497 VSTIAFACLSSQPKSRPTMQRI 518 (519)
Q Consensus 497 ~~~la~~C~~~~p~~RP~m~~v 518 (519)
++.++-.|++.||++|++-+|.
T Consensus 260 ~ld~~k~cL~~dP~~R~sc~ql 281 (396)
T KOG0593|consen 260 LLDLLKKCLKMDPDDRLSCEQL 281 (396)
T ss_pred HHHHHHHHhcCCccccccHHHH
Confidence 5689999999999999987653
No 441
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=84.02 E-value=0.41 Score=45.64 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=23.8
Q ss_pred eeccccccccchhhhhcccccCCCCcc
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
...+..+|.||+|+++.|+++|..|..
T Consensus 200 ~gy~~~vDWWsLGillYeML~G~pPF~ 226 (357)
T KOG0598|consen 200 KGYDKAVDWWSLGILLYEMLTGKPPFY 226 (357)
T ss_pred CCCCcccchHhHHHHHHHHhhCCCCCc
Confidence 345678999999999999999999986
No 442
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=83.86 E-value=0.32 Score=26.45 Aligned_cols=18 Identities=39% Similarity=0.632 Sum_probs=9.4
Q ss_pred CCCcEEECCCCccccccc
Q 010041 101 PNLQYLDLGSNNLSGSIP 118 (519)
Q Consensus 101 ~~L~~L~l~~n~~~~~~~ 118 (519)
++|++|+|++|.+++...
T Consensus 2 ~~L~~L~l~~n~i~~~g~ 19 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGA 19 (24)
T ss_dssp TT-SEEE-TSSBEHHHHH
T ss_pred CCCCEEEccCCcCCHHHH
Confidence 456666666666654433
No 443
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=83.12 E-value=0.26 Score=45.55 Aligned_cols=75 Identities=21% Similarity=0.400 Sum_probs=47.6
Q ss_pred ceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC--CChhHHHHHHHHHHHHHHhcCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP--VNQKIVQDIILVSTIAFACLSSQP 509 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~la~~C~~~~p 509 (519)
......+.|+||+|+.+.|+..|+.|+..+....... .+...-++. .+..+..+.. .....|+-..|
T Consensus 203 EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF--------MIPT~PPPTF~KPE~WS~~F~---DFi~~CLiK~P 271 (502)
T KOG0574|consen 203 EIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF--------MIPTKPPPTFKKPEEWSSEFN---DFIRSCLIKKP 271 (502)
T ss_pred HhccchhhhHhhhcchhhhhhcCCCCcccccccceeE--------eccCCCCCCCCChHhhhhHHH---HHHHHHhcCCH
Confidence 3345568999999999999999999998665432111 010011111 1222333444 77889999999
Q ss_pred CCCCCccc
Q 010041 510 KSRPTMQR 517 (519)
Q Consensus 510 ~~RP~m~~ 517 (519)
++|-|.-+
T Consensus 272 E~R~TA~~ 279 (502)
T KOG0574|consen 272 EERKTALR 279 (502)
T ss_pred HHHHHHHH
Confidence 99976543
No 444
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.02 E-value=0.26 Score=43.09 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=35.2
Q ss_pred CCCEEEccCCcCcccCchhccCCCCCCEEeccCCcCCCCC-CcccC-CcCccCeeeCCCCc-CCCcCChhhccCCCCcee
Q 010041 174 NLETLSLDGNKLSGTIPIEIESLRNLQWLDLSSNKLSGTI-PKEIG-SLRNLKELDLSSNK-LGGVLPQEIENLKSLTAL 250 (519)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~-p~~l~-~l~~L~~L~l~~n~-l~~~~p~~l~~~~~L~~L 250 (519)
.++.++-++..+..+--..+.+++.++.|.+.+|.--+.. -+.++ -.++|+.|++++|. ++..--..+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 3455555555554443444555555555555554322110 01111 12456666666553 333222334444455544
Q ss_pred ec
Q 010041 251 SM 252 (519)
Q Consensus 251 ~l 252 (519)
.+
T Consensus 182 ~l 183 (221)
T KOG3864|consen 182 HL 183 (221)
T ss_pred Hh
Confidence 44
No 445
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.84 E-value=0.14 Score=44.60 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=19.9
Q ss_pred cCCCEEEccCC-ccccccccccccCCCCCEEEccC
Q 010041 389 FNLASLDLSKN-KLSGSIPTEIGNCSELRNLTLNH 422 (519)
Q Consensus 389 ~~L~~L~l~~n-~l~~~~~~~l~~l~~L~~L~l~~ 422 (519)
++|+.|++++| +|++..-..+..+++|+.|.+.+
T Consensus 151 ~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 151 PSLQDLDLSGCPRITDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred cchheeeccCCCeechhHHHHHHHhhhhHHHHhcC
Confidence 46666666655 35555555566666666665554
No 446
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=82.68 E-value=1.3 Score=24.45 Aligned_cols=23 Identities=43% Similarity=0.671 Sum_probs=17.5
Q ss_pred CCCCcEEECCCCccccccchhhc
Q 010041 100 FPNLQYLDLGSNNLSGSIPSQID 122 (519)
Q Consensus 100 l~~L~~L~l~~n~~~~~~~~~l~ 122 (519)
+++|++|+|++|.+....+..|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 46899999999999865444443
No 447
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=82.68 E-value=1.3 Score=24.45 Aligned_cols=23 Identities=43% Similarity=0.671 Sum_probs=17.5
Q ss_pred CCCCcEEECCCCccccccchhhc
Q 010041 100 FPNLQYLDLGSNNLSGSIPSQID 122 (519)
Q Consensus 100 l~~L~~L~l~~n~~~~~~~~~l~ 122 (519)
+++|++|+|++|.+....+..|.
