Query 010044
Match_columns 519
No_of_seqs 223 out of 1302
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 18:38:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010044.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010044hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 9E-190 3E-194 1506.3 38.8 468 50-519 1-469 (555)
2 1pj3_A NAD-dependent malic enz 100.0 3E-189 1E-193 1505.4 37.4 469 50-519 3-474 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 4E-189 1E-193 1509.4 36.1 472 46-519 33-506 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 9E-111 3E-115 883.9 23.3 321 128-519 55-386 (487)
5 2a9f_A Putative malic enzyme ( 100.0 3E-105 9E-110 832.5 17.1 319 121-519 23-348 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1E-101 4E-106 803.7 17.3 318 121-519 27-352 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 2.4E-75 8.2E-80 615.4 18.6 320 121-519 21-355 (439)
8 3gvp_A Adenosylhomocysteinase 99.0 3.4E-09 1.2E-13 112.1 15.4 169 252-459 111-318 (435)
9 3h9u_A Adenosylhomocysteinase; 99.0 2.4E-09 8.2E-14 113.3 12.4 130 298-461 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.5 2.5E-08 8.5E-13 103.8 2.8 218 166-448 26-294 (401)
11 3ond_A Adenosylhomocysteinase; 98.1 6.1E-06 2.1E-10 88.6 10.4 132 298-462 225-366 (488)
12 3n58_A Adenosylhomocysteinase; 98.1 1.8E-05 6.2E-10 84.4 11.9 138 298-469 207-369 (464)
13 1l7d_A Nicotinamide nucleotide 97.6 0.00059 2E-08 70.0 13.4 225 167-448 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.4 0.00012 4.2E-09 76.9 6.1 110 328-455 187-322 (405)
15 3p2y_A Alanine dehydrogenase/p 97.1 0.00045 1.6E-08 72.0 6.4 104 329-449 182-305 (381)
16 3r3j_A Glutamate dehydrogenase 97.1 0.022 7.6E-07 60.8 18.8 190 253-461 145-368 (456)
17 3k92_A NAD-GDH, NAD-specific g 97.0 0.013 4.3E-07 62.1 15.4 178 253-449 126-329 (424)
18 3aoe_E Glutamate dehydrogenase 97.0 0.0076 2.6E-07 63.6 13.6 186 253-461 123-332 (419)
19 4fcc_A Glutamate dehydrogenase 96.9 0.053 1.8E-06 57.8 19.7 183 252-449 140-354 (450)
20 3d4o_A Dipicolinate synthase s 96.9 0.0069 2.4E-07 59.6 11.9 123 309-460 133-256 (293)
21 1a4i_A Methylenetetrahydrofola 96.5 0.0048 1.6E-07 62.6 7.4 96 309-448 143-239 (301)
22 3l07_A Bifunctional protein fo 96.4 0.0073 2.5E-07 60.8 8.0 92 311-446 141-233 (285)
23 2yfq_A Padgh, NAD-GDH, NAD-spe 96.2 0.04 1.4E-06 58.2 13.2 178 253-449 116-326 (421)
24 2bma_A Glutamate dehydrogenase 96.2 0.064 2.2E-06 57.5 14.5 179 254-449 159-372 (470)
25 1v8b_A Adenosylhomocysteinase; 96.1 0.027 9.3E-07 60.3 11.4 124 305-461 234-357 (479)
26 3p2o_A Bifunctional protein fo 96.1 0.012 4E-07 59.4 8.1 96 310-449 139-236 (285)
27 1edz_A 5,10-methylenetetrahydr 96.1 0.0069 2.3E-07 61.9 6.2 113 313-449 150-278 (320)
28 3jyo_A Quinate/shikimate dehyd 96.1 0.012 4.1E-07 58.5 7.8 88 315-422 111-205 (283)
29 3ngx_A Bifunctional protein fo 96.1 0.011 3.9E-07 59.2 7.6 92 309-446 130-222 (276)
30 1b0a_A Protein (fold bifunctio 96.0 0.0099 3.4E-07 60.0 7.0 96 309-448 137-233 (288)
31 1v9l_A Glutamate dehydrogenase 96.0 0.07 2.4E-06 56.4 13.6 186 254-461 116-334 (421)
32 3aog_A Glutamate dehydrogenase 96.0 0.1 3.5E-06 55.4 14.7 188 253-461 140-353 (440)
33 3pwz_A Shikimate dehydrogenase 96.0 0.013 4.5E-07 57.9 7.5 156 262-449 44-219 (272)
34 4a5o_A Bifunctional protein fo 95.9 0.016 5.6E-07 58.4 7.8 107 311-461 141-253 (286)
35 3don_A Shikimate dehydrogenase 95.7 0.011 3.8E-07 58.7 5.7 111 315-449 101-214 (277)
36 4a26_A Putative C-1-tetrahydro 95.7 0.018 6.2E-07 58.4 7.3 95 308-446 142-239 (300)
37 3d64_A Adenosylhomocysteinase; 95.5 0.028 9.7E-07 60.4 8.5 110 309-449 258-367 (494)
38 1c1d_A L-phenylalanine dehydro 95.5 0.052 1.8E-06 56.0 10.0 173 255-461 92-275 (355)
39 1gpj_A Glutamyl-tRNA reductase 95.4 0.095 3.2E-06 54.1 11.7 102 328-449 164-269 (404)
40 2tmg_A Protein (glutamate dehy 95.4 0.38 1.3E-05 50.7 16.3 178 254-449 115-319 (415)
41 3tnl_A Shikimate dehydrogenase 95.4 0.023 7.8E-07 57.6 6.7 91 315-422 138-237 (315)
42 3t4e_A Quinate/shikimate dehyd 95.3 0.026 8.8E-07 57.1 6.9 90 316-422 133-231 (312)
43 2c2x_A Methylenetetrahydrofola 95.2 0.033 1.1E-06 56.1 7.3 99 309-449 136-235 (281)
44 3oj0_A Glutr, glutamyl-tRNA re 95.2 0.01 3.5E-07 51.7 3.1 109 309-449 4-113 (144)
45 2rir_A Dipicolinate synthase, 95.1 0.033 1.1E-06 54.8 7.0 111 322-460 148-258 (300)
46 2v6b_A L-LDH, L-lactate dehydr 95.1 0.0069 2.3E-07 60.3 2.0 124 333-473 2-140 (304)
47 1bgv_A Glutamate dehydrogenase 95.1 0.65 2.2E-05 49.5 17.0 178 255-449 137-350 (449)
48 2egg_A AROE, shikimate 5-dehyd 95.0 0.024 8.4E-07 56.3 5.6 87 316-422 125-215 (297)
49 1nvt_A Shikimate 5'-dehydrogen 94.9 0.021 7.3E-07 55.9 4.7 118 212-375 32-159 (287)
50 3u62_A Shikimate dehydrogenase 94.8 0.038 1.3E-06 54.0 6.3 145 262-447 42-201 (253)
51 3tri_A Pyrroline-5-carboxylate 94.5 0.072 2.5E-06 52.1 7.6 121 331-480 3-127 (280)
52 1pjc_A Protein (L-alanine dehy 94.4 0.062 2.1E-06 54.6 7.0 96 329-448 165-269 (361)
53 3mw9_A GDH 1, glutamate dehydr 94.4 0.22 7.4E-06 53.8 11.4 179 253-449 136-352 (501)
54 2o4c_A Erythronate-4-phosphate 94.4 0.28 9.6E-06 51.0 11.9 117 299-447 81-208 (380)
55 1hyh_A L-hicdh, L-2-hydroxyiso 94.4 0.057 1.9E-06 53.3 6.4 102 332-450 2-126 (309)
56 1mld_A Malate dehydrogenase; o 94.3 0.098 3.3E-06 52.4 8.0 101 333-449 2-120 (314)
57 1leh_A Leucine dehydrogenase; 94.2 0.1 3.5E-06 53.8 8.2 159 259-449 93-264 (364)
58 1pzg_A LDH, lactate dehydrogen 94.0 0.086 2.9E-06 53.2 7.0 124 332-472 10-157 (331)
59 2hk9_A Shikimate dehydrogenase 94.0 0.13 4.4E-06 50.1 8.1 108 315-447 113-222 (275)
60 3u95_A Glycoside hydrolase, fa 93.8 0.078 2.7E-06 56.5 6.6 39 427-468 140-178 (477)
61 2eez_A Alanine dehydrogenase; 93.6 0.12 4.3E-06 52.4 7.4 97 328-448 163-268 (369)
62 3oet_A Erythronate-4-phosphate 93.6 0.36 1.2E-05 50.3 10.9 119 298-448 83-212 (381)
63 1gtm_A Glutamate dehydrogenase 93.6 0.57 2E-05 49.2 12.5 115 254-380 115-251 (419)
64 3o8q_A Shikimate 5-dehydrogena 93.5 0.11 3.7E-06 51.6 6.4 120 212-375 29-159 (281)
65 3fbt_A Chorismate mutase and s 93.4 0.1 3.4E-06 52.1 6.2 104 316-449 107-218 (282)
66 2g1u_A Hypothetical protein TM 93.4 0.11 3.9E-06 45.6 5.9 102 327-447 15-119 (155)
67 3dtt_A NADP oxidoreductase; st 93.4 0.17 5.6E-06 48.3 7.4 109 325-449 13-127 (245)
68 2ekl_A D-3-phosphoglycerate de 93.3 0.65 2.2E-05 46.5 12.0 121 298-447 90-233 (313)
69 2ewd_A Lactate dehydrogenase,; 93.3 0.08 2.7E-06 52.6 5.3 100 332-450 5-125 (317)
70 2i6t_A Ubiquitin-conjugating e 93.3 0.17 5.7E-06 50.7 7.6 120 332-472 15-150 (303)
71 3ce6_A Adenosylhomocysteinase; 93.3 0.56 1.9E-05 50.4 12.1 108 323-461 266-374 (494)
72 1ldn_A L-lactate dehydrogenase 93.3 0.047 1.6E-06 54.6 3.6 126 332-473 7-149 (316)
73 2hjr_A Malate dehydrogenase; m 93.0 0.081 2.8E-06 53.3 4.8 127 332-476 15-160 (328)
74 3hdj_A Probable ornithine cycl 93.0 0.39 1.3E-05 48.3 9.7 113 319-459 111-227 (313)
75 2d5c_A AROE, shikimate 5-dehyd 92.9 0.18 6.1E-06 48.5 6.9 104 316-447 102-207 (263)
76 1t2d_A LDH-P, L-lactate dehydr 92.9 0.094 3.2E-06 52.8 5.2 123 332-476 5-155 (322)
77 2zqz_A L-LDH, L-lactate dehydr 92.9 0.094 3.2E-06 53.0 5.1 127 331-473 9-151 (326)
78 2gcg_A Glyoxylate reductase/hy 92.9 0.83 2.8E-05 45.8 12.0 122 298-447 98-247 (330)
79 1o6z_A MDH, malate dehydrogena 92.9 0.059 2E-06 53.6 3.6 126 332-473 1-145 (303)
80 1b8p_A Protein (malate dehydro 92.8 0.048 1.7E-06 54.8 2.9 111 332-449 6-136 (329)
81 3d0o_A L-LDH 1, L-lactate dehy 92.7 0.09 3.1E-06 52.7 4.7 128 330-473 5-149 (317)
82 1ez4_A Lactate dehydrogenase; 92.7 0.11 3.9E-06 52.1 5.5 126 332-473 6-147 (318)
83 3fef_A Putative glucosidase LP 92.6 0.12 4E-06 55.0 5.6 106 329-449 3-149 (450)
84 3tum_A Shikimate dehydrogenase 92.5 0.19 6.5E-06 49.7 6.6 48 316-374 110-157 (269)
85 2hmt_A YUAA protein; RCK, KTN, 92.5 0.067 2.3E-06 45.0 2.9 103 329-449 4-108 (144)
86 1jw9_B Molybdopterin biosynthe 92.4 0.11 3.6E-06 50.3 4.6 38 328-376 28-65 (249)
87 2dbq_A Glyoxylate reductase; D 92.4 1.3 4.5E-05 44.5 12.8 120 299-447 90-241 (334)
88 1a5z_A L-lactate dehydrogenase 92.4 0.13 4.4E-06 51.3 5.3 121 333-473 2-142 (319)
89 2rcy_A Pyrroline carboxylate r 92.2 0.69 2.4E-05 43.6 9.9 92 331-450 4-95 (262)
90 1zud_1 Adenylyltransferase THI 92.2 0.14 4.9E-06 49.5 5.3 102 328-445 25-150 (251)
91 4e12_A Diketoreductase; oxidor 92.2 0.039 1.3E-06 53.7 1.2 32 332-375 5-36 (283)
92 1x7d_A Ornithine cyclodeaminas 92.1 0.23 7.8E-06 50.7 6.8 114 316-457 116-238 (350)
93 1s6y_A 6-phospho-beta-glucosid 92.0 0.055 1.9E-06 57.3 2.2 127 332-472 8-175 (450)
94 3vku_A L-LDH, L-lactate dehydr 92.0 0.17 5.8E-06 51.4 5.7 128 330-473 8-151 (326)
95 1y6j_A L-lactate dehydrogenase 92.0 0.18 6.1E-06 50.6 5.8 122 332-473 8-149 (318)
96 1nyt_A Shikimate 5-dehydrogena 91.8 0.27 9.4E-06 47.7 6.7 49 315-375 103-151 (271)
97 1obb_A Maltase, alpha-glucosid 91.8 0.17 5.9E-06 54.1 5.7 124 331-472 3-174 (480)
98 2vhw_A Alanine dehydrogenase; 91.7 0.19 6.5E-06 51.4 5.8 96 328-447 165-269 (377)
99 3d1l_A Putative NADP oxidoredu 91.7 0.17 5.9E-06 48.0 5.1 99 327-449 6-105 (266)
100 1oju_A MDH, malate dehydrogena 91.7 0.16 5.4E-06 50.8 5.0 124 333-472 2-143 (294)
101 1u8x_X Maltose-6'-phosphate gl 91.5 0.081 2.8E-06 56.4 2.9 126 331-472 28-194 (472)
102 1p77_A Shikimate 5-dehydrogena 91.4 0.23 7.9E-06 48.3 5.7 49 315-375 103-151 (272)
103 3h5n_A MCCB protein; ubiquitin 91.2 0.64 2.2E-05 47.4 9.0 101 327-444 114-240 (353)
104 2xxj_A L-LDH, L-lactate dehydr 91.2 0.11 3.9E-06 51.9 3.4 126 332-473 1-142 (310)
105 4g2n_A D-isomer specific 2-hyd 91.1 1.3 4.5E-05 45.2 11.3 122 298-448 116-265 (345)
106 1ur5_A Malate dehydrogenase; o 91.1 0.18 6.1E-06 50.2 4.7 123 332-472 3-144 (309)
107 1lld_A L-lactate dehydrogenase 91.1 0.17 5.8E-06 49.5 4.5 105 331-450 7-128 (319)
108 3ba1_A HPPR, hydroxyphenylpyru 91.1 1 3.6E-05 45.6 10.4 91 326-448 159-253 (333)
109 2i99_A MU-crystallin homolog; 91.1 0.59 2E-05 46.4 8.4 116 316-460 122-240 (312)
110 3kkj_A Amine oxidase, flavin-c 91.0 0.19 6.6E-06 43.4 4.2 31 333-375 4-34 (336)
111 1lu9_A Methylene tetrahydromet 90.9 1.1 3.6E-05 43.5 9.9 82 280-375 63-152 (287)
112 2dpo_A L-gulonate 3-dehydrogen 90.8 0.095 3.3E-06 52.8 2.4 33 331-375 6-38 (319)
113 1omo_A Alanine dehydrogenase; 90.8 0.8 2.8E-05 45.8 9.2 112 316-457 112-229 (322)
114 4huj_A Uncharacterized protein 90.7 0.29 9.8E-06 45.8 5.5 93 332-450 24-117 (220)
115 1wwk_A Phosphoglycerate dehydr 90.7 1.2 4.3E-05 44.3 10.4 109 310-447 103-233 (307)
116 1up7_A 6-phospho-beta-glucosid 90.6 0.26 8.8E-06 51.7 5.5 124 332-472 3-164 (417)
117 3k5p_A D-3-phosphoglycerate de 90.6 3.6 0.00012 43.3 14.2 137 298-467 102-263 (416)
118 3gvi_A Malate dehydrogenase; N 90.6 0.22 7.6E-06 50.4 4.9 126 329-472 5-149 (324)
119 1smk_A Malate dehydrogenase, g 90.6 0.37 1.3E-05 48.3 6.5 104 332-449 9-128 (326)
120 3nep_X Malate dehydrogenase; h 90.6 0.18 6.3E-06 50.8 4.2 124 333-472 2-143 (314)
121 1xdw_A NAD+-dependent (R)-2-hy 90.5 1.7 5.9E-05 43.7 11.4 119 298-447 91-235 (331)
122 1guz_A Malate dehydrogenase; o 90.3 0.31 1.1E-05 48.4 5.6 100 333-449 2-121 (310)
123 3jtm_A Formate dehydrogenase, 90.3 1.7 5.7E-05 44.5 11.1 174 298-502 108-309 (351)
124 3p7m_A Malate dehydrogenase; p 90.3 0.2 6.9E-06 50.6 4.2 126 330-472 4-147 (321)
125 1qp8_A Formate dehydrogenase; 90.2 2.6 8.9E-05 42.0 12.2 117 298-447 71-211 (303)
126 2raf_A Putative dinucleotide-b 90.0 0.7 2.4E-05 43.0 7.4 37 327-375 15-51 (209)
127 1z82_A Glycerol-3-phosphate de 89.9 0.33 1.1E-05 48.0 5.5 98 331-451 14-116 (335)
128 2cuk_A Glycerate dehydrogenase 89.8 2.1 7.3E-05 42.7 11.2 117 298-448 87-231 (311)
129 3pqe_A L-LDH, L-lactate dehydr 89.7 0.22 7.4E-06 50.6 4.0 127 331-473 5-148 (326)
130 3ado_A Lambda-crystallin; L-gu 89.6 0.41 1.4E-05 48.6 5.9 33 331-375 6-38 (319)
131 2d4a_B Malate dehydrogenase; a 89.6 0.25 8.4E-06 49.4 4.3 118 333-472 1-141 (308)
132 3i83_A 2-dehydropantoate 2-red 89.6 0.51 1.7E-05 46.6 6.5 102 332-450 3-109 (320)
133 3tl2_A Malate dehydrogenase; c 89.6 0.29 9.8E-06 49.4 4.7 127 329-472 6-152 (315)
134 3phh_A Shikimate dehydrogenase 89.5 0.94 3.2E-05 44.9 8.3 100 316-448 107-212 (269)
135 3gt0_A Pyrroline-5-carboxylate 89.4 0.72 2.5E-05 43.6 7.2 98 332-450 3-101 (247)
136 3h8v_A Ubiquitin-like modifier 89.3 0.38 1.3E-05 48.2 5.4 39 327-376 32-70 (292)
137 2j6i_A Formate dehydrogenase; 89.3 1.4 4.8E-05 45.1 9.7 124 299-448 109-259 (364)
138 1sc6_A PGDH, D-3-phosphoglycer 89.3 4.2 0.00015 42.3 13.4 119 298-447 91-234 (404)
139 4dgs_A Dehydrogenase; structur 89.2 2.1 7.2E-05 43.6 10.9 120 310-461 130-273 (340)
140 2zyd_A 6-phosphogluconate dehy 89.1 0.78 2.7E-05 48.6 7.8 101 329-449 13-116 (480)
141 3k96_A Glycerol-3-phosphate de 89.0 0.61 2.1E-05 47.5 6.7 100 331-450 29-137 (356)
142 1txg_A Glycerol-3-phosphate de 88.8 0.73 2.5E-05 44.8 6.9 94 333-449 2-107 (335)
143 1x0v_A GPD-C, GPDH-C, glycerol 88.8 0.86 3E-05 44.9 7.5 111 331-450 8-128 (354)
144 2d0i_A Dehydrogenase; structur 88.8 2.6 9E-05 42.4 11.2 91 327-447 142-236 (333)
145 4e21_A 6-phosphogluconate dehy 88.7 1.4 4.9E-05 44.9 9.2 96 329-449 20-118 (358)
146 3rui_A Ubiquitin-like modifier 88.6 0.27 9.3E-06 50.5 3.8 38 328-376 31-68 (340)
147 1j4a_A D-LDH, D-lactate dehydr 88.5 4.6 0.00016 40.6 12.7 122 298-449 92-238 (333)
148 2ph5_A Homospermidine synthase 88.5 2.2 7.7E-05 45.8 10.8 99 330-447 12-115 (480)
149 1hye_A L-lactate/malate dehydr 88.5 0.66 2.3E-05 46.1 6.4 123 333-473 2-148 (313)
150 2yq5_A D-isomer specific 2-hyd 88.5 4.6 0.00016 41.2 12.8 120 298-448 92-238 (343)
151 3k6j_A Protein F01G10.3, confi 88.3 0.55 1.9E-05 50.0 6.1 32 332-375 55-86 (460)
152 1hyu_A AHPF, alkyl hydroperoxi 88.2 0.39 1.3E-05 50.7 4.8 100 261-375 134-244 (521)
153 4hy3_A Phosphoglycerate oxidor 88.2 1.5 5E-05 45.3 8.9 111 309-448 133-268 (365)
154 3hg7_A D-isomer specific 2-hyd 87.8 1.1 3.8E-05 45.4 7.6 110 310-448 103-232 (324)
155 1dxy_A D-2-hydroxyisocaproate 87.7 5.5 0.00019 40.1 12.7 120 298-448 90-235 (333)
156 4gsl_A Ubiquitin-like modifier 87.6 0.48 1.7E-05 52.3 5.2 38 328-376 323-360 (615)
157 3evt_A Phosphoglycerate dehydr 87.5 1.7 5.8E-05 43.9 8.8 122 298-448 83-229 (324)
158 1yj8_A Glycerol-3-phosphate de 87.5 0.72 2.5E-05 46.4 6.1 110 332-450 22-145 (375)
159 2x0j_A Malate dehydrogenase; o 87.5 0.79 2.7E-05 45.9 6.2 115 332-462 1-131 (294)
160 1f0y_A HCDH, L-3-hydroxyacyl-C 87.3 0.61 2.1E-05 45.4 5.3 32 332-375 16-47 (302)
161 3gvx_A Glycerate dehydrogenase 87.3 3.4 0.00012 41.2 10.7 90 327-448 118-211 (290)
162 2w2k_A D-mandelate dehydrogena 87.2 4.3 0.00015 41.0 11.6 96 326-447 158-257 (348)
163 1ks9_A KPA reductase;, 2-dehyd 87.2 1 3.5E-05 42.6 6.6 96 333-450 2-101 (291)
164 2p4q_A 6-phosphogluconate dehy 87.1 1.1 3.8E-05 47.7 7.5 98 332-449 11-112 (497)
165 1hdo_A Biliverdin IX beta redu 87.0 1.8 6E-05 38.2 7.6 98 331-446 3-111 (206)
166 1lss_A TRK system potassium up 86.9 0.76 2.6E-05 38.3 4.9 97 331-449 4-106 (140)
167 2pi1_A D-lactate dehydrogenase 86.8 3.6 0.00012 41.6 10.8 139 299-469 87-251 (334)
168 2qrj_A Saccharopine dehydrogen 86.8 2.4 8.4E-05 44.4 9.7 82 331-446 214-300 (394)
169 1y7t_A Malate dehydrogenase; N 86.8 0.48 1.6E-05 47.0 4.2 110 332-449 5-133 (327)
170 1npy_A Hypothetical shikimate 86.7 0.76 2.6E-05 45.2 5.6 48 316-375 105-152 (271)
171 3b1f_A Putative prephenate deh 86.7 1.1 3.7E-05 43.0 6.6 96 331-448 6-103 (290)
172 3vh1_A Ubiquitin-like modifier 86.5 0.56 1.9E-05 51.6 4.9 38 327-375 323-360 (598)
173 2izz_A Pyrroline-5-carboxylate 86.4 1.3 4.3E-05 43.9 7.0 101 330-450 21-122 (322)
174 3c85_A Putative glutathione-re 86.4 0.24 8.3E-06 44.4 1.7 102 328-447 36-140 (183)
175 2ew2_A 2-dehydropantoate 2-red 85.8 0.41 1.4E-05 45.8 3.0 101 332-450 4-112 (316)
176 2nac_A NAD-dependent formate d 85.7 3 0.0001 43.4 9.7 95 326-447 186-284 (393)
177 1jay_A Coenzyme F420H2:NADP+ o 85.6 0.43 1.5E-05 43.5 3.0 94 333-450 2-101 (212)
178 3abi_A Putative uncharacterize 85.6 0.57 1.9E-05 47.2 4.1 117 332-478 17-137 (365)
179 1gdh_A D-glycerate dehydrogena 85.5 3.4 0.00012 41.4 9.7 122 298-447 89-239 (320)
180 4aj2_A L-lactate dehydrogenase 85.3 0.46 1.6E-05 48.4 3.3 130 328-474 16-163 (331)
181 3ic5_A Putative saccharopine d 85.2 0.44 1.5E-05 38.6 2.5 84 331-436 5-92 (118)
182 3fi9_A Malate dehydrogenase; s 85.1 0.51 1.7E-05 48.2 3.5 107 329-449 6-129 (343)
183 4ina_A Saccharopine dehydrogen 85.0 1.3 4.3E-05 45.7 6.5 96 332-447 2-108 (405)
184 3gg9_A D-3-phosphoglycerate de 85.0 3.4 0.00011 42.2 9.5 108 326-461 155-266 (352)
185 3pp8_A Glyoxylate/hydroxypyruv 85.0 2.1 7.2E-05 43.0 7.9 123 298-449 86-232 (315)
186 3lk7_A UDP-N-acetylmuramoylala 84.4 1.2 4.2E-05 46.2 6.1 120 328-485 6-125 (451)
187 3ldh_A Lactate dehydrogenase; 84.3 0.51 1.7E-05 48.2 3.1 124 331-472 21-163 (330)
188 1y8q_A Ubiquitin-like 1 activa 84.2 0.76 2.6E-05 46.7 4.3 37 328-375 33-69 (346)
189 4fgw_A Glycerol-3-phosphate de 84.2 1.6 5.3E-05 45.6 6.7 97 332-437 35-141 (391)
190 2uyy_A N-PAC protein; long-cha 84.2 1.5 5E-05 42.8 6.2 92 332-448 31-126 (316)
191 5mdh_A Malate dehydrogenase; o 84.2 0.46 1.6E-05 48.2 2.7 130 332-473 4-155 (333)
192 3l6d_A Putative oxidoreductase 84.0 1.2 4E-05 43.8 5.5 94 328-447 6-102 (306)
193 3e8x_A Putative NAD-dependent 83.9 2.3 7.8E-05 39.0 7.1 101 327-447 17-132 (236)
194 2g76_A 3-PGDH, D-3-phosphoglyc 83.8 4.4 0.00015 41.1 9.7 119 299-447 112-256 (335)
195 2z2v_A Hypothetical protein PH 83.8 0.61 2.1E-05 47.6 3.4 120 330-478 15-137 (365)
196 3vrd_B FCCB subunit, flavocyto 83.8 1.1 3.9E-05 44.5 5.3 35 331-375 2-36 (401)
197 4dll_A 2-hydroxy-3-oxopropiona 83.8 0.89 3.1E-05 45.0 4.5 93 329-447 29-125 (320)
198 2h78_A Hibadh, 3-hydroxyisobut 83.6 1 3.5E-05 43.6 4.7 90 332-447 4-98 (302)
199 2vns_A Metalloreductase steap3 83.6 0.99 3.4E-05 42.1 4.5 94 329-450 26-119 (215)
200 2dq4_A L-threonine 3-dehydroge 83.5 1.9 6.6E-05 42.5 6.8 137 308-471 143-286 (343)
201 1pgj_A 6PGDH, 6-PGDH, 6-phosph 83.3 1.4 4.9E-05 46.5 6.1 97 333-449 3-106 (478)
202 3c24_A Putative oxidoreductase 83.2 1.9 6.5E-05 41.5 6.5 91 332-449 12-104 (286)
203 1id1_A Putative potassium chan 83.1 0.96 3.3E-05 39.4 4.0 34 330-375 2-35 (153)
204 3pef_A 6-phosphogluconate dehy 82.8 1.6 5.3E-05 42.1 5.7 91 332-447 2-96 (287)
205 4ezb_A Uncharacterized conserv 82.7 1.7 5.8E-05 43.1 6.1 33 332-375 25-57 (317)
206 3ip1_A Alcohol dehydrogenase, 82.7 6.9 0.00024 39.6 10.7 128 319-471 201-341 (404)
207 3qsg_A NAD-binding phosphogluc 82.5 5.3 0.00018 39.3 9.5 93 331-447 24-118 (312)
208 4gwg_A 6-phosphogluconate dehy 82.2 3 0.0001 44.5 8.1 98 332-449 5-106 (484)
209 4egb_A DTDP-glucose 4,6-dehydr 82.1 4.1 0.00014 39.3 8.4 106 329-446 22-149 (346)
210 1mx3_A CTBP1, C-terminal bindi 81.9 6.1 0.00021 40.2 10.0 168 298-500 107-311 (347)
211 4e5n_A Thermostable phosphite 81.8 4.5 0.00015 40.8 8.8 140 299-468 90-256 (330)
212 3ggo_A Prephenate dehydrogenas 81.7 3.6 0.00012 40.8 8.0 94 331-446 33-128 (314)
213 2g5c_A Prephenate dehydrogenas 81.6 3.1 0.00011 39.6 7.3 97 332-449 2-99 (281)
214 2iz1_A 6-phosphogluconate dehy 81.3 3.3 0.00011 43.5 8.0 99 331-449 5-106 (474)
215 3pdu_A 3-hydroxyisobutyrate de 81.2 1.9 6.5E-05 41.5 5.6 32 332-375 2-33 (287)
216 4hb9_A Similarities with proba 81.1 1.3 4.4E-05 43.3 4.4 32 332-375 2-33 (412)
217 1yb4_A Tartronic semialdehyde 81.0 2.1 7.1E-05 40.9 5.8 91 332-448 4-98 (295)
218 3cky_A 2-hydroxymethyl glutara 80.8 1.4 4.7E-05 42.4 4.5 92 332-449 5-101 (301)
219 3r6d_A NAD-dependent epimerase 80.7 1.2 3.9E-05 40.6 3.7 96 332-446 6-108 (221)
220 3doj_A AT3G25530, dehydrogenas 80.6 2.9 9.8E-05 41.0 6.8 36 328-375 18-53 (310)
221 3gpi_A NAD-dependent epimerase 80.4 1.5 5.2E-05 41.4 4.6 96 330-446 2-109 (286)
222 3hhp_A Malate dehydrogenase; M 80.3 1.9 6.7E-05 43.3 5.5 123 333-472 2-147 (312)
223 3ghy_A Ketopantoate reductase 80.2 1.1 3.6E-05 44.6 3.5 102 331-449 3-107 (335)
224 2pgd_A 6-phosphogluconate dehy 79.7 3.4 0.00012 43.5 7.5 98 332-449 3-104 (482)
225 3i6i_A Putative leucoanthocyan 79.2 1 3.5E-05 44.0 3.0 101 328-443 7-117 (346)
226 3d1c_A Flavin-containing putat 79.2 1.6 5.5E-05 42.3 4.4 35 331-376 4-38 (369)
227 4a9w_A Monooxygenase; baeyer-v 79.2 1.5 5.1E-05 41.8 4.1 34 331-376 3-36 (357)
228 3dhn_A NAD-dependent epimerase 79.1 2.8 9.5E-05 37.9 5.7 96 332-446 5-112 (227)
229 3fwz_A Inner membrane protein 79.0 1.1 3.7E-05 38.7 2.8 32 332-375 8-39 (140)
230 1tt5_B Ubiquitin-activating en 78.5 1.3 4.5E-05 46.6 3.8 38 327-375 36-73 (434)
231 3fbs_A Oxidoreductase; structu 78.2 1.9 6.6E-05 40.0 4.5 32 332-375 3-34 (297)
232 3hn2_A 2-dehydropantoate 2-red 77.8 1.8 6.3E-05 42.4 4.4 101 332-450 3-107 (312)
233 3ef6_A Toluene 1,2-dioxygenase 77.7 3.6 0.00012 41.6 6.6 38 332-379 3-40 (410)
234 2pv7_A T-protein [includes: ch 77.7 5.7 0.0002 38.7 7.9 32 332-375 22-54 (298)
235 3oz2_A Digeranylgeranylglycero 77.7 1.8 6.1E-05 41.8 4.2 31 333-375 6-36 (397)
236 1yqd_A Sinapyl alcohol dehydro 77.4 6.5 0.00022 39.3 8.3 131 314-471 171-305 (366)
237 1vpd_A Tartronate semialdehyde 77.3 1.7 5.8E-05 41.7 3.9 32 332-375 6-37 (299)
238 3f8d_A Thioredoxin reductase ( 77.2 2.1 7.4E-05 40.1 4.5 33 331-375 15-47 (323)
239 2f1k_A Prephenate dehydrogenas 77.1 4.7 0.00016 38.3 6.9 31 333-375 2-32 (279)
240 3qha_A Putative oxidoreductase 77.1 3.1 0.00011 40.5 5.7 91 331-447 15-106 (296)
241 3l4b_C TRKA K+ channel protien 77.0 1.2 4.2E-05 41.0 2.7 95 333-447 2-100 (218)
242 2zbw_A Thioredoxin reductase; 76.9 2.1 7.3E-05 40.9 4.5 34 331-376 5-38 (335)
243 1y8q_B Anthracycline-, ubiquit 76.9 1.6 5.6E-05 48.3 4.1 37 328-375 14-50 (640)
244 1bg6_A N-(1-D-carboxylethyl)-L 76.9 2.5 8.6E-05 41.3 5.1 93 332-447 5-110 (359)
245 3lzw_A Ferredoxin--NADP reduct 76.7 2.2 7.5E-05 40.4 4.4 33 331-375 7-39 (332)
246 3fg2_P Putative rubredoxin red 76.6 2.2 7.4E-05 43.0 4.6 35 332-376 2-36 (404)
247 3kb6_A D-lactate dehydrogenase 76.5 18 0.0006 36.6 11.3 111 326-470 136-252 (334)
248 2pzm_A Putative nucleotide sug 76.5 5.1 0.00018 38.7 7.1 103 327-446 16-136 (330)
249 2x5o_A UDP-N-acetylmuramoylala 76.5 11 0.00038 38.8 10.0 114 329-484 3-116 (439)
250 2bka_A CC3, TAT-interacting pr 76.3 7.9 0.00027 35.2 8.0 102 329-446 16-132 (242)
251 4id9_A Short-chain dehydrogena 76.1 5.8 0.0002 38.2 7.4 96 327-446 15-126 (347)
252 1i36_A Conserved hypothetical 76.0 4.5 0.00015 38.1 6.4 20 333-352 2-21 (264)
253 3alj_A 2-methyl-3-hydroxypyrid 75.8 2.4 8E-05 42.0 4.6 38 328-377 8-45 (379)
254 1zej_A HBD-9, 3-hydroxyacyl-CO 75.4 2.4 8.3E-05 42.2 4.5 31 331-374 12-42 (293)
255 4b4u_A Bifunctional protein fo 75.3 7 0.00024 39.7 7.9 92 310-445 158-250 (303)
256 3klj_A NAD(FAD)-dependent dehy 74.9 2.9 9.8E-05 42.4 5.0 38 330-379 8-45 (385)
257 3itj_A Thioredoxin reductase 1 74.9 2 6.9E-05 40.7 3.6 33 331-375 22-54 (338)
258 2q1w_A Putative nucleotide sug 74.8 8.8 0.0003 37.1 8.3 104 328-446 18-137 (333)
259 3lxd_A FAD-dependent pyridine 74.7 2.6 9E-05 42.4 4.7 38 330-377 8-45 (415)
260 3uko_A Alcohol dehydrogenase c 74.7 4.7 0.00016 40.3 6.5 77 327-421 190-273 (378)
261 2cvz_A Dehydrogenase, 3-hydrox 74.6 2.4 8.2E-05 40.2 4.1 90 333-449 3-93 (289)
262 2q7v_A Thioredoxin reductase; 74.5 2.5 8.6E-05 40.4 4.3 33 331-375 8-40 (325)
263 3slg_A PBGP3 protein; structur 73.9 13 0.00046 36.1 9.4 101 328-446 21-141 (372)
264 3nix_A Flavoprotein/dehydrogen 73.9 3.8 0.00013 40.6 5.5 35 331-377 5-39 (421)
265 3hyw_A Sulfide-quinone reducta 73.8 2.3 7.9E-05 43.4 4.0 34 332-375 3-36 (430)
266 3cgv_A Geranylgeranyl reductas 73.7 2.5 8.5E-05 41.3 4.1 35 330-376 3-37 (397)
267 3rp8_A Flavoprotein monooxygen 73.6 3 0.0001 41.6 4.7 36 329-376 21-56 (407)
268 3hwr_A 2-dehydropantoate 2-red 73.6 2.1 7.3E-05 42.2 3.6 99 328-451 16-125 (318)
269 2ywl_A Thioredoxin reductase r 73.4 3.3 0.00011 36.3 4.5 32 332-375 2-33 (180)
270 3dme_A Conserved exported prot 73.3 3.1 0.0001 39.9 4.5 33 331-375 4-36 (369)
271 2yjz_A Metalloreductase steap4 75.5 0.71 2.4E-05 43.1 0.0 92 329-449 17-108 (201)
272 3cty_A Thioredoxin reductase; 73.1 3 0.0001 39.7 4.5 33 331-375 16-48 (319)
273 3pdi_B Nitrogenase MOFE cofact 73.1 3 0.0001 43.9 4.8 88 327-442 309-397 (458)
274 1ryi_A Glycine oxidase; flavop 73.1 2.9 9.9E-05 40.8 4.4 35 331-377 17-51 (382)
275 2xdo_A TETX2 protein; tetracyc 72.9 2.9 9.9E-05 41.7 4.4 36 329-376 24-59 (398)
276 3h8l_A NADH oxidase; membrane 72.9 3.1 0.00011 41.7 4.6 36 332-376 2-37 (409)
277 1ygy_A PGDH, D-3-phosphoglycer 72.7 12 0.00042 39.9 9.4 119 299-446 89-232 (529)
278 3axb_A Putative oxidoreductase 72.5 3.5 0.00012 41.6 5.0 37 327-374 19-55 (448)
279 2vou_A 2,6-dihydroxypyridine h 72.5 3.5 0.00012 41.1 4.9 35 330-376 4-38 (397)
280 3ab1_A Ferredoxin--NADP reduct 72.5 3.2 0.00011 40.4 4.5 34 331-376 14-47 (360)
281 2x3n_A Probable FAD-dependent 72.3 3 0.0001 41.3 4.4 35 331-377 6-40 (399)
282 3m2p_A UDP-N-acetylglucosamine 72.2 10 0.00034 36.1 7.9 93 332-446 3-109 (311)
283 3s2u_A UDP-N-acetylglucosamine 72.2 4.4 0.00015 40.4 5.5 40 404-447 85-124 (365)
284 2jae_A L-amino acid oxidase; o 72.1 2.7 9.2E-05 43.0 4.0 41 325-377 5-45 (489)
285 3r9u_A Thioredoxin reductase; 72.1 3.3 0.00011 38.8 4.3 33 331-375 4-37 (315)
286 3k7m_X 6-hydroxy-L-nicotine ox 72.1 3.4 0.00012 41.2 4.7 31 333-375 3-33 (431)
287 2ahr_A Putative pyrroline carb 72.0 2.9 9.9E-05 39.4 3.9 32 332-375 4-35 (259)
288 1yvv_A Amine oxidase, flavin-c 71.8 3.1 0.0001 39.7 4.1 33 332-376 3-35 (336)
289 2z1m_A GDP-D-mannose dehydrata 71.5 7.3 0.00025 37.1 6.7 101 330-446 2-127 (345)
290 2gag_B Heterotetrameric sarcos 71.4 3.9 0.00013 40.1 4.9 35 331-376 21-56 (405)
291 3g0o_A 3-hydroxyisobutyrate de 71.2 2.5 8.5E-05 41.2 3.4 33 331-375 7-39 (303)
292 1y56_B Sarcosine oxidase; dehy 71.2 3.3 0.00011 40.5 4.3 34 331-376 5-38 (382)
293 3nrc_A Enoyl-[acyl-carrier-pro 71.1 6.6 0.00023 37.4 6.3 78 328-422 23-114 (280)
294 2q0l_A TRXR, thioredoxin reduc 70.8 3.6 0.00012 38.8 4.4 33 332-375 2-34 (311)
295 4eqs_A Coenzyme A disulfide re 70.6 3.2 0.00011 42.6 4.2 34 333-376 2-35 (437)
296 2gf3_A MSOX, monomeric sarcosi 70.2 3.7 0.00013 40.0 4.4 35 331-377 3-37 (389)
297 3c96_A Flavin-containing monoo 70.0 4 0.00014 40.8 4.7 35 331-376 4-38 (410)
298 4b8w_A GDP-L-fucose synthase; 70.0 6.7 0.00023 36.6 5.9 92 328-446 3-113 (319)
299 3e48_A Putative nucleoside-dip 70.0 7.2 0.00025 36.6 6.2 97 333-446 2-106 (289)
300 1k0i_A P-hydroxybenzoate hydro 69.8 4.2 0.00014 40.1 4.7 33 332-376 3-35 (394)
301 1np3_A Ketol-acid reductoisome 69.7 6 0.00021 39.5 5.9 88 329-443 14-104 (338)
302 2uzz_A N-methyl-L-tryptophan o 69.7 3.8 0.00013 39.8 4.3 35 332-378 3-37 (372)
303 1trb_A Thioredoxin reductase; 69.6 2.7 9.3E-05 39.8 3.2 34 330-375 4-37 (320)
304 3llv_A Exopolyphosphatase-rela 69.5 4.4 0.00015 34.4 4.2 34 330-375 5-38 (141)
305 4ej6_A Putative zinc-binding d 69.4 12 0.00042 37.3 8.1 137 305-471 158-309 (370)
306 2vdc_G Glutamate synthase [NAD 69.2 4.3 0.00015 42.3 4.9 35 330-376 121-155 (456)
307 1tt5_A APPBP1, amyloid protein 69.2 2.4 8.1E-05 45.8 3.0 38 327-375 28-65 (531)
308 1zk7_A HGII, reductase, mercur 69.2 4.2 0.00014 41.7 4.7 33 331-375 4-36 (467)
309 3dje_A Fructosyl amine: oxygen 69.0 4.2 0.00014 40.8 4.6 37 331-378 6-42 (438)
310 3ehe_A UDP-glucose 4-epimerase 69.0 15 0.00051 34.8 8.3 95 333-446 3-114 (313)
311 2nvu_B Maltose binding protein 68.9 3.5 0.00012 45.9 4.4 37 329-376 409-445 (805)
312 2oln_A NIKD protein; flavoprot 68.7 4.4 0.00015 40.0 4.6 36 331-378 4-39 (397)
313 2xve_A Flavin-containing monoo 68.6 4 0.00014 42.2 4.5 39 332-376 3-41 (464)
314 1vdc_A NTR, NADPH dependent th 68.6 3.4 0.00012 39.4 3.7 33 330-374 7-39 (333)
315 2gqw_A Ferredoxin reductase; f 68.6 6.1 0.00021 39.9 5.7 39 331-379 7-45 (408)
316 3iwa_A FAD-dependent pyridine 68.5 3.7 0.00013 42.1 4.2 37 331-377 3-39 (472)
317 1c0p_A D-amino acid oxidase; a 68.3 5 0.00017 39.1 4.9 34 331-376 6-39 (363)
318 7mdh_A Protein (malate dehydro 68.3 3.8 0.00013 42.5 4.2 109 331-449 32-161 (375)
319 1n2s_A DTDP-4-, DTDP-glucose o 68.1 5.6 0.00019 37.4 5.0 86 333-446 2-104 (299)
320 3i3l_A Alkylhalidase CMLS; fla 68.0 6.2 0.00021 42.7 5.9 37 329-377 21-57 (591)
321 2gv8_A Monooxygenase; FMO, FAD 67.9 3.9 0.00013 41.7 4.1 37 330-376 5-41 (447)
322 3s5w_A L-ornithine 5-monooxyge 67.6 3.7 0.00012 41.7 3.8 40 331-377 30-69 (463)
323 1pqw_A Polyketide synthase; ro 67.5 13 0.00045 33.2 7.1 50 314-375 22-72 (198)
324 3ka7_A Oxidoreductase; structu 67.3 5 0.00017 39.8 4.7 31 333-375 2-32 (425)
325 2yy7_A L-threonine dehydrogena 67.1 5.9 0.0002 37.4 5.0 98 332-445 3-117 (312)
326 4gcm_A TRXR, thioredoxin reduc 67.0 4.7 0.00016 38.4 4.3 32 332-375 7-38 (312)
327 3ek2_A Enoyl-(acyl-carrier-pro 66.9 5.9 0.0002 36.9 4.9 38 326-375 9-49 (271)
328 3urh_A Dihydrolipoyl dehydroge 66.9 4.6 0.00016 41.7 4.5 34 331-376 25-58 (491)
329 1dxl_A Dihydrolipoamide dehydr 66.8 5.4 0.00019 40.7 5.0 34 331-376 6-39 (470)
330 3ew7_A LMO0794 protein; Q8Y8U8 66.8 19 0.00064 31.9 8.0 91 333-446 2-103 (221)
331 3uox_A Otemo; baeyer-villiger 66.7 4.9 0.00017 42.8 4.8 35 330-376 8-42 (545)
332 2c20_A UDP-glucose 4-epimerase 66.6 12 0.0004 35.7 7.0 99 332-446 2-118 (330)
333 2r9z_A Glutathione amide reduc 66.5 4.9 0.00017 41.4 4.6 33 331-375 4-36 (463)
334 1e6u_A GDP-fucose synthetase; 66.4 6.7 0.00023 37.3 5.2 87 331-446 3-107 (321)
335 2gf2_A Hibadh, 3-hydroxyisobut 66.4 7.1 0.00024 37.2 5.4 31 333-375 2-32 (296)
336 2d8a_A PH0655, probable L-thre 66.3 5.4 0.00018 39.4 4.7 138 308-471 147-291 (348)
337 2x4g_A Nucleoside-diphosphate- 66.3 14 0.00047 35.3 7.4 97 332-446 14-126 (342)
338 2eq6_A Pyruvate dehydrogenase 66.2 4.6 0.00016 41.5 4.3 35 330-376 5-39 (464)
339 2zcu_A Uncharacterized oxidore 66.1 5.3 0.00018 37.2 4.4 98 333-446 1-104 (286)
340 3nrn_A Uncharacterized protein 66.1 5.3 0.00018 39.9 4.6 31 333-375 2-32 (421)
341 3gg2_A Sugar dehydrogenase, UD 66.1 5.6 0.00019 41.7 5.0 32 332-375 3-34 (450)
342 3cgb_A Pyridine nucleotide-dis 65.9 4.3 0.00015 42.0 4.0 65 304-378 6-73 (480)
343 2hqm_A GR, grase, glutathione 65.8 4.8 0.00017 41.6 4.4 35 330-376 10-44 (479)
344 2cul_A Glucose-inhibited divis 65.4 5.5 0.00019 36.9 4.3 33 331-375 3-35 (232)
345 4ap3_A Steroid monooxygenase; 65.4 4.9 0.00017 42.9 4.5 35 330-376 20-54 (549)
346 3v76_A Flavoprotein; structura 65.4 4.7 0.00016 41.5 4.2 35 331-377 27-61 (417)
347 2a87_A TRXR, TR, thioredoxin r 65.3 4.5 0.00015 39.0 3.8 34 330-375 13-46 (335)
348 2wm3_A NMRA-like family domain 65.2 3 0.0001 39.6 2.5 99 331-447 5-115 (299)
349 2qae_A Lipoamide, dihydrolipoy 65.2 5.4 0.00019 40.9 4.6 34 331-376 2-35 (468)
350 3pid_A UDP-glucose 6-dehydroge 65.2 7.3 0.00025 41.1 5.6 40 323-375 28-67 (432)
351 1wdk_A Fatty oxidation complex 64.9 7.6 0.00026 43.2 6.0 34 330-375 313-346 (715)
352 1fl2_A Alkyl hydroperoxide red 64.7 5 0.00017 37.9 3.9 32 332-375 2-33 (310)
353 2c5a_A GDP-mannose-3', 5'-epim 64.6 23 0.00078 35.0 8.9 99 330-446 28-145 (379)
354 1pl8_A Human sorbitol dehydrog 64.5 11 0.00038 37.3 6.6 49 314-374 156-204 (356)
355 4gbj_A 6-phosphogluconate dehy 64.5 9.5 0.00032 37.5 6.0 96 332-456 6-105 (297)
356 2weu_A Tryptophan 5-halogenase 64.4 4.6 0.00016 41.7 3.9 37 332-377 3-39 (511)
357 2o7s_A DHQ-SDH PR, bifunctiona 64.4 7.9 0.00027 41.2 5.8 36 328-375 361-396 (523)
358 3ihm_A Styrene monooxygenase A 64.4 5.4 0.00018 40.6 4.4 32 332-375 23-54 (430)
359 3qvo_A NMRA family protein; st 64.3 10 0.00035 34.9 5.9 101 329-446 21-125 (236)
360 2a8x_A Dihydrolipoyl dehydroge 64.2 5.3 0.00018 40.9 4.3 33 331-375 3-35 (464)
361 2yqu_A 2-oxoglutarate dehydrog 64.0 5.7 0.0002 40.5 4.5 33 332-376 2-34 (455)
362 1mo9_A ORF3; nucleotide bindin 64.0 5.3 0.00018 41.9 4.4 35 330-376 42-76 (523)
363 3grf_A Ornithine carbamoyltran 64.0 21 0.00073 36.3 8.7 137 262-417 90-240 (328)
364 2e4g_A Tryptophan halogenase; 64.0 5.8 0.0002 41.9 4.6 38 331-377 25-62 (550)
365 4gde_A UDP-galactopyranose mut 64.0 6.6 0.00023 39.9 4.9 23 331-353 10-32 (513)
366 3vtz_A Glucose 1-dehydrogenase 64.0 16 0.00054 34.7 7.4 78 326-422 9-92 (269)
367 2q1s_A Putative nucleotide sug 63.8 11 0.00039 37.0 6.5 103 328-446 29-151 (377)
368 2qa2_A CABE, polyketide oxygen 63.8 5.9 0.0002 41.5 4.6 34 330-375 11-44 (499)
369 4g6h_A Rotenone-insensitive NA 63.8 3.2 0.00011 43.7 2.7 32 332-375 43-74 (502)
370 2p5y_A UDP-glucose 4-epimerase 63.7 13 0.00043 35.3 6.6 98 333-446 2-117 (311)
371 3ntd_A FAD-dependent pyridine 63.7 6.9 0.00024 40.9 5.2 37 332-378 2-38 (565)
372 3cmm_A Ubiquitin-activating en 63.6 5.5 0.00019 46.4 4.7 38 327-375 23-60 (1015)
373 1m6i_A Programmed cell death p 63.6 6.9 0.00024 40.8 5.1 38 330-377 10-47 (493)
374 2aqj_A Tryptophan halogenase, 63.6 5.8 0.0002 41.6 4.6 37 331-376 5-41 (538)
375 3kd9_A Coenzyme A disulfide re 63.6 7.7 0.00026 39.5 5.4 37 331-377 3-39 (449)
376 1w4x_A Phenylacetone monooxyge 63.5 5.7 0.00019 41.9 4.5 35 330-376 15-49 (542)
377 3sx6_A Sulfide-quinone reducta 63.4 6.2 0.00021 40.1 4.6 36 332-376 5-40 (437)
378 2nu8_A Succinyl-COA ligase [AD 63.3 12 0.0004 36.9 6.4 86 331-442 7-93 (288)
379 4a5l_A Thioredoxin reductase; 63.3 4.9 0.00017 37.9 3.6 31 333-375 6-36 (314)
380 3qj4_A Renalase; FAD/NAD(P)-bi 63.2 3.9 0.00013 39.7 3.0 35 332-375 2-36 (342)
381 1zmd_A Dihydrolipoyl dehydroge 63.2 6 0.0002 40.6 4.5 34 331-376 6-39 (474)
382 1ges_A Glutathione reductase; 63.2 5 0.00017 41.1 3.9 33 331-375 4-36 (450)
383 3h28_A Sulfide-quinone reducta 63.0 5.9 0.0002 40.1 4.4 35 332-376 3-37 (430)
384 4ep1_A Otcase, ornithine carba 62.8 36 0.0012 35.0 10.1 127 272-420 124-256 (340)
385 2wpf_A Trypanothione reductase 62.7 8.1 0.00028 40.3 5.4 31 331-373 7-38 (495)
386 3ruf_A WBGU; rossmann fold, UD 62.7 5.7 0.0002 38.4 4.0 101 329-446 23-151 (351)
387 1q1r_A Putidaredoxin reductase 62.6 6.8 0.00023 40.0 4.7 37 331-377 4-40 (431)
388 3k30_A Histamine dehydrogenase 62.6 7.2 0.00024 42.6 5.2 34 331-376 391-424 (690)
389 2bc0_A NADH oxidase; flavoprot 62.6 6.8 0.00023 40.6 4.8 37 331-376 35-71 (490)
390 1ebd_A E3BD, dihydrolipoamide 62.5 5.4 0.00018 40.7 4.0 32 332-375 4-35 (455)
391 3m6i_A L-arabinitol 4-dehydrog 62.5 9.3 0.00032 37.8 5.6 58 305-374 155-212 (363)
392 3ec7_A Putative dehydrogenase; 62.5 4 0.00014 40.8 2.9 97 328-443 20-116 (357)
393 1dlj_A UDP-glucose dehydrogena 62.4 4.2 0.00014 41.8 3.1 30 333-375 2-31 (402)
394 2v3a_A Rubredoxin reductase; a 62.3 5.5 0.00019 39.6 3.9 35 331-375 4-38 (384)
395 4a2c_A Galactitol-1-phosphate 62.1 20 0.00069 34.9 7.9 56 307-374 138-193 (346)
396 4fk1_A Putative thioredoxin re 62.1 6.4 0.00022 37.6 4.2 33 331-375 6-38 (304)
397 2qa1_A PGAE, polyketide oxygen 62.1 6.1 0.00021 41.4 4.4 35 329-375 9-43 (500)
398 2bry_A NEDD9 interacting prote 62.0 6.8 0.00023 41.0 4.7 36 331-378 92-127 (497)
399 3dfz_A SIRC, precorrin-2 dehyd 61.9 5.8 0.0002 38.2 3.8 36 328-375 28-63 (223)
400 3gwf_A Cyclohexanone monooxyge 61.8 5.3 0.00018 42.5 3.9 36 330-376 7-42 (540)
401 1hdc_A 3-alpha, 20 beta-hydrox 61.7 8.5 0.00029 36.1 4.9 36 328-375 2-38 (254)
402 3dqp_A Oxidoreductase YLBE; al 61.7 14 0.00048 33.2 6.2 94 333-446 2-106 (219)
403 1onf_A GR, grase, glutathione 61.6 6.1 0.00021 41.1 4.3 33 332-376 3-35 (500)
404 2qcu_A Aerobic glycerol-3-phos 61.6 6.4 0.00022 41.0 4.4 34 331-376 3-36 (501)
405 3ics_A Coenzyme A-disulfide re 61.5 8.6 0.00029 40.7 5.4 39 330-378 35-73 (588)
406 3tzq_B Short-chain type dehydr 61.5 8.1 0.00028 36.6 4.8 77 327-422 7-96 (271)
407 1lvl_A Dihydrolipoamide dehydr 61.5 6.2 0.00021 40.5 4.3 33 331-375 5-37 (458)
408 1mv8_A GMD, GDP-mannose 6-dehy 61.4 5.6 0.00019 41.1 3.9 31 333-375 2-32 (436)
409 2dkn_A 3-alpha-hydroxysteroid 61.2 11 0.00037 34.3 5.5 68 333-422 3-73 (255)
410 1v59_A Dihydrolipoamide dehydr 61.1 6.9 0.00024 40.1 4.5 34 331-376 5-38 (478)
411 1uzm_A 3-oxoacyl-[acyl-carrier 61.1 20 0.00069 33.3 7.4 77 326-422 10-92 (247)
412 3c4a_A Probable tryptophan hyd 61.1 7 0.00024 38.7 4.4 21 333-353 2-22 (381)
413 3fpz_A Thiazole biosynthetic e 61.0 6.7 0.00023 38.0 4.2 37 329-375 63-99 (326)
414 3l8k_A Dihydrolipoyl dehydroge 60.8 7.2 0.00025 40.1 4.6 35 331-377 4-38 (466)
415 2q2v_A Beta-D-hydroxybutyrate 60.8 7.7 0.00026 36.2 4.4 35 329-375 2-37 (255)
416 3oc4_A Oxidoreductase, pyridin 60.7 7.5 0.00026 39.7 4.7 36 332-377 3-38 (452)
417 3o0h_A Glutathione reductase; 60.7 7.7 0.00026 40.1 4.8 33 331-375 26-58 (484)
418 3ktd_A Prephenate dehydrogenas 60.6 9.4 0.00032 38.7 5.3 91 332-446 9-101 (341)
419 3c4n_A Uncharacterized protein 60.6 7.6 0.00026 38.9 4.6 34 332-375 37-70 (405)
420 3ihg_A RDME; flavoenzyme, anth 60.5 6.1 0.00021 41.2 4.0 34 331-376 5-38 (535)
421 1rsg_A FMS1 protein; FAD bindi 60.4 7.3 0.00025 40.4 4.6 25 329-353 6-30 (516)
422 3g3e_A D-amino-acid oxidase; F 60.2 8.4 0.00029 37.4 4.7 37 333-375 2-38 (351)
423 3lad_A Dihydrolipoamide dehydr 60.1 8.2 0.00028 39.5 4.8 33 331-375 3-35 (476)
424 2zb4_A Prostaglandin reductase 59.8 18 0.0006 35.7 7.0 56 309-375 137-195 (357)
425 3e1t_A Halogenase; flavoprotei 59.8 5.7 0.0002 41.4 3.7 35 330-376 6-40 (512)
426 2cdu_A NADPH oxidase; flavoenz 59.8 7.6 0.00026 39.6 4.5 34 333-376 2-35 (452)
427 1s3e_A Amine oxidase [flavin-c 59.8 7.6 0.00026 40.2 4.6 35 331-377 4-38 (520)
428 1hxh_A 3BETA/17BETA-hydroxyste 59.7 6.1 0.00021 36.9 3.5 36 328-375 3-39 (253)
429 1nhp_A NADH peroxidase; oxidor 59.6 7.7 0.00026 39.4 4.5 35 333-377 2-36 (447)
430 2pyx_A Tryptophan halogenase; 59.6 7.1 0.00024 40.9 4.3 39 331-376 7-52 (526)
431 3uog_A Alcohol dehydrogenase; 59.4 8.7 0.0003 38.2 4.8 95 319-434 178-278 (363)
432 3sxp_A ADP-L-glycero-D-mannohe 59.0 20 0.00068 34.9 7.2 108 327-446 6-138 (362)
433 1sb8_A WBPP; epimerase, 4-epim 59.0 11 0.00037 36.6 5.3 101 329-446 25-153 (352)
434 3enk_A UDP-glucose 4-epimerase 58.9 9.6 0.00033 36.5 4.9 97 331-446 5-129 (341)
435 2cdc_A Glucose dehydrogenase g 58.9 25 0.00084 34.9 8.0 33 331-375 181-213 (366)
436 1xdi_A RV3303C-LPDA; reductase 58.7 7.2 0.00025 40.4 4.2 36 332-376 3-38 (499)
437 2e1m_A L-glutamate oxidase; L- 58.6 8.6 0.0003 39.5 4.7 35 329-375 42-76 (376)
438 1vl0_A DTDP-4-dehydrorhamnose 58.6 9 0.00031 35.9 4.5 88 328-446 9-113 (292)
439 1ojt_A Surface protein; redox- 58.5 8.4 0.00029 39.8 4.6 34 331-376 6-39 (482)
440 4dgk_A Phytoene dehydrogenase; 58.5 7 0.00024 39.8 4.0 22 332-353 2-23 (501)
441 2gqf_A Hypothetical protein HI 58.4 6.6 0.00022 40.0 3.7 35 331-377 4-38 (401)
442 1xq6_A Unknown protein; struct 58.4 11 0.00039 34.0 5.0 100 330-446 3-133 (253)
443 2vvm_A Monoamine oxidase N; FA 58.0 8.7 0.0003 39.2 4.6 22 332-353 40-61 (495)
444 2yg5_A Putrescine oxidase; oxi 57.8 8.4 0.00029 38.7 4.4 35 330-376 4-38 (453)
445 4eez_A Alcohol dehydrogenase 1 57.8 24 0.00081 34.4 7.5 47 316-374 150-196 (348)
446 3i6d_A Protoporphyrinogen oxid 57.8 8 0.00027 38.6 4.2 22 332-353 6-27 (470)
447 3nyc_A D-arginine dehydrogenas 57.7 6.1 0.00021 38.2 3.2 34 330-376 8-41 (381)
448 4b63_A L-ornithine N5 monooxyg 57.6 6.4 0.00022 41.3 3.6 22 333-354 41-62 (501)
449 1rp0_A ARA6, thiazole biosynth 57.5 8.9 0.0003 36.7 4.3 37 330-377 38-74 (284)
450 3sc6_A DTDP-4-dehydrorhamnose 57.5 6.7 0.00023 36.7 3.4 84 332-446 6-106 (287)
451 2i0z_A NAD(FAD)-utilizing dehy 57.4 7.9 0.00027 39.6 4.2 34 332-377 27-60 (447)
452 3dk9_A Grase, GR, glutathione 57.2 7.9 0.00027 39.7 4.1 34 330-375 19-52 (478)
453 3lov_A Protoporphyrinogen oxid 57.2 12 0.00042 37.8 5.5 36 331-376 4-39 (475)
454 2bi7_A UDP-galactopyranose mut 57.2 8.9 0.00031 38.7 4.5 34 331-376 3-36 (384)
455 2r0c_A REBC; flavin adenine di 57.1 7.8 0.00027 41.0 4.2 34 331-376 26-59 (549)
456 3n74_A 3-ketoacyl-(acyl-carrie 57.1 7.7 0.00026 36.1 3.7 77 327-422 5-94 (261)
457 3tpc_A Short chain alcohol deh 57.0 24 0.00082 32.8 7.1 36 328-375 4-40 (257)
458 3nks_A Protoporphyrinogen oxid 56.9 8 0.00027 39.0 4.1 34 332-375 3-36 (477)
459 3i1j_A Oxidoreductase, short c 56.9 23 0.0008 32.4 6.9 37 327-375 10-47 (247)
460 2jl1_A Triphenylmethane reduct 56.8 6.1 0.00021 36.9 2.9 98 333-446 2-107 (287)
461 1xhc_A NADH oxidase /nitrite r 56.6 6.2 0.00021 39.5 3.1 35 331-378 8-42 (367)
462 3k31_A Enoyl-(acyl-carrier-pro 56.5 14 0.00049 35.6 5.6 80 327-422 26-119 (296)
463 3atr_A Conserved archaeal prot 56.5 4.8 0.00017 41.0 2.4 34 331-376 6-39 (453)
464 2gn4_A FLAA1 protein, UDP-GLCN 56.4 8.9 0.0003 37.8 4.2 102 326-446 16-142 (344)
465 1fec_A Trypanothione reductase 56.3 12 0.0004 38.9 5.3 31 331-373 3-34 (490)
466 3oig_A Enoyl-[acyl-carrier-pro 55.8 19 0.00067 33.5 6.3 37 327-375 3-42 (266)
467 2i76_A Hypothetical protein; N 55.7 1.8 6.3E-05 41.6 -0.9 21 332-352 3-23 (276)
468 1e3j_A NADP(H)-dependent ketos 55.5 17 0.00057 35.8 6.0 54 308-374 147-200 (352)
469 3ko8_A NAD-dependent epimerase 55.5 35 0.0012 32.0 8.1 94 333-446 2-113 (312)
470 1o94_A Tmadh, trimethylamine d 55.4 9.5 0.00032 42.1 4.6 34 331-376 389-422 (729)
471 1piw_A Hypothetical zinc-type 55.4 32 0.0011 33.9 8.1 97 316-434 166-267 (360)
