BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010045
(519 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 316/537 (58%), Positives = 385/537 (71%), Gaps = 19/537 (3%)
Query: 1 MDEYLDHYFSSSSWSDVNAKERSSWDYSEPLQQNQLLPNSIGVYKDDEKNSPVGIA---- 56
MDEYLDH FSS+SWSDVN KE SSW EP Q N +L +SIG+Y+ D+KNSPVG+
Sbjct: 1 MDEYLDHLFSSTSWSDVNVKEGSSWICGEPSQTNGMLSDSIGIYEGDKKNSPVGMTNSNL 60
Query: 57 -MEGLAAQDTSSFVLGEESEYGIDKNLLSEETQYEKDGQNCNGNLS---SMNRSLKLGNV 112
+EGL QDTSS VLG ES++G+ K LL EE ++D QN GN S ++N S ++G V
Sbjct: 61 MIEGLVTQDTSSIVLGGESDHGLGKGLLLEEAPRQQDLQNTEGNSSLNGAVNGSSEVGYV 120
Query: 113 GLQYDPAIPTLGSMNLGSPKQLPLIGEMT-TSPSFVDSEHVGGNSSELSDIQRSLRDLQT 171
GLQ + T S++LGSPKQL LIG M+ +S F + +HVG N +E SD QRS+ + Q
Sbjct: 121 GLQLNTPTSTPCSLDLGSPKQLSLIGGMSRSSRPFTELDHVGCNGNEPSDFQRSVGNFQA 180
Query: 172 ISPSPELWLPTSYEEVSSLSSVIEQPRTRGFYLQGATMNHDVDTTGNRYVGMDKILQFDY 231
+ P P+LW SY SSLS V+ + + +GF LQG +++++D NRYVG D+ILQ D
Sbjct: 181 LPPIPQLWSQPSYGGGSSLSPVMGEYKMQGFGLQGEYVDNEMDIMRNRYVG-DEILQLDN 239
Query: 232 LSASIVAKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRAR 291
+S++I KG++E HP S + P T+ GL SL QT +GGCNGTGK RVRAR
Sbjct: 240 ISSAIPIKGKEEQHTHPFSPSAVGPHMTMTASGLQSLPQTTVGTASGGCNGTGKPRVRAR 299
Query: 292 RGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
RGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEII+YVKFLQLQVKVLS
Sbjct: 300 RGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLS 359
Query: 352 MSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTK 411
MSRLGAA AV+PLITDGQAE SKGLSLSP A Q DI + DQIAFE+EVVKLMESNVT
Sbjct: 360 MSRLGAAEAVVPLITDGQAEGSKGLSLSPSAGQAEDICQSPDQIAFEQEVVKLMESNVTM 419
Query: 412 AMQYLQNKGLCLMPIALATAISSGKASSSDTISEENKFCFSNGLV------QSNSSSASS 465
AMQYLQ+KGLCLMPIALATAISSGKA+SS T S+E K G + + SSS +S
Sbjct: 420 AMQYLQSKGLCLMPIALATAISSGKAASSGTGSDEGKNGLIGGFIPNNNSSSNTSSSNTS 479
Query: 466 NSSLPNNGINQMPLNTNIIIGKPIGESILVNGCNRAV---KEERNSQCTARELKPKT 519
++SLP G + + N++IGK E I + CN A+ +E +++ CTARELK KT
Sbjct: 480 SNSLPGIGTHHTSSDGNVLIGKLSREGITTSSCNGAINKQEELKSTSCTARELKAKT 536
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 288/529 (54%), Positives = 365/529 (68%), Gaps = 12/529 (2%)
Query: 1 MDEYLDHYFSSSSWSDVNAKERSSWDYSEPLQQNQLLPNSIGVYKDDEKNSPVGIA---- 56
MDEY+D FSSS W+D +AKERS WDYSE Q N + S+ ++++D+ NS + +
Sbjct: 59 MDEYIDRLFSSSPWADGDAKERSCWDYSETGQLNVSVSTSLRLHENDKGNSLLSVTSSEQ 118
Query: 57 -MEGLAAQDTSSFVLGEESEYGIDKNLLSEETQYEKDGQNCNGNLSSM-NRSLKLGNVGL 114
++ L AQDT S L ES+Y +DK L S + Q +K+GQNCN + S M N SLK+ N+GL
Sbjct: 119 NIDCLPAQDTPSLGLDSESDYVVDKGLFSGKAQSQKEGQNCNHDPSPMINGSLKMKNMGL 178
Query: 115 QYDPAIPTLGSMNLGSPKQLPLIGEMTTSPSFVDSEHVGGNSSELSDIQRSLRDLQTISP 174
QYD A+PTL S+ L KQLP++ ++T+ SF + G N S + QRS +D+Q S
Sbjct: 179 QYDTALPTLNSVGLSYSKQLPVLDDLTSPLSFTKANRAGLNDSARFEYQRSFKDVQNPSS 238
Query: 175 SPELWLPTSYEEVSSLSSVIEQPRTRGFYLQGATMNHDVDTTGNRYVGMDKILQFDYLSA 234
+LW TS+E+VSSLS+ + Q T+ F LQG + D+D G RY+ MD ILQ D LSA
Sbjct: 239 MTQLWPSTSFEDVSSLSAAMGQDTTQQFDLQG-NLGDDLDFLGRRYISMDNILQLDKLSA 297
Query: 235 SIVAKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQ 294
S+V+K ++ L +PLS F+ T+ T G+ L QTAS P CNGTGK RVRARRGQ
Sbjct: 298 SVVSKDKENLQGYPLSRFTVGSNMTMTTNGVSYLSQTASTAPAASCNGTGKPRVRARRGQ 357
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 354
ATDPHSIAERLRREKIAERMKNLQELVPNS+K DKASMLDEII+YVKFLQLQVKVLSMSR
Sbjct: 358 ATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQVKVLSMSR 417
Query: 355 LGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQ 414
LGA GAV+PLITDGQAE S LSLS A G+D++ +SDQIAFE EV+KL+ESNVTKA+Q
Sbjct: 418 LGATGAVIPLITDGQAEGSNSLSLSTSAGLGIDVAPSSDQIAFEHEVLKLLESNVTKAIQ 477
Query: 415 YLQNKGLCLMPIALATAISSGKAS-SSDTISEENKFCFSNGLVQSNSSSASSNSSLPNNG 473
YLQ KG CLMPIALA AISSGKAS S ++ ++ K F+ +V N+ S+ S+SS N
Sbjct: 478 YLQGKGFCLMPIALAAAISSGKASLSCNSPDDKKKIRFNTDIVHDNNGSSRSSSSSSCNF 537
Query: 474 ----INQMPLNTNIIIGKPIGESILVNGCNRAVKEERNSQCTARELKPK 518
Q+ + NI+ + + ++ NGCN +K E RELKPK
Sbjct: 538 SGTETCQVSYDCNIMTEQLGSKGMVGNGCNGILKLEDAKNQFLRELKPK 586
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/456 (56%), Positives = 323/456 (70%), Gaps = 17/456 (3%)
Query: 56 AMEGLAAQDTSSFVLGEESEYGIDKNLLSEETQYEKDGQNCNGNLS--SMNR-SLKLGNV 112
++E LA QDTSS VLG ES+Y +DK L+SE+ + + D QNCNGN S M R +LK GN
Sbjct: 7 SVESLATQDTSSVVLGSESDYAVDKVLISEQARLQNDCQNCNGNPSPDGMARGNLKFGNT 66
Query: 113 GLQYDPAIPTLGSMNLGSPKQLPLIGEMTTSPSFVDSEHVGGNSSELSDIQRSLRDLQTI 172
GLQ + +PTL S+N P QLP++G++T+ SF ++ + G N E S+ RSL++LQ +
Sbjct: 67 GLQCNGILPTLSSLNY--PNQLPIVGDLTSYLSFSEASNAGCNGREQSEYLRSLKNLQNL 124
Query: 173 SPSPELWLPTSYEEVSSLSSVIEQPRTRGFYLQGATMNHDVDTTGNRYVGMDKILQFDYL 232
S P+LW SYE VSSL ++ Q R G L+G ++ D+ G Y+GMD+IL+ D L
Sbjct: 125 SSIPQLWPSQSYEGVSSLPPLMGQDRIEGSGLRGGNLDDDMHIMGKGYMGMDEILRLDKL 184
Query: 233 SASIVAKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARR 292
SAS +G+++L + P S + P + L S+ QT SA P GCNGTGK RVRARR
Sbjct: 185 SASPTTEGKEDLQSCPFSSGIAEPNVNMSMNQLSSMPQTTSAAPVEGCNGTGKTRVRARR 244
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
G ATDPHSIAERLRREKIAERMKNLQELVPNSNK DKASMLDEII+YVKFLQLQVKVLSM
Sbjct: 245 GHATDPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVLSM 304
Query: 353 SRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKA 412
SRLGAAGAV+PL+TDGQ E LSLSP A G+DIS ++DQIAFE+EV+KL+ES+VT A
Sbjct: 305 SRLGAAGAVIPLLTDGQPEGHNSLSLSPSAGLGIDISPSADQIAFEQEVLKLLESDVTMA 364
Query: 413 MQYLQNKGLCLMPIALATAISSGKASSSDTISEENK-FCFSNGLVQSNSSSASSNSSLPN 471
MQYLQ+KGLCLMPIALA AISS KAS S T SEE K +++GLV S+SS
Sbjct: 365 MQYLQSKGLCLMPIALAAAISSVKASLSGTTSEERKNNGYTSGLVSSSSSIT-------- 416
Query: 472 NGINQMPL--NTNIIIGKPIGESILVNGCNRAVKEE 505
GI+ P+ + NI G + ++VNGCN VK+E
Sbjct: 417 -GIDTHPMSNDNNIATGTLSSKGMIVNGCNEVVKQE 451
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/383 (60%), Positives = 280/383 (73%), Gaps = 10/383 (2%)
Query: 146 FVDSEHVGGNSSELSDIQRSLRDLQTISPSPELWLPTSYEEVSSLSSVIEQPRTRGFYLQ 205
F + +HVG N +E SD QRS+ + Q + P P+LW SY SSLS V+ + + +GF LQ
Sbjct: 8 FTELDHVGCNGNEPSDFQRSVGNFQALPPIPQLWSQPSYGGGSSLSPVMGEYKMQGFGLQ 67
Query: 206 GATMNHDVDTTGNRYVGMDKILQFDYLSASIVAKGEQELPNHPLSCFSSRPLPTVPTVGL 265
G +++++D NRYVG D+ILQ D +S++I KG++E HP S + P T+ GL
Sbjct: 68 GEYVDNEMDIMRNRYVG-DEILQLDNISSAIPIKGKEEQHTHPFSPSAVGPHMTMTASGL 126
Query: 266 PSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN 325
SL QT +GGCNGTGK RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN
Sbjct: 127 QSLPQTTVGTASGGCNGTGKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN 186
Query: 326 KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQG 385
KTDKASMLDEII+YVKFLQLQVKVLSMSRLGAA AV+PLITDGQAE SKGLSLSP A Q
