Query 010042
Match_columns 519
No_of_seqs 187 out of 1522
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 20:21:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010042.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010042hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1169 Diacylglycerol kinase 100.0 2.9E-74 6.3E-79 618.3 24.4 392 20-470 202-627 (634)
2 KOG0782 Predicted diacylglycer 100.0 2E-64 4.3E-69 525.1 17.8 335 62-464 361-698 (1004)
3 KOG1170 Diacylglycerol kinase 100.0 5E-62 1.1E-66 522.8 8.0 432 22-504 146-838 (1099)
4 PRK13057 putative lipid kinase 100.0 9.8E-42 2.1E-46 346.4 32.4 274 70-463 1-285 (287)
5 PRK13059 putative lipid kinase 100.0 3E-41 6.6E-46 344.4 31.8 278 67-463 2-293 (295)
6 PRK13054 lipid kinase; Reviewe 100.0 1.2E-40 2.6E-45 340.6 33.6 287 64-465 1-296 (300)
7 PRK11914 diacylglycerol kinase 100.0 1.6E-40 3.5E-45 340.3 32.8 288 64-464 6-305 (306)
8 TIGR03702 lip_kinase_YegS lipi 100.0 1.6E-40 3.4E-45 338.7 32.4 282 69-465 2-290 (293)
9 PRK13337 putative lipid kinase 100.0 3.6E-40 7.7E-45 337.7 32.3 282 67-463 2-294 (304)
10 PRK13055 putative lipid kinase 100.0 4E-40 8.7E-45 341.7 32.7 287 66-463 2-301 (334)
11 PRK00861 putative lipid kinase 100.0 2.7E-39 5.8E-44 330.4 33.3 279 66-464 2-298 (300)
12 TIGR00147 lipid kinase, YegS/R 100.0 2.9E-39 6.2E-44 328.7 31.1 280 66-460 1-292 (293)
13 COG1597 LCB5 Sphingosine kinas 100.0 1.8E-38 3.9E-43 324.7 31.2 286 66-466 2-299 (301)
14 PRK12361 hypothetical protein; 100.0 7.5E-37 1.6E-41 336.4 32.2 286 66-464 242-543 (547)
15 PLN02958 diacylglycerol kinase 100.0 3.5E-36 7.7E-41 325.4 29.0 296 64-461 109-464 (481)
16 PF00609 DAGK_acc: Diacylglyce 100.0 7.3E-37 1.6E-41 286.2 13.0 160 261-435 2-161 (161)
17 PLN02204 diacylglycerol kinase 100.0 4.6E-31 9.9E-36 286.4 32.3 318 64-463 157-598 (601)
18 smart00045 DAGKa Diacylglycero 99.9 6.4E-24 1.4E-28 198.4 10.8 159 261-435 2-160 (160)
19 PF00781 DAGK_cat: Diacylglyce 99.9 6.1E-22 1.3E-26 178.4 12.1 122 68-214 1-128 (130)
20 smart00046 DAGKc Diacylglycero 99.8 5.3E-21 1.1E-25 171.5 11.4 100 70-184 1-101 (124)
21 KOG1116 Sphingosine kinase, in 99.8 7.1E-20 1.5E-24 196.2 22.0 299 65-464 178-568 (579)
22 KOG1115 Ceramide kinase [Lipid 99.5 5.3E-13 1.1E-17 137.4 16.4 295 66-453 158-500 (516)
23 KOG4435 Predicted lipid kinase 98.7 1.3E-07 2.9E-12 97.9 10.8 134 63-211 57-196 (535)
24 PRK03708 ppnK inorganic polyph 98.0 3.9E-05 8.6E-10 78.2 10.6 110 68-206 2-115 (277)
25 PRK02645 ppnK inorganic polyph 98.0 5.7E-05 1.2E-09 78.1 11.6 123 65-215 2-127 (305)
26 PRK03378 ppnK inorganic polyph 97.6 0.00057 1.2E-08 70.3 11.3 123 66-214 5-130 (292)
27 PRK14075 pnk inorganic polypho 97.5 0.042 9.1E-07 55.5 23.4 49 404-462 188-236 (256)
28 PRK01231 ppnK inorganic polyph 97.1 0.0057 1.2E-07 63.1 12.3 120 67-214 5-129 (295)
29 COG3199 Predicted inorganic po 97.0 0.0057 1.2E-07 63.5 11.5 55 135-203 102-157 (355)
30 PF01513 NAD_kinase: ATP-NAD k 97.0 0.004 8.7E-08 63.7 9.9 69 133-215 76-144 (285)
31 PRK03372 ppnK inorganic polyph 96.6 0.03 6.5E-07 58.1 13.2 128 65-213 4-138 (306)
32 PRK14077 pnk inorganic polypho 96.6 0.03 6.6E-07 57.5 12.8 123 63-214 7-131 (287)
33 PRK04539 ppnK inorganic polyph 96.3 0.055 1.2E-06 55.9 13.0 127 65-214 4-135 (296)
34 PRK02155 ppnK NAD(+)/NADH kina 96.3 0.051 1.1E-06 56.0 12.4 123 66-214 5-130 (291)
35 PRK02649 ppnK inorganic polyph 96.1 0.073 1.6E-06 55.2 12.6 128 67-212 2-133 (305)
36 PRK01911 ppnK inorganic polyph 95.9 0.13 2.9E-06 52.9 13.4 125 68-214 2-131 (292)
37 PRK03501 ppnK inorganic polyph 95.8 0.12 2.7E-06 52.5 12.5 104 67-213 3-107 (264)
38 PLN02935 Bifunctional NADH kin 95.7 0.18 4E-06 55.3 13.7 124 64-206 192-321 (508)
39 PRK00561 ppnK inorganic polyph 95.2 0.23 5.1E-06 50.3 11.7 74 385-461 164-240 (259)
40 PRK04885 ppnK inorganic polyph 94.8 0.26 5.7E-06 50.1 11.0 98 69-210 3-100 (265)
41 PRK14076 pnk inorganic polypho 94.3 0.41 8.9E-06 53.8 12.3 58 135-206 350-407 (569)
42 PLN02727 NAD kinase 93.1 0.71 1.5E-05 54.0 11.3 122 64-204 676-800 (986)
43 PRK01185 ppnK inorganic polyph 92.6 1.7 3.8E-05 44.3 12.3 114 68-214 2-116 (271)
44 PRK02231 ppnK inorganic polyph 91.4 1.2 2.5E-05 45.6 9.5 66 134-213 43-109 (272)
45 PLN02929 NADH kinase 91.1 1.3 2.7E-05 46.0 9.5 70 133-210 64-144 (301)
46 PF10254 Pacs-1: PACS-1 cytoso 90.5 0.77 1.7E-05 49.4 7.4 48 133-181 75-128 (414)
47 PRK04761 ppnK inorganic polyph 89.6 0.69 1.5E-05 46.6 6.0 35 133-171 25-59 (246)
48 COG0061 nadF NAD kinase [Coenz 83.7 5.9 0.00013 40.6 9.1 70 133-216 55-124 (281)
49 cd08180 PDD 1,3-propanediol de 83.2 5.1 0.00011 41.8 8.6 45 134-179 79-129 (332)
50 cd08197 DOIS 2-deoxy-scyllo-in 80.9 6.4 0.00014 41.7 8.3 38 135-174 86-125 (355)
51 cd08169 DHQ-like Dehydroquinat 75.6 13 0.00027 39.3 8.6 97 67-175 24-125 (344)
52 PF00731 AIRC: AIR carboxylase 74.5 13 0.00029 34.7 7.4 81 78-172 8-89 (150)
53 cd08185 Fe-ADH1 Iron-containin 72.0 21 0.00046 37.9 9.4 123 45-182 1-153 (380)
54 cd08179 NADPH_BDH NADPH-depend 71.8 15 0.00032 39.1 8.1 122 45-181 2-148 (375)
55 cd08195 DHQS Dehydroquinate sy 71.5 14 0.00031 38.8 7.8 92 66-169 24-119 (345)
56 TIGR03405 Phn_Fe-ADH phosphona 71.2 25 0.00053 37.1 9.6 103 67-181 24-148 (355)
57 cd08176 LPO Lactadehyde:propan 71.0 18 0.00038 38.5 8.5 122 45-182 3-150 (377)
58 TIGR01357 aroB 3-dehydroquinat 66.9 22 0.00048 37.2 8.1 91 67-169 21-115 (344)
59 TIGR02482 PFKA_ATP 6-phosphofr 64.2 26 0.00057 36.3 7.9 39 135-177 93-131 (301)
60 TIGR02483 PFK_mixed phosphofru 63.6 22 0.00048 37.3 7.3 43 135-182 96-141 (324)
61 cd08186 Fe-ADH8 Iron-containin 63.4 26 0.00056 37.4 7.9 104 67-182 27-150 (383)
62 PRK09860 putative alcohol dehy 62.8 44 0.00095 35.7 9.5 126 44-182 5-153 (383)
63 PTZ00286 6-phospho-1-fructokin 62.5 22 0.00048 39.1 7.2 56 136-201 179-240 (459)
64 PRK00002 aroB 3-dehydroquinate 62.1 31 0.00066 36.5 8.1 92 66-169 31-126 (358)
65 cd08181 PPD-like 1,3-propanedi 61.3 47 0.001 35.0 9.3 122 45-181 1-146 (357)
66 KOG4180 Predicted kinase [Gene 60.5 4.6 0.0001 42.1 1.5 64 133-207 105-170 (395)
67 cd08550 GlyDH-like Glycerol_de 60.3 29 0.00062 36.5 7.5 41 134-178 78-120 (349)
68 cd00763 Bacterial_PFK Phosphof 60.0 29 0.00062 36.4 7.3 37 135-176 94-130 (317)
69 cd08187 BDH Butanol dehydrogen 59.7 49 0.0011 35.2 9.2 126 44-182 3-151 (382)
70 cd08172 GlyDH-like1 Glycerol d 59.4 55 0.0012 34.3 9.4 92 67-178 24-119 (347)
71 cd08551 Fe-ADH iron-containing 58.3 43 0.00093 35.3 8.5 47 134-181 81-144 (370)
72 PRK10624 L-1,2-propanediol oxi 57.5 48 0.001 35.3 8.7 125 43-182 3-154 (382)
73 PLN02564 6-phosphofructokinase 56.8 27 0.00058 38.7 6.7 57 135-201 178-240 (484)
74 PRK06830 diphosphate--fructose 56.7 28 0.0006 38.2 6.7 56 136-201 175-236 (443)
75 PRK09423 gldA glycerol dehydro 55.8 43 0.00094 35.4 8.0 118 43-181 3-130 (366)
76 TIGR02638 lactal_redase lactal 55.5 50 0.0011 35.2 8.4 125 44-181 3-152 (379)
77 cd08173 Gro1PDH Sn-glycerol-1- 55.1 54 0.0012 34.2 8.5 87 67-173 26-114 (339)
78 PLN00180 NDF6 (NDH-dependent f 54.3 2.7 5.9E-05 39.1 -1.2 13 139-151 130-142 (180)
79 cd08199 EEVS 2-epi-5-epi-valio 54.3 50 0.0011 35.0 8.1 33 135-169 90-122 (354)
80 PRK14072 6-phosphofructokinase 53.4 37 0.0008 36.9 7.0 41 135-176 105-147 (416)
81 PRK15138 aldehyde reductase; P 52.8 66 0.0014 34.4 8.8 124 44-181 5-152 (387)
82 PRK03202 6-phosphofructokinase 52.7 42 0.0009 35.2 7.1 37 135-176 95-131 (320)
83 cd08177 MAR Maleylacetate redu 51.2 75 0.0016 33.2 8.8 88 67-174 24-115 (337)
84 cd08194 Fe-ADH6 Iron-containin 50.2 84 0.0018 33.4 9.1 98 67-179 24-142 (375)
85 cd00363 PFK Phosphofructokinas 49.5 48 0.001 34.9 7.0 42 135-176 94-136 (338)
86 PLN02834 3-dehydroquinate synt 49.2 60 0.0013 35.4 7.9 92 66-169 100-197 (433)
87 cd08170 GlyDH Glycerol dehydro 48.8 50 0.0011 34.6 7.1 96 67-181 23-123 (351)
88 cd08171 GlyDH-like2 Glycerol d 48.6 54 0.0012 34.3 7.3 37 134-174 79-117 (345)
89 PLN02884 6-phosphofructokinase 45.4 54 0.0012 35.7 6.7 57 135-201 145-207 (411)
90 COG1691 NCAIR mutase (PurE)-re 45.2 33 0.00071 34.3 4.5 57 98-172 150-206 (254)
91 cd08175 G1PDH Glycerol-1-phosp 44.4 67 0.0015 33.6 7.2 33 134-170 81-113 (348)
92 PRK15454 ethanol dehydrogenase 44.3 1.1E+02 0.0024 32.8 8.9 125 43-182 22-171 (395)
93 PRK06555 pyrophosphate--fructo 44.2 53 0.0011 35.6 6.4 40 135-176 114-156 (403)
94 PF12219 End_tail_spike: Catal 44.0 11 0.00025 34.4 1.1 15 134-148 85-99 (160)
95 cd08183 Fe-ADH2 Iron-containin 43.8 95 0.0021 32.9 8.3 96 67-181 23-143 (374)
96 PLN03028 pyrophosphate--fructo 43.5 47 0.001 37.9 6.1 46 136-183 176-229 (610)
97 PRK00843 egsA NAD(P)-dependent 43.1 1E+02 0.0022 32.4 8.4 113 43-174 6-124 (350)
98 cd08184 Fe-ADH3 Iron-containin 42.6 1.3E+02 0.0027 31.9 8.9 47 134-181 82-145 (347)
99 cd08192 Fe-ADH7 Iron-containin 42.6 1.1E+02 0.0023 32.4 8.4 19 134-153 82-100 (370)
100 PRK14071 6-phosphofructokinase 42.5 92 0.002 33.2 7.9 44 135-182 109-155 (360)
101 cd08189 Fe-ADH5 Iron-containin 42.4 1.1E+02 0.0024 32.4 8.6 47 134-181 84-148 (374)
102 PRK06203 aroB 3-dehydroquinate 42.3 1.4E+02 0.0029 32.2 9.2 92 66-169 42-145 (389)
103 PRK07085 diphosphate--fructose 42.2 55 0.0012 37.0 6.3 46 136-183 167-220 (555)
104 TIGR02477 PFKA_PPi diphosphate 41.7 48 0.001 37.3 5.8 45 136-182 164-216 (539)
105 cd08196 DHQS-like1 Dehydroquin 39.5 1.7E+02 0.0038 30.8 9.4 91 67-169 20-110 (346)
106 cd08188 Fe-ADH4 Iron-containin 38.2 82 0.0018 33.5 6.7 48 133-181 85-149 (377)
107 cd08174 G1PDH-like Glycerol-1- 37.0 2.1E+02 0.0046 29.7 9.5 35 134-172 76-110 (331)
108 TIGR01162 purE phosphoribosyla 36.6 1.3E+02 0.0027 28.4 6.8 32 135-172 56-87 (156)
109 cd08182 HEPD Hydroxyethylphosp 36.6 1.9E+02 0.0042 30.4 9.2 44 135-179 79-143 (367)
110 PF00365 PFK: Phosphofructokin 36.5 46 0.00099 34.2 4.3 39 135-177 94-132 (282)
111 PF00465 Fe-ADH: Iron-containi 36.5 90 0.0019 32.9 6.7 99 68-182 23-144 (366)
112 KOG2178 Predicted sugar kinase 36.3 78 0.0017 34.1 6.0 58 135-206 170-227 (409)
113 PTZ00287 6-phosphofructokinase 35.9 69 0.0015 39.9 6.2 47 135-183 930-984 (1419)
114 TIGR02478 6PF1K_euk 6-phosphof 35.9 93 0.002 36.5 7.1 42 135-176 480-523 (745)
115 cd08549 G1PDH_related Glycerol 35.5 1.2E+02 0.0025 31.8 7.3 32 134-169 81-112 (332)
116 cd00765 Pyrophosphate_PFK Phos 33.0 80 0.0017 35.6 5.8 45 136-182 169-221 (550)
117 cd02007 TPP_DXS Thiamine pyrop 31.9 77 0.0017 30.5 4.9 67 134-200 97-176 (195)
118 PLN02251 pyrophosphate-depende 31.9 95 0.0021 35.2 6.2 41 136-178 193-236 (568)
119 cd08198 DHQS-like2 Dehydroquin 31.2 2.7E+02 0.0059 29.8 9.2 93 66-170 30-134 (369)
120 cd08178 AAD_C C-terminal alcoh 31.0 2.3E+02 0.0051 30.3 8.9 47 134-181 79-153 (398)
121 PRK13805 bifunctional acetalde 30.7 2.8E+02 0.0061 33.1 10.2 98 43-153 455-558 (862)
122 cd08193 HVD 5-hydroxyvalerate 29.2 2.5E+02 0.0055 29.7 8.7 46 134-180 84-146 (376)
123 TIGR02478 6PF1K_euk 6-phosphof 28.7 1.7E+02 0.0037 34.3 7.7 42 135-176 96-155 (745)
124 cd01836 FeeA_FeeB_like SGNH_hy 27.4 1.5E+02 0.0032 27.5 5.9 59 136-202 44-102 (191)
125 PTZ00468 phosphofructokinase f 26.0 1.1E+02 0.0024 38.0 5.6 46 136-183 199-252 (1328)
126 PRK10586 putative oxidoreducta 25.7 3.1E+02 0.0067 29.1 8.5 38 135-176 88-127 (362)
127 COG1979 Uncharacterized oxidor 25.6 3.3E+02 0.0071 29.0 8.3 87 44-142 5-94 (384)
128 TIGR03846 sulfopy_beta sulfopy 25.2 1.9E+02 0.0041 27.5 6.2 77 134-210 59-153 (181)
129 cd08191 HHD 6-hydroxyhexanoate 25.1 3.6E+02 0.0078 28.7 9.0 47 134-181 80-143 (386)
130 cd00764 Eukaryotic_PFK Phospho 25.0 1.6E+02 0.0034 34.8 6.5 42 135-176 99-158 (762)
131 PRK05948 precorrin-2 methyltra 24.5 7.1E+02 0.015 24.8 10.5 34 134-169 93-130 (238)
132 TIGR03590 PseG pseudaminic aci 23.2 3.7E+02 0.0081 27.1 8.3 35 126-169 234-268 (279)
133 PTZ00287 6-phosphofructokinase 22.9 1.5E+02 0.0034 37.0 6.1 49 135-183 273-327 (1419)
134 cd04502 SGNH_hydrolase_like_7 21.9 1E+02 0.0022 28.1 3.6 60 137-203 27-86 (171)
135 PRK06756 flavodoxin; Provision 21.7 3.2E+02 0.0069 24.5 6.8 27 67-95 2-28 (148)
136 PLN02948 phosphoribosylaminoim 21.7 3.8E+02 0.0081 30.5 8.6 32 135-172 468-499 (577)
137 PRK14021 bifunctional shikimat 20.6 3.9E+02 0.0085 30.0 8.5 42 134-177 270-313 (542)
138 COG0205 PfkA 6-phosphofructoki 20.5 4.6E+02 0.01 27.9 8.4 38 135-176 96-133 (347)
139 cd00764 Eukaryotic_PFK Phospho 20.4 4.6E+02 0.0099 31.0 9.1 41 135-176 480-523 (762)
No 1
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-74 Score=618.32 Aligned_cols=392 Identities=34% Similarity=0.597 Sum_probs=317.2
Q ss_pred cCchhhhhhhhHHhhcCCcccccccccccCceeecCCccc--------------------------ccCCCCCCeEEEEE
Q 010042 20 RPLHDLLHRSSEEAAATPKSKILNNYYIPNYILVSGSEVQ--------------------------RSSLIPSCPVLVFI 73 (519)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~--------------------------~~~~~~~~~vlviv 73 (519)
+-+|+.+.. .....|..+.+++.++|++++.+....+ .....+.+|++|||
T Consensus 202 ~~~h~~~~~---~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PLlVfv 278 (634)
T KOG1169|consen 202 IRVHDKCKS---ELSQECDLGELKDHILPPSTLRPARTARVASDHSGLPGEKSEEVTDAKKMQQLLVTDPPDWRPLLVFV 278 (634)
T ss_pred eeeecchHH---HHhhhccChhhhhccCCceeeecccccccccccccccccccccccccccccccccCCCCCCcceEEEE
Confidence 455666654 3333477888999999999999875441 12234468999999
Q ss_pred cCCCCCCChhhHHHHHHHHhccCcEEEEeecC-chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHH
Q 010042 74 NSKSGGQLGGKLLLTYRSLLNENQVIDLGEKA-PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGV 152 (519)
Q Consensus 74 NPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~-p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~ 152 (519)
||||||++|..++.+|+.+||+.|||||+... |..++. ++.++ ...||+||||||||+|||+.
T Consensus 279 NpKSGg~~G~~ll~~f~~lLnp~QVfdl~~~~~p~~gL~-l~~~~---------------~~~riLVcGGDGTvGWVL~~ 342 (634)
T KOG1169|consen 279 NPKSGGQQGERLLRRFRYLLNPVQVFDLLKRGGPRPGLT-LFRDV---------------PDFRILVCGGDGTVGWVLGC 342 (634)
T ss_pred ecCCcccccHHHHHHHHHhcChhhEEecccCCCCchhHH-HHHhC---------------CcceEEEecCCCcchhhhhh
Confidence 99999999999999999999999999999874 877765 33332 35699999999999999999
Q ss_pred HhcCCCC---CCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCCCCCC
Q 010042 153 VSDLKLP---HSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIA 229 (519)
Q Consensus 153 l~~~~~~---~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~~~~~ 229 (519)
+.+++.. ..|||||+|+||||||||+|+||.++++.+.. +.++|+.|..+.+.++|+|+|.+.+.... ..
T Consensus 343 i~~~n~~~~~~~PpVAilPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v~~~~~~-----~~- 415 (634)
T KOG1169|consen 343 IDKLNKQNAIPPPPVAILPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLVEPQSGE-----LV- 415 (634)
T ss_pred HHHhhccccCCCCCeEEEecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceeeEEeeccccc-----cc-
Confidence 9987543 47999999999999999999999999887644 99999999999999999999998764221 00
Q ss_pred CCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHHhhhhc
Q 010042 230 PLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFL 309 (519)
Q Consensus 230 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~ 309 (519)
+ .+++.- . .+...+..+|+||||||+||+|+++||..|+++|++|+||++||++|+.+|++. ||+
T Consensus 416 ~----~~~~~~------~----~~~~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Yf~~G~q~-~f~ 480 (634)
T KOG1169|consen 416 Q----YSLKPP------E----KGDPVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWYFEFGTQE-TFA 480 (634)
T ss_pred c----ccccCC------C----cCCCCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeeeeeecchh-hHH
Confidence 0 000100 0 011123358999999999999999999999999999999999999999999865 776
Q ss_pred ccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCcEEEEE
Q 010042 310 APLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVG 389 (519)
Q Consensus 310 ~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LEVv~ 389 (519)
++ ++++...+++++ +++++.+++|.++++|+++|++|||||.++|++.+..+...+.+..+..|||++|||+
T Consensus 481 ~~-----ck~~~~~i~i~~---~~d~~dl~~p~sleGIv~LNIpS~ggG~nlWg~~~~~~~~~~~~~~~d~~dgliEvvg 552 (634)
T KOG1169|consen 481 AR-----CKNLHLHIKIEL---DGDGEDLELPKSLEGIVVLNIPSWGGGSNLWGNSNKSKGNFRGFSEADDDDGLIEVVG 552 (634)
T ss_pred Hh-----hcCCccceEEEE---cccceEccCCCCceeEEEEcccccccCcccccccCccccccccccccCCCcCeEEEEE
Confidence 54 455433456666 5666689999899999999999999999999987666656666778888899999999
Q ss_pred ecchhHHHHHHhcCCCccEEEe---ecE-EEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeeeEEeCCCC
Q 010042 390 FRDAWHGLVLLAPNGHGTRLAQ---ANR-VRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATPCC 465 (519)
Q Consensus 390 ~~~~~~~~~l~~~~~~~vrl~Q---~~~-v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~mL~~~~~ 465 (519)
+++.||++++++++.++.|++| .+. ++|...+ ..|||||||||.|+ |++|+|+|++|+.||+++.+
T Consensus 553 v~~~~h~~~~qvgL~~a~rigQ~~a~~~~~~i~~~k----~~PMQiDGEPW~Q~------p~tI~Ithk~q~~mL~~~~~ 622 (634)
T KOG1169|consen 553 VQDSWHLLQEQVGLESALRIGQRLAQCSERVIGTKK----TFPMQIDGEPWMQP------PCTIEITHKNQAPMLMKAAK 622 (634)
T ss_pred eccchhhhhhhhccchhhHHHHHhhccEEEEecccc----CcceecCCccccCC------CceEEEEecchHhhhhcccc
Confidence 9999999999999999999997 444 4477766 79999999999997 79999999999999999876
Q ss_pred CcCcc
Q 010042 466 RSRSI 470 (519)
Q Consensus 466 ~~~~~ 470 (519)
....-
T Consensus 623 ~~~~~ 627 (634)
T KOG1169|consen 623 EKRRR 627 (634)
T ss_pred cccCc
Confidence 54433
No 2
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-64 Score=525.09 Aligned_cols=335 Identities=36% Similarity=0.618 Sum_probs=279.2
Q ss_pred CCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 62 SLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 62 ~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
+..+++|++|||||||||++|.+++..|..+||+.|||||+..+|..+|+ +|+++ ..+||+|||
T Consensus 361 sSplmkPLLVFVNPKSGGNqGsK~lq~f~WyLNPRQVFDlsq~GPK~aLE-myRKV---------------~nLRILaCG 424 (1004)
T KOG0782|consen 361 SSPLMKPLLVFVNPKSGGNQGSKALQTFCWYLNPRQVFDLSQLGPKFALE-MYRKV---------------VNLRILACG 424 (1004)
T ss_pred CCCCCCceEEEecCCCCCcchHHHHHHHHHhcChhhheehhccCcHHHHH-HHHhc---------------cceEEEEec
Confidence 45567999999999999999999999999999999999999999999996 77764 358999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCC
Q 010042 142 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 221 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~ 221 (519)
|||||+|+|+.|+++++...||+||+|+||||||||.|+||..+ ..+.+.++|+.|.++.++.+|+|.+.++...
T Consensus 425 GDGTVGWiLStLD~L~l~p~PPvailPLGTGNDLARtlnWGGgy---tDEPvSkil~~ve~gtvVqLDRW~lhvEpNp-- 499 (1004)
T KOG0782|consen 425 GDGTVGWILSTLDNLNLPPYPPVAILPLGTGNDLARTLNWGGGY---TDEPVSKILQAVEHGTVVQLDRWRLHVEPNP-- 499 (1004)
T ss_pred CCCceeehhhhhhhcCCCCCCCeeEeecCCcchHHHhcccCCCc---CcchHHHHHHHHhcCcEEeeeeeeecccCCC--
Confidence 99999999999999999999999999999999999999999743 3467999999999999999999999876432
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHH
Q 010042 222 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 301 (519)
Q Consensus 222 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 301 (519)
+|++ -|+..+.. +.+-. + .|+||||+||||.|+++||..|+.+|++|++|++||+.|+-.
T Consensus 500 --~~~p---Ee~ddG~~--------~~LPL----~---VfnNYFSlGfDAHVtLeFHeSReANPekfNSRfrNkmfYaG~ 559 (1004)
T KOG0782|consen 500 --SCNP---EEEDDGMQ--------SALPL----T---VFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGL 559 (1004)
T ss_pred --CCCh---hhhcccch--------hccch----h---HhhccccccccceEEEEeccccccCHHHHHHHHhhhhhhcch
Confidence 1221 01000000 01111 1 699999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccccCCCCCCCcceEEEEEEecCCc---EEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCC
Q 010042 302 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQ---WEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPP 378 (519)
Q Consensus 302 g~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~---~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a 378 (519)
++.. ++.++++++.++++|.+ ||. .+.-+| +...|+++|||+|.+|..+|++|.. .-+|+++
T Consensus 560 afsD------fl~rSskDL~khi~vvC---DG~DlTPkIqeL--K~qCivFlNIprYcaGTmPWG~pgd----hhDfePq 624 (1004)
T KOG0782|consen 560 AFSD------FLKRSSKDLCKHITVVC---DGVDLTPKIQEL--KLQCIVFLNIPRYCAGTMPWGEPGD----HHDFEPQ 624 (1004)
T ss_pred hHHH------HHhhhhHHhhhheEEEe---cCccCChhhhhc--ccceEEEecchhhhcCccCCCCCCc----cccCCcc
Confidence 9998 56678899998888888 553 111122 4578999999999999999998753 3467899
Q ss_pred ccCCCcEEEEEecchhHHHHHHhcCCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeee
Q 010042 379 YVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVN 458 (519)
Q Consensus 379 ~vdDG~LEVv~~~~~~~~~~l~~~~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~ 458 (519)
..|||++||++|+-.+ ++.|++ .+++.|++||++|++.+.+ .+|||+||||.... |..|+|...+|+.
T Consensus 625 rhdDGyvEViGFTmas-LAALQv-GGhGERl~QCreV~l~T~K----aIPmQVDGEPC~LA------ps~Iri~lrnqa~ 692 (1004)
T KOG0782|consen 625 RHDDGYVEVIGFTMAS-LAALQV-GGHGERLAQCREVRLITNK----AIPMQVDGEPCLLA------PSIIRIGLRNQAP 692 (1004)
T ss_pred ccCCceEEEEeeeHHH-HHHHhh-cCcchhhhhceeEEEEecc----ccceeecCcchhcc------hhheEEeecccch
Confidence 9999999999997653 333333 4789999999999998887 69999999999874 7999999999999
Q ss_pred EEeCCC
Q 010042 459 MLATPC 464 (519)
Q Consensus 459 mL~~~~ 464 (519)
|+.+.-
T Consensus 693 Mvqk~K 698 (1004)
T KOG0782|consen 693 MVQKEK 698 (1004)
T ss_pred HHHHHh
Confidence 997663
No 3
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=100.00 E-value=5e-62 Score=522.76 Aligned_cols=432 Identities=29% Similarity=0.476 Sum_probs=329.1
Q ss_pred chhhhhhhhHHhhcCCcccccccccccCceeecC-Ccc--c----ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhc
Q 010042 22 LHDLLHRSSEEAAATPKSKILNNYYIPNYILVSG-SEV--Q----RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLN 94 (519)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~-~~~--~----~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~ 94 (519)
+||-|-+.-..+ |..+.-+--.|||--+... .++ + .+...+.+|++||+|.|||..+|.+++++|+++||
T Consensus 146 vh~~c~~~~~~~---cs~~~~~~svi~ptal~~~~~dg~~v~~~~a~~~~~~spllv~insksgd~qg~~~lrkfkq~ln 222 (1099)
T KOG1170|consen 146 VHDTCIGNLARA---CSLGHSALSVIPPTALKEVTPDGTAVFWEEAYGGPCGSPLLVFINSKSGDSQGQRFLRKFKQILN 222 (1099)
T ss_pred eehhhhhhHHhh---cccccccccccChhhhcccCCCcceeehhhhcCCCCCCceeEeecccCCCchhHHHHHhhhhhcC
Confidence 455554443333 4444445556776655432 222 2 34455678999999999999999999999999999
Q ss_pred cCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcc
Q 010042 95 ENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 174 (519)
Q Consensus 95 ~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGND 174 (519)
+.|||||...+|.-+|+ ++.++ +.+||+||||||+|+||+..+..++++.++.++++|+|||||
T Consensus 223 p~qVfdll~~gp~~gL~-~f~~~---------------d~friLvcggdGsv~wvls~~ds~~lh~kcql~vlplgtgnd 286 (1099)
T KOG1170|consen 223 PIQVFDLIAGGPDFGLT-FFSHF---------------ESFRILVCGGDGSVGWVLSAIDRLNLHSKCQLAVLPLGTGND 286 (1099)
T ss_pred HHHHHHHHccCcchhhh-hhhcc---------------cceEEEEecCCCCCcchHHHHHhccchhhcccccccCCChHH
Confidence 99999999889988885 55554 468999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecC-----------------------------------
Q 010042 175 IPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKA----------------------------------- 219 (519)
Q Consensus 175 lAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~----------------------------------- 219 (519)
+||+||||..++. ..-+.++++.+.++.++.+|+|.|...-..
T Consensus 287 larvlgwg~a~~d--dt~~p~il~~~eRastkmldrwsvm~~e~~~~~~~~~~~~~v~~~~~~~e~~~i~~~e~q~~t~l 364 (1099)
T KOG1170|consen 287 LARVLGWGHAFYD--DTLLPQILRTMERASTKMLDRWSVMAIEGPQADAVRRYIEKVETFLEAEETWDIIHAENQLATTL 364 (1099)
T ss_pred HHHHhcccccCch--hhccHHHHHHHHhhhhhhhhcchhhhhhccccchHHHHHHHHHHhcccchhhhhhhhhhhhhhhH
Confidence 9999999975433 234568999999999999999998611000
Q ss_pred --------------------------------------------------------------------------------
Q 010042 220 -------------------------------------------------------------------------------- 219 (519)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (519)
T Consensus 365 ~kiL~s~~~t~~i~~~~~~c~~~~~f~~k~~ka~~s~~~nl~~s~a~~~k~spa~e~~~~~~~~~~~es~assv~~~~t~ 444 (1099)
T KOG1170|consen 365 RKILHSVSHTYSILENNTLCTKREDFVKKRSKATPSVLSNLSSSSACSPKCSPAGEDLPQLFEILHSESSASSVLTALSA 444 (1099)
T ss_pred HhhhccccchhhhhhhccccchHHHHHHHHhhcccchhccCCchhhccccCCccccchhHHHHHhhhhhhhhhccCCCch
Confidence
Q ss_pred -------------CC--------------------------------------------CCCCCCCCC---CCCC-----
Q 010042 220 -------------PK--------------------------------------------EGSFDPIAP---LELP----- 234 (519)
Q Consensus 220 -------------~~--------------------------------------------~g~~~~~~~---~~~~----- 234 (519)
+. ++.+|+-.- -.|.