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHcc
Confidence 46899999999999865444443
No 448
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=80.67 E-value=1.6 Score=46.62 Aligned_cols=73 Identities=22% Similarity=0.381 Sum_probs=49.0
Q ss_pred eccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCC---ChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV---NQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
..+.++|+||+|+.++|+.-|..|......... =..-++-+++. +..+.++.. .....|+..+-+
T Consensus 204 tyd~R~D~WsLGITaIEladG~PPl~DmHPmra---------LF~IpRNPPPkLkrp~kWs~~Fn---dFIs~cL~Kd~e 271 (953)
T KOG0587|consen 204 TYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA---------LFLIPRNPPPKLKRPKKWSKKFN---DFISTCLVKDYE 271 (953)
T ss_pred CcccccchhhccceeehhcCCCCCccCcchhhh---------hccCCCCCCccccchhhHHHHHH---HHHHHHHhhccc
Confidence 455789999999999999999999754332110 00011222221 234445555 788999999999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
.||+|.+.
T Consensus 272 ~RP~~~~l 279 (953)
T KOG0587|consen 272 QRPSTEEL 279 (953)
T ss_pred cCcchhhh
Confidence 99999875
No 449
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=78.83 E-value=1.2 Score=47.28 Aligned_cols=74 Identities=22% Similarity=0.321 Sum_probs=44.0
Q ss_pred eccccccccchhhhhcccccC-CCCcccccccccC-CCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMG-RHPGELLSSLSSS-SGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g-~~p~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
..+...|++|+|++.+-.++| .+|.+.--..... ...+..+.. +.+. .++ ++. .+.-.....+|..
T Consensus 690 ~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~-----L~~~--~d~--eA~---dLI~~ml~~dP~~ 757 (903)
T KOG1027|consen 690 RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVH-----LEPL--PDC--EAK---DLISRMLNPDPQL 757 (903)
T ss_pred ccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceee-----eccC--chH--HHH---HHHHHhcCCCccc
Confidence 345578999999999998886 9998631110000 000000000 1111 111 333 7788899999999
Q ss_pred CCCcccCC
Q 010041 512 RPTMQRIS 519 (519)
Q Consensus 512 RP~m~~v~ 519 (519)
||+..+|.
T Consensus 758 RPsa~~VL 765 (903)
T KOG1027|consen 758 RPSATDVL 765 (903)
T ss_pred CCCHHHHh
Confidence 99998873
No 450
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=77.08 E-value=3.2 Score=39.74 Aligned_cols=25 Identities=28% Similarity=0.464 Sum_probs=21.4
Q ss_pred eeccccccccchhhhhcccccCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHP 457 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p 457 (519)
...+...|+||.|+++-|+++|+.-
T Consensus 203 ~~Yt~aiDiWSvGCI~AEmL~gkpl 227 (359)
T KOG0660|consen 203 SEYTKAIDIWSVGCILAEMLTGKPL 227 (359)
T ss_pred ccccchhhhhhhhHHHHHHHcCCCC
Confidence 3567789999999999999999844
No 451
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=76.95 E-value=0.99 Score=39.77 Aligned_cols=27 Identities=33% Similarity=0.487 Sum_probs=24.1
Q ss_pred eccccccccchhhhhcccccCCCCccc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGEL 460 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~~ 460 (519)
..+-|+||||+|+...|+.+++.|++.
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred cceeehhhhhhhhhhhhhhhccccccc
Confidence 356789999999999999999999974
No 452
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=76.35 E-value=1.8 Score=42.96 Aligned_cols=82 Identities=17% Similarity=0.209 Sum_probs=49.8
Q ss_pred eeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhc--cCCCCChhHHHHHHHHHHHHHHh
Q 010041 427 GKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQR--LSPPVNQKIVQDIILVSTIAFAC 504 (519)
Q Consensus 427 ~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~la~~C 504 (519)
+++..........|+||.|++..-+++|..|........ ....+.... ...+.-+...+.+. .+...+
T Consensus 207 PEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~-------~~~~i~~~~~~f~~~~w~~is~~ak---d~i~~l 276 (382)
T KOG0032|consen 207 PEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE-------IFLAILRGDFDFTSEPWDDISESAK---DFIRKL 276 (382)
T ss_pred chhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH-------HHHHHHcCCCCCCCCCccccCHHHH---HHHHHh
Confidence 333344556778999999999999999999986322110 001111111 11111111223444 678889
Q ss_pred cCCCCCCCCCcccC
Q 010041 505 LSSQPKSRPTMQRI 518 (519)
Q Consensus 505 ~~~~p~~RP~m~~v 518 (519)
+..+|..|++..++
T Consensus 277 l~~dp~~R~ta~~~ 290 (382)
T KOG0032|consen 277 LEFDPRKRLTAAQA 290 (382)
T ss_pred cccCcccCCCHHHH
Confidence 99999999998875
No 453
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=74.47 E-value=1.7 Score=44.85 Aligned_cols=23 Identities=22% Similarity=0.427 Sum_probs=19.2
Q ss_pred ccccccchhhhhcccccCCC-Ccc
Q 010041 437 EKCDVYSFGVVALEILMGRH-PGE 459 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~-p~~ 459 (519)
.+.|+||+|++++|+++|.. |..