Sbjct: 187 KTDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAEAVVPLITDGQAEGSKGLSLSPSAGQA 246
Query: 386 VDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISE 445
DI + DQIAFE+EVVKLMESNVT AMQYLQ+KGLCLMPIALATAISSGKA+SS T S+
Sbjct: 247 EDICQSPDQIAFEQEVVKLMESNVTMAMQYLQSKGLCLMPIALATAISSGKAASSGTGSD 306
Query: 446 ENKFCFSNGLV------QSNSSSASSNSSLPNNGINQMPLNTNIIIGKPIGESILVNGCN 499
E K G + + SSS +S++SLP G + + N++IGK E I + CN
Sbjct: 307 EGKNGLIGGFIPNNNSSSNTSSSNTSSNSLPGIGTHHTSSDGNVLIGKLSREGITTSSCN 366
Query: 500 RAV---KEERNSQCTARELKPKT 519
A+ +E +++ CTARELK KT
Sbjct: 367 GAINKQEELKSTSCTARELKAKT 389
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/189 (68%), Positives = 146/189 (77%), Gaps = 6/189 (3%)
Query: 263 VGLPSLQQTASANPTGGCNGTG-KARVRARRGQATDPHSIAERLRREKIAERMKNLQELV 321
V PS QT P NG G K RVRARRGQATDPHSIAERLRREKI++RMK+LQ+LV
Sbjct: 297 VSHPSDVQT---QPNSAGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLV 353
Query: 322 PNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLS-P 380
PNSNK DKASMLDEIIDYVKFLQLQVKVLSMSRLGA GAVLPL+T+ Q E G LS P
Sbjct: 354 PNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLPLLTESQTEGYHGQPLSAP 413
Query: 381 QADQGVDISLNS-DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
QG+ +L+S D FEEEVVKLME+++T AMQYLQNKGLCLMP+ALA+AIS+ K S
Sbjct: 414 TNTQGLLDALDSEDAFVFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAISTQKGVS 473
Query: 440 SDTISEENK 448
+ I E +
Sbjct: 474 AAAIPPERR 482
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 140/174 (80%), Gaps = 3/174 (1%)
Query: 276 PTGGCNGTG-KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
P NG G K RVRARRGQATDPHSIAERLRREKI++RMKNLQ+LVPNSNK DKASMLD
Sbjct: 307 PNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLD 366
Query: 335 EIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLS-PQADQG-VDISLNS 392
EIIDYVKFLQLQVKVLSMSRLGA GAVLPL+ + Q E +G LS P QG +D +
Sbjct: 367 EIIDYVKFLQLQVKVLSMSRLGAPGAVLPLLAESQTEGYRGQLLSAPTNAQGLLDTEESE 426
Query: 393 DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEE 446
D AFEEEVVKLME+++T AMQYLQNKGLCLMP+ALA+AIS+ K S+ +I E
Sbjct: 427 DTFAFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAISTQKGVSAASIPPE 480
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 140/174 (80%), Gaps = 3/174 (1%)
Query: 276 PTGGCNGTG-KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
P NG G K RVRARRGQATDPHSIAERLRREKI++RMKNLQ+LVPNSNK DKASMLD
Sbjct: 307 PNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLD 366
Query: 335 EIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLS-PQADQG-VDISLNS 392
EIIDYVKFLQLQVKVLSMSRLGA GAVLPL+ + Q E +G LS P QG +D +
Sbjct: 367 EIIDYVKFLQLQVKVLSMSRLGAPGAVLPLLAESQTEGYRGQLLSAPTNAQGLLDTEESE 426
Query: 393 DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEE 446
D AFEEEVVKLME+++T AMQYLQNKGLCLMP+ALA+AIS+ K S+ +I E
Sbjct: 427 DTFAFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAISTQKGVSAASIPPE 480
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 140/174 (80%), Gaps = 3/174 (1%)
Query: 276 PTGGCNGTG-KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
P NG G K RVRARRGQATDPHSIAERLRREKI++RMKNLQ+LVPNSNK DKASMLD
Sbjct: 307 PNSVGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLD 366
Query: 335 EIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLS-PQADQG-VDISLNS 392
EIID+VKFLQLQVKVLSMSRLGA GAVLPL+ + Q E +G LS P QG +D +
Sbjct: 367 EIIDHVKFLQLQVKVLSMSRLGAPGAVLPLLAESQTEGYRGQLLSAPTNAQGLLDTEESE 426
Query: 393 DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEE 446
D AFEEEVVKLME+++T AMQYLQNKGLCLMP+ALA+AIS+ K S+ +I E
Sbjct: 427 DTFAFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAISTQKGVSAASIPPE 480
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
AN G + + K R RARRGQATDPHSIAERLRREKI+ERMKNLQ+LVPNSNK DK+SML
Sbjct: 306 ANSGNGNSASAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSML 365
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSL-SPQADQG-VDISLN 391
DEIIDYVKFLQLQVKVLSMSRLGA GAVLPL+ + Q E L SP QG +D++
Sbjct: 366 DEIIDYVKFLQLQVKVLSMSRLGAPGAVLPLLAESQTEGRSNSPLSSPTTSQGLLDVAGP 425
Query: 392 SDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEE 446
D + FE+EV+KLME+++T AMQYLQNKGLCLMPIALA+AIS+ K +S+ I E
Sbjct: 426 DDSLVFEQEVIKLMETSITNAMQYLQNKGLCLMPIALASAISNQKGTSAAAIPPE 480
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
AN G + + K R RARRGQATDPHSIAERLRREKI+ERMKNLQ+LVPNSNK DK+SML
Sbjct: 305 ANSANGNSASAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSML 364
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSL-SPQADQG-VDISLN 391
DEIIDYVKFLQLQVKVL MSRLGA GAVLPL+ + Q E L SP A QG +D +
Sbjct: 365 DEIIDYVKFLQLQVKVLCMSRLGAPGAVLPLLAESQTEGRSNSPLSSPTASQGLLDAAGP 424
Query: 392 SDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEE 446
D + FE+EV+KLME+++T AMQYLQNKGLCLMPIALA+AIS+ K +S+ I E
Sbjct: 425 EDSLVFEQEVIKLMETSITNAMQYLQNKGLCLMPIALASAISNQKGTSAAAIPPE 479
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 143/186 (76%), Gaps = 9/186 (4%)
Query: 263 VGLPSLQQTASANPTGGCNGTG-KARVRARRGQATDPHSIAERLRREKIAERMKNLQELV 321
V PS QT P NG G K RVRARRGQATDPHSIAERLRREKI++RMKNLQ+LV
Sbjct: 294 VSHPSDVQT---QPNSAVNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLV 350
Query: 322 PNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQ 381
PNSNK DKASMLDEIIDYVKFLQLQVKVLSMSR+GA GAVLPL+T+ + E G L
Sbjct: 351 PNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRVGAPGAVLPLLTESKTEGYHGQPLP-- 408
Query: 382 ADQGVDISLNS-DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSS 440
QG+ +L+S D FEEEVVKLME+++T AMQYLQ+KGLCLMP+ALA+AIS+ K S+
Sbjct: 409 --QGLLDALDSEDSFVFEEEVVKLMETSITSAMQYLQSKGLCLMPVALASAISTQKGVSA 466
Query: 441 DTISEE 446
+ E
Sbjct: 467 AAVPPE 472
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
AN G + + K R RARRGQATDPHSIAERLRREKI+ERMKNLQELVPNSNK DK+SML
Sbjct: 307 ANSAHGNSVSAKPRSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSML 366
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLS-PQADQG-VDISLN 391
DEIIDYVKFLQLQVKVLSMSRLGA GAVLPL+ + Q E SLS QG +D++
Sbjct: 367 DEIIDYVKFLQLQVKVLSMSRLGAPGAVLPLLRESQTEGHSNSSLSGTTTSQGLLDVANP 426
Query: 392 SDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEE 446
D + FE+EV+KLME+++T AMQYLQNKGLCLMPIALA+AIS+ K S+ I E
Sbjct: 427 EDSVVFEQEVIKLMETSITSAMQYLQNKGLCLMPIALASAISNQKGVSAAAIPPE 481
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 143/186 (76%), Gaps = 9/186 (4%)
Query: 263 VGLPSLQQTASANPTGGCNGTG-KARVRARRGQATDPHSIAERLRREKIAERMKNLQELV 321
V PS QT P NG G K RVRARRGQATDPHSIAERLRREKI++RMKNLQ+LV