T Consensus 445 ~~~~~l~~gt~~~~~~g~t~~p~~~~~~~~~~~i~~~r~eL~~kans~kks~s~~i~~te~a~De~~~~~~~~L~eseek 524 (1099)
T KOG1170|consen 445 RTYDELEIGTVHPPTPGATREPSTAYDDDEENEIVENRKELDQKANSLKKSVSTIIDITEGAPDEPRIYSDTTLNESEEK 524 (1099)
T ss_pred hhhhhhhhccccCCCCCccCCCCccccchhhhhhcccHHHHhHHhhhhhccHHHhHHHhhcCCCcccccchhhhhhhHhh
Confidence 00 000000000 0000
Q ss_pred ---cccccc----------------------ccc-------------c-----cccccc--------------cCCcc-c
Q 010042 235 ---HSLHAF----------------------HRV-------------S-----QKDKLN--------------VEGHH-T 256 (519)
Q Consensus 235 ---~~~~~~----------------------~r~-------------~-----~~~~~~--------------~~~~~-~ 256 (519)
++++.. .|. + ..|.++ +.+.| .
T Consensus 525 m~~ks~~~~~~se~d~~~~~~s~~~~~~spl~rl~s~~~ls~ggs~~s~~~~~d~dtl~al~~~~~~p~~d~g~seS~L~ 604 (1099)
T KOG1170|consen 525 MKSKSLHPICSSEDDMKQHSDSSLYADYSPLERLSSGGGLSAGGSTLSPARASDSDTLSALKERKRTPGSDLGLSESHLR 604 (1099)
T ss_pred hhhccCCCcccCccccccccchhhccccchhhccCCCCCcccCccccCcccccccchhhhhhccccCCcccccccccccc
Confidence 000000 000 0 001111 00110 0
Q ss_pred ----c--ccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHHhhhhcccccCCCCCCCcceEEEEEEe
Q 010042 257 ----F--RGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMK 330 (519)
Q Consensus 257 ----~--~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~~~~~i~l~v~~ 330 (519)
| ...|+||||||+||.|++.||..|+.||+++.||.+|++||++.|.|+ |+|++|||+.|++++++
T Consensus 605 sa~~y~EkCVMNNYFGIGlDAKISLDFhnKReEhPeKcrSR~kn~MWYGvLGtKe------LLhrTyrnLEQRV~LEC-- 676 (1099)
T KOG1170|consen 605 SAGQYKEKCVMNNYFGIGLDAKISLDFHNKREEHPEKCRSRSKNFMWYGVLGTKE------LLHRTYRNLEQRVKLEC-- 676 (1099)
T ss_pred cccchhhhhhhccccccccceeEeeecccccccChHHHhHHhhhcchhhhcchHH------HHHHHHHhHHHHeeeec--
Confidence 1 247999999999999999999999999999999999999999999999 89999999999888888
Q ss_pred cCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCcEEEEEecchhHHHHHHhcCCCccEEE
Q 010042 331 KQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLA 410 (519)
Q Consensus 331 ~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LEVv~~~~~~~~~~l~~~~~~~vrl~ 410 (519)
||+ ++++| ++++|||+|||||.||.|+|+.+ ..++.|+++++||+.||||++.++.+++...+.+.+++||+
T Consensus 677 -DG~--~i~lP-~LQGIviLNIpSyaGGtNFWGsn----k~dd~f~apSfDDriLEVVAvFGsvqMA~SRvI~LqhHRIA 748 (1099)
T KOG1170|consen 677 -DGV--PIDLP-SLQGIVILNIPSYAGGTNFWGSN----KDDDEFTAPSFDDRILEVVAVFGSVQMATSRVIRLQHHRIA 748 (1099)
T ss_pred -CCc--ccCCc-ccceeEEEecccccCcccccCCC----CCCCcccCCCcccceeEEeeeehhHHHHHHHHHHhhhhhhh
Confidence 888 89998 99999999999999999999965 35789999999999999999999988887777777889999
Q ss_pred eecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeeeEEeCC----------CCCcCcccCCCCCCCcC
Q 010042 411 QANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATP----------CCRSRSINDAPSPASII 480 (519)
Q Consensus 411 Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~mL~~~----------~~~~~~~~~~~~~~~~~ 480 (519)
||++|+|.+.. ++++|+|+|||+|.|| |..|+|.|+++++||+++ +-|++.....++|....
T Consensus 749 QCr~V~I~IlG--DE~IPVQvDGEaWlQP------PG~irIvHKNRaQmL~Rnr~fE~tLKsWeeKq~~~s~~~q~~~~~ 820 (1099)
T KOG1170|consen 749 QCRHVRIVILG--DEGIPVQVDGEAWLQP------PGIIRIVHKNRAQMLARNRVFEATLKSWEEKQEKASTTPQPSTPT 820 (1099)
T ss_pred hceEEEEEEec--CCCCceeecCccccCC------CceeeeehhhhHHHhhcchHHHHHHHHHHHHhhcccCCCCCCCcc
Confidence 99999999987 6789999999999997 799999999999999988 55666666666665522
Q ss_pred CcccCccccCCchhHHHHhhcccc
Q 010042 481 DEDCESIEDESSEDWEERRKFGAA 504 (519)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~f~~~ 504 (519)
.+..++||. .+...|+.+
T Consensus 821 ---~e~as~ed~---~q~~~~~~~ 838 (1099)
T KOG1170|consen 821 ---AEGASTEDI---IQMLTRARE 838 (1099)
T ss_pred ---cccCChhHH---HHHHHHHHH
Confidence 345556665 555555543
No 4
>PRK13057 putative lipid kinase; Reviewed
Probab=100.00 E-value=9.8e-42 Score=346.45 Aligned_cols=274 Identities=20% Similarity=0.255 Sum_probs=209.8
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 010042 70 LVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 147 (519)
Q Consensus 70 lvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl-~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~ 147 (519)
+||+||.||++. ..+..+++.|..... +.+ ..+.++++.+ +.+.++ .+...|||+|||||||
T Consensus 1 ~~I~Np~sg~~~--~~~~~i~~~l~~~g~~~~~~~t~~~~~a~~-~~~~~~-------------~~~d~iiv~GGDGTv~ 64 (287)
T PRK13057 1 LLLVNRHARSGR--AALAAARAALEAAGLELVEPPAEDPDDLSE-VIEAYA-------------DGVDLVIVGGGDGTLN 64 (287)
T ss_pred CEEECCCCCCcc--hhHHHHHHHHHHcCCeEEEEecCCHHHHHH-HHHHHH-------------cCCCEEEEECchHHHH
Confidence 489999999876 467788888865432 222 2234555433 222211 2345899999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCCCC
Q 010042 148 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDP 227 (519)
Q Consensus 148 ~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~~~ 227 (519)
+|+|+|.. .++|||+||+||||||||+||++. ++.++++.+..++++++|+++++-
T Consensus 65 ~v~~~l~~----~~~~lgiiP~GT~Ndfar~Lg~~~--------~~~~a~~~i~~~~~~~vD~g~~~~------------ 120 (287)
T PRK13057 65 AAAPALVE----TGLPLGILPLGTANDLARTLGIPL--------DLEAAARVIATGQVRRIDLGWVNG------------ 120 (287)
T ss_pred HHHHHHhc----CCCcEEEECCCCccHHHHHcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC------------
Confidence 99999975 468999999999999999999985 578889999999999999998740
Q ss_pred CCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHHhhh
Q 010042 228 IAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGW 307 (519)
Q Consensus 228 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~ 307 (519)
++|+|++|+|+||.|++.++..++ +..++++|+..+++.
T Consensus 121 -------------------------------~~f~n~~g~G~da~v~~~~~~~~k--------~~~G~~aY~~~~~~~-- 159 (287)
T PRK13057 121 -------------------------------HYFFNVASLGLSAELARRLTKELK--------RRWGTLGYAIAALRV-- 159 (287)
T ss_pred -------------------------------EEEEEEEecCccHHHHHHhhHHhh--------ccCChhHHHHHHHHH--
Confidence 279999999999999998876543 345899999999998
Q ss_pred hcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCcEEE
Q 010042 308 FLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEI 387 (519)
Q Consensus 308 f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LEV 387 (519)
+++ ++++ .+++++ ||+ ..+. +...++|+|+++||||+.++| .++++||+|||
T Consensus 160 ----l~~--~~~~--~~~l~~---d~~--~~~~--~~~~~~v~N~~~~gg~~~~~p-------------~a~~~DG~ldv 211 (287)
T PRK13057 160 ----LRR--SRPF--TAEIEH---DGR--TERV--KTLQVAVGNGRYYGGGMTVAH-------------DATIDDGRLDL 211 (287)
T ss_pred ----Hhh--CCCe--EEEEEE---CCE--EEEE--EEEEEEEecCcccCCCcccCC-------------CCCCCCceEEE
Confidence 432 2333 355666 665 3333 456788999999999999987 47899999999
Q ss_pred EEecchh--HHHHHH--h--c---CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeee
Q 010042 388 VGFRDAW--HGLVLL--A--P---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVN 458 (519)
Q Consensus 388 v~~~~~~--~~~~l~--~--~---~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~ 458 (519)
++++... .++.++ + + ..+.++..++++++|++.+ ++++|+|||.+... |++|+|.+ +.++
T Consensus 212 ~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~~----~~~~~~DGE~~~~~------p~~i~v~p-~al~ 280 (287)
T PRK13057 212 YSLEVAHWWRLLALLPALRRGRHGEWPDVRAFRTTELELRTRK----PRPINTDGELTTYT------PAHFRVLP-KALR 280 (287)
T ss_pred EEecCCCHHHHHHHHHHHhcCCccCCCcEEEEEeeEEEEEeCC----CcEEeeCCccCCCC------CEEEEEEC-CeEE
Confidence 9998753 233322 1 1 2346889999999999876 78999999999763 79999996 5999
Q ss_pred EEeCC
Q 010042 459 MLATP 463 (519)
Q Consensus 459 mL~~~ 463 (519)
++++.
T Consensus 281 v~~p~ 285 (287)
T PRK13057 281 VLAPP 285 (287)
T ss_pred EEcCC
Confidence 99865
No 5
>PRK13059 putative lipid kinase; Reviewed
Probab=100.00 E-value=3e-41 Score=344.37 Aligned_cols=278 Identities=19% Similarity=0.180 Sum_probs=209.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q--V--~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
++++||+||.||++++.+.+..+++.|.... + +..+ ...+ .+.. +... .+....|||+||
T Consensus 2 ~~~~~I~NP~aG~g~~~~~~~~i~~~l~~~g~~~~~~~~~--~~~~-~~~~-~~~~------------~~~~d~vi~~GG 65 (295)
T PRK13059 2 KKVKFIYNPYSGENAIISELDKVIRIHQEKGYLVVPYRIS--LEYD-LKNA-FKDI------------DESYKYILIAGG 65 (295)
T ss_pred cEEEEEECCcccchhHHHHHHHHHHHHHHCCcEEEEEEcc--Ccch-HHHH-HHHh------------hcCCCEEEEECC
Confidence 5789999999999988888888888776543 1 2222 1222 1211 1110 123457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 222 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~ 222 (519)
|||||+|+|+|.+. ..++|||+||+||||||||+||++. ++.++++.|..++++++|+++++-
T Consensus 66 DGTv~evv~gl~~~--~~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~v~~------- 128 (295)
T PRK13059 66 DGTVDNVVNAMKKL--NIDLPIGILPVGTANDFAKFLGMPT--------DIGEACEQILKSKPKKVDLGKIND------- 128 (295)
T ss_pred ccHHHHHHHHHHhc--CCCCcEEEECCCCHhHHHHHhCCCC--------CHHHHHHHHHhCCcEEeeEEEECC-------
Confidence 99999999999753 2468999999999999999999986 688899999999999999998741
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHH
Q 010042 223 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 302 (519)
Q Consensus 223 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 302 (519)
++|+|++|+|+||+|++.++...+ +.+++++|+..+
T Consensus 129 ------------------------------------~~f~n~~~~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~ 164 (295)
T PRK13059 129 ------------------------------------KYFINVASTGLFTDVSQKTDVNLK--------NTIGKLAYYLKG 164 (295)
T ss_pred ------------------------------------EEEEEEEeeeechhhhhhccHHHh--------hCcchHHHHHHH
Confidence 279999999999999988764332 345899999999
Q ss_pred HHhhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCC
Q 010042 303 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 382 (519)
Q Consensus 303 ~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdD 382 (519)
+++ ++. ++.+ .++|++ ||+ .++. +...++|+|.+++|| +.++| .++++|
T Consensus 165 ~~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~N~~~~Gg-~~~~p-------------~a~~~D 213 (295)
T PRK13059 165 LEE------LPN--FRKL--KVKVTS---EEV--NFDG--DMYLMLVFNGQTAGN-FNLAY-------------KAEVDD 213 (295)
T ss_pred HHH------Hhc--CCCe--eEEEEE---CCE--EEEe--eEEEEEEEcCccccC-cccCC-------------cccCCC
Confidence 998 331 2332 356666 565 3432 567788999998874 67776 478999
Q ss_pred CcEEEEEecchhH--HHHHH----hc---CCCc-cEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEE
Q 010042 383 GLLEIVGFRDAWH--GLVLL----AP---NGHG-TRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 452 (519)
Q Consensus 383 G~LEVv~~~~~~~--~~~l~----~~---~~~~-vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~ 452 (519)
|+|||+++++... ++.++ .+ ..+. ++..++++++|+..+ ++++|+|||..... |++|++.
T Consensus 214 G~Ldv~i~~~~~~~~~l~~~~~~~~G~~~~~~~~v~~~~~~~i~i~~~~----~~~~~~DGE~~~~~------p~~i~v~ 283 (295)
T PRK13059 214 GLLDVIIIKACPIIDLIPLFIKVLKGEHLEDVNGLIYFKTDKLEIESNE----EIVTDIDGERGPDF------PLNIECI 283 (295)
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHcCCccCCCccEEEEEeeEEEEEeCC----CceEEeCCCcCCCC------cEEEEEe
Confidence 9999999998643 22221 11 1234 888899999999865 78999999998763 8999999
Q ss_pred eCCeeeEEeCC
Q 010042 453 HLRQVNMLATP 463 (519)
Q Consensus 453 ~~~~~~mL~~~ 463 (519)
+ ++++++++.
T Consensus 284 p-~al~v~~p~ 293 (295)
T PRK13059 284 K-GGLKVLGIL 293 (295)
T ss_pred c-CeeEEEecC
Confidence 7 599999964
No 6
>PRK13054 lipid kinase; Reviewed
Probab=100.00 E-value=1.2e-40 Score=340.59 Aligned_cols=287 Identities=18% Similarity=0.162 Sum_probs=210.4
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 64 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 64 ~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl-~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
++++.++||+||+|++ .+.+..+.+.|....+ +.+ ....++++.+ +.+.+. .++...|||+|
T Consensus 1 ~~~~~~~~i~N~~~~~---~~~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~G 64 (300)
T PRK13054 1 MTFPKSLLILNGKSAG---NEELREAVGLLREEGHTLHVRVTWEKGDAAR-YVEEAL------------ALGVATVIAGG 64 (300)
T ss_pred CCCceEEEEECCCccc---hHHHHHHHHHHHHcCCEEEEEEecCCCcHHH-HHHHHH------------HcCCCEEEEEC
Confidence 3568899999999863 3445555555654332 333 2235566543 322221 12345799999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCC
Q 010042 142 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 221 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~ 221 (519)
||||||+|+|++.+.....+++||+||+||||||||+||++. ++.++++.|..++++++|+++++-
T Consensus 65 GDGTl~evv~~l~~~~~~~~~~lgiiP~GTgNdfar~lgi~~--------~~~~a~~~i~~g~~~~iDlg~v~~------ 130 (300)
T PRK13054 65 GDGTINEVATALAQLEGDARPALGILPLGTANDFATAAGIPL--------EPDKALKLAIEGRAQPIDLARVND------ 130 (300)
T ss_pred CccHHHHHHHHHHhhccCCCCcEEEEeCCcHhHHHHhcCCCC--------CHHHHHHHHHhCCceEEEEEEEcC------
Confidence 999999999999753223468999999999999999999985 578899999999999999998751
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHH
Q 010042 222 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 301 (519)
Q Consensus 222 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 301 (519)
+++|+|.+|+||||+|++..+... ++..++++|+..
T Consensus 131 ------------------------------------~~~f~n~~~~G~~a~v~~~~~~~~--------k~~~G~~~Y~~~ 166 (300)
T PRK13054 131 ------------------------------------RTYFINMATGGFGTRVTTETPEKL--------KAALGGVAYLIH 166 (300)
T ss_pred ------------------------------------ceEEEEEeecchhHHHHHhhHHHH--------HhccchHHHHHH
Confidence 027999999999999998886533 234689999999
Q ss_pred HHHhhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccC
Q 010042 302 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVD 381 (519)
Q Consensus 302 g~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vd 381 (519)
+++. +++ ++++ .++|+. ||+ .++. +...++|+|.++||||+.++| .+.++
T Consensus 167 ~l~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~N~~~~ggg~~~~p-------------~a~~~ 216 (300)
T PRK13054 167 GLMR------MDT--LKPD--RCEIRG---PDF--HWQG--DALVIGIGNGRQAGGGQQLCP-------------EALIN 216 (300)
T ss_pred HHHH------Hhh--CCCe--EEEEEe---CCc--EEEe--eEEEEEEECCCcCCCCcccCC-------------CCcCC
Confidence 9988 432 2333 244554 554 3332 567889999999999999987 47899
Q ss_pred CCcEEEEEecchhHHHHHH----hc---CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeC
Q 010042 382 DGLLEIVGFRDAWHGLVLL----AP---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHL 454 (519)
Q Consensus 382 DG~LEVv~~~~~~~~~~l~----~~---~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~ 454 (519)
||+|||++++..+.++.++ .+ ..+.++..++++|+|+..+ ++++|+|||++... |++|++.+
T Consensus 217 DG~ldv~~~~~~~~~l~~l~~~~~g~~~~~~~v~~~~~~~v~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p- 285 (300)
T PRK13054 217 DGLLDLRILPAPQELLPTLLSTLTGGSEDNPNIIRARLPWLEIQAPH----ELTFNLDGEPLSGR------HFRIEVLP- 285 (300)
T ss_pred CCeEEEEEECCHHHHHHHHHHHHhCCCCCCCcEEEEECCEEEEEcCC----CCEEEeCCCcCCCc------cEEEEEEc-
Confidence 9999999998822222221 11 1234788899999998765 79999999998863 79999997
Q ss_pred CeeeEEeCCCC
Q 010042 455 RQVNMLATPCC 465 (519)
Q Consensus 455 ~~~~mL~~~~~ 465 (519)
+.+++|+++.|
T Consensus 286 ~al~vl~p~~~ 296 (300)
T PRK13054 286 AALRCRLPPDC 296 (300)
T ss_pred CeeEEEeCCCC
Confidence 59999997653
No 7
>PRK11914 diacylglycerol kinase; Reviewed
Probab=100.00 E-value=1.6e-40 Score=340.30 Aligned_cols=288 Identities=20% Similarity=0.153 Sum_probs=215.3
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EE-EeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 64 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID-LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 64 ~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~d-l~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
+.+++++||+||.||++.+.+.+..+.+.|..... +. +....++++.+ +.+.+. ..+...|||+|
T Consensus 6 ~~~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~~~~~~~~-~a~~~~------------~~~~d~vvv~G 72 (306)
T PRK11914 6 HEIGKVTVLTNPLSGHGAAPHAAERAIARLHHRGVDVVEIVGTDAHDARH-LVAAAL------------AKGTDALVVVG 72 (306)
T ss_pred CCCceEEEEECCCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeCCHHHHHH-HHHHHH------------hcCCCEEEEEC
Confidence 44689999999999999998888888888865432 22 22234555543 322211 02335799999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCC
Q 010042 142 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 221 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~ 221 (519)
||||||+|++++.. .++|||+||+||||||||+||++.+ +++++++.+.+++++++|+++|+...
T Consensus 73 GDGTi~evv~~l~~----~~~~lgiiP~GT~NdfAr~lg~~~~-------~~~~a~~~i~~g~~~~iDlg~v~~~~---- 137 (306)
T PRK11914 73 GDGVISNALQVLAG----TDIPLGIIPAGTGNDHAREFGIPTG-------DPEAAADVIVDGWTETVDLGRIQDDD---- 137 (306)
T ss_pred CchHHHHHhHHhcc----CCCcEEEEeCCCcchhHHHcCCCCC-------CHHHHHHHHHcCCceEEEEEEEecCC----
Confidence 99999999999964 4689999999999999999999841 47888899999999999999986210
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHH
Q 010042 222 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 301 (519)
Q Consensus 222 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 301 (519)
+. .++|+|++|+|+||.|+...++.|+ ..++++|...
T Consensus 138 -------------------------------~~---~~~f~n~~~~G~~a~v~~~~~~~k~---------~~G~~aY~~~ 174 (306)
T PRK11914 138 -------------------------------GI---VKWFGTVAATGFDSLVTDRANRMRW---------PHGRMRYNLA 174 (306)
T ss_pred -------------------------------CC---cEEEEEEEeeehHHHHHHHHHhccc---------cCCchhhHHH
Confidence 00 1379999999999999988765432 2478999999
Q ss_pred HHHhhhhcccccCCCCCCCcceEEEEEEecCC-cEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCcc
Q 010042 302 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQG-QWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYV 380 (519)
Q Consensus 302 g~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG-~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~v 380 (519)
+++. +++ .+++ .++|++ || + .++. ++.+++|+|.++||||+.++| .+.+
T Consensus 175 ~l~~------l~~--~~~~--~~~i~~---dg~~--~~~~--~~~~~~v~N~~~~GG~~~~~p-------------~a~~ 224 (306)
T PRK11914 175 MLAE------LSK--LRPL--PFRLVL---DGTE--EIVT--DLTLAAFGNTRSYGGGMLICP-------------NADH 224 (306)
T ss_pred HHHH------HHh--cCCC--cEEEEE---eCCe--EEEe--eEEEEEEeCcccccCCceeCC-------------CCcC
Confidence 9988 432 2333 367777 45 3 2332 567888999999999999988 4789
Q ss_pred CCCcEEEEEecchhH--HHHHH--hcC-----CCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEE
Q 010042 381 DDGLLEIVGFRDAWH--GLVLL--APN-----GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEI 451 (519)
Q Consensus 381 dDG~LEVv~~~~~~~--~~~l~--~~~-----~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I 451 (519)
+||+|||++++.... ++.++ +.. .+.++..++++++|+.. ++++++|||+.... |++|++
T Consensus 225 ~DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~i~i~~~-----~~~~~~DGE~~~~~------p~~i~v 293 (306)
T PRK11914 225 TDGLLDITMVQSASRTRLLRLFPTVFKGTHVELDEVSTARAKTVHVECP-----GINAYADGDFACPL------PAEISA 293 (306)
T ss_pred CCCcEEEEEEecCCHHHHHHHHHHhcCCcccCCCcEEEEEeEEEEEEcC-----CcceecCCCcCCCC------ceEEEE
Confidence 999999999987543 33222 111 23578889999999874 36899999998753 799999
Q ss_pred EeCCeeeEEeCCC
Q 010042 452 SHLRQVNMLATPC 464 (519)
Q Consensus 452 ~~~~~~~mL~~~~ 464 (519)
.+ +.++++++.+
T Consensus 294 ~p-~al~v~vp~~ 305 (306)
T PRK11914 294 VP-GALQILRPRP 305 (306)
T ss_pred Ec-CeEEEECCCC
Confidence 97 5999998654
No 8
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=100.00 E-value=1.6e-40 Score=338.69 Aligned_cols=282 Identities=16% Similarity=0.149 Sum_probs=204.0
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 010042 69 VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 146 (519)
Q Consensus 69 vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl-~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV 146 (519)
+++|+||+||..+ .+..+.+.|....+ +.+ ....++++.+ +.+.+. .++...|||+||||||
T Consensus 2 ~~~I~N~~~~~~~---~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDGTi 65 (293)
T TIGR03702 2 ALLILNGKQADNE---DVREAVGDLRDEGIQLHVRVTWEKGDAQR-YVAEAL------------ALGVSTVIAGGGDGTL 65 (293)
T ss_pred EEEEEeCCccchh---HHHHHHHHHHHCCCeEEEEEecCCCCHHH-HHHHHH------------HcCCCEEEEEcCChHH
Confidence 6899999987332 34455555654332 222 2234566543 333221 1234589999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCCC
Q 010042 147 SWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFD 226 (519)
Q Consensus 147 ~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~~ 226 (519)
|+|+|+|........+|||+||+||||||||+||++. +++++++.+..++++++|+++++-
T Consensus 66 ~ev~ngl~~~~~~~~~~lgiiP~GTgNdfAr~l~ip~--------~~~~a~~~i~~g~~~~iDlg~v~~----------- 126 (293)
T TIGR03702 66 REVATALAQIRDDAAPALGLLPLGTANDFATAAGIPL--------EPAKALKLALNGAAQPIDLARVNG----------- 126 (293)
T ss_pred HHHHHHHHhhCCCCCCcEEEEcCCchhHHHHhcCCCC--------CHHHHHHHHHhCCceeeeEEEECC-----------
Confidence 9999999753222357899999999999999999986 578899999999999999998741
Q ss_pred CCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHHhh
Q 010042 227 PIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQG 306 (519)
Q Consensus 227 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~ 306 (519)
.++|+|.+|+||||+|+..++...+ +..++++|+..+++.
T Consensus 127 -------------------------------~~~f~n~~~~G~da~v~~~~~~~~k--------~~~G~~aY~~~~l~~- 166 (293)
T TIGR03702 127 -------------------------------KHYFLNMATGGFGTRVTTETSEKLK--------KALGGAAYLITGLTR- 166 (293)
T ss_pred -------------------------------ccEEEEEeecccchHhhhhhhHHHH--------hccchHHHHHHHHHH-
Confidence 0279999999999999998876432 356899999999988
Q ss_pred hhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCcEE
Q 010042 307 WFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLE 386 (519)
Q Consensus 307 ~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LE 386 (519)
++. ++.+ .++++. ++. .+. .+...++++|+++||||+.+.| .+.++||+||
T Consensus 167 -----l~~--~~~~--~~~i~~---~~~--~~~--~~~~~~~v~N~~~~GGg~~i~P-------------~A~~~DG~Ld 217 (293)
T TIGR03702 167 -----FSE--LTAA--SCEFRG---PDF--HWE--GDFLALGIGNGRQAGGGQVLCP-------------DALINDGLLD 217 (293)
T ss_pred -----Hhh--CCCe--EEEEEE---CCE--EEE--eeEEEEEEECCCcCCCCceeCC-------------CCccCCceEE
Confidence 331 2332 234443 443 232 2567888999999999999988 4789999999
Q ss_pred EEEecchhHHHHHH---h-c-CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeeeEEe
Q 010042 387 IVGFRDAWHGLVLL---A-P-NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLA 461 (519)
Q Consensus 387 Vv~~~~~~~~~~l~---~-~-~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~mL~ 461 (519)
|++++..+.++.++ . + ....+...++++++|+..+ ++++|+|||.+... |++|++.+ +.++|++
T Consensus 218 v~~v~~~~~~~~~l~~~~~g~~~~~~~~~~~~~i~i~~~~----~~~~~vDGE~~~~~------p~~i~v~p-~al~v~~ 286 (293)
T TIGR03702 218 VRILPAPELLPATLSTLFGGDKNPEFVRARLPWLEIEAPQ----PLTFNLDGEPLSGR------HFRIEVLP-GALRCHL 286 (293)
T ss_pred EEEeCCHHHHHHHHHHHhcCCCCCcEEEEEcCEEEEEeCC----CcEEEECCCcCCCc------eEEEEEEc-CeEEEEc
Confidence 99998843333222 1 1 1223455677889998865 79999999999863 89999997 5999999
Q ss_pred CCCC
Q 010042 462 TPCC 465 (519)
Q Consensus 462 ~~~~ 465 (519)
+..|
T Consensus 287 p~~~ 290 (293)
T TIGR03702 287 PPGC 290 (293)
T ss_pred CCCC
Confidence 7653
No 9
>PRK13337 putative lipid kinase; Reviewed
Probab=100.00 E-value=3.6e-40 Score=337.71 Aligned_cols=282 Identities=17% Similarity=0.150 Sum_probs=213.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 144 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~-~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDG 144 (519)
++++||+||+||++.+.+.+..+.+.|....+ +++. .+.++++.+ +.+.+. .++...|||+||||
T Consensus 2 ~r~~~I~Np~aG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~GGDG 68 (304)
T PRK13337 2 KRARIIYNPTSGRELFKKNLPDVLQKLEQAGYETSAHATTGPGDATL-AAERAV------------ERKFDLVIAAGGDG 68 (304)
T ss_pred ceEEEEECCcccchhHHHHHHHHHHHHHHcCCEEEEEEecCCCCHHH-HHHHHH------------hcCCCEEEEEcCCC
Confidence 67999999999998887778777777765432 3321 234555543 322221 12335799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCC
Q 010042 145 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 224 (519)
Q Consensus 145 TV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~ 224 (519)
|||+|++++... ..+++||+||.||||||||.||++. +++++++.+..+.++++|+++++-
T Consensus 69 Tl~~vv~gl~~~--~~~~~lgiiP~GT~NdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~vn~--------- 129 (304)
T PRK13337 69 TLNEVVNGIAEK--ENRPKLGIIPVGTTNDFARALHVPR--------DIEKAADVIIEGHTVPVDIGKANN--------- 129 (304)
T ss_pred HHHHHHHHHhhC--CCCCcEEEECCcCHhHHHHHcCCCC--------CHHHHHHHHHcCCeEEEEEEEECC---------
Confidence 999999999753 3468999999999999999999985 588889999999999999998751
Q ss_pred CCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHH
Q 010042 225 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 304 (519)
Q Consensus 225 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k 304 (519)
++|+|.+|+|+||.|++.++...+ +..++++|...+++
T Consensus 130 ----------------------------------~~fln~~g~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~~~ 167 (304)
T PRK13337 130 ----------------------------------RYFINIAGGGRLTELTYEVPSKLK--------TMLGQLAYYLKGIE 167 (304)
T ss_pred ----------------------------------EEEEeeehhhHHHHHHHhcCHHHh--------cCcccHHHHHHHHH
Confidence 279999999999999988764332 34588999999988
Q ss_pred hhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCc
Q 010042 305 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGL 384 (519)
Q Consensus 305 ~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~ 384 (519)
. +.+ .+.+ .+++++ ||+ .++. +...++++|+++||||+.++| .+.++||+
T Consensus 168 ~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p-------------~a~~~DG~ 217 (304)
T PRK13337 168 M------LPS--LKAT--DVRIEY---DGK--LFQG--EIMLFLLGLTNSVGGFEKLAP-------------DASLDDGY 217 (304)
T ss_pred H------Hhh--CCCc--eEEEEE---CCe--EEEe--EEEEEEEEcCcccCCccccCC-------------cccCCCCe
Confidence 6 332 2333 355666 665 3332 566788999999999999987 47899999
Q ss_pred EEEEEecchh--HHHHHH--hc-----CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCC
Q 010042 385 LEIVGFRDAW--HGLVLL--AP-----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLR 455 (519)
Q Consensus 385 LEVv~~~~~~--~~~~l~--~~-----~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~ 455 (519)
|||++++... .++.++ .. ..+.++..++++++|+..+ ++++|+|||..... |++|++.+ +
T Consensus 218 ldv~iv~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p-~ 286 (304)
T PRK13337 218 FDLIIVKKANLAELIHIATLALRGEHIKHPKVIYTKANRIKVSSFD----KMQLNLDGEYGGKL------PAEFENLY-R 286 (304)
T ss_pred EEEEEEcCCCHHHHHHHHHHHHcCCcCCCCcEEEEEccEEEEEcCC----CCeEEeCCCcCCCC------CEEEEEec-c
Confidence 9999998763 333322 11 1235788899999999865 78999999999863 79999997 5
Q ss_pred eeeEEeCC
Q 010042 456 QVNMLATP 463 (519)
Q Consensus 456 ~~~mL~~~ 463 (519)
.+++++++
T Consensus 287 al~v~~p~ 294 (304)
T PRK13337 287 HIEVFVPK 294 (304)
T ss_pred eEEEEecc
Confidence 99999855
No 10
>PRK13055 putative lipid kinase; Reviewed
Probab=100.00 E-value=4e-40 Score=341.70 Aligned_cols=287 Identities=16% Similarity=0.168 Sum_probs=215.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE--eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL--GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl--~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
+++++||+||+||++++.+.+..+++.|....+ +.+ +...++++.+ +.+.+. .++...|||+||
T Consensus 2 ~~r~~iI~NP~sG~~~~~~~~~~i~~~l~~~g~~~~i~~t~~~~~~a~~-~~~~~~------------~~~~d~vvv~GG 68 (334)
T PRK13055 2 QKRARLIYNPTSGQEIMKKNVADILDILEQAGYETSAFQTTPEPNSAKN-EAKRAA------------EAGFDLIIAAGG 68 (334)
T ss_pred CceEEEEECCCCCchhHHHHHHHHHHHHHHcCCeEEEEEeecCCccHHH-HHHHHh------------hcCCCEEEEECC
Confidence 368999999999999988999999998876443 322 3234445432 222221 023358999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 222 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~ 222 (519)
|||||+|+++|... ...++|||||+||||||||+||++.+ ++.++++.+..++++++|+++++-
T Consensus 69 DGTl~evvngl~~~--~~~~~LgiiP~GTgNdfAr~Lgi~~~-------~~~~a~~~l~~g~~~~vD~g~v~~------- 132 (334)
T PRK13055 69 DGTINEVVNGIAPL--EKRPKMAIIPAGTTNDYARALKIPRD-------NPVEAAKVILKNQTIKMDIGRANE------- 132 (334)
T ss_pred CCHHHHHHHHHhhc--CCCCcEEEECCCchhHHHHHcCCCCc-------CHHHHHHHHHcCCcEEeeEEEECC-------
Confidence 99999999999752 34689999999999999999999851 477889999999999999998730
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHH
Q 010042 223 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 302 (519)
Q Consensus 223 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 302 (519)
.++|+|.+|+|+||.|+...+..++ +..++++|...+
T Consensus 133 -----------------------------------~~~F~n~ag~G~da~v~~~~~~~~k--------~~~G~laY~~~~ 169 (334)
T PRK13055 133 -----------------------------------DKYFINIAAGGSLTELTYSVPSQLK--------SMFGYLAYLAKG 169 (334)
T ss_pred -----------------------------------CcEEEEEehhccchHHHHhcCHHHH--------hhccHHHHHHHH
Confidence 0379999999999999988775443 345899999999
Q ss_pred HHhhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCC
Q 010042 303 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 382 (519)
Q Consensus 303 ~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdD 382 (519)
++. +++ ++.+ .++|++ ||+ ..+. +..+++++|.++||||+.++| .+.++|
T Consensus 170 ~~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~Gg~~~~~p-------------~a~~~D 219 (334)
T PRK13055 170 AEL------LPR--VSPV--PVRITY---DEG--VFEG--KISMFFLALTNSVGGFEQIVP-------------DAKLDD 219 (334)
T ss_pred HHH------HHh--cCCe--eEEEEE---CCE--EEEE--EEEEEEEEcCcccCCccccCC-------------CCcCCC
Confidence 988 432 2332 356666 565 2322 456788999999999999887 478999
Q ss_pred CcEEEEEecchh--HHHHH----Hh-c---CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEE
Q 010042 383 GLLEIVGFRDAW--HGLVL----LA-P---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 452 (519)
Q Consensus 383 G~LEVv~~~~~~--~~~~l----~~-~---~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~ 452 (519)
|+|||++++... .++.+ +. + ..+.++..++++|+|+... ..++++|+|||+.+.. |++|++.