472 2iid_A L-amino-acid oxidase; f 55.3 12 0.00042 38.1 5.2 33 331-375 33-65 (498)
473 4gqa_A NAD binding oxidoreduct 55.3 8.1 0.00028 39.1 3.8 104 319-434 13-118 (412)
474 1o5i_A 3-oxoacyl-(acyl carrier 54.8 38 0.0013 31.5 8.1 76 327-422 15-92 (249)
475 4h7p_A Malate dehydrogenase; s 54.6 18 0.0006 37.0 6.2 115 328-449 21-153 (345)
476 1cjc_A Protein (adrenodoxin re 54.6 12 0.0004 38.9 5.0 35 331-375 6-40 (460)
477 2hcy_A Alcohol dehydrogenase 1 54.3 19 0.00066 35.3 6.3 44 318-374 158-202 (347)
478 3csu_A Protein (aspartate carb 54.3 1.1E+02 0.0039 30.7 12.0 135 262-420 88-230 (310)
479 2bcg_G Secretory pathway GDP d 54.3 9.7 0.00033 39.1 4.2 36 331-378 11-46 (453)
480 1f8f_A Benzyl alcohol dehydrog 54.2 25 0.00087 34.8 7.2 50 314-374 174-223 (371)
481 2ydy_A Methionine adenosyltran 54.1 23 0.00078 33.5 6.5 92 331-446 2-110 (315)
482 2b9w_A Putative aminooxidase; 54.0 11 0.00038 37.4 4.5 35 330-375 5-39 (424)
483 1kyq_A Met8P, siroheme biosynt 53.9 7.8 0.00027 38.4 3.3 36 328-375 10-45 (274)
484 1t2a_A GDP-mannose 4,6 dehydra 53.8 27 0.00092 34.1 7.2 101 332-446 25-156 (375)
485 3da1_A Glycerol-3-phosphate de 53.8 8.9 0.0003 40.9 4.0 33 331-375 18-50 (561)
486 3tpf_A Otcase, ornithine carba 53.8 69 0.0024 32.3 10.3 135 262-419 81-222 (307)
487 3l9w_A Glutathione-regulated p 53.8 7.3 0.00025 40.4 3.2 97 332-447 5-103 (413)
488 1y0p_A Fumarate reductase flav 53.7 12 0.00041 39.6 4.9 40 327-378 122-161 (571)
489 1kol_A Formaldehyde dehydrogen 53.7 23 0.0008 35.4 6.9 48 315-374 171-218 (398)
490 2rgh_A Alpha-glycerophosphate 53.7 10 0.00036 40.5 4.5 34 331-376 32-65 (571)
491 1gte_A Dihydropyrimidine dehyd 53.6 9.8 0.00034 43.8 4.5 34 331-375 187-220 (1025)
492 4dna_A Probable glutathione re 53.6 10 0.00035 38.8 4.3 33 331-375 5-37 (463)
493 3st7_A Capsular polysaccharide 53.4 28 0.00095 34.1 7.2 79 333-446 2-94 (369)
494 3p19_A BFPVVD8, putative blue 53.2 13 0.00046 35.2 4.8 80 326-421 11-97 (266)
495 3cmm_A Ubiquitin-activating en 53.0 9.3 0.00032 44.5 4.2 42 328-375 422-463 (1015)
496 1rkx_A CDP-glucose-4,6-dehydra 52.9 24 0.00083 34.0 6.6 102 329-446 7-132 (357)
497 2cf5_A Atccad5, CAD, cinnamyl 52.9 29 0.00099 34.3 7.3 46 317-374 167-212 (357)
498 1ek6_A UDP-galactose 4-epimera 52.7 10 0.00035 36.4 3.9 103 332-446 3-132 (348)
499 2ivd_A PPO, PPOX, protoporphyr 52.7 9.3 0.00032 38.7 3.7 33 331-375 16-48 (478)
500 4fs3_A Enoyl-[acyl-carrier-pro 52.6 13 0.00046 35.1 4.7 36 328-375 3-41 (256)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=8.8e-190 Score=1506.30 Aligned_cols=468 Identities=55% Similarity=0.970 Sum_probs=462.2
Q ss_pred cccccccccCCCCCCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHHhhhh
Q 010044 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (519)
Q Consensus 50 ~~G~~ll~~p~~NkG~aFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (519)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.|+++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccchHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCccccchh
Q 010044 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (519)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (519)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||||++||+||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH
Q 010044 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (519)
Q Consensus 210 Kl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a 289 (519)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcE
Q 010044 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (519)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i 369 (519)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||++||
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 370 ~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||+|||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 49999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcccCCcEEEEcCCCCCcccc-CCEEecccCccceeechhhhHHHHHhCCcccChhhhhcC
Q 010044 450 SQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA 519 (519)
Q Consensus 450 ~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aA 519 (519)
+++||+||||++||+|+|||||||||+||+| +||+|+|||+||+|+|||||||+++++|++|||+|++||
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aA 469 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTT 469 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHH
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999986
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=3.4e-189 Score=1505.41 Aligned_cols=469 Identities=52% Similarity=0.959 Sum_probs=462.5
Q ss_pred cccccccccCCCCCCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHHhhhh
Q 010044 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (519)
Q Consensus 50 ~~G~~ll~~p~~NkG~aFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (519)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccchHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCccccchh
Q 010044 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (519)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (519)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+++|+++|+|||.++|+|||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH
Q 010044 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (519)
Q Consensus 210 Kl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a 289 (519)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcE
Q 010044 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (519)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i 369 (519)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||++||
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999885 99999999999
Q ss_pred EEEecCCccccCCccCCchhchhhccccCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 370 ~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
||||++|||+++|.++|+++|++||++.++. ++|+|||+++|||||||+|+++|+||+|||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999435999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhcccCCcEEEEcCCCCCcccc-CCEEecccCccceeechhhhHHHHHhCCcccChhhhhcC
Q 010044 448 PTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA 519 (519)
Q Consensus 448 Pt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aA 519 (519)
||+++||+||||++||+|+|||||||||+||+| +||+|+|||+||+|+|||||||+++++|++|||+|++||
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aA 474 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEA 474 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHH
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999999999999999999986
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=3.8e-189 Score=1509.44 Aligned_cols=472 Identities=50% Similarity=0.890 Sum_probs=465.1
Q ss_pred cccccccccccccCCCCCCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHH
Q 010044 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYK 125 (519)
Q Consensus 46 ~~~~~~G~~ll~~p~~NkG~aFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ 125 (519)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccCCcccccchHHHHHHHhhhhcCCCccccccccc--chHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCc
Q 010044 126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 203 (519)
Q Consensus 126 ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 203 (519)
++++|++|+|||+||||||++|++||+|||+|+|+|+|++|+ |+++++++|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeec
Q 010044 204 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 283 (519)
Q Consensus 204 mgI~iGKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIqfED 283 (519)
|+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChh
Q 010044 284 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 363 (519)
Q Consensus 284 f~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~e 363 (519)
|++||||+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999885 99999
Q ss_pred hhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 010044 364 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (519)
Q Consensus 364 eA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (519)
||++||||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||+|||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 49999999999877778999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEEecccCccceeechhhhHHHHHhCCcccChhhhhcC
Q 010044 444 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA 519 (519)
Q Consensus 444 aLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aA 519 (519)
||||||+++||+||||++||+|+|||||||||+||+|+||+|+|||+||+|+|||||||+++++|++|||+|++||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aA 506 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLA 506 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=9e-111 Score=883.88 Aligned_cols=321 Identities=32% Similarity=0.454 Sum_probs=286.9
Q ss_pred hhcccccCCcccccchHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCceeecCCCCCC-Ccccc
Q 010044 128 IDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGI 206 (519)
Q Consensus 128 ~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI 206 (519)
+++. +.||++||||||++|++|+ +|++++++++.+| ++|||||||||||||||||+ +||||
T Consensus 55 ~~~~-~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpI 116 (487)
T 3nv9_A 55 LAGF-NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGV 116 (487)
T ss_dssp CSSG-GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHH
T ss_pred CCCH-HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCch
Confidence 3444 5599999999999999985 3556666655555 68999999999999999999 58999
Q ss_pred chhhhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCC
Q 010044 207 PVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFAN 286 (519)
Q Consensus 207 ~iGKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~ 286 (519)
||||++|||+||||| |||||||+||+| +++|| ++| .|||+++.++||. ||||||++
T Consensus 117 meGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------def-ve~v~~~~P~fG~---InlEDf~a 172 (487)
T 3nv9_A 117 MEGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAV-IEFVQRIQHTFGA---INLEDISQ 172 (487)
T ss_dssp HHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHH-HHHHHHHGGGCSE---EEECSCCT
T ss_pred hhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHH-HHHHHHhCCCCCe---ecHhhcCC
Confidence 999999999999999 999999999765 46674 343 3566667777766 99999999
Q ss_pred ccHHHHHHHHcC--CCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhh
Q 010044 287 HNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEE 364 (519)
Q Consensus 287 ~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~ee 364 (519)
||||+||+|||+ +||||||||||||+|+||||+||+|++|++|+|+||||+|||+||+|||+||+. .|+++
T Consensus 173 p~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~-- 245 (487)
T 3nv9_A 173 PNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP-- 245 (487)
T ss_dssp THHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG--
T ss_pred chHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc--
Confidence 999999999998 899999999999999999999999999999999999999999999999999985 49885
Q ss_pred hcCcEEEEecCCccccCCccCC-----chhchhhcccc--CCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcC
Q 010044 365 TRKKICLVDSKGLIVSSRKDSL-----QHFKKPWAHEH--EPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASF 436 (519)
Q Consensus 365 A~~~i~lvDs~GLi~~~R~~~l-----~~~k~~fa~~~--~~~~~L~eav~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~ 436 (519)
+||||||++|||+++|.+ | .++|.+||+.. +..++|+|||++ +|||||+|++ +|+||+|||++|+
T Consensus 246 --~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma-- 318 (487)
T 3nv9_A 246 --KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG-- 318 (487)
T ss_dssp --GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC--
T ss_pred --ccEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc--
Confidence 899999999999999954 6 34677888864 346799999998 7999999976 7999999999997
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEEecccCccceeechhhhHHHHHhCCcccChhhh
Q 010044 437 NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDML 516 (519)
Q Consensus 437 ~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~ 516 (519)
+||||||||||| |||+||||++ +|+||||||| +++|||+||+|+|||||||++++||++|||+|+
T Consensus 319 -~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~ 383 (487)
T 3nv9_A 319 -EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMA 383 (487)
T ss_dssp -SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHH
T ss_pred -CCCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHH
Confidence 899999999999 7999999998 5999999994 688999999999999999999999999999999
Q ss_pred hcC
Q 010044 517 LAA 519 (519)
Q Consensus 517 ~aA 519 (519)
+||
T Consensus 384 ~AA 386 (487)
T 3nv9_A 384 IAA 386 (487)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=2.5e-105 Score=832.52 Aligned_cols=319 Identities=31% Similarity=0.441 Sum_probs=293.4
Q ss_pred hhhHHhhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 010044 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (519)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (519)
.+++++.+++. |+|||+||||||++|++|+ ++|. +++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p~----------~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDKT----------LAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCGG----------GHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCH-HHCeEEECchHHHHHHHHH---hCHH----------HHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 56777888876 5589999999999999986 4554 444 6899999999999999999999999
Q ss_pred CC-ccccchhhhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 010044 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (519)
Q Consensus 201 ~~-GmgI~iGKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 278 (519)
++ |||||+||+.|||+||||| |+|||||+|| +||||++|+..| |. +.
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999995 799999999988 66 88
Q ss_pred eeeecCCCccHHHHHHHHcC--CCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 279 IqfEDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
||||||++||||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||++||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999875
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH
Q 010044 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~---~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~M 433 (519)
|+ ++||+||++|||+++|.++|+++|++||++... ..+|+|+|++ +|||||+|+ +|+||+|||++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 64 899999999999999933599999999986442 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEEecccCccceeechhhhHHHHHhCCcccCh
Q 010044 434 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHD 513 (519)
Q Consensus 434 a~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd 513 (519)
+ ++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||||++++||++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 8 899999999999 89999999999 99999999 5899999999999999999999999999999
Q ss_pred hhhhcC
Q 010044 514 DMLLAA 519 (519)
Q Consensus 514 ~M~~aA 519 (519)
+|++||
T Consensus 343 ~m~~aA 348 (398)
T 2a9f_A 343 EMQIAA 348 (398)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.1e-101 Score=803.68 Aligned_cols=318 Identities=31% Similarity=0.462 Sum_probs=297.0
Q ss_pred hhhHHhhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 010044 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (519)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (519)
..++++.+++.|+ |||+||||||++|++|+ ++|+++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 6788999999866 89999999999999986 5665444 6899999999999999999999999
Q ss_pred CC-ccccchhhhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 010044 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (519)
Q Consensus 201 ~~-GmgI~iGKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 278 (519)
++ |||||+||+.|||+||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 97 9999999999999999999 9999999995 699999999988 66 88
Q ss_pred eeeecCCCccHHHHHHHHcC--CCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 279 IqfEDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
||||||++|+||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||++||++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 6999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccC-CchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHH
Q 010044 357 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 432 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~-l~~~k~~fa~~~~~---~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~ 432 (519)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|+. +|||||+|+ +|+||+|+|++
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999643 99999999987442 4689999998 999999999 79999999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEEecccCccceeechhhhHHHHHhCCcccC
Q 010044 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 512 (519)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~It 512 (519)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||||++++||+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 98 799999999999 99999999999 99999999 589999999999999999999999999 99
Q ss_pred hhhhhcC
Q 010044 513 DDMLLAA 519 (519)
Q Consensus 513 d~M~~aA 519 (519)
|+|++||
T Consensus 346 ~~m~~aA 352 (388)
T 1vl6_A 346 KNMLLSA 352 (388)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=2.4e-75 Score=615.41 Aligned_cols=320 Identities=31% Similarity=0.495 Sum_probs=288.3
Q ss_pred hhhHHhhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 010044 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (519)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (519)
..++++.+++.| +|||+||||||++|++|++ |++++++ ||.++|+|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 456778888875 5899999999999999873 6666664 888999999999999999999999
Q ss_pred CC-ccccchhhhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 010044 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (519)
Q Consensus 201 ~~-GmgI~iGKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 278 (519)
.+ ++|+|+||++||++||||| ++|++||+. | .|||+++|+..+ |+ ..
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~G 131 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGG 131 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcE
Confidence 97 7999999999999999999 999999982 2 578888888766 44 56
Q ss_pred eeeecCCCccHHHHHHHHcC--CCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 279 IqfEDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
||||||+.|+||++|++|++ ++||||||+||||++.++|+++|++..|++++++|+||+|||+||.+|+.+|.+.
T Consensus 132 invED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~--- 208 (439)
T 2dvm_A 132 INLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA--- 208 (439)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc---
Confidence 99999999999999999986 7999999999999999999999999999999999999999999999999999864
Q ss_pred hcCCChhhhcCcEEEEe----cCCccccCCccC---CchhchhhccccC---CCCCHHHHhcccCCcEEEeccCCC-CCC
Q 010044 357 QTKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTF 425 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvD----s~GLi~~~R~~~---l~~~k~~fa~~~~---~~~~L~eav~~vkptvLIG~S~~~-g~F 425 (519)
|++ +++||++| ++||++++ .. |.++|++|++... ...+|.|+++. +|+|||+|+.+ |+|
T Consensus 209 --G~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~ 278 (439)
T 2dvm_A 209 --GVK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVI 278 (439)
T ss_dssp --TCC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSS
T ss_pred --CCC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCC
Confidence 765 37999999 99999887 24 7788888987532 24689999987 99999999985 899
Q ss_pred CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEEecccCccceeechhhhHHHHH
Q 010044 426 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 505 (519)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~ 505 (519)
++++++.|+ ++||||+||||+ +||++++|++| |.+++||| +++.|+|+||+|+|||||+|+++
T Consensus 279 ~~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 279 KPQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp CHHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred ChHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 999999997 899999999999 99999999998 88999999 58999999999999999999999
Q ss_pred hCCcccChhhhhcC
Q 010044 506 SGAIRVHDDMLLAA 519 (519)
Q Consensus 506 ~~a~~Itd~M~~aA 519 (519)
+||++|||+|++||
T Consensus 342 ~~a~~i~~~m~~aa 355 (439)
T 2dvm_A 342 VRARTITDSMIIAA 355 (439)
T ss_dssp TTCSCCCHHHHHHH
T ss_pred cCCCCCCHHHHHHH
Confidence 99999999999986
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.01 E-value=3.4e-09 Score=112.12 Aligned_cols=169 Identities=11% Similarity=0.180 Sum_probs=124.9
Q ss_pred CCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHH-------H--------------HHHc-------CCCcee
Q 010044 252 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFEL-------L--------------AKYG-------TTHLVF 303 (519)
Q Consensus 252 R~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~af~i-------L--------------~ryr-------~~~~~F 303 (519)
-.+-|||...++..+.+ ..++|+.+| |-+..=...+ + .||+ -.+|+|
T Consensus 111 g~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi 185 (435)
T 3gvp_A 111 GESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAM 185 (435)
T ss_dssp TCCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEE
T ss_pred CCCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEE
Confidence 34667888878776642 345677665 4443222222 1 3443 269999
Q ss_pred ----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEe
Q 010044 304 ----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (519)
Q Consensus 304 ----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvD 373 (519)
+|+++||+.++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |. +++++|
T Consensus 186 ~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D 250 (435)
T 3gvp_A 186 NVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTE 250 (435)
T ss_dssp ECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEe
Confidence 899999999999999765 79999999999999999999999998643 64 588888
Q ss_pred cCCccccCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCC
Q 010044 374 SKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQS 452 (519)
Q Consensus 374 s~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~ 452 (519)
++.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .
T Consensus 251 ~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~ 311 (435)
T 3gvp_A 251 IDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--T 311 (435)
T ss_dssp SCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--T
T ss_pred CChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--c
Confidence 7421 1111211 1113579999996 99999998888899999999997 789999999997 7
Q ss_pred CCCHHHH
Q 010044 453 ECTAEEA 459 (519)
Q Consensus 453 E~tpe~A 459 (519)
|+..+..
T Consensus 312 EId~~~L 318 (435)
T 3gvp_A 312 EIDVASL 318 (435)
T ss_dssp TBTGGGG
T ss_pred cCCHHHH
Confidence 8887654
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.97 E-value=2.4e-09 Score=113.31 Aligned_cols=130 Identities=17% Similarity=0.190 Sum_probs=105.2
Q ss_pred CCCcee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 010044 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (519)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~ 367 (519)
..+|+| +|+++||+.++++|++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 479999 89999999999999964 569999999999999999999999998653 63
Q ss_pred cEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+++++|++. .+...|. ..-...+|.|+++. +|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 688888742 1111111 11123589999997 99999988888899999999997 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 010044 447 NPTSQSECTAEEAYT 461 (519)
Q Consensus 447 NPt~~~E~tpe~A~~ 461 (519)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 998 8999987643
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.53 E-value=2.5e-08 Score=103.76 Aligned_cols=218 Identities=18% Similarity=0.242 Sum_probs=130.7
Q ss_pred ccchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--ccccchhhhhhHhhhcCCCCCceeeEEeecCCCccccccCc
Q 010044 166 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDE 243 (519)
Q Consensus 166 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp 243 (519)
.+..++++.++ +.+|+|.++++..+|++|.+.. |+.|+.+ ..+|. | +++|.+.+ |
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~--------p 82 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNA--------P 82 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSC--------C
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCC--------C
Confidence 34455555543 4689999999999999999875 8888888 67776 1 46776642 2
Q ss_pred ccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCC-CccHHHHHHHHcCCCceee-cCC------c----chh
Q 010044 244 FYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYGTTHLVFN-DDI------Q----GTA 311 (519)
Q Consensus 244 ~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~-~~~af~iL~ryr~~~~~Fn-DDi------Q----GTa 311 (519)
..+.++.+++ ...+|.+=..+ ++.+++-+.+ ..+++|+ +.+ | .+.
T Consensus 83 ------------------~~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~ 139 (401)
T 1x13_A 83 ------------------LDDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSS 139 (401)
T ss_dssp ------------------CHHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHH
T ss_pred ------------------CHHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHH
Confidence 1233444322 11122222211 3333333332 5677773 222 2 455
Q ss_pred HHHHHHHHHHHHHhC----C----------CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 312 SVVLAGVVAALKLIG----G----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 312 aV~LAgll~Alk~~g----~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
...+|| .+|++..+ + .+...+|+|+|+|.+|.++++++... |. +++++|++.-
T Consensus 140 ~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~~ 206 (401)
T 1x13_A 140 MANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRPE 206 (401)
T ss_dssp HHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCGG
T ss_pred HHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCHH
Confidence 556665 44444432 2 26689999999999999999988643 52 5889998643
Q ss_pred cccCCccCCch------------hchhhccccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHH
Q 010044 378 IVSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMA 434 (519)
Q Consensus 378 i~~~R~~~l~~------------~k~~fa~~~~~------~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma 434 (519)
..... ..+.. .+..|++...+ ..+|.+.++. .|++|++... +.++++++++.|.
T Consensus 207 ~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk 283 (401)
T 1x13_A 207 VKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK 283 (401)
T ss_dssp GHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred HHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 21100 00100 00011111000 0147788876 9999999533 3679999999997
Q ss_pred cCCCCcEEEEcCCC
Q 010044 435 SFNEKPLILALSNP 448 (519)
Q Consensus 435 ~~~erPIIFaLSNP 448 (519)
+..+|+-+|+|
T Consensus 284 ---~g~vIVdva~~ 294 (401)
T 1x13_A 284 ---AGSVIVDLAAQ 294 (401)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCcEEEEEcCC
Confidence 68899999987
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.15 E-value=6.1e-06 Score=88.55 Aligned_cols=132 Identities=15% Similarity=0.192 Sum_probs=102.0
Q ss_pred CCCcee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 010044 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (519)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~ 367 (519)
-.+|+| .|+++||+..++.|+. |.++..|.+.+++|.|+|..|.+||+.+... |.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~-----GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQA-----GA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHHC-----CC-------
Confidence 379999 7899999999999887 7899999999999999999999999888653 62
Q ss_pred cEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
+++++|++.. + ..... ...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~Aa----~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQAT----MEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHHH----HTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHHH----HhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 1 11111 111123467777775 99999988888899999999986 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 010044 448 PTSQSECTAEEAYTW 462 (519)
Q Consensus 448 Pt~~~E~tpe~A~~w 462 (519)
+. .|+..++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888766554
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.07 E-value=1.8e-05 Score=84.39 Aligned_cols=138 Identities=16% Similarity=0.211 Sum_probs=103.3
Q ss_pred CCCcee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 010044 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (519)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~ 367 (519)
-.+|+| .|+..||+-.++.|+. |.++..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 379999 6778999999988885 5679999999999999999999999988642 63
Q ss_pred cEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+++++|.+.. ....|. ..-...+|.|+++. +|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 6888876321 111111 11123579999987 99999988878899999999997 788888888
Q ss_pred CCCCCCCCCHHHH--------------hcccCCcEEE
Q 010044 447 NPTSQSECTAEEA--------------YTWSKGRAIF 469 (519)
Q Consensus 447 NPt~~~E~tpe~A--------------~~wt~G~aif 469 (519)
... .|+..+.. |.|.+|+.|+
T Consensus 335 Rgd--vEID~~aL~~~~~~~ik~~v~~~~~~~g~~i~ 369 (464)
T 3n58_A 335 HFD--NEIQVAALRNLKWTNVKPQVDLIEFPDGKRLI 369 (464)
T ss_dssp SST--TTBTCGGGTTSEEEEEETTEEEEECTTSCEEE
T ss_pred CCC--cccCHHHHHhCccccccCCeeEEEeCCCCEEE
Confidence 776 55554333 4445777665
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.59 E-value=0.00059 Score=70.02 Aligned_cols=225 Identities=15% Similarity=0.150 Sum_probs=121.4
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--ccccchhhhhhHhhhcCCCCCceeeEEeecCCC-----cccc
Q 010044 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQL 239 (519)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~Ly~a~gGI~P~~~lPI~LDvGTn-----ne~L 239 (519)
+..++++.+ .+.+|+|.++++...|+.|.... |..|..++..++ ++.| |+|.+.+- .++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 345555554 35789999999999999998764 778887776666 3334 56665432 1111
Q ss_pred ---c-cCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceeecCCcchhHHHH
Q 010044 240 ---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVL 315 (519)
Q Consensus 240 ---L-~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~L 315 (519)
+ ..-.+++.-+.- ++. +.++++.+ -|- .++.+|-+....+ ...+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~-~gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TNR---PVVEALTK-RKI-TAYAMELMPRISR-------AQSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GCH---HHHHHHHH-TTC-EEEEGGGCCCSGG-------GGGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEeccc-----CCH---HHHHHHHH-CCC-EEEEecccccccc-------ccccchhh------HHHHH
Confidence 1 112222222221 111 12222222 111 1222222211000 00122222 11122
Q ss_pred H---HHHHHHHHhCC----------CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCC
Q 010044 316 A---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (519)
Q Consensus 316 A---gll~Alk~~g~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R 382 (519)
| +++.+.+..++ .+...+|+|+|+|.+|.++++.+... |. +++++|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHH----H
Confidence 3 55666666554 67899999999999999999987542 62 4899998532 1
Q ss_pred ccCCchhch-----------------hhccccC------CCCCHHHHhcccCCcEEEecc---C--CCCCCCHHHHHHHH
Q 010044 383 KDSLQHFKK-----------------PWAHEHE------PVNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEAMA 434 (519)
Q Consensus 383 ~~~l~~~k~-----------------~fa~~~~------~~~~L~eav~~vkptvLIG~S---~--~~g~Ft~evv~~Ma 434 (519)
.+.+...-. .|++... ....|.+.++. .|++|.++ + .+.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 100000000 1111100 00127777875 99999988 3 23478999999996
Q ss_pred cCCCCcEEEEcCCC
Q 010044 435 SFNEKPLILALSNP 448 (519)
Q Consensus 435 ~~~erPIIFaLSNP 448 (519)
+..+|+-+|-+
T Consensus 286 ---~g~vivdva~~ 296 (384)
T 1l7d_A 286 ---PGSVIIDLAVE 296 (384)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCCEEEEEecC
Confidence 67899999864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.44 E-value=0.00012 Score=76.87 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=72.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc--------------hhchhh
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ--------------HFKKPW 393 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~--------------~~k~~f 393 (519)
.+...||+|+|+|.+|..+|+++... |. +++++|++.-..+...+ +. +-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999988653 52 68999997542111100 10 001124
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCC
Q 010044 394 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 455 (519)
Q Consensus 394 a~~~~~------~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~t 455 (519)
++...+ ..+|.|+++. .|++|++... +.+||+|+++.|. +.++|+-+|- |-...|.+
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2479999997 9999998433 4589999999997 8999999994 33335554
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.15 E-value=0.00045 Score=72.04 Aligned_cols=104 Identities=22% Similarity=0.197 Sum_probs=67.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCcc------CCc---hhchhhcccc--
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ---HFKKPWAHEH-- 397 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~------~l~---~~k~~fa~~~-- 397 (519)
+...||+|+|+|.+|..+|+.+... |. +++++|++.-..+.-.+ .++ .....|++..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 6789999999999999999988654 53 58899987421110000 000 0001122110
Q ss_pred ----CCCCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 398 ----EPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 398 ----~~~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
....+|.++++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 112468899987 9999997433 3579999999997 789999998543
No 16
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=97.10 E-value=0.022 Score=60.77 Aligned_cols=190 Identities=16% Similarity=0.171 Sum_probs=128.6
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHc---CCCc-ee----------ecCCcchhHHHHH
Q 010044 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TTHL-VF----------NDDIQGTASVVLA 316 (519)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a--f~iL~ryr---~~~~-~F----------nDDiQGTaaV~LA 316 (519)
.+..|...|...||..+.+.+||..=|-=+|++..-. --+.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 3556777888889999988889999999999986431 12345554 2221 11 1122346666777
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchh----
Q 010044 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 392 (519)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~---- 392 (519)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|+... .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7788888889999999999999999999999999764 52 3445899999999764 34432211
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHH
Q 010044 393 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 458 (519)
Q Consensus 393 -----------fa~~~~~~~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~tpe~ 458 (519)
|+...+... +-.+ +-.++.||||=+.. ++.+|++-++.+-+ +.-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111001100 1112 33467999998877 67999999999843 24689999999 654 55 556
Q ss_pred Hhc
Q 010044 459 AYT 461 (519)
Q Consensus 459 A~~ 461 (519)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.97 E-value=0.013 Score=62.09 Aligned_cols=178 Identities=19% Similarity=0.185 Sum_probs=126.7
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCcc-HHH-HHHHHcC---C--Ccee----------ecCCcchhHHHH
Q 010044 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN-AFE-LLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (519)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~-af~-iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (519)
.+..|-..|...|+.++.+.-||+.-|-=+|++..- -.. +.+.|+. . -.++ .|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 455677778899999999998998888889998632 222 4566642 1 0122 333456888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhc-hhhc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 394 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k-~~fa 394 (519)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. |-+-+.|++|-|+... .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999999764 52 4467999999999764 343321 1121
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 395 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 395 ~~~~-------~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
.... ..-+-.+ +-.++.||||=+... +.+|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 1112233 345689999988774 69999988877 5789998888 65
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.96 E-value=0.0076 Score=63.62 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=127.7
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHcC---C--Ccee----------ecCCcchhHHHH
Q 010044 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (519)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a--f~iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (519)
.+..|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 3456677888999999999999999999999987521 224556632 1 0122 233345776677
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEE-EEecCCccccCCccCCchhc-hhh
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPW 393 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~l~~~k-~~f 393 (519)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. | -+++ +.|++|-|+...+ |+..+ +.+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~-----G-------akVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERL-----G-------MRVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 77888889999999999999999999999999998753 5 3566 9999999998643 43221 111
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 010044 394 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (519)
Q Consensus 394 a~~~~~~~----~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~tpe~A~~ 461 (519)
......+. +-.+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111110 1112 34568999998876 669999998887 4679999999 653 43 345554
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.92 E-value=0.053 Score=57.81 Aligned_cols=183 Identities=16% Similarity=0.111 Sum_probs=126.6
Q ss_pred CCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH-----HHHHHHHcCC-Ccee----------ecCCcchhHHHH
Q 010044 252 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTT-HLVF----------NDDIQGTASVVL 315 (519)
Q Consensus 252 R~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a-----f~iL~ryr~~-~~~F----------nDDiQGTaaV~L 315 (519)
..+..|-..|...||..+.+..||+.-|--.|+...-. +...++++.. -.|| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 35667788899999999999999999999999975332 2233344332 2233 233344777778
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++.. .++..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 88889999999999999999999999999999999764 63 5567889999998764 35443322111
Q ss_pred c--cCCCCCHHH-------------HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 396 E--HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 396 ~--~~~~~~L~e-------------av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
+ ......+.+ .+-.++.|||+=+.. ++.+|++-++.+.+. .-.+|.--+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 0 000011111 123468999998877 469999999999632 2357877788 65
No 20
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.89 E-value=0.0069 Score=59.58 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=82.8
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 010044 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (519)
.+-+|+=.++..++...+..+.+.+++|+|+|..|..+|+.+... |. +++++|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHH
Confidence 444565556666677778899999999999999999999988642 52 688888742 11 111
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCCCCCCHHHHh
Q 010044 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPTSQSECTAEEAY 460 (519)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt~~~E~tpe~A~ 460 (519)
.+..-++. -...+|.+.++. .|++|-... .+.++++.++.|. +..+++=+| +|. ++..+.|.