Sbjct: 259 VSHPSDVQT---QPNSAVNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLV 315
Query: 322 PNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQ 381
PNSNK DKASMLDEIIDYVKFLQLQVKVLSMSR+GA GAVLPL+T+ + E G L
Sbjct: 316 PNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRVGAPGAVLPLLTESKTEGYHGQPLP-- 373
Query: 382 ADQGVDISLNS-DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSS 440
QG+ +L+S D FEEEVVKLME+++T AMQYLQ+KGLCLMP+ALA+AIS+ K S+
Sbjct: 374 --QGLLDALDSEDSFVFEEEVVKLMETSITSAMQYLQSKGLCLMPVALASAISTQKGVSA 431
Query: 441 DTISEE 446
+ E
Sbjct: 432 AAVPPE 437
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/326 (46%), Positives = 185/326 (56%), Gaps = 54/326 (16%)
Query: 160 SDIQRSLRDLQTISPSPELWLPTSYEEVSSLSSVIEQPRTRGFYLQGA----TMNHDVDT 215
SDI L D+ +S +P L ++++ VSS +E F QGA +N
Sbjct: 145 SDISAFLADVHAVSSAPTLC--SAFQNVSSF---MEPVNLDAFGFQGAQNVAMLNKTSLP 199
Query: 216 TGN----------------RYVGMDKILQFDYLSASIVAKG------EQELPNHPLSCFS 253
GN ++ I F + ++ A G EQ + N PL F+
Sbjct: 200 NGNPSLFDNAAIASLHDSKEFLNGGSIPSFGTVLQALGAGGLKAAQQEQNIRNIPLPTFT 259
Query: 254 SRPL--------PTVPTVGLPSLQQTAS-------------ANPTGGCNGTGKARVRARR 292
S P +P+ P + S AN G + K R RARR
Sbjct: 260 SGSHLAVTDAQGPPLPSKIPPLIHDHNSEYPINHSSDVEPQANSAPGNSANAKPRTRARR 319
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
GQATDPHSIAERLRREKI+ERMKNLQ+LVPNSNK DKASMLDEIIDYVKFLQLQVKVLSM
Sbjct: 320 GQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 379
Query: 353 SRLGAAGAVLPLITDGQAEASKGLSLSPQA-DQG-VDISLNSDQIAFEEEVVKLMESNVT 410
SRLGA GAVLPL+ + Q E SLS QG D+ + D AFE+EVVKLME+++T
Sbjct: 380 SRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPTDMPDSEDSSAFEQEVVKLMETSIT 439
Query: 411 KAMQYLQNKGLCLMPIALATAISSGK 436
AMQYLQNKGLCLMPIALA+AIS+ K
Sbjct: 440 SAMQYLQNKGLCLMPIALASAISNQK 465
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/326 (46%), Positives = 183/326 (56%), Gaps = 54/326 (16%)
Query: 160 SDIQRSLRDLQTISPSPELWLPTSYEEVSSLSSVIEQPRTRGFYLQGA----TMNHDVDT 215
SDI L D+ +S +P L ++++ VSS +E F QGA +N
Sbjct: 146 SDISAFLADVHAVSSAPTLC--SAFQNVSSF---MEPVNLDAFGFQGAQNVAMLNKTSLP 200
Query: 216 TGN----------------RYVGMDKILQFDYLSASIVAKG------EQELPNHPLSCFS 253
GN ++ I F + ++ A G EQ + N PL F+
Sbjct: 201 NGNPSLFDNAAIASLHDSKEFLNGGSIPSFGTVLQALGAGGLKAAQQEQNIRNIPLPTFT 260
Query: 254 SRPL--------PTVPTVGLPSLQQTAS-------------ANPTGGCNGTGKARVRARR 292
S P +P+ P + S AN G + K R RARR
Sbjct: 261 SGSHLAVTDAQGPPLPSKIPPLIHDHNSEYPINHSSDVEPQANSAPGNSANAKPRTRARR 320
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
GQATDPHSIAERLRREKI+ERMKNLQ LVPNSNK DKASMLDEIIDYVKFLQLQVKVLSM
Sbjct: 321 GQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
Query: 353 SRLGAAGAVLPLITDGQAEASKGLSLSPQA-DQG-VDISLNSDQIAFEEEVVKLMESNVT 410
SRLGA GAVLPL+ + Q E SLS QG D+ + D AFE+EVVKLME+++
Sbjct: 381 SRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPTDMPDSEDSSAFEQEVVKLMETSII 440
Query: 411 KAMQYLQNKGLCLMPIALATAISSGK 436
AMQYLQNKGLCLMPIALA+AIS+ K
Sbjct: 441 SAMQYLQNKGLCLMPIALASAISNQK 466
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 184/330 (55%), Gaps = 62/330 (18%)
Query: 160 SDIQRSLRDLQTISPSPELWLPTSYEEVSSLSSVIEQPRTRGFYLQGA----TMNHDVDT 215
SDI L D+ +S +P L ++++ VSS +E F QGA +N
Sbjct: 146 SDISAFLADVHAVSSAPTLC--SAFQNVSSF---MEPVNLDAFGFQGAQNVAMLNKTSLP 200
Query: 216 TGN----------------RYVGMDKILQFDYLSASIVAKG------EQELPNHPLSCFS 253
GN ++ I F + ++ A G EQ + N PL F+
Sbjct: 201 NGNPSLFDNAAIASLHDSKEFLNGGSIPSFGTVLQALGAGGLKAAQQEQNIRNIPLPTFT 260
Query: 254 S-----------RPLPTVPTVGLPSLQQTAS--------------ANPTGGCNGTGKARV 288
S PLP+ +P L + AN G + K R
Sbjct: 261 SGSHLAVTDAQGPPLPS----KIPPLTHDHNSEYPINHSSDVEPQANSAPGNSANAKPRT 316
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
RARRGQATDPHSIAERLRREKI+ERMKNLQ LVPNSNK DKASMLDEIIDYVKFLQLQVK
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVK 376
Query: 349 VLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQA-DQG-VDISLNSDQIAFEEEVVKLME 406
VLSMSRLGA GAVLPL+ + Q E SLS QG D+ + D AFE+EVVKLME
Sbjct: 377 VLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVVKLME 436
Query: 407 SNVTKAMQYLQNKGLCLMPIALATAISSGK 436
+++ AMQYLQNKGLCLMPIALA+AIS+ K
Sbjct: 437 TSIISAMQYLQNKGLCLMPIALASAISNQK 466
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/326 (46%), Positives = 183/326 (56%), Gaps = 54/326 (16%)
Query: 160 SDIQRSLRDLQTISPSPELWLPTSYEEVSSLSSVIEQPRTRGFYLQGA----TMNHDVDT 215
SDI L D+ +S +P L ++++ VSS +E F QGA +N
Sbjct: 146 SDISAFLADVHAVSSAPTLC--SAFQNVSSF---MEPVNLDAFGFQGAQNVAMLNKTSLP 200
Query: 216 TGN----------------RYVGMDKILQFDYLSASIVAKG------EQELPNHPLSCFS 253
GN ++ I F + ++ A G EQ + N PL F+
Sbjct: 201 NGNPSLFDNAAIASLHDSKEFLNGGSIPSFGTVLQALGAGGLKAAQQEQNIRNIPLPTFT 260
Query: 254 SRPL--------PTVPTVGLPSLQQTAS-------------ANPTGGCNGTGKARVRARR 292
S P +P+ P + S AN G + K R RARR
Sbjct: 261 SGSHLAVTDAQGPPLPSKIPPLIHDHNSEYPINHSSDVEPQANSAPGNSANAKPRTRARR 320
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
GQATDPHSIAERLRREKI+ERMKNLQ LVPNSNK DKASMLDEIIDYVKFLQLQVKVLSM
Sbjct: 321 GQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSM 380
Query: 353 SRLGAAGAVLPLITDGQAEASKGLSLSPQA-DQG-VDISLNSDQIAFEEEVVKLMESNVT 410
SRLGA GAVLPL+ + Q E SLS QG D+ + D AFE+EVVKLME+++
Sbjct: 381 SRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVVKLMETSII 440
Query: 411 KAMQYLQNKGLCLMPIALATAISSGK 436
AMQYLQNKGLCLMPIALA+AIS+ K
Sbjct: 441 SAMQYLQNKGLCLMPIALASAISNQK 466
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 138/179 (77%), Gaps = 16/179 (8%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RVRARRGQATDPHSIAERLRREKI++RMK+LQELVPNSNKT+KASMLDEIIDYVKFLQ
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQG--------VDISLNSDQ-- 394
LQVKVLSMSRLGAA AV+PL+T+ Q E S G LSP++ G V L DQ
Sbjct: 371 LQVKVLSMSRLGAAEAVVPLLTETQTE-SPGFLLSPRSSSGERQAGAGAVTGGLPGDQPE 429
Query: 395 -----IAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEENK 448
FE+EVVKLME N+T AMQYLQ+KGLCLMP+ALA+AIS+ K +SS + E K
Sbjct: 430 LLDGGAMFEQEVVKLMEDNMTTAMQYLQSKGLCLMPVALASAISAQKGTSSAAVRPEKK 488
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 138/179 (77%), Gaps = 16/179 (8%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RVRARRGQATDPHSIAERLRREKI++RMK+LQELVPNSNKT+KASMLDEIIDYVKFLQ
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQG--------VDISLNSDQ-- 394
LQVKVLSMSRLGAA AV+PL+T+ Q E S G LSP++ G V L DQ
Sbjct: 371 LQVKVLSMSRLGAAEAVVPLLTETQTE-SPGFLLSPRSSSGERQAGAGAVTGGLPGDQPE 429
Query: 395 -----IAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEENK 448
FE+EVVKLME N+T AMQYLQ+KGLCLMP+ALA+AIS+ K +SS + E K