T Consensus 220 G~ldv~i~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~~--~~~~~~~iDGE~~~~~------pv~i~v~ 291 (334)
T PRK13055 220 GKFTLIIVKTANLFELLHLMALILNGGKHIDDPRVIYIKTSKLTIEPLG--DDRLMVNLDGEYGGDA------PMTFENL 291 (334)
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCCCCcEEEEEccEEEEEeCC--CCcceEeeCCCcCCCC------cEEEEEE
Confidence 999999998763 23322 12 2 1235788899999998753 1258999999998763 8999999
Q ss_pred eCCeeeEEeCC
Q 010042 453 HLRQVNMLATP 463 (519)
Q Consensus 453 ~~~~~~mL~~~ 463 (519)
+ ++++|+++.
T Consensus 292 p-~al~v~~p~ 301 (334)
T PRK13055 292 K-QHIEFFANT 301 (334)
T ss_pred c-CeEEEEeCc
Confidence 7 599999854
No 11
>PRK00861 putative lipid kinase; Reviewed
Probab=100.00 E-value=2.7e-39 Score=330.44 Aligned_cols=279 Identities=18% Similarity=0.178 Sum_probs=208.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 144 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~-~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDG 144 (519)
+++++||+||.||++.+.+.++.++..|.+.--+++. ...++++.+ +.+.+. ..+...||++||||
T Consensus 2 ~~~~~iI~NP~sG~~~~~~~~~~i~~~l~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDG 68 (300)
T PRK00861 2 TRSACLIFNPVAGQGNPEVDLALIRAILEPEMDLDIYLTTPEIGADQ-LAQEAI------------ERGAELIIASGGDG 68 (300)
T ss_pred CceEEEEECCCCCCCchhhhHHHHHHHHHhcCceEEEEccCCCCHHH-HHHHHH------------hcCCCEEEEECChH
Confidence 4689999999999999888888888888653113322 234455433 322211 12345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCC
Q 010042 145 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 224 (519)
Q Consensus 145 TV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~ 224 (519)
|||+|++++.. ..++||+||+||||||||+||++. ++.++++.+.++.++++|+++++-
T Consensus 69 Tl~evv~~l~~----~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~iDlg~vn~--------- 127 (300)
T PRK00861 69 TLSAVAGALIG----TDIPLGIIPRGTANAFAAALGIPD--------TIEEACRTILQGKTRRVDVAYCNG--------- 127 (300)
T ss_pred HHHHHHHHHhc----CCCcEEEEcCCchhHHHHHcCCCC--------CHHHHHHHHHcCCcEEeeEEEECC---------
Confidence 99999999975 468999999999999999999986 578899999999999999998741
Q ss_pred CCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHH
Q 010042 225 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 304 (519)
Q Consensus 225 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k 304 (519)
++|+|.+|+|+||+|+...++..+ +..++++|+..+++
T Consensus 128 ----------------------------------~~fin~a~~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~l~ 165 (300)
T PRK00861 128 ----------------------------------QPMILLAGIGFEAETVEEADREAK--------NRFGILAYILSGLQ 165 (300)
T ss_pred ----------------------------------EEEEEEEeccHHHHHHHHhhHHHH--------hcccHHHHHHHHHH
Confidence 279999999999999998875443 34589999999999
Q ss_pred hhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCC----cCCccCCCCcccccccccCCCCCcc
Q 010042 305 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSF----SGGLDPWGKPFRKKLRERGLTPPYV 380 (519)
Q Consensus 305 ~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~----gGG~~~w~~~~~~~~~~~~~~~a~v 380 (519)
. +++ ++.+ .++|++ ||+ .++. +...++++|.+++ ++| .| .+.+
T Consensus 166 ~------l~~--~~~~--~~~i~~---dg~--~~~~--~~~~i~v~N~~~~~~~~~~g---~p-------------~a~~ 212 (300)
T PRK00861 166 Q------LRE--LESF--EVEIET---EDQ--IITT--NAVAVTVANAAPPTSVLAQG---PG-------------AVIP 212 (300)
T ss_pred H------hcc--CCCe--eEEEEE---CCe--EEEE--EEEEEEEECCCCcccccccC---CC-------------CCCC
Confidence 8 432 2333 355665 665 3332 5568899999754 334 12 4789
Q ss_pred CCCcEEEEEecchhH--HHH----HHh----c---CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcE
Q 010042 381 DDGLLEIVGFRDAWH--GLV----LLA----P---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTV 447 (519)
Q Consensus 381 dDG~LEVv~~~~~~~--~~~----l~~----~---~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~ 447 (519)
+||+|||++++.... ++. ++. + ..+.++..++++++|+..+ ++++|+|||..... |+
T Consensus 213 ~DG~ldv~iv~~~~~~~~l~~~~~l~~~~~~g~~~~~~~v~~~~~~~i~I~~~~----~~~~~~DGE~~~~~------p~ 282 (300)
T PRK00861 213 DDGLLDVTIVAPKNLAEAVAASYHLLQTALQGNPAERDDIGYLRAKQVKITTDP----PQKVVIDGEVVGTT------PI 282 (300)
T ss_pred CCceEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCCCCceEEEEccEEEEEeCC----CeEEEECCccCCCc------eE
Confidence 999999999987642 221 211 1 1235788999999999876 78999999998763 79
Q ss_pred EEEEEeCCeeeEEeCCC
Q 010042 448 VVEISHLRQVNMLATPC 464 (519)
Q Consensus 448 ~i~I~~~~~~~mL~~~~ 464 (519)
+|+|.+ +.++++++.+
T Consensus 283 ~i~v~p-~al~v~~p~~ 298 (300)
T PRK00861 283 EIECLP-RSLKVFAPLQ 298 (300)
T ss_pred EEEEEC-CEEEEEeCCC
Confidence 999996 5999998653
No 12
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=100.00 E-value=2.9e-39 Score=328.71 Aligned_cols=280 Identities=18% Similarity=0.207 Sum_probs=209.8
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 143 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~-~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGD 143 (519)
+++++||+||.||++.+.+.+..+++.|....+ +.+. ...++++.+ ..+... ..+...|||+|||
T Consensus 1 ~~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~~~~-~~~~~~------------~~~~d~ivv~GGD 67 (293)
T TIGR00147 1 MAEAPAILNPTAGKSNDNKPLREVIMLLREEGMEIHVRVTWEKGDAAR-YVEEAR------------KFGVDTVIAGGGD 67 (293)
T ss_pred CceEEEEECCCccchhhHHHHHHHHHHHHHCCCEEEEEEecCcccHHH-HHHHHH------------hcCCCEEEEECCC
Confidence 368999999999998888889998888765443 3322 223333322 211110 0234579999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCC
Q 010042 144 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 223 (519)
Q Consensus 144 GTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g 223 (519)
||+++|++++... ...|+||+||+||+|||||+||++. ++.++++.+.+++.+++|+++++-
T Consensus 68 GTl~~v~~~l~~~--~~~~~lgiiP~Gt~N~~a~~l~i~~--------~~~~~~~~l~~~~~~~~Dlg~v~~-------- 129 (293)
T TIGR00147 68 GTINEVVNALIQL--DDIPALGILPLGTANDFARSLGIPE--------DLDKAAKLVIAGDARAIDMGQVNK-------- 129 (293)
T ss_pred ChHHHHHHHHhcC--CCCCcEEEEcCcCHHHHHHHcCCCC--------CHHHHHHHHHcCCceEEEEEEECC--------
Confidence 9999999999753 2357899999999999999999985 577889999999999999988741
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCccccccc-eeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHH
Q 010042 224 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGG-FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 302 (519)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 302 (519)
++ |+|++|+|+||++++.++...+ +..++++|+..+
T Consensus 130 -----------------------------------~~~fln~~g~G~~a~v~~~~~~~~k--------~~~g~~~Y~~~~ 166 (293)
T TIGR00147 130 -----------------------------------QYCFINMAGGGFGTEITTETPEKLK--------AALGSLSYILSG 166 (293)
T ss_pred -----------------------------------eEEEEEEEeechhhHhHhhCCHHHH--------hccchHHHHHHH
Confidence 27 9999999999999988764332 345899999999
Q ss_pred HHhhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCC
Q 010042 303 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 382 (519)
Q Consensus 303 ~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdD 382 (519)
++. +. .++++ .++|++ ||+ .++. +...++++|+++||||+.++|. +.++|
T Consensus 167 l~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p~-------------a~~~D 216 (293)
T TIGR00147 167 LMR------MD--TLQPF--RCEIRG---EGE--HWQG--EAVVFLVGNGRQAGGGQKLAPD-------------ASIND 216 (293)
T ss_pred HHH------Hh--hCCCe--eEEEEE---CCe--EEEe--eEEEEEEeCCcccCCCcccCCc-------------cccCC
Confidence 987 42 23333 355666 565 3443 4566778899999999999873 78999
Q ss_pred CcEEEEEecchhH--HHHHH----hc---CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEe
Q 010042 383 GLLEIVGFRDAWH--GLVLL----AP---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 453 (519)
Q Consensus 383 G~LEVv~~~~~~~--~~~l~----~~---~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~ 453 (519)
|+|||+++++... ++.++ .+ ..+.++..++++++|+.++ ++++|+|||++... |+.|+|.+
T Consensus 217 G~l~v~~v~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p 286 (293)
T TIGR00147 217 GLLDLRIFTNDNLLPALVLTLMSDEGKHTDNPNIIYGKASRIDIQTPH----KITFNLDGEPLGGT------PFHIEILP 286 (293)
T ss_pred CeeEEEEEcCCCHHHHHHHHHHHhcCCCCCCCcEEEEEccEEEEEcCC----CcEEEeCCCcCCCC------cEEEEEEh
Confidence 9999999987642 22221 11 1345888999999999876 68999999999874 79999997
Q ss_pred CCeeeEE
Q 010042 454 LRQVNML 460 (519)
Q Consensus 454 ~~~~~mL 460 (519)
++++++
T Consensus 287 -~al~~~ 292 (293)
T TIGR00147 287 -AHLRCR 292 (293)
T ss_pred -hccEEe
Confidence 488876
No 13
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=324.73 Aligned_cols=286 Identities=23% Similarity=0.304 Sum_probs=220.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE---EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV---IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV---~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
++.+.+|+||.||++++.+.++.+++.|....+ ...+. .++++.+ +.+.+. ..+...||++||
T Consensus 2 ~~~~~~i~Np~sG~~~~~~~~~~~~~~l~~~g~~~~~~~t~-~~g~a~~-~a~~a~------------~~~~D~via~GG 67 (301)
T COG1597 2 MKKALLIYNPTSGKGKAKKLLREVEELLEEAGHELSVRVTE-EAGDAIE-IAREAA------------VEGYDTVIAAGG 67 (301)
T ss_pred CceEEEEEcccccccchhhHHHHHHHHHHhcCCeEEEEEee-cCccHHH-HHHHHH------------hcCCCEEEEecC
Confidence 478999999999999999999999998866432 22233 3356543 323221 123468999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 222 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~ 222 (519)
|||||+|+|+|.... .++||+||+||+|||||+||||. .++.++++.+.+++++.+|+++++
T Consensus 68 DGTv~evingl~~~~---~~~LgilP~GT~NdfAr~Lgip~-------~~~~~Al~~i~~g~~~~vDlg~~~-------- 129 (301)
T COG1597 68 DGTVNEVANGLAGTD---DPPLGILPGGTANDFARALGIPL-------DDIEAALELIKSGETRKVDLGQVN-------- 129 (301)
T ss_pred cchHHHHHHHHhcCC---CCceEEecCCchHHHHHHcCCCc-------hhHHHHHHHHHcCCeEEEeehhcC--------
Confidence 999999999998742 22399999999999999999996 148999999999999999998543
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHH
Q 010042 223 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 302 (519)
Q Consensus 223 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 302 (519)
+ ++||+|.+|+|+||+|+++++..|++ ..++++|+..+
T Consensus 130 ------------------------------~----~~~fin~a~~G~~a~~~~~~~~~~k~--------~~g~~~y~~~~ 167 (301)
T COG1597 130 ------------------------------G----RRYFINNAGIGFDAEVVAAVEEERKK--------GFGRLAYALAG 167 (301)
T ss_pred ------------------------------C----cceEEEEeecchhHHHHHhhcHHHHh--------ccchHHHHHHH
Confidence 1 02799999999999999999988763 45889999999
Q ss_pred HHhhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCC
Q 010042 303 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 382 (519)
Q Consensus 303 ~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdD 382 (519)
++. +. ..+++ .++|++ |++ .++. ....+++.|.+++|||..+.| .++++|
T Consensus 168 ~~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~~~~~~~~gg~~~~~p-------------~a~~~d 217 (301)
T COG1597 168 LAV------LA--RLKPF--RIEIEY---DGK--TFEG--EALALLVFNGNSYGGGMKLAP-------------DASLDD 217 (301)
T ss_pred HHh------cc--ccCCC--cEEEEE---cCc--EEEE--EEEEEEEecCcccccccccCC-------------cCCCCC
Confidence 987 32 22333 467777 444 2322 456788888889999999987 489999
Q ss_pred CcEEEEEecchh--HHHHHH--hcC-----CCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEe
Q 010042 383 GLLEIVGFRDAW--HGLVLL--APN-----GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 453 (519)
Q Consensus 383 G~LEVv~~~~~~--~~~~l~--~~~-----~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~ 453 (519)
|+|++++++... .++.++ +.. ...+.+.+++.++|+... ++++++|||+.+.. |++|++.+
T Consensus 218 G~l~~~i~~~~~~~~~~~l~~~~~~G~~~~~~~v~~~~~~~~~i~~~~----~~~~~~DGE~~~~~------p~~i~~~p 287 (301)
T COG1597 218 GLLDVYILKPQSLLELLALLPDLLRGKHLENPDVEYLRAKKLEITSDP----PIPVNLDGEYLGKT------PVTIEVLP 287 (301)
T ss_pred ceEEEEEEccccHHHHHHHHHHHhCCCccCCCCeEEEeccEEEEEcCC----CceEeeCCccCCCC------cEEEEEec
Confidence 999999999863 233332 112 234888999999999885 79999999999875 79999996
Q ss_pred CCeeeEEeCCCCC
Q 010042 454 LRQVNMLATPCCR 466 (519)
Q Consensus 454 ~~~~~mL~~~~~~ 466 (519)
++++||++..+.
T Consensus 288 -~al~vl~p~~~~ 299 (301)
T COG1597 288 -GALRVLVPPDRP 299 (301)
T ss_pred -ccEEEEcCCCCC
Confidence 599999998764
No 14
>PRK12361 hypothetical protein; Provisional
Probab=100.00 E-value=7.5e-37 Score=336.39 Aligned_cols=286 Identities=19% Similarity=0.220 Sum_probs=208.6
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 144 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~-~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDG 144 (519)
.++++||+||+||++++.+.++.+++.|.+.--+.+.. ..++++.+ +.+++. .++...|||+||||
T Consensus 242 ~~~~~iI~NP~SG~g~~~~~~~~i~~~L~~~~~~~v~~t~~~~~a~~-la~~~~------------~~~~d~Viv~GGDG 308 (547)
T PRK12361 242 HKRAWLIANPVSGGGKWQEYGEQIQRELKAYFDLTVKLTTPEISAEA-LAKQAR------------KAGADIVIACGGDG 308 (547)
T ss_pred CCceEEEECCCCCCCcHHHHHHHHHHHHhcCCceEEEECCCCccHHH-HHHHHH------------hcCCCEEEEECCCc
Confidence 47899999999999999999999999887631122222 23344432 332221 02335799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhcc-CCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCC
Q 010042 145 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSF-GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 223 (519)
Q Consensus 145 TV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~L-Gwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g 223 (519)
|||+|++++.+ .+++||+||+||||||||+| ||+.. . .+++++++.+.++.++++|++.++-
T Consensus 309 Tl~ev~~~l~~----~~~~lgiiP~GTgNdfAr~L~gi~~~--~---~~~~~a~~~i~~g~~~~iD~g~vn~-------- 371 (547)
T PRK12361 309 TVTEVASELVN----TDITLGIIPLGTANALSHALFGLGSK--L---IPVEQACDNIIQGHTQRIDTARCND-------- 371 (547)
T ss_pred HHHHHHHHHhc----CCCCEEEecCCchhHHHHHhcCCCCC--C---ccHHHHHHHHHhCCCeEEEEEEEcC--------
Confidence 99999999975 46899999999999999999 99841 0 2578889999999999999998741
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHH
Q 010042 224 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 303 (519)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 303 (519)
++|+|++|+|+||+|+...++.++ +..++++|...++
T Consensus 372 -----------------------------------~~fln~agiG~da~v~~~~~~~~k--------~~~G~laY~~~~~ 408 (547)
T PRK12361 372 -----------------------------------RLMLLLVGIGFEQKMIESADRERK--------NALGQLAYLDGLW 408 (547)
T ss_pred -----------------------------------eEEEEEEeechhHHHHHhccHHHH--------hccCHHHHHHHHH
Confidence 279999999999999998876554 3458999999999
Q ss_pred HhhhhcccccCCCCCCCcceEEEEEEecCCc-EEEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCC
Q 010042 304 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQ-WEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 382 (519)
Q Consensus 304 k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~-~~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdD 382 (519)
+. +.+ ++.+ .++|++ ||+ .+.. +..+++++|...|++.... +.+ .+++||
T Consensus 409 ~~------l~~--~~~~--~l~i~~---dg~~~~~~----~~~~l~v~N~~~~~~~~~~-Ggg-----------~~~~~D 459 (547)
T PRK12361 409 RA------VNE--NETL--TLTVTL---DDAEPQTI----STHSLVVANAAPFTSLLAQ-GGG-----------EPNMTD 459 (547)
T ss_pred HH------hhc--CCCe--eEEEEE---CCCCceEE----EEEEEEEEcCCCccccccc-CCC-----------CCCCCC
Confidence 87 442 2332 466777 443 2222 5677889998665321100 000 246899
Q ss_pred CcEEEEEecchh----HHHHH----Hhc-----CCCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEE
Q 010042 383 GLLEIVGFRDAW----HGLVL----LAP-----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVV 449 (519)
Q Consensus 383 G~LEVv~~~~~~----~~~~l----~~~-----~~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i 449 (519)
|+|||++++... +++.+ +.+ ..+.+++.++++++|+..+ ++++|+|||+.... |++|
T Consensus 460 G~Ldv~~v~~~~~~~~~l~~l~~~~~~g~~~~~~~~~v~~~~~k~v~I~~~~----~~~~~iDGE~~~~~------p~~i 529 (547)
T PRK12361 460 GLLDITWLDSGGEPGEQLLSLAELALSGLGKEPEANKVHHAHAKKVTISSQK----PIKYVIDGELFEDE------DLTI 529 (547)
T ss_pred ceeEEEEEcCCCcchHHHHHHHHHHHHHhcccCCCCceEEEEeeEEEEEeCC----ceEEEECCccCCce------EEEE
Confidence 999999998742 32222 111 2346888999999999875 79999999999863 8999
Q ss_pred EEEeCCeeeEEeCCC
Q 010042 450 EISHLRQVNMLATPC 464 (519)
Q Consensus 450 ~I~~~~~~~mL~~~~ 464 (519)
+|.+ ++++++++..
T Consensus 530 ~v~p-~al~vlvp~~ 543 (547)
T PRK12361 530 EVQP-ASLKVFVPYQ 543 (547)
T ss_pred EEec-CceEEEecCc
Confidence 9997 5999999653
No 15
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=100.00 E-value=3.5e-36 Score=325.37 Aligned_cols=296 Identities=15% Similarity=0.168 Sum_probs=205.1
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHH-HHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 010042 64 IPSCPVLVFINSKSGGQLGGKLLL-TYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 140 (519)
Q Consensus 64 ~~~~~vlvivNPkSG~~~g~~~l~-~~~~~L~~~qV-~dl~-~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~ 140 (519)
.-+++++||+||.||++++.+++. .++.+|....+ +++. .+.++++.+ +.+.+. ......|||+
T Consensus 109 ~~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~v~~T~~~ghA~~-la~~~~------------~~~~D~VV~v 175 (481)
T PLN02958 109 GRPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLTIQETKYQLHAKE-VVRTMD------------LSKYDGIVCV 175 (481)
T ss_pred cCCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEEEEeccCccHHHH-HHHHhh------------hcCCCEEEEE
Confidence 346889999999999999888764 68878865443 3332 246677654 333221 1234579999
Q ss_pred cCchHHHHHHHHHhcCCC---CCCCCEEEeeCCCCcchhhcc----CCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEE
Q 010042 141 GGDGTASWLLGVVSDLKL---PHSPPVATVPLGTGNNIPFSF----GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 213 (519)
Q Consensus 141 GGDGTV~~Vln~l~~~~~---~~~~plgiIPlGTGNDlAR~L----Gwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V 213 (519)
|||||||+|+|+|....- ..++|||+||+||||||||+| |++. ++.++++.|..+..+++|+++|
T Consensus 176 GGDGTlnEVvNGL~~~~~~~~~~~~pLGiIPaGTgNdfArsL~~~~gip~--------~~~~A~~~I~~g~~~~vDlg~v 247 (481)
T PLN02958 176 SGDGILVEVVNGLLEREDWKTAIKLPIGMVPAGTGNGMAKSLLDSVGEPC--------SATNAVLAIIRGHKCSLDVATI 247 (481)
T ss_pred cCCCHHHHHHHHHhhCccccccccCceEEecCcCcchhhhhhccccCCCc--------CHHHHHHHHHcCCceEEeEEEE
Confidence 999999999999975310 136899999999999999999 8875 5788888999999999999988
Q ss_pred eeeecCCCCCCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhccc
Q 010042 214 LMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLV 293 (519)
Q Consensus 214 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~ 293 (519)
+-. + .. .+|+|.+|+||||+|....+ + .|+.
T Consensus 248 ~~~-----------------------------------~--~~--~f~vn~~g~GfdAdV~~~se--~--------kr~l 278 (481)
T PLN02958 248 LQG-----------------------------------E--TK--FFSVLMLAWGLVADIDIESE--K--------YRWM 278 (481)
T ss_pred EcC-----------------------------------C--ce--EEEEEeeeeehhhhhhcccc--c--------cccc
Confidence 510 0 01 14589999999999965432 2 3456
Q ss_pred chHHHHHHHHHhhhhcccccCCCCCCCcceEEEEEE---------------ec-C----------------------CcE
Q 010042 294 NQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIM---------------KK-Q----------------------GQW 335 (519)
Q Consensus 294 nkl~Y~~~g~k~~~f~~~l~~~~~k~~~~~i~l~v~---------------~~-d----------------------G~~ 335 (519)
++++|...+++. +++ .+.+. .+|++. .. + .+|
T Consensus 279 G~lrY~~~~l~~------l~~--~r~y~--~~I~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 348 (481)
T PLN02958 279 GSARLDFYGLQR------ILC--LRQYN--GRISFVPAPGFEAYGEPTSYNGESTSKEESGKDKQHGYQGPDVKLENLDW 348 (481)
T ss_pred chHHHHHHHHHH------HHh--cCCcc--eEEEEEeccccccccccccccccccccccccccccccccCCccccCCccc
Confidence 899999999998 332 22221 333321 00 0 012
Q ss_pred EEEEeccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCcEEEEEecchhH--HHHHH--hc-----CCCc
Q 010042 336 EELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWH--GLVLL--AP-----NGHG 406 (519)
Q Consensus 336 ~~i~lp~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LEVv~~~~~~~--~~~l~--~~-----~~~~ 406 (519)
+.++. ...+++++|.+++|||+.+.| .|.++||+|||+++++... ++.++ +. ..+.
T Consensus 349 ~~~~~--~fl~v~v~N~~~~Ggg~~iaP-------------~A~l~DG~LDlviv~~~s~~~lL~~l~~~~~G~h~~~~~ 413 (481)
T PLN02958 349 RTIKG--PFVSVWLHNVPWGGEDTLAAP-------------DAKFSDGYLDLILIKDCPKLALLALMTKLSDGTHVKSPY 413 (481)
T ss_pred eEeec--ceeEEeeccCcccCCCcccCC-------------cccCCCCeEEEEEEcCCCHHHHHHHHHHHhCCCccCCCc
Confidence 22211 123355899999999999987 4899999999999998753 22222 11 2245
Q ss_pred cEEEeecEEEEEEccCC---CcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeeeEEe
Q 010042 407 TRLAQANRVRFEFEKGA---ADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLA 461 (519)
Q Consensus 407 vrl~Q~~~v~i~~~~~~---~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~mL~ 461 (519)
+++.++++++|+..... .++.++|+|||..... |++|++.++ ++.++-
T Consensus 414 V~~~k~k~~~I~~~~~~~~~~~~~~i~iDGE~~~~~------p~~i~v~~~-al~~~~ 464 (481)
T PLN02958 414 VMYLKVKAFVLEPGPRTDDPTKGGIIDSDGEVLARG------NGSYKCDQK-ALMSYD 464 (481)
T ss_pred eEEEEEEEEEEEECCcccCcCcCCeEEECCcccCCC------Cceeeeccc-cccccC
Confidence 88899999999874210 1246899999998764 789999864 666663
No 16
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The DAG kinase domain is assumed to be an accessory domain. Upon cell stimulation, DAG kinase converts DAG into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity. It catalyses the reaction: ATP + 1,2-diacylglycerol = ADP + 1,2-diacylglycerol 3-phosphate. The enzyme is stimulated by calcium and phosphatidylserine and phosphorylated by protein kinase C. This domain is always associated with IPR001206 from INTERPRO.; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway
Probab=100.00 E-value=7.3e-37 Score=286.17 Aligned_cols=160 Identities=35% Similarity=0.637 Sum_probs=140.5
Q ss_pred eeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHHhhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEe
Q 010042 261 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 340 (519)
Q Consensus 261 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~l 340 (519)
|+||||||+||+|+++||+.|+++|++|++|+.||++|+..|+++. +.+.++++.+.+++++ ||+ .+++
T Consensus 2 ~~NYfsiG~DA~ia~~Fh~~R~~~P~~f~sr~~NK~~Y~~~g~k~~------~~~~~~~~~~~i~l~~---dg~--~~~l 70 (161)
T PF00609_consen 2 MNNYFSIGVDAQIALGFHHSREKNPEKFNSRLLNKLWYAFFGFKAL------FQRSCKNLPKKIELEV---DGK--EVDL 70 (161)
T ss_pred eEecccccHhhHHHHHHhhccccChhhhccHHHHHHHHHHHHHHHH------HhchhcCchhhccccc---CCe--eEee
Confidence 8999999999999999999999999999999999999999999994 3345677766777777 676 7888
Q ss_pred ccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCcEEEEEecchhHHHHHHhcCCCccEEEeecEEEEEEc
Q 010042 341 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFE 420 (519)
Q Consensus 341 p~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LEVv~~~~~~~~~~l~~~~~~~vrl~Q~~~v~i~~~ 420 (519)
|.++.+|+++|+|||+||.++|+.+...... ..+.+++++||+|||+++++++|++.++++.++++|++|++.|+|+++
T Consensus 71 p~~~~~iv~lNIpSy~gG~~~W~~~~~~~~~-~~~~~~~~~Dg~lEVvg~~~~~hl~~~~~g~~~~~rl~Q~~~i~i~~~ 149 (161)
T PF00609_consen 71 PSSLESIVFLNIPSYGGGVDLWGNSKPDRSK-LKFKKQSMDDGKLEVVGFRGSFHLGQIQAGLSSAKRLAQGRPIRIETK 149 (161)
T ss_pred ecceeEEEEEccccccCCcccccCCcccccc-cccccccccCceEEEEEEcCchhhhhhhhccCCceEeecCCEEEEEEC
Confidence 8789999999999999999999875332111 357789999999999999999999998888889999999999999998
Q ss_pred cCCCcceeeeecCCc
Q 010042 421 KGAADHTFMRIDGEP 435 (519)
Q Consensus 421 ~~~~~~~~~qiDGE~ 435 (519)
++ ++||||||||
T Consensus 150 ~~---~~~~QvDGEp 161 (161)
T PF00609_consen 150 EN---KVPFQVDGEP 161 (161)
T ss_pred CC---ceeEEeCCCC
Confidence 61 6999999997
No 17
>PLN02204 diacylglycerol kinase
Probab=100.00 E-value=4.6e-31 Score=286.37 Aligned_cols=318 Identities=16% Similarity=0.154 Sum_probs=206.2
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 64 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 64 ~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl-~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
..+++++|||||.||++.+.+.|..+..+|....+ +++ ..+.++++.+ +.+.+..+ +......|||+|
T Consensus 157 ~r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v~~T~~aghA~d-~~~~~~~~---------~l~~~D~VVaVG 226 (601)
T PLN02204 157 GRPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKVIVTERAGHAFD-VMASISNK---------ELKSYDGVIAVG 226 (601)
T ss_pred CCCceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHHhhh---------hccCCCEEEEEc
Confidence 44588999999999999999999999998876543 332 2246677654 33322110 012345799999
Q ss_pred CchHHHHHHHHHhcCCC---------------------------------------------------------------
Q 010042 142 GDGTASWLLGVVSDLKL--------------------------------------------------------------- 158 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~~--------------------------------------------------------------- 158 (519)
||||+|+|+|+|...+.
T Consensus 227 GDGt~nEVlNGL~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (601)
T PLN02204 227 GDGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVHEPNETVHECDNEDHSPLLSDSVQEVMNFRTENGSCEGDQ 306 (601)
T ss_pred CccHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999963110
Q ss_pred -------CCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCCCCCCCC
Q 010042 159 -------PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPL 231 (519)
Q Consensus 159 -------~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~~~~~~~ 231 (519)
...++|||||+||||||++.++.+. ++..++..|..|+.+.+|+++|+-.... .
T Consensus 307 ~~~~~~~~~~~~lGIIPaGSgN~~a~~~~g~~--------dp~taa~~Ii~G~~~~lDig~V~~~~~~----~------- 367 (601)
T PLN02204 307 DSDFPFPNERFRFGIIPAGSTDAIVMCTTGER--------DPVTSALHIILGRRVCLDIAQVVRWKTT----S------- 367 (601)
T ss_pred cccccccCCCceEEEECCccHHHHHHHccCCC--------CHHHHHHHHHhCCCeEeeEEEEeccccc----c-------
Confidence 1357899999999999999887664 5777888899999999999998621100 0
Q ss_pred CCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHHhhhhccc
Q 010042 232 ELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAP 311 (519)
Q Consensus 232 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~ 311 (519)
.+ + ...+.+||.|.+|+||||+|+...++ .|++|+++|.+.+++.
T Consensus 368 -----------------~~-~-~~~~~ryf~s~ag~Gf~gdVi~esek----------~R~mG~~rY~~~g~k~------ 412 (601)
T PLN02204 368 -----------------TS-E-IEPYVRYAASFAGYGFYGDVISESEK----------YRWMGPKRYDYAGTKV------ 412 (601)
T ss_pred -----------------cc-c-ccccceEEEEEeecchHHHHHHHhhh----------hcccchHHHHHHHHHH------
Confidence 00 0 00112589999999999999977543 3456899999999998
Q ss_pred ccCCCCCCCcceEEEEEEecCCcEEEE-E---------eccc---e---eEEEEEcCC---------------------C
Q 010042 312 LLHPSSRNIAQMAKVKIMKKQGQWEEL-H---------IPRY---I---RSIVCLNLP---------------------S 354 (519)
Q Consensus 312 l~~~~~k~~~~~i~l~v~~~dG~~~~i-~---------lp~~---~---~~ivvlN~~---------------------s 354 (519)
++. .+.+ .++|.+ ++..... . .+.. + ..+.++|.+ +
T Consensus 413 ~~~--~r~y--~~~V~~---d~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~c~Vcn~~~~~~~~~~~p~~~~~~~~W~~~ 485 (601)
T PLN02204 413 FLK--HRSY--EAEVAY---LETESEKSKASSEARKRTGPKKSEKIVCRTNCSVCNTKVSTNSPSTTPNSCPEETRWLRS 485 (601)
T ss_pred HHh--CCCc--eEEEEE---CCeEeeecccccccccccccccccchhhhhheeeecccccccccccccccccccccceee
Confidence 432 2333 356666 3331110 0 0000 0 125566754 1
Q ss_pred Cc----CCccCCCCcccccccccCCCCCccCCCcEEEEEecchhH--HHHH---HhcC------CCccEEEeecEEEEEE
Q 010042 355 FS----GGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWH--GLVL---LAPN------GHGTRLAQANRVRFEF 419 (519)
Q Consensus 355 ~g----GG~~~w~~~~~~~~~~~~~~~a~vdDG~LEVv~~~~~~~--~~~l---~~~~------~~~vrl~Q~~~v~i~~ 419 (519)
+| +|..+....+.+ ..+.-...|.++||.|+|+.+++..+ ++.+ +... .+.+++.+++.|+|+.