T Consensus 194 ~~~~g~~~-~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a~ 256 (293)
T 3d4o_A 194 IAEMGMEP-FHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYAE 256 (293)
T ss_dssp HHHTTSEE-EEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHHH
T ss_pred HHHCCCee-cChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHHH
Confidence 11000010 012468888875 999997664 5799999999886 577888888 453 45555553
No 21
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.46 E-value=0.0048 Score=62.63 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=78.9
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 010044 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (519)
+-.-+|-.|++-.++-.+.+++..++||+|+| ..|.-+|.++... | ..+.+|+++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44456788899999999999999999999999 5799999998753 4 358888743
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010044 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (519)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (519)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468999997 99999999999999999985 56677777754
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.36 E-value=0.0073 Score=60.85 Aligned_cols=92 Identities=18% Similarity=0.284 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh
Q 010044 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (519)
Q Consensus 311 aaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~ 389 (519)
.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+.+|+|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3567788999999999999999999999976 899999998753 42 47777652
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 390 k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1368899997 99999999999999999884 456776664
No 23
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.24 E-value=0.04 Score=58.18 Aligned_cols=178 Identities=14% Similarity=0.172 Sum_probs=113.0
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHcC---CC---cee----------ecCCcchhHHH
Q 010044 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---TH---LVF----------NDDIQGTASVV 314 (519)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a--f~iL~ryr~---~~---~~F----------nDDiQGTaaV~ 314 (519)
.+..|-..|...|+.++.+.-||..-|-=+|++..-. --+.+.|+. .. .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 3445677789999999999999999999999997521 234566642 11 222 22223466666
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC-----CccccCCccCCchh
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHF 389 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~-----GLi~~~R~~~l~~~ 389 (519)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++ |-|++... |+..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~G--ld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNENG--IDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSSC--CCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCCC--CCHH
Confidence 667778888899999999999999999999999999763 53 333389999 99998653 4322
Q ss_pred ch-hhccccCCC------C--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 390 KK-PWAHEHEPV------N--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 390 k~-~fa~~~~~~------~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
.. .+......+ . +-.+ +-.++.||||=+.. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 11 111111111 0 1112 23457888887665 568888877776 4567777777 54
No 24
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.19 E-value=0.064 Score=57.48 Aligned_cols=179 Identities=15% Similarity=0.162 Sum_probs=120.9
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHcC---C-Ccee----------ecCCcchhHHHHHH
Q 010044 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T-HLVF----------NDDIQGTASVVLAG 317 (519)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a--f~iL~ryr~---~-~~~F----------nDDiQGTaaV~LAg 317 (519)
+..|-..|...||..+.+..||..=|-=+|++..-. --+.+.|+. . ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 455667777889999998889998899999987421 123455542 1 0111 11223466666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEE-EEecCCccccCCccCCchh-------
Q 010044 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHF------- 389 (519)
Q Consensus 318 ll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~l~~~------- 389 (519)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|+... .++..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 778888889999999999999999999999999763 52 455 899999988764 34222
Q ss_pred -c-------hhhccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 390 -K-------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 390 -k-------~~fa~~~~~~~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
| ..|+...+... +-.+.. .++.||||=+.. ++.+|++-++.+-+ +.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 11221000000 001222 568999998885 67999999999853 35679999999 65
No 25
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.13 E-value=0.027 Score=60.34 Aligned_cols=124 Identities=16% Similarity=0.222 Sum_probs=89.1
Q ss_pred cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCcc
Q 010044 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 384 (519)
Q Consensus 305 DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~ 384 (519)
+.+.|.......|+ .+.++..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. +
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~-- 292 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----C-- 292 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----H--
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----h--
Confidence 34455555556662 36788899999999999999999999998653 53 6888887521 0
Q ss_pred CCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010044 385 SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (519)
Q Consensus 385 ~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~ 461 (519)
.+. .+...-...+|.|+++. .|++|......++++++.++.|. +..||.=.|.-. .|+.-++..+
T Consensus 293 ~~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 293 AIQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HHH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HHH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 001 00111112479999986 99999998778899999999986 677888888755 6777776665
No 26
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.12 E-value=0.012 Score=59.39 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 010044 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (519)
Q Consensus 310 TaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (519)
-.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+.+|+++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34578888999999999999999999999876 899999999753 42 47788752
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 010044 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPT 449 (519)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt 449 (519)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||.
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1368899987 99999999999999999984 456776664 444
No 27
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.08 E-value=0.0069 Score=61.85 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHH---------hCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCC
Q 010044 313 VVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (519)
Q Consensus 313 V~LAgll~Alk~---------~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R 382 (519)
+|-.|.+-.++- .|.++...++||+|+|. .|.-+|+++... | ..+.++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 344555666666 68899999999999995 599999888652 4 3589999976655555
Q ss_pred ccCCchhchhhccccCC---C--CCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 383 KDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 383 ~~~l~~~k~~fa~~~~~---~--~~L~eav~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
.+.+... ++.... . .+|.++++. +|++|+..+.++. +|.|+|+ +.-+|+-++.|-
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 4434311 111100 1 479999998 9999999999887 9999974 345777777764
No 28
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.07 E-value=0.012 Score=58.46 Aligned_cols=88 Identities=15% Similarity=0.202 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (519)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.+. |. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~-----G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTH-----GV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHC-----CC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 468889999888899999999999998888888777653 64 679988874 222 111112221
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEeccCCC
Q 010044 395 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 422 (519)
Q Consensus 395 ~~-------~~~~~~L~eav~~vkptvLIG~S~~~ 422 (519)
.. .-+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888887 99999887654
No 29
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.06 E-value=0.011 Score=59.25 Aligned_cols=92 Identities=10% Similarity=0.215 Sum_probs=74.1
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 010044 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (519)
+-.-+|-.|++..++..+ |+..++|++|+| ..|..+|.++... |. .+.+|+++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 334578889999999998 999999999998 4899999999753 42 57788752
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
..+|.+.++. +|++|...+.++.+++++|+ +.-+|+=++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 222 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVG 222 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEec
Confidence 1468899998 99999999999999998873 455776664
No 30
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.02 E-value=0.0099 Score=60.01 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=78.4
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 010044 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (519)
+-.-+|-.|++-.++..+.+++..++||+|+|. .|.-+|.++... | ..+.+|+++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 445677888999999999999999999999995 699999888652 4 357788632
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010044 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (519)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (519)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468999998 99999999999999999984 55677777754
No 31
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.00 E-value=0.07 Score=56.38 Aligned_cols=186 Identities=20% Similarity=0.186 Sum_probs=121.8
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHH---HHHHHcC---C--CceeecC----------CcchhHHHH
Q 010044 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---T--HLVFNDD----------IQGTASVVL 315 (519)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~af~---iL~ryr~---~--~~~FnDD----------iQGTaaV~L 315 (519)
+.+|-..+...|+.++.+.-||..-|-=+|++.. ..+ +.+.|+. . ..++.-+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456678899999999999899999999999973 222 2355532 1 1222222 123555555
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEE-EEecCCccccCCccC---Cchhch
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDS---LQHFKK 391 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~---l~~~k~ 391 (519)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++|.|++..+-+ +..++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~-----Ga-------kVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKM-----GA-------KVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 56777788899999999999999999999999888652 52 455 999999999764211 222222
Q ss_pred hhcc-------cc---CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHh
Q 010044 392 PWAH-------EH---EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAY 460 (519)
Q Consensus 392 ~fa~-------~~---~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~tpe~A~ 460 (519)
..-. .. ..+.+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |++ +| +++.+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~t-~~--a~~~l 333 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPTT-PE--AERIL 333 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCBC-HH--HHHHH
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcCC-HH--HHHHH
Confidence 1110 00 11111123 34468999997775 678998888776 4678888888 653 33 33444
Q ss_pred c
Q 010044 461 T 461 (519)
Q Consensus 461 ~ 461 (519)
.
T Consensus 334 ~ 334 (421)
T 1v9l_A 334 Y 334 (421)
T ss_dssp H
T ss_pred H
Confidence 4
No 32
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.96 E-value=0.1 Score=55.44 Aligned_cols=188 Identities=16% Similarity=0.147 Sum_probs=126.4
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHcC---C--Ccee----------ecCCcchhHHHH
Q 010044 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (519)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~--af~iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (519)
.+..|-..|...|+.++.+.-||..-|-=+|++..- ---+.+.|+. . -.++ ++.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 345667788999999999999998889899998741 1124556632 1 1222 233345666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEE-EEecCCccccCCccC---Cchhch
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDS---LQHFKK 391 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~---l~~~k~ 391 (519)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++|-|++...=+ |..++.
T Consensus 220 ~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~Gld~~~l~~~~~ 287 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEAGIDPYDLLRHVQ 287 (440)
T ss_dssp HHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence 77788888899999999999999999999999999763 52 455 999999999875311 222222
Q ss_pred hhcc--ccC--CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 010044 392 PWAH--EHE--PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (519)
Q Consensus 392 ~fa~--~~~--~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~tpe~A~~ 461 (519)
.+-. +-. ..-+-.+ +-.++.||||=++. ++.+|.+-++.+ .-.+|.--+| |++ +| +++.+.
T Consensus 288 ~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~t-~e--A~~iL~ 353 (440)
T 3aog_A 288 EFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPTT-PA--ADDILL 353 (440)
T ss_dssp HTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred hcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCccccC-HH--HHHHHH
Confidence 2110 000 0012334 44578999998876 568998888877 4678888888 653 33 345544
No 33
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.96 E-value=0.013 Score=57.93 Aligned_cols=156 Identities=17% Similarity=0.224 Sum_probs=89.3
Q ss_pred HHHHHHHHHH-hcCCCeeeeeecCCCccHHHHHHHHcC--------CCceeecC-CcchhHHHHHHHHHH-HHHhCCCcc
Q 010044 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD-IQGTASVVLAGVVAA-LKLIGGTLA 330 (519)
Q Consensus 262 idefv~av~~-~fGp~~lIqfEDf~~~~af~iL~ryr~--------~~~~FnDD-iQGTaaV~LAgll~A-lk~~g~~l~ 330 (519)
+.++++.++. .|.+ ++.--=-...+++++++... +..++.|+ ..|.-.= -.|++.+ ++-.|.+++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~ 119 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLR 119 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCT
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCcc
Confidence 5677777653 4533 44433333455666654421 11244443 3553333 4588888 887888999
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc---ccCCCCCHHHHh
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNLLDAV 407 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~---~~~~~~~L~eav 407 (519)
+.+++|+|||.+|.+++..|.+. |. ++|+++++. .+| .....+.+.. ......+|.+
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-----G~------~~v~i~~R~----~~~---a~~la~~~~~~~~~~~~~~~l~~-- 179 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-----GP------SELVIANRD----MAK---ALALRNELDHSRLRISRYEALEG-- 179 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-----CC------SEEEEECSC----HHH---HHHHHHHHCCTTEEEECSGGGTT--
T ss_pred CCEEEEECccHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHH---HHHHHHHhccCCeeEeeHHHhcc--
Confidence 99999999998888888777652 64 579988874 222 1111222221 0011122322
Q ss_pred cccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEEc-CCCC
Q 010044 408 KVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILAL-SNPT 449 (519)
Q Consensus 408 ~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaL-SNPt 449 (519)
-++|++|-++..+ -.+..+.+ .+..+||=+ .||.
T Consensus 180 --~~~DivInaTp~gm~~~~~~i~~~~l------~~~~~V~DlvY~P~ 219 (272)
T 3pwz_A 180 --QSFDIVVNATSASLTADLPPLPADVL------GEAALAYELAYGKG 219 (272)
T ss_dssp --CCCSEEEECSSGGGGTCCCCCCGGGG------TTCSEEEESSCSCC
T ss_pred --cCCCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeecCCC
Confidence 3699999877543 12444332 367788877 5664
No 34
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.87 E-value=0.016 Score=58.38 Aligned_cols=107 Identities=18% Similarity=0.256 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh
Q 010044 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (519)
Q Consensus 311 aaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~ 389 (519)
.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... |. .+.+|+++ +
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------T------ 195 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------T------ 195 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-------C------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------C------
Confidence 3567788999999999999999999999875 899999999753 42 46777642 1
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCC----CCCCHHHHhc
Q 010044 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPTSQ----SECTAEEAYT 461 (519)
Q Consensus 390 k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt~~----~E~tpe~A~~ 461 (519)
.+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||... --+.+|++.+
T Consensus 196 -----------~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~~~gkl~GDVdf~~v~~ 253 (286)
T 4a5o_A 196 -----------RDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQADGRLVGDVEYEVAAQ 253 (286)
T ss_dssp -----------SCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSSCCCCSSCSBCHHHHHH
T ss_pred -----------cCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEecccccccCCcccCccHHHHHh
Confidence 368899987 99999999999999999984 556777664 66421 2345555544
No 35
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.69 E-value=0.011 Score=58.70 Aligned_cols=111 Identities=22% Similarity=0.268 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (519)
-.|++.+++-.+.++++.+++|+|||.+|.+++..|.+ .|. ++|+++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 35678888888999999999999999998888888765 364 578888875 222222221 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEeccCCCCCCCH--HHHHHHHcCCCCcEEEEcC-CCC
Q 010044 395 HEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTK--EVIEAMASFNEKPLILALS-NPT 449 (519)
Q Consensus 395 ~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~--evv~~Ma~~~erPIIFaLS-NPt 449 (519)
. ....++.++++. +|++|-++..+ .... +.+ ......+..+|+=|+ ||.
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G-m~~~~~~~l-~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG-MNGNTDSVI-SLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--------CCSS-CCTTCCSSCEEEESCCSSS
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC-CCCCCcCCC-CHHHcCCCCEEEEecCCCC
Confidence 0 112356666766 99999776644 2211 011 112234667888875 764
No 36
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.68 E-value=0.018 Score=58.38 Aligned_cols=95 Identities=24% Similarity=0.325 Sum_probs=75.8
Q ss_pred cchhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCC
Q 010044 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 386 (519)
Q Consensus 308 QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l 386 (519)
.|-.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++ +.
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T~-- 200 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------TS-- 200 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------SC--
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------CC--
Confidence 3445677888999999999999999999999876 899999999763 42 57888762 11
Q ss_pred chhchhhccccCCCCCHH--HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 387 QHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 387 ~~~k~~fa~~~~~~~~L~--eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+|. +.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 201 ---------------~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 201 ---------------TEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------HHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------Cchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 355 88887 99999999999999999973 556776664
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=95.54 E-value=0.028 Score=60.43 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=78.5
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 010044 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (519)
|+......| ..+.+|..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. + .+..
T Consensus 258 ~~~~~l~~g---w~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~----~--~~~a 316 (494)
T 3d64_A 258 GCRESLVDG---IKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI----C--ALQA 316 (494)
T ss_dssp HHHTTHHHH---HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH----H--HHHH
T ss_pred hhhhhhhhh---hhhccccccCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH----h--HHHH
Confidence 333334455 236789999999999999999999999988532 53 6888887521 0 0010
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
. ...-...+|.|+++. .|+++......++++++.++.|. +..||.=.|...
T Consensus 317 ~-----~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 317 A-----MEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp H-----TTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred H-----HcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 0 001112479999987 99999997777899999999996 677888788754
No 38
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.49 E-value=0.052 Score=56.01 Aligned_cols=173 Identities=18% Similarity=0.189 Sum_probs=110.3
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHcC---CCcee---ecCCcchhHHHHHHHHHHHHHhC
Q 010044 255 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLIG 326 (519)
Q Consensus 255 g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~a--f~iL~ryr~---~~~~F---nDDiQGTaaV~LAgll~Alk~~g 326 (519)
..+-++++..|.+++.+..|+ -|-=+|++..-. --+.++|+. +-..+ .|--.-||-=+.-++-.+++..|
T Consensus 92 ~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 92 PSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 345567788888888887765 467889976321 224556652 11111 11112355556667777888889
Q ss_pred C-CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc-CCCCCHH
Q 010044 327 G-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLL 404 (519)
Q Consensus 327 ~-~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~-~~~~~L~ 404 (519)
. +|++.+|+|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..|+... ...-++.
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~ 225 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALE 225 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChH
Confidence 8 8999999999999999999998864 363 67788864 111 2222211 0112444
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 010044 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E~tpe~A~~ 461 (519)
+..+ ++.|+|+=+. ..+.++++-++.| +-.+|.--+| |+..+|+ .++++
T Consensus 226 ell~-~~~DIliP~A-~~~~I~~~~~~~l----k~~iVie~AN~p~t~~eA--~~~L~ 275 (355)
T 1c1d_A 226 DVLS-TPCDVFAPCA-MGGVITTEVARTL----DCSVVAGAANNVIADEAA--SDILH 275 (355)
T ss_dssp GGGG-CCCSEEEECS-CSCCBCHHHHHHC----CCSEECCSCTTCBCSHHH--HHHHH
T ss_pred Hhhc-CccceecHhH-HHhhcCHHHHhhC----CCCEEEECCCCCCCCHHH--HHHHH
Confidence 5443 4689999544 5679999999999 3578888888 6533342 34443
No 39
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.42 E-value=0.095 Score=54.08 Aligned_cols=102 Identities=16% Similarity=0.307 Sum_probs=64.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (519)
++.+.+++|+|||..|..+++.+... |. ++|+++|+. ..| .....+.|--..-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57899999999999999999988653 64 579988873 111 1111111211111124678888
Q ss_pred cccCCcEEEeccCCC-CCCCHHHHHH--HH-cCCCCcEEEEcCCCC
Q 010044 408 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 449 (519)
Q Consensus 408 ~~vkptvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPIIFaLSNPt 449 (519)
+. +|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 65 99999887654 3568888887 43 222344666677664
No 40
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.40 E-value=0.38 Score=50.69 Aligned_cols=178 Identities=18% Similarity=0.176 Sum_probs=119.3
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHcC---C--Cceee----------cCCcchhHHHHH
Q 010044 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVFN----------DDIQGTASVVLA 316 (519)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~--af~iL~ryr~---~--~~~Fn----------DDiQGTaaV~LA 316 (519)
+.+|-..+...|+.++.+.-||..-|-=+|++..- ---+.+.|+. . ..++- +.-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566788899999999988998888899998752 1123455531 1 12332 222345555666
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhc-hhhcc
Q 010044 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAH 395 (519)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k-~~fa~ 395 (519)
++-.+++..|.+++..||+|.|.|..|...|++|.+. .|. +=+-+.|++|-+++... ++... +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~----~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE----LGS------KVVAVSDSRGGIYNPEG--FDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT----TCC------EEEEEECSSCEEECTTC--CCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh----cCC------EEEEEEeCCCeEECCCC--CCHHHHHHHHH
Confidence 7777888899999999999999999999999988651 253 33349999999988753 43321 11111
Q ss_pred ccCCC--------CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 396 EHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 396 ~~~~~--------~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
....+ -+-.| +-.++.||||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11110 12334 45578999997776 568999888877 4668888888 65
No 41
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.36 E-value=0.023 Score=57.60 Aligned_cols=91 Identities=23% Similarity=0.293 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (519)
-.|++.+++-.|.++++.+++|+|||.+|.+||..|.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788888888999999999999999888888887765 364 6899998852 11111111111221
Q ss_pred cc------cCCC---CCHHHHhcccCCcEEEeccCCC
Q 010044 395 HE------HEPV---NNLLDAVKVIKPTILIGSSGVG 422 (519)
Q Consensus 395 ~~------~~~~---~~L~eav~~vkptvLIG~S~~~ 422 (519)
.. ..+. .+|.++++. +|++|-++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 10 0111 236667765 99999877654
No 42
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.30 E-value=0.026 Score=57.14 Aligned_cols=90 Identities=26% Similarity=0.329 Sum_probs=58.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
.|++.+++-.|.++++.+++|+|||.+|.+|+..|.+ .|. ++|+++++. ..|.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5788888888899999999999999888888888765 364 689999884 2211111111112211
Q ss_pred c------cCCCCCH---HHHhcccCCcEEEeccCCC
Q 010044 396 E------HEPVNNL---LDAVKVIKPTILIGSSGVG 422 (519)
Q Consensus 396 ~------~~~~~~L---~eav~~vkptvLIG~S~~~ 422 (519)
. ..+..++ .+.++. +|++|-++..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566776 89999877655
No 43
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.23 E-value=0.033 Score=56.05 Aligned_cols=99 Identities=14% Similarity=0.288 Sum_probs=76.8
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 010044 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (519)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++.. .|. ...+.+++|+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445567778999999999999999999999996 58888888753 210 1457777532
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|-
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~r 235 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVSR 235 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCCC
Confidence 1479999997 99999999999999999984 456888777653
No 44
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.17 E-value=0.01 Score=51.73 Aligned_cols=109 Identities=17% Similarity=0.248 Sum_probs=63.4
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 010044 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (519)
|..+|+.+++-.+-+.. +.||+|+|+|..|..+++.+.. .|. + ++++|+. .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33445555544333322 7899999999999988877753 242 4 8888873 111 222
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
..+.|.-......++.++++. +|++|-+++.+ ..++.+.+ .+.-+|+-+++|.
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~~~~~~~~~l------~~g~~vid~~~p~ 113 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSKTPIVEERSL------MPGKLFIDLGNPP 113 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCSSCSBCGGGC------CTTCEEEECCSSC
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCCCcEeeHHHc------CCCCEEEEccCCc
Confidence 222221111234678888886 89998776544 23444333 2456777777774
No 45
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.14 E-value=0.033 Score=54.79 Aligned_cols=111 Identities=21% Similarity=0.197 Sum_probs=74.1
Q ss_pred HHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCC
Q 010044 322 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 401 (519)
Q Consensus 322 lk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~ 401 (519)
++..+..|.+.+++|+|+|..|..+|+.+... |. +++++|+.- .+ +...+..-++. -...
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 34567899999999999999999999988642 53 688888742 11 11111100110 0124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHh
Q 010044 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAY 460 (519)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~ 460 (519)
+|.|.++. .|++|-... .+.++++.++.|. +..+|+=+|.-. .+|..+.+.
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a~ 258 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYAE 258 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHHH
Confidence 68888875 999997766 4699999888885 577888888632 345455443
No 46
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.13 E-value=0.0069 Score=60.28 Aligned_cols=124 Identities=18% Similarity=0.305 Sum_probs=72.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC-CCCHHHHhcccC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVIK 411 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~-~~~L~eav~~vk 411 (519)
||.|+|||..|.++|..++.. |+ ...++++|.+---......++.+.. +|.....- ..+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-----GS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 899999999999999877542 54 2479999985210000000011111 11111000 023 366776
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCC
Q 010044 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 473 (519)
Q Consensus 412 ptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGS 473 (519)
+|++|=+.+.+.. +-+++++.|+++++.-+|+-.|||.. ...+.+.+.+.-.-+|++|.
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~gt 140 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSGT 140 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECTT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCCc
Confidence 8998865543321 22788888988888888888999973 33444555555556777764
No 47
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=95.08 E-value=0.65 Score=49.46 Aligned_cols=178 Identities=17% Similarity=0.186 Sum_probs=118.0
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHH--HHHHHHcC---C--Cceeec----------CCcchhHHHHHH
Q 010044 255 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T--HLVFND----------DIQGTASVVLAG 317 (519)
Q Consensus 255 g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~af--~iL~ryr~---~--~~~FnD----------DiQGTaaV~LAg 317 (519)
..|-..|...||..+.+..||..-|-=+|++..-.. -+.+.|++ . .-|+-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 456677777899999888999999999999876211 12334432 1 122211 123466556667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCC-chh-------
Q 010044 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------- 389 (519)
Q Consensus 318 ll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l-~~~------- 389 (519)
+-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|.|++.. .+ ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888899999999999999999999999988764 53 3344799999998764 34 221
Q ss_pred -ch-------hhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 390 -KK-------PWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 390 -k~-------~fa~~--~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
+. .|+.. .+.+ +-.+. -.++.|+|+=+.. ++.+|++-++.+.+ |.-.+|.--+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i-~~~e~-~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFF-PGEKP-WGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEE-ETCCG-GGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEe-Cchhh-hcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 11 11110 0000 00112 2568999997775 67999999999964 23579998888 65
No 48
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.00 E-value=0.024 Score=56.27 Aligned_cols=87 Identities=22% Similarity=0.247 Sum_probs=58.0
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 010044 316 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (519)
Q Consensus 316 Agll~Alk~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (519)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.+. |. ++++++|+. .+| .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~-----G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLST-----AA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 789999999999999999988887652 53 579988874 121 111111221
Q ss_pred c---ccCCCCCHHHHhcccCCcEEEeccCCC
Q 010044 395 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (519)
Q Consensus 395 ~---~~~~~~~L~eav~~vkptvLIG~S~~~ 422 (519)
. ......++.++++. +|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011246666765 99999888755
No 49
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=94.88 E-value=0.021 Score=55.92 Aligned_cols=118 Identities=18% Similarity=0.238 Sum_probs=72.2
Q ss_pred hhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHH-hcCCCeeeeeecCCCccHH
Q 010044 212 ALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ-NYGEKVLIQFEDFANHNAF 290 (519)
Q Consensus 212 ~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~-~fGp~~lIqfEDf~~~~af 290 (519)
..|..+ ||| ..-+.+|+..+ + +.++++.++. .|.+ ++..==-..+++
T Consensus 32 ~~~~~~-gi~---~~y~~~~~~~~---------------------~----l~~~i~~l~~~~~~G---~nVtiP~k~~i~ 79 (287)
T 1nvt_A 32 AAFKDK-GLN---YVYVAFDVLPE---------------------N----LKYVIDGAKALGIVG---FNVTIPHKIEIM 79 (287)
T ss_dssp HHHHHT-TCC---EEEEEEECCGG---------------------G----GGGHHHHHHHHTCCE---EEECTTSTTGGG
T ss_pred HHHHHc-CCC---cEEEEEEcCHH---------------------H----HHHHHHHHHhCCCCE---EEEccCCHHHHH
Confidence 466666 798 77788887421 1 3455666544 4544 444422233333
Q ss_pred HHHHH-------HcC-CCceeecC-CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCC
Q 010044 291 ELLAK-------YGT-THLVFNDD-IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAP 361 (519)
Q Consensus 291 ~iL~r-------yr~-~~~~FnDD-iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~ 361 (519)
.++++ ... +..+++|. ..|+-. ...|++.+++..+.++++.+++|.|||.+|.++|..+.+. |
T Consensus 80 ~~~d~~~~~a~~igavnt~~~~~g~l~g~nT-d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~~-----G-- 151 (287)
T 1nvt_A 80 KYLDEIDKDAQLIGAVNTIKIEDGKAIGYNT-DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKD-----N-- 151 (287)
T ss_dssp GGCSEECHHHHHHTCCCEEEEETTEEEEECC-HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS-----S--
T ss_pred HHHHhcCHHHHHhCceeeEEeeCCEEEEecC-CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHC-----C--
Confidence 33331 111 22334444 246322 6789999999888899999999999997777777766431 2
Q ss_pred hhhhcCcEEEEecC
Q 010044 362 VEETRKKICLVDSK 375 (519)
Q Consensus 362 ~eeA~~~i~lvDs~ 375 (519)
+++++|++
T Consensus 152 ------~V~v~~r~ 159 (287)
T 1nvt_A 152 ------NIIIANRT 159 (287)
T ss_dssp ------EEEEECSS
T ss_pred ------CEEEEECC
Confidence 68888874
No 50
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.80 E-value=0.038 Score=53.99 Aligned_cols=145 Identities=19% Similarity=0.292 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhcCC--------CeeeeeecCCCccHHHHHH--HHcCCCceeecCCcchhHHHHHHHHHHHHHhCCCccc
Q 010044 262 LDEFMSAVKQNYGE--------KVLIQFEDFANHNAFELLA--KYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAE 331 (519)
Q Consensus 262 idefv~av~~~fGp--------~~lIqfEDf~~~~af~iL~--ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d 331 (519)
+.+|++.++..|.+ ..++.+=|- ++.|..+=. -...+ .=+|=|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 56677766644421 234555566 666665411 00001 2334442 3677777654 5778
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
+++|+|||.+|.+++..|.+. |. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~~-----G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQM-----GV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 999999999999999888753 64 689999884 222222211 1111 123467888876
Q ss_pred CcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 412 PTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 412 ptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
+|++|-++..+ ..+..+.++ +..+|+-++-
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Divy 201 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVIY 201 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEeeC
Confidence 99999766433 134444432 5678887654
No 51
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.55 E-value=0.072 Score=52.11 Aligned_cols=121 Identities=17% Similarity=0.255 Sum_probs=74.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
..||.|+|+|..|.++|..+... |.+ ..+++++|++ . +.+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 642 2478888873 1 1122222222 11112578888886
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEEEcCCCCCcccc
Q 010044 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTSQSECTAEEAYTWSKG--RAIFASGSPFDPFEY 480 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNPt~~~E~tpe~A~~wt~G--~aifAsGSPf~pv~~ 480 (519)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .++.-+|... +++-+ -|+.|...
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 88877 44444 4567888888764 56668888887764 3343344332 33322 46666655
No 52
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.41 E-value=0.062 Score=54.55 Aligned_cols=96 Identities=19% Similarity=0.274 Sum_probs=64.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc----CCCCCHH
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 404 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~----~~~~~L~ 404 (519)
++..+++|+|||.+|.+++..+... | | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----G-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----T-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 6678999999999999999888653 5 2 68888874 122 222222232210 0113567
Q ss_pred HHhcccCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 010044 405 DAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 448 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 448 (519)
+.++. .|++|.+++.++ +++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77774 999999887654 26888898886 55677777754
No 53
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.40 E-value=0.22 Score=53.84 Aligned_cols=179 Identities=20% Similarity=0.256 Sum_probs=117.3
Q ss_pred CChhhhHHHHHHHHHHHHH--hcCCCeeeeeecCCCccH--HHHHHHHcCC--C-------ceeecCC---------cch
Q 010044 253 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNA--FELLAKYGTT--H-------LVFNDDI---------QGT 310 (519)
Q Consensus 253 ~~g~~y~~~idefv~av~~--~fGp~~lIqfEDf~~~~a--f~iL~ryr~~--~-------~~FnDDi---------QGT 310 (519)
.+..|-..+.-.||..+.+ ..||..-|-=+|++..-. --+.+.|+.. . ++--.-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4567788889999999985 788988899999987532 2256777521 1 1111111 234
Q ss_pred hHHHHHHHHH------HHHHhCC--CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCC
Q 010044 311 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (519)
Q Consensus 311 aaV~LAgll~------Alk~~g~--~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R 382 (519)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|+...
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4434444433 3456675 58999999999999999999999763 53 4566899999999764
Q ss_pred ccCCch-----hchhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 383 KDSLQH-----FKKPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 383 ~~~l~~-----~k~~fa~~--~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
.++. ++.....- -+....+.+.+-.++.||||=+... +.+|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3433 22221110 0000001112445789999988875 79999998877 4789999999 53
No 54
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.38 E-value=0.28 Score=50.97 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=83.7
Q ss_pred CCceeecCC---cchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 299 THLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 299 ~~~~FnDDi---QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.|++.|.-- +.+|=-+++.+++..|-.|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 455555432 2344458999999999999999999999999999999999998643 64 57888863
Q ss_pred CccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc---C-----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 376 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 376 GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S---~-----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
.- . . . ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..++.=.|.
T Consensus 149 ~~------~-~-----~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A-R-----E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H-H-----S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h-h-----c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 11 0 0 0 01123579999986 89887542 1 34688999998886 5678777775
No 55
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.36 E-value=0.057 Score=53.35 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=63.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch---hchhhccccCC--CCCHHHH
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAHEHEP--VNNLLDA 406 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~---~k~~fa~~~~~--~~~L~ea 406 (519)
.||.|+|||+.|.++|..|+.. |+ ...++++|++- ++.+.+.. +-..+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999998764 54 25799999851 11111110 00011110001 1456 77
Q ss_pred hcccCCcEEEeccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 407 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 407 v~~vkptvLIG~S~~~-------g~F-----------t~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
++. +|++|=+...+ |.. -+++++.|.+++++.+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 775 89888554432 211 2588888988888888888999974
No 56
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.27 E-value=0.098 Score=52.39 Aligned_cols=101 Identities=23% Similarity=0.299 Sum_probs=66.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC---CCCHHHHhc
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 408 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~---~~~L~eav~ 408 (519)
||+|+|| |..|..++..|+. .|+ ...++++|.+-. .....+|.+...+ . +... ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999999887653 354 357999998651 1100012221100 0 0011 136888999
Q ss_pred ccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 409 VIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 409 ~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
+ +|++|=+.+.+ | ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 99988555443 2 24667888888889998988899997
No 57
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.20 E-value=0.1 Score=53.82 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCcee-e---------cCCcchhHHHHHHHHHHHHHh-CC
Q 010044 259 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVF-N---------DDIQGTASVVLAGVVAALKLI-GG 327 (519)
Q Consensus 259 ~~~idefv~av~~~fGp~~lIqfEDf~~~~af~iL~ryr~~~~~F-n---------DDiQGTaaV~LAgll~Alk~~-g~ 327 (519)
++++..|.+++.+..|+ -|-=+|++..-. .+...-+.+.++ - |----||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677788888887775 467778875332 333333333111 1 111234444455556666664 76
Q ss_pred -CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 010044 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (519)
Q Consensus 328 -~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (519)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ + +.+..+.+.|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999998753 63 57788852 1 11333333221 111133333
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 010044 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (519)
.. .+.||+|=++ ..++++++.++.| .-.+|.--+| |+
T Consensus 227 l~-~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 YG-VTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-CCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred hc-cCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 32 5789999654 4669999988888 3567776777 54
No 58
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.02 E-value=0.086 Score=53.18 Aligned_cols=124 Identities=17% Similarity=0.236 Sum_probs=77.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC---CCHHHHhc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 408 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~---~~L~eav~ 408 (519)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+-=..+.-...+.+.. .+......+ .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999999763 54 139999986211100000011111 111111122 57888998
Q ss_pred ccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcE
Q 010044 409 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRA 467 (519)
Q Consensus 409 ~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~a 467 (519)
+ +|++|=+.+.+ |. +-+++.+.|.++++.-+|+=-|||..- +.+-+++.+ .-.-
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~---~t~~~~~~~~~~~~r 152 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC---MVKVMCEASGVPTNM 152 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGG
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH---HHHHHHHhcCCChhc
Confidence 7 99988665333 32 246888899999988898888999743 234444444 3345
Q ss_pred EEEcC
Q 010044 468 IFASG 472 (519)
Q Consensus 468 ifAsG 472 (519)
+|++|
T Consensus 153 viG~g 157 (331)
T 1pzg_A 153 ICGMA 157 (331)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 78886
No 59
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.02 E-value=0.13 Score=50.09 Aligned_cols=108 Identities=19% Similarity=0.309 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (519)
..|++.+++..|..+++.+++|+|+|.+|.++|..+.+. |. +++++|+. .++ .....+.+.
T Consensus 113 ~~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g 173 (275)
T 2hk9_A 113 WIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP 173 (275)
T ss_dssp HHHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC
Confidence 348888998888899999999999999999999988764 42 68888874 111 111111110
Q ss_pred cccCCCCCHHHHhcccCCcEEEeccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 010044 395 HEHEPVNNLLDAVKVIKPTILIGSSGVGRTFT--KEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 395 ~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~erPIIFaLSN 447 (519)
..-..++.++++. +|++|-+...+ ... .+.+. .....+..+|+-++.
T Consensus 174 --~~~~~~~~~~~~~--aDiVi~atp~~-~~~~~~~~i~-~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 174 --LEVVNSPEEVIDK--VQVIVNTTSVG-LKDEDPEIFN-YDLIKKDHVVVDIIY 222 (275)
T ss_dssp --EEECSCGGGTGGG--CSEEEECSSTT-SSTTCCCSSC-GGGCCTTSEEEESSS
T ss_pred --CeeehhHHhhhcC--CCEEEEeCCCC-CCCCCCCCCC-HHHcCCCCEEEEcCC
Confidence 0112367888875 99999776644 221 11221 112235667887776
No 60
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.84 E-value=0.078 Score=56.48 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=28.3
Q ss_pred HHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 010044 427 KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (519)
Q Consensus 427 ~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~ai 468 (519)
.|+++.|.++|+.-+++=.|||. .-+|- -+.++++=++|
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~v 178 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANII 178 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEE
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeE
Confidence 68999999999999999999997 33332 33444444443
No 61
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.62 E-value=0.12 Score=52.40 Aligned_cols=97 Identities=23% Similarity=0.336 Sum_probs=61.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc----ccCCCCCH
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNL 403 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~----~~~~~~~L 403 (519)
.+...+++|+|+|..|..+|+.+... |. +++++|++- ++ +...+..+.. +.....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 37789999999999999999988653 52 688888741 11 2111111111 01112357
Q ss_pred HHHhcccCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 010044 404 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 448 (519)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 448 (519)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788876 999999876543 46899999996 45566667654
No 62
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.60 E-value=0.36 Score=50.25 Aligned_cols=119 Identities=10% Similarity=0.093 Sum_probs=86.1
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
..|.+.|.-- +.+|=-+++.+++..|-.|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3566666432 3455568999999999999999999999999999999999999653 64 6788876
Q ss_pred CCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC--------CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 375 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 375 ~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~--------~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
.. . . .. ......+|.|+++. .|+++=.-- ..++|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 21 0 0 00 11223589999987 898874431 34588999999996 677888777
Q ss_pred CC
Q 010044 447 NP 448 (519)
Q Consensus 447 NP 448 (519)
.-
T Consensus 211 RG 212 (381)
T 3oet_A 211 RG 212 (381)
T ss_dssp CG
T ss_pred CC
Confidence 63
No 63
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=93.57 E-value=0.57 Score=49.20 Aligned_cols=115 Identities=21% Similarity=0.258 Sum_probs=81.1
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHH---HHHHHc---CCC-c---eeecC----------CcchhHH
Q 010044 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 313 (519)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIqfEDf~~~~af~---iL~ryr---~~~-~---~FnDD----------iQGTaaV 313 (519)
+.+|-..+...|+.++.+.-||..-|-=+|++.. ..+ +.+.|+ ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456678889999999998899888889999873 222 234553 221 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEE-EEecCCcccc
Q 010044 314 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVS 380 (519)
Q Consensus 314 ~LAgll~Alk~~g~~-l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~ 380 (519)
+.-++-.+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++ +.|+.|-++.
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~~ 251 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIYN 251 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCccccC
Confidence 666778888889999 9999999999999999999988651 254 444 4488775443
No 64
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.46 E-value=0.11 Score=51.64 Aligned_cols=120 Identities=16% Similarity=0.124 Sum_probs=75.2
Q ss_pred hhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHH-hcCCCeeeeeecCCCccHH
Q 010044 212 ALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ-NYGEKVLIQFEDFANHNAF 290 (519)
Q Consensus 212 ~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~-~fGp~~lIqfEDf~~~~af 290 (519)
..|.++ |+| ..-+.+++..++ +.++++.++. .|.+ ++.--=-...++
T Consensus 29 ~~f~~~-gl~---~~Y~~~~v~~~~-------------------------l~~~~~~~~~~~~~G---~nVTiP~K~~v~ 76 (281)
T 3o8q_A 29 LFARQT-QQS---MIYTAQCVPVDG-------------------------FTEAAKHFFAQGGRG---CNVTVPFKEEAY 76 (281)
T ss_dssp HHHHHT-TCC---EEEEEECCCTTC-------------------------HHHHHHHHHHTTCCE---EEECTTSHHHHH
T ss_pred HHHHHc-CCC---cEEEEeecCHHH-------------------------HHHHHHHHHhCCCCE---EEECCccHHHHH
Confidence 566665 788 666666664321 5667776653 4433 433322233455
Q ss_pred HHHHHHcC--------CCceeecC--CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCC
Q 010044 291 ELLAKYGT--------THLVFNDD--IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 360 (519)
Q Consensus 291 ~iL~ryr~--------~~~~FnDD--iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~ 360 (519)
+++++... +..+|++| ..|.-.= -.|++.+|+-.|.++++.+++|+|||.+|.+++..|.+ .|.
T Consensus 77 ~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~ 150 (281)
T 3o8q_A 77 RFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP 150 (281)
T ss_dssp HHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC
T ss_pred HHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC
Confidence 55554321 22345554 3442221 46888889888999999999999999888888877764 364
Q ss_pred ChhhhcCcEEEEecC
Q 010044 361 PVEETRKKICLVDSK 375 (519)
Q Consensus 361 ~~eeA~~~i~lvDs~ 375 (519)
++|+++++.
T Consensus 151 ------~~v~v~~R~ 159 (281)
T 3o8q_A 151 ------ASITVTNRT 159 (281)
T ss_dssp ------SEEEEEESS
T ss_pred ------CeEEEEECC
Confidence 689999884
No 65
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.44 E-value=0.1 Score=52.09 Aligned_cols=104 Identities=19% Similarity=0.302 Sum_probs=67.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
.|++.+|+-.|.++++.+++|+|||.||.+++..|.+. |. ++|+++++. .+|.+.|. ..+.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~-----G~------~~v~v~nRt----~~ka~~La---~~~~- 167 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDN-----FA------KDIYVVTRN----PEKTSEIY---GEFK- 167 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHT-----TC------SEEEEEESC----HHHHHHHC---TTSE-
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHHHHHHH---HhcC-
Confidence 78999999889999999999999999998888888653 64 689998874 22211111 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC---C----CCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 010044 396 EHEPVNNLLDAVKVIKPTILIGSSGVG---R----TFTKEVIEAMASFNEKPLILALS-NPT 449 (519)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~---g----~Ft~evv~~Ma~~~erPIIFaLS-NPt 449 (519)
.....+|.+ +++|++|-++..| . .+..+.++ +..+||=+. ||.