T Consensus 411 ~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 411 DLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred CccchhhHHHHHHHHHhCCCCCcc
Confidence 45799999999999999876 443
No 454
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=73.78 E-value=1.7 Score=43.12 Aligned_cols=73 Identities=23% Similarity=0.312 Sum_probs=45.6
Q ss_pred cccccccchhhhhcccccCCCCcccccccccCCCCCcch-hhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010041 436 TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIML-INVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 514 (519)
Q Consensus 436 ~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 514 (519)
..+.|+|+.||.++=++.|+.|.-.-. ...+ ..++...+.-+..++.-++.. .+...-++.||+.|-+
T Consensus 297 g~a~DiWalGVTLYCllfG~~PF~~~~--------~~~l~~KIvn~pL~fP~~pe~~e~~k---Dli~~lL~KdP~~Ri~ 365 (576)
T KOG0585|consen 297 GFALDIWALGVTLYCLLFGQLPFFDDF--------ELELFDKIVNDPLEFPENPEINEDLK---DLIKRLLEKDPEQRIT 365 (576)
T ss_pred chhhhhhhhhhhHHHhhhccCCcccch--------HHHHHHHHhcCcccCCCcccccHHHH---HHHHHHhhcChhheee
Confidence 458899999999999999999974210 0111 122222222221222223333 6677888999999999
Q ss_pred cccCC
Q 010041 515 MQRIS 519 (519)
Q Consensus 515 m~~v~ 519 (519)
..||+
T Consensus 366 l~~ik 370 (576)
T KOG0585|consen 366 LPDIK 370 (576)
T ss_pred hhhhe
Confidence 88874
No 455
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=73.77 E-value=1.7 Score=40.96 Aligned_cols=86 Identities=19% Similarity=0.332 Sum_probs=49.2
Q ss_pred CcceeeeecceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhh-hhccCCCCChhHHHHHHHHHHHH
Q 010041 423 NSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIA 501 (519)
Q Consensus 423 n~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~la 501 (519)
|++.+++......--..|.|++|+++.|+..|+-|.+....-......+.-+.+++ ...++-+. ... ++...+-
T Consensus 416 nyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr--sls---vkas~vl 490 (593)
T KOG0695|consen 416 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLS---VKASHVL 490 (593)
T ss_pred cccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc--eee---hhhHHHH
Confidence 56666666555555567999999999999999999986553221111111122222 22222221 111 2233566
Q ss_pred HHhcCCCCCCCC
Q 010041 502 FACLSSQPKSRP 513 (519)
Q Consensus 502 ~~C~~~~p~~RP 513 (519)
..-+..+|.+|-
T Consensus 491 kgflnkdp~erl 502 (593)
T KOG0695|consen 491 KGFLNKDPKERL 502 (593)
T ss_pred HHhhcCCcHHhc
Confidence 667788888874
No 456
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=72.50 E-value=2.4 Score=39.68 Aligned_cols=84 Identities=20% Similarity=0.260 Sum_probs=46.7
Q ss_pred cceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 431 HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 431 ~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
...+....||.||+|++++=+++|-.|.........+.+.+..+....- ... .....++.+.. -.+...-+..+|.
T Consensus 236 g~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy-~FP-~pEWs~VSe~a--KdlIR~LLkt~Pt 311 (400)
T KOG0604|consen 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY-EFP-EPEWSCVSEAA--KDLIRKLLKTEPT 311 (400)
T ss_pred CchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc-cCC-ChhHhHHHHHH--HHHHHHHhcCCch
Confidence 3345666799999999999999999997643332222222111110000 000 00111222222 1455556788999
Q ss_pred CCCCcccC
Q 010041 511 SRPTMQRI 518 (519)
Q Consensus 511 ~RP~m~~v 518 (519)
+|-|+.||
T Consensus 312 eRlTI~~~ 319 (400)
T KOG0604|consen 312 ERLTIEEV 319 (400)
T ss_pred hheeHHHh
Confidence 99998876
No 457
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=69.41 E-value=1.9 Score=42.85 Aligned_cols=81 Identities=20% Similarity=0.297 Sum_probs=46.4
Q ss_pred ccccccccchhhhhcccccCCC-------CcccccccccCCCCCc----chhhhhhhccCCCCChhHH--HHHHHHHHHH
Q 010041 435 VTEKCDVYSFGVVALEILMGRH-------PGELLSSLSSSSGPKI----MLINVLDQRLSPPVNQKIV--QDIILVSTIA 501 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~-------p~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~--~~~~~~~~la 501 (519)
...+.|||+.|.++||+++... |.... .+....+.+. ...-+|..+.++..+.... +.+..+-+..
T Consensus 401 Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yql-pfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~ 479 (534)
T KOG3653|consen 401 AFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQL-PFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETI 479 (534)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCcccC-chhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHH
Confidence 4457999999999999986432 21111 1111111111 1223444555554433222 2344456889
Q ss_pred HHhcCCCCCCCCCcc
Q 010041 502 FACLSSQPKSRPTMQ 516 (519)
Q Consensus 502 ~~C~~~~p~~RP~m~ 516 (519)
..||..||+.|-|.+
T Consensus 480 EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 480 EECWDHDAEARLTAG 494 (534)
T ss_pred HHHcCCchhhhhhhH
Confidence 999999999998753
No 458
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=68.89 E-value=1.2 Score=43.34 Aligned_cols=36 Identities=19% Similarity=0.382 Sum_probs=30.8
Q ss_pred cceeeeecceeccccccccchhhhhcccccCCCCcc
Q 010041 424 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 424 ~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
++.+++....+.+.|.|.||.|++++|.++|+.|.+
T Consensus 180 YMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 180 YMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred ccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 345556667788999999999999999999999986
No 459
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=65.03 E-value=2.7 Score=42.28 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=21.4
Q ss_pred cccccccchhhhhcccccCCCCcc
Q 010041 436 TEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 436 ~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
....|.|++|+++.|+++|+.|..
T Consensus 597 D~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 597 DRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred chhhHHHHHHHHHHHHHcCCCCCC
Confidence 346799999999999999999975
No 460
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=64.92 E-value=3.2 Score=37.70 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=46.2
Q ss_pred cceeccccccccchhhhhcccccCCCCcccccc--c-ccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCC
Q 010041 431 HTMVVTEKCDVYSFGVVALEILMGRHPGELLSS--L-SSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSS 507 (519)
Q Consensus 431 ~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~--~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~ 507 (519)
.--.+....|+|+-|++++=++.|..|.+.-.. + ....... --+++.-++. ..++.. .+..+.+..