T Consensus 486 ~G~f~~vG~~iis~~~~r-ap~gl~pdA~l~DG~LDLilVr~~s~~~~L~~L~~l~~~gG~~l~~~~Ve~~ktk~f~~~s 564 (601)
T PLN02204 486 KGRFLSVGAAIISNRNER-APDGLVADAHLSDGFLHLILIKDCPHPLYLWHLTQLAKRGGEPLNFEFVEHHKTPAFTFTS 564 (601)
T ss_pred cCceEEeeeecccccccc-cccccCCCCcCCCCeEEEEEECCCCHHHHHHHHHHHHhhcCccCCCCcEEEEEeeEEEEEE
Confidence 22 221111100000 00001125899999999999998754 2221 1211 1347889999999987
Q ss_pred ccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeeeEEeCC
Q 010042 420 EKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATP 463 (519)
Q Consensus 420 ~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~mL~~~ 463 (519)
.. .+.++++|||..... |+.++|.+ +.++++++-
T Consensus 565 ~~---~~~~~niDGE~~~~~------~v~v~V~~-~al~lfa~g 598 (601)
T PLN02204 565 FG---DESVWNLDGEIFQAH------QLSAQVFR-GLVNLFASG 598 (601)
T ss_pred CC---CCceEEeCCCcCCCc------cEEEEEEc-CeeEEEecC
Confidence 53 146799999998764 79999985 699999854
No 18
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain might either be an accessory domain or else contribute to the catalytic domain. Bacterial homologues are known.
Probab=99.90 E-value=6.4e-24 Score=198.40 Aligned_cols=159 Identities=32% Similarity=0.637 Sum_probs=121.7
Q ss_pred eeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHHHHHHHHhhhhcccccCCCCCCCcceEEEEEEecCCcEEEEEe
Q 010042 261 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 340 (519)
Q Consensus 261 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~~~~~i~l~v~~~dG~~~~i~l 340 (519)
|+||+||||||.|++.++..|+++|.+|++++.|+++|+..+++. ++...++++...++|++ ||+ ....
T Consensus 2 ~~N~~giGfDA~V~~~~~~~r~~~~~~~~~~~~g~l~Y~~~~l~~------l~~~~~~~~~~~~~i~~---dg~--~~~~ 70 (160)
T smart00045 2 MNNYFSIGVDAHIALEFHNKREANPEKFNSRLKNKMWYFELGTKD------LFFRTCKDLHERIELEC---DGV--DVDL 70 (160)
T ss_pred ccccccccHhHHHHHHHHHHhhcCchhhcccceeeeeeeecchHH------hhhccccchhhceEEEE---CCE--eccC
Confidence 899999999999999999999999998888888999999999998 32112333222467777 665 3444
Q ss_pred ccceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCcEEEEEecchhHHHHHHhcCCCccEEEeecEEEEEEc
Q 010042 341 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFE 420 (519)
Q Consensus 341 p~~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LEVv~~~~~~~~~~l~~~~~~~vrl~Q~~~v~i~~~ 420 (519)
+.++.+++++|++|||||+.+||.... ..+.+..++++||+|||+++++.+++..++....+.+++.|+++++|++.
T Consensus 71 ~~~~~~v~v~N~~~~ggG~~i~p~~~~---~~~~~p~a~~~DG~ldv~~~~~~~~~~~~~~~~~~~v~~~~~~~v~i~i~ 147 (160)
T smart00045 71 PNSLEGIAVLNIPSYGGGTNLWGTTDK---EDLNFSKQSHDDGLLEVVGLTGAMHMAQIRQVGLAGRRIAQCSEVRITIK 147 (160)
T ss_pred CCCccEEEEECCCccccCcccccCCcc---cccccCCCCCCCceEEEEEEcCchhhhhhhhccCCCceeecCceEEEEEe
Confidence 324788999999999999999975211 12345579999999999999998766544434456789999999985543
Q ss_pred cCCCcceeeeecCCc
Q 010042 421 KGAADHTFMRIDGEP 435 (519)
Q Consensus 421 ~~~~~~~~~qiDGE~ 435 (519)
. ++++++|+|||+
T Consensus 148 ~--~~~~~~q~DGE~ 160 (160)
T smart00045 148 T--SKTIPMQVDGEP 160 (160)
T ss_pred c--CCceeeecCCCC
Confidence 2 238999999995
No 19
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=99.87 E-value=6.1e-22 Score=178.44 Aligned_cols=122 Identities=25% Similarity=0.316 Sum_probs=80.1
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcc----CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccC-cEEEEEcC
Q 010042 68 PVLVFINSKSGGQLGGKLLLTYRSLLNE----NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKR-LRLIVAGG 142 (519)
Q Consensus 68 ~vlvivNPkSG~~~g~~~l~~~~~~L~~----~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~-~~VIV~GG 142 (519)
+++||+||+||++++. ++.+++.|.. .+++......+.++ +.+ ... .... ..||++||
T Consensus 1 k~~vi~Np~sG~~~~~--~~~v~~~l~~~~~~~~~~~t~~~~~~~~---~~~-~~~-----------~~~~~~~ivv~GG 63 (130)
T PF00781_consen 1 KVLVIINPKSGGGRAK--WKKVEPALRAAGIDYEVIETESAGHAEA---LAR-ILA-----------LDDYPDVIVVVGG 63 (130)
T ss_dssp SEEEEEETTSTTSHHH--HHHHHHHHHHTTCEEEEEEESSTTHHHH---HHH-HHH-----------HTTS-SEEEEEES
T ss_pred CEEEEECCCCCCCchh--HHHHHHHHHHcCCceEEEEEeccchHHH---HHH-HHh-----------hccCccEEEEEcC
Confidence 4799999999999998 3666655543 23443332222222 222 111 1233 68999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHH-HHHHHHcCCeeeEeEEEEe
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLS-FLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~-~l~~i~~a~~~~iD~w~V~ 214 (519)
||||++|++++........++||+||+||||||||+|||+. +... .+..+..+..+++|+.+|+
T Consensus 64 DGTl~~vv~~l~~~~~~~~~~l~iiP~GT~N~~ar~lg~~~--------~~~~~a~~~~~~~~~~~~d~~~v~ 128 (130)
T PF00781_consen 64 DGTLNEVVNGLMGSDREDKPPLGIIPAGTGNDFARSLGIPS--------DPEANAALLIILGRVRKIDVGKVN 128 (130)
T ss_dssp HHHHHHHHHHHCTSTSSS--EEEEEE-SSS-HHHHHTT--S--------SHHH-HHHHHHHSEEEEEEEEEET
T ss_pred ccHHHHHHHHHhhcCCCccceEEEecCCChhHHHHHcCCCC--------CcHHHHHHHHHhCCCcEeEEEEeC
Confidence 99999999999875433467999999999999999999996 2344 4555556666799998874
No 20
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=99.85 E-value=5.3e-21 Score=171.51 Aligned_cols=100 Identities=49% Similarity=0.867 Sum_probs=76.4
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHH
Q 010042 70 LVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWL 149 (519)
Q Consensus 70 lvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~V 149 (519)
+||+||+||++++..++..+++.+.+.+++........++.+ +.+. ......|+++|||||+|+|
T Consensus 1 lvi~NP~sG~~~~~~~~~~~~~~l~~~~v~~t~~~~~~~~~~-~~~~--------------~~~~d~vvv~GGDGTi~~v 65 (124)
T smart00046 1 LVFVNPKSGGGKGVKLLRKFRLLLNPAQVFDLTKKGPAAALV-IFRD--------------LPKFDRVLVCGGDGTVGWV 65 (124)
T ss_pred CEEEcCCCCCCccHHHHHHHHHHcCCceEEEEecCChHHHHH-HHhh--------------cCcCCEEEEEccccHHHHH
Confidence 589999999999999999999999887776655433333332 1111 1223489999999999999
Q ss_pred HHHHhcCCCC-CCCCEEEeeCCCCcchhhccCCCCC
Q 010042 150 LGVVSDLKLP-HSPPVATVPLGTGNNIPFSFGWGKK 184 (519)
Q Consensus 150 ln~l~~~~~~-~~~plgiIPlGTGNDlAR~LGwg~~ 184 (519)
++++.+.... +.+|||+||+||||||||+|||+.+
T Consensus 66 vn~l~~~~~~~~~~plgiiP~GTgNdfar~lgi~~~ 101 (124)
T smart00046 66 LNALDKRELPLPEPPVAVLPLGTGNDLARSLGWGGG 101 (124)
T ss_pred HHHHHhcccccCCCcEEEeCCCChhHHHHHcCCCCC
Confidence 9999764211 1289999999999999999999974
No 21
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.85 E-value=7.1e-20 Score=196.15 Aligned_cols=299 Identities=19% Similarity=0.226 Sum_probs=192.6
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHH-HHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 65 PSCPVLVFINSKSGGQLGGKLLLT-YRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 65 ~~~~vlvivNPkSG~~~g~~~l~~-~~~~L~~~qV-~dl~-~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
..+.++||+||.+|.+++.+++.+ ++-+|....+ |++. .++|.+|.+ +.+.+. .....-||++|
T Consensus 178 r~~~lLV~iNP~gGkGka~~~F~~~v~Pll~~A~i~~evv~T~~~~HAre-i~rt~d------------l~kyDgIv~vs 244 (579)
T KOG1116|consen 178 RPRRLLVFINPFGGKGKAKKLFKNHVEPLLSEAGISFEVVLTTRPNHARE-IVRTLD------------LGKYDGIVCVS 244 (579)
T ss_pred CCccEEEEECCCCCCccHHHHHHhhhhhhhhhcCceEEEEEecCccHHHH-HHHhhh------------ccccceEEEec
Confidence 357899999999999999887765 4556655544 5443 358898865 444431 12345699999
Q ss_pred CchHHHHHHHHHhcCC---CCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEeeeec
Q 010042 142 GDGTASWLLGVVSDLK---LPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMK 218 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~---~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~ 218 (519)
|||+++||+|+|..-. .....|||+||+||||.||.++.|..+. + -+..+.-.+..+....+|+..+....
T Consensus 245 GDGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~Sv~~~~~~---~--~~~~a~l~iirg~~t~~dv~~v~~~~- 318 (579)
T KOG1116|consen 245 GDGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKSVLWTNGP---D--LPLLATLLIIRGRLTPMDVSVVEYAG- 318 (579)
T ss_pred CCcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHHhhcccCc---c--cchHHHHHHHccCCCchheeehhhcc-
Confidence 9999999999997632 1257899999999999999999998621 1 12334445667888899998775210
Q ss_pred CCCCCCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchhhhhcccchHHH
Q 010042 219 APKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTY 298 (519)
Q Consensus 219 ~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y 298 (519)
.+ +.++.++..-|+-|+|-.+.++.|+ .|...|
T Consensus 319 ---------------------------------~~----~~fSfLs~~wGlIADiDI~SEk~R~----------mG~~Rf 351 (579)
T KOG1116|consen 319 ---------------------------------KD----RHFSFLSAAWGLIADVDIESEKYRW----------MGPARF 351 (579)
T ss_pred ---------------------------------Cc----ceEEEEeeeeeeEEecccchHHHHh----------hcchhh
Confidence 01 1267789999999999887776553 466666
Q ss_pred HHHHHHhhhhcccccCCCCCCCcceEEEEEEe---c--------------------------------------------
Q 010042 299 LKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMK---K-------------------------------------------- 331 (519)
Q Consensus 299 ~~~g~k~~~f~~~l~~~~~k~~~~~i~l~v~~---~-------------------------------------------- 331 (519)
.+.++.. ++| + ++|+. ++.+.. +
T Consensus 352 ~lg~~~r-l~~--l--r~Y~g-----ri~ylp~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~~~~~~ 421 (579)
T KOG1116|consen 352 TLGAFLR-LIQ--L--RKYKG-----RIEYLPAKGKSAEPLPAHELEAADSEGCLSTHADTEPSEYPRLSVPKMSPKSVL 421 (579)
T ss_pred hHHHHHH-HHh--c--cCCCc-----eEEEecccccccCcccchhhccccccccccccccccccccccccccccCccccc
Confidence 6666654 221 1 22211 111110 0
Q ss_pred --------------------------CCcEEEEEecc-ceeEEEEEcCCCCcCCccCCCCcccccccccCCCCCccCCCc
Q 010042 332 --------------------------QGQWEELHIPR-YIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGL 384 (519)
Q Consensus 332 --------------------------dG~~~~i~lp~-~~~~ivvlN~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~ 384 (519)
...|..+ ++ +...+...=.++.|+.+.+.| .+..+||.
T Consensus 422 ~s~~~e~s~~~~~~~~~~~p~~~~p~psdw~~~--~~~d~~~~~a~~~sy~~~d~~~~P-------------~A~~~dg~ 486 (579)
T KOG1116|consen 422 RSPVSETSPVIPEDPLHLSPPLEEPLPSDWEVV--PGVDFVCILAILLSYLGADMKFAP-------------AARPDDGL 486 (579)
T ss_pred cCcccccCcccCCccccCCCcccCCCCcceeee--cCcceeeeehhhhhhccCCccccc-------------ccccCCCe
Confidence 0112211 11 111111111236777777766 48899999
Q ss_pred EEEEEecchh---HHHHHHhcCC---------CccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEE
Q 010042 385 LEIVGFRDAW---HGLVLLAPNG---------HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 452 (519)
Q Consensus 385 LEVv~~~~~~---~~~~l~~~~~---------~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~ 452 (519)
+++++++.-. .++.++.... +.+.+..++.++++.... ...+++|||.+... |..+++.
T Consensus 487 I~lv~~~~~~~r~~ll~~llald~gsh~~~~~p~v~~~~vra~r~epv~~---~~~~~vDGE~~~~e------p~q~~v~ 557 (579)
T KOG1116|consen 487 IHLVIVRAGGSRTQLLRLLLALDKGSHLHVECPFVKYVKVRAFRLEPVTP---SGYFAVDGELVPLE------PLQVQVL 557 (579)
T ss_pred EEEEEEccCCcHHHHHHHHHhhcccccccccCCceeEEEeEEEEEEEecC---CceEEecccEeecc------ceeEEec
Confidence 9999998652 2333332222 234456777788776541 37899999999874 7999998
Q ss_pred eCCeeeEEeCCC
Q 010042 453 HLRQVNMLATPC 464 (519)
Q Consensus 453 ~~~~~~mL~~~~ 464 (519)
+ +-+.+|....
T Consensus 558 p-~~i~~~s~~~ 568 (579)
T KOG1116|consen 558 P-GLILTLSGRG 568 (579)
T ss_pred c-cceeEEeccC
Confidence 6 5888888754
No 22
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.49 E-value=5.3e-13 Score=137.38 Aligned_cols=295 Identities=16% Similarity=0.158 Sum_probs=178.4
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-E--EEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-I--DLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~--dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
++.++|||||.+|+++|.++++.+..++--..| + .++ +...+|.+-++ .+. ..+...-+=||++||
T Consensus 158 PknllvFinPfgGkG~g~ki~e~V~~~F~la~v~tkvivT-ErAnhA~d~~~-ei~---------~~~~~~yDGiv~VGG 226 (516)
T KOG1115|consen 158 PKNLLVFINPFGGKGNGSKIWETVSKIFILAKVNTKVIVT-ERANHAFDVMA-EIQ---------NKELHTYDGIVAVGG 226 (516)
T ss_pred CccEEEEEcCCCCCCcccchhhhhhhhEEeeecceeEEEE-ccccchhhhhh-hCC---------HhhhhhcccEEEecC
Confidence 478999999999999999999997776432222 2 233 34555543221 110 011122234999999
Q ss_pred chHHHHHHHHHhcC-------CC--------CCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeee
Q 010042 143 DGTASWLLGVVSDL-------KL--------PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQ 207 (519)
Q Consensus 143 DGTV~~Vln~l~~~-------~~--------~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~ 207 (519)
||-.||+|++..-. +. ...+-+||||.|+.|-..-+--=..+ .+.++|. |.-|....
T Consensus 227 DG~FnEiL~G~llrtQ~~ag~~i~~P~~~lv~~~~RfGiIpAGStd~iv~~t~gt~D-------~~TSAlH-I~lG~~l~ 298 (516)
T KOG1115|consen 227 DGFFNEILNGYLLRTQEVAGFRIEDPDHPLVSERPRFGIIPAGSTDAIVMCTTGTRD-------PVTSALH-IILGRKLF 298 (516)
T ss_pred chhHHHHHhhhhhhhhhhcCcccCCCCCcccCCCceeeeecCCCcCeEEEEeccCCc-------cccceee-eEecccee
Confidence 99999999987521 11 23567999999999987766543321 2333443 44577888
Q ss_pred EeEEEEeeeecCCCCCCCCCCCCCCCCcccccccccccccccccCCccccccceeeeeccChhHHHHHHHHhhhccCchh
Q 010042 208 IDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEK 287 (519)
Q Consensus 208 iD~w~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~ 287 (519)
+|+.+|.-. . .+=||-.|.+|.||-++|....++.|
T Consensus 299 vDVctVht~------------------------------~--------kLiRysaSa~gYGFyGDvl~dSEKYR------ 334 (516)
T KOG1115|consen 299 VDVCTVHTI------------------------------E--------KLIRYSASAAGYGFYGDVLSDSEKYR------ 334 (516)
T ss_pred eeeeeeeec------------------------------c--------hheeeehhhhcccccchhhhhhhhhh------
Confidence 999887510 0 01135678899999999998877655
Q ss_pred hhhcccchHHHHHHHHHhhhhcccccCCCCCCCcceEEE-----------------EEEecCCcEEEEEeccceeEEEEE
Q 010042 288 FQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKV-----------------KIMKKQGQWEELHIPRYIRSIVCL 350 (519)
Q Consensus 288 f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~~~~~i~l-----------------~v~~~dG~~~~i~lp~~~~~ivvl 350 (519)
+.+...|-+.|+|.. +.|+.++.- +.+ +.-..+.+|+.++ +.-..|.|+
T Consensus 335 ----WmGp~RYDfsglKtf-----lkH~~Yege---VsFlpa~sen~~qe~~~~g~~~~~~~k~Wq~~~--g~Fl~V~c~ 400 (516)
T KOG1115|consen 335 ----WMGPKRYDFSGLKTF-----LKHRSYEGE---VSFLPAESENPCQEPCPSGASLHTRSKTWQRNT--GRFLKVLCR 400 (516)
T ss_pred ----ccCchhhhhHHHHHH-----HhccccceE---EEecccccCCchhccccccCCcccCcchhhhhh--hheeeeeEe
Confidence 456778999999982 223322210 111 0000023344332 244567777
Q ss_pred cCCCCcCCccCCCCcccccccccCCCCCccCCCcEEEEEecchhHH--HHHHh---c-----CCCccEEEeecEEEEEEc
Q 010042 351 NLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHG--LVLLA---P-----NGHGTRLAQANRVRFEFE 420 (519)
Q Consensus 351 N~~s~gGG~~~w~~~~~~~~~~~~~~~a~vdDG~LEVv~~~~~~~~--~~l~~---~-----~~~~vrl~Q~~~v~i~~~ 420 (519)
|+|...---.-|-.| ...++||-++++.++..+.. ++.+. . ...-+....+.+|.....
T Consensus 401 aipciC~~~PrGLaP-----------~T~LndGs~dLil~R~~SRF~fi~fl~r~a~~~~qfdf~fVe~y~v~~v~~~s~ 469 (516)
T KOG1115|consen 401 AIPCICNSKPRGLAP-----------STTLNDGSEDLILCRTKSRFLFIGFLVRSARNERQFDFLFVEAYLVDGVLHLSL 469 (516)
T ss_pred eccccccCCCCCcCC-----------ccccCCCccceeeeecccchHHHHHHHHHhhcccccCceeeeeeeeeeEEEEee
Confidence 777644221111111 36899999999999987543 33221 1 112245556666666554
Q ss_pred cC---CCcceeeeecCCcCCCCCCCCCCcEEEEEEe
Q 010042 421 KG---AADHTFMRIDGEPWKQPLPVDEDTVVVEISH 453 (519)
Q Consensus 421 ~~---~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~ 453 (519)
.. -.++....+|||...++ .|+.|++.+
T Consensus 470 ~~d~~~~d~~eWN~DGeile~p-----~~lh~rlHp 500 (516)
T KOG1115|consen 470 IKDCSRPDYLEWNLDGEILEQP-----KPLHFRLHP 500 (516)
T ss_pred cCCCCCCCcceeccCcchhcCC-----cceEEEech
Confidence 21 13345689999999997 378888764
No 23
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.66 E-value=1.3e-07 Score=97.88 Aligned_cols=134 Identities=18% Similarity=0.077 Sum_probs=78.1
Q ss_pred CCCCCeEEEEEcCCCCCCChhhHHHH-HHHHhc--cCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEE
Q 010042 63 LIPSCPVLVFINSKSGGQLGGKLLLT-YRSLLN--ENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIV 139 (519)
Q Consensus 63 ~~~~~~vlvivNPkSG~~~g~~~l~~-~~~~L~--~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV 139 (519)
.+.+++++|++||.+-.+.......+ ...+|+ ..||-.+.....+++ .+-++.+ + ...+.|+|
T Consensus 57 ~~~~Kkv~V~~Np~ank~~~r~~f~kna~P~lHLaG~~V~Ivktd~~gqa----k~l~e~~-------~---t~~Dii~V 122 (535)
T KOG4435|consen 57 ETRPKKVFVLVNPEANKRGCRDQFNKNALPLLHLAGVQVDIVKTDNQGQA----KALAEAV-------D---TQEDIIYV 122 (535)
T ss_pred ccccceEEEEechhhccchhhhhhhcccchheeeccceEEEEecCcHHHH----HHHHHHh-------c---cCCCeEEE
Confidence 34468999999999866544333322 223333 334422222223322 1111111 0 12378999
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCe---eeEeEE
Q 010042 140 AGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE---MQIDSW 211 (519)
Q Consensus 140 ~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~---~~iD~w 211 (519)
+|||||+++|+.++...+ ....||+++|+|--|-...+.-..-...+++...+.+++..+.+++. ..+|+-
T Consensus 123 aGGDGT~~eVVTGi~Rrr-~~~~pv~~~P~G~~~l~~~s~l~~vfe~~d~V~h~~~a~~avikde~ksv~~fdv~ 196 (535)
T KOG4435|consen 123 AGGDGTIGEVVTGIFRRR-KAQLPVGFYPGGYDNLWLKSMLPSVFENSDDVRHACEAAMAVIKDEKKSVYAFDVT 196 (535)
T ss_pred ecCCCcHHHhhHHHHhcc-cccCceeeccCccchHhhhhhchhhhccchHHHHHHHHHHHHhcccccceEEEEec
Confidence 999999999999998753 46789999999988765544332221223444455555666666655 566653
No 24
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.98 E-value=3.9e-05 Score=78.22 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=70.7
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhh-hh--ccCcEEEEEcCc
Q 010042 68 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFAS-EI--EKRLRLIVAGGD 143 (519)
Q Consensus 68 ~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~-~~--~~~~~VIV~GGD 143 (519)
++.||+|+. ...+..+++++.+.|....+ +.+....... . ..+. ..+. .. .+...||++|||
T Consensus 2 ~v~iv~~~~--k~~~~~~~~~I~~~L~~~g~~v~v~~~~~~~-~----~~~~-------~~~~~~~~~~~~d~vi~iGGD 67 (277)
T PRK03708 2 RFGIVARRD--KEEALKLAYRVYDFLKVSGYEVVVDSETYEH-L----PEFS-------EEDVLPLEEMDVDFIIAIGGD 67 (277)
T ss_pred EEEEEecCC--CHHHHHHHHHHHHHHHHCCCEEEEecchhhh-c----Cccc-------ccccccccccCCCEEEEEeCc
Confidence 477888864 46777888888887765432 2222100000 0 0000 0000 01 134579999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCee
Q 010042 144 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 206 (519)
Q Consensus 144 GTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~ 206 (519)
||+.++++ +.. ..+||..||+||. +|...+.. +++..+++.+.++...
T Consensus 68 GTlL~a~~-~~~----~~~pi~gIn~G~l-GFl~~~~~---------~~~~~~l~~i~~g~~~ 115 (277)
T PRK03708 68 GTILRIEH-KTK----KDIPILGINMGTL-GFLTEVEP---------EETFFALSRLLEGDYF 115 (277)
T ss_pred HHHHHHHH-hcC----CCCeEEEEeCCCC-CccccCCH---------HHHHHHHHHHHcCCce
Confidence 99999999 644 4788999999999 88887762 2688899999988643
No 25
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.97 E-value=5.7e-05 Score=78.11 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=72.7
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 65 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 65 ~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q--V~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
..+++++|+|| |......++..+.+.|.... ++................. .......||++||
T Consensus 2 ~~kkv~lI~n~--~~~~~~~~~~~i~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-------------~~~~~d~vi~~GG 66 (305)
T PRK02645 2 QLKQVIIAYKA--GSSQAKEAAERCAKQLEARGCKVLMGPSGPKDNPYPVFLAS-------------ASELIDLAIVLGG 66 (305)
T ss_pred CcCEEEEEEeC--CCHHHHHHHHHHHHHHHHCCCEEEEecCchhhccccchhhc-------------cccCcCEEEEECC
Confidence 35789999998 54566677778777775432 2211111111011000000 0112357999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC-CCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEee
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 215 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPl-GTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~ 215 (519)
|||+..+++.+.. ..+||..|.+ |+-.=|+..-... .. .++++.+.+++..--.+..+..
T Consensus 67 DGT~l~~~~~~~~----~~~pv~gin~~G~lGFL~~~~~~~--------~~-~~~l~~i~~g~~~i~~r~~L~~ 127 (305)
T PRK02645 67 DGTVLAAARHLAP----HDIPILSVNVGGHLGFLTHPRDLL--------QD-ESVWDRLQEDRYAIERRMMLQA 127 (305)
T ss_pred cHHHHHHHHHhcc----CCCCEEEEecCCcceEecCchhhc--------ch-HHHHHHHHcCCceEEEeeEEEE
Confidence 9999999998864 4688888898 6644444221101 12 6789999999865555555543
No 26
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.57 E-value=0.00057 Score=70.31 Aligned_cols=123 Identities=15% Similarity=0.150 Sum_probs=74.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEcCc
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAGGD 143 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~-~~~~~VIV~GGD 143 (519)
.+.+.+|.|+.. .....++..+.+.|....+ +.+.. .....+. .. .. .. . .+ .+. .+...||++|||
T Consensus 5 ~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~g~~v~~~~-~~~~~~~-~~-~~---~~-~-~~-~~~~~~~d~vi~lGGD 73 (292)
T PRK03378 5 FKCIGIVGHPRH--PTALTTHEMLYHWLTSKGYEVIVEQ-QIAHELQ-LK-NV---KT-G-TL-AEIGQQADLAIVVGGD 73 (292)
T ss_pred CCEEEEEEeCCC--HHHHHHHHHHHHHHHHCCCEEEEec-chhhhcC-cc-cc---cc-c-ch-hhcCCCCCEEEEECCc
Confidence 467999999755 5667788888887765432 11221 1100000 00 00 00 0 00 011 123579999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCc-chhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEe
Q 010042 144 GTASWLLGVVSDLKLPHSPPVATVPLGTGN-NIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 144 GTV~~Vln~l~~~~~~~~~plgiIPlGTGN-DlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 214 (519)
||+..++..+... .+.+||.++|| .|...+.. .++.++|+.+.++....-.+..+.
T Consensus 74 GT~L~aa~~~~~~------~~Pilgin~G~lGFl~~~~~---------~~~~~~l~~i~~g~~~i~~r~~L~ 130 (292)
T PRK03378 74 GNMLGAARVLARY------DIKVIGINRGNLGFLTDLDP---------DNALQQLSDVLEGHYISEKRFLLE 130 (292)
T ss_pred HHHHHHHHHhcCC------CCeEEEEECCCCCcccccCH---------HHHHHHHHHHHcCCceEEEEEEEE
Confidence 9999999877541 24578888888 77666552 368889999999876544555444
No 27
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.49 E-value=0.042 Score=55.55 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=37.0
Q ss_pred CCccEEEeecEEEEEEccCCCcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeeeEEeC
Q 010042 404 GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLAT 462 (519)
Q Consensus 404 ~~~vrl~Q~~~v~i~~~~~~~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~mL~~ 462 (519)
+.++.+-+.++|+|++.+ +..+++|||..... .+++|++.+ ..++++.+
T Consensus 188 ~rpiVlp~~~~I~I~~~~----~~~l~iDGe~~~~~-----~~I~I~~s~-~~l~li~~ 236 (256)
T PRK14075 188 TRSIVIPSNEKVTVESQR----DINLIVDGVLVGKT-----NRITVKKSR-RYVRILRP 236 (256)
T ss_pred CCceEcCCCCEEEEEECC----ceEEEECCCCcCCC-----cEEEEEECC-CEEEEEEc
Confidence 344455578889998865 68899999986542 478899886 59999984
No 28
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.10 E-value=0.0057 Score=63.08 Aligned_cols=120 Identities=19% Similarity=0.197 Sum_probs=68.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeec-C---chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEK-A---PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~-~---p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
+.+.||+|+.+ ..+..+++.+.+.|....+ +.+... . +.++.. ....+ .+ ......||++|
T Consensus 5 ~~v~iv~~~~k--~~a~e~~~~i~~~L~~~giev~v~~~~~~~~~~~~~~--~~~~~-------~~---~~~~d~vi~~G 70 (295)
T PRK01231 5 RNIGLIGRLGS--SSVVETLRRLKDFLLDRGLEVILDEETAEVLPGHGLQ--TVSRK-------LL---GEVCDLVIVVG 70 (295)
T ss_pred CEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecchhhhcCccccc--ccchh-------hc---ccCCCEEEEEe
Confidence 46999999776 4666777788777754322 112110 0 100000 00000 00 11245799999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEe
Q 010042 142 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 214 (519)
||||+..++..+.. ..+||--|.+|+ ||+-.. .+.+++.++|+.+.++...--.+..+.
T Consensus 71 GDGt~l~~~~~~~~----~~~Pvlgin~G~-------lGFl~~---~~~~~~~~~l~~~~~g~~~i~~r~~L~ 129 (295)
T PRK01231 71 GDGSLLGAARALAR----HNVPVLGINRGR-------LGFLTD---IRPDELEFKLAEVLDGHYQEEERFLLE 129 (295)
T ss_pred CcHHHHHHHHHhcC----CCCCEEEEeCCc-------cccccc---CCHHHHHHHHHHHHcCCceEEEEEEEE
Confidence 99999999988753 356655566664 343321 123478889999999876544555544
No 29
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=97.04 E-value=0.0057 Score=63.49 Aligned_cols=55 Identities=27% Similarity=0.396 Sum_probs=40.7
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh-hccCCCCCCCCCchHHHHHHHHHHHcC
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP-FSFGWGKKNPNTDQQAVLSFLEQVKNA 203 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlA-R~LGwg~~~~~~~~~~~~~~l~~i~~a 203 (519)
..|+.+|||||..-|++++. .++||=-||.||-|=++ .++ . +++...++..+.++
T Consensus 102 dlIvfaGGDGTarDVa~av~-----~~vPvLGipaGvk~~SgvfA~--~-------P~~aa~l~~~~lkg 157 (355)
T COG3199 102 DLIVFAGGDGTARDVAEAVG-----ADVPVLGIPAGVKNYSGVFAL--S-------PEDAARLLGAFLKG 157 (355)
T ss_pred eEEEEeCCCccHHHHHhhcc-----CCCceEeeccccceecccccc--C-------hHHHHHHHHHHhcc
Confidence 46899999999999999983 36777677999987554 222 1 23667777777777
No 30
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=96.98 E-value=0.004 Score=63.69 Aligned_cols=69 Identities=20% Similarity=0.187 Sum_probs=48.3
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEE
Q 010042 133 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 212 (519)
Q Consensus 133 ~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~ 212 (519)
+...||++|||||+-.++..+.. ..+||--|++||-| |.-.+.. .++..+++.+.+++...-.+..
T Consensus 76 ~~D~ii~lGGDGT~L~~~~~~~~----~~~Pilgin~G~lg-fl~~~~~---------~~~~~~l~~~~~g~~~~~~r~~ 141 (285)
T PF01513_consen 76 GVDLIIVLGGDGTFLRAARLFGD----YDIPILGINTGTLG-FLTEFEP---------EDIEEALEKILAGEYSIEERMR 141 (285)
T ss_dssp CSSEEEEEESHHHHHHHHHHCTT----ST-EEEEEESSSST-SSSSEEG---------CGHHHHHHHHHHTHCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHhcc----CCCcEEeecCCCcc-ccccCCH---------HHHHHHHHHHhcCCeEEEEeee
Confidence 44689999999999999988754 36777778999843 3333322 2688889888887765555555
Q ss_pred Eee
Q 010042 213 ILM 215 (519)
Q Consensus 213 V~~ 215 (519)
+..
T Consensus 142 l~~ 144 (285)
T PF01513_consen 142 LEV 144 (285)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 31
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.64 E-value=0.03 Score=58.08 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=70.0
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccc-----hhhhhh-ccCcEE
Q 010042 65 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGD-----VFASEI-EKRLRL 137 (519)
Q Consensus 65 ~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l~~l~~~~d-----~~a~~~-~~~~~V 137 (519)
+++.+.+|.|+.. ..+.++...+.+.|....+ +.+.. .....+ ....... ..+. ...... +....|
T Consensus 4 ~~~~I~iv~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~-~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~D~v 76 (306)
T PRK03372 4 ASRRVLLVAHTGR--DEATEAARRVAKQLGDAGIGVRVLD-AEAVDL---GATHPAP-DDFRAMEVVDADPDAADGCELV 76 (306)
T ss_pred CccEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEee-chhhhh---ccccccc-ccccccccccchhhcccCCCEE
Confidence 4567999988744 5667788888887755432 11111 100000 0000000 0000 000011 123579
Q ss_pred EEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEE
Q 010042 138 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 213 (519)
Q Consensus 138 IV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V 213 (519)
|++|||||+-.++..+.. ..+||--|.+|+ ||+=.. ...+++..+|+.+.++...--.+..+
T Consensus 77 i~lGGDGT~L~aar~~~~----~~~PilGIN~G~-------lGFL~~---~~~~~~~~~l~~i~~g~y~i~~R~~L 138 (306)
T PRK03372 77 LVLGGDGTILRAAELARA----ADVPVLGVNLGH-------VGFLAE---AEAEDLDEAVERVVDRDYRVEERMTL 138 (306)
T ss_pred EEEcCCHHHHHHHHHhcc----CCCcEEEEecCC-------Cceecc---CCHHHHHHHHHHHHcCCceEEEeeeE
Confidence 999999999999887654 356666678877 344321 12247888999999997654444333
No 32
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.59 E-value=0.03 Score=57.52 Aligned_cols=123 Identities=18% Similarity=0.157 Sum_probs=69.6
Q ss_pred CCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEE
Q 010042 63 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVA 140 (519)
Q Consensus 63 ~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~-~~~~~VIV~ 140 (519)
+...+.+.||+|+.. .+..++..+.+.|....+ +.+.. .....+ . . .+... .+. ++...||++
T Consensus 7 ~~~~~~i~ii~~~~~---~~~~~~~~i~~~l~~~g~~~~~~~-~~~~~~----~-~-----~~~~~-~~~~~~~Dlvi~i 71 (287)
T PRK14077 7 HKNIKKIGLVTRPNV---SLDKEILKLQKILSIYKVEILLEK-ESAEIL----D-L-----PGYGL-DELFKISDFLISL 71 (287)
T ss_pred cccCCEEEEEeCCcH---HHHHHHHHHHHHHHHCCCEEEEec-chhhhh----c-c-----cccch-hhcccCCCEEEEE
Confidence 344678999999863 667788888887765443 21211 110000 0 0 00000 011 234579999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEe
Q 010042 141 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 141 GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 214 (519)
|||||+-.++..+.. ..+||--|-+|+ ||+=.. .+.+++.++|+.+.+++...-.+..+.