T Consensus 168 -~~~~~~l~~----l~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 168 -VISYDELSN----LKGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp -EEEHHHHTT----CCCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred -cccHHHHHh----ccCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 001122333 2699999877543 1 24445442 567888775 664
No 66
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.43 E-value=0.11 Score=45.60 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=54.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhcc-ccCCCCCHH
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~-~~~~~~~L~ 404 (519)
+.+...+|+|+|+|..|..+|+.+... | .+++++|++- .+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~-----g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSS-----G-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 345678999999999999999988652 4 3688998752 2211121 11111111 111111233
Q ss_pred HH-hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 405 DA-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 405 ea-v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
++ ++ ++|++|-+.... ..+..+++.+...+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 44 489999776643 333444444333355555555555
No 67
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.39 E-value=0.17 Score=48.26 Aligned_cols=109 Identities=15% Similarity=0.215 Sum_probs=62.3
Q ss_pred hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc--ccCCccCCc-hhchhhcccc--CC
Q 010044 325 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 399 (519)
Q Consensus 325 ~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi--~~~R~~~l~-~~k~~fa~~~--~~ 399 (519)
...++...||.|+|+|..|.++|..|... | -+++++|++--- .......+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999999763 5 368888875211 000000000 0012232221 12
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH-HcCCCCcEEEEcCCCC
Q 010044 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 449 (519)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~M-a~~~erPIIFaLSNPt 449 (519)
..++.|+++. +|++| ++..+ ....++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~-~~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEG-ASSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCG-GGHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCc-HHHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3579999987 89887 44333 2334666666 3333677999999974
No 68
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.35 E-value=0.65 Score=46.47 Aligned_cols=121 Identities=15% Similarity=0.103 Sum_probs=81.5
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhc
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 358 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~ 358 (519)
..++|.|--- +.+|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 3566666433 23344578888888764 35689999999999999999999998643
Q ss_pred CCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHH
Q 010044 359 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 434 (519)
Q Consensus 359 G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~Ma 434 (519)
|+ +++.+|+.. . . . ..+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~--~-~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I--R-E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C--H-H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c--h-h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 54 688888641 1 0 0 011 11 0011379999986 898885432 33678899999886
Q ss_pred cCCCCcEEEEcCC
Q 010044 435 SFNEKPLILALSN 447 (519)
Q Consensus 435 ~~~erPIIFaLSN 447 (519)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678887877
No 69
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.34 E-value=0.08 Score=52.57 Aligned_cols=100 Identities=13% Similarity=0.302 Sum_probs=64.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccC----CchhchhhccccCC---CCCHH
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHEHEP---VNNLL 404 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~----l~~~k~~fa~~~~~---~~~L~ 404 (519)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++.+. +... ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 54 2499999852 21110 1110 111111111 1456
Q ss_pred HHhcccCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 405 DAVKVIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
++++. +|++|=+.+.+. .+.+++++.+.++++.-+|+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 77876 898886554332 134678888888888999999999974
No 70
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.31 E-value=0.17 Score=50.74 Aligned_cols=120 Identities=15% Similarity=0.253 Sum_probs=74.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~v 410 (519)
.||.|+|||..|.++|..++.. |+ ...++|+|.+-= ..+...++.. +..+ .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998653 54 268999998631 1111111221 2111 0111467 77887
Q ss_pred CCcEEEeccCCC--C-----------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEcC
Q 010044 411 KPTILIGSSGVG--R-----------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (519)
Q Consensus 411 kptvLIG~S~~~--g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aifAsG 472 (519)
+|++|=+.+.+ | -.-+++++.|.++++.-+|+-.|||.. +..+-+++.+. -.-+|++|
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rviG~g 150 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVIGIG 150 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEEECT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHeeCCC
Confidence 99998655443 1 024678888999999999888999973 44445545321 23467776
No 71
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.30 E-value=0.56 Score=50.37 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=76.5
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCC
Q 010044 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 401 (519)
Q Consensus 323 k~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~ 401 (519)
|..+..+.+.+|+|+|+|..|.++|+.+... |. +++++|++- . +...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~~----~--------~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEIDP----I--------NALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH----H--------HHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H--------HHHHHHHcCCEEe
Confidence 4566788999999999999999999988642 52 688888631 1 1111211 11124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010044 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (519)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~ 461 (519)
++.++++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888876 99999998888899999999996 567887777765 4666655443
No 72
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.30 E-value=0.047 Score=54.60 Aligned_cols=126 Identities=17% Similarity=0.279 Sum_probs=72.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC-CCHHHHhccc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV-NNLLDAVKVI 410 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~-~~L~eav~~v 410 (519)
.||.|+|||..|.++|..+... |+ ...++++|.+--..+....++.+. .++....-.+ .+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999777543 54 257999998621111000012111 1111100000 234567776
Q ss_pred CCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcCC
Q 010044 411 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (519)
Q Consensus 411 kptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsGS 473 (519)
+|++|=+.+.+. ...+++++.|.++++.-++|-.|||. . .+.+-+++.+ .-.-+|++|.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv--~-~~~~~~~~~s~~p~~rviG~gt 149 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV--D-ILTYATWKFSGLPHERVIGSGT 149 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH--H-HHHHHHHHHHTCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch--H-HHHHHHHHHhCCCHHHEEeccc
Confidence 999986544442 23467888888888888888899997 2 2333444432 1124666654
No 73
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.98 E-value=0.081 Score=53.29 Aligned_cols=127 Identities=17% Similarity=0.268 Sum_probs=76.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC---CCHHHHhc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 408 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~---~~L~eav~ 408 (519)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+-=..+.-...+.+...++.. ...+ .++ ++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-----g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~-~~~i~~t~d~-~al~ 81 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-----DL------GDVYMFDIIEGVPQGKALDLNHCMALIGS-PAKIFGENNY-EYLQ 81 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECSSTTHHHHHHHHHHHHHHHHTC-CCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCHHHHHHHHHHHHhHhhccCC-CCEEEECCCH-HHHC
Confidence 5899999999999999887653 54 13999998521111000011111111111 1111 467 7888
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcC
Q 010044 409 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 472 (519)
Q Consensus 409 ~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsG 472 (519)
. +|++|=+.+.+ |. +.+++.+.+.++++.-+|+--|||.+. ..+-+.+.+ ...-+|++|
T Consensus 82 ~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 82 N--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA---MVYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp T--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGEEESC
T ss_pred C--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH---HHHHHHHhcCCChhhEEEeC
Confidence 7 89988554322 21 246788888888888887767999742 234444433 345678888
Q ss_pred CCCC
Q 010044 473 SPFD 476 (519)
Q Consensus 473 SPf~ 476 (519)
++.+
T Consensus 157 t~Ld 160 (328)
T 2hjr_A 157 GVLD 160 (328)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 6665
No 74
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=92.95 E-value=0.39 Score=48.25 Aligned_cols=113 Identities=15% Similarity=0.166 Sum_probs=71.7
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch-hchhhcccc
Q 010044 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAHEH 397 (519)
Q Consensus 319 l~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~-~k~~fa~~~ 397 (519)
+++-.+..+ ...++.|+|+|..|-.+++.+... .+ -++|+++|+. +.+.+.. .+..+--+.
T Consensus 111 laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~------~a~~la~~l~~~~g~~~ 172 (313)
T 3hdj_A 111 LAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FA------LEAILVHDPY------ASPEILERIGRRCGVPA 172 (313)
T ss_dssp HHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECTT------CCHHHHHHHHHHHTSCE
T ss_pred HHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CC------CcEEEEECCc------HHHHHHHHHHHhcCCeE
Confidence 444444333 467999999999999988887653 23 2789999986 2121211 111111111
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHHH
Q 010044 398 EPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 459 (519)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~E~tpe~A 459 (519)
... ++.|+++. +|++|-++... .+|..+++ .+..+|..++. |. +-|+.++-.
T Consensus 173 ~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 173 RMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp EEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred EEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 223 89999997 99999776433 35665443 36789998876 44 589998754
No 75
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.94 E-value=0.18 Score=48.47 Aligned_cols=104 Identities=22% Similarity=0.264 Sum_probs=65.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
.|++.+++-.|.++++ +++|+|+|.+|..+|..+... |. +++++|++ .++ .....+.|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~-----g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALREA-----GL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 999999999999999887652 42 58888874 111 1111112211
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 010044 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRTFT--KEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~erPIIFaLSN 447 (519)
. ..++.++ +. +|++|-+...+ ... ++++. .....+..+|+-++.
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~-~~~~~~~~l~-~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG-LEDPSASPLP-AELFPEEGAAVDLVY 207 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT-TTCTTCCSSC-GGGSCSSSEEEESCC
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC-CCCCCCCCCC-HHHcCCCCEEEEeec
Confidence 1 3467777 54 99999776644 211 01221 122235568877763
No 76
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.91 E-value=0.094 Score=52.76 Aligned_cols=123 Identities=19% Similarity=0.251 Sum_probs=76.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCcc----CCchhchhhccccCCC---CCHH
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLL 404 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~fa~~~~~~---~~L~ 404 (519)
.||.|+|||+.|.++|.+++.. |+- +++++|.+ .++-+ .+.+.. .+......+ .++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~-~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTN-VMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHH-HHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhh-hhcCCCcEEEECCCH-
Confidence 4899999999999999988763 541 39999975 22111 111111 111111111 467
Q ss_pred HHhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--
Q 010044 405 DAVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS-- 463 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt-- 463 (519)
++++. +|++|=+.+.+ |. +-+++.+.|.++++.-+|+-.|||.... .+-+.+.+
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~---t~~~~~~~g~ 142 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM---VQLLHQHSGV 142 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHH---HHHHHHHHCC
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHH---HHHHHHhcCC
Confidence 78887 99988654333 31 3577888888889888887789998432 34444444
Q ss_pred CCcEEEEcCCCCC
Q 010044 464 KGRAIFASGSPFD 476 (519)
Q Consensus 464 ~G~aifAsGSPf~ 476 (519)
...-+|++|...+
T Consensus 143 ~~~rviG~gt~ld 155 (322)
T 1t2d_A 143 PKNKIIGLGGVLD 155 (322)
T ss_dssp CGGGEEECCHHHH
T ss_pred ChHHEEeccCccc
Confidence 3455788875444
No 77
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.90 E-value=0.094 Score=53.00 Aligned_cols=127 Identities=15% Similarity=0.262 Sum_probs=75.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
..||.|+|||..|..+|-+|+.. ++ ...++|+|.+-=-.++...+|.+.. +|..+..-..+-.+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999998887543 44 2689999984100000000122211 232211001244777887
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcCC
Q 010044 411 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (519)
Q Consensus 411 kptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsGS 473 (519)
+|++|=+.+.+.. +-+++++.|.+++...+|+-.|||.. .+.+-+++.+ .-.-+|++|.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~---~~t~~~~k~s~~p~~rviG~gt 151 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD---ILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHHHcCCCHHHEEEccc
Confidence 9999866554421 22456777888899999999999972 3444455543 1124667654
No 78
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.89 E-value=0.83 Score=45.81 Aligned_cols=122 Identities=14% Similarity=0.156 Sum_probs=78.5
Q ss_pred CCCceeecCCc---chhHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDIQ---GTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~~---------------------g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (519)
..++|.|---- .+|=-+++.+|+..|-. |..|.+.+|.|+|+|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 46777775432 33444788888877621 356889999999999999999998854
Q ss_pred HHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHH
Q 010044 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (519)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~ev 429 (519)
.|+ +++.+|+.. .+ ....+ .+ .... .++.|+++. +|+++=.-. ..++++++.
T Consensus 177 ----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~~-~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAEF-VSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSS----CC---HHHHH-TT--TCEE-CCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCC----cc---hhHHH-hc--Ccee-CCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 253 588888641 11 11111 11 0011 278898886 898874432 235788888
Q ss_pred HHHHHcCCCCcEEEEcCC
Q 010044 430 IEAMASFNEKPLILALSN 447 (519)
Q Consensus 430 v~~Ma~~~erPIIFaLSN 447 (519)
++.|. +..++.-.|.
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 88885 4567766665
No 79
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=92.87 E-value=0.059 Score=53.59 Aligned_cols=126 Identities=15% Similarity=0.234 Sum_probs=74.5
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec--CCccccCCccCCchhchhhccccCCCCCHHHHhc
Q 010044 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (519)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs--~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~ 408 (519)
.||+|.| ||..|..++..|+. .|+ ...++|+|. +---.+.-..+|.+... +..+..-..+-.++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~~~a~~ 69 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGGYEDTA 69 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECCGGGGT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCCHHHhC
Confidence 3899999 99999999988764 243 256999997 31000000001222111 1111000012267787
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcC
Q 010044 409 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 472 (519)
Q Consensus 409 ~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsG 472 (519)
+ +|++|=+.+.+ |. .++++++.|.+++.+.+|+--|||. ....+-+++.+ .-.-+|++|
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv---~~~~~~~~~~~~~p~~rviG~g 144 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV---DLLNRHLYEAGDRSREQVIGFG 144 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH---HHHHHHHHHHSSSCGGGEEECC
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH---HHHHHHHHHHcCCCHHHeeecc
Confidence 6 99998666544 22 4678889999999999999999996 23444444443 112467775
Q ss_pred C
Q 010044 473 S 473 (519)
Q Consensus 473 S 473 (519)
.
T Consensus 145 t 145 (303)
T 1o6z_A 145 G 145 (303)
T ss_dssp H
T ss_pred c
Confidence 3
No 80
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.83 E-value=0.048 Score=54.75 Aligned_cols=111 Identities=13% Similarity=0.067 Sum_probs=67.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC--Ccc--ccCCccCCchhchhhccccCCCCCHHHH
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~--GLi--~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (519)
.||+|.|| |..|..++..|+.. |+-...-...++++|.+ ..- .++...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~-----~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG-----DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT-----TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC-----CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 99999998877652 43100112479999975 100 0000001211111222221222578999
Q ss_pred hcccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 407 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 407 v~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
+++ .|++|=+.+.+ | ..++++++.+.+++ .+.+|+-.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 997 89988555544 2 13568889999986 787777789997
No 81
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.75 E-value=0.09 Score=52.66 Aligned_cols=128 Identities=14% Similarity=0.270 Sum_probs=76.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-cccCCCCCHHHHhc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 408 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-~~~~~~~~L~eav~ 408 (519)
...||.|+|||..|..+|-.|+.. |+ ...++++|.+-=..++...+|.+. .+|. .+..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999998887642 54 268999997520001100012222 2333 11000014477788
Q ss_pred ccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcC
Q 010044 409 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 472 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsG 472 (519)
+ +|++|=+.+.+.. +=+++++.|.++++.-+|+-.|||. -...+-+++.+ .-.-+|++|
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~t~~~~k~~~~p~~rviG~g 148 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV---DILAYATWKFSGLPKERVIGSG 148 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECT
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHhCCCHHHEEecC
Confidence 7 9999865554421 1246777788899999999999996 23444455543 122467776
Q ss_pred C
Q 010044 473 S 473 (519)
Q Consensus 473 S 473 (519)
.
T Consensus 149 t 149 (317)
T 3d0o_A 149 T 149 (317)
T ss_dssp T
T ss_pred c
Confidence 4
No 82
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.74 E-value=0.11 Score=52.14 Aligned_cols=126 Identities=13% Similarity=0.241 Sum_probs=74.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
.||.|+|||..|..+|-+|+.. ++ ...|+|+|.+-=-.++-..+|.+.. +|..+..-..+..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999998887653 44 2689999984100000000122211 233211001244677887
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcCC
Q 010044 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (519)
Q Consensus 412 ptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsGS 473 (519)
+|++|=+.+.+.. +-+++++.|.+++...+|+-.|||.. ...+-+++.+ .-.-+|++|.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~---~~t~~~~k~s~~p~~rviG~gt 147 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD---ILTYATWKFSGFPKERVIGSGT 147 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGEEECTT
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHH---HHHHHHHHHcCCCHHHEEeccc
Confidence 9999855544321 23457777888999999999999972 3444555543 1224677764
No 83
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=92.61 E-value=0.12 Score=55.01 Aligned_cols=106 Identities=16% Similarity=0.276 Sum_probs=67.3
Q ss_pred cccceEEEeCcchH--HHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc---cCCCCCH
Q 010044 329 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---HEPVNNL 403 (519)
Q Consensus 329 l~d~riv~~GAGsA--g~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~---~~~~~~L 403 (519)
.++.||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- ++-+.+....+.+.+. -.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888752 122 2 3899999751 1100010000111110 0112589
Q ss_pred HHHhcccCCcEEEeccCCC---------------CC---------------------CCHHHHHHHHcCCCCcEEEEcCC
Q 010044 404 LDAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 404 ~eav~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
.||+++ +|++|=.-.+| |. .-.++++.|.++++.-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 99888444322 22 13577888889999999999999
Q ss_pred CC
Q 010044 448 PT 449 (519)
Q Consensus 448 Pt 449 (519)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 84
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.51 E-value=0.19 Score=49.68 Aligned_cols=48 Identities=33% Similarity=0.392 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
.|++.+++-.|.++++.|++++|||-|+-+|+-.|.+. |. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~~-----g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEA-----GI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHHh-----CC------CeEEEeCC
Confidence 46788899899999999999999999999998877653 64 68999987
No 85
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.45 E-value=0.067 Score=45.03 Aligned_cols=103 Identities=13% Similarity=0.173 Sum_probs=53.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH-
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 406 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea- 406 (519)
++..+|+|+|+|..|..+++.+... | .+++++|++- ++.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~-----g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRM-----G-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHT-----T-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 4567899999999999999888652 5 2577888742 111111111001111 11111123333
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 489999665532012223444444445556777677665
No 86
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.43 E-value=0.11 Score=50.31 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 46678999999999999999999875 65 6899999874
No 87
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.39 E-value=1.3 Score=44.47 Aligned_cols=120 Identities=14% Similarity=0.169 Sum_probs=76.0
Q ss_pred CCceeecCCc---chhHHHHHHHHHHHHH-------------------------hCCCcccceEEEeCcchHHHHHHHHH
Q 010044 299 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------------IGGTLAEHRFLFLGAGEAGTGIAELI 350 (519)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~-------------------------~g~~l~d~riv~~GAGsAg~GIA~ll 350 (519)
.|+|.|---- .+|=-+++.+|+..|- .|..|.+.+|.|+|+|..|..+|+.+
T Consensus 90 gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l 169 (334)
T 2dbq_A 90 GIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRA 169 (334)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred CCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHH
Confidence 4566664322 2344467777777652 14578899999999999999999998
Q ss_pred HHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCC
Q 010044 351 ALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFT 426 (519)
Q Consensus 351 ~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft 426 (519)
... |. +++.+|+.. .. + .. ..+ .-...+|.++++. +|+++=.-. ..++++
T Consensus 170 ~~~-----G~-------~V~~~d~~~----~~-~---~~-~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i~ 223 (334)
T 2dbq_A 170 KGF-----NM-------RILYYSRTR----KE-E---VE-REL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLIN 223 (334)
T ss_dssp HHT-----TC-------EEEEECSSC----CH-H---HH-HHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCBC
T ss_pred HhC-----CC-------EEEEECCCc----ch-h---hH-hhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhhC
Confidence 642 53 688888742 11 0 00 011 0012478888886 888774421 125777
Q ss_pred HHHHHHHHcCCCCcEEEEcCC
Q 010044 427 KEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 427 ~evv~~Ma~~~erPIIFaLSN 447 (519)
++.++.|. +..+|.-.|.
T Consensus 224 ~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 224 EERLKLMK---KTAILINIAR 241 (334)
T ss_dssp HHHHHHSC---TTCEEEECSC
T ss_pred HHHHhcCC---CCcEEEECCC
Confidence 88888885 5667776664
No 88
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.36 E-value=0.13 Score=51.34 Aligned_cols=121 Identities=17% Similarity=0.337 Sum_probs=70.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch---hchhhccccC-CCCCHHHHhc
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAHEHE-PVNNLLDAVK 408 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~---~k~~fa~~~~-~~~~L~eav~ 408 (519)
||.|+|||+.|.++|..++.. |. ...++++|.+- ++.+.+.. +-.++..... ...+ .++++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~ 66 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KRAEGDALDLIHGTPFTRRANIYAGD-YADLK 66 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSCCCEEEECC-GGGGT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhC
Confidence 799999999999999988764 53 24799999851 11010100 0001110000 0124 35666
Q ss_pred ccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcC
Q 010044 409 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 472 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsG 472 (519)
. +|++|=+...+.. .-+++++.|.++++.-+|+-.|||... ..+-+.+.+ ...-+|++|
T Consensus 67 ~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~---~~~~~~~~~~~~~~rviG~~ 141 (319)
T 1a5z_A 67 G--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV---LTYFFLKESGMDPRKVFGSG 141 (319)
T ss_dssp T--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH---HHHHHHHHHTCCTTTEEECT
T ss_pred C--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH---HHHHHHHHhCCChhhEEeeC
Confidence 5 8988855443321 127888899888888888889999743 223333433 233456655
Q ss_pred C
Q 010044 473 S 473 (519)
Q Consensus 473 S 473 (519)
.
T Consensus 142 t 142 (319)
T 1a5z_A 142 T 142 (319)
T ss_dssp T
T ss_pred c
Confidence 3
No 89
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.23 E-value=0.69 Score=43.56 Aligned_cols=92 Identities=11% Similarity=0.207 Sum_probs=56.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
..||.|+|+|..|..+|..+... |.. ...+++++|++ .++ + ......++.++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999998764 420 01368888874 111 0 00112456677765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 77666 33323 356677777765545556777777664
No 90
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.22 E-value=0.14 Score=49.51 Aligned_cols=102 Identities=24% Similarity=0.310 Sum_probs=61.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccC---Cc-----cCCchhchh-----hc
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RK-----DSLQHFKKP-----WA 394 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~---R~-----~~l~~~k~~-----fa 394 (519)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+ ..+ |. +++-..|.. +.
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v-~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 92 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDV-HLSNLQRQILFTTEDIDRPKSQVSQQRLT 92 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBC-CGGGTTTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCc-ccccCCCCccCChhhCCCHHHHHHHHHHH
Confidence 56789999999999999999999875 75 68999998732 211 10 001111111 10
Q ss_pred cc---------cCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 010044 395 HE---------HEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 445 (519)
Q Consensus 395 ~~---------~~~~--~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (519)
+- .... .++.+.++. .|++|-++.. .-++..+...+.....|+|.+-
T Consensus 93 ~~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 93 QLNPDIQLTALQQRLTGEALKDAVAR--ADVVLDCTDN--MATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HHCTTSEEEEECSCCCHHHHHHHHHH--CSEEEECCSS--HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHCCCCEEEEEeccCCHHHHHHHHhc--CCEEEECCCC--HHHHHHHHHHHHHhCCCEEEEe
Confidence 00 0011 135566665 8888876542 2345566666666678888754
No 91
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.18 E-value=0.039 Score=53.75 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 5899999999999999999764 63 68888874
No 92
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=92.09 E-value=0.23 Score=50.70 Aligned_cols=114 Identities=15% Similarity=0.161 Sum_probs=71.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
++.+++..+. +....++.|+|+|..|..+++.+... .+. ++++++|+. .++ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455555553 24668999999999999998877543 232 678888873 222 2223333321
Q ss_pred --c--cCCCCCHHHHhcccCCcEEEeccCCC---CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHH
Q 010044 396 --E--HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAE 457 (519)
Q Consensus 396 --~--~~~~~~L~eav~~vkptvLIG~S~~~---g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~E~tpe 457 (519)
. .....++.|+++. +|++|=++..+ .+|+.+++ .+.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHH
Confidence 0 1224689999986 99999776543 23554333 24558888886 65 6788764
No 93
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=92.00 E-value=0.055 Score=57.29 Aligned_cols=127 Identities=13% Similarity=0.184 Sum_probs=78.2
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc---ccCC---CCCHH
Q 010044 332 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEP---VNNLL 404 (519)
Q Consensus 332 ~riv~~GAGsA-g~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~---~~~~---~~~L~ 404 (519)
.||.|+|||+. |.+++..|+.. ..++. ...++|+|.+-- .+|.+.+......+.. .... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 59999999997 55555555431 12442 367999998530 0111111111122211 1111 15789
Q ss_pred HHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 405 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
+++++ +|++|=+.++++. .=+++++.|.++++..+|+-.|||.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPv- 155 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA- 155 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH-
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH-
Confidence 99997 9999866665421 1358889999999999999999997
Q ss_pred CCCCCHHHHhcccCCcEEEEcC
Q 010044 451 QSECTAEEAYTWSKGRAIFASG 472 (519)
Q Consensus 451 ~~E~tpe~A~~wt~G~aifAsG 472 (519)
-+..+-+++.+.-.-+|++|
T Consensus 156 --divT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 156 --GMVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp --HHHHHHHHHHCCCCCEEECC
T ss_pred --HHHHHHHHHhCCCCCEEEeC
Confidence 24445555666433677776
No 94
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.98 E-value=0.17 Score=51.43 Aligned_cols=128 Identities=15% Similarity=0.253 Sum_probs=77.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (519)
...||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.....-..+..+++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 346899999999999999988764 54 258999998311011000012222 1332211111234567776
Q ss_pred cCCcEEEeccCCC---C-----CC------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEcCC
Q 010044 410 IKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (519)
Q Consensus 410 vkptvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aifAsGS 473 (519)
+|++|=+.+.+ | +| -+++++.|.+++++.+|+-.|||. .+..+-+++.+. -+-+|++|.
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv---di~t~~~~k~~g~p~~rviG~gt 151 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch---HHHHHHHHHhcCCCHHHeeeecc
Confidence 89887554433 1 23 358888999999999999999996 245555555541 234677753
No 95
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.96 E-value=0.18 Score=50.56 Aligned_cols=122 Identities=21% Similarity=0.348 Sum_probs=72.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCcc----CCchhchhhccccCCCCCHHHHh
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPVNNLLDAV 407 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~fa~~~~~~~~L~eav 407 (519)
.||.|+|||..|...|-+++.. |+ ...++++|.+ .++.+ +|.+.. +|.++..-..+-.+++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~ 72 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-----QT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGDYSDV 72 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--CGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECCHHHh
Confidence 5899999999999988887552 44 2589999975 22211 111111 1221110001226677
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEc
Q 010044 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFAS 471 (519)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAs 471 (519)
++ +|++|=+.+.+ |- +-+++++.|.++++.-+|+-.|||. -.+.+-+++.+ ...-+|++
T Consensus 73 ~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 73 KD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV---DIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp TT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH---HHHHHHHHHHHTCCTTTEEEC
T ss_pred CC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHcCCCHHHEecc
Confidence 76 99988555544 21 1268889999999999999999996 33344444443 12246666
Q ss_pred CC
Q 010044 472 GS 473 (519)
Q Consensus 472 GS 473 (519)
|.
T Consensus 148 gt 149 (318)
T 1y6j_A 148 GT 149 (318)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 96
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.80 E-value=0.27 Score=47.67 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-.|++.+++-.|.++++.+++|+|||.+|.++|..+.+. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567888888888899999999999999888888888653 4 368888874
No 97
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=91.79 E-value=0.17 Score=54.13 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=76.0
Q ss_pred cceEEEeCcchHH--HHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc---cccCC---CCC
Q 010044 331 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEP---VNN 402 (519)
Q Consensus 331 d~riv~~GAGsAg--~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa---~~~~~---~~~ 402 (519)
..||.|+|||+.| .++|..|+.. .++ +...++|+|.+- ++.+........+. ..... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4689999999964 5556676531 122 136799999853 21111111111111 11111 257
Q ss_pred HHHHhcccCCcEEEeccCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 010044 403 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 442 (519)
Q Consensus 403 L~eav~~vkptvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~erPII 442 (519)
+.+++++ +|++|=+.+. .|.|. +++++.|.+++...+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 9998855532 12333 6899999999999999
Q ss_pred EEcCCCCCCCCCCHHHHhcccCCcEEEEcC
Q 010044 443 LALSNPTSQSECTAEEAYTWSKGRAIFASG 472 (519)
Q Consensus 443 FaLSNPt~~~E~tpe~A~~wt~G~aifAsG 472 (519)
+-.|||. . +..+-+.++. ..-+|++|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p-~~rviG~c 174 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTV-PIKAVGFC 174 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHS-CSEEEEEC
T ss_pred EEeCCcH--H-HHHHHHHHCC-CCcEEecC
Confidence 9999997 2 3444555554 44677765
No 98
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.73 E-value=0.19 Score=51.40 Aligned_cols=96 Identities=18% Similarity=0.289 Sum_probs=63.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc----cCCCCCH
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~----~~~~~~L 403 (519)
.+...+++|+|+|..|..+|+.+... |. +++.+|+.. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 47889999999999999999988642 52 688888741 11 21111112110 0012357
Q ss_pred HHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 404 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 404 ~eav~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
.+.++. .|++|.+...+ .+++++.++.|. +.-+|.-+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 788876 99999876544 457899999886 4567766763
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.72 E-value=0.17 Score=48.04 Aligned_cols=99 Identities=14% Similarity=0.236 Sum_probs=61.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (519)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988764 53 2477887631 1121111111 00112467777
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
++. +|++|=+.. ... .+++++.+.+.. +..+|.-+||-.
T Consensus 66 ~~~--~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NPY--AKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CSC--CSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hcC--CCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 764 888884433 333 378888877543 567888888754
No 100
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.68 E-value=0.16 Score=50.81 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=75.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHHHhccc
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 410 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~eav~~v 410 (519)
||.|+|||..|.++|..|+.. |+ ...+.++|.+--..++-.-++.+...+|-.+. ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999888653 54 24799999753111100001222221121110 01135 788887
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEcC
Q 010044 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (519)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aifAsG 472 (519)
+|++|=+.+.+ |- .-+++++.|.+++++-+|+-.|||. .....-+++.+. -+-+|++|
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv---d~~t~~~~k~~g~p~~rviG~g 143 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKESGKPRNEVFGMG 143 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHHSCCCTTSEEECS
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc---hHHHHHHHHhcCCCHHHEeecc
Confidence 89887554433 32 1256778889999999999999996 244555555542 24466776
No 101
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=91.55 E-value=0.081 Score=56.41 Aligned_cols=126 Identities=17% Similarity=0.253 Sum_probs=78.3
Q ss_pred cceEEEeCcchH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-c--ccCC---CCCH
Q 010044 331 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNNL 403 (519)
Q Consensus 331 d~riv~~GAGsA-g~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-~--~~~~---~~~L 403 (519)
..||.|+|||+. +.++|..|+.. ..++. ...++|+|.+- ++.+.+......+. . .... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566666541 01432 35799999853 22111111112221 1 1111 1589
Q ss_pred HHHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 404 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
.+++++ +|++|=+.+.++. .=+++++.|.++++..+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999997 9999866554321 1358889999999999999999997
Q ss_pred CCCCCCHHHHhcccCCcEEEEcC
Q 010044 450 SQSECTAEEAYTWSKGRAIFASG 472 (519)
Q Consensus 450 ~~~E~tpe~A~~wt~G~aifAsG 472 (519)
-+..+-+++.+...-+|++|
T Consensus 175 ---di~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 ---AIVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp ---HHHHHHHHHHSTTCCEEECC
T ss_pred ---HHHHHHHHHhCCCCCEEEeC
Confidence 24445555655443677775
No 102
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.40 E-value=0.23 Score=48.32 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-.|++.+++-.|..++..+++|+|||.+|.++|..|.+. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 468888888888889999999999999999998888653 4 478888874
No 103
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.25 E-value=0.64 Score=47.41 Aligned_cols=101 Identities=19% Similarity=0.292 Sum_probs=62.3
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCC--------ccCCchhchhhccc--
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR--------KDSLQHFKKPWAHE-- 396 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R--------~~~l~~~k~~fa~~-- 396 (519)
.+|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=+ ..+. .+++-..|..-+.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~V-e~sNL~Rq~l~~~~diG~~Ka~~~~~~l 181 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQI-ENTNLTRQVLFSEDDVGKNKTEVIKREL 181 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCBC-CGGGGGTCTTCCGGGTTSBHHHHHHHHH
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCcC-cccccccccCCChHHCCChHHHHHHHHH
Confidence 457889999999999999999999876 65 78999998632 1110 00111111111110
Q ss_pred ---c---------CCC--CC-HHHHhcccCCcEEEeccCCCCCC-CHHHHHHHHcCCCCcEEEE
Q 010044 397 ---H---------EPV--NN-LLDAVKVIKPTILIGSSGVGRTF-TKEVIEAMASFNEKPLILA 444 (519)
Q Consensus 397 ---~---------~~~--~~-L~eav~~vkptvLIG~S~~~g~F-t~evv~~Ma~~~erPIIFa 444 (519)
. ..+ .+ +.+ ++. .|++|-++. +.- +...|...+.....|.|.+
T Consensus 182 ~~~np~v~v~~~~~~i~~~~~~~~-~~~--~DlVvd~~D--n~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 182 LKRNSEISVSEIALNINDYTDLHK-VPE--ADIWVVSAD--HPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp HHHCTTSEEEEEECCCCSGGGGGG-SCC--CSEEEECCC--CSTTHHHHHHHHHHHTTCCEEEE
T ss_pred HHHCCCCeEEEeecccCchhhhhH-hcc--CCEEEEecC--ChHHHHHHHHHHHHHhCCCEEEE
Confidence 0 111 11 444 554 888887653 223 6677777777778999875
No 104
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=91.17 E-value=0.11 Score=51.87 Aligned_cols=126 Identities=19% Similarity=0.311 Sum_probs=73.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
.||.|+|||+.|..+|-+|+.. ++ ...++|+|.+-=-.++...+|.+. .+|.++..-..+-.+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~~~a~~~-- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGSYGDLEG-- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECCHHHhCC--
Confidence 3899999999999988877552 43 258999998520000000012211 1222211000123677876
Q ss_pred CcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcCC
Q 010044 412 PTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (519)
Q Consensus 412 ptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsGS 473 (519)
+|++|=+.+.+ |- .-+++++.|.+++...+|+-.|||. -.+.+-+++.+ .-.-+|++|.
T Consensus 68 aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 142 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV---DVMTQVAYALSGLPPGRVVGSGT 142 (310)
T ss_dssp EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHTCCGGGEEECTT
T ss_pred CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHHcCCCHHHEEecCc
Confidence 99998554443 32 2246777788889999999999996 23334444432 1124667754
No 105
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=91.12 E-value=1.3 Score=45.21 Aligned_cols=122 Identities=16% Similarity=0.166 Sum_probs=83.1
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (519)
..|+|.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 3566666432 23555678888877763 25678999999999999999999998642
Q ss_pred HHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHH
Q 010044 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (519)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~ev 429 (519)
|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- ..++|+++.
T Consensus 196 -----G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 54 6888887521 000 01111112589999987 899884432 236899999
Q ss_pred HHHHHcCCCCcEEEEcCCC
Q 010044 430 IEAMASFNEKPLILALSNP 448 (519)
Q Consensus 430 v~~Ma~~~erPIIFaLSNP 448 (519)
++.|. +..|+.=.|.-
T Consensus 250 l~~mk---~gailIN~aRG 265 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRG 265 (345)
T ss_dssp HHHSC---TTEEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 99996 67788877763
No 106
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.11 E-value=0.18 Score=50.25 Aligned_cols=123 Identities=19% Similarity=0.242 Sum_probs=70.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC---CCCHHHHhc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 408 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~---~~~L~eav~ 408 (519)
.||.|+|||..|.++|-.++. .|+ . + ++++|.+-=-.+....+|.+...+.... .. ..++ ++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~-~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~-~~i~~t~d~-~a~~ 69 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G-D-IVLLDIVEGVPQGKALDLYEASPIEGFD-VRVTGTNNY-ADTA 69 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S-E-EEEECSSSSHHHHHHHHHHTTHHHHTCC-CCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C-e-EEEEeCCccHHHHHHHhHHHhHhhcCCC-eEEEECCCH-HHHC
Confidence 489999999999999998865 253 1 3 9999975100000000121111111111 11 1466 7788
Q ss_pred ccCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEEcC
Q 010044 409 VIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 472 (519)
Q Consensus 409 ~vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~aifAsG 472 (519)
. +|++|=+.+.+. ...+++.+.+.+++++-+|+--|||.. .+.+-+++.+ .-.-+|++|
T Consensus 70 ~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~---~~t~~~~~~~~~~~~rviG~g 144 (309)
T 1ur5_A 70 N--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLD---AMTYLAAEVSGFPKERVIGQA 144 (309)
T ss_dssp T--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHH---HHHHHHHHHHCCCGGGEEECC
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchH---HHHHHHHHHcCCCHHHEEECC
Confidence 7 999986654432 122477888888888888888899973 2233444432 112467776
No 107
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.10 E-value=0.17 Score=49.50 Aligned_cols=105 Identities=14% Similarity=0.271 Sum_probs=62.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhccccC-CC-CCHHHHh
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEHE-PV-NNLLDAV 407 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~~~~-~~-~~L~eav 407 (519)
..||.|+|||+.|..+|..|... |. ...++++|++---.+. ..++ .+..++..+.. .. .+ .+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~-~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDD-PEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESC-GGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCC-HHHh
Confidence 36899999999999999988653 53 1479999986310000 0010 01111211100 00 13 3556
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
+. +|++|=+...+.. +-+++++.|+++++..+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 64 8988855443321 11178888888788889999999973
No 108
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.07 E-value=1 Score=45.57 Aligned_cols=91 Identities=15% Similarity=0.254 Sum_probs=63.8
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 010044 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (519)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (519)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. .. .+ ....+|.|
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~dr~~----~~---~~----g~----~~~~~l~e 211 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PISYFSRSK----KP---NT----NY----TYYGSVVE 211 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC----CT---TC----CS----EEESCHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEECCCc----hh---cc----Cc----eecCCHHH
Confidence 457889999999999999999998864 253 588888642 11 11 01 11257899
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010044 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 448 (519)
Q Consensus 406 av~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (519)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.-
T Consensus 212 ll~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~srG 253 (333)
T 3ba1_A 212 LASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIGRG 253 (333)
T ss_dssp HHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECSCG
T ss_pred HHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 898875421 23688889999885 56788777764
No 109
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=91.05 E-value=0.59 Score=46.40 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=66.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
++.+++..+. +....+|.|+|+|..|..+++.+... .|. ++++++|+. .++ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3445553332 45677999999999999999988653 243 578888863 111 2222222110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHHHh
Q 010044 396 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEAY 460 (519)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~E~tpe~A~ 460 (519)
......++.|+++. +|++|=+... ..+|.++ ...+..+|+.+|+ |. .-|+.+ ++.
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~-~~~ 240 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD-ELM 240 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH-HHH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH-HHH
Confidence 01124689999986 8988855432 2234432 1235668888853 54 356654 443
No 110
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.98 E-value=0.19 Score=43.42 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 499999999999999999763 75 57788864
No 111
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.90 E-value=1.1 Score=43.55 Aligned_cols=82 Identities=21% Similarity=0.199 Sum_probs=57.0
Q ss_pred eeecCCCccHHHHHHHHcC------CCceeecCCcchhHHHHHHHHHHHHHh-CCCcccceEEEeC-cchHHHHHHHHHH
Q 010044 280 QFEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIA 351 (519)
Q Consensus 280 qfEDf~~~~af~iL~ryr~------~~~~FnDDiQGTaaV~LAgll~Alk~~-g~~l~d~riv~~G-AGsAg~GIA~ll~ 351 (519)
.++-+.-..+.+++++-+. +..+|. |..|.- ..-.|++.+++-. +.++++.+++|.| +|.+|.+++..+.
T Consensus 63 ~~~G~~~~~~~~~~~~~~~~~~gavnt~~~~-~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~ 140 (287)
T 1lu9_A 63 FVGGGDMAAGERVFEAVKKRFFGPFRVSCML-DSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLA 140 (287)
T ss_dssp EEECSCHHHHHHHHHHHHHHCBTTBCCEEEE-CSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHH
T ss_pred EEccchHHHHHHHHHHHHHhcCCCeEEEEec-CCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 3454445577777777652 333444 455532 3456777888776 7889999999999 9999999998887
Q ss_pred HHHHhhcCCChhhhcCcEEEEecC
Q 010044 352 LEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 352 ~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+. |. +++++|++
T Consensus 141 ~~-----G~-------~V~i~~R~ 152 (287)
T 1lu9_A 141 GE-----GA-------EVVLCGRK 152 (287)
T ss_dssp HT-----TC-------EEEEEESS
T ss_pred HC-----cC-------EEEEEECC
Confidence 53 53 38888874
No 112
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.80 E-value=0.095 Score=52.78 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 36899999999999999999764 64 57888874
No 113
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=90.80 E-value=0.8 Score=45.83 Aligned_cols=112 Identities=20% Similarity=0.176 Sum_probs=69.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
++.+++..+.. ....++.|+|+|..|-.+++.+... .+ .++++++|+. .++ .....+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FD------IGEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CC------ccEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555555432 3567999999999999998887653 23 2678888873 222 2223333321
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCHH
Q 010044 396 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAE 457 (519)
Q Consensus 396 ---~~~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~~E~tpe 457 (519)
... ..++.|++ . .|++|=++..+ ..++.+++ .+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46899999 5 99998776533 24443332 2566899983 455 6888764
No 114
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.74 E-value=0.29 Score=45.84 Aligned_cols=93 Identities=13% Similarity=0.181 Sum_probs=57.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEE-EecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~l-vDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
.||.|+|+|..|..+|..+.+. |. ++.+ +|++ .+.+....+.+-. ....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999998763 53 3444 5542 1122222222210 111345566765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
+|++| ++..+ ...+++++.++. .+..+|+.++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88887 33333 466777777765 45669999999974
No 115
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=90.69 E-value=1.2 Score=44.27 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEE
Q 010044 310 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 371 (519)
Q Consensus 310 TaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~l 371 (519)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 444567777776652 34678999999999999999999988642 53 6888
Q ss_pred EecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 372 VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 372 vDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
+|+.. +. ...+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +..++.=.|.
T Consensus 171 ~d~~~-------~~-~~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ar 233 (307)
T 1wwk_A 171 YDPYP-------NE-ERAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTSR 233 (307)
T ss_dssp ECSSC-------CH-HHHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred ECCCC-------Ch-hhHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECCC
Confidence 88641 10 0011 11 0011379999986 898885421 23688899999986 5678887776
No 116
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=90.61 E-value=0.26 Score=51.68 Aligned_cols=124 Identities=12% Similarity=0.165 Sum_probs=77.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHh-hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc---CCCCCHHHHh
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 407 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~-~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~---~~~~~L~eav 407 (519)
.||.|+|||+. .+..++..+.. ..++. ...++|+|.+- +|.+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 55555444443 23442 36799999753 22110111111111111 1125788999
Q ss_pred cccCCcEEEeccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 010044 408 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 453 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIFaLSNPt~~~E 453 (519)
++ +|++|=..++++ ++ =.++++.|.+++ ..+|+-.|||. -
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv---d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS---G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH---H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH---H
Confidence 98 999997776653 22 358999999999 99999999997 2
Q ss_pred CCHHHHhcccCCcEEEEcC
Q 010044 454 CTAEEAYTWSKGRAIFASG 472 (519)
Q Consensus 454 ~tpe~A~~wt~G~aifAsG 472 (519)
+..+-+++.+.-.-+|++|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 4445556666433677776
No 117
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.60 E-value=3.6 Score=43.27 Aligned_cols=137 Identities=13% Similarity=0.196 Sum_probs=91.8
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
..|+|||--- ..+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 102 ~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~--- 178 (416)
T 3k5p_A 102 RGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL--- 178 (416)
T ss_dssp TTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred cCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC---
Confidence 5788888643 34555678888887753 24678999999999999999999988643
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHH
Q 010044 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 432 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~ 432 (519)
|+ +++.+|+.. + .... -+ ....+|.|+++. .|+++=.-- ..+.|+++.++.
T Consensus 179 --G~-------~V~~yd~~~-----~---~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~~ 233 (416)
T 3k5p_A 179 --GM-------TVRYYDTSD-----K---LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLRK 233 (416)
T ss_dssp --TC-------EEEEECTTC-----C---CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHHH
T ss_pred --CC-------EEEEECCcc-----h---hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHhh
Confidence 64 688888741 1 1100 01 123689999987 999874321 236899999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcE
Q 010044 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRA 467 (519)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~a 467 (519)
|. +..++.=.|.-..--|-.-.+|++ .|+.
T Consensus 234 mk---~gailIN~aRG~vvd~~aL~~aL~--~g~i 263 (416)
T 3k5p_A 234 MK---KGAFLINNARGSDVDLEALAKVLQ--EGHL 263 (416)
T ss_dssp SC---TTEEEEECSCTTSBCHHHHHHHHH--TTSE
T ss_pred CC---CCcEEEECCCChhhhHHHHHHHHH--cCCc
Confidence 96 678888888754223333334443 4654
No 118
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.59 E-value=0.22 Score=50.41 Aligned_cols=126 Identities=15% Similarity=0.285 Sum_probs=74.7
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC---CCHHH
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 405 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~---~~L~e 405 (519)
++..||.|+|||..|.++|.+|+.. |+ + .+.++|.+-=..++-..+|.+. ..|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~-----~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK-----EL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 4567999999999999999888753 65 1 5999998521111000012221 1122111111 344 7
Q ss_pred HhcccCCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEE
Q 010044 406 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIF 469 (519)
Q Consensus 406 av~~vkptvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aif 469 (519)
++++ +|++|=+.+.+ |. | -+++++.|.++++.-+|+-.|||. .+...-+++.+. -+-+|
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv---d~~t~~~~k~sg~p~~rvi 146 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL---DAMVWALQKFSGLPAHKVV 146 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc---HHHHHHHHHhcCCCHHHEE
Confidence 8887 99887554432 32 2 256778888899999999999996 233334444431 13467
Q ss_pred EcC
Q 010044 470 ASG 472 (519)
Q Consensus 470 AsG 472 (519)
++|
T Consensus 147 G~~ 149 (324)
T 3gvi_A 147 GMA 149 (324)
T ss_dssp ECC
T ss_pred eec
Confidence 777
No 119
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.58 E-value=0.37 Score=48.33 Aligned_cols=104 Identities=21% Similarity=0.290 Sum_probs=65.5
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhh-ccccCCCCCHHHHhcc
Q 010044 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-AHEHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~f-a~~~~~~~~L~eav~~ 409 (519)
.||+|.| +|..|..++..|++ .|+ ...++++|.+-- .....+|.+...+. .+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999888753 253 256999996421 00000011100000 0000001267889987
Q ss_pred cCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 410 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 410 vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
+|++|=+.+.+. ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886655442 24678888888888899999999997
No 120
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.56 E-value=0.18 Score=50.82 Aligned_cols=124 Identities=19% Similarity=0.267 Sum_probs=73.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC--CCHHHHhccc
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav~~v 410 (519)
||.|+|||..|.++|..|+.. |+ .+.+.++|.+--..++-.-+|.+. ..+......+ .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 54 258999998531111100012221 1121111111 245678887
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEcC
Q 010044 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (519)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aifAsG 472 (519)
+|++|=+.+.+ |- +-+++++.+.++++..+|+-.|||. ..+..-+++.+. -+-+|++|
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~~g~p~~rviG~~ 143 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL---DVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH---HHHHHHHHHHHTCCGGGEEECC
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch---hHHHHHHHHhcCCChHHEEeec
Confidence 99887444433 21 1256778888999999999999996 333344444431 23456666
No 121
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.55 E-value=1.7 Score=43.70 Aligned_cols=119 Identities=11% Similarity=0.127 Sum_probs=81.4
Q ss_pred CCCceeecCCcc---hhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (519)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (519)
..|+|.|---.. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 91 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (331)
T 1xdw_A 91 LGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGM-- 168 (331)
T ss_dssp TTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 467777753333 344478888877761 23468899999999999999999988642
Q ss_pred hhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 010044 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (519)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~ 431 (519)
|+ +++.+|+.. .. .+ + .++. ..+|.|+++. .|+++=.- ...++++++.++
T Consensus 169 ---G~-------~V~~~d~~~----~~--~~---~-~~~~----~~~l~ell~~--aDvV~~~~p~t~~t~~li~~~~l~ 222 (331)
T 1xdw_A 169 ---GA-------TVIGEDVFE----IK--GI---E-DYCT----QVSLDEVLEK--SDIITIHAPYIKENGAVVTRDFLK 222 (331)
T ss_dssp ---TC-------EEEEECSSC----CC--SC---T-TTCE----ECCHHHHHHH--CSEEEECCCCCTTTCCSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----cH--HH---H-hccc----cCCHHHHHhh--CCEEEEecCCchHHHHHhCHHHHh
Confidence 64 588888742 11 11 1 1111 2379999986 89988641 224689999999
Q ss_pred HHHcCCCCcEEEEcCC
Q 010044 432 AMASFNEKPLILALSN 447 (519)
Q Consensus 432 ~Ma~~~erPIIFaLSN 447 (519)
.|. +..++.=.|.
T Consensus 223 ~mk---~ga~lin~sr 235 (331)
T 1xdw_A 223 KMK---DGAILVNCAR 235 (331)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 986 5778888884
No 122
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.32 E-value=0.31 Score=48.36 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=61.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCC----chhchhhcccc--CCCCCHHHH
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWAHEH--EPVNNLLDA 406 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l----~~~k~~fa~~~--~~~~~L~ea 406 (519)
||.|+|||..|.++|..+... ++ -.+++++|.+- ++.+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999987652 22 25799999852 211111 11100011110 01145655
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 407 v~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
++. +|++|=+.+.+ |- +-+++++.|+++++..+|+-.|||.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 765 89887554332 21 1157778888888888888899997
No 123
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=90.26 E-value=1.7 Score=44.54 Aligned_cols=174 Identities=15% Similarity=0.070 Sum_probs=102.0
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (519)
..|+|.|--- +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 4566666432 23444577777777752 25679999999999999999999988642
Q ss_pred HhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 010044 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (519)
Q Consensus 355 ~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv 430 (519)
|+ +++.+|+... . ....+.. ......+|.|+++. .|+++=.- ...++|+++.+
T Consensus 187 ----G~-------~V~~~dr~~~----~---~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQM----A---PELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ----CC-------EEEEECSSCC----C---HHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ----CC-------EEEEeCCCcc----C---HHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 64 5787886421 0 1111100 01123589999987 89988432 22368999999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCcccc-CCEEecccCccceeechhhhHH
Q 010044 431 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLG 502 (519)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG 502 (519)
+.|. +..+|.=.|+-..--|-.-.+|++ .|+.--|.--=|++--. ... .--+..|+.+-|=++-.