Sbjct: 430 LLDGGAMFEQEVVKLMEDNMTTAMQYLQSKGLCLMPVALASAISAQKGTSSAAVRPEKK 488
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 136/179 (75%), Gaps = 12/179 (6%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
NG K RVRARRGQATDPHSIAERLRREKI++RMKNLQELVPNSN+TDKASMLDEII+YV
Sbjct: 291 NGAPKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYV 350
Query: 341 KFLQLQVKVLSMSRLGAAGAVLPLITDGQAEAS-KGLSLSPQADQGVDISLNS------- 392
KFLQLQVKVLSMSRLGA AV+PL+T Q E S GL LSP++ G
Sbjct: 351 KFLQLQVKVLSMSRLGATEAVVPLLTQSQTENSGGGLLLSPRSGSGRQQQARGGSLPPPS 410
Query: 393 ----DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEEN 447
D AFE+EV +LMES++T AMQYLQ+KGLCLMP+ALA+AIS K +SS + EN
Sbjct: 411 SEVRDGAAFEQEVAQLMESDMTTAMQYLQSKGLCLMPVALASAISGQKGASSAAVQPEN 469
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 118/165 (71%), Positives = 130/165 (78%), Gaps = 2/165 (1%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
AN G + K R RARRGQATDPHSIAERLRREKI+ERMKNLQ LVPNSNK DKASML
Sbjct: 225 ANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASML 284
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQA-DQG-VDISLN 391
DEIIDYVKFLQLQVKVLSMSRLGA GAVLPL+ + Q E SLS QG D+ +
Sbjct: 285 DEIIDYVKFLQLQVKVLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDS 344
Query: 392 SDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGK 436
D AFE+EVVKLME+++ AMQYLQNKGLCLMPIALA+AIS+ K
Sbjct: 345 EDSSAFEQEVVKLMETSIISAMQYLQNKGLCLMPIALASAISNQK 389
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 130/175 (74%), Gaps = 12/175 (6%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
KARVRARRGQATDPHSIAERLRREKI++RMKNLQELVPNSNKTDKASML+EII+Y+KFLQ
Sbjct: 279 KARVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQ 338
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQAD------------QGVDISLNS 392
LQ KVLSMSRLGA A++PL+ D E+S + SP++ Q
Sbjct: 339 LQTKVLSMSRLGATDALVPLLMDSHNESSGLVMGSPKSGAAAGGKGHAGHRQTDSDDFVE 398
Query: 393 DQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEEN 447
D++ E+EV ++ME N+T AMQYLQN+GLCLMPI LA+AIS K + S T+ EN
Sbjct: 399 DKVVLEQEVAQMMEDNMTMAMQYLQNRGLCLMPITLASAISVQKGTFSATVRPEN 453
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 122/150 (81%), Gaps = 8/150 (5%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEI+DYVKFLQ
Sbjct: 237 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQ 296
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG A AV PL+ D +E G++++ +D G+ ++ E++V KL
Sbjct: 297 LQVKVLSMSRLGGAAAVAPLVADMSSEGRGGVAVAAGSDDGLAVT--------EQQVAKL 348
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISS 434
ME ++ AMQYLQ KGLCLMP++LA+AISS
Sbjct: 349 MEEDMGTAMQYLQGKGLCLMPVSLASAISS 378
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 122/150 (81%), Gaps = 8/150 (5%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEI+DYVKFLQ
Sbjct: 236 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQ 295
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG A AV PL+ D +E G++++ +D G+ ++ E++V KL
Sbjct: 296 LQVKVLSMSRLGGAAAVAPLVADMSSEGRGGVAVAAGSDDGLAVT--------EQQVAKL 347
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISS 434
ME ++ AMQYLQ KGLCLMP++LA+AISS
Sbjct: 348 MEEDMGTAMQYLQGKGLCLMPVSLASAISS 377
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 128/177 (72%), Gaps = 11/177 (6%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
+ Q ++ GG + RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKT
Sbjct: 17 MNQPQASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 76
Query: 328 DKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQG-V 386
DKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ D +EA G + AD G +
Sbjct: 77 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEAG-GDCIQASADGGSL 135
Query: 387 DISLNSDQIA---------FEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISS 434
+ N +Q A E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 136 SRTSNGNQTARTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAIST 192
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 142/213 (66%), Gaps = 16/213 (7%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
+ Q ++ TGG + RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKT
Sbjct: 236 MNQPQASGSTGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 295
Query: 328 DKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEA------------SKG 375
DKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ D +E +
Sbjct: 296 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDCIQANANGAAGN 355
Query: 376 LSLSPQADQGVDISLNSDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISS 434
SL P+A+ ++D + E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 356 GSL-PRANNSSQTPSSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAIST 414
Query: 435 GKASSSDTISEENKFCFSNGLVQSNSSSASSNS 467
+ +T + N + L+QSN SS S
Sbjct: 415 ATCHNRNTTT--NSLLNPSRLLQSNGEGPSSPS 445
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 110/163 (67%), Positives = 126/163 (77%), Gaps = 12/163 (7%)
Query: 272 ASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKAS 331
ASA GG +G K RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKAS
Sbjct: 181 ASAPANGGGSGQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS 240
Query: 332 MLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLN 391
MLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ +G + QA + S +
Sbjct: 241 MLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAEGGGDCI-------QAKR----SNS 289
Query: 392 SDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAIS 433
+D +A E++V KLME ++ AMQYLQ KGLCLMPI+LA+AIS
Sbjct: 290 NDSLAMTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLASAIS 332
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 130/195 (66%), Gaps = 9/195 (4%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
+ QT + GG + RVRARRGQAT PHSIAERLRRE+IAERMK LQELVPN+NKT
Sbjct: 240 MNQTPATGSAGGAPAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKT 299
Query: 328 DKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEA------SKGLS--LS 379
DKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ D +E + G S
Sbjct: 300 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQASGTSGPTG 359
Query: 380 PQADQGVDISLNSDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKAS 438
+A G ++D + E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 360 GRATNGTQTXTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTTTCH 419
Query: 439 SSDTISEENKFCFSN 453
S + + SN
Sbjct: 420 SRNPMVAAAAVAASN 434
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/156 (69%), Positives = 126/156 (80%), Gaps = 4/156 (2%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