T Consensus 185 rkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~----yd~~~~~w~~----is~~Ak---~LvrrML~~ 253 (355)
T KOG0033|consen 185 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA----YDYPSPEWDT----VTPEAK---SLIRRMLTV 253 (355)
T ss_pred hcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc----cCCCCcccCc----CCHHHH---HHHHHHhcc
Confidence 333455678999999999999999999753110 0 0000000 0011111222 224454 667788899
Q ss_pred CCCCCCCcccC
Q 010041 508 QPKSRPTMQRI 518 (519)
Q Consensus 508 ~p~~RP~m~~v 518 (519)
+|.+|-|..|+
T Consensus 254 dP~kRIta~EA 264 (355)
T KOG0033|consen 254 NPKKRITADEA 264 (355)
T ss_pred ChhhhccHHHH
Confidence 99999998875
No 461
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=64.08 E-value=6.4 Score=39.47 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=20.7
Q ss_pred eeccccccccchhhhhcccccCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHP 457 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p 457 (519)
.......|+|||.++++|++||-.-
T Consensus 426 sgY~~~ADiWS~AC~~FELaTGDyL 450 (590)
T KOG1290|consen 426 SGYSTSADIWSTACMAFELATGDYL 450 (590)
T ss_pred CCCCCchhHHHHHHHHHHhhcCcee
Confidence 3455678999999999999999844
No 462
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=63.62 E-value=6.4 Score=37.81 Aligned_cols=26 Identities=31% Similarity=0.411 Sum_probs=21.9
Q ss_pred ceeccccccccchhhhhcccccCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHP 457 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p 457 (519)
....+.+.|+||-|+++-|++-|+.-
T Consensus 200 a~~Yt~~IDiWSaGCV~aELl~g~pl 225 (364)
T KOG0658|consen 200 ATEYTTSIDIWSAGCVMAELLKGQPL 225 (364)
T ss_pred ccccCceeEEhhhhHHHHHHhcCCcc
Confidence 34567899999999999999998854
No 463
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=62.87 E-value=3.4 Score=40.24 Aligned_cols=70 Identities=20% Similarity=0.291 Sum_probs=43.6
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCcc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQ 516 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 516 (519)
...|.||+|++++.++.|..|++.... +..+.++-...-..+.. +.+.. .+..|.+..+|++|-|+.
T Consensus 232 PEVDsWsLGvLLYtLVyGtMPFDG~Dh-------k~lvrQIs~GaYrEP~~---PSdA~---gLIRwmLmVNP~RRATie 298 (668)
T KOG0611|consen 232 PEVDSWSLGVLLYTLVYGTMPFDGRDH-------KRLVRQISRGAYREPET---PSDAS---GLIRWMLMVNPERRATIE 298 (668)
T ss_pred CccchhhHHHHHHHHhhcccccCCchH-------HHHHHHhhcccccCCCC---CchHH---HHHHHHHhcCcccchhHH
Confidence 367999999999999999999874221 11111111111111111 11222 667888899999999998
Q ss_pred cCC
Q 010041 517 RIS 519 (519)
Q Consensus 517 ~v~ 519 (519)
||+
T Consensus 299 DiA 301 (668)
T KOG0611|consen 299 DIA 301 (668)
T ss_pred HHh
Confidence 874
No 464
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=61.09 E-value=7.8 Score=21.62 Aligned_cols=12 Identities=58% Similarity=0.808 Sum_probs=5.9
Q ss_pred CCCEEEccCCcC
Q 010041 174 NLETLSLDGNKL 185 (519)
Q Consensus 174 ~L~~L~L~~n~l 185 (519)
+|+.|++++|+|
T Consensus 3 ~L~~L~L~~NkI 14 (26)
T smart00365 3 NLEELDLSQNKI 14 (26)
T ss_pred ccCEEECCCCcc
Confidence 444555555544
No 465
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=61.01 E-value=7.8 Score=35.88 Aligned_cols=27 Identities=30% Similarity=0.678 Sum_probs=23.3
Q ss_pred eeccccccccchhhhhcccccCCCCcc
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.++..-.|+|.||++....+||+.|.+
T Consensus 200 ~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 200 LVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred eEecccccchheeeeeeeeecCCCcch
Confidence 445567899999999999999999976
No 466
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=60.99 E-value=5.5 Score=37.94 Aligned_cols=24 Identities=33% Similarity=0.522 Sum_probs=19.0
Q ss_pred eccccccccchhhhhcccccCCCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHP 457 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p 457 (519)
+.+...|+|+||..++|+.-+.+-
T Consensus 258 n~~~a~dIy~fgmcAlemailEiq 281 (458)
T KOG1266|consen 258 NTTGASDIYKFGMCALEMAILEIQ 281 (458)
T ss_pred ccccchhhhhhhHHHHHHHHheec
Confidence 455689999999999998766654
No 467
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=60.98 E-value=7.6 Score=39.10 Aligned_cols=25 Identities=20% Similarity=0.387 Sum_probs=21.8
Q ss_pred eccccccccchhhhhcccccCCCCc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
..+...|+||.|+++.|+++|+...
T Consensus 296 ~Yg~aVDlWS~GCIl~El~~gkPI~ 320 (560)
T KOG0600|consen 296 SYGTAVDLWSVGCILAELFLGKPIL 320 (560)
T ss_pred ccccceeehhhhHHHHHHHcCCCCc
Confidence 4556899999999999999999775
No 468
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=60.72 E-value=1.6 Score=43.84 Aligned_cols=72 Identities=25% Similarity=0.403 Sum_probs=41.8
Q ss_pred ceeccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 510 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~ 510 (519)
.....+|.|+|++|.++.|++. =..+.+.... ..++-|..+++..-.+.+++. .+-.+-+.+.|.
T Consensus 436 g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t----------~~d~r~g~ip~~~~~d~p~e~----~ll~~lls~~p~ 501 (516)
T KOG1033|consen 436 GQQYSEKVDIYALGLILAELLIQFSTQFERIAT----------LTDIRDGIIPPEFLQDYPEEY----TLLQQLLSPSPE 501 (516)
T ss_pred hhhhhhhcchhhHHHHHHHHHHHhccHHHHHHh----------hhhhhcCCCChHHhhcCcHHH----HHHHHhcCCCcc
Confidence 3456789999999999999886 2233332211 112223233222212222332 456788999999
Q ss_pred CCCCccc
Q 010041 511 SRPTMQR 517 (519)
Q Consensus 511 ~RP~m~~ 517 (519)
+||+.-+
T Consensus 502 ~RP~~~~ 508 (516)
T KOG1033|consen 502 ERPSAIE 508 (516)
T ss_pred cCchHHH
Confidence 9996544
No 469
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=57.70 E-value=4.1 Score=41.60 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=25.5
Q ss_pred eeecceeccccccccchhhhhcccccCCCCcc
Q 010041 428 KLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 428 ~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
++......+...|.||+|++++|...|+.|..