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~~--pL~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKDH--PWRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTC--GGGTSTTBCCCCSCGGG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCCC--hhhcCCCEEECCcCCCC
Confidence 9996 678888888743222333334443 46544333222221100 000 01235678888866543
No 124
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.26 E-value=0.2 Score=50.57 Aligned_cols=126 Identities=17% Similarity=0.248 Sum_probs=75.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC--CCHHHHh
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 407 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav 407 (519)
+..||.|+|||..|.++|..|+.. |+ + .+.++|.+-=..++-..+|.+.. .+......+ .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~-----~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIK-----QL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 457999999999999999888653 55 2 69999985211100000122111 111111111 1235788
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEc
Q 010044 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFAS 471 (519)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aifAs 471 (519)
++ +|++|=+.+.+ |. .-+++++.+.++++..+|+-.|||. -...+-+++.+. -+-+|++
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~sg~p~~rviG~ 146 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL---DIMVNMLQKFSGVPDNKIVGM 146 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEEEE
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHhcCCCHHHEEee
Confidence 87 89887554443 31 1256778888899999999999996 233444555441 1457777
Q ss_pred C
Q 010044 472 G 472 (519)
Q Consensus 472 G 472 (519)
|
T Consensus 147 ~ 147 (321)
T 3p7m_A 147 A 147 (321)
T ss_dssp C
T ss_pred c
Confidence 7
No 125
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.20 E-value=2.6 Score=41.97 Aligned_cols=117 Identities=19% Similarity=0.209 Sum_probs=78.1
Q ss_pred CCCceeecC-Ccc--hhHHHHHHHHHHHHHh-----------------CCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010044 298 TTHLVFNDD-IQG--TASVVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (519)
Q Consensus 298 ~~~~~FnDD-iQG--TaaV~LAgll~Alk~~-----------------g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (519)
..+++.|-- ... +|=-+++.+|+..|-. ...|.+.++.|+|.|..|..+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 467777743 322 3334788888876531 2368899999999999999999988642
Q ss_pred cCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 010044 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (519)
Q Consensus 358 ~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~M 433 (519)
|+ +++.+|+..- + . . .....+|.|+++. .|+++=.- ...++++++.++.|
T Consensus 147 -G~-------~V~~~dr~~~------~---~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 147 -GA-------QVRGFSRTPK------E---G---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp -TC-------EEEEECSSCC------C---S---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred -CC-------EEEEECCCcc------c---c---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 64 5888887532 0 0 0 1123478888876 88877542 22357888888777
Q ss_pred HcCCCCcEEEEcCC
Q 010044 434 ASFNEKPLILALSN 447 (519)
Q Consensus 434 a~~~erPIIFaLSN 447 (519)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 5 5678887776
No 126
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.98 E-value=0.7 Score=42.98 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=26.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+...||.|+|+|..|..+|..+.+. | .+++++|++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 346678999999999999999998753 4 368888763
No 127
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.93 E-value=0.33 Score=48.01 Aligned_cols=98 Identities=22% Similarity=0.330 Sum_probs=57.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhcc----ccCCCCCHHH
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH----EHEPVNNLLD 405 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa~----~~~~~~~L~e 405 (519)
+.||.|+|+|+.|..+|..|.++ | .+++++|+..- +.+.+..... .|-. ......++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----IVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----HHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----HHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 57999999999999999999764 4 36888887411 1011111000 0000 0011145666
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 010044 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 451 (519)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 451 (519)
++. +|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 654 78666 33323 567778777654 55678889997654
No 128
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.82 E-value=2.1 Score=42.72 Aligned_cols=117 Identities=18% Similarity=0.179 Sum_probs=79.7
Q ss_pred CCCceeecCCc---chhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (519)
..|.|.|---- .+|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 35666664322 3344467777777652 14578899999999999999999988642
Q ss_pred HHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHH
Q 010044 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 429 (519)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~ev 429 (519)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 167 -----G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 167 -----GM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp -----TC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred -----CC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 53 588888742 11 11 1 13579999987 89988652 2245788888
Q ss_pred HHHHHcCCCCcEEEEcCCC
Q 010044 430 IEAMASFNEKPLILALSNP 448 (519)
Q Consensus 430 v~~Ma~~~erPIIFaLSNP 448 (519)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 88775 67788888873
No 129
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.75 E-value=0.22 Score=50.57 Aligned_cols=127 Identities=16% Similarity=0.227 Sum_probs=76.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (519)
-.||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|++. .+|.. ...-..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999998764 54 258999997410000000013322 33331 10001223467776
Q ss_pred cCCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEEcCC
Q 010044 410 IKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (519)
Q Consensus 410 vkptvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aifAsGS 473 (519)
+|++|=+.+.+ |- | -+++++.++++++..+|+-.|||. .+..+-+++.+. -+-+|++|.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv---d~~t~~~~k~~g~p~~rviG~gt 148 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV---DILTYATWKFSGLPKERVIGSGT 148 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH---HHHHHHHHHhcCCCHHHEEeecc
Confidence 89887544432 31 1 257778888999999999999996 244555555531 245677764
No 130
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.64 E-value=0.41 Score=48.55 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 36899999999999999998764 65 57788853
No 131
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.64 E-value=0.25 Score=49.40 Aligned_cols=118 Identities=15% Similarity=0.324 Sum_probs=71.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCcc----CCchhchhhccccCCC---CCHHH
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLLD 405 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~fa~~~~~~---~~L~e 405 (519)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++.+ ++.+.. .+......+ .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAA-AELGVDIRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHH-HHHTCCCCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhh-hhcCCCeEEEECCCH-H
Confidence 689999999999999877643 44 379999985 22211 121111 111111111 355 6
Q ss_pred HhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEE
Q 010044 406 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIF 469 (519)
Q Consensus 406 av~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~aif 469 (519)
++++ +|++|=+.+.+.. .-+++++.|.++++..+|+-.|||. . .+.+-+++.+. -.-+|
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv--~-~~t~~~~k~~~~p~~rvi 138 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV--D-AMTYVMYKKTGFPRERVI 138 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH--H-HHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch--H-HHHHHHHHhcCCChhhEE
Confidence 7887 9999866554421 2457888888888898777789997 2 23334444321 12467
Q ss_pred EcC
Q 010044 470 ASG 472 (519)
Q Consensus 470 AsG 472 (519)
++|
T Consensus 139 G~g 141 (308)
T 2d4a_B 139 GFS 141 (308)
T ss_dssp ECC
T ss_pred Eec
Confidence 775
No 132
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.63 E-value=0.51 Score=46.58 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=59.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCC--ch-hchhhc-cccCCCCCHHHHh
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL--QH-FKKPWA-HEHEPVNNLLDAV 407 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l--~~-~k~~fa-~~~~~~~~L~eav 407 (519)
.||.|+|+|+-|..+|..|.+. | .++.++|+.-. ..=+...+ +. ....+. ++.....++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 5899999999999999998763 4 36888887531 00000000 00 000000 0001124566655
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010044 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (519)
+ .+|++| ++... ..++++++.++.+- +..+|+.+.|-..
T Consensus 70 ~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 70 T--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp S--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred C--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 3 388887 55544 45668999987543 4567888999764
No 133
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.61 E-value=0.29 Score=49.37 Aligned_cols=127 Identities=14% Similarity=0.243 Sum_probs=76.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC--ccccCCccCCchhchhhccccCCC--CCHH
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 404 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G--Li~~~R~~~l~~~k~~fa~~~~~~--~~L~ 404 (519)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+- -..++...+|.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 3457999999999999999998753 54 3789999861 1111111112221 2333211111 1224
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEE
Q 010044 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAI 468 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~--G~ai 468 (519)
+++++ .|++|=+.+.+ |- .-+++++.++++++..+|+-.|||. .....-+++.+. -+-+
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv---d~~t~~~~k~sg~p~~rv 148 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV---DAMTYSVFKEAGFPKERV 148 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGE
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH---HHHHHHHHHhcCCChHHE
Confidence 67776 99887554433 21 2357888888999999999999996 333344444431 1346
Q ss_pred EEcC
Q 010044 469 FASG 472 (519)
Q Consensus 469 fAsG 472 (519)
|++|
T Consensus 149 iG~g 152 (315)
T 3tl2_A 149 IGQS 152 (315)
T ss_dssp EECC
T ss_pred Eeec
Confidence 6665
No 134
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.49 E-value=0.94 Score=44.86 Aligned_cols=100 Identities=19% Similarity=0.199 Sum_probs=60.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
.|++.+++-.| +.|++|+|||.+|.+|+..|.+. | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 88999999999999999888763 4 478888874 33322222 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC----CCCCHHHHH-HHHcCCCCcEEEEcC-CC
Q 010044 396 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS-NP 448 (519)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIFaLS-NP 448 (519)
......+|. ++|++|-++..+ -.+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 101112221 599999776544 147888665 454 467888665 44
No 135
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.45 E-value=0.72 Score=43.59 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=59.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
.||.|+|+|..|..+|..+.+. |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 5899999999999999998764 531 12478888873 1 1122222111 11123578888887
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010044 412 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (519)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (519)
+|++| ++..+ -..+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88887 33333 45677777776543 4557777777664
No 136
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.34 E-value=0.38 Score=48.24 Aligned_cols=39 Identities=21% Similarity=0.292 Sum_probs=34.6
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
++|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 479999999999999999999999886 65 6899999863
No 137
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=89.29 E-value=1.4 Score=45.09 Aligned_cols=124 Identities=14% Similarity=0.139 Sum_probs=80.4
Q ss_pred CCceeecCC---cchhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010044 299 THLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (519)
Q Consensus 299 ~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (519)
.|.|.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 109 gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~--- 185 (364)
T 2j6i_A 109 KISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVP--- 185 (364)
T ss_dssp CCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG---
T ss_pred CEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHh---
Confidence 566666422 23444578888877662 3668999999999999999999998853
Q ss_pred hhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCC----CCCCCHHHHH
Q 010044 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGV----GRTFTKEVIE 431 (519)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~----~g~Ft~evv~ 431 (519)
.|+ ++++.+|+... .....+ .+ ......+|.|+++. .|+++=.--. .++++++.++
T Consensus 186 --~G~------~~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 245 (364)
T 2j6i_A 186 --FNP------KELLYYDYQAL-------PKDAEE-KV--GARRVENIEELVAQ--ADIVTVNAPLHAGTKGLINKELLS 245 (364)
T ss_dssp --GCC------SEEEEECSSCC-------CHHHHH-HT--TEEECSSHHHHHHT--CSEEEECCCCSTTTTTCBCHHHHT
T ss_pred --CCC------cEEEEECCCcc-------chhHHH-hc--CcEecCCHHHHHhc--CCEEEECCCCChHHHHHhCHHHHh
Confidence 253 33888886421 011111 11 00112478898886 8998854321 2688888888
Q ss_pred HHHcCCCCcEEEEcCCC
Q 010044 432 AMASFNEKPLILALSNP 448 (519)
Q Consensus 432 ~Ma~~~erPIIFaLSNP 448 (519)
.|. +..+|.-.|+-
T Consensus 246 ~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 246 KFK---KGAWLVNTARG 259 (364)
T ss_dssp TSC---TTEEEEECSCG
T ss_pred hCC---CCCEEEECCCC
Confidence 885 57788888763
No 138
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.27 E-value=4.2 Score=42.26 Aligned_cols=119 Identities=18% Similarity=0.175 Sum_probs=81.0
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
..|+|||--- +.+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 4678888543 34455578888888763 25679999999999999999999988642
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 010044 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (519)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 168 --G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp --TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred --CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHhh
Confidence 64 5888887421 1010 01 123478888886 88877442 1235788888888
Q ss_pred HHcCCCCcEEEEcCC
Q 010044 433 MASFNEKPLILALSN 447 (519)
Q Consensus 433 Ma~~~erPIIFaLSN 447 (519)
|. +..++.=.|.
T Consensus 223 mk---~ga~lIN~aR 234 (404)
T 1sc6_A 223 MK---PGSLLINASR 234 (404)
T ss_dssp SC---TTEEEEECSC
T ss_pred cC---CCeEEEECCC
Confidence 85 5667777775
No 139
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=89.24 E-value=2.1 Score=43.64 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=71.8
Q ss_pred hhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcE
Q 010044 310 TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (519)
Q Consensus 310 TaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i 369 (519)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 455567777776652 2467899999999999999999999864 254 58
Q ss_pred EEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEc
Q 010044 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILAL 445 (519)
Q Consensus 370 ~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaL 445 (519)
+.+|+.. .. . . .+ ....+|.|+++. .|+++=.-- ..++++++.++.|. +..++.=.
T Consensus 198 ~~~dr~~----~~-~-~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LS-G-V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CT-T-S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----cc-c-c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888642 11 0 0 11 113589999987 999884421 23678899999886 67788888
Q ss_pred CCCCCCCCCCHHHHhc
Q 010044 446 SNPTSQSECTAEEAYT 461 (519)
Q Consensus 446 SNPt~~~E~tpe~A~~ 461 (519)
|.-..--|-.-.+|++
T Consensus 258 aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK 273 (340)
T ss_dssp SCC-------------
T ss_pred CCCcccCHHHHHHHHH
Confidence 8754333433344443
No 140
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.11 E-value=0.78 Score=48.61 Aligned_cols=101 Identities=11% Similarity=0.153 Sum_probs=64.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHh
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav 407 (519)
++..+|.|+|+|..|.++|..|.+. |. +++++|+. .+ ......+.+.. ......++.|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~~---~~~~l~~~~~~~gi~~~~s~~e~v 73 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----RE---KTEEVIAENPGKKLVPYYTVKEFV 73 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----HH---HHHHHHHHSTTSCEEECSSHHHHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----HH---HHHHHHhhCCCCCeEEeCCHHHHH
Confidence 5677899999999999999999753 53 57777763 11 12111111100 011235888988
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
+.. ++|++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 74 ~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 74 ESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 753 488877 45445567888998887544 456888899965
No 141
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.00 E-value=0.61 Score=47.49 Aligned_cols=100 Identities=23% Similarity=0.186 Sum_probs=60.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhc--hhhccc---cCC---CCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWAHE---HEP---VNN 402 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k--~~fa~~---~~~---~~~ 402 (519)
..||.|+|+|+-|.++|..|.+. | .+++++|++--.. +.++... ..|-.. .+. ..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~----~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHV----DEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHH----HHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHH----HHHHHcCCCcccCCCCccCCCeEEECC
Confidence 46899999999999999999753 4 3577777741100 0011100 001100 011 257
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010044 403 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (519)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (519)
+.|+++. +|++| ++... .+.+++++.++.+- +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888876 78777 33322 46778888887654 4667888888654
No 142
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.84 E-value=0.73 Score=44.83 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=58.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec--CCccccCCccCCchhchhhc--------cccCCCC-
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWA--------HEHEPVN- 401 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs--~GLi~~~R~~~l~~~k~~fa--------~~~~~~~- 401 (519)
||.|+|+|..|..+|..|.+. | .+++++|+ +.- .+...++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999998764 4 36888887 321 0111111000 0000112
Q ss_pred -CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 402 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 402 -~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
++.|+++. +|++|= +... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67788875 888773 3323 36788888886533466888898865
No 143
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.84 E-value=0.86 Score=44.95 Aligned_cols=111 Identities=12% Similarity=0.165 Sum_probs=64.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccC-CccCCchhch--hhccc---cCC---CC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFKK--PWAHE---HEP---VN 401 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~-R~~~l~~~k~--~fa~~---~~~---~~ 401 (519)
..||.|+|+|..|.++|..|.+..... . ....+++++|+..-.... +.+.+..... .|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 368999999999999999998752110 0 001368888875321100 0001111000 01000 001 14
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010044 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (519)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (519)
++.++++. +|++| ++... ...+++++.++.+. +..+|..++|-.+
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888875 89877 44333 57789999887653 4678889999654
No 144
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=88.83 E-value=2.6 Score=42.38 Aligned_cols=91 Identities=15% Similarity=0.163 Sum_probs=60.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (519)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ...+..-+. ..+|.++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~----~~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV----NVEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH----HHHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch----hhhhhcCce----ecCHHHH
Confidence 68999999999999999999998854 253 688888742 10 111110011 1378888
Q ss_pred hcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 407 VKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 407 v~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
++. +|+++=.-. ..++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 898874432 13578888888885 45 7766663
No 145
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.69 E-value=1.4 Score=44.89 Aligned_cols=96 Identities=10% Similarity=0.212 Sum_probs=62.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHh
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav 407 (519)
++..||.|+|.|..|..+|..|.+. | -+++++|+. .+ ... .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~---~~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VN---AVQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HH---HHH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HH---HHH----HHHHCCCEEeCCHHHHH
Confidence 4567999999999999999998763 5 357777763 11 111 12211 12346889988
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010044 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (519)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (519)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-.
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 874 568877 333333 778888887654 3567888888743
No 146
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.63 E-value=0.27 Score=50.52 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCE
Confidence 57899999999999999999999875 75 7999999863
No 147
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=88.52 E-value=4.6 Score=40.64 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=82.5
Q ss_pred CCCceeecCCcc---hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 298 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
..|+|.|----. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 92 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 168 (333)
T 1j4a_A 92 LGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF--- 168 (333)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC---
Confidence 467777753333 344478888887762 23568899999999999999999988642
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHH
Q 010044 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 432 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~ 432 (519)
|+ +++.+|+.. . . . . ..++. ...+|.|+++. .|+++=.-. ..++++++.++.
T Consensus 169 --G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 224 (333)
T 1j4a_A 169 --GA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIAK 224 (333)
T ss_dssp --TC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHHH
T ss_pred --CC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHhh
Confidence 64 688888742 1 1 1 1 11221 12379999986 899885432 235788999998
Q ss_pred HHcCCCCcEEEEcCCCC
Q 010044 433 MASFNEKPLILALSNPT 449 (519)
Q Consensus 433 Ma~~~erPIIFaLSNPt 449 (519)
|. +..++.-.|.-.
T Consensus 225 mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 225 MK---QDVVIVNVSRGP 238 (333)
T ss_dssp SC---TTEEEEECSCGG
T ss_pred CC---CCcEEEECCCCc
Confidence 86 577888787643
No 148
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=88.51 E-value=2.2 Score=45.78 Aligned_cols=99 Identities=15% Similarity=0.242 Sum_probs=57.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhcc-c--cCCCCC-HH
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-E--HEPVNN-LL 404 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~-~--~~~~~~-L~ 404 (519)
-+.||||+|||+.|-++|.+|++. .++. ..+|.+.|+.-. +.+ +. ....++.. . ..+... |.
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~----~~~-~~~~~g~~~~~~~Vdadnv~~~l~ 78 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT----KVD-VAQQYGVSFKLQQITPQNYLEVIG 78 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC----SCC-HHHHHTCEEEECCCCTTTHHHHTG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh----hhh-HHhhcCCceeEEeccchhHHHHHH
Confidence 357899999999999999999874 2432 247888887421 111 11 11112221 1 111112 34
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
..|+. +|++|=+| ...++-+++++-.+ ..=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s--~~~~~l~Im~acle--aGv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVS--IGISSLALIILCNQ--KGALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECC--SSSCHHHHHHHHHH--HTCEEEESSC
T ss_pred HHhcC--CCEEEECC--ccccCHHHHHHHHH--cCCCEEECCC
Confidence 46664 59999655 33577788877653 2334566666
No 149
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=88.50 E-value=0.66 Score=46.12 Aligned_cols=123 Identities=19% Similarity=0.282 Sum_probs=75.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec--CC-ccccCCccCCchhchhhccccCCC----CCHH
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KG-LIVSSRKDSLQHFKKPWAHEHEPV----NNLL 404 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs--~G-Li~~~R~~~l~~~k~~fa~~~~~~----~~L~ 404 (519)
||+|.|| |..|..++..|+. .|+ ...++|+|. +- .+..... +|.+.. ++....-.+ .++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~-dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLRE-DIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHH-HHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHH-HHHHhH-HhcCCCeEEEeCCcchH
Confidence 8999999 9999999888764 243 256999996 21 0000000 122211 232100011 1378
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEE
Q 010044 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAI 468 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt--~G~ai 468 (519)
+++++ +|++|=+.+.+ |- .+++++++|.+++ +.+|+--|||. ....+-+++.+ .-.-+
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv---~~~t~~~~k~~~~p~~rv 143 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV---DVMTYKALVDSKFERNQV 143 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH---HHHHHHHHHHHCCCTTSE
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH---HHHHHHHHHhhCcChhcE
Confidence 88987 99988666644 21 3568889999999 99999999996 33344444432 22357
Q ss_pred EEcCC
Q 010044 469 FASGS 473 (519)
Q Consensus 469 fAsGS 473 (519)
|++|.
T Consensus 144 iG~gt 148 (313)
T 1hye_A 144 FGLGT 148 (313)
T ss_dssp EECTT
T ss_pred EEeCc
Confidence 77764
No 150
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.46 E-value=4.6 Score=41.15 Aligned_cols=120 Identities=14% Similarity=0.207 Sum_probs=82.0
Q ss_pred CCCceeecCCc---chhHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcchHHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (519)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~----------~----------g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (519)
..|+|.|---- .+|=-+++-+|+..|- . +..|.+.+|.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 36777776333 3455568888877651 2 3468899999999999999999998643
Q ss_pred HhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHH
Q 010044 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 430 (519)
Q Consensus 355 ~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv 430 (519)
|+ +++.+|+.. . .... ..+ ...+|.|+++. .|+++=.-- ..++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 688888752 1 1010 111 11389999987 999885432 2468999999
Q ss_pred HHHHcCCCCcEEEEcCCC
Q 010044 431 EAMASFNEKPLILALSNP 448 (519)
Q Consensus 431 ~~Ma~~~erPIIFaLSNP 448 (519)
+.|. +..++.=.|.-
T Consensus 224 ~~mk---~gailIN~aRg 238 (343)
T 2yq5_A 224 KEMK---KSAYLINCARG 238 (343)
T ss_dssp HHSC---TTCEEEECSCG
T ss_pred hhCC---CCcEEEECCCC
Confidence 9996 67888877763
No 151
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.34 E-value=0.55 Score=49.95 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999998764 54 67788764
No 152
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.24 E-value=0.39 Score=50.69 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHc-CCCcee--ecCCcchhHHHHHHHHHHHHHhCC--------Cc
Q 010044 261 LLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIGG--------TL 329 (519)
Q Consensus 261 ~idefv~av~~~fGp~~lIqfEDf~~~~af~iL~ryr-~~~~~F--nDDiQGTaaV~LAgll~Alk~~g~--------~l 329 (519)
.+..+++.+...+ ++ |.|+-+......++-++|. ..+|++ |+..-+.+.....-|+..+..... .-
T Consensus 134 ~~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 210 (521)
T 1hyu_A 134 DVVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKR 210 (521)
T ss_dssp HHHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTS
T ss_pred HHHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhccccccccccccc
Confidence 3556666666677 43 5555444445667888886 467754 665666676666677766533210 11
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
...+|+|+|||.||+..|..+.+. |+ ++.++|.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~-----G~-------~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARK-----GI-------RTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 346799999999999999988652 53 56677653
No 153
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=88.15 E-value=1.5 Score=45.34 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=73.0
Q ss_pred chhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcC
Q 010044 309 GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (519)
Q Consensus 309 GTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~ 367 (519)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 3455567777766652 2346889999999999999999998743 254
Q ss_pred cEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEE
Q 010044 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLIL 443 (519)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIF 443 (519)
+++.+|+.. . .......-+ ...+|.|+++. .|+++=. ....++++++.++.|. +..++.
T Consensus 201 ~V~~~d~~~----~----~~~~~~~g~----~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailI 263 (365)
T 4hy3_A 201 RIRVFDPWL----P----RSMLEENGV----EPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFI 263 (365)
T ss_dssp EEEEECSSS----C----HHHHHHTTC----EECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEE
T ss_pred EEEEECCCC----C----HHHHhhcCe----eeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEE
Confidence 677777641 0 001111111 12489999987 9999843 2334689999999996 677888
Q ss_pred EcCCC
Q 010044 444 ALSNP 448 (519)
Q Consensus 444 aLSNP 448 (519)
=.|.-
T Consensus 264 N~aRG 268 (365)
T 4hy3_A 264 LLSRA 268 (365)
T ss_dssp ECSCG
T ss_pred ECcCC
Confidence 77763
No 154
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=87.77 E-value=1.1 Score=45.38 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=73.6
Q ss_pred hhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEe
Q 010044 310 TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (519)
Q Consensus 310 TaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvD 373 (519)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 344567777776652 35679999999999999999999998643 64 688888
Q ss_pred cCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010044 374 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNP 448 (519)
Q Consensus 374 s~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (519)
+.. .. ... +.. .....+|.|+++. .|+++=.- ...++|+++.++.|. +..++.=.|.-
T Consensus 171 r~~----~~---~~~----~~~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk---~gailIN~aRG 232 (324)
T 3hg7_A 171 RSG----RE---RAG----FDQ-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK---PGAILFNVGRG 232 (324)
T ss_dssp SSC----CC---CTT----CSE-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC---TTCEEEECSCG
T ss_pred CCh----HH---hhh----hhc-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC---CCcEEEECCCc
Confidence 754 11 111 111 1123578888886 88887432 223578888887775 67788877753
No 155
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=87.74 E-value=5.5 Score=40.11 Aligned_cols=120 Identities=17% Similarity=0.140 Sum_probs=81.5
Q ss_pred CCCceeecCCcc---hhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (519)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (519)
..|.|.|---.. +|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 467777753333 344477888877651 34678999999999999999999988642
Q ss_pred hhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 010044 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (519)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~ 431 (519)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 588888742 11 1 11 1121 2379999987 899885421 23589999999
Q ss_pred HHHcCCCCcEEEEcCCC
Q 010044 432 AMASFNEKPLILALSNP 448 (519)
Q Consensus 432 ~Ma~~~erPIIFaLSNP 448 (519)
.|. +..++.=.|.-
T Consensus 222 ~mk---~ga~lIn~srg 235 (333)
T 1dxy_A 222 LMK---PGAIVINTARP 235 (333)
T ss_dssp HSC---TTEEEEECSCT
T ss_pred hCC---CCcEEEECCCC
Confidence 996 56788877764
No 156
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.65 E-value=0.48 Score=52.31 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.8
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 67889999999999999999999875 75 6899999863
No 157
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=87.52 E-value=1.7 Score=43.93 Aligned_cols=122 Identities=17% Similarity=0.325 Sum_probs=81.7
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
..|+|.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777542 23444567777776542 26679999999999999999999998643
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 010044 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (519)
|+ +++.+|+..- . .......+ ...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 64 6888887521 1 11111111 12478888887 89888432 1246899999988
Q ss_pred HHcCCCCcEEEEcCCC
Q 010044 433 MASFNEKPLILALSNP 448 (519)
Q Consensus 433 Ma~~~erPIIFaLSNP 448 (519)
|. +..++.=.|.-
T Consensus 217 mk---~gailIN~aRG 229 (324)
T 3evt_A 217 TK---QQPMLINIGRG 229 (324)
T ss_dssp CC---SCCEEEECSCG
T ss_pred CC---CCCEEEEcCCC
Confidence 86 67788877763
No 158
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.51 E-value=0.72 Score=46.41 Aligned_cols=110 Identities=9% Similarity=0.142 Sum_probs=61.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccC-CccCCchhc--hhhccc------cCCCCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAHE------HEPVNN 402 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~-R~~~l~~~k--~~fa~~------~~~~~~ 402 (519)
.||.|+|+|..|.++|..|.++...... -..+++++|+..-+... +.+.+.... ..|-.. .....+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~-----~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYL-----FENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTT-----BCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCC-----CCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 4899999999999999999875211000 00468888875321100 000011100 001000 001246
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc----C-CCCcEEEEcCCCCC
Q 010044 403 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----F-NEKPLILALSNPTS 450 (519)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~----~-~erPIIFaLSNPt~ 450 (519)
+.|+++. +|++| ++... -..+++++.++. . .+..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 8888876 88777 33322 567888888875 3 34668888998654
No 159
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.48 E-value=0.79 Score=45.93 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=70.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC--CCHHHHhcc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav~~ 409 (519)
.||.|+|||..|..+|-+|... |+ ...+.|+|.+-=..++-.-+|.+- .+|....... .+-.+++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~ 69 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC
Confidence 3899999999999999888653 54 257999997521111111123321 1222111111 223356776
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcc
Q 010044 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 462 (519)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~w 462 (519)
.|++|=+.+.+ |- +-+++++++++++.+.||+-.|||. ..+..-+++.
T Consensus 70 --aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv---d~~t~i~~k~ 131 (294)
T 2x0j_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKE 131 (294)
T ss_dssp --CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHH
T ss_pred --CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc---hhhHHhhHHH
Confidence 99998666644 31 1246788888999999999999996 2333444444
No 160
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.34 E-value=0.61 Score=45.44 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|.+||..++.+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998763 53 68888874
No 161
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.29 E-value=3.4 Score=41.16 Aligned_cols=90 Identities=10% Similarity=0.085 Sum_probs=64.9
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (519)
..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ... + ....+|.|+
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~----~~---~~~-----~---~~~~~l~el 170 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSS----VD---QNV-----D---VISESPADL 170 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSC----CC---TTC-----S---EECSSHHHH
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEeccc----cc---ccc-----c---cccCChHHH
Confidence 458899999999999999999998754 64 688888742 11 111 1 123589999
Q ss_pred hcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 010044 407 VKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNP 448 (519)
Q Consensus 407 v~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (519)
++. .|+++=.- ...++++++.++.|. +..+|.=.|.-
T Consensus 171 l~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG 211 (290)
T 3gvx_A 171 FRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARA 211 (290)
T ss_dssp HHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCG
T ss_pred hhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehh
Confidence 987 89887432 223678899988886 67788877763
No 162
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=87.19 E-value=4.3 Score=41.05 Aligned_cols=96 Identities=16% Similarity=0.088 Sum_probs=62.9
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 010044 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (519)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (519)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- + ....++ + ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~~-~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEKA-L--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHHH-H--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHhh-c--CcEEeCCHHH
Confidence 5679999999999999999999988622 253 6888887421 1 111110 0 0011247888
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 406 av~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~sr 257 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTAR 257 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSC
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCC
Confidence 8886 898875421 23688888888885 5667776665
No 163
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.17 E-value=1 Score=42.57 Aligned_cols=96 Identities=14% Similarity=0.075 Sum_probs=57.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhc---hhhccccCCCCCHHHHhcc
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 409 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k---~~fa~~~~~~~~L~eav~~ 409 (519)
||.|+|+|..|..+|..|.+. | .+++++|+.- ++.+.+.... ..+-.. -. .+..++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~-~~~~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LT-ANDPDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EE-ESCHHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-ee-ecCccccCC
Confidence 799999999999999998753 4 3688888742 1111121100 000000 00 122466765
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010044 410 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (519)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (519)
+|++|= +.... -.+++++.++.+. +..+|..++|...
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 898873 33332 3588999887643 4567777888653
No 164
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.10 E-value=1.1 Score=47.71 Aligned_cols=98 Identities=13% Similarity=0.181 Sum_probs=61.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa-~~~~~~~~L~eav~~ 409 (519)
.+|.|+|+|..|.++|..|.+. |. +++++|+. .+ .+....+ ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QS---KVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SH---HHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999999763 53 57778763 11 1111111 000 011123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 488777 44444456778888876543 356888888854
No 165
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.96 E-value=1.8 Score=38.20 Aligned_cols=98 Identities=12% Similarity=0.095 Sum_probs=59.8
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhc
Q 010044 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 408 (519)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~ 408 (519)
..+|+|.|| |-.|..+++.|++. | .++++++++.- +...+...+..+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQA-----G-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-----C-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 88888888888652 4 36888887521 10111011111111 2122246778887
Q ss_pred ccCCcEEEeccCCCCC---------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 409 VIKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
. +|++|=+.+.... .+..++++|.+..-+.|||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 6 8999988765431 2567888887666667887544
No 166
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.86 E-value=0.76 Score=38.33 Aligned_cols=97 Identities=15% Similarity=0.202 Sum_probs=51.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchh----hcc-ccCCCCCHHH
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH-EHEPVNNLLD 405 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~----fa~-~~~~~~~L~e 405 (519)
+.+|+|+|+|..|..+|+.|.+. | .+++++|++- + .+...+.. +.. +......|.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-----g-------~~v~~~d~~~----~---~~~~~~~~~~~~~~~~d~~~~~~l~~ 64 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-----G-------HDIVLIDIDK----D---ICKKASAEIDALVINGDCTKIKTLED 64 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCH----H---HHHHHHHHCSSEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----H---HHHHHHHhcCcEEEEcCCCCHHHHHH
Confidence 35899999999999999988652 4 3688888741 1 12111111 111 1111112332
Q ss_pred H-hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 406 A-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 406 a-v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
+ ++ ++|++|=+.... ..+..+.+...+.....||.-.+||.
T Consensus 65 ~~~~--~~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~ 106 (140)
T 1lss_A 65 AGIE--DADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARISEIE 106 (140)
T ss_dssp TTTT--TCSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred cCcc--cCCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEecCHh
Confidence 2 33 589988765432 22222333333445566777666664
No 167
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=86.81 E-value=3.6 Score=41.59 Aligned_cols=139 Identities=15% Similarity=0.112 Sum_probs=87.6
Q ss_pred CCceeecCC---cchhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHh
Q 010044 299 THLVFNDDI---QGTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (519)
Q Consensus 299 ~~~~FnDDi---QGTaaV~LAgll~Alk~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (519)
.|+|.|--- ..+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 455555322 23455567777777652 35679999999999999999999998643
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 010044 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (519)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (519)
|+ +++.+|+..- . . .. ...-...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 164 --G~-------~V~~~d~~~~------~-~--~~----~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVKR------E-D--LK----EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSCC------H-H--HH----HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCcc------h-h--hH----hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 64 6888887421 1 1 00 001112359999987 99887542 2346899999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEE
Q 010044 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIF 469 (519)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aif 469 (519)
|. +..|+.=.|.-..--|-.-.+|++ .|+.-.
T Consensus 220 mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~g 251 (334)
T 2pi1_A 220 MK---DGVYLINTARGKVVDTDALYRAYQ--RGKFSG 251 (334)
T ss_dssp SC---TTEEEEECSCGGGBCHHHHHHHHH--TTCEEE
T ss_pred CC---CCcEEEECCCCcccCHHHHHHHHH--hCCceE
Confidence 96 677888777643223333334443 465443
No 168
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=86.80 E-value=2.4 Score=44.36 Aligned_cols=82 Identities=23% Similarity=0.341 Sum_probs=53.8
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 010044 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (519)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (519)
--|++|+|+ |-+|.+.++.+... |.. ..++..+|.+= ..+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---cccCC-------ch-----------hhHhh
Confidence 568999999 99999999988653 541 12566666641 11110 01 23554
Q ss_pred cCCcEEEeccCC----CCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGV----GRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
.|++||+--. |.++|+|+|+.|.+ +--+|.=+|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m~k--~gsVIVDVA 300 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNPNR--RLRTVVDVS 300 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCTTC--CCCEEEETT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcCcC--CCeEEEEEe
Confidence 8999998754 56899999999931 445666555
No 169
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.75 E-value=0.48 Score=46.99 Aligned_cols=110 Identities=18% Similarity=0.150 Sum_probs=65.9
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc---cccCCccCCchhchhhccccCCCCCHHHHh
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL---i~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (519)
.||+|.|| |..|..++..|+.. |.--..-...++++|...- ...... ++.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~-----g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG-----EMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT-----TTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 99999999887642 4300000137999997420 000000 12111112322212225688899
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
++ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 86 9999977665431 3556788888876 666888899996
No 170
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.73 E-value=0.76 Score=45.22 Aligned_cols=48 Identities=8% Similarity=0.146 Sum_probs=37.0
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.|+..+++-.|.. .+.+++|+|||.+|.+++..|.+. |. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~~-----G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKNS-----GF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHHT-----TC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHHC-----CC------CEEEEEeCC
Confidence 5667777766654 568999999999999999887653 64 679988873
No 171
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.71 E-value=1.1 Score=43.04 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=56.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...++.-.. .....++.++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 36899999999999999998753 32 14688888641 111111110000 0012356667765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCC
Q 010044 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNP 448 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNP 448 (519)
+|++| ++..+... +++++.+..+ .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78777 44434333 7888887754 455677766663
No 172
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.49 E-value=0.56 Score=51.65 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|++.||+|+|||..|..||+.|+.+ |+ .+|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478899999999999999999999875 75 799999976
No 173
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.43 E-value=1.3 Score=43.91 Aligned_cols=101 Identities=10% Similarity=0.153 Sum_probs=60.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (519)
+..||.|+|+|..|.++|..|.+. |.. ...+++++|+. .++ ..+...++ + ...-..+..|+++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~l~~-~--G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSALRK-M--GVKLTPHNKETVQH 84 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHHHHH-H--TCEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHHHHH-c--CCEEeCChHHHhcc
Confidence 345899999999999999998763 531 01468888863 110 01111110 0 00111467788876
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 010044 410 IKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (519)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (519)
+|++| ++..+ -..+++++.+... .+..+|.-++|..+
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 78776 33333 4667788777653 34567888888774
No 174
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.42 E-value=0.24 Score=44.36 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=53.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea 406 (519)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++- ++.+.+......... +..+...|.++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~~----~~~~~~~~~g~~~~~gd~~~~~~l~~~ 100 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIRE----EAAQQHRSEGRNVISGDATDPDFWERI 100 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESCH----HHHHHHHHTTCCEEECCTTCHHHHHTB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECCH----HHHHHHHHCCCCEEEcCCCCHHHHHhc
Confidence 35577899999999999999988652 04 3688888741 111111111001110 11111124443
Q ss_pred --hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 407 --VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 407 --v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
++ ++|++|=++... .-+..++....+.+....|++.+|
T Consensus 101 ~~~~--~ad~vi~~~~~~-~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 101 LDTG--HVKLVLLAMPHH-QGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CSCC--CCCEEEECCSSH-HHHHHHHHHHHHTTCCSEEEEEES
T ss_pred cCCC--CCCEEEEeCCCh-HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 33 489998655422 334455555555554455555544
No 175
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.76 E-value=0.41 Score=45.82 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=55.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc------ccCCCCCHHH
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPVNNLLD 405 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~------~~~~~~~L~e 405 (519)
.||.|+|+|..|..+|..|.+. | .+++++|++.- +.+.+......... ..-...+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999988753 4 36888887421 00001100000000 0000112223
Q ss_pred Hhccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 010044 406 AVKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (519)
Q Consensus 406 av~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (519)
+.+.+ ++|++|= +... -..+++++.++.+- +..+|..++|...
T Consensus 68 ~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 33211 3788773 3333 24688888887643 4678888998653
No 176
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=85.72 E-value=3 Score=43.39 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=63.5
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 010044 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (519)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (519)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. .. ....+ .+ ......+|.|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~~----~~---~~~~~-~~--G~~~~~~l~e 243 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRHR----LP---ESVEK-EL--NLTWHATRED 243 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSC----CC---HHHHH-HH--TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCCc----cc---hhhHh-hc--CceecCCHHH
Confidence 5679999999999999999999988542 53 578777631 10 11010 01 0011247889
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 406 av~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.
T Consensus 244 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aR 284 (393)
T 2nac_A 244 MYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTAR 284 (393)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSC
T ss_pred HHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCC
Confidence 8886 89887542 224688888888886 5678887775
No 177
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.61 E-value=0.43 Score=43.51 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=59.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc---c--ccCCCCCHHHH
Q 010044 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 406 (519)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa---~--~~~~~~~L~ea 406 (519)
||+|+| +|..|..+|+.+.+. | .+++++|++- ++ ....++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-----g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-----G-------HEIVVGSRRE----EK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-----T-------CEEEEEESSH----HH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-----C-------CEEEEEeCCH----HH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 999999999988642 4 2688888741 11 111111110 0 011 2478888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
++. +|++|=+.. + -..+++++.+.+..+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 886 899884433 3 235677777654334678999999774
No 178
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=85.57 E-value=0.57 Score=47.16 Aligned_cols=117 Identities=20% Similarity=0.240 Sum_probs=65.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc----ccCCCCCHHHHh
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAV 407 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~----~~~~~~~L~eav 407 (519)
.||+|+|||-.|-.+|+.|.+ ..++.++|... +.+...+ +++. +..+..+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 379999999999888877632 13577777631 1122211 2222 222334688888
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCcc
Q 010044 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 478 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv 478 (519)
++ .|++|-+ .|.-+..+++++-.+... . ++-+|--.......-++|.+ .|.. +..|.=|+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~~~~~~~~l~~~a~~--~g~~-~i~~~G~~PG 137 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSFMPENPLELRDEAEK--AQVT-IVFDAGFAPG 137 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCCCSSCGGGGHHHHHH--TTCE-EECCCBTTTB
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeeccchhhhhhhhhhcc--CCce-eeecCCCCCc
Confidence 86 8999854 455688888888665433 3 55566433222223345544 3533 2233336664
No 179
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.52 E-value=3.4 Score=41.37 Aligned_cols=122 Identities=16% Similarity=0.156 Sum_probs=77.7
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (519)
..|.|.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 168 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF 168 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC
Confidence 3556666432 23344467777777653 24568899999999999999999988642
Q ss_pred HHhhcCCChhhhcCcEEEEec-CCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHH
Q 010044 354 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 428 (519)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs-~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~e 428 (519)
|+ +++.+|+ .. +. ...+..-+ ....+|.|+++. .|+++=.-- ..++++++
T Consensus 169 -----G~-------~V~~~d~~~~-------~~-~~~~~~g~---~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 169 -----DM-------DIDYFDTHRA-------SS-SDEASYQA---TFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp -----TC-------EEEEECSSCC-------CH-HHHHHHTC---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred -----CC-------EEEEECCCCc-------Ch-hhhhhcCc---EEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 53 6888886 31 10 00110001 112478899886 898874421 23578888
Q ss_pred HHHHHHcCCCCcEEEEcCC
Q 010044 429 VIEAMASFNEKPLILALSN 447 (519)
Q Consensus 429 vv~~Ma~~~erPIIFaLSN 447 (519)
.++.|. +..+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888885 5678887776
No 180
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.29 E-value=0.46 Score=48.36 Aligned_cols=130 Identities=18% Similarity=0.237 Sum_probs=78.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccC--CCCCHHH
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE--PVNNLLD 405 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~--~~~~L~e 405 (519)
+....||.|+|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|..... ...+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999988653 54 257999997411001000012221 12322110 123454
Q ss_pred HhcccCCcEEEeccCCC---C-----CC------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEE
Q 010044 406 AVKVIKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG--RAIF 469 (519)
Q Consensus 406 av~~vkptvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G--~aif 469 (519)
++++ .|++|=+.+.+ | +| -+++++.|+++++.-+|+-.|||. .+..+-+++.+.= +-+|
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---di~t~~~~k~sg~p~~rvi 158 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV---DILTYVAWKISGFPKNRVI 158 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH---HHHHHHHHHHhCCCHHHEE
Confidence 5776 89887444333 3 12 257788889999999999999996 2455556665411 3477
Q ss_pred EcCCC
Q 010044 470 ASGSP 474 (519)
Q Consensus 470 AsGSP 474 (519)
++|.-
T Consensus 159 G~gt~ 163 (331)
T 4aj2_A 159 GSGCN 163 (331)
T ss_dssp ECTTH
T ss_pred eeccc
Confidence 77643
No 181
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.19 E-value=0.44 Score=38.60 Aligned_cols=84 Identities=17% Similarity=0.183 Sum_probs=51.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhch---hhcc-ccCCCCCHHHH
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWAH-EHEPVNNLLDA 406 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~---~fa~-~~~~~~~L~ea 406 (519)
..+|+|+|+|..|..+++.+... |. .+++++|++. .+ +...+. .+.. +.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-----g~------~~v~~~~r~~----~~---~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-----SN------YSVTVADHDL----AA---LAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-----SS------EEEEEEESCH----HH---HHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCH----HH---HHHHHhCCCcEEEecCCCHHHHHHH
Confidence 46899999999999999988652 41 3688888741 11 111110 1111 11112356677
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcC
Q 010044 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASF 436 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~ 436 (519)
++. +|++|=+. +..++..+++.+.+.
T Consensus 67 ~~~--~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 67 LGG--FDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp TTT--CSEEEECS--CGGGHHHHHHHHHHT
T ss_pred HcC--CCEEEECC--CchhhHHHHHHHHHh
Confidence 764 99999665 335677787777653
No 182
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.10 E-value=0.51 Score=48.23 Aligned_cols=107 Identities=17% Similarity=0.351 Sum_probs=65.2
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc-CCCCCHHHH
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDA 406 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~-~~~~~L~ea 406 (519)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|.... .-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999966654 365 247999997411001000013222 231100 011578899
Q ss_pred hcccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCC
Q 010044 407 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPL-ILALSNPT 449 (519)
Q Consensus 407 v~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPI-IFaLSNPt 449 (519)
+++ +|++|=+.+.+ | ..-+++++.+.+++.+-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 987 99988544332 2 123467777888898885 88899996
No 183
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=85.03 E-value=1.3 Score=45.67 Aligned_cols=96 Identities=20% Similarity=0.305 Sum_probs=55.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-----------ccCCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 400 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-----------~~~~~ 400 (519)
.||+|+|||-.|..+|+.|++ .|- .-.++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 489999999877777777654 231 00478888874 111 2222222211 11122
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 401 ~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
.++.++++..++|++|=+++. .+..+++++..+. ...+|= +|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~-g~~vvD-~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRT-GVPYLD-TAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHH-TCCEEE-SSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHh-CCCEEE-ecC
Confidence 468888988889999977653 2456666665443 344442 544
No 184
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=84.99 E-value=3.4 Score=42.25 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=72.6
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 010044 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (519)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (519)
|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. + .... .......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~----~~-~---~~~~---~g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN----SK-E---RARA---DGFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH----HH-H---HHHH---TTCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC----CH-H---HHHh---cCceEeCCHHH
Confidence 5678999999999999999999988643 64 688888641 00 0 0000 00112358999
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 010044 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (519)
Q Consensus 406 av~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~ 461 (519)
+++. .|+++=.- ...++|+++.++.|. +..++.=.|.-..--|-.-.+|++
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH
Confidence 9987 89887532 234689999999886 678998888744334444455554
No 185
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.96 E-value=2.1 Score=43.04 Aligned_cols=123 Identities=14% Similarity=0.117 Sum_probs=80.9
Q ss_pred CCCceeecCC----cchhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010044 298 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (519)
Q Consensus 298 ~~~~~FnDDi----QGTaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (519)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 4666665321 34555678888877763 25678999999999999999999998642
Q ss_pred cCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 010044 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (519)
Q Consensus 358 ~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~M 433 (519)
|+ +++.+|+..- ...... .+ ....+|.|+++. .|+++=.- ...++|+++.++.|
T Consensus 162 -G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 162 -GF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp -TC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred -CC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 64 6788886421 111111 11 011478888886 89887431 12368889988888
Q ss_pred HcCCCCcEEEEcCCCC
Q 010044 434 ASFNEKPLILALSNPT 449 (519)
Q Consensus 434 a~~~erPIIFaLSNPt 449 (519)
. +..++.=.|.-.