+ + RVRARRGQATDPHSIAERLRREKIAERMK LQELVPN+NKTDKASMLDEIIDYVKF
Sbjct: 131 SARPRVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKF 190
Query: 343 LQLQVKVLSMSRLGAAGAVL-PLITDGQAE-ASKGLSLSPQADQGVDISLN-SDQIAF-E 398
LQLQVKVLSMSRLG AGA + PL+ D E A + L S Q + + ++L+ D IA E
Sbjct: 191 LQLQVKVLSMSRLGGAGATMAPLVADLPLEGAGQELVSSSQLCRQISVNLSPQDGIALTE 250
Query: 399 EEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISS 434
+V +LME ++ AMQYLQ+KGLCLMPI+LAT+ISS
Sbjct: 251 HQVARLMEDDMGSAMQYLQSKGLCLMPISLATSISS 286
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 122/169 (72%), Gaps = 12/169 (7%)
Query: 276 PTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDE 335
P G + +VRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDE
Sbjct: 184 PASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDE 243
Query: 336 IIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDI------- 388
IIDYVKFLQ+QVKVLSMSRLG AGAV PL+ D +S+G+S Q + +
Sbjct: 244 IIDYVKFLQVQVKVLSMSRLGGAGAVAPLVAD---MSSEGVSDCVQTNGNGGVHPRNPKT 300
Query: 389 --SLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSG 435
S N E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 301 ASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 349
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 122/169 (72%), Gaps = 12/169 (7%)
Query: 276 PTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDE 335
P G + +VRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDE
Sbjct: 187 PASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDE 246
Query: 336 IIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDI------- 388
IIDYVKFLQ+QVKVLSMSRLG AGAV PL+ D +S+G+S Q + +
Sbjct: 247 IIDYVKFLQVQVKVLSMSRLGGAGAVAPLVAD---MSSEGVSDCVQTNGNGGVHPRNPKT 303
Query: 389 --SLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSG 435
S N E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 304 ASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 352
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 115/151 (76%), Gaps = 6/151 (3%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEII YVKFLQ
Sbjct: 27 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQ 86
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG A AV PL+ D +E G + V S N E +VVKL
Sbjct: 87 LQVKVLSMSRLGGAAAVAPLVADISSEVRNG------NNGTVTASTNDTLTVTEHQVVKL 140
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISSG 435
ME ++ AMQYLQ KGLCLMPI+LA+AIS+
Sbjct: 141 MEEDMGSAMQYLQGKGLCLMPISLASAISTA 171
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 123/184 (66%), Gaps = 16/184 (8%)
Query: 276 PTGGCNGTG----KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKAS 331
P GG G K +VRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKAS
Sbjct: 188 PGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKAS 247
Query: 332 MLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITD------------GQAEASKGLSLS 379
MLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ D A+A S +
Sbjct: 248 MLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNN 307
Query: 380 PQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
S N E++V KLME ++ AMQYLQ KGLCLMPI+LATAIS+ S
Sbjct: 308 NGNGGNQTASTNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHS 367
Query: 440 SDTI 443
+ +
Sbjct: 368 RNPL 371
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/162 (64%), Positives = 117/162 (72%), Gaps = 11/162 (6%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQ
Sbjct: 171 KPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLS-----------LSPQADQGVDISLNSD 393
LQVKVLSMSRLG A AV PL+ D +E G + P++ + N
Sbjct: 231 LQVKVLSMSRLGGAAAVAPLVADISSEGGGGGGGGDCVTNGAGGVLPRSTTTAASTTNDS 290
Query: 394 QIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSG 435
E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 291 LTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 332
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 126/181 (69%), Gaps = 28/181 (15%)
Query: 276 PTGGCNGTGKA-----------------RVRARRGQATDPHSIAERLRREKIAERMKNLQ 318
P GGC G+G A RVRARRGQATDPHSIAERLRRE+IAERMK LQ
Sbjct: 2 PPGGCQGSGYANPGVPAGQSLPGMGARPRVRARRGQATDPHSIAERLRRERIAERMKALQ 61
Query: 319 ELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVL----PLITDGQAEASK 374
ELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG AGA++ P AS
Sbjct: 62 ELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAGALVNSDPPAEGGNNFAASA 121
Query: 375 GLS-LSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAIS 433
G S +S A G+ +L E +V ++ME ++ AMQYLQ+KGLCLMPI+LATAIS
Sbjct: 122 GSSGVSNPAQDGLASALT------ERQVTRMMEDDMGAAMQYLQSKGLCLMPISLATAIS 175
Query: 434 S 434
+
Sbjct: 176 T 176
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 121/165 (73%), Gaps = 6/165 (3%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RVRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN+NKTDKASMLDEII+YV+FLQ
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQG------VDISLNSDQIAFE 398
LQVKVLSMSRLG AGAV P + AEA L+ G V S N + E
Sbjct: 156 LQVKVLSMSRLGGAGAVGPRLNGLSAEAGGRLNALTAPCNGLNGNGNVTGSSNESLRSTE 215
Query: 399 EEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTI 443
+ V KLME ++ AMQYLQ KGLCLMPI+LATAISS S ++
Sbjct: 216 QRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSL 260
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 132/191 (69%), Gaps = 23/191 (12%)
Query: 267 SLQQTASANPTGGCNGT------GKARVRARRGQATDPHSIAERLRREKIAERMKNLQEL 320
S Q + ANP G +G + RVRARRGQATDPHSIAERLRRE+IAERMK LQEL
Sbjct: 5 SAQGSGYANPGGVPSGQPLPGIGARPRVRARRGQATDPHSIAERLRRERIAERMKALQEL 64
Query: 321 VPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITD-------GQAEAS 373
VPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG AGA+ L+ + AS
Sbjct: 65 VPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAGALPSLVNNDLPSEGANTFAAS 124
Query: 374 KGLSLSPQADQGVDISLNSDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
G S P Q D +A E +V ++ME ++ AMQYLQ+KGLCLMPI+LATAI
Sbjct: 125 AGSSGIPNPAQ--------DGLALTERQVTRMMEDDMGSAMQYLQSKGLCLMPISLATAI 176
Query: 433 S-SGKASSSDT 442
S +GK S+ T
Sbjct: 177 STTGKGSAQAT 187
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 124/165 (75%), Gaps = 14/165 (8%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQ
Sbjct: 222 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 281
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAE-----------ASKGLSLSPQA--DQGVDISLN 391
LQVKVLSMSRLG A AV PL+ D +E ++ G + +P + +Q + +
Sbjct: 282 LQVKVLSMSRLGGAAAVAPLVADMYSEGGGDCIQANGNSNGGGAHAPNSNTNQTSATTPS 341
