estExt_Genewise1_v1.C_LG_II3255 protein (Populus trichocarpa)

STRING 9.05

estExt_Genewise1_v1.C_LG_II3255 protein (Populus trichocarpa) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	estExt_Genewise1_v1.C_LG_II3255	arginine-tRNA ligase (EC-6.1.1.19) (590 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	grail3.0023017401	aspartate-tRNA ligase (EC-6.1.1.12) (530 aa)		•	•	•	•	0.871
	gw1.64.262.1	aminoacyl-tRNA ligase (EC-6.1.1.5) (1028 aa)		•	•	•	•	0.847
	gw1.XI.1444.1	aminoacyl-tRNA ligase (EC-6.1.1.4) (889 aa)	•	•			•	0.838
	gw1.VII.873.1	aminoacyl-tRNA ligase (EC-6.1.1.5) (1117 aa)		•	•	•	•	0.831
	gw1.XIX.1762.1	histidine-tRNA ligase (475 aa)		•			•	0.814
	gw1.28.724.1	histidine-tRNA ligase (EC-6.1.1.21) (441 aa)					•	0.788
	estExt_Genewise1_v1.C_LG_V3371	serine-tRNA ligase (EC-6.1.1.11) (447 aa)		•			•	0.783
	eugene3.00050325	alanyl-tRNA synthetase (EC-6.1.1.7) (973 aa)		•			•	0.777
	fgenesh4_pm.C_LG_X000986	hypothetical protein (932 aa)		•	•		•	0.773
	eugene3.29520003	annotation not avaliable (742 aa)					•	0.772

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: medium (45%)

Permalink