T Consensus 170 Elv~e~pyd~~sDlWslGcilYE~~~G~PPF~ 201 (808)
T KOG0597|consen 170 ELVEEQPYDHTSDLWSLGCILYELYVGQPPFY 201 (808)
T ss_pred HHHcCCCccchhhHHHHHHHHHHHhcCCCCch
Confidence 33344455667899999999999999999974
No 470
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=56.05 E-value=9.9 Score=21.49 Aligned_cols=12 Identities=50% Similarity=0.722 Sum_probs=5.6
Q ss_pred CCCEEEccCCCC
Q 010041 150 NLEVLDLGSNNL 161 (519)
Q Consensus 150 ~L~~L~L~~n~l 161 (519)
+|++|+|++|.+
T Consensus 3 ~L~~LdL~~N~i 14 (28)
T smart00368 3 SLRELDLSNNKL 14 (28)
T ss_pred ccCEEECCCCCC
Confidence 344444444444
No 471
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=55.77 E-value=3.7 Score=40.46 Aligned_cols=28 Identities=36% Similarity=0.547 Sum_probs=24.7
Q ss_pred eeccccccccchhhhhcccccCCCCccc
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGEL 460 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~ 460 (519)
.+.+.|.||||.||+.+.-+.|+.|...
T Consensus 659 PKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 659 PKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred CccccceeeEeeehhhhhhhccCCCCCC
Confidence 3567899999999999999999999863
No 472
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=53.96 E-value=9.3 Score=21.32 Aligned_cols=13 Identities=31% Similarity=0.626 Sum_probs=7.0
Q ss_pred CCCEEEccCCcCc
Q 010041 174 NLETLSLDGNKLS 186 (519)
Q Consensus 174 ~L~~L~L~~n~l~ 186 (519)
+|+.|++++|+++
T Consensus 3 ~L~~L~vs~N~Lt 15 (26)
T smart00364 3 SLKELNVSNNQLT 15 (26)
T ss_pred ccceeecCCCccc
Confidence 4555555555554
No 473
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=53.54 E-value=84 Score=31.78 Aligned_cols=271 Identities=18% Similarity=0.094 Sum_probs=119.3
Q ss_pred CCCCEEEcccCcCCccCCccccC--CCCCCEEEccCCCCCccCCccc---cCCCCCCEEEccCCcCcccCchhccCC---
Q 010041 125 SNLTYIYLYENNLTGTIPKEIGS--LRNLEVLDLGSNNLNGTIPIEI---GSVRNLETLSLDGNKLSGTIPIEIESL--- 196 (519)
Q Consensus 125 ~~L~~L~L~~n~~~~~~p~~~~~--l~~L~~L~L~~n~l~~~~p~~l---~~l~~L~~L~L~~n~l~~~~p~~l~~l--- 196 (519)
+.+++++++.|.+....|-.+.. ++ ++++.|.++...-..+ ..=..+.+++++.|.....+|..+..+
T Consensus 165 pr~r~~dls~npi~dkvpihl~~p~~p----l~lr~c~lsskfis~l~~qsg~~~lteldls~n~~Kddip~~~n~~a~~ 240 (553)
T KOG4242|consen 165 PRARQHDLSPNPIGDKVPIHLPQPGNP----LSLRVCELSSKFISKLLIQSGRLWLTELDLSTNGGKDDIPRTLNKKAGT 240 (553)
T ss_pred chhhhhccCCCcccccCCccccCCCCc----cchhhhhhhhhHHHHhhhhhccccccccccccCCCCccchhHHHHhhhh
Confidence 45677888888776555544421 12 4555554432111010 011246777777777666666443221
Q ss_pred CCCCEEeccCCcCCCC---CCcccCCcCccCeeeCCCCcCCC----cCC----hhhccCCCCceeecccccccCcCcccc
Q 010041 197 RNLQWLDLSSNKLSGT---IPKEIGSLRNLKELDLSSNKLGG----VLP----QEIENLKSLTALSMDANNLGGPIPSTL 265 (519)
Q Consensus 197 ~~L~~L~l~~n~l~~~---~p~~l~~l~~L~~L~l~~n~l~~----~~p----~~l~~~~~L~~L~l~~n~l~~~~~~~l 265 (519)
..++.++.+...+.-. -+-..+.-+++...+++.|..+. +.+ +.+..-.++ +|++..+..-..-+..+
T Consensus 241 ~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k~~fS~~~sg-hln~~~~~~psE~lks~ 319 (553)
T KOG4242|consen 241 LVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEKDTFSPDPSG-HLNSRPRYTPSEKLKSM 319 (553)
T ss_pred hhhhcccccccccchhhcccccccccccccchhhhccCCCCcccccccccccccccCcCccc-ccccccccCchhhhhhh
Confidence 2355555554433211 11122344567777777665431 111 122223344 55555443322211111
Q ss_pred -c-----CCCCcceeeccCccCccc-CChhccCCCCCCEEeccCCcccccCCCC--CCCCCCCcEEeCcCCccc-----c
Q 010041 266 -F-----RLTNIEYLSLGFNRFNGS-IPREIVNLKNLTSLSLGGNKLTGHIPST--LGRLTSLQILDLSSNQLH-----S 331 (519)
Q Consensus 266 -~-----~~~~L~~L~l~~n~~~~~-~~~~l~~~~~L~~L~l~~n~l~~~~~~~--l~~l~~L~~L~l~~n~l~-----~ 331 (519)
- .-+.=-++++..|...+. ....-.+-.+++++.+..|.+.++.-.. +..-++.+.+++....-. +
T Consensus 320 LLgla~ne~t~g~rldl~~cp~~~a~vleaci~g~R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~ 399 (553)
T KOG4242|consen 320 LLGLAENEATLGARLDLRRCPLERAEVLEACIFGQRVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSS 399 (553)
T ss_pred hcccccccccccccCChhhccccccchhhccccceeeeEeeccccccccccccccceeeccccccccccccCCceecccc
Confidence 0 001112344444433221 1111112235777888777776554322 223345555655433210 0
Q ss_pred CCchhh----cCCCCCCEEECcCCcCcccC---CCCCCCCCCCcEEEccCccCccc----cchhhhcccCCCEEEccCCc
Q 010041 332 SIPLVI----GNFSALSYLDLSDNRICGII---PDELTKLSHLKYLNLSSNLLSGQ----IPFAIGKLFNLASLDLSKNK 400 (519)
Q Consensus 332 ~~~~~~----~~~~~L~~L~l~~n~l~~~~---~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~ 400 (519)
...... ...--++.+.++.|.+.... ......-+.+..|++++|..... +|........+..+..+.|.