Query: 392 SDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSG 435
+D + E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 342 NDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 386
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 121/170 (71%), Gaps = 9/170 (5%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
+ QT + GG + RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKT
Sbjct: 84 MNQTPATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 143
Query: 328 DKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEA------SKGLS--LS 379
DKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ D +E + G S
Sbjct: 144 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQASGTSGPTG 203
Query: 380 PQADQGVDISLNSDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIAL 428
+A G + ++D + E +V KLME ++ AMQYLQ KGLCLMPI+L
Sbjct: 204 GRATNGTQTTTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 253
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 121/166 (72%), Gaps = 9/166 (5%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
G + RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVK
Sbjct: 211 GQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVK 270
Query: 342 FLQLQVKVLSMSRLGAAGAVLP-----LITDGQAEA--SKGLS-LSPQADQGVDISLNSD 393
FLQLQVKVLS+SRLG A A +P L T+G E S G + S Q G S N
Sbjct: 271 FLQLQVKVLSVSRLGGATAAMPSRLPDLSTEGGTECNQSNGTNGASGQTSTGAPSS-NDA 329
Query: 394 QIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
E +VVKLME ++ AMQYLQ KGLCLMPI+LATAIS+ S
Sbjct: 330 MTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHS 375
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 131/195 (67%), Gaps = 20/195 (10%)
Query: 255 RPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERM 314
+P TV T P ++Q K RVRARRGQATDPHSIAERLRRE+IAERM
Sbjct: 80 QPQGTVSTTSAPVVRQ--------------KPRVRARRGQATDPHSIAERLRRERIAERM 125
Query: 315 KNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASK 374
K+LQELVPN+NKTDKASMLDEII+YV+FLQLQVKVLSMSRLG AG+V P + AEA
Sbjct: 126 KSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGG 185
Query: 375 GLSLSPQADQGVD------ISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIAL 428
L+ G++ S N + E+ V KLME ++ AMQYLQ KGLCLMPI+L
Sbjct: 186 RLNALTAPCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISL 245
Query: 429 ATAISSGKASSSDTI 443
ATAISS S ++
Sbjct: 246 ATAISSSTTHSRGSL 260
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 118/161 (73%), Gaps = 6/161 (3%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP++NKTDKASMLDEIIDYVKFLQ
Sbjct: 141 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQ 200
Query: 345 LQVKVLSMSRLGAAGAVLPLIT------DGQAEASKGLSLSPQADQGVDISLNSDQIAFE 398
+QVKVLSMSRLG AGAV PL+ +G + + A D S A E
Sbjct: 201 VQVKVLSMSRLGGAGAVAPLVANMSPEDNGNGDGTSSSGWDGNAGNSDDNGGGSTLRATE 260
Query: 399 EEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
E+V +LME ++ AMQYLQ KGLCLMPI+LA+ ISS + S
Sbjct: 261 EQVSRLMEEDMGSAMQYLQGKGLCLMPISLASLISSATSPS 301
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 117/156 (75%), Gaps = 3/156 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ +VRARRGQATDPHSIAERLRRE+IAERMK LQELVPN NKTDKASMLDEIIDYVKFLQ
Sbjct: 135 RTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF-EEEVVK 403
LQVKVLSMSRLG A +V ++ +A S G + S A ++D I E +V K
Sbjct: 195 LQVKVLSMSRLGGAASVSSQLS--EAGGSHGNASSAMAGGSQTAGNSNDSITMTEHQVAK 252
Query: 404 LMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
LME ++ AMQYLQ KGLCLMPI+LATAIS+ S
Sbjct: 253 LMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHS 288
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 117/167 (70%), Gaps = 16/167 (9%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQ
Sbjct: 250 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 309
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQG---------------VDIS 389
LQVKVLSMSRLG A AV PL+ D +E + G +
Sbjct: 310 LQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGKSNGGGAQASTTNTNTNQTTATT 369
Query: 390 LNSDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSG 435
++D + E +V KLME ++ AMQYLQ KGLCLMPI+LATAIS+
Sbjct: 370 TSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 416
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 120/173 (69%), Gaps = 15/173 (8%)
Query: 269 QQTASANPTGGCNGT--GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
Q TASA TGG K +VRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN NK
Sbjct: 167 QATASAT-TGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK 225
Query: 327 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGV 386
TDKASMLDEIIDYVKFLQLQVKVLSMSRLG A + I++ + + S S +A
Sbjct: 226 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMT- 284
Query: 387 DISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
E +V KLME ++ AMQYLQ KGLCLMPI+LAT IS+ S
Sbjct: 285 -----------EHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPS 326
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 133/204 (65%), Gaps = 19/204 (9%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK- 326
+ QT + GG + RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NK
Sbjct: 265 MNQTPATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 324
Query: 327 -----TDKASMLDEIIDYVKFLQLQ---------VKVLSMSRLGAAGAVLPLITDGQAEA 372
TDKASMLDEIIDYVKFLQLQ V+VLSMSRLG A AV PL+ D +EA
Sbjct: 325 IHPTLTDKASMLDEIIDYVKFLQLQVKVFLTVVVVQVLSMSRLGGAAAVAPLVADMSSEA 384
Query: 373 SKGLS--LSPQADQGVDISLNSDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALA 429
S G S +A G + ++D + E +V KLME ++ AMQYLQ KGLCLMPI+LA
Sbjct: 385 S-GTSGPTGGRATNGTQTTTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLA 443
Query: 430 TAISSGKASSSDTISEENKFCFSN 453
TAIS+ S + + SN
Sbjct: 444 TAISTTTCHSRNPMVAAAAVAASN 467
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 120/173 (69%), Gaps = 15/173 (8%)
Query: 269 QQTASANPTGGCNGT--GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
Q TASA TGG K +VRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN NK
Sbjct: 110 QATASAT-TGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK 168
Query: 327 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGV 386
TDKASMLDEIIDYVKFLQLQVKVLSMSRLG A + I++ + + S S +A
Sbjct: 169 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKM-- 226
Query: 387 DISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
E +V KLME ++ AMQYLQ KGLCLMPI+LAT IS+ S
Sbjct: 227 ----------TEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPS 269