T Consensus 72 GGDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFLt~---~~~~~~~~~l~~i~~g~y~ie~r~~L~ 131 (287)
T PRK14077 72 GGDGTLISLCRKAAE----YDKFVLGIHAGH-------LGFLTD---ITVDEAEKFFQAFFQGEFEIEKPYMLS 131 (287)
T ss_pred CCCHHHHHHHHHhcC----CCCcEEEEeCCC-------cccCCc---CCHHHHHHHHHHHHcCCCeEEEEEEEE
Confidence 999999988877654 245544456665 444221 123578889999999875433444333
No 33
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.34 E-value=0.055 Score=55.87 Aligned_cols=127 Identities=16% Similarity=0.119 Sum_probs=70.1
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeec--CchhHHHHHH-HHHHHhhhccchhhhhh-ccCcEEEE
Q 010042 65 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEK--APDKVLHQLY-VTLEKFKAAGDVFASEI-EKRLRLIV 139 (519)
Q Consensus 65 ~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~--~p~~al~~~~-~~l~~l~~~~d~~a~~~-~~~~~VIV 139 (519)
+.+.+.||+|+.. .....++..+.+.|....+ +.+... .+..... +. ..... ... .+. +....||+
T Consensus 4 ~~~~i~ii~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~-----~~~-~~~~~~~D~vi~ 74 (296)
T PRK04539 4 PFHNIGIVTRPNT--PDIQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYT-QDTVGCHI-----VNK-TELGQYCDLVAV 74 (296)
T ss_pred CCCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecccccccchhc-cccccccc-----cch-hhcCcCCCEEEE
Confidence 3577999999755 5667778888887754432 112110 0000100 00 00000 000 011 12457999
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEe
Q 010042 140 AGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 140 ~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 214 (519)
+|||||+-.++..+.. ..+||--|-+|+ ||+=.. ...+++.++|+.+.+++...-.+..+.
T Consensus 75 lGGDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFL~~---~~~~~~~~~l~~i~~g~~~~~~r~~l~ 135 (296)
T PRK04539 75 LGGDGTFLSVAREIAP----RAVPIIGINQGH-------LGFLTQ---IPREYMTDKLLPVLEGKYLAEERILIE 135 (296)
T ss_pred ECCcHHHHHHHHHhcc----cCCCEEEEecCC-------CeEeec---cCHHHHHHHHHHHHcCCceEEEeeeEE
Confidence 9999999999887654 245544457776 555332 123468889999998875444444443
No 34
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=96.28 E-value=0.051 Score=55.95 Aligned_cols=123 Identities=13% Similarity=0.085 Sum_probs=68.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhh-hhh-ccCcEEEEEcC
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFA-SEI-EKRLRLIVAGG 142 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l~~l~~~~d~~a-~~~-~~~~~VIV~GG 142 (519)
.+.+.+|+|+.+ .....++..+.+.|....+ +.+.... ...+. . ..+. .+. .+. .....||++||
T Consensus 5 ~~~v~iv~~~~~--~~~~e~~~~i~~~L~~~g~~v~v~~~~-~~~~~-~-~~~~-------~~~~~~~~~~~d~vi~~GG 72 (291)
T PRK02155 5 FKTVALIGRYQT--PGIAEPLESLAAFLAKRGFEVVFEADT-ARNIG-L-TGYP-------ALTPEEIGARADLAVVLGG 72 (291)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecch-hhhcC-c-cccc-------ccChhHhccCCCEEEEECC
Confidence 356889988755 4666677777777754332 1121110 00000 0 0000 000 011 12357999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEe
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 214 (519)
|||+..++..+.. ..+||--|-+|+-.=|+ .+. .+++.++|+.+.++...--.++.+.
T Consensus 73 DGt~l~~~~~~~~----~~~pilGIn~G~lGFL~---~~~-------~~~~~~~l~~~~~g~~~i~~r~~L~ 130 (291)
T PRK02155 73 DGTMLGIGRQLAP----YGVPLIGINHGRLGFIT---DIP-------LDDMQETLPPMLAGNYEEEERMLLE 130 (291)
T ss_pred cHHHHHHHHHhcC----CCCCEEEEcCCCccccc---cCC-------HHHHHHHHHHHHcCCceEEEeEEEE
Confidence 9999999988754 24554445666532222 222 2478889999999876544555544
No 35
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.14 E-value=0.073 Score=55.22 Aligned_cols=128 Identities=14% Similarity=0.078 Sum_probs=66.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHH-HHhhhccchh-hhhh-ccCcEEEEEcC
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTL-EKFKAAGDVF-ASEI-EKRLRLIVAGG 142 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l-~~l~~~~d~~-a~~~-~~~~~VIV~GG 142 (519)
+.+.||+|+.. ..+..+...+.+.|....+ +.+.. .....+. ..... ...+..-+.. .... +....||++||
T Consensus 2 ~~igiv~n~~~--~~~~~~~~~l~~~L~~~g~~v~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~iGG 77 (305)
T PRK02649 2 PKAGIIYNDGK--PLAVRTAEELQDKLEAAGWEVVRAS-SSGGILG-YANPDQPVCHTGIDQLVPPGFDSSMKFAIVLGG 77 (305)
T ss_pred CEEEEEEcCCC--HHHHHHHHHHHHHHHHCCCEEEEec-chhhhcC-ccccccccccccccccChhhcccCcCEEEEEeC
Confidence 56889999743 4577788888887765442 22211 1000000 00000 0000000000 0011 12357999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEE
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 212 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~ 212 (519)
|||+-.++..+.. ..+||--|-+|+ ||+=.. ....++.++|+.+.++...--.+-.
T Consensus 78 DGTlL~aar~~~~----~~iPilGIN~G~-------lGFLt~---~~~~~~~~~l~~l~~g~y~ie~r~~ 133 (305)
T PRK02649 78 DGTVLSAARQLAP----CGIPLLTINTGH-------LGFLTE---AYLNQLDEAIDQVLAGQYTIEERTM 133 (305)
T ss_pred cHHHHHHHHHhcC----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHcCCcEEEEeee
Confidence 9999999887654 245544456664 443221 1234788899999998754333333
No 36
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.92 E-value=0.13 Score=52.92 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=67.5
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHH--H-HHHHHHhhhccchhhhhh-ccCcEEEEEcC
Q 010042 68 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQ--L-YVTLEKFKAAGDVFASEI-EKRLRLIVAGG 142 (519)
Q Consensus 68 ~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~--~-~~~l~~l~~~~d~~a~~~-~~~~~VIV~GG 142 (519)
.+.||+|+.. ..+..+++.+.+.|....+ +.+.. .....+.. . ...... .+.. ... ++...||+.||
T Consensus 2 ~igii~~~~~--~~~~~~~~~i~~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~dlvi~lGG 73 (292)
T PRK01911 2 KIAIFGQTYQ--ESASPYIQELFDELEERGAEVLIEE-KFLDFLKQDLKFHPSYDT----FSDN-EELDGSADMVISIGG 73 (292)
T ss_pred EEEEEeCCCC--HHHHHHHHHHHHHHHHCCCEEEEec-chhhhhcccccccccccc----ccch-hhcccCCCEEEEECC
Confidence 3778888744 5667778888887765443 22221 10000000 0 000000 0000 011 12457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEe
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 214 (519)
|||+-.++..+.. ..+||--|-+|+ ||+=.. .+.++++++|+.+.+++..--.+..+.
T Consensus 74 DGT~L~aa~~~~~----~~~PilGIN~G~-------lGFLt~---~~~~~~~~~l~~i~~g~~~i~~r~~L~ 131 (292)
T PRK01911 74 DGTFLRTATYVGN----SNIPILGINTGR-------LGFLAT---VSKEEIEETIDELLNGDYTIEERSLLQ 131 (292)
T ss_pred cHHHHHHHHHhcC----CCCCEEEEecCC-------CCcccc---cCHHHHHHHHHHHHcCCceEEEEeeEE
Confidence 9999998887654 245544456776 455331 123578889999999976544444443
No 37
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.84 E-value=0.12 Score=52.45 Aligned_cols=104 Identities=11% Similarity=0.063 Sum_probs=61.9
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 146 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV 146 (519)
+.+.+|+|+.. .+.++...++++|....+-... .. ++...||+.|||||+
T Consensus 3 ~~i~iv~~~~~---~a~~~~~~l~~~l~~~g~~~~~--~~-------------------------~~~D~vi~lGGDGT~ 52 (264)
T PRK03501 3 RNLFFFYKRDK---ELVEKVKPLKKIAEEYGFTVVD--HP-------------------------KNANIIVSIGGDGTF 52 (264)
T ss_pred cEEEEEECCCH---HHHHHHHHHHHHHHHCCCEEEc--CC-------------------------CCccEEEEECCcHHH
Confidence 46778888666 6667788888877654431111 00 123569999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC-CCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEE
Q 010042 147 SWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 213 (519)
Q Consensus 147 ~~Vln~l~~~~~~~~~plgiIPl-GTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V 213 (519)
-.++..+... ..+|+--|.+ | .||+=.. .+.+++.++++.+.+++..--.+..+
T Consensus 53 L~a~~~~~~~---~~~pilgIn~~G-------~lGFL~~---~~~~~~~~~l~~i~~g~~~~~~r~~l 107 (264)
T PRK03501 53 LQAVRKTGFR---EDCLYAGISTKD-------QLGFYCD---FHIDDLDKMIQAITKEEIEVRKYPTI 107 (264)
T ss_pred HHHHHHhccc---CCCeEEeEecCC-------CCeEccc---CCHHHHHHHHHHHHcCCcEEEEeeeE
Confidence 8888765431 2355322455 4 3444221 12247888999999887544344433
No 38
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=95.66 E-value=0.18 Score=55.30 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=64.2
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhcc---CcEEEEeecCchhHHH--HHHHHHHHhhhccchhhhhh-ccCcEE
Q 010042 64 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLH--QLYVTLEKFKAAGDVFASEI-EKRLRL 137 (519)
Q Consensus 64 ~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~---~qV~dl~~~~p~~al~--~~~~~l~~l~~~~d~~a~~~-~~~~~V 137 (519)
.+++.|+||+||.. .....++..+.+.|.. .+|+. .. .....+. .........-..... ..+. .....|
T Consensus 192 ~~p~~VgIV~n~~k--~~a~el~~~I~~~L~~~~gi~V~v-e~-~~a~~l~~~~~~~~~~~~~~~~~~-~~~l~~~~DlV 266 (508)
T PLN02935 192 SDPQTVLIITKPNS--TSVRVLCAEMVRWLREQKGLNIYV-EP-RVKKELLSESSYFNFVQTWEDEKE-ILLLHTKVDLV 266 (508)
T ss_pred CCCCEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCEEEE-ec-hhhhhhccccccccccccccccch-hhhcccCCCEE
Confidence 33688999999855 4566677777777652 23332 11 0000000 000000000000000 0001 124579
Q ss_pred EEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCee
Q 010042 138 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 206 (519)
Q Consensus 138 IV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~ 206 (519)
|++|||||+-.++..+.. ..+||--|-+|+ ||+=.. ....++..+|+.|.++...
T Consensus 267 IsiGGDGTlL~Aar~~~~----~~iPILGIN~G~-------LGFLt~---i~~~e~~~~Le~il~G~y~ 321 (508)
T PLN02935 267 ITLGGDGTVLWAASMFKG----PVPPVVPFSMGS-------LGFMTP---FHSEQYRDCLDAILKGPIS 321 (508)
T ss_pred EEECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------cceecc---cCHHHHHHHHHHHHcCCce
Confidence 999999999999987654 234543345554 333211 1224788899999988654
No 39
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.17 E-value=0.23 Score=50.31 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=41.2
Q ss_pred EEEEEecchh-HHHHHHhcCCCccEEEeecEEEEEEccCC--CcceeeeecCCcCCCCCCCCCCcEEEEEEeCCeeeEEe
Q 010042 385 LEIVGFRDAW-HGLVLLAPNGHGTRLAQANRVRFEFEKGA--ADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLA 461 (519)
Q Consensus 385 LEVv~~~~~~-~~~~l~~~~~~~vrl~Q~~~v~i~~~~~~--~~~~~~qiDGE~~~~~~~~~~~p~~i~I~~~~~~~mL~ 461 (519)
++++.+..+. |.+..+.....++-+-....|+|++.... .....+.+||+......+ ++.+.|+.+. ..+++++
T Consensus 164 ~~~~~itPI~Ph~~~~~~~~~rplVl~~~~~I~i~~~~~~~~~~~~~l~~DG~~~~~l~~--~d~v~i~~s~-~~~~~~v 240 (259)
T PRK00561 164 IDVIQIIELNPLLHPNQTTIQSPIILPIDTKVEFEIKKAFDHDQFPRFYADGAKLRLGNS--DTTIEISLVR-SQAMFVA 240 (259)
T ss_pred CCeEEEEeeCCCCcccccccCCCeEECCCCEEEEEEccCCCCCCcEEEEEcCCeeecCCC--CCEEEEEEcC-ccceEEE
Confidence 6666766653 32211111235566666777888775411 124678999999765322 1246666664 4777433
No 40
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.81 E-value=0.26 Score=50.10 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=58.0
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHH
Q 010042 69 VLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASW 148 (519)
Q Consensus 69 vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~ 148 (519)
+.+|.|+ ...+..+.+.+++.|....+ .+.. ++...||+.|||||+-.
T Consensus 3 i~Ii~~~---~~~~~~~~~~l~~~l~~~g~-~~~~----------------------------~~~Dlvi~iGGDGT~L~ 50 (265)
T PRK04885 3 VAIISNG---DPKSKRVASKLKKYLKDFGF-ILDE----------------------------KNPDIVISVGGDGTLLS 50 (265)
T ss_pred EEEEeCC---CHHHHHHHHHHHHHHHHcCC-ccCC----------------------------cCCCEEEEECCcHHHHH
Confidence 6667773 34566777777777754332 1100 12357999999999999
Q ss_pred HHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeE
Q 010042 149 LLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDS 210 (519)
Q Consensus 149 Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~ 210 (519)
.+..+... ...+||--|.+|+-.=|+ .+. .+++.++++.+.+++.....+
T Consensus 51 a~~~~~~~--~~~iPilGIN~G~lGFL~---~~~-------~~~~~~~l~~i~~g~y~i~~r 100 (265)
T PRK04885 51 AFHRYENQ--LDKVRFVGVHTGHLGFYT---DWR-------PFEVDKLVIALAKDPGQVVSY 100 (265)
T ss_pred HHHHhccc--CCCCeEEEEeCCCceecc---cCC-------HHHHHHHHHHHHcCCceEEEE
Confidence 88776431 124554445666522222 121 246888999999987543333
No 41
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.34 E-value=0.41 Score=53.84 Aligned_cols=58 Identities=19% Similarity=0.383 Sum_probs=41.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCee
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 206 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~ 206 (519)
..||+.|||||+-.++..+.. ..+||--|-+|+ ||+=.. ...+++.++|+.+.+++..
T Consensus 350 dlvi~lGGDGT~L~aa~~~~~----~~~PilGin~G~-------lGFL~~---~~~~~~~~~l~~~~~g~~~ 407 (569)
T PRK14076 350 SHIISIGGDGTVLRASKLVNG----EEIPIICINMGT-------VGFLTE---FSKEEIFKAIDSIISGEYE 407 (569)
T ss_pred CEEEEECCcHHHHHHHHHhcC----CCCCEEEEcCCC-------CCcCcc---cCHHHHHHHHHHHHcCCce
Confidence 579999999999999887654 345554467777 454331 1235788899999998754
No 42
>PLN02727 NAD kinase
Probab=93.08 E-value=0.71 Score=54.04 Aligned_cols=122 Identities=17% Similarity=0.161 Sum_probs=63.6
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC-cEEEEeecCchhHHHHHHHHHHHhhh-ccchhhhhh-ccCcEEEEE
Q 010042 64 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QVIDLGEKAPDKVLHQLYVTLEKFKA-AGDVFASEI-EKRLRLIVA 140 (519)
Q Consensus 64 ~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~-qV~dl~~~~p~~al~~~~~~l~~l~~-~~d~~a~~~-~~~~~VIV~ 140 (519)
.|++.|+||.++.. .....+..+.+.|... .+-.+.+....+.+... ..+..... .... ..+. .....||++
T Consensus 676 ~p~rtVgIV~K~~~---ea~~~~~eL~~~L~~~~gi~V~VE~~~a~~l~~~-~~~~~~~~~~~~~-~~el~~~~DLVIvL 750 (986)
T PLN02727 676 STPKTVLLLKKLGQ---ELMEEAKEVASFLYHQEKMNVLVEPDVHDIFARI-PGFGFVQTFYSQD-TSDLHERVDFVACL 750 (986)
T ss_pred CCCCEEEEEcCCcH---HHHHHHHHHHHHHHhCCCeEEEEecchHHHhhcc-ccccccceecccc-hhhcccCCCEEEEE
Confidence 34688999999876 4555666677776543 32111111111111000 00000000 0000 0011 123579999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCC
Q 010042 141 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAK 204 (519)
Q Consensus 141 GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~ 204 (519)
|||||+-.++..+.. ..+||--|-+|+ ||+=.. .+..++.+.|+.|.++.
T Consensus 751 GGDGTlLrAar~~~~----~~iPILGINlGr-------LGFLTd---i~~ee~~~~L~~Il~G~ 800 (986)
T PLN02727 751 GGDGVILHASNLFRG----AVPPVVSFNLGS-------LGFLTS---HYFEDFRQDLRQVIHGN 800 (986)
T ss_pred CCcHHHHHHHHHhcC----CCCCEEEEeCCC-------cccccc---CCHHHHHHHHHHHHcCC
Confidence 999999999987754 345554467774 454321 12346778888888775
No 43
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=92.58 E-value=1.7 Score=44.32 Aligned_cols=114 Identities=19% Similarity=0.170 Sum_probs=60.6
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 010042 68 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 146 (519)
Q Consensus 68 ~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV 146 (519)
++.+|+|+.. .....++..+.+.|. ..+ +.+.. .....+ . ...... .+ .+...||+.|||||+
T Consensus 2 ~i~iv~~~~~--~~~~~~~~~i~~~l~-~g~~~~~~~-~~~~~~-------~---~~~~~~-~~-~~~D~vi~lGGDGT~ 65 (271)
T PRK01185 2 KVAFVIRKDC--KRCIKIAKSIIELLP-PDWEIIYEM-EAAKAL-------G---MDGLDI-EE-INADVIITIGGDGTI 65 (271)
T ss_pred EEEEEecCCC--HHHHHHHHHHHHHHh-cCCEEEEec-hhhhhc-------C---cccCcc-cc-cCCCEEEEEcCcHHH
Confidence 3788888744 466677788887663 332 11211 111100 0 000000 00 134579999999998
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEEEe
Q 010042 147 SWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 214 (519)
Q Consensus 147 ~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 214 (519)
-.++..+ ..|.+| |-+|+= |+=.. ...+++.++|+.+.++...--.+..+.
T Consensus 66 L~a~~~~------~~PilG-IN~G~l-------GFL~~---~~~~~~~~~l~~i~~g~~~i~~r~~L~ 116 (271)
T PRK01185 66 LRTLQRA------KGPILG-INMGGL-------GFLTE---IEIDEVGSAIKKLIRGEYFIDERMKLK 116 (271)
T ss_pred HHHHHHc------CCCEEE-EECCCC-------ccCcc---cCHHHHHHHHHHHHcCCcEEEEeeEEE
Confidence 7766542 124444 466653 43321 122478889999999875444444443
No 44
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=91.41 E-value=1.2 Score=45.60 Aligned_cols=66 Identities=20% Similarity=0.262 Sum_probs=39.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHc-CCeeeEeEEE
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN-AKEMQIDSWH 212 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~-a~~~~iD~w~ 212 (519)
...||++|||||+-.++..+.. ..+||--|-+|+ ||+=.. ...+++.+.++.+.+ ++..--.+..
T Consensus 43 ~d~vi~iGGDGT~L~aa~~~~~----~~~PilgIn~G~-------lGFL~~---~~~~~~~~~l~~~~~~g~~~i~~r~~ 108 (272)
T PRK02231 43 AQLAIVIGGDGNMLGRARVLAK----YDIPLIGINRGN-------LGFLTD---IDPKNAYEQLEACLERGEFFVEERFL 108 (272)
T ss_pred CCEEEEECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHhcCCceEEEeee
Confidence 3579999999999988877654 244533347776 554321 122356667777666 6544333433
Q ss_pred E
Q 010042 213 I 213 (519)
Q Consensus 213 V 213 (519)
+
T Consensus 109 L 109 (272)
T PRK02231 109 L 109 (272)
T ss_pred E
Confidence 3
No 45
>PLN02929 NADH kinase
Probab=91.13 E-value=1.3 Score=46.02 Aligned_cols=70 Identities=20% Similarity=0.146 Sum_probs=44.9
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCC---------c--chhhccCCCCCCCCCchHHHHHHHHHHH
Q 010042 133 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG---------N--NIPFSFGWGKKNPNTDQQAVLSFLEQVK 201 (519)
Q Consensus 133 ~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTG---------N--DlAR~LGwg~~~~~~~~~~~~~~l~~i~ 201 (519)
....||++|||||+-.++..+ . ..+||--|-.|+. | |-.|++|.=.. ...+++.++|+.+.
T Consensus 64 ~~Dlvi~lGGDGT~L~aa~~~-~----~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~---~~~~~~~~~L~~il 135 (301)
T PLN02929 64 DVDLVVAVGGDGTLLQASHFL-D----DSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCA---ATAEDFEQVLDDVL 135 (301)
T ss_pred CCCEEEEECCcHHHHHHHHHc-C----CCCcEEEEECCCcccccccccccccccccCcccccc---CCHHHHHHHHHHHH
Confidence 346799999999999888776 3 2445433566642 2 22456776432 22357889999999
Q ss_pred cCCeeeEeE
Q 010042 202 NAKEMQIDS 210 (519)
Q Consensus 202 ~a~~~~iD~ 210 (519)
++....-.+
T Consensus 136 ~g~~~~~~r 144 (301)
T PLN02929 136 FGRLKPTEL 144 (301)
T ss_pred cCCceEEEe
Confidence 987543333
No 46
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system. PACS-1 connects the clathrin adaptor AP-1 to acidic cluster sorting motifs contained in the cytoplasmic domain of cargo proteins such as furin, the cation-independent mannose-6-phosphate receptor and in viral proteins such as human immunodeficiency virus type 1 Nef [].
Probab=90.50 E-value=0.77 Score=49.41 Aligned_cols=48 Identities=23% Similarity=0.339 Sum_probs=37.6
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCC---CC---CCCCEEEeeCCCCcchhhccCC
Q 010042 133 KRLRLIVAGGDGTASWLLGVVSDLK---LP---HSPPVATVPLGTGNNIPFSFGW 181 (519)
Q Consensus 133 ~~~~VIV~GGDGTV~~Vln~l~~~~---~~---~~~plgiIPlGTGNDlAR~LGw 181 (519)
..++|+|+|||-=++.||....++- .. .-..+-+||+|+ |.+||.||-
T Consensus 75 ~~vKV~v~G~~~y~~~VLr~yVE~Ls~K~~dWl~~~rFlvIPlGs-~~varyLgs 128 (414)
T PF10254_consen 75 PPVKVAVAGGQSYLSAVLRAYVEQLSHKPPDWLNYLRFLVIPLGS-HPVARYLGS 128 (414)
T ss_pred CceEEEEEccHHHHHHHHHHHHHHhccCCcccccceeEEEecCCC-CHHHHHHhc
Confidence 4568999999999999999776631 11 123478999999 999999974
No 47
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=89.64 E-value=0.69 Score=46.58 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=25.0
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCC
Q 010042 133 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGT 171 (519)
Q Consensus 133 ~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGT 171 (519)
+...||++|||||+-.++..... ..+||--|-+|+
T Consensus 25 ~~Dlvi~iGGDGTlL~a~~~~~~----~~~PvlGIN~G~ 59 (246)
T PRK04761 25 EADVIVALGGDGFMLQTLHRYMN----SGKPVYGMNRGS 59 (246)
T ss_pred cCCEEEEECCCHHHHHHHHHhcC----CCCeEEEEeCCC
Confidence 44679999999999988876544 245544456665
No 48
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=83.66 E-value=5.9 Score=40.56 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=46.3
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeeeEeEEE
Q 010042 133 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 212 (519)
Q Consensus 133 ~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~ 212 (519)
....|++.|||||+-..+...... .+||--|=.|+ ||+=.+.. ...++++++.+.+++.+..-+..
T Consensus 55 ~~d~ivvlGGDGtlL~~~~~~~~~----~~pilgin~G~-------lGFLt~~~---~~~~~~~~~~~~~~~~~~~~r~~ 120 (281)
T COG0061 55 KADLIVVLGGDGTLLRAARLLARL----DIPVLGINLGH-------LGFLTDFE---PDELEKALDALLEGEYRIEERLL 120 (281)
T ss_pred CceEEEEeCCcHHHHHHHHHhccC----CCCEEEEeCCC-------cccccccC---HHHHHHHHHHHhcCceEEEEeEE
Confidence 345799999999999999877652 34443344442 34432211 24788999999887777677777
Q ss_pred Eeee
Q 010042 213 ILMR 216 (519)
Q Consensus 213 V~~~ 216 (519)
+...
T Consensus 121 l~~~ 124 (281)
T COG0061 121 LEVS 124 (281)
T ss_pred EEEE
Confidence 6643
No 49
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=83.18 E-value=5.1 Score=41.78 Aligned_cols=45 Identities=24% Similarity=0.296 Sum_probs=27.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC--C--CCCCCCEEEeeC--CCCcchhhcc
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDL--K--LPHSPPVATVPL--GTGNNIPFSF 179 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~--~--~~~~~plgiIPl--GTGNDlAR~L 179 (519)
...||++|| |++.-+...+.-+ . ....+|+..||- |||--..+.-
T Consensus 79 ~d~IiaiGG-Gs~~D~aKa~a~~~~~~~~~~~~p~i~VPTtagtgse~t~~a 129 (332)
T cd08180 79 PDIVIALGG-GSAIDAAKAIIYFAKKLGKKKKPLFIAIPTTSGTGSEVTSFA 129 (332)
T ss_pred CCEEEEECC-chHHHHHHHHHHHHhCCCCCCCCCEEEeCCCCcchHhhCCeE
Confidence 457888888 6777666654211 1 123478888894 7775554433
No 50
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=80.95 E-value=6.4 Score=41.74 Aligned_cols=38 Identities=18% Similarity=0.361 Sum_probs=26.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcc
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNN 174 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl--GTGND 174 (519)
..||++|| |++.-+...+... ....+|+..||- ||+.|
T Consensus 86 ~~IIAvGG-Gsv~D~ak~~A~~-~~rgip~I~IPTTlla~~d 125 (355)
T cd08197 86 SVIVALGG-GVVGNIAGLLAAL-LFRGIRLVHIPTTLLAQSD 125 (355)
T ss_pred cEEEEECC-cHHHHHHHHHHHH-hccCCCEEEecCccccccc
Confidence 35777766 8999888776532 124678999998 56666
No 51
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. Dehydroquinate synthase-like. This group contains dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. They exhibit the dehydroquinate synthase structural fold. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes ne
Probab=75.56 E-value=13 Score=39.25 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=50.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcc---CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 143 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~---~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGD 143 (519)
++++|+..+..-. .+.+.+.+.|.. ..++.+....+...++.+.+.++.+.+.+ ..+...||++||
T Consensus 24 ~k~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~------~~r~d~IIaiGG- 92 (344)
T cd08169 24 DQYFFISDSGVAD----LIAHYIAEYLSKILPVHILVIEGGEEYKTFETVTRILERAIALG------ANRRTAIVAVGG- 92 (344)
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHhhcCceEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-
Confidence 6778887754432 355566666633 23333332222222222222222222110 112345777776
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcch
Q 010042 144 GTASWLLGVVSDLKLPHSPPVATVPL--GTGNNI 175 (519)
Q Consensus 144 GTV~~Vln~l~~~~~~~~~plgiIPl--GTGNDl 175 (519)
|++.-+...+... ....+|+-.||- ++++|-
T Consensus 93 Gsv~D~ak~vA~~-~~rgip~i~VPTTlla~~ds 125 (344)
T cd08169 93 GATGDVAGFVAST-LFRGIAFIRVPTTLLAQSDS 125 (344)
T ss_pred cHHHHHHHHHHHH-hccCCcEEEecCCccccccc
Confidence 8888888766532 124678999997 666663
No 52
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=74.49 E-value=13 Score=34.68 Aligned_cols=81 Identities=14% Similarity=0.233 Sum_probs=42.0
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 010042 78 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 156 (519)
Q Consensus 78 G~~~g~~~l~~~~~~L~~~qV-~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~ 156 (519)
|+..-..+.++.+..|....+ |++.........+++.+.++.+..+ .-...|.++|+++-+--|+.++..
T Consensus 8 gs~SD~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~~~~~~~~~~--------~~~viIa~AG~~a~Lpgvva~~t~- 78 (150)
T PF00731_consen 8 GSTSDLPIAEEAAKTLEEFGIPYEVRVASAHRTPERLLEFVKEYEAR--------GADVIIAVAGMSAALPGVVASLTT- 78 (150)
T ss_dssp SSGGGHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHHHTTTT--------TESEEEEEEESS--HHHHHHHHSS-
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHhccC--------CCEEEEEECCCcccchhhheeccC-
Confidence 444445566777777766555 6665422222222222222211100 113568899999999999998864
Q ss_pred CCCCCCCEEEeeCCCC
Q 010042 157 KLPHSPPVATVPLGTG 172 (519)
Q Consensus 157 ~~~~~~plgiIPlGTG 172 (519)
.|.||+ |.-++
T Consensus 79 ----~PVIgv-P~~~~ 89 (150)
T PF00731_consen 79 ----LPVIGV-PVSSG 89 (150)
T ss_dssp ----S-EEEE-EE-ST
T ss_pred ----CCEEEe-ecCcc
Confidence 466777 87665
No 53
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=71.99 E-value=21 Score=37.90 Aligned_cols=123 Identities=18% Similarity=0.154 Sum_probs=62.0
Q ss_pred ccccCceeecCCc-cc---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHHHH
Q 010042 45 YYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYVT 116 (519)
Q Consensus 45 ~~ip~~~~~~~~~-~~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q----V~dl~~~~p~~al~~~~~~ 116 (519)
|.+|..++..... .. ..... .++++||.-+.+-. ...++..+.+.|.... +|+-....|. .+.+.+.
T Consensus 1 ~~~p~~i~fG~g~l~~l~~~~~~~-g~r~livt~~~~~~--~~g~~~~v~~~L~~~~~~~~~~~~v~~~p~--~~~v~~~ 75 (380)
T cd08185 1 YYQPTKIVFGAGKLNELGEEALKP-GKKALIVTGNGSSK--KTGYLDRVIELLKQAGVEVVVFDKVEPNPT--TTTVMEG 75 (380)
T ss_pred CCCCCeEEECcCHHHHHHHHHHhc-CCeEEEEeCCCchh--hccHHHHHHHHHHHcCCeEEEeCCccCCCC--HHHHHHH
Confidence 4567777665422 11 11111 27899998766521 2345566666664322 2321112222 2222222
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC-------------------C-CCCCCCEEEee--CCCCcc
Q 010042 117 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL-------------------K-LPHSPPVATVP--LGTGNN 174 (519)
Q Consensus 117 l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~-------------------~-~~~~~plgiIP--lGTGND 174 (519)
.+.. ++ .+...||++|| |++.-+...+.-+ . ....+|+..|| .|||--
T Consensus 76 ~~~~--------~~-~~~D~IiavGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE 145 (380)
T cd08185 76 AALA--------RE-EGCDFVVGLGG-GSSMDTAKAIAFMAANEGDYWDYIFGGTGKGKPPPEKALPIIAITTTAGTGSE 145 (380)
T ss_pred HHHH--------HH-cCCCEEEEeCC-ccHHHHHHHHHHHhhCCCCHHHHhcccccccccCCCCCCCEEEEcCCChhhhc
Confidence 2211 11 23456888887 7777666554321 0 11357899999 488877
Q ss_pred hhhccCCC
Q 010042 175 IPFSFGWG 182 (519)
Q Consensus 175 lAR~LGwg 182 (519)
..+.-.+.
T Consensus 146 ~t~~avi~ 153 (380)
T cd08185 146 ADPWAVIT 153 (380)
T ss_pred cCCeEEEE
Confidence 77766554
No 54
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=71.84 E-value=15 Score=39.12 Aligned_cols=122 Identities=16% Similarity=0.164 Sum_probs=57.5
Q ss_pred ccccCceeecCCc-ccccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cE--EEEeecCchhHHHHHHHHHHH
Q 010042 45 YYIPNYILVSGSE-VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEK 119 (519)
Q Consensus 45 ~~ip~~~~~~~~~-~~~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~--qV--~dl~~~~p~~al~~~~~~l~~ 119 (519)
|.+|..++..... ...... ..++++|+..+.+-.. ..++..+.+.|... .+ |+-.+..|. .+.+.+.++.