T Consensus 400 ~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~ 479 (553)
T KOG4242|consen 400 TEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNL 479 (553)
T ss_pred ccchhhhhhhcccccccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCC
Confidence 000000 11223455666666554321 12233446677888888765421 33333333445444444443
No 474
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=52.63 E-value=4.6 Score=37.26 Aligned_cols=73 Identities=18% Similarity=0.195 Sum_probs=43.8
Q ss_pred ccccccccchhhhhcccccCCCCcccccccc---cCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGELLSSLS---SSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 511 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 511 (519)
.+...|.|+.|+++..++.|..|.+...... ....++.. .-. ++. .+..+++. .+.-.|++.+|..
T Consensus 205 Ys~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyq---F~s----peW-adis~~~K---dLIsrlLqVdp~~ 273 (411)
T KOG0599|consen 205 YSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQ---FRS----PEW-ADISATVK---DLISRLLQVDPTK 273 (411)
T ss_pred ccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccc---cCC----cch-hhccccHH---HHHHHHHeeCchh
Confidence 3457899999999999999999986321110 00000000 000 010 01123333 6788999999999
Q ss_pred CCCcccC
Q 010041 512 RPTMQRI 518 (519)
Q Consensus 512 RP~m~~v 518 (519)
|-|.+|+
T Consensus 274 Ritake~ 280 (411)
T KOG0599|consen 274 RITAKEA 280 (411)
T ss_pred cccHHHH
Confidence 9988775
No 475
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=50.64 E-value=5.3 Score=35.73 Aligned_cols=26 Identities=35% Similarity=0.562 Sum_probs=22.5
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
..+.+.|+|+||++++|+++|+.|..
T Consensus 176 ~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 176 GYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 34458999999999999999999975
No 476
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=49.63 E-value=69 Score=32.34 Aligned_cols=16 Identities=38% Similarity=0.453 Sum_probs=9.0
Q ss_pred cccCCCEEEccCCccc
Q 010041 387 KLFNLASLDLSKNKLS 402 (519)
Q Consensus 387 ~~~~L~~L~l~~n~l~ 402 (519)
.-+.++.|++++|...
T Consensus 438 stqtl~kldisgn~mg 453 (553)
T KOG4242|consen 438 STQTLAKLDISGNGMG 453 (553)
T ss_pred cCcccccccccCCCcc
Confidence 3445666666666543
No 477
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=48.61 E-value=19 Score=34.41 Aligned_cols=22 Identities=23% Similarity=0.499 Sum_probs=19.2
Q ss_pred eccccccccchhhhhcccccCC
Q 010041 434 VVTEKCDVYSFGVVALEILMGR 455 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~ 455 (519)
..+...|+||+|++..|+++++
T Consensus 197 ~Ys~~vDiWs~GcIfaEm~~~~ 218 (323)
T KOG0594|consen 197 SYSTSVDIWSLGCIFAEMFTRR 218 (323)
T ss_pred cCCCCcchHhHHHHHHHHHhCC
Confidence 4567889999999999999966
No 478
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=47.36 E-value=14 Score=38.12 Aligned_cols=25 Identities=28% Similarity=0.497 Sum_probs=22.6
Q ss_pred ccccccccchhhhhcccccCCCCcc
Q 010041 435 VTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
...++|+|+.|++++-++.|..|.+
T Consensus 232 ~gpe~D~Wslgvvly~LV~GsLPFD 256 (596)
T KOG0586|consen 232 DGPEVDIWSLGVVLYALVEGSLPFD 256 (596)
T ss_pred CCcceehhhhhhhheeeeecccccC
Confidence 4468999999999999999999987
No 479
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=47.30 E-value=6.5 Score=39.10 Aligned_cols=72 Identities=19% Similarity=0.280 Sum_probs=42.7
Q ss_pred cceeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCC---CChhHHHHHHHHHHHHHHhcCC
Q 010041 431 HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPP---VNQKIVQDIILVSTIAFACLSS 507 (519)
Q Consensus 431 ~~~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~~~~la~~C~~~ 507 (519)
...+.+...|.|++|++++|++.|+-|..... .++. .+-+|+++... .+....++.. .+-..-++.
T Consensus 359 ~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K-------eKvk-~eEvdrr~~~~~~ey~~kFS~eak---slc~~LL~K 427 (591)
T KOG0986|consen 359 QNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK-------EKVK-REEVDRRTLEDPEEYSDKFSEEAK---SLCEGLLTK 427 (591)
T ss_pred cCCcccCCccHHHHHhHHHHHHcccCchhhhh-------hhhh-HHHHHHHHhcchhhcccccCHHHH---HHHHHHHcc
Confidence 34445667899999999999999999986422 1111 12244443321 1222234444 445555677
Q ss_pred CCCCCC
Q 010041 508 QPKSRP 513 (519)
Q Consensus 508 ~p~~RP 513 (519)
+|++|-
T Consensus 428 dp~~RL 433 (591)
T KOG0986|consen 428 DPEKRL 433 (591)
T ss_pred CHHHhc
Confidence 887775
No 480
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=47.29 E-value=7.9 Score=39.47 Aligned_cols=63 Identities=32% Similarity=0.311 Sum_probs=36.1
Q ss_pred CCCCCcEEeCcCCccccC--CchhhcCCCCCCEEECcCC--cCcccCCCCCCC--CCCCcEEEccCccCcc
Q 010041 315 RLTSLQILDLSSNQLHSS--IPLVIGNFSALSYLDLSDN--RICGIIPDELTK--LSHLKYLNLSSNLLSG 379 (519)
Q Consensus 315 ~l~~L~~L~l~~n~l~~~--~~~~~~~~~~L~~L~l~~n--~l~~~~~~~~~~--l~~L~~L~l~~n~l~~ 379 (519)
+.+.+..++|++|++... +.......|+|..|+|++| .+.. ..++.+ ...|++|-+.+|.+..