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 116/156 (74%), Gaps = 3/156 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ ++RARRGQATDPHSIAERLRRE+IAERMK LQELVPN NKTDKASMLDEIIDYVKFLQ
Sbjct: 135 RTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF-EEEVVK 403
LQVKVLSMSRLG A +V I+ +A S G + S ++D + E +V K
Sbjct: 195 LQVKVLSMSRLGGAASVSSQIS--EAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAK 252
Query: 404 LMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
LME ++ AMQYLQ KGLCLMPI+LATAIS+ S
Sbjct: 253 LMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHS 288
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 125/184 (67%), Gaps = 14/184 (7%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K +VRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN NKTDKASMLDEIIDYVKFLQ
Sbjct: 125 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 184
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG A +V I++ + + S S +A E +V KL
Sbjct: 185 LQVKVLSMSRLGGAASVSSQISEDAGGSHENTSSSGEAKMT------------EHQVAKL 232
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEENKFCFSNGLVQSNSSSAS 464
ME ++ AMQYLQ KGLCLMPI+LAT IS+ S + ++ S L S ++ A+
Sbjct: 233 MEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRNPFVKDTGVPLSPNL--STTTVAN 290
Query: 465 SNSS 468
N S
Sbjct: 291 GNGS 294
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 116/156 (74%), Gaps = 3/156 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ ++RARRGQATDPHSIAERLRRE+IAERMK LQELVPN NKTDKASMLDEIIDYV+FLQ
Sbjct: 135 RTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQ 194
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF-EEEVVK 403
LQVKVLSMSRLG A +V I+ +A S G + S ++D + E +V K
Sbjct: 195 LQVKVLSMSRLGGAASVSSQIS--EAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAK 252
Query: 404 LMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
LME ++ AMQYLQ KGLCLMPI+LATAIS+ S
Sbjct: 253 LMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHS 288
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 116/156 (74%), Gaps = 3/156 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ ++RARRGQATDPHSIAERLRRE+IAERMK LQELVPN NKTDKASMLDEIIDYVKFLQ
Sbjct: 135 RTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQ 194
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF-EEEVVK 403
LQVKVLSMSRLG A +V I+ +A S G + S ++D + E +V K
Sbjct: 195 LQVKVLSMSRLGGAASVSSQIS--EAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAK 252
Query: 404 LMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
LME ++ AMQYLQ +GLCLMPI+LATAIS+ S
Sbjct: 253 LMEEDMGSAMQYLQGEGLCLMPISLATAISTATCHS 288
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 119/173 (68%), Gaps = 15/173 (8%)
Query: 269 QQTASANPTGGCNGT--GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
Q TASA TGG K +VRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN NK
Sbjct: 110 QATASAT-TGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK 168
Query: 327 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGV 386
TDKASMLDEIIDYVKFLQLQVKVLSMSRLG A + I++ + + S S +A
Sbjct: 169 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKM-- 226
Query: 387 DISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASS 439
E + KLME ++ AMQYLQ KGLCLMPI+LAT IS+ S
Sbjct: 227 ----------TEHQXAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPS 269
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 122/176 (69%), Gaps = 12/176 (6%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
A A+ GG + RVRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN+NKTDKA
Sbjct: 166 AAPASSGGGAAPPRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKA 225
Query: 331 SMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISL 390
SMLDEIIDYVKFLQLQVKVLSMSRLG A + PL+ +EA+ + S +
Sbjct: 226 SMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMAPLVASMSSEANSSNTKSGSGAAAAAATA 285
Query: 391 NSDQIAF------------EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISS 434
N + E++V K+ME ++ AMQYLQ KGLCLMPI+LA+AISS
Sbjct: 286 NGNGNGGEKSGGGAGLRVTEQQVAKMMEEDMGTAMQYLQGKGLCLMPISLASAISS 341
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 117/164 (71%), Gaps = 13/164 (7%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQ
Sbjct: 156 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 215
Query: 345 LQVK----------VLSMSRLGAAGAVLPLITDGQAE--ASKGLSLSPQADQGVDISLNS 392
LQVK VLSMSRLG A AV PL+ D +E + A + S
Sbjct: 216 LQVKASTYTKLLIHVLSMSRLGGAAAVAPLVADMSSEGRGGGAANGGAPAAAAAAAAAGS 275
Query: 393 DQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSG 435
D + E++V KLME ++ AMQYLQ KGLCLMPI+LA+AISS
Sbjct: 276 DSLTVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPISLASAISSA 319
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP+SNKTD+A+MLDEI+DYVKFL+
Sbjct: 148 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLR 207
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D A +G + ++Q ++D E EV KL
Sbjct: 208 LQVKVLSMSRLGGAGAVAQLVADIPLPAVEGETGEGGSNQQAWDKWSND--GTEREVAKL 265
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTI 443
ME +V AMQ+LQ+K LC+MPI+LA AI + + T+
Sbjct: 266 MEEDVGAAMQFLQSKALCIMPISLAAAIYPAHQTDTPTL 304
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP+SNKTD+A+MLDEI+DYVKFL+
Sbjct: 172 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLR 231
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D A +G + ++Q ++D E EV KL
Sbjct: 232 LQVKVLSMSRLGGAGAVAQLVADIPLPAVEGETGEGGSNQQAWDKWSND--GTEREVAKL 289
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTI 443
ME +V AMQ+LQ+K LC+MPI+LA AI + + T+
Sbjct: 290 MEEDVGAAMQFLQSKALCIMPISLAAAIYPAHQTDTPTL 328
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 117/158 (74%), Gaps = 14/158 (8%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK---TDKASMLDEIIDYVK 341
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NK TDKASMLDEIIDYVK
Sbjct: 235 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVK 294
Query: 342 FLQLQVK----VLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF 397
FLQLQVK VLSMSRLG A AV PL+ D +E A G + SD +
Sbjct: 295 FLQLQVKASMHVLSMSRLGGAAAVAPLVADMSSEGRG------GAGNGGGPAAESDSLTV 348
Query: 398 -EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISS 434
E++V KLME ++ AMQYLQ KGLCLMP++LA+AISS
Sbjct: 349 TEQQVAKLMEEDMGAAMQYLQGKGLCLMPVSLASAISS 386
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 123/172 (71%), Gaps = 9/172 (5%)
Query: 268 LQQTASANPTGGCNGTG------KARVRARRGQATDPHSIAERLRREKIAERMKNLQELV 321
L Q PT G + RVRARRGQATDPHSIAERLRRE+IAERMK LQELV
Sbjct: 137 LHQPFHGQPTPGVVSAASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELV 196
Query: 322 PNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSL-SP 380