T Consensus 2 ~~~p~~i~~G~g~l~~l~~~-~~~r~livt~~~~~~~--~g~~~~v~~~L~~~g~~~~~~~~v~~~p~--~~~v~~~~~~ 76 (375)
T cd08179 2 FTLPRDIYFGKGSLEYLKTL-KGKKAFIVTGGGSMKK--FGFLDKVEAYLKEAGIEVEVFEGVEPDPS--VETVLKGAEA 76 (375)
T ss_pred ccCCceEEECcCHHHHHHHh-cCCeEEEEeCchHHHh--CChHHHHHHHHHHcCCeEEEeCCCCCCcC--HHHHHHHHHH
Confidence 5677777765422 111111 2367777765444322 23455566655432 22 332222222 2222222221
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C------------C---CCCCCCEEEeeC--CCCcchhhcc
Q 010042 120 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L------------K---LPHSPPVATVPL--GTGNNIPFSF 179 (519)
Q Consensus 120 l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~---~------------~---~~~~~plgiIPl--GTGNDlAR~L 179 (519)
++ + .+...||++|| |++.-+...+.- . + ....+|+..||- |||--..+.-
T Consensus 77 ~~--------~-~~~D~IIavGG-GSviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTtagTGSE~t~~a 146 (375)
T cd08179 77 MR--------E-FEPDWIIALGG-GSPIDAAKAMWIFYEYPELTFEDIVKPFTLPELRNKARFCAIPSTSGTATEVTAFS 146 (375)
T ss_pred HH--------h-cCCCEEEEeCC-ccHHHHHHHHHHHHhCCCcCHHHHhccccccccCCCCCEEEeCCCCchhHhhCCeE
Confidence 11 1 13356888888 666666554421 0 0 012457888885 7776555444
Q ss_pred CC
Q 010042 180 GW 181 (519)
Q Consensus 180 Gw 181 (519)
-+
T Consensus 147 vi 148 (375)
T cd08179 147 VI 148 (375)
T ss_pred EE
Confidence 43
No 55
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol
Probab=71.53 E-value=14 Score=38.75 Aligned_cols=92 Identities=20% Similarity=0.306 Sum_probs=48.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~----qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
.++++|+..+..-. .+.+.+++.|... .++.+....+...++.+.+.++.+++.+ ..+...||++|
T Consensus 24 ~~~~livtd~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIaiG 93 (345)
T cd08195 24 GSKILIVTDENVAP----LYLEKLKAALEAAGFEVEVIVIPAGEASKSLETLEKLYDALLEAG------LDRKSLIIALG 93 (345)
T ss_pred CCeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCCCcCCHHHHHHHHHHHHHcC------CCCCCeEEEEC
Confidence 36888888766542 3566666666542 2233332222222333333333222110 11234677777
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 142 GDGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
| |++.-+...+... ....+|+..||-
T Consensus 94 G-Gsv~D~ak~vA~~-~~rgip~i~VPT 119 (345)
T cd08195 94 G-GVVGDLAGFVAAT-YMRGIDFIQIPT 119 (345)
T ss_pred C-hHHHhHHHHHHHH-HhcCCCeEEcch
Confidence 6 8888888766421 123678888884
No 56
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase. 2-hydroxyethylphosphonate (2-HEP), the presumed product of the reaction of Pald with an alcohol dehydrogenase, is a biologically novel but reasonable analog of 2-AEP and may be a constituent of as-yet undescribed natural products. In the case of Azoarcus, downstream of the dehydrogenase is a CDP-glycerol:glycerophosphate transferase homolog that may indicate the existence of a pathway for 2-HEP-derived phosphonolipid biosynthesis.
Probab=71.21 E-value=25 Score=37.15 Aligned_cols=103 Identities=19% Similarity=0.136 Sum_probs=51.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhc-cCcEEEEEcCchH
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIE-KRLRLIVAGGDGT 145 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~-~~~~VIV~GGDGT 145 (519)
++++|+..+... ...++..+.+.|....++......|..-++.+.+..+.++ +.. +...||++|| |+
T Consensus 24 ~r~lvVtd~~~~---~~g~~~~v~~~L~~~~~~~~~~v~~~pt~~~v~~~~~~~~--------~~~~~~D~IIaiGG-GS 91 (355)
T TIGR03405 24 RRVVVVTFPEAR---ALGLARRLEALLGGRLAALIDDVAPNPDVAQLDGLYARLW--------GDEGACDLVIALGG-GS 91 (355)
T ss_pred CeEEEEECcchh---hcchHHHHHHHhccCcEEEeCCCCCCcCHHHHHHHHHHHH--------hcCCCCCEEEEeCC-cc
Confidence 788888865432 2245666777665433322222122221222222222111 111 1456888887 77
Q ss_pred HHHHHHHHhcC---C----------------CCCCCCEEEeeC--CCCcchhhccCC
Q 010042 146 ASWLLGVVSDL---K----------------LPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 146 V~~Vln~l~~~---~----------------~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
+.-+...+.-+ . ....+|+..||- |||-...+.--+
T Consensus 92 viD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~P~IaVPTTagTGSE~t~~avi 148 (355)
T TIGR03405 92 VIDTAKVLAVGLRRGEFDLLLQLLRNGRDFAPTARLPLVAIPTTAGTGSEVTPWATV 148 (355)
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHhcCCccCCCCCCCEEEEcCCCcchhhhcCeEEE
Confidence 77666544221 0 113468888885 788766665443
No 57
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=71.04 E-value=18 Score=38.51 Aligned_cols=122 Identities=14% Similarity=0.189 Sum_probs=60.6
Q ss_pred ccccCceeecCCcc-c---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEee--cCc-hhHHHHHHH
Q 010042 45 YYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGE--KAP-DKVLHQLYV 115 (519)
Q Consensus 45 ~~ip~~~~~~~~~~-~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~--qV~dl~~--~~p-~~al~~~~~ 115 (519)
|++|+.++...... . .......++++|+..+..-. ..++..+++.|... ++..... ..| .+.++++..
T Consensus 3 ~~~p~~i~~G~g~l~~l~~~l~~~g~~~~lvv~~~~~~~---~~~~~~v~~~L~~~~~~~~~f~~v~~~p~~~~v~~~~~ 79 (377)
T cd08176 3 FYLPPTNLFGAGAIKEIGDELKNLGFKKALIVTDKGLVK---IGVVEKVTDVLDEAGIDYVIYDGVKPNPTITNVKDGLA 79 (377)
T ss_pred ccCCCeEEECcCHHHHHHHHHHHhCCCeEEEECCchHhh---cCcHHHHHHHHHHcCCeEEEeCCCCCCCCHHHHHHHHH
Confidence 56788877654321 1 11111225777776654422 23455566666432 2322221 122 222322222
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCCcchhhc
Q 010042 116 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFS 178 (519)
Q Consensus 116 ~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~--------------~-~~~~~plgiIPl--GTGNDlAR~ 178 (519)
.+ + + .+...||++|| |++.-+...+.-+ . ....+|+..||- |||--..+.
T Consensus 80 ~~---~--------~-~~~D~IIavGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagTgSe~t~~ 146 (377)
T cd08176 80 VF---K--------K-EGCDFIISIGG-GSPHDCAKAIGIVATNGGDIRDYEGVAKSKKPAVPIVAINTTAGTASEVTIN 146 (377)
T ss_pred HH---H--------h-cCCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhCcCccCCCCCCEEEeCCCCcchhccCCc
Confidence 21 1 1 13456888887 7777666554210 0 123578899996 888776666
Q ss_pred cCCC
Q 010042 179 FGWG 182 (519)
Q Consensus 179 LGwg 182 (519)
-.+.
T Consensus 147 avi~ 150 (377)
T cd08176 147 YVIT 150 (377)
T ss_pred EEEE
Confidence 5554
No 58
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=66.87 E-value=22 Score=37.22 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=46.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q--V--~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
++++|+.++..- ..+.+.+.+.|.... + +.+....+...++.+.+.++.+++.+ ..+...||++||
T Consensus 21 ~~~livtd~~~~----~~~~~~v~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavGG 90 (344)
T TIGR01357 21 SKLVIITDETVA----DLYADKLLEALQALGYNVLKLTVPDGEESKSLETVQRLYDQLLEAG------LDRSSTIIALGG 90 (344)
T ss_pred CeEEEEECCchH----HHHHHHHHHHHHhcCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEcC
Confidence 678888865543 235666666665422 1 23322222222222333332222110 112246777777
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 143 DGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 143 DGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
|++.-+...+... ....+|+..||-
T Consensus 91 -Gsv~D~aK~iA~~-~~~~~p~i~VPT 115 (344)
T TIGR01357 91 -GVVGDLAGFVAAT-YMRGIRFIQVPT 115 (344)
T ss_pred -hHHHHHHHHHHHH-HccCCCEEEecC
Confidence 8888887766421 124678888886
No 59
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=64.23 E-value=26 Score=36.35 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=29.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 177 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR 177 (519)
..+|++|||||+.-+... .+. ..+++--||-=--||+.-
T Consensus 93 d~Li~IGGdgs~~~a~~L-~e~---~~i~vigiPkTIDNDl~~ 131 (301)
T TIGR02482 93 EGLVVIGGDGSYTGAQKL-YEE---GGIPVIGLPGTIDNDIPG 131 (301)
T ss_pred CEEEEeCCchHHHHHHHH-HHh---hCCCEEeecccccCCCcC
Confidence 369999999998766533 221 257777799999999983
No 60
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=63.64 E-value=22 Score=37.27 Aligned_cols=43 Identities=35% Similarity=0.601 Sum_probs=31.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh---hccCCC
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP---FSFGWG 182 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg 182 (519)
..+|++|||||+.-+. .|.+ ..+++--||-==-||+. .++|.+
T Consensus 96 d~LivIGGdgS~~~a~-~L~~----~gi~vigiPkTIDNDl~gtd~tiGfd 141 (324)
T TIGR02483 96 DALIAIGGDGTLGIAR-RLAD----KGLPVVGVPKTIDNDLEATDYTFGFD 141 (324)
T ss_pred CEEEEECCchHHHHHH-HHHh----cCCCEEeeccccCCCCcCCccCcCHH
Confidence 3699999999997554 4444 24777778988899997 345554
No 61
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=63.40 E-value=26 Score=37.35 Aligned_cols=104 Identities=18% Similarity=0.173 Sum_probs=52.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 144 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~--qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDG 144 (519)
++++|+..+.+-...| +++.+.+.|... .+.......|...++.+.+.++.++ + .+...||++|| |
T Consensus 27 kr~livtd~~~~~~~g--~~~~v~~~L~~~gi~~~~f~~v~~~p~~~~v~~~~~~~~--------~-~~~D~IIaiGG-G 94 (383)
T cd08186 27 SKVLLVTGKSAYKKSG--AWDKVEPALDEHGIEYVLYNKVTPNPTVDQVDEAAKLGR--------E-FGAQAVIAIGG-G 94 (383)
T ss_pred CEEEEEcCccHHhhcC--hHHHHHHHHHHcCCeEEEeCCCCCCCCHHHHHHHHHHHH--------H-cCCCEEEEeCC-c
Confidence 6788888766543332 345555555432 2222222122222222222222111 1 13356888888 7
Q ss_pred HHHHHHHHHhcC--------------C--CCCCCCEEEeeC--CCCcchhhccCCC
Q 010042 145 TASWLLGVVSDL--------------K--LPHSPPVATVPL--GTGNNIPFSFGWG 182 (519)
Q Consensus 145 TV~~Vln~l~~~--------------~--~~~~~plgiIPl--GTGNDlAR~LGwg 182 (519)
++.-+...+.-+ + ....+|+..||- |||-..++.-.+.
T Consensus 95 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGSE~t~~avi~ 150 (383)
T cd08186 95 SPIDSAKSAAILLEHPGKTARDLYEFKFTPEKALPLIAINLTHGTGTEVDRFAVAS 150 (383)
T ss_pred cHHHHHHHHHHHHhCCCCcHHHHhCCCcccCCCCCEEEEeCCChhhhhhCCeEEEE
Confidence 777666554321 0 012468888897 8987766665543
No 62
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=62.82 E-value=44 Score=35.72 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=62.3
Q ss_pred cccccCceeecCCcc-c---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE--EEEeecCchhHHHHHHHHH
Q 010042 44 NYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTL 117 (519)
Q Consensus 44 ~~~ip~~~~~~~~~~-~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV--~dl~~~~p~~al~~~~~~l 117 (519)
.|.+|++++...... . .....-.++++|+.-+.. ....++..+++.|....+ .......|..-.+.+.+.+
T Consensus 5 ~~~~p~~i~~G~g~~~~l~~~~~~~g~~~~livt~~~~---~~~g~~~~v~~~L~~~~i~~~~f~~v~~np~~~~v~~~~ 81 (383)
T PRK09860 5 TFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNML---TKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGL 81 (383)
T ss_pred ccccCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcch---hhCccHHHHHHHHHHcCCeEEEeCCCCCCcCHHHHHHHH
Confidence 467788887664331 1 112222367777754311 222356666776654322 2222212221122233332
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C-----------C-CCCCCCEEEeeC--CCCcchhhccC
Q 010042 118 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L-----------K-LPHSPPVATVPL--GTGNNIPFSFG 180 (519)
Q Consensus 118 ~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~---~-----------~-~~~~~plgiIPl--GTGNDlAR~LG 180 (519)
+..+ + .+...||++|| |++--+...+.- . . ....+|+..||- |||-...+.--
T Consensus 82 ~~~~--------~-~~~D~IiaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTTagTGSE~t~~av 151 (383)
T PRK09860 82 KLLK--------E-NNCDSVISLGG-GSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCI 151 (383)
T ss_pred HHHH--------H-cCCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcCccCCCCCCEEEEeCCCcchhccCceEE
Confidence 2111 1 23456888888 565555544421 0 0 123578999996 99987777666
Q ss_pred CC
Q 010042 181 WG 182 (519)
Q Consensus 181 wg 182 (519)
+.
T Consensus 152 i~ 153 (383)
T PRK09860 152 IT 153 (383)
T ss_pred EE
Confidence 54
No 63
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=62.46 E-value=22 Score=39.13 Aligned_cols=56 Identities=30% Similarity=0.403 Sum_probs=38.8
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchh---hccCCCCCCCCCchHHHHHHHHHHH
Q 010042 136 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP---FSFGWGKKNPNTDQQAVLSFLEQVK 201 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln---~l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg~~~~~~~~~~~~~~l~~i~ 201 (519)
.++++|||||+.-+.. .+.+. ..++++--||-==-||+. +++|..+ +++.+.+.|.
T Consensus 179 ~L~vIGGdgT~~~A~~L~ee~~~~--g~~I~VIGIPKTIDNDI~~td~S~GFdT--------Av~~~~~aI~ 240 (459)
T PTZ00286 179 ILFTLGGDGTHRGALAIYKELRRR--KLNISVVGIPKTIDNDIPIIDESFGFQT--------AVEEAQNAIR 240 (459)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh--CCCceEEEeccccCCCCCCcccCcCchH--------HHHHHHHHHH
Confidence 6999999999875543 33222 235788888999999997 6677664 5555555544
No 64
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed
Probab=62.09 E-value=31 Score=36.45 Aligned_cols=92 Identities=22% Similarity=0.249 Sum_probs=47.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 141 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q----V~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~G 141 (519)
.++++|+..+... ..+.+.+.+.|.... ++.+....+...++.+.+.++.+++.+ ..+...||++|
T Consensus 31 ~~~~livtd~~~~----~~~~~~v~~~L~~~gi~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavG 100 (358)
T PRK00002 31 GKKVAIVTDETVA----PLYLEKLRASLEAAGFEVDVVVLPDGEQYKSLETLEKIYDALLEAG------LDRSDTLIALG 100 (358)
T ss_pred CCeEEEEECCchH----HHHHHHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEc
Confidence 4688888875552 236666777665432 222222222222222323222222110 11234577777
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 142 GDGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 142 GDGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
| |++.-+...+... ....+|+..||-
T Consensus 101 G-Gsv~D~aK~iA~~-~~~gip~i~IPT 126 (358)
T PRK00002 101 G-GVIGDLAGFAAAT-YMRGIRFIQVPT 126 (358)
T ss_pred C-cHHHHHHHHHHHH-hcCCCCEEEcCc
Confidence 6 8888888776521 124678888886
No 65
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=61.31 E-value=47 Score=35.05 Aligned_cols=122 Identities=20% Similarity=0.267 Sum_probs=60.6
Q ss_pred ccccCceeecCCc-cc---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--c--EEEEeecCchhHHHHHHHH
Q 010042 45 YYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--Q--VIDLGEKAPDKVLHQLYVT 116 (519)
Q Consensus 45 ~~ip~~~~~~~~~-~~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~--q--V~dl~~~~p~~al~~~~~~ 116 (519)
|..|+.++..... .. ..... .++++|+.-+.+-...| ++..+.+.|... + +|+-.+..|. .+.+.+.
T Consensus 1 ~~~p~~i~~G~g~l~~l~~~~~~~-g~r~lvVt~~~~~~~~g--~~~~v~~~L~~~g~~~~~~~~v~~~p~--~~~v~~~ 75 (357)
T cd08181 1 FYMPTKVYFGENCVEKHGEELAAL-GKRALIVTGKSSAKKNG--SLDDVTKALEELGIEYEIFDEVEENPS--LETIMEA 75 (357)
T ss_pred CCCCCeEEECCCHHHHHHHHHHHc-CCEEEEEeCCchHhhcC--cHHHHHHHHHHcCCeEEEeCCCCCCcC--HHHHHHH
Confidence 3567776655432 11 11111 27888887766643333 334455545332 2 2321112222 2222222
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC-------------C-CCCCCCEEEeeC--CCCcchhhccC
Q 010042 117 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL-------------K-LPHSPPVATVPL--GTGNNIPFSFG 180 (519)
Q Consensus 117 l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~-------------~-~~~~~plgiIPl--GTGNDlAR~LG 180 (519)
++.++ + .+...||++|| |++.-+...+.-+ + ....+|+..||- |||-..++.--
T Consensus 76 ~~~~~--------~-~~~D~IIavGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagTGsE~t~~av 145 (357)
T cd08181 76 VEIAK--------K-FNADFVIGIGG-GSPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTTAGTGSEVTQYSV 145 (357)
T ss_pred HHHHH--------h-cCCCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCCCcchhhhCCeEE
Confidence 22111 1 13356888887 7887777654310 0 123578888895 88877777554
Q ss_pred C
Q 010042 181 W 181 (519)
Q Consensus 181 w 181 (519)
+
T Consensus 146 i 146 (357)
T cd08181 146 L 146 (357)
T ss_pred E
Confidence 4
No 66
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=60.49 E-value=4.6 Score=42.07 Aligned_cols=64 Identities=22% Similarity=0.216 Sum_probs=39.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEe--eCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCeee
Q 010042 133 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATV--PLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQ 207 (519)
Q Consensus 133 ~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiI--PlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~~ 207 (519)
..+.||-+|||||+-....-+.+ +..|.||+= |.|+---+. ++.+++ .++..+|..+..|.-.-
T Consensus 105 waD~VisvGGDGTfL~Aasrv~~---~~~PViGvNtDP~~Seg~lc----L~~~~~----~n~~~al~k~~sgnF~w 170 (395)
T KOG4180|consen 105 WADMVISVGGDGTFLLAASRVID---DSKPVIGVNTDPTGSEGHLC----LPDKYP----SNPAGALCKLTSGNFEW 170 (395)
T ss_pred hhhEEEEecCccceeehhhhhhc---cCCceeeecCCCCcCcceEe----ccccCC----CCcHHHHHHHHhccHHH
Confidence 34579999999998777764433 245667763 666554333 343333 24666777777776543
No 67
>cd08550 GlyDH-like Glycerol_dehydrogenase-like. Families of proteins related to glycerol dehydrogenases. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site. Some subfamilies have not been characterized till now.
Probab=60.30 E-value=29 Score=36.48 Aligned_cols=41 Identities=24% Similarity=0.208 Sum_probs=28.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhc
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 178 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl--GTGNDlAR~ 178 (519)
...||++|| |++.-+...+... ..+|+..||- |||-..++.
T Consensus 78 ~d~IIavGG-Gs~~D~aK~ia~~---~~~p~i~VPTtagtgse~t~~ 120 (349)
T cd08550 78 ADVIIGVGG-GKTLDTAKAVADR---LDKPIVIVPTIASTCAASSNL 120 (349)
T ss_pred CCEEEEecC-cHHHHHHHHHHHH---cCCCEEEeCCccccCccccce
Confidence 346777877 8998888877542 3578888886 666555443
No 68
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=60.03 E-value=29 Score=36.35 Aligned_cols=37 Identities=30% Similarity=0.464 Sum_probs=29.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlA 176 (519)
..++++|||||+.-+. .|.+. .+++--||-==-||+.
T Consensus 94 d~Li~IGGdgs~~~a~-~L~e~----~i~vigiPkTIDNDi~ 130 (317)
T cd00763 94 DALVVIGGDGSYMGAM-RLTEH----GFPCVGLPGTIDNDIP 130 (317)
T ss_pred CEEEEECCchHHHHHH-HHHHc----CCCEEEecccccCCCC
Confidence 3699999999988765 34442 5788888999999998
No 69
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=59.71 E-value=49 Score=35.21 Aligned_cols=126 Identities=22% Similarity=0.225 Sum_probs=63.2
Q ss_pred cccccCceeecCCcc-c---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhcc--CcEEEEeecCchhHHHHHHHHH
Q 010042 44 NYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE--NQVIDLGEKAPDKVLHQLYVTL 117 (519)
Q Consensus 44 ~~~ip~~~~~~~~~~-~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~--~qV~dl~~~~p~~al~~~~~~l 117 (519)
+|..|..+....... . ..... .++++|+.-+.+.... .+++.+.+.|.. ..+.......+..-++.+...+
T Consensus 3 ~~~~p~~i~~G~g~~~~l~~~~~~~-~~r~livt~~~~~~~~--~~~~~v~~~L~~~g~~~~~~~~v~~~p~~~~v~~~~ 79 (382)
T cd08187 3 TFYNPTKIIFGKGTESELGKELKKY-GKKVLLVYGGGSIKKN--GLYDRVIASLKEAGIEVVELGGVEPNPRLETVREGI 79 (382)
T ss_pred eecCCCEEEECCCHHHHHHHHHHHh-CCEEEEEeCCcHHHhc--CcHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 456787777654321 1 11111 3788888766554322 345566666643 2232222211221122222222
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCCcchhhccC
Q 010042 118 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSFG 180 (519)
Q Consensus 118 ~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~--------------~-~~~~~plgiIPl--GTGNDlAR~LG 180 (519)
+.++ + .+.+.||++|| |++.-+...+.-+ + ....+|+-.||- |||--..+.-.
T Consensus 80 ~~~~--------~-~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGsE~t~~av 149 (382)
T cd08187 80 ELCK--------E-EKVDFILAVGG-GSVIDSAKAIAAGAPYDGDVWDFFTGKAKIEKALPVGTVLTLAATGSEMNGGAV 149 (382)
T ss_pred HHHH--------H-cCCCEEEEeCC-hHHHHHHHHHHhHhhCCCCHHHHhcccCCCCCCCCEEEEeCCCchhhccCCCEE
Confidence 2111 1 23456888888 7777776655321 0 023578888895 88876666655
Q ss_pred CC
Q 010042 181 WG 182 (519)
Q Consensus 181 wg 182 (519)
+.
T Consensus 150 i~ 151 (382)
T cd08187 150 IT 151 (382)
T ss_pred Ee
Confidence 44
No 70
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=59.42 E-value=55 Score=34.33 Aligned_cols=92 Identities=20% Similarity=0.136 Sum_probs=52.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EE-EeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID-LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 144 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV-~d-l~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDG 144 (519)
++++|+..+.+ ...+.+.+++.|....+ +. .....+.+.++++...+ + + .+...||++|| |
T Consensus 24 ~~~liv~d~~~----~~~~~~~l~~~L~~~~~~~~~~~~~p~~~~v~~~~~~~---~--------~-~~~D~iIavGG-G 86 (347)
T cd08172 24 KRPLIVTGPRS----WAAAKPYLPESLAAGEAFVLRYDGECSEENIERLAAQA---K--------E-NGADVIIGIGG-G 86 (347)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHhcCeEEEEEeCCCCCHHHHHHHHHHH---H--------h-cCCCEEEEeCC-c
Confidence 67888887766 23567777777743332 11 12222222232222221 1 1 12356788877 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhc
Q 010042 145 TASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 178 (519)
Q Consensus 145 TV~~Vln~l~~~~~~~~~plgiIPl--GTGNDlAR~ 178 (519)
++.-+...+... ..+|+..||- |||-..++.
T Consensus 87 s~~D~aK~ia~~---~~~p~i~VPTT~gtgse~t~~ 119 (347)
T cd08172 87 KVLDTAKAVADR---LGVPVITVPTLAATCAAWTPL 119 (347)
T ss_pred HHHHHHHHHHHH---hCCCEEEecCccccCccccee
Confidence 999888877543 2578888885 677665543
No 71
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=58.32 E-value=43 Score=35.34 Aligned_cols=47 Identities=21% Similarity=0.274 Sum_probs=28.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCCcchhhccCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~---------------~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
...||++|| |++.-+...+.-+- ....+|+..||- |||--..+...+
T Consensus 81 ~d~IiaiGG-Gs~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt~gtgse~t~~avi 144 (370)
T cd08551 81 CDGVIAVGG-GSVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTTAGTGSEVTPFAVI 144 (370)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCCCcchhhcCCeEEE
Confidence 356888887 77777666553210 012578888886 777655555544
No 72
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=57.48 E-value=48 Score=35.30 Aligned_cols=125 Identities=14% Similarity=0.186 Sum_probs=61.0
Q ss_pred ccccccCceeecCCcc-c---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHH
Q 010042 43 NNYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLY 114 (519)
Q Consensus 43 ~~~~ip~~~~~~~~~~-~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~----qV~dl~~~~p~~al~~~~ 114 (519)
..|+.|+.++...... . .......++++|+.-+..-. ..+++++...|... .+|+-.+..|. .+.+.
T Consensus 3 ~~~~~~~~i~~G~g~l~~l~~~~~~~g~~~~lvvtd~~~~~---~g~~~~v~~~L~~~g~~~~~~~~v~~~p~--~~~v~ 77 (382)
T PRK10624 3 NRMILNETAYFGRGAIGALTDEVKRRGFKKALIVTDKTLVK---CGVVAKVTDVLDAAGLAYEIYDGVKPNPT--IEVVK 77 (382)
T ss_pred ccccCCCeEEECcCHHHHHHHHHHhcCCCEEEEEeCcchhh---CcchHHHHHHHHHCCCeEEEeCCCCCCcC--HHHHH
Confidence 4577788877753221 1 11122236788887653321 12455555555432 23431122232 22222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHh---cCC--------------CCCCCCEEEeeC--CCCcch
Q 010042 115 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVS---DLK--------------LPHSPPVATVPL--GTGNNI 175 (519)
Q Consensus 115 ~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~---~~~--------------~~~~~plgiIPl--GTGNDl 175 (519)
+.++.++ + .+...||++|| |++.-+...+. ... ....+|+..||- |||--.
T Consensus 78 ~~~~~~~--------~-~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTTagTGse~ 147 (382)
T PRK10624 78 EGVEVFK--------A-SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGVAPTKKPSVPIIAIPTTAGTAAEV 147 (382)
T ss_pred HHHHHHH--------h-cCCCEEEEeCC-hHHHHHHHHHHHHHHCCCCCCHHHHhCcCcccCCCCCEEEECCCCchhhhh
Confidence 2222111 1 13346777887 77777665432 100 113478888895 788766
Q ss_pred hhccCCC
Q 010042 176 PFSFGWG 182 (519)
Q Consensus 176 AR~LGwg 182 (519)
.+...+.
T Consensus 148 t~~avi~ 154 (382)
T PRK10624 148 TINYVIT 154 (382)
T ss_pred cceeeee
Confidence 6655543
No 73
>PLN02564 6-phosphofructokinase
Probab=56.84 E-value=27 Score=38.68 Aligned_cols=57 Identities=28% Similarity=0.360 Sum_probs=36.6
Q ss_pred cEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchh---hccCCCCCCCCCchHHHHHHHHHHH
Q 010042 135 LRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP---FSFGWGKKNPNTDQQAVLSFLEQVK 201 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln---~l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg~~~~~~~~~~~~~~l~~i~ 201 (519)
..++++|||||+.-+.. .+.+.+ .++++.-||-==-||+. +++|..+ +++.+.+.|.
T Consensus 178 d~LivIGGDGS~~gA~~L~e~~~~~g--~~i~VIGIPKTIDNDI~~tD~T~GFdT--------Av~~~~~aI~ 240 (484)
T PLN02564 178 NQVYIIGGDGTQKGASVIYEEIRRRG--LKVAVAGIPKTIDNDIPVIDKSFGFDT--------AVEEAQRAIN 240 (484)
T ss_pred CEEEEECCchHHHHHHHHHHHHHHcC--CCceEEEecccccCCCcCcccCCCHHH--------HHHHHHHHHH
Confidence 36999999999876543 232222 24557778998899997 4455543 5555555443
No 74
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=56.69 E-value=28 Score=38.21 Aligned_cols=56 Identities=30% Similarity=0.382 Sum_probs=37.4
Q ss_pred EEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh---hccCCCCCCCCCchHHHHHHHHHHH
Q 010042 136 RLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP---FSFGWGKKNPNTDQQAVLSFLEQVK 201 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln~---l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg~~~~~~~~~~~~~~l~~i~ 201 (519)
.++++|||||+.-+... +.+. ...+++--||-==-||+. +++|+.+ +++.+.+.|.
T Consensus 175 ~L~vIGGdgT~~gA~~l~ee~~~~--g~~I~VIGIPKTIDNDi~~td~S~GFdT--------Av~~a~~aI~ 236 (443)
T PRK06830 175 ILFVIGGDGTLRGASAIAEEIERR--GLKISVIGIPKTIDNDINFIQKSFGFET--------AVEKATEAIR 236 (443)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh--CCCceEEEeccccCCCCcCcccCCCHHH--------HHHHHHHHHH
Confidence 69999999998765532 2222 234778888998899997 5566553 5555555544
No 75
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=55.77 E-value=43 Score=35.41 Aligned_cols=118 Identities=18% Similarity=0.105 Sum_probs=62.5
Q ss_pred ccccccCceeecCCccc----ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E-EEEeecCc-hhHHHHHH
Q 010042 43 NNYYIPNYILVSGSEVQ----RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKAP-DKVLHQLY 114 (519)
Q Consensus 43 ~~~~ip~~~~~~~~~~~----~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q--V-~dl~~~~p-~~al~~~~ 114 (519)
+.|.+|..++....... ...... ++++||.-+.+- ..+.+.+.+.|.... + |+.....| .+..+.+.
T Consensus 3 ~~f~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~ep~~~~v~~~~ 77 (366)
T PRK09423 3 RIFISPSKYVQGKGALARLGEYLKPLG-KRALVIADEFVL----GIVGDRVEASLKEAGLTVVFEVFNGECSDNEIDRLV 77 (366)
T ss_pred ccccCCceEEECCCHHHHHHHHHHHcC-CEEEEEEChhHH----HHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHH
Confidence 45777888776543211 111112 678888754442 236667777775432 2 43222222 22222222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhccCC
Q 010042 115 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 115 ~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
..+ + + .+...||++|| |++.-+...+.-+ ..+|+..||- |||--.+..-.+
T Consensus 78 ~~~---~--------~-~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPTtagtgSe~t~~avi 130 (366)
T PRK09423 78 AIA---E--------E-NGCDVVIGIGG-GKTLDTAKAVADY---LGVPVVIVPTIASTDAPTSALSVI 130 (366)
T ss_pred HHH---H--------h-cCCCEEEEecC-hHHHHHHHHHHHH---cCCCEEEeCCccccCccccCceEE
Confidence 211 1 1 13456888888 8888888777542 3578888886 555544444333
No 76
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=55.49 E-value=50 Score=35.16 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=60.1
Q ss_pred cccccCceeecCCcc-c---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 010042 44 NYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 117 (519)
Q Consensus 44 ~~~ip~~~~~~~~~~-~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~--qV~dl~~~~p~~al~~~~~~l 117 (519)
+|.+|+.++...... . .......++++|+..+..-. ..++..++..|... .+.......+..-++.+.+..
T Consensus 3 ~~~~p~~i~fG~g~l~~l~~~l~~~g~~r~lvvt~~~~~~---~g~~~~v~~~L~~~~i~~~~~~~v~~~p~~~~v~~~~ 79 (379)
T TIGR02638 3 RLILNETSYFGAGAIEDIVDEVKRRGFKKALVVTDKDLIK---FGVADKVTDLLDEAGIAYELFDEVKPNPTITVVKAGV 79 (379)
T ss_pred cccCCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcchhh---ccchHHHHHHHHHCCCeEEEECCCCCCcCHHHHHHHH
Confidence 477888887654321 1 11122236888887653321 12455566666432 222122212222122222222
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC---C--------------CCCCCCEEEeeC--CCCcchhhc
Q 010042 118 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K--------------LPHSPPVATVPL--GTGNNIPFS 178 (519)
Q Consensus 118 ~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~---~--------------~~~~~plgiIPl--GTGNDlAR~ 178 (519)
+.++ + .+...||++|| |++.-+..++.-+ . ....+|+..||- |||-...+.