T Consensus 220 k---~gailIN~aRG~ 232 (315)
T 3pp8_A 220 P---DGAYVLNLARGV 232 (315)
T ss_dssp C---TTEEEEECSCGG
T ss_pred C---CCCEEEECCCCh
Confidence 6 677888777643
No 186
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=84.35 E-value=1.2 Score=46.23 Aligned_cols=120 Identities=23% Similarity=0.263 Sum_probs=66.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (519)
.++.+||+|+|.|.+|.++|++|.+ .| -++...|.+-.-.....+.|....-++.... .-.+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~----~~~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGS----HPLELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESC----CCGGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECC----ChHHhh
Confidence 4678999999999999999988876 36 3688889853110000001111111111110 111112
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEEe
Q 010044 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVF 485 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~~ 485 (519)
+. .+|.+|=.++.+ .=++++.++... .-|||= . +|-++...+++.|--||| ||||-
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~~--gi~v~~-------~----~e~~~~~~~~~~IaVTGT-------nGKTT 125 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALEK--QIPVLT-------E----VELAYLVSESQLIGITGS-------NGKTT 125 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHHT--TCCEEC-------H----HHHHHHHCCSEEEEEECS-------SCHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHHC--CCcEEe-------H----HHHHHHhcCCCEEEEECC-------CCHHH
Confidence 21 168887555554 346777666542 456651 1 233444456788888997 77654
No 187
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.35 E-value=0.51 Score=48.16 Aligned_cols=124 Identities=15% Similarity=0.154 Sum_probs=75.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHHHhc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 408 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~eav~ 408 (519)
..||.|+|||..|.++|-.++.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 47999999999999999988764 55 257999997311000000012221 2333211 01135554 66
Q ss_pred ccCCcEEEeccCC---CC-----C------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC---cEEEEc
Q 010044 409 VIKPTILIGSSGV---GR-----T------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG---RAIFAS 471 (519)
Q Consensus 409 ~vkptvLIG~S~~---~g-----~------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G---~aifAs 471 (519)
+ +|++|=+.+. +| + +-+++++.+.++++..+|+-.|||. .+...-+++.+ | +-+|++
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~~k~s-g~p~~rViG~ 162 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQDWKLS-GLPMHRIIGS 162 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH-CCCGGGEECC
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHHHHHh-CCCHHHeecc
Confidence 5 9998833332 22 1 2356778888999999999999995 34555566654 3 446666
Q ss_pred C
Q 010044 472 G 472 (519)
Q Consensus 472 G 472 (519)
|
T Consensus 163 g 163 (330)
T 3ldh_A 163 G 163 (330)
T ss_dssp T
T ss_pred c
Confidence 5
No 188
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.23 E-value=0.76 Score=46.70 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=33.1
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|++.+|+|+|+|..|..||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 57789999999999999999999886 65 799999975
No 189
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=84.18 E-value=1.6 Score=45.63 Aligned_cols=97 Identities=18% Similarity=0.281 Sum_probs=52.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChh-hhcCcEEEEecCC-------ccccCCcc--CCchhchhhccccCCCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVE-ETRKKICLVDSKG-------LIVSSRKD--SLQHFKKPWAHEHEPVN 401 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~e-eA~~~i~lvDs~G-------Li~~~R~~--~l~~~k~~fa~~~~~~~ 401 (519)
.||.|+|||+=|+++|..|.+.... .+.. +-.=++|..|..= .|...|.+ -|+..+.| ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999875321 1000 0011467555420 12222211 12111111 0001125
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC
Q 010044 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN 437 (519)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~ 437 (519)
+|.++++. +|++|= . +|-.|-+++++.+..+-
T Consensus 110 dl~~al~~--ad~ii~-a-vPs~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVF-N-IPHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEEE-C-SCGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEEE-E-CChhhhHHHHHHhcccc
Confidence 89999987 777652 2 23357788888887543
No 190
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.16 E-value=1.5 Score=42.76 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=53.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
.||.|+|+|..|..+|..+... |. +++++|+. .++ +...++. ......++.|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 86 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT----AEK---CDLFIQE---GARLGRTPAEVVST-- 86 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----GGG---GHHHHHT---TCEECSCHHHHHHH--
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC----HHH---HHHHHHc---CCEEcCCHHHHHhc--
Confidence 6899999999999999998653 53 57888763 111 2111110 00112467888876
Q ss_pred CcEEEeccCCCCCCCHHHHHHH----HcCCCCcEEEEcCCC
Q 010044 412 PTILIGSSGVGRTFTKEVIEAM----ASFNEKPLILALSNP 448 (519)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~M----a~~~erPIIFaLSNP 448 (519)
+|++|=+.. ...-.++++... ....+..+|+-+||-
T Consensus 87 ~DvVi~av~-~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~ 126 (316)
T 2uyy_A 87 CDITFACVS-DPKAAKDLVLGPSGVLQGIRPGKCYVDMSTV 126 (316)
T ss_dssp CSEEEECCS-SHHHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred CCEEEEeCC-CHHHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence 787774322 112344555432 123455677778873
No 191
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=84.16 E-value=0.46 Score=48.22 Aligned_cols=130 Identities=16% Similarity=0.144 Sum_probs=78.2
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCC-hhhhcCcEEEEecCC---ccccCCccCCchhchhhccccCCCCCHHHH
Q 010044 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAP-VEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (519)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~~-~eeA~~~i~lvDs~G---Li~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (519)
.||+|.| ||..|..+|-+|+.. |+- +++- -.+.|+|.+. .+.-... +|.+...+|.++.....++.++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~-----~~~~e~~~-~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~ 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG-----SVFGKDQP-IILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIA 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT-----TTTCTTCC-EEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----CCccccCC-CEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHH
Confidence 5899999 799999999888652 441 1111 1289999853 1111111 1433222443322222578889
Q ss_pred hcccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCCCCCCCCHHHHhcccCC--cEEE
Q 010044 407 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTWSKG--RAIF 469 (519)
Q Consensus 407 v~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPI-IFaLSNPt~~~E~tpe~A~~wt~G--~aif 469 (519)
+++ .|++|=+.+.+ | ...+++++.+.+++.+-+ |+-.|||. .++..-+++.+.+ +-.|
T Consensus 77 ~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~~~~~p~~~i 151 (333)
T 5mdh_A 77 FKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKSAPSIPKENF 151 (333)
T ss_dssp TTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTCTTSCGGGE
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHHcCCCCcCEE
Confidence 987 99988554433 2 134678888888888874 88899995 4555556555422 2236
Q ss_pred EcCC
Q 010044 470 ASGS 473 (519)
Q Consensus 470 AsGS 473 (519)
.+|.
T Consensus 152 g~~t 155 (333)
T 5mdh_A 152 SCLT 155 (333)
T ss_dssp EECC
T ss_pred EEEE
Confidence 6664
No 192
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=84.01 E-value=1.2 Score=43.81 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=54.1
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHH
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDA 406 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~ea 406 (519)
.+...||.|+|+|..|.++|..|.+. |. +++++|++ .+ .+.. ++.. .....++.|+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~~---~~~~----~~~~g~~~~~~~~e~ 62 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS----PG---KAAA----LVAAGAHLCESVKAA 62 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HH---HHHH----HHHHTCEECSSHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHH----HHHCCCeecCCHHHH
Confidence 34567999999999999999998763 53 57777763 11 1111 1111 1123578888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHH--HHHcCCCCcEEEEcCC
Q 010044 407 VKVIKPTILIGSSGVGRTFTKEVIE--AMASFNEKPLILALSN 447 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~--~Ma~~~erPIIFaLSN 447 (519)
++. +|++|=+ .....-.++++. .+....+..||.-+|+
T Consensus 63 ~~~--aDvVi~~-vp~~~~~~~v~~~~~l~~~~~g~ivid~st 102 (306)
T 3l6d_A 63 LSA--SPATIFV-LLDNHATHEVLGMPGVARALAHRTIVDYTT 102 (306)
T ss_dssp HHH--SSEEEEC-CSSHHHHHHHHTSTTHHHHTTTCEEEECCC
T ss_pred Hhc--CCEEEEE-eCCHHHHHHHhcccchhhccCCCEEEECCC
Confidence 876 7777632 212122333443 2332345667777775
No 193
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.90 E-value=2.3 Score=39.03 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=60.4
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhcc-ccCCCCCH
Q 010044 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH-EHEPVNNL 403 (519)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa~-~~~~~~~L 403 (519)
.+|++.+|+|.|| |-.|..+++.|++. | -++++++++. ++.+.+..... .+.. +.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNK-----G-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhC-----C-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4678899999998 88999999888762 5 3688888741 11111111111 1111 111 567
Q ss_pred HHHhcccCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEEcCC
Q 010044 404 LDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
.++++. +|++|=+.+.... -+..+++++.+..-+-|||.=|-
T Consensus 79 ~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 79 SHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp GGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred HHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 777775 9999977765421 13567788876666778886553
No 194
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=83.81 E-value=4.4 Score=41.08 Aligned_cols=119 Identities=13% Similarity=0.056 Sum_probs=78.7
Q ss_pred CCceeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010044 299 THLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (519)
Q Consensus 299 ~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (519)
.|+|.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 556666432 23444567777777663 2567999999999999999999998853
Q ss_pred cCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHH
Q 010044 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 432 (519)
Q Consensus 358 ~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~ 432 (519)
.|+ +++.+|+.. . .. .+.. .-...+|.|+++. .|+++=.-- ..++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 253 588888631 1 10 1111 0011479999986 899885421 235788888888
Q ss_pred HHcCCCCcEEEEcCC
Q 010044 433 MASFNEKPLILALSN 447 (519)
Q Consensus 433 Ma~~~erPIIFaLSN 447 (519)
|. +..++.=.|.
T Consensus 245 mk---~gailIN~ar 256 (335)
T 2g76_A 245 CK---KGVRVVNCAR 256 (335)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 86 6778887776
No 195
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=83.80 E-value=0.61 Score=47.63 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=67.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc---cccCCCCCHHHH
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 406 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa---~~~~~~~~L~ea 406 (519)
.+.||+|+|||-+|-.+|+.|.+. .++.++|++ .++ +......+. -+..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 367999999999999999888541 357788873 221 222111121 011222468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCcc
Q 010044 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 478 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv 478 (519)
+++ +|++|-+.. . .+..+++++-.+ ..-.++-+|.-....+..-++|.+ .|. .+..|+-|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~--~G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIK--SKVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHH--TTCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHH--hCCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 899997632 2 356667665433 233456677622112222345543 353 34466557764
No 196
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=83.78 E-value=1.1 Score=44.49 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..||||+|||.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999998764 31 1268888875
No 197
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.77 E-value=0.89 Score=44.96 Aligned_cols=93 Identities=14% Similarity=0.172 Sum_probs=51.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHh
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav 407 (519)
....||.|+|+|..|.++|..+... |. +++++|+. .+ .+. .++.. .....++.|++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~----~~---~~~----~l~~~g~~~~~~~~e~~ 85 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT----PA---RAA----SLAALGATIHEQARAAA 85 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC----HH---HHH----HHHTTTCEEESSHHHHH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC----HH---HHH----HHHHCCCEeeCCHHHHH
Confidence 3457999999999999999998763 53 57777763 11 111 11111 11124677777
Q ss_pred cccCCcEEEeccCCCCCCCHHHHH---HHHcCCCCcEEEEcCC
Q 010044 408 KVIKPTILIGSSGVGRTFTKEVIE---AMASFNEKPLILALSN 447 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~---~Ma~~~erPIIFaLSN 447 (519)
+. +|++|= +.....-.++++. ......+..+|+-+|+
T Consensus 86 ~~--aDvVi~-~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 86 RD--ADIVVS-MLENGAVVQDVLFAQGVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp TT--CSEEEE-CCSSHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred hc--CCEEEE-ECCCHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence 65 677662 2211122333332 1122345567776765
No 198
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=83.59 E-value=1 Score=43.62 Aligned_cols=90 Identities=16% Similarity=0.197 Sum_probs=50.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~v 410 (519)
.||.|+|+|..|.++|..+... |. +++++|+.- + .+.. ++.. .....++.|+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~~----~---~~~~----~~~~g~~~~~~~~~~~~~- 59 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLVQ----S---AVDG----LVAAGASAARSARDAVQG- 59 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHH----HHHTTCEECSSHHHHHTT-
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCCH----H---HHHH----HHHCCCeEcCCHHHHHhC-
Confidence 5899999999999999998763 53 677777641 1 1111 1111 1123567777765
Q ss_pred CCcEEEeccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCC
Q 010044 411 KPTILIGSSGVGRTFTKEVIE---AMAS-FNEKPLILALSN 447 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~---~Ma~-~~erPIIFaLSN 447 (519)
+|++|= +.....-.++++. .+.. ..+..+|..+|+
T Consensus 60 -aDvvi~-~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st 98 (302)
T 2h78_A 60 -ADVVIS-MLPASQHVEGLYLDDDGLLAHIAPGTLVLECST 98 (302)
T ss_dssp -CSEEEE-CCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSC
T ss_pred -CCeEEE-ECCCHHHHHHHHcCchhHHhcCCCCcEEEECCC
Confidence 677663 2211122344444 3322 234556766665
No 199
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=83.57 E-value=0.99 Score=42.06 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=54.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhc
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~ 408 (519)
-...||.|+|+|..|..+|+.+... |. +++++|++- ++ +.. ++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~~-----g~-------~V~~~~r~~----~~---~~~----~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVGS-----GF-------KVVVGSRNP----KR---TAR----LFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSH----HH---HHH----HSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHH----HHHcCCceecHHHHHh
Confidence 3456899999999999999988652 52 588888641 11 111 1111000126778777
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 010044 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (519)
. +|++|=+.. +. ..+++++ ++...+..+|.-+||+.+
T Consensus 83 ~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 5 888873332 32 3444543 332225668888888763
No 200
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=83.46 E-value=1.9 Score=42.50 Aligned_cols=137 Identities=19% Similarity=0.171 Sum_probs=71.5
Q ss_pred cchhHHHHHHHHHHHH-HhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCC
Q 010044 308 QGTASVVLAGVVAALK-LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 386 (519)
Q Consensus 308 QGTaaV~LAgll~Alk-~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l 386 (519)
++.....++.-+.+++ ..+ - ..++|+|.|||..|..++.+... .|. ++++.+|+. ..| +
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~ 202 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSG-V-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---L 202 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTC-C-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---H
T ss_pred HHHhhhHHHHHHHHHHHhCC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---H
Confidence 3433334444556665 333 3 88999999999888877766543 353 478888763 111 2
Q ss_pred chhchhhccc--cCCCCCHHHHhcc---cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH-HHHh
Q 010044 387 QHFKKPWAHE--HEPVNNLLDAVKV---IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTA-EEAY 460 (519)
Q Consensus 387 ~~~k~~fa~~--~~~~~~L~eav~~---vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tp-e~A~ 460 (519)
...++. |.. .....++.+.++. -++|++|=+++.+ ...++.++.|+.. =.|.-++.+....++.+ .+.+
T Consensus 203 ~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~~ 277 (343)
T 2dq4_A 203 AFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALIPG---GEARILGIPSDPIRFDLAGELV 277 (343)
T ss_dssp GGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEEEE---EEEEECCCCSSCEEECHHHHTG
T ss_pred HHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHhcC---CEEEEEecCCCCceeCcHHHHH
Confidence 111221 321 0111356666653 2689999877632 2345566666532 23333444432234444 3332
Q ss_pred cccCCcEEEEc
Q 010044 461 TWSKGRAIFAS 471 (519)
Q Consensus 461 ~wt~G~aifAs 471 (519)
.++.-|..+
T Consensus 278 --~~~~~i~g~ 286 (343)
T 2dq4_A 278 --MRGITAFGI 286 (343)
T ss_dssp --GGTCEEEEC
T ss_pred --hCceEEEEe
Confidence 234445443
No 201
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=83.35 E-value=1.4 Score=46.47 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=60.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-----cccCCCCCHHHHh
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 407 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-----~~~~~~~~L~eav 407 (519)
||.|+|+|..|..+|..|.+. |. +++++|+.. ++ .....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999998753 53 577888641 11 111111100 0011235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010044 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (519)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (519)
+.. ++|++| ++...+...+++++.+... .+..||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488887 4443434567788777643 3456888899865
No 202
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.15 E-value=1.9 Score=41.50 Aligned_cols=91 Identities=13% Similarity=0.204 Sum_probs=58.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
.||.|+|+ |..|..+|..+... |. +++++|++ . +.+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-----g~-------~V~~~~r~----~---~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-----AH-------HLAAIEIA----P---EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-----SS-------EEEEECCS----H---HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CC-------EEEEEECC----H---HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 99999999998652 52 68888863 1 11111111 1 1111366777775
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010044 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (519)
+|++|= +..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 898883 333333 68888888754 3456777788854
No 203
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=83.05 E-value=0.96 Score=39.37 Aligned_cols=34 Identities=6% Similarity=0.160 Sum_probs=27.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
...+|+|+|+|..|..+++.|... | .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 356899999999999999998652 4 468888874
No 204
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=82.77 E-value=1.6 Score=42.14 Aligned_cols=91 Identities=13% Similarity=0.194 Sum_probs=51.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
.||.|+|+|..|..+|..+... | -+++++|++ .++ ....++. ......++.|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS----PEK---AEELAAL---GAERAATPCEVVES-- 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----GGG---GHHHHHT---TCEECSSHHHHHHH--
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC----HHH---HHHHHHC---CCeecCCHHHHHhc--
Confidence 5899999999999999998763 5 357777763 111 2111111 11123577787776
Q ss_pred CcEEEeccCCCCCCCHHHH---HHHHc-CCCCcEEEEcCC
Q 010044 412 PTILIGSSGVGRTFTKEVI---EAMAS-FNEKPLILALSN 447 (519)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv---~~Ma~-~~erPIIFaLSN 447 (519)
+|++| ++.....-.++++ +.+.+ ..+..+|.-+|+
T Consensus 58 aDvvi-~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 58 CPVTF-AMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp CSEEE-ECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred CCEEE-EEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCC
Confidence 77776 2222112333444 33322 234556666665
No 205
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=82.72 E-value=1.7 Score=43.10 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|.++|..+... |. -+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999998753 51 368888875
No 206
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.71 E-value=6.9 Score=39.62 Aligned_cols=128 Identities=17% Similarity=0.265 Sum_probs=64.9
Q ss_pred HHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-
Q 010044 319 VAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE- 396 (519)
Q Consensus 319 l~Alk~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~- 396 (519)
+.|+.... .--.+++|+|+|||+.|...+.+... .|. ++++.+|+. +.+..+++.
T Consensus 201 ~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~~~l 257 (404)
T 3ip1_A 201 YNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLAKEL 257 (404)
T ss_dssp HHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHHHHH
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHHHHc
Confidence 34443333 33457899999999888776655543 364 578877752 122223221
Q ss_pred ------cCCCCCHHHHhcc----cCCcEEEeccCCCCCCCHHHHHHHH-cCCCCcEEEEcCCCCCCCCCCHHHHhcccCC
Q 010044 397 ------HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAMA-SFNEKPLILALSNPTSQSECTAEEAYTWSKG 465 (519)
Q Consensus 397 ------~~~~~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~Ma-~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G 465 (519)
.....++.+.|+. -++|++|-+++......+..++.+. ...+.=-|..+..+....+......+. ++
T Consensus 258 Ga~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~--~~ 335 (404)
T 3ip1_A 258 GADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQV--RR 335 (404)
T ss_dssp TCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHH--TT
T ss_pred CCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhc--cc
Confidence 0111355555543 3699999877643223345555550 001222333344443334455544432 34
Q ss_pred cEEEEc
Q 010044 466 RAIFAS 471 (519)
Q Consensus 466 ~aifAs 471 (519)
.-|+.+
T Consensus 336 ~~i~g~ 341 (404)
T 3ip1_A 336 AQIVGS 341 (404)
T ss_dssp CEEEEC
T ss_pred eEEEEe
Confidence 444443
No 207
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=82.49 E-value=5.3 Score=39.26 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=51.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKV 409 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~ 409 (519)
..||.|+|+|..|.++|..|.+. |. ++++++|++- ..+... .+... .....++.|+++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~~-----~~~~~~----~~~~~g~~~~~~~~e~~~~ 83 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAAS-----AESWRP----RAEELGVSCKASVAEVAGE 83 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSSC-----HHHHHH----HHHHTTCEECSCHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCCC-----CHHHHH----HHHHCCCEEeCCHHHHHhc
Confidence 36899999999999999999875 52 4788888731 000011 11110 1112467777765
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCC
Q 010044 410 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 447 (519)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSN 447 (519)
+|++| ++... ....++++.+..+. +..||.-+|+
T Consensus 84 --aDvVi-~~vp~-~~~~~~~~~l~~~l~~~~ivvd~st 118 (312)
T 3qsg_A 84 --CDVIF-SLVTA-QAALEVAQQAGPHLCEGALYADFTS 118 (312)
T ss_dssp --CSEEE-ECSCT-TTHHHHHHHHGGGCCTTCEEEECCC
T ss_pred --CCEEE-EecCc-hhHHHHHHhhHhhcCCCCEEEEcCC
Confidence 66665 22222 22334555555432 4456665553
No 208
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=82.22 E-value=3 Score=44.54 Aligned_cols=98 Identities=14% Similarity=0.200 Sum_probs=62.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~eav~~ 409 (519)
.+|.|+|+|..|.++|..|... |. +++++|+. . +......+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----V---SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----T---HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----H---HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999998763 53 57777763 1 11222111111110 113688998875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010044 410 I-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (519)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (519)
+ +||++| ++...+...+++++.+..+ .+..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 488777 4444445677888887654 4667888898854
No 209
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=82.09 E-value=4.1 Score=39.33 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=63.0
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh----chhhcc-ccCCCCC
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 402 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~----k~~fa~-~~~~~~~ 402 (519)
+...||+|.|| |-.|..+++.|++. |. .-+++.+|+...- .....+... +..+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 99999999988764 52 2367777765321 111111111 111111 1122246
Q ss_pred HHHHhcccCCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEEcC
Q 010044 403 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 446 (519)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999877654211 356788887766666888543
No 210
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=81.94 E-value=6.1 Score=40.19 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=99.8
Q ss_pred CCCceeecCC---cchhHHHHHHHHHHHHHh------------------------C-CCcccceEEEeCcchHHHHHHHH
Q 010044 298 TTHLVFNDDI---QGTASVVLAGVVAALKLI------------------------G-GTLAEHRFLFLGAGEAGTGIAEL 349 (519)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~~------------------------g-~~l~d~riv~~GAGsAg~GIA~l 349 (519)
..|.|.|--- ..+|=-+++.+|+..|-. | ..|.+.+|.|+|.|..|..+|+.
T Consensus 107 ~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~ 186 (347)
T 1mx3_A 107 LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALR 186 (347)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHH
Confidence 4566666432 234445777788776621 2 46889999999999999999998
Q ss_pred HHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCC
Q 010044 350 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTF 425 (519)
Q Consensus 350 l~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~F 425 (519)
+.. .|+ +++.+|++- .. .. .+.+ ......+|.|+++. .|+++=.- ...+++
T Consensus 187 l~~-----~G~-------~V~~~d~~~----~~--~~---~~~~--g~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 187 AKA-----FGF-------NVLFYDPYL----SD--GV---ERAL--GLQRVSTLQDLLFH--SDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp HHT-----TTC-------EEEEECTTS----CT--TH---HHHH--TCEECSSHHHHHHH--CSEEEECCCCCTTCTTSB
T ss_pred HHH-----CCC-------EEEEECCCc----ch--hh---Hhhc--CCeecCCHHHHHhc--CCEEEEcCCCCHHHHHHh
Confidence 864 264 588888631 11 01 1111 01123479999987 89887532 224578
Q ss_pred CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEE-----cCCCCCccccCCEEecccCccceeechhhh
Q 010044 426 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFG 500 (519)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifA-----sGSPf~pv~~~G~~~~p~Q~NN~~iFPGig 500 (519)
+++.++.|. +..++.=.|+=..--|..-.+|++ +|+.--| ..-|+++ .+.. --..+|+.+-|=++
T Consensus 242 ~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~~~~--L~~~~nvi~tPHia 311 (347)
T 1mx3_A 242 NDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---SQGP--LKDAPNLICTPHAA 311 (347)
T ss_dssp SHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---TSST--TTTCSSEEECSSCT
T ss_pred HHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---CCch--HHhCCCEEEEchHH
Confidence 888888885 567888888743223333334443 3544322 2233221 1110 12478999999775
No 211
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=81.81 E-value=4.5 Score=40.80 Aligned_cols=140 Identities=14% Similarity=0.080 Sum_probs=86.5
Q ss_pred CCceeecCC---cchhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 010044 299 THLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (519)
Q Consensus 299 ~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (519)
.|+|.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~--- 166 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG--- 166 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT---
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH---
Confidence 455555422 23455667777776652 2456889999999999999999998753
Q ss_pred hhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 010044 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (519)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~ 431 (519)
.|+ +++.+|+... . ....+..-+ ...+|.|+++. .|+++=.- ...++++++.++
T Consensus 167 --~G~-------~V~~~d~~~~----~---~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 224 (330)
T 4e5n_A 167 --WGA-------TLQYHEAKAL----D---TQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELLA 224 (330)
T ss_dssp --SCC-------EEEEECSSCC----C---HHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHT
T ss_pred --CCC-------EEEEECCCCC----c---HhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHHh
Confidence 354 5888887531 1 111111111 12379999987 89888542 224689999999
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 010044 432 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (519)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~ai 468 (519)
.|. +..+|.=.|+-...-|-.-.+|++ .|+.-
T Consensus 225 ~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~ 256 (330)
T 4e5n_A 225 LVR---PGALLVNPCRGSVVDEAAVLAALE--RGQLG 256 (330)
T ss_dssp TSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hCC---CCcEEEECCCCchhCHHHHHHHHH--hCCcc
Confidence 886 678888888743222222334443 45544
No 212
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=81.74 E-value=3.6 Score=40.85 Aligned_cols=94 Identities=16% Similarity=0.161 Sum_probs=54.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH-Hhcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKV 409 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e-av~~ 409 (519)
-.||.|+|+|..|..+|..+... |. ..+++++|++- +.+...++.-+. .....++.| +++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~-~~~~~~~~~~~~~~ 94 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS 94 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSC-SEEESCTTGGGGGC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCc-chhcCCHHHHhhcc
Confidence 37999999999999999998764 64 14788888741 111111100000 001245666 6665
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLS 446 (519)
+|++| ++.... -.+++++.+..+ .+..||.-.+
T Consensus 95 --aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 --PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred --CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 77777 444443 346677766543 3455665544
No 213
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.65 E-value=3.1 Score=39.59 Aligned_cols=97 Identities=14% Similarity=0.165 Sum_probs=56.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
.||.|+|+|..|..+|..+... |.. .+++++|++. +.+...++.-... ....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHhc-----CCC-----cEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 3799999999999999988653 531 3688888641 1111111000000 012467777761 3
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHc-CCCCcEEEEcCCCC
Q 010044 412 PTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSNPT 449 (519)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSNPt 449 (519)
+|++| ++..+ ..+.++++.+.. ..+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 44333 355677777654 23556777777744
No 214
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=81.31 E-value=3.3 Score=43.51 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=62.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (519)
..||.|+|+|..|..+|..|... |. ++.++|+. .+ .+...++.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----TS---KTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HH---HHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----HH---HHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 36899999999999999998753 53 57777763 11 12222211100 01123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
. ++|++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 488877 44444456778888776543 456888888864
No 215
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.19 E-value=1.9 Score=41.54 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|.++|..+.+. | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999999875 5 357777764
No 216
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=81.05 E-value=1.3 Score=43.28 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||+|+|||.||+..|-.|.+. |+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-----G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-----GI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEecC
Confidence 4899999999999999988763 75 46667653
No 217
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.03 E-value=2.1 Score=40.90 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=49.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
.||.|+|+|..|..+|..+... |. +++++| + .++ .....+. ......++.|+++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~-~----~~~---~~~~~~~---g~~~~~~~~~~~~~-- 58 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT-I----GPV---ADELLSL---GAVNVETARQVTEF-- 58 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC-S----SCC---CHHHHTT---TCBCCSSHHHHHHT--
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc-C----HHH---HHHHHHc---CCcccCCHHHHHhc--
Confidence 4899999999999999988653 53 567766 3 111 2111111 11123567777764
Q ss_pred CcEEEeccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCC
Q 010044 412 PTILIGSSGVGRTFTKEVIE---AMAS-FNEKPLILALSNP 448 (519)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~---~Ma~-~~erPIIFaLSNP 448 (519)
+|++|=+.. ...-.++++. .+.+ ..+..+|+-+||-
T Consensus 59 ~D~vi~~vp-~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~ 98 (295)
T 1yb4_A 59 ADIIFIMVP-DTPQVEDVLFGEHGCAKTSLQGKTIVDMSSI 98 (295)
T ss_dssp CSEEEECCS-SHHHHHHHHHSTTSSTTSCCTTEEEEECSCC
T ss_pred CCEEEEECC-CHHHHHHHHhCchhHhhcCCCCCEEEECCCC
Confidence 777763321 1112344554 3322 2234566667764
No 218
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=80.85 E-value=1.4 Score=42.38 Aligned_cols=92 Identities=15% Similarity=0.209 Sum_probs=52.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~v 410 (519)
.||.|+|+|..|..+|..+... |. +++++|++. ++ +.. ++.. .....++.|+++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~----~~---~~~----~~~~g~~~~~~~~~~~~~- 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLME----AN---VAA----VVAQGAQACENNQKVAAA- 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSSH----HH---HHH----HHTTTCEECSSHHHHHHH-
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCCH----HH---HHH----HHHCCCeecCCHHHHHhC-
Confidence 5899999999999999988652 53 577787631 11 111 1111 1112467787775
Q ss_pred CCcEEEeccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCCC
Q 010044 411 KPTILIGSSGVGRTFTKEVIE---AMAS-FNEKPLILALSNPT 449 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~---~Ma~-~~erPIIFaLSNPt 449 (519)
+|++|=+.. ...-.++++. .+.. ..+..+|.-+||-.
T Consensus 61 -~D~vi~~vp-~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 61 -SDIIFTSLP-NAGIVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp -CSEEEECCS-SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred -CCEEEEECC-CHHHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 787774332 1123445553 2322 23456777777754
No 219
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=80.73 E-value=1.2 Score=40.62 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=58.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh-----chhhcc-ccCCCCCHH
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 404 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~-----k~~fa~-~~~~~~~L~ 404 (519)
.+|+|.|| |-.|..+++.|++. .| -++++++++. + ..+... +..+.. +..+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 88888888888732 35 3688887751 1 012111 111111 112224677
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++++. +|++|=+.+..+.-++.+++.|.+..-+-|||.=|
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 88875 89999777643333788899998766667887543
No 220
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.59 E-value=2.9 Score=41.05 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+-.||.|+|+|..|.++|..|... |. +++++|+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34457999999999999999999763 53 67778874
No 221
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=80.40 E-value=1.5 Score=41.36 Aligned_cols=96 Identities=13% Similarity=0.190 Sum_probs=57.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 408 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~ 408 (519)
+..||+|.|||-.|..+++.|++. | -+++.++++- ..+.+. ..+.. +..+..++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~-----g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ-----G-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 346899999999999999888763 5 3677777641 112111 11111 2222234566666
Q ss_pred ccCCcEEEeccCCCC-----------CCCHHHHHHHHcCCCCcEEEEcC
Q 010044 409 VIKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 409 ~vkptvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+ ++|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999996654311 12566777777655566787544
No 222
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=80.27 E-value=1.9 Score=43.29 Aligned_cols=123 Identities=21% Similarity=0.295 Sum_probs=74.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC--CCCHHHHhcc
Q 010044 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 409 (519)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~--~~~L~eav~~ 409 (519)
||.|+| +|..|..+|-+|... .++ ...+.|+|.+-. .++..-+|.+. ++-..... ..+..+++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 899999 899999999888542 133 257999999741 11111012221 11000000 0256788887
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHH---HHhccc---CCcEEE
Q 010044 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAE---EAYTWS---KGRAIF 469 (519)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe---~A~~wt---~G~aif 469 (519)
+|++|=+.+.+ |- +-+++++.+++++++-+|+-.|||.. .+.. ++++.+ .-+-+|
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd---~~t~~a~~~~k~sg~~p~~rv~ 144 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVN---TTVAIAAEVLKKAGVYDKNKLF 144 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHH---HHHHHHHHHHHHTTCCCTTSEE
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcch---hHHHHHHHHHHHcCCCCcceEE
Confidence 99988665543 21 12467778888999999999999962 2222 244433 234577
Q ss_pred EcC
Q 010044 470 ASG 472 (519)
Q Consensus 470 AsG 472 (519)
++|
T Consensus 145 G~~ 147 (312)
T 3hhp_A 145 GVT 147 (312)
T ss_dssp ECC
T ss_pred EEe
Confidence 777
No 223
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=80.17 E-value=1.1 Score=44.57 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=58.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh--chhhccccCCCCCHHHHhc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAHEHEPVNNLLDAVK 408 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~--k~~fa~~~~~~~~L~eav~ 408 (519)
..||.|+|+|+.|..+|..|.+. | .++.++|+.--+..-+...+... ...+........++.+ ++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LG 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cC
Confidence 46899999999999999999763 4 35788886311000000001000 0000000011135665 44
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010044 409 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (519)
.+|++| ++... ...+++++.++.. .+..+|..++|..
T Consensus 70 --~~D~Vi-lavk~-~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 --EQDVVI-VAVKA-PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp --CCSEEE-ECCCH-HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred --CCCEEE-EeCCc-hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 388887 44433 4567888887754 3567889999984
No 224
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=79.74 E-value=3.4 Score=43.47 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=60.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa-~~~~~~~~L~eav~~ 409 (519)
.||.|+|+|..|..+|..|... |. +++++|+.. + .+...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999998753 53 577887631 1 1111111 000 001113578888863
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
+ ++|++| ++...+...+++++.+..+- +..||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488877 44444446778888776543 456888898865
No 225
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.23 E-value=1 Score=43.98 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=59.8
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc---hh---chhhcc-ccCC
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---HF---KKPWAH-EHEP 399 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~---~~---k~~fa~-~~~~ 399 (519)
+++..+|+|.|| |-.|..|++.|++. | .+++.++++.- .....+. .. ...+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~-----g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDA-----H-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHT-----T-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 344578999999 99999999888753 4 36888887530 0000010 00 001111 1122
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 010044 400 VNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 443 (519)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~-erPIIF 443 (519)
..+|.++++..++|++|=+.+..++ -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2468888986679999988775432 3678888887665 445554
No 226
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=79.20 E-value=1.6 Score=42.26 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=28.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|+|+|||.||+..|..+.+. |. +++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-----g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-----GI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-----CC------CcEEEEecCC
Confidence 56899999999999999998652 53 2799999875
No 227
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=79.17 E-value=1.5 Score=41.80 Aligned_cols=34 Identities=12% Similarity=0.341 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998875 253 688999864
No 228
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=79.07 E-value=2.8 Score=37.93 Aligned_cols=96 Identities=9% Similarity=0.146 Sum_probs=58.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (519)
.||+|.|| |-.|..+++.|++. | .++++++++. ++...+.. ...+.. +..+..++.+++++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR-----G-------FEVTAVVRHP----EKIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT-----T-------CEEEEECSCG----GGCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHHC-----C-------CEEEEEEcCc----ccchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 88888888887652 4 3788888852 11111211 111111 22222467888885
Q ss_pred cCCcEEEeccCCCC----------CCCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999997765431 12456888888776667888544
No 229
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=79.02 E-value=1.1 Score=38.74 Aligned_cols=32 Identities=16% Similarity=0.394 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|+|+|+|..|..+|+.|... | .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----D-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 4789999999999999998752 5 368899884
No 230
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=78.49 E-value=1.3 Score=46.62 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=33.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345789999999999999999999875 75 689999976
No 231
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=78.20 E-value=1.9 Score=40.04 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|+|+|||.||+..|..|.+. | .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----R-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CCEEEEeCC
Confidence 5899999999999999998753 5 368899974
No 232
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=77.83 E-value=1.8 Score=42.37 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=58.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhc--hhhc-cccCCCCCHHHHhc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWA-HEHEPVNNLLDAVK 408 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k--~~fa-~~~~~~~~L~eav~ 408 (519)
.||.|+|||+-|..+|..|.+. | .++.++|+.-+ ..=+...+.-.. ..+. ++.....++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 5899999999999999988763 4 36888887531 000000010000 0000 00011134544 55
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 010044 409 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (519)
.+|++| ++..+ ...+++++.++.+ .+..+|+.+.|-..
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 488877 55544 4567899998764 45678888999864
No 233
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=77.74 E-value=3.6 Score=41.60 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=29.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV 379 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~ 379 (519)
.+|||+|||.||+..|..|.+. |. ..+|.++|+..-..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-----g~-----~~~V~li~~~~~~~ 40 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-----GF-----EGRISLIGDEPHLP 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEEECSSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-----Cc-----CCeEEEEECCCCCC
Confidence 4899999999999999998763 54 24699998865443
No 234
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=77.72 E-value=5.7 Score=38.72 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=25.8
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+| +|..|..+|..+... |. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-----G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-----GY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-----TC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 4899999 999999999988653 53 57888764
No 235
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=77.72 E-value=1.8 Score=41.78 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=24.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-|+|+|||.||+..|..|.+. |+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~-----G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCC
Confidence 489999999999999988763 65 46677764
No 236
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.38 E-value=6.5 Score=39.28 Aligned_cols=131 Identities=14% Similarity=0.115 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhh
Q 010044 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW 393 (519)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~f 393 (519)
+....+.|++..+....+++|+|.|||..|..++.++.. .|. +++.+|+. .+| +...++.+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~~l 231 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVISTS----PSK---KEEALKNF 231 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----GGG---HHHHHHTS
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHHHHHhc
Confidence 334445667766555478999999999988888776643 252 57777753 111 11111111
Q ss_pred -cc---ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEE
Q 010044 394 -AH---EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIF 469 (519)
Q Consensus 394 -a~---~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aif 469 (519)
|. +..+...+.++.. ++|++|=+++.. ...++.++.|+.. =-|.-++.+....+..+.+.+. ++.-|.
T Consensus 232 Ga~~v~~~~~~~~~~~~~~--~~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~~--~~~~i~ 303 (366)
T 1yqd_A 232 GADSFLVSRDQEQMQAAAG--TLDGIIDTVSAV-HPLLPLFGLLKSH---GKLILVGAPEKPLELPAFSLIA--GRKIVA 303 (366)
T ss_dssp CCSEEEETTCHHHHHHTTT--CEEEEEECCSSC-CCSHHHHHHEEEE---EEEEECCCCSSCEEECHHHHHT--TTCEEE
T ss_pred CCceEEeccCHHHHHHhhC--CCCEEEECCCcH-HHHHHHHHHHhcC---CEEEEEccCCCCCCcCHHHHHh--CCcEEE
Confidence 11 1011011223222 589998877644 3457888888642 2344455554333455544432 344454
Q ss_pred Ec
Q 010044 470 AS 471 (519)
Q Consensus 470 As 471 (519)
.+
T Consensus 304 g~ 305 (366)
T 1yqd_A 304 GS 305 (366)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 237
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.33 E-value=1.7 Score=41.70 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=25.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 4899999999999999988652 42 57888763
No 238
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.19 E-value=2.1 Score=40.14 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+|+|+|||.||+..|..+.+. |. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 46899999999999999988763 53 58999997
No 239
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.07 E-value=4.7 Score=38.26 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988653 52 58888864
No 240
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.06 E-value=3.1 Score=40.53 Aligned_cols=91 Identities=12% Similarity=0.222 Sum_probs=49.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
..||.|+|+|..|.++|..+... |. +++++|++ .++ +...++. ......++.|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~~~---~~~~~~~---g~~~~~~~~~~~~-- 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR----IEA---MTPLAEA---GATLADSVADVAA-- 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS----TTT---SHHHHHT---TCEECSSHHHHTT--
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHH---HHHHHHC---CCEEcCCHHHHHh--
Confidence 35899999999999999998653 53 57778864 221 2221111 0111246666665
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 010044 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSN 447 (519)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 447 (519)
+|++| ++.......+++++.+.+. .+.-||.-+|+
T Consensus 71 -aDvvi-~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 71 -ADLIH-ITVLDDAQVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp -SSEEE-ECCSSHHHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred -CCEEE-EECCChHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 56665 2221122334555555432 23445555554
No 241
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=77.04 E-value=1.2 Score=41.03 Aligned_cols=95 Identities=14% Similarity=0.140 Sum_probs=52.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh-chhhcc-ccCCCCCHHHH-hcc
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLLDA-VKV 409 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~-k~~fa~-~~~~~~~L~ea-v~~ 409 (519)
||+|+|+|..|..+|+.|.+. | .++.++|++ .++-+.+... ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 799999999999999998753 4 368889874 1110111110 001111 11111245555 44
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHc-CCCCcEEEEcCC
Q 010044 410 IKPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSN 447 (519)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSN 447 (519)
++|++|-++... .....+..+++ .+..+-|++.+|
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 599999766533 22334444444 356666777665
No 242
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=76.89 E-value=2.1 Score=40.93 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999998864 25 3688999864
No 243
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=76.88 E-value=1.6 Score=48.34 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|++.||+|+|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57889999999999999999999876 75 699999987
No 244
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=76.86 E-value=2.5 Score=41.31 Aligned_cols=93 Identities=18% Similarity=0.257 Sum_probs=55.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc---c--------cc-CC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--------EH-EP 399 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa---~--------~~-~~ 399 (519)
.||.|+|+|..|..+|..|.+. | .+++++|++.- .+...++... . .. ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999988653 4 25788887421 0111111100 0 00 01
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 010044 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSN 447 (519)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 447 (519)
..++.++++. +|++|=+.. . ...+++++.++.. .+..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2578888875 888774332 2 3458888888654 33556666644
No 245
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=76.66 E-value=2.2 Score=40.38 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+|||+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999988865 253 68899986
No 246
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=76.55 E-value=2.2 Score=42.97 Aligned_cols=35 Identities=31% Similarity=0.502 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
++|||+|||.||+..|..|.+. |.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-----KYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-----CcC-----CCEEEEeCCC
Confidence 5899999999999999998763 542 3799999875
No 247
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=76.55 E-value=18 Score=36.56 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=71.8
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 010044 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (519)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (519)
|..|.+.++.|+|.|..|..+|+.+... |+ +++..|+. .+ + ......+ ...+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~~----~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKGC----VYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTTC----EECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcCc----eecCHHH
Confidence 4678899999999999999999988543 64 57777753 11 1 1111111 1257999
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc-c-cCCcEEEE
Q 010044 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT-W-SKGRAIFA 470 (519)
Q Consensus 406 av~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~-w-t~G~aifA 470 (519)
.++. .|+++=.- ..-++|+++.++.|. +..++.=.|. -++-=|+|+- . ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR----GKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc----cccccHHHHHHHHHhCCceEE
Confidence 9987 89887431 224699999999996 5667765554 4555444432 1 35654433
No 248
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=76.53 E-value=5.1 Score=38.68 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=61.2
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCc---cCCchhchhhcc-ccCCCC
Q 010044 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 401 (519)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~---~~l~~~k~~fa~-~~~~~~ 401 (519)
+++++.+|+|.|| |-.|..+++.|++. | -+++++|+..- ... ..+. +..+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQ-----G-------HEILVIDNFAT---GKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGG-----T-------CEEEEEECCSS---SCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHC-----C-------CEEEEEECCCc---cchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 88888888877642 4 36888887411 100 1110 111111 112223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 402 NLLDAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++.++++.+++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57777875579999988775432 0235667766555567888544
No 249
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=76.48 E-value=11 Score=38.84 Aligned_cols=114 Identities=13% Similarity=0.147 Sum_probs=63.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhc
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~ 408 (519)
++.+||+|+|.|-+|++.|+.+.+ .|. ++...|++-..... ..|. .-.++-.. ..-.++++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g----~~~~~~~~ 63 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTG----SLNDEWLM 63 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEES----SCCHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEEC----CCcHHHhc
Confidence 567899999999999999877653 363 57788885431100 1121 11111000 11256676
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEE
Q 010044 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKV 484 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~ 484 (519)
.+|.+|=.++.+- -.+++..+... ..|++ + | .|-++...+.+.|--||| ||||
T Consensus 64 --~~d~vV~s~gi~~-~~p~~~~a~~~--~~~v~---~------~--~~~~~~~~~~~vI~VTGT-------nGKT 116 (439)
T 2x5o_A 64 --AADLIVASPGIAL-AHPSLSAAADA--GIEIV---G------D--IELFCREAQAPIVAITGS-------NGKS 116 (439)
T ss_dssp --TCSEEEECTTSCT-TCHHHHHHHHT--TCEEE---C------H--HHHHHHHCCSCEEEEECS-------SSHH
T ss_pred --cCCEEEeCCCCCC-CCHHHHHHHHC--CCcEE---E------H--HHHHHHhcCCCEEEEECC-------CCHH
Confidence 4888775555442 34666654431 33433 2 1 223333345778888997 7774
No 250
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=76.28 E-value=7.9 Score=35.25 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=59.0
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea 406 (519)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+...+..+.. +..+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44678999995 78888888888763 52 12788888752 111111111111111 21222456677
Q ss_pred hcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 407 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++ ++|++|=+.+.... -+..+++.|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 76 49999988764310 1346777787665567887544
No 251
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=76.07 E-value=5.8 Score=38.23 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=58.3
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHH
Q 010044 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLL 404 (519)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ 404 (519)
++++..+|+|.|| |-.|..+++.|++. | -+++.+|+.- .. ..+ .+.. +..+..++.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~----~~-~~~-----~~~~~Dl~d~~~~~ 72 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQ-----G-------RTVRGFDLRP----SG-TGG-----EEVVGSLEDGQALS 72 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHT-----T-------CCEEEEESSC----CS-SCC-----SEEESCTTCHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhC-----C-------CEEEEEeCCC----CC-CCc-----cEEecCcCCHHHHH
Confidence 4577889999998 99999999888753 5 3677777742 11 111 1111 222224577
Q ss_pred HHhcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcC
Q 010044 405 DAVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 446 (519)
++++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 73 ~~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 73 DAIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8887 499999877654211 245788887776678888655
No 252
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=75.96 E-value=4.5 Score=38.06 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.5
Q ss_pred eEEEeCcchHHHHHHHHHHH
Q 010044 333 RFLFLGAGEAGTGIAELIAL 352 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~ 352 (519)
||.|+|+|..|..+|..|..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~ 21 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS 21 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHH
Confidence 79999999999999999875
No 253
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=75.83 E-value=2.4 Score=41.95 Aligned_cols=38 Identities=18% Similarity=0.084 Sum_probs=28.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+.+..+|+|+|||.||+..|..|.+. |+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQN-----GW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEecCCC
Confidence 34567999999999999999988753 53 6888887543
No 254
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=75.36 E-value=2.4 Score=42.22 Aligned_cols=31 Identities=39% Similarity=0.580 Sum_probs=26.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
.++|.|+|+|..|.+||..++ + |. +++++|+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~ 42 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDV 42 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECS
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEEC
Confidence 469999999999999999997 6 53 5777776
No 255
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=75.34 E-value=7 Score=39.67 Aligned_cols=92 Identities=22% Similarity=0.352 Sum_probs=69.9
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 010044 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (519)
Q Consensus 310 TaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (519)
-.-+|-.|++--|+-.+.+|+..++|++|.+. .|.-+|-||.. .|. .+.+|.|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 34567789999999999999999999999664 57777777754 243 34455432
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 010044 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 445 (519)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (519)
..+|.+.+++ +|++|...+.++.++.|+|| +.-+|.=.