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~--~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISS--ESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcc--hhhhhhhcCCCHHHeeecCCcccc
Confidence 456677788888887532 1222345677888888887 3221 122222 2345667777776654
No 481
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=46.98 E-value=6.7 Score=40.76 Aligned_cols=38 Identities=29% Similarity=0.438 Sum_probs=29.9
Q ss_pred CCcceeeeecceeccccccccchhhhhcccccCCCCcc
Q 010041 422 HNSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 422 ~n~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
.|++..++..-...+.-||.|+.|+++.|++.|+.|.-
T Consensus 835 ~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~ 872 (1034)
T KOG0608|consen 835 PNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFL 872 (1034)
T ss_pred CcccChHHhcccCccccchhhHhhHHHHHHhhCCCCcc
Confidence 45565555444456788999999999999999999964
No 482
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=46.82 E-value=5.7 Score=41.63 Aligned_cols=29 Identities=31% Similarity=0.348 Sum_probs=25.2
Q ss_pred ceeccccccccchhhhhcccccCCCCccc
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGEL 460 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~~ 460 (519)
....+..+|.||||+.+++-+||..|...
T Consensus 198 q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 198 QKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 35667889999999999999999999753
No 483
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=46.55 E-value=12 Score=35.63 Aligned_cols=26 Identities=31% Similarity=0.404 Sum_probs=22.4
Q ss_pred eccccccccchhhhhcccccCCCCcc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
......|.|..|++++|+.+||.|..
T Consensus 344 DYgraVDWWG~GVVMYEMmCGRLPFy 369 (516)
T KOG0690|consen 344 DYGRAVDWWGVGVVMYEMMCGRLPFY 369 (516)
T ss_pred cccceeehhhhhHHHHHHHhccCccc
Confidence 34457889999999999999999975
No 484
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=44.04 E-value=14 Score=35.03 Aligned_cols=64 Identities=20% Similarity=0.282 Sum_probs=37.8
Q ss_pred eeccccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCC
Q 010041 433 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 512 (519)
Q Consensus 433 ~~~~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 512 (519)
...+.+.|.|++|++++.+-+|+.|.+...... .... ....+ . +.++.+. .+...-++.+|++|
T Consensus 225 ~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~---~~~~--------~f~~C-~-~~Pe~v~---~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 225 APYTFATDAWQLGITLYSLWCGRLPFGLSSPEA---DPEW--------DFSRC-R-DMPEPVQ---FLIRGLLQRNPEDR 288 (288)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGS---TSGG--------GGTTS-S----HHHH---HHHHHHT-SSGGGS
T ss_pred ceeeeccCHHHHHHHHHHHHHccCCCCCCCccc---cccc--------cchhc-C-CcCHHHH---HHHHHHccCCcccC
Confidence 456788999999999999999999987543211 1110 12222 2 3445555 55666778888777
No 485
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=43.74 E-value=6.9 Score=36.68 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=26.5
Q ss_pred ceeeeecceeccccccccchhhhhcccccCCCCcc
Q 010041 425 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 425 l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
+.+++..+-......|.|+||+++.|++.|..|..
T Consensus 208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~ 242 (355)
T KOG0616|consen 208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY 242 (355)
T ss_pred cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence 34444444444567899999999999999999974
No 486
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=42.84 E-value=20 Score=36.55 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=23.8
Q ss_pred eecceeccccccccchhhhhcccccCCCCc
Q 010041 429 LAHTMVVTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 429 ~~~~~~~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
|.......-..|.||.||.++|+.||++-+
T Consensus 606 IiLG~~yd~~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 606 IILGLPYDYPIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred eeecCcccCCccceeeceeeEEeeccceec
Confidence 344455666899999999999999999654
No 487
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=36.64 E-value=20 Score=36.70 Aligned_cols=64 Identities=25% Similarity=0.331 Sum_probs=37.8
Q ss_pred cCCCCCCEEEcccCcCCcc--CCccccCCCCCCEEEccCC--CCCccCCcccc--CCCCCCEEEccCCcCcc
Q 010041 122 DSLSNLTYIYLYENNLTGT--IPKEIGSLRNLEVLDLGSN--NLNGTIPIEIG--SVRNLETLSLDGNKLSG 187 (519)
Q Consensus 122 ~~l~~L~~L~L~~n~~~~~--~p~~~~~l~~L~~L~L~~n--~l~~~~p~~l~--~l~~L~~L~L~~n~l~~ 187 (519)
.+.+.+..++|++|++-.. +...-...|+|+.|+|++| .+.. -.++. +...|++|-+.||.+..
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~--~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISS--ESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcc--hhhhhhhcCCCHHHeeecCCcccc
Confidence 3456677777777766532 1111234578888888888 3321 11222 23457888888888754
No 488
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=34.14 E-value=28 Score=19.07 Aligned_cols=11 Identities=45% Similarity=0.637 Sum_probs=5.5
Q ss_pred CCCCEEEccCC
Q 010041 173 RNLETLSLDGN 183 (519)
Q Consensus 173 ~~L~~L~L~~n 183 (519)
++|++|++++|
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 34555555554
No 489
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=32.18 E-value=42 Score=33.13 Aligned_cols=71 Identities=20% Similarity=0.161 Sum_probs=42.3
Q ss_pred cccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 010041 436 TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTM 515 (519)
Q Consensus 436 ~~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 515 (519)
.+|.|.|+-|-+++|++....|....... ........+..-+.++..+++ .+. ++...-++.+|++||+-
T Consensus 435 y~kAD~WA~GalaYEIfg~~NPFY~rGem---~L~~r~Yqe~qLPalp~~vpp----~~r---qlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 435 YEKADTWAAGALAYEIFGRSNPFYKRGEM---LLDTRTYQESQLPALPSRVPP----VAR---QLVFDLLKRDPSKRVSP 504 (598)
T ss_pred cchhhhhhhhhhHHHHhccCCcccccchh---eechhhhhhhhCCCCcccCCh----HHH---HHHHHHhcCCccccCCc
Confidence 46899999999999999999997531110 000000111111233333332 333 66777889999999975
Q ss_pred c
Q 010041 516 Q 516 (519)
Q Consensus 516 ~ 516 (519)
.