T Consensus 80 ~~~~--------~-~~~D~IiaiGG-GSviD~aKaia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagTGse~t~~ 149 (379)
T TIGR02638 80 AAFK--------A-SGADYLIAIGG-GSPIDTAKAIGIISNNPEFADVRSLEGVAPTKKPGVPIIAIPTTAGTAAEVTIN 149 (379)
T ss_pred HHHH--------h-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHhhCCCccCCCCCCEEEECCCCchhhhhCCE
Confidence 2111 1 13356888888 7777666543210 0 013468888885 777665555
Q ss_pred cCC
Q 010042 179 FGW 181 (519)
Q Consensus 179 LGw 181 (519)
.-+
T Consensus 150 avi 152 (379)
T TIGR02638 150 YVI 152 (379)
T ss_pred EEE
Confidence 544
No 77
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH, EC 1.1.1.261) plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids. It catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. The activity is zinc-dependent. One characteristic feature of archaea is that their cellular membrane has an ether linkage between the glycerol backbone and the hydrocarbon residues. The polar lipids of the members of Archaea consist of di- and tetraethers of glycerol with isoprenoid alcohols bound at the sn-2 and sn-3 positions of the glycerol moiety. The archaeal polar lipids have the enantiomeric configuration of a glycerophosph
Probab=55.13 E-value=54 Score=34.24 Aligned_cols=87 Identities=16% Similarity=0.121 Sum_probs=47.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC-cEEEEeecCc-hhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QVIDLGEKAP-DKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 144 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~-qV~dl~~~~p-~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDG 144 (519)
++++|+..+.... .+...++..|... .+.......| .+.++++...+ + + .+...||++|| |
T Consensus 26 ~~~liv~d~~~~~----~~~~~v~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~---~--------~-~~~d~iIaiGG-G 88 (339)
T cd08173 26 GRVLVVTGPTTKS----IAGKKVEALLEDEGEVDVVIVEDATYEEVEKVESSA---R--------D-IGADFVIGVGG-G 88 (339)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHh---h--------h-cCCCEEEEeCC-c
Confidence 6788888765532 3566666666432 2211122222 22222222221 1 1 13356777877 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCc
Q 010042 145 TASWLLGVVSDLKLPHSPPVATVPLGTGN 173 (519)
Q Consensus 145 TV~~Vln~l~~~~~~~~~plgiIPlGTGN 173 (519)
++.-+...+.-. ..+|+..||-=.++
T Consensus 89 s~~D~aK~~a~~---~~~p~i~iPTT~~t 114 (339)
T cd08173 89 RVIDVAKVAAYK---LGIPFISVPTAASH 114 (339)
T ss_pred hHHHHHHHHHHh---cCCCEEEecCcccC
Confidence 999888877532 35788888964443
No 78
>PLN00180 NDF6 (NDH-dependent flow 6); Provisional
Probab=54.32 E-value=2.7 Score=39.08 Aligned_cols=13 Identities=46% Similarity=0.997 Sum_probs=11.0
Q ss_pred EEcCchHHHHHHH
Q 010042 139 VAGGDGTASWLLG 151 (519)
Q Consensus 139 V~GGDGTV~~Vln 151 (519)
-.|||||++|+-+
T Consensus 130 gdGGDGT~hW~Yd 142 (180)
T PLN00180 130 GDGGDGTGHWVYE 142 (180)
T ss_pred ccCCCCceeeEee
Confidence 4599999999865
No 79
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthases catalyze the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, i.e., validamycin and acarbose, are used in agricultural and biomedical applications. Validamycine A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits s
Probab=54.29 E-value=50 Score=34.98 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=22.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
..||++|| |++.-+...+..+ ....+|+..||-
T Consensus 90 d~IVaiGG-G~v~D~ak~~A~~-~~rg~p~i~VPT 122 (354)
T cd08199 90 EPVLAIGG-GVLTDVAGLAASL-YRRGTPYVRIPT 122 (354)
T ss_pred CEEEEECC-cHHHHHHHHHHHH-hcCCCCEEEEcC
Confidence 45666666 8988888877531 124678888886
No 80
>PRK14072 6-phosphofructokinase; Provisional
Probab=53.36 E-value=37 Score=36.91 Aligned_cols=41 Identities=24% Similarity=0.339 Sum_probs=28.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcC-C-CCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDL-K-LPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~-~-~~~~~plgiIPlGTGNDlA 176 (519)
..+|++|||||+.-+.. |.+. + ...++++--||-==-||+.
T Consensus 105 d~LivIGGdgS~~~a~~-L~e~~~~~g~~i~vIgIPkTIDNDl~ 147 (416)
T PRK14072 105 GYFFYNGGNDSMDTALK-VSQLAKKMGYPIRCIGIPKTIDNDLP 147 (416)
T ss_pred CEEEEECChHHHHHHHH-HHHHHHHhCCCceEEEeeecccCCCC
Confidence 36999999999876543 2221 0 1234788888987799998
No 81
>PRK15138 aldehyde reductase; Provisional
Probab=52.76 E-value=66 Score=34.45 Aligned_cols=124 Identities=19% Similarity=0.220 Sum_probs=60.7
Q ss_pred cccccCceeecCCcc----cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHH
Q 010042 44 NYYIPNYILVSGSEV----QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEK 119 (519)
Q Consensus 44 ~~~ip~~~~~~~~~~----~~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~ 119 (519)
.|.+|..++...... ..... .++++|+.-+.|= ....++.++.+.|....+.......|..-.+.+.+..+.
T Consensus 5 ~~~~P~~i~~G~g~~~~l~~~l~~--~~~~livt~~~~~--~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~ 80 (387)
T PRK15138 5 NLHTPTRILFGKGAIAGLREQIPA--DARVLITYGGGSV--KKTGVLDQVLDALKGMDVLEFGGIEPNPTYETLMKAVKL 80 (387)
T ss_pred EEeCCceEEECcCHHHHHHHHHhc--CCeEEEECCCchH--HhcCcHHHHHHHhcCCeEEEECCccCCCCHHHHHHHHHH
Confidence 466788887764321 11122 2677777543332 223456667777754433222221222222222222221
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC----------------C--CCCCCCEEEeeC--CCCcchhhcc
Q 010042 120 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL----------------K--LPHSPPVATVPL--GTGNNIPFSF 179 (519)
Q Consensus 120 l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~----------------~--~~~~~plgiIPl--GTGNDlAR~L 179 (519)
.+ + .+...||++|| |++.-+...+.-+ + ....+|+..||- |||-.....-
T Consensus 81 ~~--------~-~~~D~IIaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~iaVPTTaGTGSE~t~~a 150 (387)
T PRK15138 81 VR--------E-EKITFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILETGGKEIKSAIPMGSVLTLPATGSESNAGA 150 (387)
T ss_pred HH--------H-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHHhccCCCcCCCCCEEEEecCCccccccCCCE
Confidence 11 1 23457888888 5655554443210 0 112468888886 8887666655
Q ss_pred CC
Q 010042 180 GW 181 (519)
Q Consensus 180 Gw 181 (519)
-+
T Consensus 151 vi 152 (387)
T PRK15138 151 VI 152 (387)
T ss_pred EE
Confidence 44
No 82
>PRK03202 6-phosphofructokinase; Provisional
Probab=52.68 E-value=42 Score=35.20 Aligned_cols=37 Identities=32% Similarity=0.468 Sum_probs=29.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlA 176 (519)
..+|++|||||+.-+.. |.+ ..+++--||-==-||+.
T Consensus 95 d~Li~IGGd~s~~~a~~-L~e----~~i~vigiPkTIDNDl~ 131 (320)
T PRK03202 95 DALVVIGGDGSYMGAKR-LTE----HGIPVIGLPGTIDNDIA 131 (320)
T ss_pred CEEEEeCChHHHHHHHH-HHh----cCCcEEEecccccCCCC
Confidence 46999999999987653 444 25777779998899998
No 83
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes. Maleylacetate reductases (MAR) play an important role in the degradation of aromatic compounds in aerobic microbes. In fungi and yeasts, the enzymes are involved in the catabolism of compounds such as phenol, tyrosine, benzoate, 4-hydroxybenzoate and resorcinol. In bacteria, the enzymes contribute to the degradation of resorcinol, 2,4-dihydroxybenzoate ([beta]-resorcylate) and 2,6-dihydroxybenzoate ([gamma]-resorcylate) via hydroxyquinol and maleylacetate. Maleylacetate reductases catalyze NADH- or NADPH-dependent reduction, at the carbon-carbon double bond, of maleylacetate or 2-chloromaleylacetate to 3-oxoadipate. In the case of 2-chloromaleylacetate, Maleylacetate reductases initially catalyses the NAD(P)H-dependent dechlorination to maleylacetate, which is then reduced to 3-oxoadipate. This enzyme is a homodimer. It is inhibited by thiol-blocking reagents such as p-
Probab=51.23 E-value=75 Score=33.19 Aligned_cols=88 Identities=20% Similarity=0.269 Sum_probs=46.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeec-CchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEK-APDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 143 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q--V~dl~~~-~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGD 143 (519)
++++|+..+. ....+++.+.+.|.... +|+-... .+.+.++ +.++.++ + .+...||++||
T Consensus 24 ~~~livt~~~----~~~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~v~---~~~~~~~--------~-~~~d~IIaiGG- 86 (337)
T cd08177 24 SRALVLTTPS----LATKLAERVASALGDRVAGTFDGAVMHTPVEVTE---AAVAAAR--------E-AGADGIVAIGG- 86 (337)
T ss_pred CeEEEEcChH----HHHHHHHHHHHHhccCCcEEeCCCCCCCCHHHHH---HHHHHHH--------h-cCCCEEEEeCC-
Confidence 5677776432 22236777777776543 3331112 2222222 2222111 1 13356777877
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC-CCCcc
Q 010042 144 GTASWLLGVVSDLKLPHSPPVATVPL-GTGNN 174 (519)
Q Consensus 144 GTV~~Vln~l~~~~~~~~~plgiIPl-GTGND 174 (519)
|++.-+...+.-. ..+|+..||- -||--
T Consensus 87 Gs~iD~aK~ia~~---~~~p~i~IPTtatgse 115 (337)
T cd08177 87 GSTIDLAKAIALR---TGLPIIAIPTTLSGSE 115 (337)
T ss_pred cHHHHHHHHHHHH---hcCCEEEEcCCchhhh
Confidence 8999888877542 2577888883 25543
No 84
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=50.23 E-value=84 Score=33.35 Aligned_cols=98 Identities=17% Similarity=0.131 Sum_probs=48.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q----V~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
++++||..+.+- + ..+++.+.+.|.... +|+-....|. ++.+.+.++.++ + .+...||++||
T Consensus 24 ~r~livt~~~~~-~--~g~~~~v~~~L~~~gi~~~~~~~v~~~p~--~~~v~~~~~~~~--------~-~~~D~IIaiGG 89 (375)
T cd08194 24 KRPLIVTDKVMV-K--LGLVDKLTDSLKKEGIESAIFDDVVSEPT--DESVEEGVKLAK--------E-GGCDVIIALGG 89 (375)
T ss_pred CeEEEEcCcchh-h--cchHHHHHHHHHHCCCeEEEECCCCCCcC--HHHHHHHHHHHH--------h-cCCCEEEEeCC
Confidence 678888865543 1 124555666664322 2332222222 222333322211 1 23356888887
Q ss_pred chHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCCcchhhcc
Q 010042 143 DGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSF 179 (519)
Q Consensus 143 DGTV~~Vln~l~~~--------------~-~~~~~plgiIPl--GTGNDlAR~L 179 (519)
|++.-+...+.-+ . ....+|+..||- |||--..+.-
T Consensus 90 -GS~~D~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagtGsE~t~~a 142 (375)
T cd08194 90 -GSPIDTAKAIAVLATNGGSIRDYKGPRIVDKPGLPLIAIPTTAGTGSEVTRFT 142 (375)
T ss_pred -chHHHHHHHHHHHHhCCCCHHHHhCcccccCCCCCEEEECCCCccccccCCeE
Confidence 7777766655310 0 113468888885 6665544433
No 85
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=49.46 E-value=48 Score=34.94 Aligned_cols=42 Identities=24% Similarity=0.215 Sum_probs=28.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcC-CCCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDL-KLPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~-~~~~~~plgiIPlGTGNDlA 176 (519)
..+|++|||||+.-+...-... +-...+++--||-=--||+.
T Consensus 94 ~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPkTIDNDl~ 136 (338)
T cd00363 94 DALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPGTIDNDIK 136 (338)
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeeecccCCCc
Confidence 3699999999987654322111 01236788888977799987
No 86
>PLN02834 3-dehydroquinate synthase
Probab=49.25 E-value=60 Score=35.44 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=47.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEe--ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEE
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLG--EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIV 139 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~----qV~dl~--~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV 139 (519)
.++++||.++... ..+...+.+.|... .+++.. ...+...++.+.+.++.+.+.+ ......||+
T Consensus 100 g~rvlIVtD~~v~----~~~~~~v~~~L~~~g~~~~v~~~v~~~gE~~ksl~~v~~~~~~l~~~~------~dr~~~VIA 169 (433)
T PLN02834 100 GKRVLVVTNETVA----PLYLEKVVEALTAKGPELTVESVILPDGEKYKDMETLMKVFDKALESR------LDRRCTFVA 169 (433)
T ss_pred CCEEEEEECccHH----HHHHHHHHHHHHhcCCceEEEEEEecCCcCCCCHHHHHHHHHHHHhcC------CCcCcEEEE
Confidence 3778888876543 23666677777532 233322 1111122332333332222111 122345777
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 140 AGGDGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 140 ~GGDGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
+|| |++.-+...+... ....+|+..||-
T Consensus 170 iGG-Gsv~D~ak~~A~~-y~rgiplI~VPT 197 (433)
T PLN02834 170 LGG-GVIGDMCGFAAAS-YQRGVNFVQIPT 197 (433)
T ss_pred ECC-hHHHHHHHHHHHH-hcCCCCEEEECC
Confidence 776 8888888765321 124678999998
No 87
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=48.78 E-value=50 Score=34.58 Aligned_cols=96 Identities=16% Similarity=0.055 Sum_probs=52.0
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 143 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q--V-~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGD 143 (519)
++++|+.-+.+ ...+++.+.+.|.... + |+.....|.. +.+.+.++. +++ .+...||++||
T Consensus 23 ~r~livt~~~~----~~~~~~~v~~~L~~~~i~~~~~~~~~~p~~--~~v~~~~~~--------~~~-~~~D~IIavGG- 86 (351)
T cd08170 23 KRALIIADEFV----LDLVGAKIEESLAAAGIDARFEVFGGECTR--AEIERLAEI--------ARD-NGADVVIGIGG- 86 (351)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHHhCCCeEEEEEeCCcCCH--HHHHHHHHH--------Hhh-cCCCEEEEecC-
Confidence 67777763333 2246777777776432 2 3322222221 222222221 111 23456888888
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhccCC
Q 010042 144 GTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 144 GTV~~Vln~l~~~~~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
|++.-+...+.-+ ..+|+..||- |||--.+..-.+
T Consensus 87 GS~iD~aK~ia~~---~~~P~iaIPTTagTgse~t~~avi 123 (351)
T cd08170 87 GKTLDTAKAVADY---LGAPVVIVPTIASTDAPTSALSVI 123 (351)
T ss_pred chhhHHHHHHHHH---cCCCEEEeCCccccCcccccceEE
Confidence 8888888776542 2578888885 777655554443
No 88
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=48.64 E-value=54 Score=34.35 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=25.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcc
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNN 174 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl--GTGND 174 (519)
...||++|| |++.-+...+... ..+|+..||- |||--
T Consensus 79 ~d~iiavGG-Gs~~D~aK~ia~~---~~~p~i~VPTt~gtgse 117 (345)
T cd08171 79 ADMIFAVGG-GKAIDTVKVLADK---LGKPVFTFPTIASNCAA 117 (345)
T ss_pred CCEEEEeCC-cHHHHHHHHHHHH---cCCCEEEecCccccCcc
Confidence 356888888 8888888777542 2568888886 55543
No 89
>PLN02884 6-phosphofructokinase
Probab=45.41 E-value=54 Score=35.66 Aligned_cols=57 Identities=26% Similarity=0.317 Sum_probs=36.6
Q ss_pred cEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh---hccCCCCCCCCCchHHHHHHHHHHH
Q 010042 135 LRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP---FSFGWGKKNPNTDQQAVLSFLEQVK 201 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~---l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg~~~~~~~~~~~~~~l~~i~ 201 (519)
..+|++|||||+.-+... +... ...+++--||-==-||+. .++|..+ +++.+.+.|.
T Consensus 145 d~LivIGGdgS~~~a~~L~~~~~~~--g~~i~vIGIPkTIDNDi~~tD~TiGFdT--------Av~~~~~ai~ 207 (411)
T PLN02884 145 NMLFVLGGNGTHAGANAIHNECRKR--KMKVSVVGVPKTIDNDILLMDKTFGFDT--------AVEEAQRAIN 207 (411)
T ss_pred CEEEEECCchHHHHHHHHHHHHHHc--CCCceEEeccccccCCCcCcccCCCHHH--------HHHHHHHHHH
Confidence 369999999998755432 1111 124778888998899996 3455543 4555555443
No 90
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=45.23 E-value=33 Score=34.32 Aligned_cols=57 Identities=30% Similarity=0.553 Sum_probs=36.6
Q ss_pred EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 010042 98 VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 172 (519)
Q Consensus 98 V~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTG 172 (519)
+||....+ ++++...+.+++.. .....|+|+|=||++-.|+.+|.+ +|+--+|--+|
T Consensus 150 ~~DvGVAG----iHRLl~~l~r~~~~--------~~~~lIVvAGMEGaLPsvvagLvD------~PVIavPTsVG 206 (254)
T COG1691 150 VYDVGVAG----IHRLLSALKRLKIE--------DADVLIVVAGMEGALPSVVAGLVD------VPVIAVPTSVG 206 (254)
T ss_pred EEeeccch----HHhhhhHHHHHHhh--------CCCeEEEEcccccchHHHHHhccC------CCeEecccccc
Confidence 47765432 34555544443321 234579999999999999999975 45545576665
No 91
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=44.40 E-value=67 Score=33.63 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=24.2
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 170 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlG 170 (519)
...||++|| |++.-+...+.-+ ..+|+-.||-=
T Consensus 81 ~d~IIaIGG-Gs~~D~aK~vA~~---~~~p~i~IPTT 113 (348)
T cd08175 81 TDLIIAVGS-GTINDITKYVSYK---TGIPYISVPTA 113 (348)
T ss_pred CCEEEEECC-cHHHHHHHHHHHh---cCCCEEEecCc
Confidence 456888888 8888888877542 35788888853
No 92
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=44.27 E-value=1.1e+02 Score=32.84 Aligned_cols=125 Identities=16% Similarity=0.126 Sum_probs=60.4
Q ss_pred ccccccCceeecCCcc-c---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHH
Q 010042 43 NNYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLY 114 (519)
Q Consensus 43 ~~~~ip~~~~~~~~~~-~---~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q----V~dl~~~~p~~al~~~~ 114 (519)
..|.+|+.++...... . .....-.+.++|+.-+.. ....++..+.+.|.... +|+-....|.. +.+.
T Consensus 22 ~~f~~P~~i~fG~g~~~~l~~~~~~~g~~~~lvv~~~~~---~~~g~~~~v~~~L~~~gi~~~~~~~v~~~P~~--~~v~ 96 (395)
T PRK15454 22 KTFSVPPVTLCGPGAVSSCGQQAQTRGLKHLFVMADSFL---HQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCI--TDVC 96 (395)
T ss_pred ceeecCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcch---hhCccHHHHHHHHHHcCCeEEEECCCCCCcCH--HHHH
Confidence 4688899988765331 1 111222255555533211 12335666777775433 23211223322 2222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC---C------------CCCCCCEEEeeC--CCCcchhh
Q 010042 115 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVPL--GTGNNIPF 177 (519)
Q Consensus 115 ~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~---~------------~~~~~plgiIPl--GTGNDlAR 177 (519)
+.++. +++ .+...||++|| |++.-+..++.-+ . ....+|+..||- |||-...+
T Consensus 97 ~~~~~--------~r~-~~~D~IiavGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTtaGTGSE~t~ 166 (395)
T PRK15454 97 AAVAQ--------LRE-SGCDGVIAFGG-GSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTN 166 (395)
T ss_pred HHHHH--------HHh-cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCccHHHHhcccccCCCCCEEEECCCCcchhhhCC
Confidence 22221 111 23456888888 6655555443211 0 013468888895 88877666
Q ss_pred ccCCC
Q 010042 178 SFGWG 182 (519)
Q Consensus 178 ~LGwg 182 (519)
.--+.
T Consensus 167 ~avi~ 171 (395)
T PRK15454 167 VTVII 171 (395)
T ss_pred eEEEE
Confidence 65553
No 93
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=44.20 E-value=53 Score=35.60 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=28.7
Q ss_pred cEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~---l~~~~~~~~~plgiIPlGTGNDlA 176 (519)
..+|++|||||..-+... +.+. ...+++--||-=--||+.
T Consensus 114 d~Li~IGGdgS~~~a~~L~~~~~~~--g~~i~vvgIPkTIDNDl~ 156 (403)
T PRK06555 114 DILHTIGGDDTNTTAADLAAYLAEN--GYDLTVVGLPKTIDNDVV 156 (403)
T ss_pred CEEEEECChhHHHHHHHHHHHHHHh--CCCceEEEeeeeeeCCCC
Confidence 369999999998765432 2221 125788888999999995
No 94
>PF12219 End_tail_spike: Catalytic domain of bacteriophage endosialidase; InterPro: IPR024430 This entry represents the C-terminal domain of endosialidases which is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfil the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle [].; PDB: 3JU4_A 3GW6_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=44.01 E-value=11 Score=34.39 Aligned_cols=15 Identities=60% Similarity=0.880 Sum_probs=11.8
Q ss_pred CcEEEEEcCchHHHH
Q 010042 134 RLRLIVAGGDGTASW 148 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~ 148 (519)
.-|+|+||||||-+.
T Consensus 85 gQRlIvsGGegtss~ 99 (160)
T PF12219_consen 85 GQRLIVSGGEGTSSS 99 (160)
T ss_dssp G-EEEEESSSSSSGG
T ss_pred ccEEEEeCCCCcccC
Confidence 358999999999654
No 95
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases (Fe-ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown. They are mainly found in bacteria.
Probab=43.75 E-value=95 Score=32.92 Aligned_cols=96 Identities=17% Similarity=0.166 Sum_probs=50.1
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~----qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
++++|+..+.+. .++.+...|... .+|+.. ..|. .+.+.+.++..+ + .+...||++||
T Consensus 23 ~r~livtd~~~~------~~~~v~~~L~~~g~~~~~~~~~-~~p~--~~~v~~~~~~~~--------~-~~~D~IIaiGG 84 (374)
T cd08183 23 RRVLLVTGASSL------RAAWLIEALRAAGIEVTHVVVA-GEPS--VELVDAAVAEAR--------N-AGCDVVIAIGG 84 (374)
T ss_pred CcEEEEECCchH------HHHHHHHHHHHcCCeEEEecCC-CCcC--HHHHHHHHHHHH--------h-cCCCEEEEecC
Confidence 678888776653 455566655432 234432 2332 222333322111 1 23456888887
Q ss_pred chHHHHHHHHHhcC------------C------C-CCCCCEEEeeC--CCCcchhhccCC
Q 010042 143 DGTASWLLGVVSDL------------K------L-PHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 143 DGTV~~Vln~l~~~------------~------~-~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
|++.-+...+.-+ . + ...+|+..||- |||--..+.--+
T Consensus 85 -GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGSE~t~~avi 143 (374)
T cd08183 85 -GSVIDAGKAIAALLPNPGSVLDYLEGVGRGLPLDGPPLPFIAIPTTAGTGSEVTKNAVI 143 (374)
T ss_pred -chHHHHHHHHHHHHcCCCCHHHHHhccCccccCCCCCCCEEEecCCCchhHHhCCeEEE
Confidence 7777666554311 0 0 13467888884 677666554443
No 96
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=43.48 E-value=47 Score=37.90 Aligned_cols=46 Identities=15% Similarity=0.286 Sum_probs=32.0
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchh-----hccCCCC
Q 010042 136 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP-----FSFGWGK 183 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln---~l~~~~~~~~~plgiIPlGTGNDlA-----R~LGwg~ 183 (519)
.+|++|||||..-+.- .+.+. ...+++--||-==-||+. .++|..+
T Consensus 176 ~LvvIGGddS~~~A~~Lae~~~~~--~~~i~VIGIPKTIDNDL~~~~td~s~GFdT 229 (610)
T PLN03028 176 GLVIIGGVTSNTDAAQLAETFAEA--KCKTKVVGVPVTLNGDLKNQFVETNVGFDT 229 (610)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHc--CCCceEEEeceeeeCCCCCCCCCCCcCHHH
Confidence 5999999999875532 22221 235777778988899997 5666653
No 97
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed
Probab=43.12 E-value=1e+02 Score=32.40 Aligned_cols=113 Identities=16% Similarity=0.113 Sum_probs=55.9
Q ss_pred ccccccCceeecCCc-cc----ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC-cEEEEeecCchhHHHHHHHH
Q 010042 43 NNYYIPNYILVSGSE-VQ----RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QVIDLGEKAPDKVLHQLYVT 116 (519)
Q Consensus 43 ~~~~ip~~~~~~~~~-~~----~~~~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~-qV~dl~~~~p~~al~~~~~~ 116 (519)
+-|..|..++..... .. .......++++||..+.+... ..+.+++.|... .++..... ...++.+.+.
T Consensus 6 ~~~~~p~~i~~G~g~l~~l~~~l~~~~~~~~~livtd~~~~~~----~~~~l~~~l~~~~~~~~~~~~--~~t~~~v~~~ 79 (350)
T PRK00843 6 HWIQLPRDVVVGHGVLDDIGDVCSDLKLTGRALIVTGPTTKKI----AGDRVEENLEDAGDVEVVIVD--EATMEEVEKV 79 (350)
T ss_pred eEEeCCCeEEECCCHHHHHHHHHHHhCCCCeEEEEECCcHHHH----HHHHHHHHHHhcCCeeEEeCC--CCCHHHHHHH
Confidence 345567777755322 11 111111268899988776432 234455544321 22221211 2222222222
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcc
Q 010042 117 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 174 (519)
Q Consensus 117 l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGND 174 (519)
++.++ + .+...||++|| |++.-+...+.- ...+|+-.||-=-++|
T Consensus 80 ~~~~~--------~-~~~d~IIaiGG-Gsv~D~ak~vA~---~rgip~I~IPTT~~td 124 (350)
T PRK00843 80 EEKAK--------D-VNAGFLIGVGG-GKVIDVAKLAAY---RLGIPFISVPTAASHD 124 (350)
T ss_pred HHHhh--------c-cCCCEEEEeCC-chHHHHHHHHHH---hcCCCEEEeCCCccCC
Confidence 22211 1 12356777777 899988887753 2467888889543333
No 98
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the iron-containing alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron or zinc ions. Members of this family are mainly found in bacteria.
Probab=42.62 E-value=1.3e+02 Score=31.90 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=28.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-----------C----CCCCCCEEEeeC--CCCcchhhccCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDL-----------K----LPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~-----------~----~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
...||++|| |++--+...+.-+ . ....+|+..||- |||--..+.--+
T Consensus 82 ~D~IIaiGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~PlIaVPTTaGTGSE~t~~aVi 145 (347)
T cd08184 82 PCAIVGIGG-GSTLDVAKAVSNMLTNPGSAEDYQGWDLVKNPAVYKIGIPTLSGTGAEASRTAVL 145 (347)
T ss_pred CCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhcccccccCCCCcEEEEeCCCccccccCCcEEE
Confidence 356888887 6666665544211 0 012357888894 888766655544
No 99
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=42.55 E-value=1.1e+02 Score=32.43 Aligned_cols=19 Identities=37% Similarity=0.317 Sum_probs=13.4
Q ss_pred CcEEEEEcCchHHHHHHHHH
Q 010042 134 RLRLIVAGGDGTASWLLGVV 153 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l 153 (519)
...||++|| |++.-+...+
T Consensus 82 ~d~IIaiGG-GSviD~aK~i 100 (370)
T cd08192 82 CDGVIAFGG-GSALDLAKAV 100 (370)
T ss_pred CCEEEEeCC-chHHHHHHHH
Confidence 356888888 7777776654
No 100
>PRK14071 6-phosphofructokinase; Provisional
Probab=42.49 E-value=92 Score=33.18 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=31.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh---hccCCC
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP---FSFGWG 182 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg 182 (519)
..+|++|||||+.-+ ..|.+. ..+++--||-=--||+. .++|..
T Consensus 109 d~Li~IGGdgS~~~a-~~L~~~---~~i~vIgiPkTIDNDl~~td~t~Gf~ 155 (360)
T PRK14071 109 DALIGIGGDGSLAIL-RRLAQQ---GGINLVGIPKTIDNDVGATEVSIGFD 155 (360)
T ss_pred CEEEEECChhHHHHH-HHHHHh---cCCcEEEecccccCCCcCcccCcChh
Confidence 369999999998643 444431 26778888988899996 355554
No 101
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=42.39 E-value=1.1e+02 Score=32.40 Aligned_cols=47 Identities=19% Similarity=0.321 Sum_probs=27.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC---C-------------CCCCCCEEEeeC--CCCcchhhccCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDL---K-------------LPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~---~-------------~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
...||++|| |++.-+...+.-+ . ....+|+..||- |||-...+.--+
T Consensus 84 ~d~IIaiGG-GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGsE~t~~avi 148 (374)
T cd08189 84 CDAILAVGG-GSVIDCAKAIAARAANPKKSLRKLTGLLKVKKPLPPLFAIPTTAGTGSEVTIAAVI 148 (374)
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHhCCCCCHHHHhCccccCCCCCCEEEEECCCccccccCCeEEE
Confidence 356888887 7777666544221 0 012367888885 777666555444
No 102
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed
Probab=42.34 E-value=1.4e+02 Score=32.20 Aligned_cols=92 Identities=16% Similarity=0.244 Sum_probs=48.4
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEe-------ecCch-hHHHHHHHHHHHhhhccchhhhhhcc
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLG-------EKAPD-KVLHQLYVTLEKFKAAGDVFASEIEK 133 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q----V~dl~-------~~~p~-~al~~~~~~l~~l~~~~d~~a~~~~~ 133 (519)
.++++||..+.--. ....++..+.+.|.... +|+.. ...|. +..+.+...+.+. ...+
T Consensus 42 ~~r~liVtD~~v~~-~~~~l~~~v~~~L~~~g~~~~~~~~~~~~~~ge~~k~~~~~v~~i~~~~~~~---------~~dr 111 (389)
T PRK06203 42 PKKVLVVIDSGVLR-AHPDLLEQITAYFAAHADVLELVAEPLVVPGGEAAKNDPALVEALHAAINRH---------GIDR 111 (389)
T ss_pred CCeEEEEECchHHH-hhhhHHHHHHHHHHhcCCceeeeeeEEEccCCccCCCcHHHHHHHHHHHHHc---------CCCC
Confidence 37788888765432 11235677777775322 23311 11232 3233343333211 0122
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
...||++|| |++.-+...+..+ ....+|+-.||-
T Consensus 112 ~d~IIaiGG-Gsv~D~ak~iA~~-~~rgip~I~IPT 145 (389)
T PRK06203 112 HSYVLAIGG-GAVLDMVGYAAAT-AHRGVRLIRIPT 145 (389)
T ss_pred CceEEEeCC-cHHHHHHHHHHHH-hcCCCCEEEEcC
Confidence 346777777 8888887766432 124578888885
No 103
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=42.17 E-value=55 Score=37.00 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=31.9
Q ss_pred EEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh-----hccCCCC
Q 010042 136 RLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP-----FSFGWGK 183 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln~---l~~~~~~~~~plgiIPlGTGNDlA-----R~LGwg~ 183 (519)
.+|++|||||...+... +.+. ...+++--||-==-||+. .++|..+
T Consensus 167 ~LviIGGd~S~~~A~~Lae~~~~~--~~~i~VIGIPkTIDNDl~~~~id~s~GFdT 220 (555)
T PRK07085 167 GLVIIGGDDSNTNAAILAEYFAKH--GCKTQVIGVPKTIDGDLKNEFIETSFGFDT 220 (555)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh--CCCccEEEEeeeecCCCCCCcccccCCHHH
Confidence 59999999998765432 2221 236778888988899997 4566653
No 104
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=41.67 E-value=48 Score=37.31 Aligned_cols=45 Identities=22% Similarity=0.348 Sum_probs=30.9
Q ss_pred EEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchhh-----ccCCC
Q 010042 136 RLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIPF-----SFGWG 182 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln~---l~~~~~~~~~plgiIPlGTGNDlAR-----~LGwg 182 (519)
.+|++|||||..-+... +.+. ..++++--||-==-||+.. ++|..
T Consensus 164 ~LviIGGdgS~~~A~~Lae~~~~~--g~~i~VIGIPkTIDNDl~~~~td~s~GFd 216 (539)
T TIGR02477 164 GLVIIGGDDSNTNAALLAEYFAKH--GLKTQVIGVPKTIDGDLKNQFIETSFGFD 216 (539)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhc--CCCceEEEEeeeecCCCCCCCCCCCcCHH
Confidence 59999999998755422 2221 2357777789888999975 55655
No 105
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=39.49 E-value=1.7e+02 Score=30.85 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=45.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 146 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV 146 (519)
++++|+..+.-. ..+.+.+++.|....++.+....+...++.+.+.++.+.+.+ ......||++|| |++
T Consensus 20 ~r~lIVtD~~v~----~l~~~~l~~~L~~~~~~~~~~~e~~k~l~~v~~~~~~~~~~~------~~r~d~iIaiGG-Gsv 88 (346)
T cd08196 20 ENDVFIVDANVA----ELYRDRLDLPLDAAPVIAIDATEENKSLEAVSSVIESLRQNG------ARRNTHLVAIGG-GII 88 (346)
T ss_pred CeEEEEECccHH----HHHHHHHHHHhcCCeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-hHH
Confidence 678888876542 236667777775433333332222323333333333222110 112245777766 888
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC
Q 010042 147 SWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 147 ~~Vln~l~~~~~~~~~plgiIPl 169 (519)
.-+...+..+ ....+++-.||-
T Consensus 89 ~D~ak~vA~~-~~rgi~~i~iPT 110 (346)
T cd08196 89 QDVTTFVASI-YMRGVSWSFVPT 110 (346)
T ss_pred HHHHHHHHHH-HHcCCCeEEecc
Confidence 8877766421 113456655654
No 106
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=38.22 E-value=82 Score=33.50 Aligned_cols=48 Identities=21% Similarity=0.275 Sum_probs=28.3
Q ss_pred cCcEEEEEcCchHHHHHHHHHh---cC-----------CC-CCCCCEEEeeC--CCCcchhhccCC
Q 010042 133 KRLRLIVAGGDGTASWLLGVVS---DL-----------KL-PHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 133 ~~~~VIV~GGDGTV~~Vln~l~---~~-----------~~-~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
+...||++|| |++.-+...+. .. +. ...+|+..||- |||--.++.-.+
T Consensus 85 ~~d~IIaiGG-GsviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT~gTgSE~t~~avi 149 (377)
T cd08188 85 GCDVIIAVGG-GSPIDCAKGIGIVASNGGHILDFEGVDKITRPLPPLICIPTTAGSGADVSQFAII 149 (377)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcccccCCCCCEEEECCCCccccccCCeEEE
Confidence 3456888887 67766664331 10 00 12468888886 888766664443
No 107
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like. Glycerol-1-phosphate dehydrogenase-like. The proteins of this family have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. This family is bacteria specific.