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk------~GavVIDV 250 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK------QGAVVVDA 250 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC------TTCEEEEC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc------CCCEEEEe
Confidence 1368888887 99999999999999999996 45566543
No 256
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=74.92 E-value=2.9 Score=42.40 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV 379 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~ 379 (519)
+.-||||+|||.||+..|+.|. . .| -+|.++|+.--+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~----~-~~-------~~itlie~~~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL----G-KC-------DDITMINSEKYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT----T-TC-------SCEEEECSSSSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh----C-CC-------CEEEEEECCCCCC
Confidence 3458999999999999999981 1 12 4799998865443
No 257
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=74.86 E-value=2 Score=40.74 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+|||+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999998763 53 58888884
No 258
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=74.82 E-value=8.8 Score=37.06 Aligned_cols=104 Identities=14% Similarity=0.211 Sum_probs=59.7
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch-hchhhcc-ccCCCCCHH
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHEPVNNLL 404 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~-~k~~fa~-~~~~~~~L~ 404 (519)
.++..+|+|.|| |-.|..+++.|++. | -+++++|+.. ....+.+.. .+..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLER-----G-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHC-----C-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999985 88888888888652 5 3688888752 111111211 0111111 212223577
Q ss_pred HHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 405 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 78877789999987765432 0345677776655567888543
No 259
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=74.70 E-value=2.6 Score=42.41 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=29.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
...+|||+|||.||+..|..|.+. |.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-----GFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-----CcC-----CCEEEEecCCC
Confidence 357899999999999999999763 542 36889988643
No 260
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=74.66 E-value=4.7 Score=40.32 Aligned_cols=77 Identities=16% Similarity=0.132 Sum_probs=43.3
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc---ccC-CCCC
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHE-PVNN 402 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~---~~~-~~~~ 402 (519)
.--.+++|+|+|||..|...+.+.... |. ++++.+|+. +.| +.-.++-=|. +.. ...+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~-----Ga------~~Vi~~~~~----~~~---~~~a~~lGa~~vi~~~~~~~~ 251 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTA-----GA------SRIIGIDID----SKK---YETAKKFGVNEFVNPKDHDKP 251 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSC----TTH---HHHHHTTTCCEEECGGGCSSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEcCC----HHH---HHHHHHcCCcEEEccccCchh
Confidence 334578999999998888777665432 63 578888752 121 1111110010 111 1245
Q ss_pred HHHHhccc---CCcEEEeccCC
Q 010044 403 LLDAVKVI---KPTILIGSSGV 421 (519)
Q Consensus 403 L~eav~~v---kptvLIG~S~~ 421 (519)
+.+.++.. ++|++|=+++.
T Consensus 252 ~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 252 IQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp HHHHHHHHTTSCBSEEEECSCC
T ss_pred HHHHHHHhcCCCCCEEEECCCC
Confidence 66655533 68999887764
No 261
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=74.60 E-value=2.4 Score=40.25 Aligned_cols=90 Identities=14% Similarity=0.183 Sum_probs=48.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKP 412 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkp 412 (519)
||.|+|+|..|..+|..+.. |. +++++|+.. ++ ....++.=++ ... +.|+++. +
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~~----~~---~~~~~~~g~~---~~~-~~~~~~~--~ 56 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRTF----EK---ALRHQEEFGS---EAV-PLERVAE--A 56 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSST----HH---HHHHHHHHCC---EEC-CGGGGGG--C
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCCH----HH---HHHHHHCCCc---ccC-HHHHHhC--C
Confidence 79999999999999988752 42 477777631 11 1111110000 011 5555654 7
Q ss_pred cEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010044 413 TILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (519)
Q Consensus 413 tvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (519)
|++|=+.. .....+++++.+.+. .+..+|+-+||..
T Consensus 57 D~vi~~v~-~~~~~~~v~~~l~~~l~~~~~vv~~s~~~ 93 (289)
T 2cvz_A 57 RVIFTCLP-TTREVYEVAEALYPYLREGTYWVDATSGE 93 (289)
T ss_dssp SEEEECCS-SHHHHHHHHHHHTTTCCTTEEEEECSCCC
T ss_pred CEEEEeCC-ChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 77764332 212245566555432 2355666677643
No 262
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=74.51 E-value=2.5 Score=40.41 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-----Q-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-----C-------CcEEEEeCC
Confidence 46899999999999999888653 5 368899987
No 263
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=73.90 E-value=13 Score=36.14 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=61.8
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch-hchhhcc-ccC-CCCCH
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 403 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~-~k~~fa~-~~~-~~~~L 403 (519)
++...||+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. .+..+.. +.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 366789999995 99999999988763 13 3688888742 11111111 1112222 212 22357
Q ss_pred HHHhcccCCcEEEeccCCCC----------------CCCHHHHHHHHcCCCCcEEEEcC
Q 010044 404 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
.+++++ +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778885 999997665432 23467888888777 78888655
No 264
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=73.87 E-value=3.8 Score=40.64 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4689999999999999988865 364 6889998743
No 265
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=73.81 E-value=2.3 Score=43.36 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+||||+|||.||+..|..|.+. +- .-+|.|+|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999998754 21 1368888875
No 266
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=73.71 E-value=2.5 Score=41.30 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=27.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
++-.|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~-----G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 346899999999999999988763 53 577788765
No 267
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=73.58 E-value=3 Score=41.56 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=27.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
-+..+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 4457899999999999999998763 64 577788754
No 268
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=73.57 E-value=2.1 Score=42.19 Aligned_cols=99 Identities=18% Similarity=0.253 Sum_probs=55.8
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC----------CccccCCccCCchhchhhcccc
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK----------GLIVSSRKDSLQHFKKPWAHEH 397 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~----------GLi~~~R~~~l~~~k~~fa~~~ 397 (519)
.....||.|+|||+-|..+|..|.+. |. ++.++ ++ |+..... ..+ +....
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~-----G~-------~V~l~-~~~~~~~~i~~~g~~~~~~-----~~~--~~~~~ 75 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARA-----GH-------EVILI-ARPQHVQAIEATGLRLETQ-----SFD--EQVKV 75 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEE-CCHHHHHHHHHHCEEEECS-----SCE--EEECC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHC-----CC-------eEEEE-EcHhHHHHHHhCCeEEEcC-----CCc--EEEee
Confidence 45568999999999999999999763 42 44444 32 1111100 000 00000
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCCC
Q 010044 398 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTSQ 451 (519)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~~ 451 (519)
....++.+ ++ .+|++| ++... ...+++++.++.+- +..+|..++|....
T Consensus 76 ~~~~~~~~-~~--~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 76 SASSDPSA-VQ--GADLVL-FCVKS-TDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp EEESCGGG-GT--TCSEEE-ECCCG-GGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred eeeCCHHH-cC--CCCEEE-EEccc-ccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 00134433 44 488777 44433 36789999987643 45688889998753
No 269
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=73.44 E-value=3.3 Score=36.27 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-+++|+|+|.+|+..|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999988753 4 478889875
No 270
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=73.34 E-value=3.1 Score=39.89 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+..|+|+|||.+|+.+|-.|.+. |. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-----G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-----GH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 45899999999999999998763 63 68899987
No 271
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=75.50 E-value=0.71 Score=43.09 Aligned_cols=92 Identities=11% Similarity=0.080 Sum_probs=53.9
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhc
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~ 408 (519)
+.+.||.|+|+|..|..+|+.+... |. +++++|+.-- + +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G~-------~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----GY-------SVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 5567899999999999999988653 42 4666666421 1 111 111111125666666
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 010044 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (519)
. +|++| ++..+. -+++++ .++...+..+|.-++|..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~-~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLA-ELADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 77766 333332 345555 233233456888899976
No 272
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=73.13 E-value=3 Score=39.73 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-----GF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCC
Confidence 46899999999999999988653 53 68899985
No 273
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=73.12 E-value=3 Score=43.92 Aligned_cols=88 Identities=18% Similarity=0.200 Sum_probs=50.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHH
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLD 405 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~e 405 (519)
..|...|++|+|.+.-..++++.|.+ .|+. -+.+.-.. ..+.+... +...- ..+...+++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~------vv~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAH------TVAAVVPA------RAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCE------EEEEEESS------CCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCE------EEEEEECC------CChhhhhC--ccCcEEeCCHHHHHH
Confidence 45788999999999999999998843 4762 22222111 11111110 00000 011234777
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 010044 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (519)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (519)
.++..+||.+||-|- .+.+.+.+ .-|.|
T Consensus 370 ~i~~~~pDllig~~~-----~~~~a~k~----gip~~ 397 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH-----ALASARRL----GVPLL 397 (458)
T ss_dssp HHHHHTCSEEEECTT-----HHHHHHHT----TCCEE
T ss_pred HHHhcCCCEEEEChh-----HHHHHHHc----CCCEE
Confidence 888899999999654 23444444 46765
No 274
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=73.06 E-value=2.9 Score=40.78 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=28.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+..|||+|||.+|+.+|..|.+. | .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~-----G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKE-----N-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEeCCCC
Confidence 46899999999999999998763 5 36899998643
No 275
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=72.94 E-value=2.9 Score=41.67 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999998865 363 688888764
No 276
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=72.94 E-value=3.1 Score=41.65 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 13 4788888765
No 277
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=72.67 E-value=12 Score=39.91 Aligned_cols=119 Identities=19% Similarity=0.127 Sum_probs=72.8
Q ss_pred CCceeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHhh
Q 010044 299 THLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (519)
Q Consensus 299 ~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (519)
.+.|.|--- ..+|=-++|.+++..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 89 gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~---- 164 (529)
T 1ygy_A 89 GVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF---- 164 (529)
T ss_dssp TCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT----
T ss_pred CeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC----
Confidence 455555432 23455577777776653 25678999999999999999999988642
Q ss_pred cCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 010044 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (519)
Q Consensus 358 ~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~M 433 (519)
|+ +++.+|+.- .+ ...+..=+. ..++.|+++. +|+++=.. ...++++++.+..|
T Consensus 165 -G~-------~V~~~d~~~----~~----~~a~~~g~~----~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~~ 222 (529)
T 1ygy_A 165 -GA-------YVVAYDPYV----SP----ARAAQLGIE----LLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAKT 222 (529)
T ss_dssp -TC-------EEEEECTTS----CH----HHHHHHTCE----ECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred -CC-------EEEEECCCC----Ch----hHHHhcCcE----EcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhCC
Confidence 53 688888642 11 000000011 1267788876 78776442 22346776666666
Q ss_pred HcCCCCcEEEEcC
Q 010044 434 ASFNEKPLILALS 446 (519)
Q Consensus 434 a~~~erPIIFaLS 446 (519)
. +..+|.=.|
T Consensus 223 k---~g~ilin~a 232 (529)
T 1ygy_A 223 K---PGVIIVNAA 232 (529)
T ss_dssp C---TTEEEEECS
T ss_pred C---CCCEEEECC
Confidence 4 556777666
No 278
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=72.54 E-value=3.5 Score=41.57 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=29.3
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
..+.+..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 345677999999999999999998764 3 147899998
No 279
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=72.53 E-value=3.5 Score=41.10 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=27.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
...+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-----GV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEecCC
Confidence 456899999999999999998763 64 567777653
No 280
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=72.46 E-value=3.2 Score=40.37 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 5689999999999999988864 25 3688999864
No 281
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=72.34 E-value=3 Score=41.29 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+.+|+|+|||.||+..|..|.+. |+ ++.++|+..-
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-----GH-------RVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCCCC
Confidence 46899999999999999998763 64 5788887543
No 282
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=72.23 E-value=10 Score=36.13 Aligned_cols=93 Identities=12% Similarity=0.203 Sum_probs=58.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (519)
.||+|.|| |-.|..+++.|++. | -+++.+++. .+... +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----G-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 99999999888763 5 368888886 22211 22 111211 222 345777777
Q ss_pred cCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++|++|=+.+..+. -+..+++++.+..-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 59999988775432 1467888887766666888543
No 283
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=72.17 E-value=4.4 Score=40.45 Aligned_cols=40 Identities=25% Similarity=0.364 Sum_probs=25.7
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
...++..|||++||..+.. .+ .....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~-s~---p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV-TG---PGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST-HH---HHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc-hH---HHHHHHHHcCCCEEEEecc
Confidence 4567888999999987633 11 1222344557899975555
No 284
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=72.14 E-value=2.7 Score=42.97 Aligned_cols=41 Identities=24% Similarity=0.348 Sum_probs=30.5
Q ss_pred hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 325 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 325 ~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
.++.-+..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 5 ~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 5 IGKVKGSHSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCSCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred hhcccCCCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 34444567999999999999999988753 5 35777776543
No 285
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=72.12 E-value=3.3 Score=38.83 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=26.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEE-EecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~l-vDs~ 375 (519)
..+|||+|||.||+..|..|.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988763 53 4556 8873
No 286
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=72.07 E-value=3.4 Score=41.17 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=25.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecC
Confidence 699999999999999999764 53 67777764
No 287
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=71.98 E-value=2.9 Score=39.36 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC
Confidence 489999999999999988754 24 367888763
No 288
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=71.81 E-value=3.1 Score=39.74 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|+|+|||.+|+..|..|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-----G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 4799999999999999998763 64 578888763
No 289
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=71.49 E-value=7.3 Score=37.11 Aligned_cols=101 Identities=15% Similarity=0.244 Sum_probs=57.8
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCcc--CCchh----chhhcc-ccCCCC
Q 010044 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 401 (519)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~--~l~~~----k~~fa~-~~~~~~ 401 (519)
++.+|+|.|| |-.|..+++.|++. | -+++++|++. +... .+... +..+.. +..+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEK-----G-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-----C-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4578999998 88888888888652 5 3688888742 1100 01000 011111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC------C----------CHHHHHHHHcCCC-CcEEEEcC
Q 010044 402 NLLDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 446 (519)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~------F----------t~evv~~Ma~~~e-rPIIFaLS 446 (519)
++.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888789999988875421 0 3345555554443 67888644
No 290
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=71.41 E-value=3.9 Score=40.07 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~-~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+..|+|+|||.+|+.+|-.|.+ . | ..++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-----G------~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-----G------ITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-----C------CCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-----C------CCcEEEEeCCC
Confidence 5689999999999999999976 3 5 13689999875
No 291
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.22 E-value=2.5 Score=41.20 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..||.|+|+|..|.++|..|.+. |. +++++|+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 35899999999999999998763 53 57777764
No 292
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=71.20 E-value=3.3 Score=40.48 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+..|+|+|||.+|+.+|..|.+. |. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-----G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-----GE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 46799999999999999998763 53 599999874
No 293
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=71.15 E-value=6.6 Score=37.39 Aligned_cols=78 Identities=13% Similarity=0.177 Sum_probs=44.6
Q ss_pred CcccceEEEeCc-ch--HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc------ccC
Q 010044 328 TLAEHRFLFLGA-GE--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 398 (519)
Q Consensus 328 ~l~d~riv~~GA-Gs--Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~------~~~ 398 (519)
.+++.++||.|| |. .|.++|+.+++ .| -+++++|++-+ . +.+...++.+.+ +..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 477889999997 34 67777777765 25 36888888640 0 112221111111 111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCC
Q 010044 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (519)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (519)
...++.++++.+ ++|+||=..+..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 223455555554 789999877654
No 294
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=70.78 E-value=3.6 Score=38.83 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|+|+|||.||+..|..+.+. |. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-----GV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-----CC------CcEEEEcCC
Confidence 3799999999999999988653 53 278899985
No 295
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=70.57 E-value=3.2 Score=42.61 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=27.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
||||+|||.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999988653 43 13688998754
No 296
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=70.19 E-value=3.7 Score=40.03 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=28.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+..|+|+|||.+|+.+|-.|.+. | .++.++|+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-----G-------~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-----G-------VKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCCC
Confidence 35799999999999999998763 5 36899998754
No 297
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=70.03 E-value=4 Score=40.85 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|+|+|||.||+..|..|.+. |+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-----G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-----GI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCC
Confidence 46899999999999999988763 64 2377777653
No 298
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=70.03 E-value=6.7 Score=36.57 Aligned_cols=92 Identities=14% Similarity=0.176 Sum_probs=56.1
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHH
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLD 405 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~e 405 (519)
.++..||+|.|| |-.|..+++.|++. |. +.. .......+.. +..+..++.+
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~-----g~---------------------~~~-~~~~~~~~~~~D~~d~~~~~~ 55 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADG-----AG---------------------LPG-EDWVFVSSKDADLTDTAQTRA 55 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTT-----TC---------------------CTT-CEEEECCTTTCCTTSHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhc-----CC---------------------ccc-ccccccCceecccCCHHHHHH
Confidence 366789999996 88999998888653 43 000 0000000111 1111235788
Q ss_pred HhcccCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 406 AVKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 406 av~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 56 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 56 LFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 8888889999988775431 1234678877766667888544
No 299
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=70.02 E-value=7.2 Score=36.61 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=58.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (519)
||+|.|| |-.|..+++.|.+. .| .+++.++++. ++...+......+.. +-.+..+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88999998886541 13 3677777642 111112111112221 21222468888886
Q ss_pred CCcEEEeccCCCCC------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 411 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 411 kptvLIG~S~~~g~------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
.|++|=+.+.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999987765321 2467888888766677888533
No 300
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=69.75 E-value=4.2 Score=40.10 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988764 64 577887654
No 301
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=69.70 E-value=6 Score=39.53 Aligned_cols=88 Identities=13% Similarity=0.151 Sum_probs=53.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHh
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav 407 (519)
|+..||.|+|+|..|.++|..+... |. +++++|+.. .+ .. ..++. .-...++.+++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~~----~~--~~-----~~a~~~G~~~~~~~e~~ 70 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRSG----SA--TV-----AKAEAHGLKVADVKTAV 70 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCTT----CH--HH-----HHHHHTTCEEECHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECCh----HH--HH-----HHHHHCCCEEccHHHHH
Confidence 3456899999999999999988653 53 577777642 10 01 11111 00112788888
Q ss_pred cccCCcEEEeccCCCCCCCHHHHH-HHHcCC-CCcEEE
Q 010044 408 KVIKPTILIGSSGVGRTFTKEVIE-AMASFN-EKPLIL 443 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~-~Ma~~~-erPIIF 443 (519)
+. +|++| ++.+.. ..+++++ .++.+- +..+|.
T Consensus 71 ~~--aDvVi-lavp~~-~~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 71 AA--ADVVM-ILTPDE-FQGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HT--CSEEE-ECSCHH-HHHHHHHHHTGGGCCTTCEEE
T ss_pred hc--CCEEE-EeCCcH-HHHHHHHHHHHhhCCCCCEEE
Confidence 85 89887 444443 3378887 765433 344444
No 302
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=69.65 E-value=3.8 Score=39.77 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999998763 53 68999987543
No 303
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=69.64 E-value=2.7 Score=39.79 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=26.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
...+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA-----NL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-----TC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEccC
Confidence 456899999999999999988652 53 56778853
No 304
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=69.52 E-value=4.4 Score=34.35 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=27.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
...+|+|+|+|..|..+|+.|.+. | .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-----g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-----G-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEECC
Confidence 346899999999999999998753 5 368888874
No 305
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=69.39 E-value=12 Score=37.34 Aligned_cols=137 Identities=19% Similarity=0.246 Sum_probs=75.1
Q ss_pred cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCcc
Q 010044 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 384 (519)
Q Consensus 305 DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~ 384 (519)
++.++.....++..+.|++..+.+ .+++|+|.|||..|...+.+... .|. ++++.+|+.
T Consensus 158 ~~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~--------- 216 (370)
T 4ej6_A 158 DPVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ--------- 216 (370)
T ss_dssp CTTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC---------
T ss_pred CHHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC---------
Confidence 344555455566667777655543 56899999999888776655543 363 578877753
Q ss_pred CCchhchhhccc-------cCCCCCHHHHhcc---c---CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC-
Q 010044 385 SLQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS- 450 (519)
Q Consensus 385 ~l~~~k~~fa~~-------~~~~~~L~eav~~---v---kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~- 450 (519)
+.+..+++. .....++.+.++. . ++|++|=+++.+ ..-++.++.++. .=-|.-+..+..
T Consensus 217 ---~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~~---~G~vv~~G~~~~~ 289 (370)
T 4ej6_A 217 ---ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAKA---GGTVVILGVLPQG 289 (370)
T ss_dssp ---HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECSCCCTT
T ss_pred ---HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhcc---CCEEEEEeccCCC
Confidence 122223321 0112456666654 1 579998877633 233455555543 222333443332
Q ss_pred -CCCCCHHHHhcccCCcEEEEc
Q 010044 451 -QSECTAEEAYTWSKGRAIFAS 471 (519)
Q Consensus 451 -~~E~tpe~A~~wt~G~aifAs 471 (519)
..+..+.+.+. ++.-|..+
T Consensus 290 ~~~~~~~~~~~~--~~~~i~g~ 309 (370)
T 4ej6_A 290 EKVEIEPFDILF--RELRVLGS 309 (370)
T ss_dssp CCCCCCHHHHHH--TTCEEEEC
T ss_pred CccccCHHHHHh--CCcEEEEe
Confidence 35666666543 45555554
No 306
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=69.25 E-value=4.3 Score=42.29 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
...+|+|+|+|.||+..|..|.+. |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 357899999999999999998764 53 588898753
No 307
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=69.24 E-value=2.4 Score=45.81 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 357889999999999999999999875 75 799999976
No 308
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=69.20 E-value=4.2 Score=41.69 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-----G-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46899999999999999888652 5 379999986
No 309
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=69.03 E-value=4.2 Score=40.82 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=29.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
+..|||+|||.||+.+|-.|.+. |. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-----G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-----GY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-----CC------CcEEEEeCCCCC
Confidence 45799999999999999988763 63 379999987553
No 310
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=68.96 E-value=15 Score=34.84 Aligned_cols=95 Identities=13% Similarity=0.211 Sum_probs=54.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
+|+|.|| |-.|..+++.|++. | .++.+++.. ..+...+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~-----g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSES-----N--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT-----S--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHhC-----C--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7889997 88888888877542 3 344444321 11111111111111113333 67888888 4
Q ss_pred CcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 010044 412 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 412 ptvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 446 (519)
+|++|-+.+.... . |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1 234777787766678998655
No 311
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=68.91 E-value=3.5 Score=45.89 Aligned_cols=37 Identities=27% Similarity=0.462 Sum_probs=32.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 3788999999999999999999865 75 7999999863
No 312
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=68.74 E-value=4.4 Score=40.01 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=29.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
+..|||+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-----G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-----GH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCCCC
Confidence 35799999999999999988763 63 68999987554
No 313
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=68.63 E-value=4 Score=42.23 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|+|+|||.||+..|..+.+.. ..|++ ..++.++|+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~----~~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAE----IPELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCC----CCEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCC----CCcEEEEEcCC
Confidence 48999999999999999997632 12541 01388999863
No 314
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=68.62 E-value=3.4 Score=39.44 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=27.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
...+|+|+|||.||+..|..|.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 456899999999999999998763 53 5788887
No 315
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=68.57 E-value=6.1 Score=39.92 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=30.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV 379 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~ 379 (519)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAERP 45 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSCC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCCc
Confidence 46799999999999999999764 53 13699999876443
No 316
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=68.46 E-value=3.7 Score=42.11 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
..+|||+|||.||+..|..|.+.. .| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 468999999999999999987641 12 47888888654
No 317
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=68.33 E-value=5 Score=39.13 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999998865 25 3799999764
No 318
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=68.32 E-value=3.8 Score=42.55 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=62.9
Q ss_pred cceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEe--cCCc---cccCCccCCchhchhhccccCCCCCHH
Q 010044 331 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (519)
Q Consensus 331 d~riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvD--s~GL---i~~~R~~~l~~~k~~fa~~~~~~~~L~ 404 (519)
..||.|+| ||..|..+|-.|+.. ++- .|. ..+.|+| .... +.-...| |.+-..+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~-~e~-~~l~L~d~d~~~~~~~~~G~amD-L~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVF-GQD-QPIALKLLGSERSFQALEGVAME-LEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTT-CTT-CCEEEEEECCGGGHHHHHHHHHH-HHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcC-CCC-ceeEEEecCccchhhhhHHHHHh-HHhhhhhhcCCcEEecCCH
Confidence 46999999 799999998888653 441 011 1266654 3210 0000011 3333334443222224678
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcC-CCCcEEEEcCCCC
Q 010044 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASF-NEKPLILALSNPT 449 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (519)
+++++ .|++|=+.+.+ |- +=+++++.++++ +..-||+-.|||.
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 88887 99887554433 31 123455667776 7889999999996
No 319
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=68.06 E-value=5.6 Score=37.38 Aligned_cols=86 Identities=10% Similarity=0.231 Sum_probs=54.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
||+|.|| |-.|..+++.|+ . | -+++.+|++.-.. .-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~--------------~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEF--------------CGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSS--------------CCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccc--------------cccCCCHHHHHHHHHhcC
Confidence 7899998 888888888775 3 4 3678887753111 011111235778888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 412 ptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988775431 14566777665443 5887544
No 320
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=68.01 E-value=6.2 Score=42.68 Aligned_cols=37 Identities=11% Similarity=0.273 Sum_probs=30.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+++.+|||+|||.||+..|-.|.+. |+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~-----G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL-----GH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC-----CC-------CEEEEcCCCC
Confidence 5678999999999999999888653 53 6899998843
No 321
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=67.88 E-value=3.9 Score=41.69 Aligned_cols=37 Identities=27% Similarity=0.461 Sum_probs=29.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
...+|+|+|||.||+..|..|.+. |.. .++.++|+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-----G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-----KAF-----DQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-----TCC-----SEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-----CCC-----CCeEEEecCC
Confidence 356899999999999999998753 531 3789999863
No 322
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=67.56 E-value=3.7 Score=41.65 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=29.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
...|||+|||.||+..|..|.+..... + .-++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCCC
Confidence 347999999999999999998752110 0 047889998753
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=67.45 E-value=13 Score=33.16 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 314 VLAGVVAALKLIGGTLAEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.++..+.+++....--.+++++|.| +|..|..+++++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 3444445554333334578999999 588888888877543 5 257877763
No 324
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=67.34 E-value=5 Score=39.81 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=25.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~ 32 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERL 32 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCC
Confidence 699999999999999998763 5 357777765
No 325
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=67.12 E-value=5.9 Score=37.40 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=57.8
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (519)
.+|+|.|| |-.|..+++.|++.- .| .+++++|+.. .. ..+.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 889999998887530 12 3688887641 11 10111 111211 21222457788886
Q ss_pred cCCcEEEeccCCCCC---------------CCHHHHHHHHcCCCCcEEEEc
Q 010044 410 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILAL 445 (519)
Q Consensus 410 vkptvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIFaL 445 (519)
.++|++|=+.+.... -|..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 679999988765321 133567777665556788743
No 326
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=67.02 E-value=4.7 Score=38.39 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=25.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
=-|+|+|||+||+..|..+.+. | .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~-----g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRA-----N-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEecC
Confidence 3579999999999999877653 5 368888864
No 327
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=66.92 E-value=5.9 Score=36.87 Aligned_cols=38 Identities=24% Similarity=0.237 Sum_probs=28.2
Q ss_pred CCCcccceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 326 g~~l~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
...+++.++||.||+ -.|.++|+.+++. | -+++++|++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~-----G-------~~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKRE-----G-------AELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT-----T-------CEEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHc-----C-------CCEEEEecc
Confidence 356889999999984 5677777777652 5 368888876
No 328
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=66.92 E-value=4.6 Score=41.73 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-----G-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988753 5 3689999754
No 329
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=66.79 E-value=5.4 Score=40.72 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 45799999999999999888764 5 3789999873
No 330
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=66.76 E-value=19 Score=31.94 Aligned_cols=91 Identities=11% Similarity=0.169 Sum_probs=54.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh--chhhcc-ccCCCCCHHHHhc
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 408 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~--k~~fa~-~~~~~~~L~eav~ 408 (519)
||+|.|| |-.|..+++.|++. | .++++++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-----G-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHhC-----C-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 88899998888753 5 3688887741 111111 111111 1111112 6776
Q ss_pred ccCCcEEEeccCCCCC-------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 409 VIKPTILIGSSGVGRT-------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 409 ~vkptvLIG~S~~~g~-------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
. +|++|=+.+.... .++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999987765421 2367888887765567777644
No 331
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=66.69 E-value=4.9 Score=42.84 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=29.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999975 253 589999874
No 332
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=66.61 E-value=12 Score=35.68 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=57.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (519)
.+|+|.|| |-.|..+++.|++. | -+++.+|+.- ....+.+.. +..+.. +..+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDE-----G-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 88888888888752 5 3678777631 110011211 111211 11222357777875
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
.++|++|=+.+.... -+..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345667776655567888544
No 333
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=66.54 E-value=4.9 Score=41.43 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF-----G-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-----C-------CcEEEEcCC
Confidence 46899999999999999998752 5 479999986
No 334
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=66.37 E-value=6.7 Score=37.27 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=54.9
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 010044 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (519)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (519)
..||+|.|| |-.|..+++.|++ .|. +++++++. ...| +. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 8888888888764 242 46665542 1111 21 11357777876
Q ss_pred cCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988775431 1345667776655567888544
No 335
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=66.35 E-value=7.1 Score=37.23 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=25.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 789999999999999998653 53 57888763
No 336
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=66.26 E-value=5.4 Score=39.36 Aligned_cols=138 Identities=14% Similarity=0.058 Sum_probs=70.3
Q ss_pred cchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 010044 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (519)
Q Consensus 308 QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (519)
++...-.++..+.|++..+ - ..++|+|.|||..|..++.++.. .|. ++++.+|+. ..| +.
T Consensus 147 ~aa~~~~~~ta~~~l~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~ 206 (348)
T 2d8a_A 147 YATLQEPLGNAVDTVLAGP-I-SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS----DFR---RE 206 (348)
T ss_dssp HHTTHHHHHHHHHHHTTSC-C-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HH
T ss_pred HHHhhhHHHHHHHHHHhcC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HH
Confidence 3433334444455664333 3 88999999999888888776643 253 468877763 111 11
Q ss_pred hhchhhccc--cCCCCCHHHHhcc----cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH-HHHh
Q 010044 388 HFKKPWAHE--HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTA-EEAY 460 (519)
Q Consensus 388 ~~k~~fa~~--~~~~~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tp-e~A~ 460 (519)
..++.=|.. .....++.+.++. -+.|++|=+++.+ ...++.++.|+. .=.|.-++.+....+..+ ...+
T Consensus 207 ~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~~l~~---~G~iv~~g~~~~~~~~~~~~~~~ 282 (348)
T 2d8a_A 207 LAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAP-KALEQGLQAVTP---AGRVSLLGLYPGKVTIDFNNLII 282 (348)
T ss_dssp HHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECCCCSSCCCCCHHHHTT
T ss_pred HHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCH-HHHHHHHHHHhc---CCEEEEEccCCCCcccCchHHHH
Confidence 111100110 0111356666653 2589998777632 233556666653 223444444443344444 4332
Q ss_pred cccCCcEEEEc
Q 010044 461 TWSKGRAIFAS 471 (519)
Q Consensus 461 ~wt~G~aifAs 471 (519)
.++.-+..+
T Consensus 283 --~~~~~i~g~ 291 (348)
T 2d8a_A 283 --FKALTIYGI 291 (348)
T ss_dssp --TTTCEEEEC
T ss_pred --hCCcEEEEe
Confidence 244455543
No 337
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=66.26 E-value=14 Score=35.33 Aligned_cols=97 Identities=20% Similarity=0.137 Sum_probs=54.9
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (519)
.||+|.|| |-.|..+++.|++. | .+++.+|++. ++.+.+...+..+.. +..+..++.+++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAA-----G-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 88999999888752 5 3688888742 111112211111221 11222357778875
Q ss_pred cCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+|++|=+.+..+. -+..+++++.+..-+.+||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 9999988765431 1346677776655567888543
No 338
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=66.18 E-value=4.6 Score=41.54 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=28.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
++.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~-----g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQL-----G-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 357899999999999999998652 5 3799999864
No 339
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=66.14 E-value=5.3 Score=37.23 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=55.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (519)
||+|.|| |-.|..+++.|++. ..| -+++.+|++. ++...+......+.. +..+..++.+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5888997 88888888877541 002 3688887641 111111111111111 11222457788876
Q ss_pred CCcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEEcC
Q 010044 411 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 411 kptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998776421 24678888887766567887543
No 340
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=66.13 E-value=5.3 Score=39.92 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=25.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|+|+|||.+|+..|-.|.+. | .++.++|+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 799999999999999998763 5 357777765
No 341
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=66.13 E-value=5.6 Score=41.70 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||.|+|+|..|..+|..+.+. | -+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 5899999999999999999763 5 367888874
No 342
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.85 E-value=4.3 Score=41.99 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=29.0
Q ss_pred ecCCcchhHHHHHHHHHHHHH---hCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 304 NDDIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 304 nDDiQGTaaV~LAgll~Alk~---~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
|...||-|+++.---+.--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+....
T Consensus 6 ~~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 6 HHHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 344567777665544432211 111122358999999999999999987631 12 478999987543
No 343
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=65.77 E-value=4.8 Score=41.59 Aligned_cols=35 Identities=29% Similarity=0.393 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-----G-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----S-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 357899999999999999998762 5 4699999863
No 344
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=65.44 E-value=5.5 Score=36.95 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-----g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-----G-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEecC
Confidence 45799999999999999988753 5 368888875
No 345
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=65.38 E-value=4.9 Score=42.87 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 253 789999864
No 346
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=65.38 E-value=4.7 Score=41.53 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~-----G-------~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR-----G-------RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEeCCCC
Confidence 46899999999999999888653 5 36889998654
No 347
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=65.28 E-value=4.5 Score=39.02 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=27.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
...+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 456899999999999999998753 53 57788853
No 348
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=65.25 E-value=3 Score=39.60 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=58.6
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCc--cCCchhchhhcc-ccCCCCCHHHH
Q 010044 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 406 (519)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~--~~l~~~k~~fa~-~~~~~~~L~ea 406 (519)
..+|+|.|| |-.|..+++.|++. | ..++..++++. ++. ..+......+.. +..+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 99999999888763 3 13677777641 110 001111111111 11222467888
Q ss_pred hcccCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEEcCC
Q 010044 407 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
+++ +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 886 8999987653211 3456778877655567888 664
No 349
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=65.18 E-value=5.4 Score=40.85 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-----G-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 45799999999999999888653 5 3689999873
No 350
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=65.15 E-value=7.3 Score=41.05 Aligned_cols=40 Identities=20% Similarity=0.251 Sum_probs=26.4
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 323 k~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+..++...-.||.|+|+|..|.++|..+.+ | -+++++|.+
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La~------G-------~~V~~~D~~ 67 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIAQ------N-------HEVVALDIV 67 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHHT------T-------SEEEEECSC
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHHc------C-------CeEEEEecC
Confidence 455666777899999999999999987653 4 357777764
No 351
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=64.88 E-value=7.6 Score=43.18 Aligned_cols=34 Identities=32% Similarity=0.323 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.=.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 346 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASK-----GT-------PILMKDIN 346 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cCCEEEEECCChhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 345899999999999999998764 64 57888864
No 352
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=64.74 E-value=5 Score=37.88 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=24.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|+|+|||.||+..|..+.+. |. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARK-----GI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCC
Confidence 4799999999999999988652 53 56677653
No 353
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=64.59 E-value=23 Score=34.96 Aligned_cols=99 Identities=18% Similarity=0.135 Sum_probs=57.9
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHh
Q 010044 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (519)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav 407 (519)
+..+|+|.|| |-.|..+++.|++. | -+++++|++- .....+...+..+.. +..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE-----G-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC-----C-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 88888888888652 5 3688888742 111111111111211 112223577778
Q ss_pred cccCCcEEEeccCCCCC--C---------------CHHHHHHHHcCCCCcEEEEcC
Q 010044 408 KVIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIFaLS 446 (519)
+ ++|++|=+.+.... + +..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 7 49999988775432 1 235666766655567888544
No 354
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=64.50 E-value=11 Score=37.27 Aligned_cols=49 Identities=22% Similarity=0.195 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
.++..+.|++..+. -..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44445566655443 346799999999888877765543 363 47888875
No 355
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=64.45 E-value=9.5 Score=37.52 Aligned_cols=96 Identities=24% Similarity=0.368 Sum_probs=52.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
+||-|+|-|..|.++|..|++. |. +++++|+. .++.+.+. +.-+ ....++.|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr~----~~~~~~l~---~~G~---~~~~s~~e~~~~-- 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNRT----ASKAEPLT---KLGA---TVVENAIDAITP-- 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC-----------CTTT---TTTC---EECSSGGGGCCT--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHHHHHHH---HcCC---eEeCCHHHHHhc--
Confidence 5899999999999999999864 64 57777752 33222221 1111 223577787775
Q ss_pred CcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH
Q 010044 412 PTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALSNPTSQSECTA 456 (519)
Q Consensus 412 ptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLSNPt~~~E~tp 456 (519)
.|++|=+-..+. ++..+++..+. +.-||.=+|+=. |+.+-
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~---~~~iiid~sT~~--p~~~~ 105 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLG---KDGVHVSMSTIS--PETSR 105 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHC---TTCEEEECSCCC--HHHHH
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcC---CCeEEEECCCCC--hHHHH
Confidence 777764322111 23333444443 445777777533 44443
No 356
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=64.45 E-value=4.6 Score=41.72 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
.+|||+|||.||+..|-.|.+... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999999987431 14 36888988643
No 357
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=64.43 E-value=7.9 Score=41.17 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=22.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
++++.+++|.|||.+|.++|..+.+. |. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999997777777776553 52 58888774
No 358
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=64.42 E-value=5.4 Score=40.62 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999888763 64 67888865
No 359
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=64.29 E-value=10 Score=34.87 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=58.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea 406 (519)
..-.+|+|.|| |-.|..+++.|++ .|- -++++++++. ++...+......+.. +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 7888888887764 241 3677777642 111111111111111 22222467788
Q ss_pred hcccCCcEEEeccCCCCC--CCHHHHHHHHcCCCCcEEEEcC
Q 010044 407 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966554322 2567889998766667888555
No 360
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=64.19 E-value=5.3 Score=40.90 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-----G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-----G-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCC
Confidence 45799999999999999888653 5 368999986
No 361
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=64.04 E-value=5.7 Score=40.51 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
-+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----G-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 4799999999999999888653 5 3789999873
No 362
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=64.03 E-value=5.3 Score=41.93 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999998763 5 3689999875
No 363
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=64.02 E-value=21 Score=36.32 Aligned_cols=137 Identities=5% Similarity=0.005 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceee--cCCcchhHHHHHHHHHHHHHhC------CCcccce
Q 010044 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHR 333 (519)
Q Consensus 262 idefv~av~~~fGp~~lIqfEDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g------~~l~d~r 333 (519)
+...+..+ .+| .++ |-+-.++ +.+.+.+.+|- ++||.| || +-=-+=+||=++.-.+..| +++++.|
T Consensus 90 l~DTarvl-s~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~ 163 (328)
T 3grf_A 90 VQDTAEVF-SRM-VDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK 163 (328)
T ss_dssp HHHHHHHH-TTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred HHHHHHHH-Hhh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcE
Confidence 33444433 346 443 4455554 34555666664 689998 55 4444566777777767666 3799999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc---c---CCCCCHHHHh
Q 010044 334 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAV 407 (519)
Q Consensus 334 iv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~---~---~~~~~L~eav 407 (519)
|+++|-+. + .+|+-++.++.+ .|+ ++.++-.+|+..+-. +.+...-+.++.. . ....++.|||
T Consensus 164 va~vGD~~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav 232 (328)
T 3grf_A 164 FAYCGDSM-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGC 232 (328)
T ss_dssp EEEESCCS-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHH
T ss_pred EEEeCCCC-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHh
Confidence 99999985 2 478888777766 364 688898888853111 1122222233322 1 1236899999
Q ss_pred cccCCcEEEe
Q 010044 408 KVIKPTILIG 417 (519)
Q Consensus 408 ~~vkptvLIG 417 (519)
++ +||+.-
T Consensus 233 ~~--aDvvyt 240 (328)
T 3grf_A 233 EG--VDVVYT 240 (328)
T ss_dssp TT--CSEEEE
T ss_pred cC--CCEEEe
Confidence 98 999974
No 364
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=64.00 E-value=5.8 Score=41.93 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
..+|||+|||.||...|..|.+... .| -+|.|+|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999999977420 14 37899998643
No 365
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=64.00 E-value=6.6 Score=39.89 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=20.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 010044 331 EHRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~ 353 (519)
+.-|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999998764
No 366
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=63.97 E-value=16 Score=34.71 Aligned_cols=78 Identities=14% Similarity=0.205 Sum_probs=42.5
Q ss_pred CCCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHH
Q 010044 326 GGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (519)
Q Consensus 326 g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ 404 (519)
..+++++++||-||+. .|.++|+.+++ .|. +++++|++.- .+......+.-+..+..++.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~-----~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~ 69 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVR-----YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVK 69 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHH
Confidence 4578899999999854 44455555543 363 6888886421 11111111211222223455
Q ss_pred HHhccc-----CCcEEEeccCCC
Q 010044 405 DAVKVI-----KPTILIGSSGVG 422 (519)
Q Consensus 405 eav~~v-----kptvLIG~S~~~ 422 (519)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 70 EAVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 555544 799999776643
No 367
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=63.78 E-value=11 Score=37.03 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=58.7
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhcc-ccCCCCCHH
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~-~~~~~~~L~ 404 (519)
+++..+|+|.|| |-.|..+++.|++. | ..+++.+|+..- .....+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLEL-----G------VNQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT-----T------CSEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHc-----C------CceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 466779999997 88898888888752 4 136888876421 1001121 01111111 111113466
Q ss_pred HHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcC-CCCcEEEEcC
Q 010044 405 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 446 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIFaLS 446 (519)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 59999988775421 144566777655 4467887544
No 368
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=63.78 E-value=5.9 Score=41.54 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=27.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+.+|+|+|||.+|+..|-.|.+. |+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG-----GV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 567899999999999999998763 64 46677764
No 369
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=63.75 E-value=3.2 Score=43.73 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.||||+|+|.||+..|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999999887632 12 369999986
No 370
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=63.71 E-value=13 Score=35.32 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=55.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (519)
||+|.|| |-.|..+++.|++ .| -+++++|+.- ......+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6889987 8888888887764 25 3577777621 111111110 111111 111123577778766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0235666766655567888544
No 371
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=63.70 E-value=6.9 Score=40.87 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=28.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
.+|||+|||.||+..|..|.+. |- .-+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999998764 21 2478899887543
No 372
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=63.62 E-value=5.5 Score=46.40 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=34.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
++|++.||+|+|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999986 75 799999986
No 373
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=63.62 E-value=6.9 Score=40.80 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
...+|||+|||.||+..|..|.+. +. ..+|.|+|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988664 21 247999998753
No 374
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=63.57 E-value=5.8 Score=41.57 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|||+|||.||+..|-.|.+... .| -++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999999876310 24 3688999854
No 375
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=63.57 E-value=7.7 Score=39.48 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
..+|||+|||.||+..|..|.+. +- ..++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999998764 21 136888887653
No 376
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=63.55 E-value=5.7 Score=41.89 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=28.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|||+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 456899999999999999998763 64 688898864
No 377
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=63.36 E-value=6.2 Score=40.12 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|||+|||.||+..|..|.+.+.. | -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999999774311 2 3677887754
No 378
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=63.28 E-value=12 Score=36.91 Aligned_cols=86 Identities=19% Similarity=0.088 Sum_probs=54.9
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 010044 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (519)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (519)
+.||+++|+ |..|.-+++.+.+. |. +-++.+|.+.. +. + .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 579999999 99888777766542 53 35667776411 00 0 01 11123679998875
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 010044 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (519)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (519)
.++|+.|=++ .+ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~viI~t-P~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVIYV-PA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEECC-CG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEec-CH-HHHHHHHHHHHHCCCCEEE
Confidence 5699888443 23 6888999988876655533
No 379
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=63.26 E-value=4.9 Score=37.89 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=24.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.|+|+|||+||+..|..+.+. |+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~-----g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRS-----SL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 599999999999999777552 53 57788864
No 380
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=63.23 E-value=3.9 Score=39.66 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|+|+|||.+|+.+|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999999886510 024 368888875
No 381
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=63.16 E-value=6 Score=40.62 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 45799999999999999988753 5 3789999874
No 382
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=63.16 E-value=5 Score=41.11 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999998865 24 479999986
No 383
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=62.95 E-value=5.9 Score=40.09 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|||+|||.||+..|..|.+. . .| -++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999998762 0 12 3788888764
No 384
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=62.83 E-value=36 Score=34.95 Aligned_cols=127 Identities=19% Similarity=0.237 Sum_probs=79.2
Q ss_pred hcCCCeeeeeecCCCccHHHHHHHHcCCCceee--cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHH
Q 010044 272 NYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAEL 349 (519)
Q Consensus 272 ~fGp~~lIqfEDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~l 349 (519)
+| .++++ +--++ +.+.+.+.+|- ++||.| || .-=-+=+||=++.-.+..| +|++.||+++|-+. .+|+-
T Consensus 124 ~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~---nva~S 194 (340)
T 4ep1_A 124 HY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDGN---NVCHS 194 (340)
T ss_dssp HH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCC---HHHHH
T ss_pred Hh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCc---hhHHH
Confidence 45 44433 45443 34555666664 689998 44 2334456777766666655 59999999999982 37888
Q ss_pred HHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-c---CCCCCHHHHhcccCCcEEEeccC
Q 010044 350 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H---EPVNNLLDAVKVIKPTILIGSSG 420 (519)
Q Consensus 350 l~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~---~~~~~L~eav~~vkptvLIG~S~ 420 (519)
++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+. . ....++.|||++ +||+.-..=
T Consensus 195 l~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w 256 (340)
T 4ep1_A 195 LLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVW 256 (340)
T ss_dssp HHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC
T ss_pred HHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCc
Confidence 8777766 364 68888887774321 111112223332 1 123689999998 999987653
No 385
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=62.73 E-value=8.1 Score=40.29 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHhhcCCChhhhcCcEEEEe
Q 010044 331 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVD 373 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~-~~~~~~G~~~eeA~~~i~lvD 373 (519)
+.+|+|+|||.||+..|..+.+ . | .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~-----G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY-----G-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-----C-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhc-----C-------CeEEEEe
Confidence 4689999999999999999976 3 5 4789999
No 386
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=62.68 E-value=5.7 Score=38.36 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=60.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhc----------hhhcc-c
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 396 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k----------~~fa~-~ 396 (519)
+...+|+|.|| |-.|..+++.|++. | .+++.+|+..- .....+...+ ..+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL-----N-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45789999996 88999999888752 5 36888887421 1101111111 11111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 397 ~~~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 112235777887 59999988875321 1334788887776678998633
No 387
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=62.64 E-value=6.8 Score=39.97 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
..+|||+|||.||+..|..+.+. |. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-----GW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-----Cc-----CCCEEEEECCCC
Confidence 46899999999999999998753 54 137899987643
No 388
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=62.58 E-value=7.2 Score=42.56 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999999764 5 3689999863
No 389
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=62.58 E-value=6.8 Score=40.60 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=29.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|||+|||.||+..|..+.+... ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~---------~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYG---------DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHG---------GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCC---------CCCeEEEEECCC
Confidence 4789999999999999999976420 025789999864
No 390
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.54 E-value=5.4 Score=40.73 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQL-----G-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 4799999999999999888653 5 378999986
No 391
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=62.49 E-value=9.3 Score=37.77 Aligned_cols=58 Identities=21% Similarity=0.127 Sum_probs=37.5
Q ss_pred cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 305 DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
++.++.....++..+.|++..+. -..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGV-RLGDPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44445444455556667765543 346789999999888877655543 364 56888876
No 392
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=62.48 E-value=4 Score=40.83 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=54.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (519)
+....||.|+|+|..|...++.+... ..|. +-+.++|++ .+ ......+.|-.......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~---~~~~------~lvav~d~~----~~---~~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANT---VSGV------EVVAVCDIV----AG---RAQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT---CTTE------EEEEEECSS----TT---HHHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhh---CCCc------EEEEEEeCC----HH---HHHHHHHHhCCCCeeeCCHHHHh
Confidence 34457999999999887766655421 1121 224467763 11 12222333321112247899999
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 010044 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (519)
+.-++|+++ +++.. .+..++++...+. .++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 987899988 55544 4666666655443 356654
No 393
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=62.43 E-value=4.2 Score=41.78 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999988752 3 358888874
No 394
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=62.33 E-value=5.5 Score=39.58 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|||+|||.||+..|..+.+. |. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKL-----DG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-----CS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhh-----CC-----CCCEEEEECC
Confidence 36799999999999999988653 53 1357778764
No 395
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=62.14 E-value=20 Score=34.86 Aligned_cols=56 Identities=18% Similarity=0.189 Sum_probs=33.6
Q ss_pred CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 307 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 307 iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
.++...-.++..+.+.+..+ .-.+++++|.|||..|...+.++.. .|. +.++.+|+
T Consensus 138 ~~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~ak~-----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 138 EDGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCAVA-----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHHHH-----cCC------cEEEEEec
Confidence 34444333444444444443 3467899999999988766644433 363 56777765
No 396
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=62.11 E-value=6.4 Score=37.56 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=24.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.--++|+|||+||+..|-.+.+ .| .++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 3458999999999998865543 25 468888874
No 397
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=62.05 E-value=6.1 Score=41.43 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=27.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-++..|+|+|||.+|+..|-.|.+. |+ ++.++|++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 43 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLA-----GV-------EVVVLERL 43 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 4567899999999999999998763 64 46666654
No 398
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=61.99 E-value=6.8 Score=41.02 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
..+|+|+|||.||+..|..+.+. |+ ++.++|+..-+
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~-----G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALL-----GA-------RVVLVEKRIKF 127 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCSSC
T ss_pred CCCEEEECccHHHHHHHHHHHHC-----CC-------eEEEEEecccc
Confidence 56899999999999999988753 63 68889876443
No 399
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=61.85 E-value=5.8 Score=38.16 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.8
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|++.++||+|+|..|..-+++|+++ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 47889999999999999999988764 4 368888864
No 400
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=61.81 E-value=5.3 Score=42.54 Aligned_cols=36 Identities=17% Similarity=0.102 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|||+|||.||+..|..|.+. .|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~----~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE----LGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc----CCC-------CEEEEECCC
Confidence 356899999999999999988721 353 688999864
No 401
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=61.71 E-value=8.5 Score=36.06 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=24.4
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|++.+++|.|| |-.|..+|+.+++ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVA-----AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 467889999997 4455566666654 25 368888774
No 402
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=61.70 E-value=14 Score=33.25 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=56.8
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCC-CCCHHHHhcc
Q 010044 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 409 (519)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~-~~~L~eav~~ 409 (519)
||+|.| +|-.|..+++.|++ .| -++++++++.- +...+ .+..+.. +..+ ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 789999 57777777777754 25 36888887521 11111 1111211 2222 2356777775
Q ss_pred cCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987765421 1567888888766677888554
No 403
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.59 E-value=6.1 Score=41.14 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999998762 5 4699999863
No 404
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=61.55 E-value=6.4 Score=41.01 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.-.|+|+|||.+|+++|..+.+. |+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~-----G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR-----GL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEECCC
Confidence 45799999999999999988763 64 588999864
No 405
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=61.55 E-value=8.6 Score=40.68 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=30.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
...+|||+|||.||+..|..|.+.. .| -+|.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLS---EE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhC---cC-------CCEEEEECCCCc
Confidence 3579999999999999999987641 12 478899987643
No 406
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=61.52 E-value=8.1 Score=36.64 Aligned_cols=77 Identities=12% Similarity=0.121 Sum_probs=43.3
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-------cccC
Q 010044 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (519)
Q Consensus 327 ~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-------~~~~ 398 (519)
.+|+++++||-||+ -.|.++|+.+++ .| -+++++|++- +.+....+.+. -+..