T Consensus 505 ~ 505 (598)
T KOG4158|consen 505 N 505 (598)
T ss_pred c
Confidence 3
No 490
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=30.11 E-value=21 Score=40.03 Aligned_cols=73 Identities=21% Similarity=0.324 Sum_probs=40.9
Q ss_pred ccccccccchhhhhccccc-CCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHHHHHHHHHHHhcCCCCCCCC
Q 010041 435 VTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 513 (519)
Q Consensus 435 ~~~~~dv~sfg~~~le~l~-g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 513 (519)
.+.+.|++|.|++..|+++ |+.|.+.-+-++-..+........+. .+.+ .. +-++.+...+.+|+.|-
T Consensus 215 L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le-~Ied-------~~---~Rnlil~Mi~rdPs~Rl 283 (1431)
T KOG1240|consen 215 LTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLE-KIED-------VS---LRNLILSMIQRDPSKRL 283 (1431)
T ss_pred cChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHH-hCcC-------cc---HHHHHHHHHccCchhcc
Confidence 6678999999999999986 56666532211111111111111111 1110 01 22667788889999998
Q ss_pred CcccC
Q 010041 514 TMQRI 518 (519)
Q Consensus 514 ~m~~v 518 (519)
+.++.
T Consensus 284 SAedy 288 (1431)
T KOG1240|consen 284 SAEDY 288 (1431)
T ss_pred CHHHH
Confidence 87653
No 491
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=28.59 E-value=54 Score=31.38 Aligned_cols=28 Identities=29% Similarity=0.568 Sum_probs=24.1
Q ss_pred ceeccccccccchhhhhcccccCCCCcc
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGRHPGE 459 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~~p~~ 459 (519)
......+||.||+|++++=++.|-.|..
T Consensus 265 A~~YDKrCDlwSLGvIlYImLsGYpPFv 292 (463)
T KOG0607|consen 265 ATFYDKRCDLWSLGVILYIMLSGYPPFV 292 (463)
T ss_pred cccccccccHHHHHHHHHHHHhCCCCcc
Confidence 3456679999999999999999999974
No 492
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=27.59 E-value=48 Score=30.82 Aligned_cols=24 Identities=17% Similarity=0.320 Sum_probs=19.6
Q ss_pred ceeccccccccchhhhhcccccCC
Q 010041 432 TMVVTEKCDVYSFGVVALEILMGR 455 (519)
Q Consensus 432 ~~~~~~~~dv~sfg~~~le~l~g~ 455 (519)
+.......|+||.||+.-|++.|.
T Consensus 176 sr~Yg~~VDmWavGCI~AELllr~ 199 (318)
T KOG0659|consen 176 SRQYGTGVDMWAVGCIFAELLLRV 199 (318)
T ss_pred chhcCCcchhhhHHHHHHHHHccC
Confidence 345566789999999999998766
No 493
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=26.74 E-value=29 Score=36.92 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=42.2
Q ss_pred ccccccchhhhhcccccCCCCcccccccccCCCCCcchhhhhhhccCCCCChhHHHHH-HHHHHHHHHhcCCCCCCCCCc
Q 010041 437 EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDI-ILVSTIAFACLSSQPKSRPTM 515 (519)
Q Consensus 437 ~~~dv~sfg~~~le~l~g~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~la~~C~~~~p~~RP~m 515 (519)
...|+||-|++...+++|+.|...-.....+.... ...++.-....+.....++ .+.-.+...-++.+|..|-||
T Consensus 504 r~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti 579 (601)
T KOG0590|consen 504 RAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN----NYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITI 579 (601)
T ss_pred chhhhhhccceEEEEecCCCccccccccccchhhh----ccccccccccChHHHHHhchhhHHHHHHHHccCChhheecH
Confidence 35799999999999999999875322110000000 0000000000011111111 112256677789999999999
Q ss_pred ccCC
Q 010041 516 QRIS 519 (519)
Q Consensus 516 ~~v~ 519 (519)
++|.
T Consensus 580 ~~i~ 583 (601)
T KOG0590|consen 580 EQIL 583 (601)
T ss_pred HHHh
Confidence 9873
No 494
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=26.23 E-value=54 Score=34.77 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=25.3
Q ss_pred cceeeeecceeccccccccchhhhhcccccCCCCc
Q 010041 424 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 424 ~l~~~~~~~~~~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
....++......+.+.|++|+|++..-+..|..+.
T Consensus 175 f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i 209 (700)
T KOG2137|consen 175 FLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSI 209 (700)
T ss_pred cccchhhccccccccccceeeeeEEEEEecCCcch
Confidence 34444444456778999999999998888666654
No 495
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=25.34 E-value=83 Score=29.07 Aligned_cols=25 Identities=12% Similarity=0.108 Sum_probs=20.5
Q ss_pred eccccccccchhhhhcccccCCCCc
Q 010041 434 VVTEKCDVYSFGVVALEILMGRHPG 458 (519)
Q Consensus 434 ~~~~~~dv~sfg~~~le~l~g~~p~ 458 (519)
....+.|+|.-|+++-|+.|+.+-.
T Consensus 205 ~yg~~iDiWgAgCimaeMwtrspim 229 (376)
T KOG0669|consen 205 EYGPPIDIWGAGCIMAEMWTRSPIM 229 (376)
T ss_pred ccCCcchhHhHHHHHHHHHccCccc
Confidence 4556899999999999999877654
Done!