Probab=37.01 E-value=2.1e+02 Score=29.68 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=25.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 172 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTG 172 (519)
...||++|| |++.-+...+... ..+|+..||-=-+
T Consensus 76 ~d~iIaiGG-Gsv~D~aK~vA~~---~~~p~i~vPTt~~ 110 (331)
T cd08174 76 VDAVVGIGG-GKVIDVAKYAAFL---RGIPLSVPTTNLN 110 (331)
T ss_pred CCEEEEeCC-cHHHHHHHHHHhh---cCCCEEEecCccc
Confidence 356788887 8999988877552 4678888886333
No 108
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=36.64 E-value=1.3e+02 Score=28.44 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=22.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 172 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTG 172 (519)
+.|.++|+.+-+--|+.++.. .|.||+ |.-++
T Consensus 56 viIa~AG~aa~Lpgvva~~t~-----~PVIgv-P~~~~ 87 (156)
T TIGR01162 56 VIIAGAGGAAHLPGMVAALTP-----LPVIGV-PVPSK 87 (156)
T ss_pred EEEEeCCccchhHHHHHhccC-----CCEEEe-cCCcc
Confidence 457788999999999987643 355555 77654
No 109
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP). Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) with either NADH or NADPH as a cofactor. NADH is the preferred cofactor. PnAA is a biosynthetic intermediate for several phosphonates such as the antibiotic fosfomycin, phosphinothricin tripeptide (PTT), and 2-aminoethylphosphonate (AEP). This enzyme is named PhpC in PTT biosynthesis pathway in Streptomyces hygroscopicus and S. viridochromogenes. Members of this family are only found in bacteria.
Probab=36.60 E-value=1.9e+02 Score=30.43 Aligned_cols=44 Identities=20% Similarity=0.359 Sum_probs=26.0
Q ss_pred cEEEEEcCchHHHHHHHHHhcC-----------------C--CCCCCCEEEeeC--CCCcchhhcc
Q 010042 135 LRLIVAGGDGTASWLLGVVSDL-----------------K--LPHSPPVATVPL--GTGNNIPFSF 179 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~-----------------~--~~~~~plgiIPl--GTGNDlAR~L 179 (519)
..||++|| |++.-+...+.-+ . ....+|+..||- |||--.+..-
T Consensus 79 D~IIavGG-Gs~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~a 143 (367)
T cd08182 79 DAVLAVGG-GSVLDTAKALAALLGAPREALEDLRIRNKERENRERALPLIAIPTTAGTGSEVTPFA 143 (367)
T ss_pred CEEEEeCC-cHHHHHHHHHHHHHhCCCcHHHHHHHhccCCCCCCCCCCEEEeCCCCCchhhhCCEE
Confidence 46777777 7777776655321 0 113467888886 6665444443
No 110
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=36.53 E-value=46 Score=34.19 Aligned_cols=39 Identities=36% Similarity=0.451 Sum_probs=29.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 177 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR 177 (519)
..+|++|||||+..+. .|.+. ..+++-.||-=--||++-
T Consensus 94 d~Li~IGG~gs~~~a~-~L~~~---~~i~vigiPkTIDNDi~g 132 (282)
T PF00365_consen 94 DALIVIGGDGSMKGAH-KLSEE---FGIPVIGIPKTIDNDIPG 132 (282)
T ss_dssp SEEEEEESHHHHHHHH-HHHHH---HHSEEEEEEEETTSSCTT
T ss_pred CEEEEecCCCHHHHHH-HHHhc---CceEEEEEeccccCCcCC
Confidence 3699999999987654 44421 137888889988999985
No 111
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=36.53 E-value=90 Score=32.88 Aligned_cols=99 Identities=20% Similarity=0.117 Sum_probs=51.6
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcc--Cc--EEEEeec-CchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 010042 68 PVLVFINSKSGGQLGGKLLLTYRSLLNE--NQ--VIDLGEK-APDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 142 (519)
Q Consensus 68 ~vlvivNPkSG~~~g~~~l~~~~~~L~~--~q--V~dl~~~-~p~~al~~~~~~l~~l~~~~d~~a~~~~~~~~VIV~GG 142 (519)
+++||..+ +-. ...+++.+...|.. .+ +|+-... .+.+. +.+.++.+++ .+...||++||
T Consensus 23 r~lvVt~~-~~~--~~~~~~~v~~~L~~~~i~~~~~~~~~~~p~~~~---v~~~~~~~~~---------~~~D~IIaiGG 87 (366)
T PF00465_consen 23 RVLVVTDP-SLS--KSGLVDRVLDALEEAGIEVQVFDGVGPNPTLED---VDEAAEQARK---------FGADCIIAIGG 87 (366)
T ss_dssp EEEEEEEH-HHH--HHTHHHHHHHHHHHTTCEEEEEEEESSS-BHHH---HHHHHHHHHH---------TTSSEEEEEES
T ss_pred CEEEEECc-hHH--hCccHHHHHHHHhhCceEEEEEecCCCCCcHHH---HHHHHHHHHh---------cCCCEEEEcCC
Confidence 88999887 432 22367777777732 23 3442222 23233 3333222211 23457888888
Q ss_pred chHHHHHHHHHh---cCC-------------CCCCCCEEEeeC--CCCcchhhccCCC
Q 010042 143 DGTASWLLGVVS---DLK-------------LPHSPPVATVPL--GTGNNIPFSFGWG 182 (519)
Q Consensus 143 DGTV~~Vln~l~---~~~-------------~~~~~plgiIPl--GTGNDlAR~LGwg 182 (519)
|++.-+...+. ... ....+|+..||- |||-.+.+...+.
T Consensus 88 -GS~~D~aK~va~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtGsE~t~~avi~ 144 (366)
T PF00465_consen 88 -GSVMDAAKAVALLLANPGDLRDLLGKGPPPTKPALPLIAIPTTAGTGSEVTPYAVIY 144 (366)
T ss_dssp -HHHHHHHHHHHHHHTSSSCGGGGGCECSCCSS--SEEEEEESSSSSSGCCSSEEEEE
T ss_pred -CCcCcHHHHHHhhccCCCcHHHHHhhccccccCCCcEEEeeCCcccccccccccccc
Confidence 66555555443 211 012268999996 7776776665554
No 112
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=36.28 E-value=78 Score=34.12 Aligned_cols=58 Identities=26% Similarity=0.393 Sum_probs=36.7
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcCCee
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 206 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a~~~ 206 (519)
+.||..||||||--......+ .-|||=-.-+|| ||+=.- .+..+..+.+..|.+++..
T Consensus 170 D~iItLGGDGTvL~aS~LFq~----~VPPV~sFslGs-------lGFLtp---f~f~~f~~~l~~v~~~~~~ 227 (409)
T KOG2178|consen 170 DLIITLGGDGTVLYASSLFQR----SVPPVLSFSLGS-------LGFLTP---FPFANFQEQLARVLNGRAA 227 (409)
T ss_pred eEEEEecCCccEEEehhhhcC----CCCCeEEeecCC-------cccccc---ccHHHHHHHHHHHhcCcce
Confidence 359999999998766655443 235554445553 454321 2335788889999888743
No 113
>PTZ00287 6-phosphofructokinase; Provisional
Probab=35.92 E-value=69 Score=39.89 Aligned_cols=47 Identities=21% Similarity=0.257 Sum_probs=30.5
Q ss_pred cEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchhh-----ccCCCC
Q 010042 135 LRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPF-----SFGWGK 183 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln---~l~~~~~~~~~plgiIPlGTGNDlAR-----~LGwg~ 183 (519)
..+||+|||||+.-..- .+.+.+ .+..+--||-==-||+.. ++|+.+
T Consensus 930 D~LVvIGGDgS~t~A~~LaE~f~~~g--i~i~VIGVPkTIDNDL~~~~tD~TiGFDT 984 (1419)
T PTZ00287 930 NGLVMPGSNVTITEAALLAEYFLEKK--IPTSVVGIPLTGSNNLIHELIETCVGFDS 984 (1419)
T ss_pred CEEEEECCchHHHHHHHHHHHHHhcC--CCccEEEeCceeeCCCCCCCCcCCCCHHH
Confidence 35999999999875432 122211 123366679888999986 667653
No 114
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=35.90 E-value=93 Score=36.49 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=29.2
Q ss_pred cEEEEEcCchHHHHHHHHHhc-CCC-CCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSD-LKL-PHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~-~~~-~~~~plgiIPlGTGNDlA 176 (519)
..+|++|||||..-+...... .+. ...+++-.||-=--||++
T Consensus 480 d~LivIGGdgs~~~a~~L~~~~~~~~~~~i~vvgIPkTIDNDi~ 523 (745)
T TIGR02478 480 DGLLIIGGFEAFEALLQLEQAREKYPAFRIPMVVIPATISNNVP 523 (745)
T ss_pred CEEEEeCChHHHHHHHHHHHHHhhCCCCCccEEEecccccCCCC
Confidence 369999999998765432211 011 135788889999999997
No 115
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins. Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Probab=35.55 E-value=1.2e+02 Score=31.75 Aligned_cols=32 Identities=31% Similarity=0.257 Sum_probs=23.8
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
...||++|| |++.-+...+.-. ..+|+-.||-
T Consensus 81 ~d~IIaiGG-Gsv~D~aK~iA~~---~gip~I~VPT 112 (332)
T cd08549 81 TEFLLGIGS-GTIIDLVKFVSFK---VGKPFISVPT 112 (332)
T ss_pred CCEEEEECC-cHHHHHHHHHHHH---cCCCEEEeCC
Confidence 456888888 8998888877532 3678888885
No 116
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=32.95 E-value=80 Score=35.64 Aligned_cols=45 Identities=24% Similarity=0.307 Sum_probs=30.9
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchhh-----ccCCC
Q 010042 136 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPF-----SFGWG 182 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln---~l~~~~~~~~~plgiIPlGTGNDlAR-----~LGwg 182 (519)
.+|++|||||...+.. .+.+. ..++++--||-==-||+.. ++|.+
T Consensus 169 ~LviIGGddS~~~A~~Lae~~~~~--g~~i~VIGVPKTIDNDl~~t~id~s~GFd 221 (550)
T cd00765 169 ALVVIGGDDSNTNAALLAENFRSK--GLKTRVIGVPKTIDGDLKNKEIETSFGFD 221 (550)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhc--CCCceEEEEeeeecCCCCCCCCCCCcCHH
Confidence 5999999999875542 22222 2346777789888999986 55555
No 117
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=31.88 E-value=77 Score=30.52 Aligned_cols=67 Identities=18% Similarity=0.305 Sum_probs=36.5
Q ss_pred CcEEEEEcCchHHH--HHHHHHhcCCCCCCCCEEEe---------eCCCCcchhhccCCCCCC--CCCchHHHHHHHHHH
Q 010042 134 RLRLIVAGGDGTAS--WLLGVVSDLKLPHSPPVATV---------PLGTGNNIPFSFGWGKKN--PNTDQQAVLSFLEQV 200 (519)
Q Consensus 134 ~~~VIV~GGDGTV~--~Vln~l~~~~~~~~~plgiI---------PlGTGNDlAR~LGwg~~~--~~~~~~~~~~~l~~i 200 (519)
..+|++.=|||+++ .+..++........+.+.|+ |.+...+..+++||.... .+.|.+.+.++++..
T Consensus 97 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~~~~li~vvdnN~~~~~~~~~~~~~~~~a~G~~~~~~vdG~d~~~l~~a~~~a 176 (195)
T cd02007 97 KRKVIAVIGDGALTGGMAFEALNNAGYLKSNMIVILNDNEMSISPNVGTPGNLFEELGFRYIGPVDGHNIEALIKVLKEV 176 (195)
T ss_pred CCeEEEEEcccccccChHHHHHHHHHHhCCCEEEEEECCCcccCCCCCCHHHHHHhcCCCccceECCCCHHHHHHHHHHH
Confidence 45799999999987 33333332111111222222 333456778889997642 444445555555543
No 118
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=31.86 E-value=95 Score=35.20 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=27.6
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchhhc
Q 010042 136 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPFS 178 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln---~l~~~~~~~~~plgiIPlGTGNDlAR~ 178 (519)
.+|++|||||...+.. .+.+. ..++++--||-==-||+.-.
T Consensus 193 ~LViIGGddS~~~A~~Lae~~~~~--g~~i~VIGVPKTIDNDL~~t 236 (568)
T PLN02251 193 GLVVIGGDDSNTNACLLAEYFRAK--NLKTRVIGCPKTIDGDLKSK 236 (568)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhc--CCCeeEEEeCceEeCCCCCC
Confidence 5999999999775543 22221 23466667797778999763
No 119
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=31.19 E-value=2.7e+02 Score=29.82 Aligned_cols=93 Identities=16% Similarity=0.212 Sum_probs=49.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EE----EEee---cCch-hHHHHHHHHHHHhhhccchhhhhhcc
Q 010042 66 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VI----DLGE---KAPD-KVLHQLYVTLEKFKAAGDVFASEIEK 133 (519)
Q Consensus 66 ~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~q----V~----dl~~---~~p~-~al~~~~~~l~~l~~~~d~~a~~~~~ 133 (519)
.++++||.++.-.. ....+.+.+...|.... +| .+.. .++. +.++.+...+. +. ...+
T Consensus 30 ~~r~lvVtD~~v~~-~~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~ge~~k~~~~~v~~i~~~l~---~~------~~~r 99 (369)
T cd08198 30 RPKVLVVIDSGVAQ-ANPQLASDIQAYAAAHADALRLVAPPHIVPGGEACKNDPDLVEALHAAIN---RH------GIDR 99 (369)
T ss_pred CCeEEEEECcchHH-hhhhHHHHHHHHHHhcCCceeeeeeeEecCCCccCCChHHHHHHHHHHHH---Hc------CCCc
Confidence 47889998866543 21235566666664322 22 1111 1221 22223333322 11 1123
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 170 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlG 170 (519)
...||++|| |++.-+...+... ....+|+-.||-=
T Consensus 100 ~~~IIalGG-G~v~D~ag~vA~~-~~rGip~I~IPTT 134 (369)
T cd08198 100 HSYVIAIGG-GAVLDAVGYAAAT-AHRGVRLIRIPTT 134 (369)
T ss_pred CcEEEEECC-hHHHHHHHHHHHH-hcCCCCEEEECCC
Confidence 346888887 9999988877543 2346888888853
No 120
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=30.98 E-value=2.3e+02 Score=30.26 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=28.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC----------------C----------CCCCCCEEEeeC--CCCcchhhccCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDL----------------K----------LPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~----------------~----------~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
...||++|| |++.-+...+.-+ . ....+|+..||- |||-..++..-+
T Consensus 79 ~D~IIaiGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~I~VPTTagTGSE~t~~avi 153 (398)
T cd08178 79 PDTIIALGG-GSPMDAAKIMWLFYEHPEVDFEDLAQKFMDIRKRIYKFPKLGKKAKLVAIPTTSGTGSEVTPFAVI 153 (398)
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHhCCCcchhHhhhhhcccccccccccccCCCCCEEEeCCCCcccccccCeEEE
Confidence 457888888 6666665544310 0 013468888885 788666555544
No 121
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=30.72 E-value=2.8e+02 Score=33.05 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=45.9
Q ss_pred ccccccCceeecCCcc-cccC-CCCCCeEEEEEcCCCCCCChhhHHHHHHHHhc--cC--cEEEEeecCchhHHHHHHHH
Q 010042 43 NNYYIPNYILVSGSEV-QRSS-LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLN--EN--QVIDLGEKAPDKVLHQLYVT 116 (519)
Q Consensus 43 ~~~~ip~~~~~~~~~~-~~~~-~~~~~~vlvivNPkSG~~~g~~~l~~~~~~L~--~~--qV~dl~~~~p~~al~~~~~~ 116 (519)
+-|.+|+.++...... .... ....++++||..+..- ...++..+.+.|. .. .++.+....|..-++.+.+.
T Consensus 455 ~~~~~P~~i~~G~g~l~~l~~~l~~~~~~lvVtd~~~~---~~g~~~~v~~~L~~~~~~i~~~~~~~v~~np~~~~v~~~ 531 (862)
T PRK13805 455 QWFKVPKKIYFERGSLPYLLDELDGKKRAFIVTDRFMV---ELGYVDKVTDVLKKRENGVEYEVFSEVEPDPTLSTVRKG 531 (862)
T ss_pred eeeecCCeEEECCCHHHHHHHHhcCCCEEEEEECcchh---hcchHHHHHHHHhcccCCCeEEEeCCCCCCcCHHHHHHH
Confidence 4477888887654321 1110 0123678888764332 1225666666665 22 22222221222212222222
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHH
Q 010042 117 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVV 153 (519)
Q Consensus 117 l~~l~~~~d~~a~~~~~~~~VIV~GGDGTV~~Vln~l 153 (519)
++.++ + .+...||++|| |++.-+...+
T Consensus 532 ~~~~~--------~-~~~D~IIaiGG-GSviD~AK~i 558 (862)
T PRK13805 532 AELMR--------S-FKPDTIIALGG-GSPMDAAKIM 558 (862)
T ss_pred HHHHH--------h-cCCCEEEEeCC-chHHHHHHHH
Confidence 22111 1 13356888887 7777666554
No 122
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=29.23 E-value=2.5e+02 Score=29.70 Aligned_cols=46 Identities=26% Similarity=0.271 Sum_probs=27.3
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC--------------CC-CCCCCEEEeeC--CCCcchhhccC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDL--------------KL-PHSPPVATVPL--GTGNNIPFSFG 180 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~--------------~~-~~~~plgiIPl--GTGNDlAR~LG 180 (519)
...||++|| |++.-+...+.-+ +. ...+|+..||- |||-...+.-.
T Consensus 84 ~D~IIaiGG-Gs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgSe~t~~av 146 (376)
T cd08193 84 ADGVIGFGG-GSSMDVAKLVAVLAGSDQPLADMYGVDLVAGPRLPLILVPTTAGTGSEVTPIAI 146 (376)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCCCccCCCCCCEEEeCCCCcchHhhCCeEE
Confidence 356888887 7777776655321 00 13467888885 66655554443
No 123
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=28.68 E-value=1.7e+02 Score=34.34 Aligned_cols=42 Identities=21% Similarity=0.173 Sum_probs=27.0
Q ss_pred cEEEEEcCchHHHHHHH----------HHhcC-C-------CCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLG----------VVSDL-K-------LPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln----------~l~~~-~-------~~~~~plgiIPlGTGNDlA 176 (519)
..+|++|||||+.-+.. .+.+. + ....+++--||-==-||++
T Consensus 96 d~LivIGGdgS~~~a~~l~~e~~~~~~~l~~~~~i~~~~~~~~~~l~vvGiPkTIDNDl~ 155 (745)
T TIGR02478 96 DNLVVIGGDGSLTGADLFREEWPSLLEELVDTGKITAEQAEEHRHLTIVGLVGSIDNDMC 155 (745)
T ss_pred CEEEEECChhHHHHHHHHHHHhHHHHHHHHHccchhHHHHhcCCCCcEEEEccccccCCC
Confidence 46999999999865431 11110 0 1235778888955599998
No 124
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.43 E-value=1.5e+02 Score=27.50 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=37.9
Q ss_pred EEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHc
Q 010042 136 RLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 202 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~ 202 (519)
.-+.++|+- ...++..+..+ ...++-+-+|=+|| ||+.+.... ..-.+++.++++.+..
T Consensus 44 ~n~g~~G~t-~~~~~~~l~~~-~~~~pd~Vii~~G~-ND~~~~~~~-----~~~~~~l~~li~~i~~ 102 (191)
T cd01836 44 RLFAKTGAT-SADLLRQLAPL-PETRFDVAVISIGV-NDVTHLTSI-----ARWRKQLAELVDALRA 102 (191)
T ss_pred EEEecCCcC-HHHHHHHHHhc-ccCCCCEEEEEecc-cCcCCCCCH-----HHHHHHHHHHHHHHHh
Confidence 467888984 45666666542 23467788998996 788653221 1123567788888876
No 125
>PTZ00468 phosphofructokinase family protein; Provisional
Probab=25.98 E-value=1.1e+02 Score=37.96 Aligned_cols=46 Identities=24% Similarity=0.325 Sum_probs=31.8
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchhh-----ccCCCC
Q 010042 136 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPF-----SFGWGK 183 (519)
Q Consensus 136 ~VIV~GGDGTV~~Vln---~l~~~~~~~~~plgiIPlGTGNDlAR-----~LGwg~ 183 (519)
.+|++|||||..-+.. .+.+. ..++++--||-==-||+.. ++|.++
T Consensus 199 ~LVvIGGDgS~t~A~~LaEy~~~~--g~~I~VIGIPKTIDNDL~g~~tD~S~GFdT 252 (1328)
T PTZ00468 199 GLVVIGGDDSNTNAAVLAEYFKRN--SSSTVVVGCPKTIDGDLKNEVIETSFGYDT 252 (1328)
T ss_pred EEEEECCchHHHHHHHHHHHHHhc--CCCeeEEEEeEEEcCCCCCCcCCCCCCHHH
Confidence 5999999999875432 22222 2347777789888999984 667653
No 126
>PRK10586 putative oxidoreductase; Provisional
Probab=25.69 E-value=3.1e+02 Score=29.12 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=25.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl--GTGNDlA 176 (519)
..||++|| |++.-+...+... ..+|+..||- |||--.+
T Consensus 88 d~iiavGG-Gs~iD~aK~~a~~---~~~p~i~vPT~a~t~s~~s 127 (362)
T PRK10586 88 QVVIGVGG-GALLDTAKALARR---LGLPFVAIPTIAATCAAWT 127 (362)
T ss_pred CEEEEecC-cHHHHHHHHHHhh---cCCCEEEEeCCcccccccc
Confidence 45777776 7888888777542 3678999996 5554444
No 127
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=25.57 E-value=3.3e+02 Score=29.03 Aligned_cols=87 Identities=24% Similarity=0.358 Sum_probs=54.0
Q ss_pred cccccCceeecCCcc-cccCCCC-CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhh
Q 010042 44 NYYIPNYILVSGSEV-QRSSLIP-SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFK 121 (519)
Q Consensus 44 ~~~ip~~~~~~~~~~-~~~~~~~-~~~vlvivNPkSG~~~g~~~l~~~~~~L~~~qV~dl~~~~p~~al~~~~~~l~~l~ 121 (519)
.|..|..++.....- ......| -.+|+|.+---|= +..-+..+..+.|...+++++..-.|...++.+.+.++
T Consensus 5 ~y~nPTki~FGkg~i~~l~~ei~~~~kVLi~YGGGSI--KrnGvydqV~~~Lkg~~~~E~~GVEPNP~~~Tv~kaV~--- 79 (384)
T COG1979 5 TYHNPTKILFGKGQIAELREEIPKDAKVLIVYGGGSI--KKNGVYDQVVEALKGIEVIEFGGVEPNPRLETLMKAVE--- 79 (384)
T ss_pred cccCCceEEecCchHHHHHhhccccCeEEEEecCccc--cccchHHHHHHHhcCceEEEecCCCCCchHHHHHHHHH---
Confidence 578899999876551 2222222 2789998853322 33446777888888888888876556665665666553
Q ss_pred hccchhhhhhccCc-EEEEEcC
Q 010042 122 AAGDVFASEIEKRL-RLIVAGG 142 (519)
Q Consensus 122 ~~~d~~a~~~~~~~-~VIV~GG 142 (519)
++++ +.. -|+++||
T Consensus 80 -----i~ke--e~idflLAVGG 94 (384)
T COG1979 80 -----ICKE--ENIDFLLAVGG 94 (384)
T ss_pred -----HHHH--cCceEEEEecC
Confidence 2222 344 4778887
No 128
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit. Nearly every member of this protein family is the beta subunit, or else the C-terminal region, of sulfopyruvate decarboxylase, in an archaeal species capable of coenzyme M biosynthesis. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=25.20 E-value=1.9e+02 Score=27.46 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=41.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCC-CCEEEe------------eCCCC--cc---hhhccCCCCCCCCCchHHHHH
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHS-PPVATV------------PLGTG--NN---IPFSFGWGKKNPNTDQQAVLS 195 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~-~plgiI------------PlGTG--ND---lAR~LGwg~~~~~~~~~~~~~ 195 (519)
..+||++-|||+...-++.|........ +.+-|| +..+. -| +|+++||.....-.+..+++.
T Consensus 59 ~~~Vv~i~GDG~f~m~~~el~ta~~~~~~pv~~vV~NN~~yg~~~~q~~~~~~~~d~~~lA~a~G~~~~~~v~~~~~l~~ 138 (181)
T TIGR03846 59 DRTVIVIDGDGSLLMNLGVLPTIAAESPKNLILVILDNGAYGSTGNQPTPASRRTDLELVAKAAGIRNVEKVADEEELRD 138 (181)
T ss_pred CCcEEEEEcchHHHhhhhHHHHHHHhCCCCeEEEEEeCCccccccCcCCCCCCCCCHHHHHHHCCCCeEEEeCCHHHHHH
Confidence 4469999999998866665543211111 222332 22221 13 688999874220123456777
Q ss_pred HHHHHHcCCeeeEeE
Q 010042 196 FLEQVKNAKEMQIDS 210 (519)
Q Consensus 196 ~l~~i~~a~~~~iD~ 210 (519)
+|+.+....+.-+++
T Consensus 139 al~a~~~~~p~li~v 153 (181)
T TIGR03846 139 ALKALAMKGPTFIHV 153 (181)
T ss_pred HHHHHcCCCCEEEEE
Confidence 777444444555555
No 129
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=25.10 E-value=3.6e+02 Score=28.71 Aligned_cols=47 Identities=26% Similarity=0.240 Sum_probs=29.2
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCCcchhhccCC
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPFSFGW 181 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~---------------~~~~~plgiIPl--GTGNDlAR~LGw 181 (519)
...||++|| |++.-+...+.-+- ....+|+..||- |||-...+.-.+
T Consensus 80 ~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi 143 (386)
T cd08191 80 PDVIIGLGG-GSCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTTAGTGSEVTPVAVL 143 (386)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCCCcchhhhCCeEEE
Confidence 356888887 78777776553210 012568888884 787766665444
No 130
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=25.03 E-value=1.6e+02 Score=34.76 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=27.9
Q ss_pred cEEEEEcCchHHHHHH----------HHHhcCC--------CCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLL----------GVVSDLK--------LPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vl----------n~l~~~~--------~~~~~plgiIPlGTGNDlA 176 (519)
..+||+|||||+.-+. ..+.+.+ ....+++--||-==-||++
T Consensus 99 d~LvvIGGdgSl~gA~~l~~e~~~l~~el~~~g~i~~~~~~~~~~l~vVGiPkTIDNDl~ 158 (762)
T cd00764 99 TNLCVIGGDGSLTGADLFRSEWPSLLEELVKDGKITEEEVAKYQHLNIVGMVGSIDNDFC 158 (762)
T ss_pred CEEEEeCCchHHHHHHHHHHhhhHHHHHHHhcCcccHHHHhcCCCceEEEeccceeCCCC
Confidence 4699999999986543 1222211 1134677778988899998
No 131
>PRK05948 precorrin-2 methyltransferase; Provisional
Probab=24.48 E-value=7.1e+02 Score=24.79 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=22.5
Q ss_pred CcEEEEEcCc----hHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 134 RLRLIVAGGD----GTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 134 ~~~VIV~GGD----GTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
...+++..|| ||..+++..+.+. .....+-+||-
T Consensus 93 ~~v~~l~~GDp~~ys~~~~l~~~l~~~--~~~~~veivPG 130 (238)
T PRK05948 93 EDVAFACEGDVSFYSTFTYLAQTLQEL--YPQVAIQTIPG 130 (238)
T ss_pred CeEEEEeCCChHHHHHHHHHHHHHHhc--CCCCCEEEECC
Confidence 3568899999 5556666666542 13567888883
No 132
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=23.20 E-value=3.7e+02 Score=27.10 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=24.1
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 010042 126 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 169 (519)
Q Consensus 126 ~~a~~~~~~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl 169 (519)
+++.-......+|.+|| +|+.|++.. .+|.-++|.
T Consensus 234 ~m~~lm~~aDl~Is~~G-~T~~E~~a~--------g~P~i~i~~ 268 (279)
T TIGR03590 234 NMAELMNEADLAIGAAG-STSWERCCL--------GLPSLAICL 268 (279)
T ss_pred HHHHHHHHCCEEEECCc-hHHHHHHHc--------CCCEEEEEe
Confidence 34444455667888999 999998742 467777776
No 133
>PTZ00287 6-phosphofructokinase; Provisional
Probab=22.94 E-value=1.5e+02 Score=37.00 Aligned_cols=49 Identities=20% Similarity=0.350 Sum_probs=31.0
Q ss_pred cEEEEEcCchHHHHHHHHHhcCC-CCCCCCEEEeeCCCCcchh-----hccCCCC
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLK-LPHSPPVATVPLGTGNNIP-----FSFGWGK 183 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~-~~~~~plgiIPlGTGNDlA-----R~LGwg~ 183 (519)
..+|++|||||..-+...-.... ...++.+-.||-==-||+. .++|.++
T Consensus 273 d~LViIGGddS~~~A~~Lae~~~~~gi~i~VIGIPKTIDNDL~~~gTD~S~GFDT 327 (1419)
T PTZ00287 273 NGLVIIGGDGSNSNAALISEYFAERQIPISIIGIPKTIDGDLKSEAIEISFGFDT 327 (1419)
T ss_pred CEEEEECChhHHHHHHHHHHHHHhcCCCeeEEEEeeeecCCCCCCCCCcCCCHHH
Confidence 35999999999876653221110 1122335668988899998 5666653
No 134
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=21.95 E-value=1e+02 Score=28.14 Aligned_cols=60 Identities=15% Similarity=0.146 Sum_probs=33.4
Q ss_pred EEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCchHHHHHHHHHHHcC
Q 010042 137 LIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 203 (519)
Q Consensus 137 VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~i~~a 203 (519)
-..++|+.| .+++.-+...-...+|.+.+|=+|| ||+.+.. +. ..-.+++.++++.+...
T Consensus 27 N~Gi~G~~~-~~~~~~~~~~~~~~~p~~vvi~~G~-ND~~~~~--~~---~~~~~~~~~lv~~i~~~ 86 (171)
T cd04502 27 NRGFGGSTL-ADCLHYFDRLVLPYQPRRVVLYAGD-NDLASGR--TP---EEVLRDFRELVNRIRAK 86 (171)
T ss_pred ecCcccchH-HHHHHHHHhhhccCCCCEEEEEEec-CcccCCC--CH---HHHHHHHHHHHHHHHHH
Confidence 446778854 4454444332122467788888887 7875432 21 11234566777777653
No 135
>PRK06756 flavodoxin; Provisional
Probab=21.73 E-value=3.2e+02 Score=24.50 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=17.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcc
Q 010042 67 CPVLVFINSKSGGQLGGKLLLTYRSLLNE 95 (519)
Q Consensus 67 ~~vlvivNPkSG~~~g~~~l~~~~~~L~~ 95 (519)
..++||+=+.+| ....+.+.+.+.|..
T Consensus 2 mkv~IiY~S~tG--nTe~vA~~ia~~l~~ 28 (148)
T PRK06756 2 SKLVMIFASMSG--NTEEMADHIAGVIRE 28 (148)
T ss_pred ceEEEEEECCCc--hHHHHHHHHHHHHhh
Confidence 467888866555 555666677666643
No 136
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=21.71 E-value=3.8e+02 Score=30.48 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=24.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 172 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTG 172 (519)
+.|.++|+.+.+--|+.++.. .|.||+ |..+|
T Consensus 468 v~i~~ag~~~~l~~~~a~~t~-----~pvi~v-p~~~~ 499 (577)
T PLN02948 468 VIIAGAGGAAHLPGMVASMTP-----LPVIGV-PVKTS 499 (577)
T ss_pred EEEEEcCccccchHHHhhccC-----CCEEEc-CCCCC
Confidence 568899999999999988753 355555 77666
No 137
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=20.63 E-value=3.9e+02 Score=30.01 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=25.8
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhh
Q 010042 134 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPF 177 (519)
Q Consensus 134 ~~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPl--GTGNDlAR 177 (519)
...||++|| |++.-+...+... ....+|+..||- -..+|-+-
T Consensus 270 ~D~IIAIGG-Gsv~D~AKfvA~~-y~rGi~~i~vPTTllA~vDss~ 313 (542)
T PRK14021 270 SDAIVGLGG-GAATDLAGFVAAT-WMRGIRYVNCPTSLLAMVDAST 313 (542)
T ss_pred CcEEEEEcC-hHHHHHHHHHHHH-HHcCCCEEEeCChHHhhhcccc
Confidence 345677776 8888888776531 114678888886 34444443
No 138
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=20.49 E-value=4.6e+02 Score=27.90 Aligned_cols=38 Identities=32% Similarity=0.409 Sum_probs=26.5
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~~~~~~~plgiIPlGTGNDlA 176 (519)
..+||+|||||..-..- |.+. ...++-=||-==-||++
T Consensus 96 d~LvvIGGDgS~~gA~~-Lae~---~~i~vVGvPkTIDNDi~ 133 (347)
T COG0205 96 DALVVIGGDGSYTGAAL-LAEE---GGIPVVGVPKTIDNDIS 133 (347)
T ss_pred CEEEEECCCChHHHHHH-HHHh---cCCcEEecCCCccCCCc
Confidence 46999999999876543 2221 22566666888889998
No 139
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=20.41 E-value=4.6e+02 Score=31.00 Aligned_cols=41 Identities=27% Similarity=0.425 Sum_probs=29.6
Q ss_pred cEEEEEcCchHHHHHHHHHhcC--CC-CCCCCEEEeeCCCCcchh
Q 010042 135 LRLIVAGGDGTASWLLGVVSDL--KL-PHSPPVATVPLGTGNNIP 176 (519)
Q Consensus 135 ~~VIV~GGDGTV~~Vln~l~~~--~~-~~~~plgiIPlGTGNDlA 176 (519)
..+|++|||||..-+.. |.+. +. ...+|+-.||-=--||+.
T Consensus 480 d~LivIGGdgs~~~a~~-L~~~~~~y~~~~i~vVgIPkTIDNDv~ 523 (762)
T cd00764 480 DGLIIVGGFEAYKGLLQ-LREAREQYEEFCIPMVLIPATVSNNVP 523 (762)
T ss_pred CEEEEECChhHHHHHHH-HHHHHhhCCCCCccEEEecccccCCCC
Confidence 36999999999886653 3221 11 135888889999999997
Done!