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLAR-----AG-------ARVVLADLPE-------TDLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT-------SCHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCCeEEEECCCC
Confidence 36788999999974 345556666554 36 3688888741 12322222211 0111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCC
Q 010044 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (519)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (519)
+..++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 123455555544 799999777654
No 407
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.49 E-value=6.2 Score=40.50 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999888653 4 379999983
No 408
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=61.39 E-value=5.6 Score=41.06 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=25.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
||.|+|+|..|..+|..+.+. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999998763 5 258888874
No 409
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=61.25 E-value=11 Score=34.30 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=40.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc-
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v- 410 (519)
+++|.|| |-.|..+++.|++ .| -+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6888887 6777777777765 25 3688888741 1 1211 1111111113466666654
Q ss_pred -CCcEEEeccCCC
Q 010044 411 -KPTILIGSSGVG 422 (519)
Q Consensus 411 -kptvLIG~S~~~ 422 (519)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887654
No 410
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=61.12 E-value=6.9 Score=40.11 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-----G-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 45799999999999999998753 5 3799999854
No 411
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=61.11 E-value=20 Score=33.29 Aligned_cols=77 Identities=13% Similarity=0.198 Sum_probs=41.8
Q ss_pred CCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHH
Q 010044 326 GGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (519)
Q Consensus 326 g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ 404 (519)
..++++.+++|.||+ -.|..+|+.|++ .| -+++++|++- ++ +.... .+.-+..+..++.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAA-----DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 346788899999974 344455555543 25 3688888741 11 21111 1111212223455
Q ss_pred HHhccc-----CCcEEEeccCCC
Q 010044 405 DAVKVI-----KPTILIGSSGVG 422 (519)
Q Consensus 405 eav~~v-----kptvLIG~S~~~ 422 (519)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555543 689999877654
No 412
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=61.09 E-value=7 Score=38.69 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=18.8
Q ss_pred eEEEeCcchHHHHHHHHHHHH
Q 010044 333 RFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~ 353 (519)
+|+|+|||.||+..|-.|.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~ 22 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA 22 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhc
Confidence 699999999999999988763
No 413
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=60.98 E-value=6.7 Score=38.03 Aligned_cols=37 Identities=30% Similarity=0.593 Sum_probs=28.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+.-|+|+|||+||+..|..|.+. +.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3466799999999999999988653 1253 67888875
No 414
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=60.82 E-value=7.2 Score=40.06 Aligned_cols=35 Identities=31% Similarity=0.358 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+..|+|+|||.||+..|..+.+. | .++.++|++.-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-----G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-----K-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCCC
Confidence 35799999999999999988653 5 37899996553
No 415
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=60.78 E-value=7.7 Score=36.22 Aligned_cols=35 Identities=31% Similarity=0.379 Sum_probs=23.7
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
|+++++||.|| |-.|..+|+.|++ .|. +++++|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLAR-----AGA-------NIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 56788999998 4456666666654 253 58888764
No 416
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=60.73 E-value=7.5 Score=39.66 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
.+|||+|||.||+..|..|.+.. .| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999997641 12 47888887643
No 417
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=60.70 E-value=7.7 Score=40.07 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+..|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----G-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----c-------CEEEEEeCC
Confidence 46899999999999999988763 5 368899984
No 418
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=60.62 E-value=9.4 Score=38.71 Aligned_cols=91 Identities=8% Similarity=0.087 Sum_probs=52.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc-
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v- 410 (519)
.||.|+|+|..|..+|..|... | .+++++|++- +.+...++. ......++.++++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~~a~~~---G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAKSAVDE---GFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHHHHHHT---TCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHHHHHHc---CCeeeCCHHHHHHhcc
Confidence 5899999999999999998763 5 3688888641 111111100 001124677766542
Q ss_pred -CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 010044 411 -KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 411 -kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
.+|++| ++.+. .-++++++.++.+.+.-||.=++
T Consensus 67 ~~aDlVi-lavP~-~~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 67 AEDALIV-LAVPM-TAIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HTTCEEE-ECSCH-HHHHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCEEE-EeCCH-HHHHHHHHHHHccCCCCEEEEcC
Confidence 367766 44433 24567777766554444554443
No 419
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=60.59 E-value=7.6 Score=38.95 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..|||+|||.+|+.+|-.|.+.. -| .++.++|+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCC
Confidence 58999999999999999987630 04 368889875
No 420
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=60.46 E-value=6.1 Score=41.21 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+..|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988865 364 578888764
No 421
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=60.42 E-value=7.3 Score=40.41 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHH
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~ 353 (519)
....+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999999764
No 422
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=60.18 E-value=8.4 Score=37.35 Aligned_cols=37 Identities=24% Similarity=0.243 Sum_probs=26.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.|+|+|||.+|+.+|-.|.+. |.+. --..++.++|+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~-~p~~~V~vlE~~ 38 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV-LQPLDIKVYADR 38 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT-SSSCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc-CCCceEEEEECC
Confidence 689999999999999888764 3100 001478999987
No 423
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=60.08 E-value=8.2 Score=39.55 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+-.|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35699999999999999998764 5 468899986
No 424
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=59.81 E-value=18 Score=35.68 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=36.4
Q ss_pred chhHHHHHHHHHHHHHhCCCccc--ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 309 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d--~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
++-...++..+.|+...++--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455556666333333356 89999998 9889888877654 353 478888873
No 425
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=59.80 E-value=5.7 Score=41.41 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=28.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 35689999999999999988864 364 688888874
No 426
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=59.77 E-value=7.6 Score=39.57 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999997641 13 4789999865
No 427
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=59.77 E-value=7.6 Score=40.18 Aligned_cols=35 Identities=14% Similarity=0.341 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G-------~~V~vlE~~~~ 38 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----G-------LNVVVLEARDR 38 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCCC
Confidence 45799999999999999999763 5 35777776543
No 428
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=59.71 E-value=6.1 Score=36.95 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=23.7
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|+++++||.||+ -.|..+|+.+++ .|. +++++|++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLG-----EGA-------KVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 5778899999974 445555555543 252 58888764
No 429
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=59.57 E-value=7.7 Score=39.44 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999997641 12 47999998653
No 430
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=59.56 E-value=7.1 Score=40.87 Aligned_cols=39 Identities=31% Similarity=0.397 Sum_probs=29.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHh-------hcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISK-------QTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~-------~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|||+|||.||...|-.|.+.... ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999999874310 0243 688898764
No 431
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=59.36 E-value=8.7 Score=38.21 Aligned_cols=95 Identities=18% Similarity=0.139 Sum_probs=50.5
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc--
Q 010044 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 396 (519)
Q Consensus 319 l~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-- 396 (519)
+.|+.....--.+++|+|.|+|..|...+.++.. .|. +++.+|+. ..| +...++.-|..
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~lGa~~vi 238 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSSS----REK---LDRAFALGADHGI 238 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEESC----HHH---HHHHHHHTCSEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEecC----chh---HHHHHHcCCCEEE
Confidence 3344223333457899999999888877766543 362 57777752 111 11111111110
Q ss_pred cCCCCCHHHHhcc----cCCcEEEeccCCCCCCCHHHHHHHH
Q 010044 397 HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAMA 434 (519)
Q Consensus 397 ~~~~~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~Ma 434 (519)
.....++.+.++. .++|++|=+++ + ..-++.++.|+
T Consensus 239 ~~~~~~~~~~v~~~~~g~g~D~vid~~g-~-~~~~~~~~~l~ 278 (363)
T 3uog_A 239 NRLEEDWVERVYALTGDRGADHILEIAG-G-AGLGQSLKAVA 278 (363)
T ss_dssp ETTTSCHHHHHHHHHTTCCEEEEEEETT-S-SCHHHHHHHEE
T ss_pred cCCcccHHHHHHHHhCCCCceEEEECCC-h-HHHHHHHHHhh
Confidence 1112355555543 36888888776 3 34455666665
No 432
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=58.97 E-value=20 Score=34.89 Aligned_cols=108 Identities=23% Similarity=0.230 Sum_probs=57.5
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc---ccCCccCCchh------chhhcc-
Q 010044 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHF------KKPWAH- 395 (519)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi---~~~R~~~l~~~------k~~fa~- 395 (519)
.+++..+|+|.|| |-.|..+++.|++.- .| -+++++|+..-- ...+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~---~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENH---PK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHC---TT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhC---CC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 888888888887520 14 478888874320 00000011111 111111
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+..+..++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 23479999977764321 123566776665555 888655
No 433
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=58.96 E-value=11 Score=36.58 Aligned_cols=101 Identities=13% Similarity=0.190 Sum_probs=58.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhch----------hhcc-c
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~----------~fa~-~ 396 (519)
++..+|+|.|| |-.|..+++.|++. | .+++.+|+.-- ...+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL-----D-------QKVVGLDNFAT---GHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCSS---CCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCCc---cchhhHHHHhhhcccccCCceEEEECC
Confidence 55678999998 88898888888752 5 36888887421 11011211111 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 397 ~~~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
..+..++.++++ ++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111235777787 59999988875431 1345666666655566887543
No 434
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=58.94 E-value=9.6 Score=36.49 Aligned_cols=97 Identities=12% Similarity=0.092 Sum_probs=59.3
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchh----------hcc-ccC
Q 010044 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----------WAH-EHE 398 (519)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~----------fa~-~~~ 398 (519)
..+|+|.|| |-.|..+++.|++. | -+++++|+.. .+ .....+. +.. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH-----G-------YDVVIADNLV----NS---KREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCS----SS---CTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC-----C-------CcEEEEecCC----cc---hHHHHHHHHhhcCCCceEEEeecC
Confidence 468999985 77888888887652 5 3688887641 11 1111111 111 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 399 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 399 ~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+..++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22357788886689999987765421 1345778887776678998544
No 435
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=58.91 E-value=25 Score=34.89 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=25.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+++|+|.|||..|..++.++... | | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----G-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----T-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC
Confidence 89999999998888887776542 5 2 68888864
No 436
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=58.73 E-value=7.2 Score=40.45 Aligned_cols=36 Identities=28% Similarity=0.477 Sum_probs=28.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999987630 003 3799999874
No 437
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=58.64 E-value=8.6 Score=39.47 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=28.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
-...+|+|+|||.||+..|..|.+. | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999998763 5 368888876
No 438
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=58.63 E-value=9 Score=35.92 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=54.9
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (519)
+-...||+|.|| |-.|..+++.|++ .| -+++.+|++ ..| +. +..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~-----------d~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-IT-----------NVLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TT-----------CHHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CC-----------CHHHHHHH
Confidence 345678888887 8888888887764 24 367878774 111 21 11357777
Q ss_pred hcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 407 VKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 407 v~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 776679999988775421 03456777665444 7888554
No 439
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=58.51 E-value=8.4 Score=39.76 Aligned_cols=34 Identities=29% Similarity=0.322 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE-----G-------LKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 45899999999999999887652 5 3699999853
No 440
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=58.46 E-value=7 Score=39.81 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=19.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 010044 332 HRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~ 353 (519)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999888764
No 441
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=58.43 E-value=6.6 Score=40.03 Aligned_cols=35 Identities=26% Similarity=0.260 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
+.+|+|+|||.||+..|..+.+. | .++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-----G-------~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-----G-------KSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-----C-------CCEEEEeCCCC
Confidence 45799999999999999888653 5 36889998653
No 442
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=58.35 E-value=11 Score=33.97 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=57.1
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHh
Q 010044 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (519)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav 407 (519)
...+|+|.|| |-.|..+++.|++. |- .-++++++++. ++.+.+. .+..+.. +..+..++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~-----~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEG-----SD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-----TT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhc-----CC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHHH
Confidence 4578999995 88888888888652 20 14688887742 1100010 0111111 112224577778
Q ss_pred cccCCcEEEeccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEEcC
Q 010044 408 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 408 ~~vkptvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIFaLS 446 (519)
+. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 75 8999977664311 1 357788887665567888543
No 443
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=57.95 E-value=8.7 Score=39.23 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=19.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 010044 332 HRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~ 353 (519)
.+|+|+|||.||+..|..|.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~ 61 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA 61 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 5899999999999999998763
No 444
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=57.83 E-value=8.4 Score=38.67 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
.+.+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 356899999999999999988763 53 577777753
No 445
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=57.81 E-value=24 Score=34.39 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
...+.+++..+. -..++++|+|||+.|...+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 344567776654 3578999999999987666555433 23 47888876
No 446
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=57.78 E-value=8 Score=38.61 Aligned_cols=22 Identities=23% Similarity=0.395 Sum_probs=20.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 010044 332 HRFLFLGAGEAGTGIAELIALE 353 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~ 353 (519)
.+|+|+|||.+|+..|..|.+.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~ 27 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKE 27 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHh
Confidence 5899999999999999999876
No 447
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=57.67 E-value=6.1 Score=38.17 Aligned_cols=34 Identities=21% Similarity=0.492 Sum_probs=27.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
....|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 3568999999999999998885 1 5 3688999874
No 448
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=57.58 E-value=6.4 Score=41.26 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHH
Q 010044 333 RFLFLGAGEAGTGIAELIALEI 354 (519)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~ 354 (519)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887754
No 449
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=57.53 E-value=8.9 Score=36.71 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=28.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
.+..|||+|||.||+..|..+.+. .| .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CC-------CeEEEEECCCC
Confidence 356899999999999999888641 14 36888988643
No 450
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=57.50 E-value=6.7 Score=36.70 Aligned_cols=84 Identities=23% Similarity=0.344 Sum_probs=54.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (519)
.||+|.|| |-.|..+++.|++. | -+++.+|+. ..| +. +..++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~------~~D-~~-----------d~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE-----E-------YDIYPFDKK------LLD-IT-----------NISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT-----T-------EEEEEECTT------TSC-TT-----------CHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----C-------CEEEEeccc------ccC-CC-----------CHHHHHHHHHhc
Confidence 38999996 88888888877542 4 368888871 111 21 113577888877
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
++|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 89999987765431 03457777766554 4887544
No 451
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=57.40 E-value=7.9 Score=39.60 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (519)
..|+|+|||.||+..|-.+.+. | .++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEE-----G-------ANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----C-------CCEEEEECCCC
Confidence 5799999999999999888652 5 36899998653
No 452
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=57.17 E-value=7.9 Score=39.74 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=28.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----G-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEecC
Confidence 356899999999999999988763 5 368899965
No 453
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=57.17 E-value=12 Score=37.78 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|+|+|||.+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999999774 41 14688888753
No 454
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=57.16 E-value=8.9 Score=38.66 Aligned_cols=34 Identities=24% Similarity=0.504 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|+|+|||.+|+..|..|.+. | .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEecC
Confidence 46899999999999999988652 4 4677777653
No 455
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=57.12 E-value=7.8 Score=40.98 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+..|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~-----G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHR-----QV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 46899999999999999988763 64 577888753
No 456
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=57.07 E-value=7.7 Score=36.11 Aligned_cols=77 Identities=25% Similarity=0.344 Sum_probs=44.2
Q ss_pred CCcccceEEEeCcch-HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-------cccC
Q 010044 327 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (519)
Q Consensus 327 ~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-------~~~~ 398 (519)
.++++.++||.||+. .|..+|+.+++ .| -+++++|++- +.+...++.+. -+..
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999864 46666666654 25 3688888741 11222222111 1111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCC
Q 010044 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (519)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (519)
+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223455666655 799999777653
No 457
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=57.04 E-value=24 Score=32.85 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=24.1
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+++++++||-||+ -.|.++|+.+++ .|. +++++|++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQ-----EGA-------TVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 5778899999974 345555555544 363 68888874
No 458
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=56.86 E-value=8 Score=39.03 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.+|+|+|||.||+..|..|.+. |.+ .++.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-----G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-----PCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-----SSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCC-----CcEEEEeCC
Confidence 5899999999999999998753 531 167777764
No 459
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=56.86 E-value=23 Score=32.41 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=24.7
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 327 ~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..++++++||.||+ -.|.++|+.+++ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAA-----HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHH-----CC-------CEEEEEecC
Confidence 35788999999984 345555555543 35 368888875
No 460
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=56.76 E-value=6.1 Score=36.91 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=55.9
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (519)
+|+|.|| |-.|..+++.|++. ..| -+++.++++. .+...+......+.. +-.+..++.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 88888888887642 002 3678887741 111111111111211 11222457788875
Q ss_pred CCcEEEeccCCCC------CCCHHHHHHHHcCCCCcEEEEcC
Q 010044 411 KPTILIGSSGVGR------TFTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 411 kptvLIG~S~~~g------~Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+|++|=+++..- .-+..+++++.+..-+.|||.=|
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998876421 02346777777665567887543
No 461
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.60 E-value=6.2 Score=39.45 Aligned_cols=35 Identities=14% Similarity=0.383 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
..++||+|||.||+..|..+.+. | ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-----g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-----Y--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-----S--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-----C--------CEEEEECCCCC
Confidence 45899999999999999988431 2 78999986543
No 462
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=56.54 E-value=14 Score=35.57 Aligned_cols=80 Identities=11% Similarity=0.177 Sum_probs=45.4
Q ss_pred CCcccceEEEeCcc---hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchh-----hcc-cc
Q 010044 327 GTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-----WAH-EH 397 (519)
Q Consensus 327 ~~l~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~-----fa~-~~ 397 (519)
.+|+++++||.||+ -.|.+||+.+++. |. +++++|++. ...+.+....+. +.. +.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~-----G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv 89 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQ-----GA-------EVALTYLSE----TFKKRVDPLAESLGVKLTVPCDV 89 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHT-----TC-------EEEEEESSG----GGHHHHHHHHHHHTCCEEEECCT
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHC-----CC-------EEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcCC
Confidence 45788999999996 4566688877653 63 588888752 110111111111 111 11
Q ss_pred CCCCCHHHHhccc-----CCcEEEeccCCC
Q 010044 398 EPVNNLLDAVKVI-----KPTILIGSSGVG 422 (519)
Q Consensus 398 ~~~~~L~eav~~v-----kptvLIG~S~~~ 422 (519)
.+..++.++++.+ +.|+||=..+..
T Consensus 90 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 90 SDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 1223455556554 799999777654
No 463
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=56.49 E-value=4.8 Score=41.04 Aligned_cols=34 Identities=38% Similarity=0.446 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|++-
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3579999999999999988864 354 577777654
No 464
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=56.36 E-value=8.9 Score=37.78 Aligned_cols=102 Identities=19% Similarity=0.207 Sum_probs=60.8
Q ss_pred CCCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchh-------hcc-c
Q 010044 326 GGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAH-E 396 (519)
Q Consensus 326 g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~-------fa~-~ 396 (519)
...+++.+|+|.|| |..|..+++.|++. .|. ++++++|++-- .+...++. +.. +
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~D 78 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGD 78 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECC
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECC
Confidence 34577889999996 89999999988753 142 47888877411 11111111 111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----C------------CHHHHHHHHcCCCCcEEEEcC
Q 010044 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----F------------TKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 397 ~~~~~~L~eav~~vkptvLIG~S~~~g~----F------------t~evv~~Ma~~~erPIIFaLS 446 (519)
..+..++.++++. +|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 79 l~d~~~l~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 79 VRDLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TTCHHHHHHHTTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCHHHHHHHHhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 1122356777774 9999988876531 0 234666666655567888544
No 465
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=56.28 E-value=12 Score=38.92 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=26.5
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHhhcCCChhhhcCcEEEEe
Q 010044 331 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVD 373 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~-~~~~~~G~~~eeA~~~i~lvD 373 (519)
+.+|+|+|||.||+..|..+.+ . | .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~-----G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH-----K-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH-----C-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHc-----C-------CEEEEEe
Confidence 4589999999999999999976 3 5 3699999
No 466
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=55.84 E-value=19 Score=33.50 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=26.7
Q ss_pred CCcccceEEEeCcc-h--HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 327 GTLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 327 ~~l~d~riv~~GAG-s--Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
.++++.++||.||+ . .|.++|+.+++ .|. +++++|+.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~ 42 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAG 42 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCc
Confidence 35788999999985 3 56667777765 263 58888875
No 467
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=55.66 E-value=1.8 Score=41.61 Aligned_cols=21 Identities=19% Similarity=0.164 Sum_probs=17.1
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 010044 332 HRFLFLGAGEAGTGIAELIAL 352 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~ 352 (519)
.||.|+|+|..|.++|+.+..
T Consensus 3 m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-
T ss_pred ceEEEEeCCHHHHHHHHHHHH
Confidence 379999999999999887754
No 468
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=55.48 E-value=17 Score=35.85 Aligned_cols=54 Identities=20% Similarity=0.096 Sum_probs=33.5
Q ss_pred cchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 308 QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
++.....++..+.|++..+. -..++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 147 ~aa~~~~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 147 EGALLEPLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKA-----YGA-------FVVCTAR 200 (352)
T ss_dssp HHHTHHHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHhhchHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEcC
Confidence 44333344445566655443 356899999999888777765543 363 3887775
No 469
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=55.46 E-value=35 Score=32.05 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=53.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 010044 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (519)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (519)
||+|.|| |-.|..+++.|++. | -+++.+|+..- ...... .....+.. +..+.. +.++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~~- 63 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVEL-----G-------YEVVVVDNLSS---GRREFV-NPSAELHVRDLKDYS-WGAGIKG- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCSS---CCGGGS-CTTSEEECCCTTSTT-TTTTCCC-
T ss_pred EEEEECCCChHHHHHHHHHHhC-----C-------CEEEEEeCCCC---Cchhhc-CCCceEEECccccHH-HHhhcCC-
Confidence 7899998 88999999888763 5 36788876421 111101 11111111 212222 5555553
Q ss_pred CCcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 010044 411 KPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 411 kptvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 446 (519)
|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 999987764321 1 235667776666678888654
No 470
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=55.40 E-value=9.5 Score=42.06 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~-----G-------~~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES-----G-------YTVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 46899999999999999998763 5 3589999864
No 471
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=55.39 E-value=32 Score=33.94 Aligned_cols=97 Identities=13% Similarity=0.048 Sum_probs=52.0
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 010044 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (519)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (519)
+..+.|++.. .--..++|+|.|||..|...+.+.... |. +++.+|+. ..| +...++.=|.
T Consensus 166 ~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~qlak~~-----Ga-------~Vi~~~~~----~~~---~~~~~~lGa~ 225 (360)
T 1piw_A 166 LTVYSPLVRN-GCGPGKKVGIVGLGGIGSMGTLISKAM-----GA-------ETYVISRS----SRK---REDAMKMGAD 225 (360)
T ss_dssp HHHHHHHHHT-TCSTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEESS----STT---HHHHHHHTCS
T ss_pred HHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCC----HHH---HHHHHHcCCC
Confidence 3345566553 223578999999999888877766432 52 48888852 222 2111110011
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEeccCC--CCCCCHHHHHHHH
Q 010044 396 ---EHEPVNNLLDAVKVIKPTILIGSSGV--GRTFTKEVIEAMA 434 (519)
Q Consensus 396 ---~~~~~~~L~eav~~vkptvLIG~S~~--~g~Ft~evv~~Ma 434 (519)
+.....++.+.++. +.|++|=+++. +..+ ++.++.|+
T Consensus 226 ~v~~~~~~~~~~~~~~~-~~D~vid~~g~~~~~~~-~~~~~~l~ 267 (360)
T 1piw_A 226 HYIATLEEGDWGEKYFD-TFDLIVVCASSLTDIDF-NIMPKAMK 267 (360)
T ss_dssp EEEEGGGTSCHHHHSCS-CEEEEEECCSCSTTCCT-TTGGGGEE
T ss_pred EEEcCcCchHHHHHhhc-CCCEEEECCCCCcHHHH-HHHHHHhc
Confidence 11111155565652 68998887764 3233 34555554
No 472
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=55.34 E-value=12 Score=38.11 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=26.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g-------~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----G-------HQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----T-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 46899999999999999998764 5 356666654
No 473
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=55.28 E-value=8.1 Score=39.08 Aligned_cols=104 Identities=11% Similarity=0.094 Sum_probs=48.4
Q ss_pred HHHHHHhCCCccc-ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc
Q 010044 319 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 397 (519)
Q Consensus 319 l~Alk~~g~~l~d-~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~ 397 (519)
|+.-.+...++++ .||-|+|+|..|-.-++.+.+.......+. +-.+=+-++|++ . +......+.|-- .
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~--~~~elvav~d~~----~---~~a~~~a~~~~~-~ 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP--KRPHLYALADQD----Q---AMAERHAAKLGA-E 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS--SEEEEEEEECSS----H---HHHHHHHHHHTC-S
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC--CCeEEEEEEcCC----H---HHHHHHHHHcCC-C
Confidence 3334444455655 699999999888766665544321100110 011223456652 1 112222222211 1
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHH-HH
Q 010044 398 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA-MA 434 (519)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~-Ma 434 (519)
.-..++.|.++.-++|+++ ++++. .+..+++.+ |.
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~ 118 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIA 118 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHH
Confidence 1236899999987889877 55544 455555544 44
No 474
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=54.84 E-value=38 Score=31.53 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=42.3
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 010044 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (519)
Q Consensus 327 ~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (519)
..+++.+++|.||+ -.|..+|+.+++ .|. +++++|++- ...+.+. +..+.-+. ..++.+
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~-------~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQ-----EGA-------EVTICARNE----ELLKRSG--HRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HHHHHTC--SEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHH
Confidence 45788999999984 445556666554 352 688888753 0000010 01111111 235666
Q ss_pred Hhccc-CCcEEEeccCCC
Q 010044 406 AVKVI-KPTILIGSSGVG 422 (519)
Q Consensus 406 av~~v-kptvLIG~S~~~ 422 (519)
+++.+ +.|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 66655 799999877643
No 475
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=54.63 E-value=18 Score=36.98 Aligned_cols=115 Identities=18% Similarity=0.166 Sum_probs=65.0
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCc--cCCchhchhhccccCCCCCHH
Q 010044 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAHEHEPVNNLL 404 (519)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~--~~l~~~k~~fa~~~~~~~~L~ 404 (519)
.++-.||.|+|| |..|..+|-+|.+.- =++.... ..+.|+|...-...-.. -+|++---+.........+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~----l~~~~~~-~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGA----LLGPTTP-VELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTT----TTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhcc----ccCCCCc-cEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 456679999997 999999888886531 0111111 26889996421110000 012221111111111125788
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 010044 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFN-EKPLILALSNPT 449 (519)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (519)
+++++ .|++|=+.+.+ |- +=+++.+.+++++ +.-+|+-.|||.
T Consensus 96 ~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 VAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCc
Confidence 99987 99998665543 31 1234566677765 566888899995
No 476
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=54.62 E-value=12 Score=38.91 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
..+|+|+|+|.||+..|..+.+. |- ..++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999999764 41 2478899876
No 477
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=54.35 E-value=19 Score=35.33 Aligned_cols=44 Identities=25% Similarity=0.263 Sum_probs=30.1
Q ss_pred HHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 318 VVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 318 ll~Alk~~g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
.+.|++.. .--.+++++|.|| |..|..+++++.. .| -+++.+|+
T Consensus 158 a~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------a~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKA-----MG-------YRVLGIDG 202 (347)
T ss_dssp HHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEEC
T ss_pred HHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CcEEEEcC
Confidence 35555544 2235689999999 8888888877654 25 26888875
No 478
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=54.26 E-value=1.1e+02 Score=30.69 Aligned_cols=135 Identities=14% Similarity=0.185 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceee--c--CCcchhHHHHHHHHHHHHHhCCCcccceEEEe
Q 010044 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--D--DIQGTASVVLAGVVAALKLIGGTLAEHRFLFL 337 (519)
Q Consensus 262 idefv~av~~~fGp~~lIqfEDf~~~~af~iL~ryr~~~~~Fn--D--DiQGTaaV~LAgll~Alk~~g~~l~d~riv~~ 337 (519)
+...+..+ .+| .++ |-+-.++ +.+.+.+.+|-.++||.| | ..|=| =+||=++.-.+.. ++|++.||+++
T Consensus 88 l~DTarvl-s~~-~D~-iviR~~~-~~~~~~la~~~~~vPVINag~G~~~HPt--QaLaDl~Ti~e~~-g~l~gl~va~v 160 (310)
T 3csu_A 88 LADTISVI-STY-VDA-IVMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPT--QTLLDLFTIQETQ-GRLDNLHVAMV 160 (310)
T ss_dssp HHHHHHHH-TTT-CSE-EEEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHH--HHHHHHHHHHHHH-SCSSSCEEEEE
T ss_pred HHHHHHHH-HHh-CCE-EEEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCch--HHHHHHHHHHHHh-CCcCCcEEEEE
Confidence 33444443 456 443 4456665 455667778865799999 4 34544 4566666655555 47999999999
Q ss_pred CcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc----CCCCCHHHHhcccCCc
Q 010044 338 GAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPT 413 (519)
Q Consensus 338 GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~----~~~~~L~eav~~vkpt 413 (519)
|-|.= --+|+-++.++.+-.|+ ++.++-.+|+--. +.-..+++.. ....++.||+++ +|
T Consensus 161 GD~~~-~rva~Sl~~~~~~~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aD 223 (310)
T 3csu_A 161 GDLKY-GRTVHSLTQALAKFDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VD 223 (310)
T ss_dssp SCTTT-CHHHHHHHHHHHTSSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CS
T ss_pred CCCCC-CchHHHHHHHHHhCCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CC
Confidence 98631 12567777766552264 6888888877332 1112233321 123689999998 99
Q ss_pred EEEeccC
Q 010044 414 ILIGSSG 420 (519)
Q Consensus 414 vLIG~S~ 420 (519)
|+.-..-
T Consensus 224 vvyt~~~ 230 (310)
T 3csu_A 224 ILYMTRV 230 (310)
T ss_dssp EEEECC-
T ss_pred EEEECCc
Confidence 9997654
No 479
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=54.25 E-value=9.7 Score=39.07 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
+.+|||+|||-+|+..|-.|.++ | +++.++|++.-+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~-----G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVD-----G-------KKVLHIDKQDHY 46 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCCCC
Confidence 46899999999999999988763 5 578889887543
No 480
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=54.16 E-value=25 Score=34.79 Aligned_cols=50 Identities=20% Similarity=0.068 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
.++..+.|+.....--..++|+|+|||..|...+.+.... |. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-----Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVC-----GA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHH-----TC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEECC
Confidence 3333344453223333568999999998888777665432 53 46888875
No 481
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=54.06 E-value=23 Score=33.53 Aligned_cols=92 Identities=16% Similarity=0.162 Sum_probs=49.7
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 010044 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (519)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (519)
+.+|+|.|| |-.|..+++.|++. | -+++.+|+. +.. + . .+.-+..+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN-----N-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT-----T-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC-----C-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 88898888888652 5 367777753 111 0 1 111122223567788887
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 410 vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999987764321 02456666665443 6777544
No 482
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=54.03 E-value=11 Score=37.43 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=26.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+..+|+|+|||.||+..|..|.+. |. .++.++++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~ 39 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERT 39 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECC
Confidence 456899999999999999998753 41 356677664
No 483
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=53.92 E-value=7.8 Score=38.45 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=30.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999999764 4 368888864
No 484
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=53.83 E-value=27 Score=34.08 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=57.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchh----------chhhcc-ccCC
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----------KKPWAH-EHEP 399 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~----------k~~fa~-~~~~ 399 (519)
.+|+|.|| |-.|..+++.|++. | -+++++|+..--.. .+.+... +..+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK-----G-------YEVHGIVRRSSSFN--TGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCCSSCC--CTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHHC-----C-------CEEEEEECCccccc--hhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 88888888888652 5 36888887521000 0112111 111111 1112
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCC---CcEEEEcC
Q 010044 400 VNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNE---KPLILALS 446 (519)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~e---rPIIFaLS 446 (519)
..++.++++.+++|++|=+.+.... -+..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357788888889999988775421 12345666655443 57887544
No 485
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=53.80 E-value=8.9 Score=40.91 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4679999999999999988865 364 58888886
No 486
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=53.79 E-value=69 Score=32.25 Aligned_cols=135 Identities=13% Similarity=0.156 Sum_probs=82.4
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceee--cCCcchhHHHHHHHHHHHHHhCCCcc-cceEEEeC
Q 010044 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLG 338 (519)
Q Consensus 262 idefv~av~~~fGp~~lIqfEDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~l~-d~riv~~G 338 (519)
+.+.+..+. +| .++ |-+-.++ +.+.+.+.+|- ++||.| || +-=-+=+||=++.-.+. .++|+ +.||+++|
T Consensus 81 l~DTarvls-~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~-~g~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVIG-AM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEW-NKMQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHHH-HH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHT-TCCGGGCCEEEEES
T ss_pred HHHHHHHHH-Hh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHH-hCCCCCCCEEEEEc
Confidence 344555443 45 443 4455554 45556666665 689998 54 33344566666654444 45799 99999999
Q ss_pred cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc----CCCCCHHHHhcccCCcE
Q 010044 339 AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTI 414 (519)
Q Consensus 339 AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~----~~~~~L~eav~~vkptv 414 (519)
-+. -+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-...+.+|+.. ....++.|||++ +||
T Consensus 154 D~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 974 478888777766 364 68888887774321 1111122333321 123689999998 999
Q ss_pred EEecc
Q 010044 415 LIGSS 419 (519)
Q Consensus 415 LIG~S 419 (519)
+.-..
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 97654
No 487
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=53.76 E-value=7.3 Score=40.42 Aligned_cols=97 Identities=18% Similarity=0.199 Sum_probs=53.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH-hcc
Q 010044 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA-VKV 409 (519)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea-v~~ 409 (519)
.+|+|+|.|..|..+|++|... | ..+.++|++- ++-+.+.....+... +......|.++ ++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-----g-------~~vvvId~d~----~~v~~~~~~g~~vi~GDat~~~~L~~agi~- 67 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-----G-------VKMVVLDHDP----DHIETLRKFGMKVFYGDATRMDLLESAGAA- 67 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECCH----HHHHHHHHTTCCCEESCTTCHHHHHHTTTT-
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECCH----HHHHHHHhCCCeEEEcCCCCHHHHHhcCCC-
Confidence 4799999999999999999763 5 3688898751 110101111001111 11111234444 44
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 010044 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (519)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (519)
+++++|-+.... .-+..++....+.+...-|++.+|
T Consensus 68 -~A~~viv~~~~~-~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 68 -KAEVLINAIDDP-QTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp -TCSEEEECCSSH-HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred -ccCEEEECCCCh-HHHHHHHHHHHHhCCCCeEEEEEC
Confidence 589888666532 334444554445566655666555
No 488
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=53.71 E-value=12 Score=39.62 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=31.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCcc
Q 010044 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (519)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (519)
.+-.+..|||+|||.||+..|-.+.+ .|. ++.++++...+
T Consensus 122 ~~~~~~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 122 APHDTVDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 34456789999999999999988865 263 68899887554
No 489
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=53.70 E-value=23 Score=35.41 Aligned_cols=48 Identities=21% Similarity=0.135 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
++..+.|++. ..--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 171 ~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 4445566664 333357899999999888877665543 363 57888876
No 490
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=53.67 E-value=10 Score=40.47 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (519)
+..|||+|||.+|+++|-.+.+. |+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r-----G~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS-----GI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCCC
Confidence 45799999999999999988753 64 588998764
No 491
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=53.62 E-value=9.8 Score=43.78 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|+|+|||.||+..|..|.+. |. +++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-----G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-----GY------SDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhc-----CC------CcEEEEeCC
Confidence 56899999999999999998763 53 268899986
No 492
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=53.58 E-value=10 Score=38.81 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+..|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~-----G-------~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL-----G-------KKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-----T-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999888652 5 368899984
No 493
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=53.42 E-value=28 Score=34.05 Aligned_cols=79 Identities=18% Similarity=0.325 Sum_probs=50.6
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 010044 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (519)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (519)
||+|.| +|-.|..+++.|++. |. -+++.+|+. .+..+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 789999 589999999888764 42 256666654 111346677765
Q ss_pred CcEEEeccCCCC------------CCCHHHHHHHHcCCCC-cEEEEcC
Q 010044 412 PTILIGSSGVGR------------TFTKEVIEAMASFNEK-PLILALS 446 (519)
Q Consensus 412 ptvLIG~S~~~g------------~Ft~evv~~Ma~~~er-PIIFaLS 446 (519)
+|++|=+.+... ..+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 888886654321 1245678887765544 6777543
No 494
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=53.23 E-value=13 Score=35.22 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=39.1
Q ss_pred CCCcccceEEEeCcc-hHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCH
Q 010044 326 GGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNL 403 (519)
Q Consensus 326 g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L 403 (519)
+.++.++++||-||+ -.|.++|+.+++ .|. +++++|++- ++.+.+...+..+.. +..+..++
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v 74 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSE-----EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTF 74 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHH-----TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHH
Confidence 345778899999974 345555555543 363 688888741 110111111111111 11222345
Q ss_pred HHHhccc-----CCcEEEeccCC
Q 010044 404 LDAVKVI-----KPTILIGSSGV 421 (519)
Q Consensus 404 ~eav~~v-----kptvLIG~S~~ 421 (519)
.++++.+ ++|+||=..+.
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnAg~ 97 (266)
T 3p19_A 75 DTAITRAEKIYGPADAIVNNAGM 97 (266)
T ss_dssp HHHHHHHHHHHCSEEEEEECCCC
T ss_pred HHHHHHHHHHCCCCCEEEECCCc
Confidence 5555544 68999977664
No 495
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=52.97 E-value=9.3 Score=44.51 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=33.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|++.||+++|||.-|.-+++.|+.+ |+... ...+|.++|.+
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D 463 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDND 463 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCC
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCC
Confidence 46789999999999999999999887 44111 12689999976
No 496
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=52.91 E-value=24 Score=34.04 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=59.2
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccCCccCCch-----hchhhcc-ccCCCC
Q 010044 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 401 (519)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~-----~k~~fa~-~~~~~~ 401 (519)
+++.+|+|.|| |-.|..+++.|++. | -+++++|+.. .+...+.. .+..+.. +..+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM-----G-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 88888888888752 5 3688888742 11111110 0111111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 010044 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 446 (519)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 446 (519)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57778887789999988775321 0233566655543 467888655
No 497
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=52.87 E-value=29 Score=34.33 Aligned_cols=46 Identities=20% Similarity=0.168 Sum_probs=31.7
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEec
Q 010044 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (519)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (519)
..+.+++..+.+...++|+|.|||..|...+.+.... | | +++.+|+
T Consensus 167 ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-----G-----a--~Vi~~~~ 212 (357)
T 2cf5_A 167 TVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAM-----G-----H--HVTVISS 212 (357)
T ss_dssp HHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHH-----T-----C--EEEEEES
T ss_pred HHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHC-----C-----C--eEEEEeC
Confidence 3455666555443678999999999888877665432 5 2 5777776
No 498
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=52.75 E-value=10 Score=36.38 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=57.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecCCccccC---CccCCchhch------hhcc-ccCCC
Q 010044 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RKDSLQHFKK------PWAH-EHEPV 400 (519)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~---R~~~l~~~k~------~fa~-~~~~~ 400 (519)
.+|+|.|| |-.|..+++.|++. | -+++++|+.---..+ ..+.+...+. .+.. +..+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEA-----G-------YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT-----T-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-----C-------CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 57999986 88888888888752 5 368888764210000 0000110000 1111 11112
Q ss_pred CCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 010044 401 NNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (519)
Q Consensus 401 ~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (519)
.++.++++..++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 357777876679999988775421 1345677777665567888543
No 499
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=52.70 E-value=9.3 Score=38.67 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=25.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+.+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~-----g~-------~v~v~E~~ 48 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSR-----GT-------DAVLLESS 48 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEEcC
Confidence 35899999999999999988653 53 56666665
No 500
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=52.63 E-value=13 Score=35.09 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=27.6
Q ss_pred CcccceEEEeCcch---HHHHHHHHHHHHHHhhcCCChhhhcCcEEEEecC
Q 010044 328 TLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (519)
Q Consensus 328 ~l~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (519)
+|+++++||-||++ .|.+||+.+++ +|. +++++|++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQ-----LGA-------KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 68999999999853 66677777765 363 68899875
Done!