P +NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRLGAAGAV L+ D + +G S+
Sbjct: 197 PTANKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLASVEGESIDGA 256
Query: 381 QADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
A+Q ++D E++V KLME ++ AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 257 AANQQTWEKWSND--GTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAI 306
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 55 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLR 114
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D + +G + +Q +SD E++V KL
Sbjct: 115 LQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSD--GTEQQVAKL 172
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI 432
ME +V AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 173 MEEDVGAAMQFLQSKALCIMPISLASAI 200
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 154 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLR 213
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D + +G + +Q +SD E++V KL
Sbjct: 214 LQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSD--GTEQQVAKL 271
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI 432
ME +V AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 272 MEEDVGAAMQFLQSKALCIMPISLASAI 299
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 116/146 (79%), Gaps = 4/146 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQ+LVPN+NKTDKASMLDEI+DYVKFLQ
Sbjct: 1 RPRVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQ 60
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIA-FEEEVVK 403
LQVKVLSMSRLG+A AV L+ D +E + L L+ + IS D +A E +V +
Sbjct: 61 LQVKVLSMSRLGSAAAVPSLVADLPSEGANSL-LASTLSRSTGIS--HDGLASAERQVAR 117
Query: 404 LMESNVTKAMQYLQNKGLCLMPIALA 429
LM+ ++ AMQYLQ+KGLCLMPI+LA
Sbjct: 118 LMDEDMGSAMQYLQSKGLCLMPISLA 143
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 118/158 (74%), Gaps = 16/158 (10%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R RA+RGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQLQ
Sbjct: 187 RQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 246
Query: 347 VKVLSMSRLGAAGAVLPLIT----------DGQAEASKGLSLSPQADQGVDISLNSDQIA 396
VKVLSMSRLG A AV L+ DG +++ KG + + + G + +
Sbjct: 247 VKVLSMSRLGGATAVGTLVAGIASEGNGSGDGTSDSGKGNAANGENGGGGSLQVT----- 301
Query: 397 FEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISS 434
E++V +LME ++ AMQYLQ KGLCLMPI+LA+AISS
Sbjct: 302 -EQQVARLMEEDMGTAMQYLQGKGLCLMPISLASAISS 338
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 117/156 (75%), Gaps = 17/156 (10%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 166 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLR 225
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF------- 397
LQVKVLSMSRLG AGAV L+ D A +G DQ DI +++ A+
Sbjct: 226 LQVKVLSMSRLGGAGAVAQLVADVPLSAVEG-------DQ--DIEGGANEQAWDKWSNDG 276
Query: 398 -EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
E++V KLME +V AMQ+LQ+K LC+MPI LA+AI
Sbjct: 277 TEQQVAKLMEEDVGAAMQFLQSKALCIMPIPLASAI 312
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 119/165 (72%), Gaps = 18/165 (10%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK---TDKASMLDEIIDYVK 341
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NK TDKASMLDEIIDYVK
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVK 306
Query: 342 FLQLQVK----------VLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLN 391
FLQLQVK VLSMSRLG A AV PL+ D +E G + + G +
Sbjct: 307 FLQLQVKASTYTKLLIHVLSMSRLGGAAAVAPLVADMSSEGRGGGAAN----GGAPAAAG 362
Query: 392 SDQIAF-EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSG 435
SD + E++V KLME ++ AMQYLQ KGLCLMPI+LA+AISS
Sbjct: 363 SDSLTVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPISLASAISSA 407
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 123/164 (75%), Gaps = 3/164 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERM+ LQELVP+ NK+D+A+MLDEI+DYVKFL+
Sbjct: 177 RPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLR 236
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D A +G + A + ++D E++V KL
Sbjct: 237 LQVKVLSMSRLGGAGAVAQLVADVPLSAVEGEDIEGGASEQAWSKWSND--GTEQQVAKL 294
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI-SSGKASSSDTISEEN 447
ME +V AMQ+LQ+K LC+MPI+LA+AI ++ +S TI E+
Sbjct: 295 MEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSEASTTIKPES 338
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 116/148 (78%), Gaps = 2/148 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP++NKTD+A+MLDEI+DYVKFL+
Sbjct: 166 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLR 225
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D + +G ++Q ++D E++V KL
Sbjct: 226 LQVKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTD--GTEQQVAKL 283
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI 432
ME +V AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 284 MEEDVGAAMQFLQSKALCIMPISLASAI 311
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 116/148 (78%), Gaps = 2/148 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP++NKTD+A+MLDEI+DYVKFL+
Sbjct: 96 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLR 155
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D + +G ++Q ++D E++V KL
Sbjct: 156 LQVKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTD--GTEQQVAKL 213
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI 432
ME +V AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 214 MEEDVGAAMQFLQSKALCIMPISLASAI 241
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 122/181 (67%), Gaps = 15/181 (8%)
Query: 258 PTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNL 317
PT PT Q G + +VRARRGQATDPHSIAERLRRE+IAERM+ L
Sbjct: 103 PTPPTQVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRAL 162
Query: 318 QELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAV------LPLITDGQAE 371
QELVPN+NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV +PL G+A
Sbjct: 163 QELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAS 222
Query: 372 ASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATA 431
S G +Q + ++D E +V KLME ++ AMQ+LQ+K LC+MPI+LA A
Sbjct: 223 DSGG-------NQQIWEKWSTD--GTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMA 273
Query: 432 I 432
I
Sbjct: 274 I 274
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 118/156 (75%), Gaps = 17/156 (10%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 163 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLR 222
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF------- 397
LQVKVLSMSRLG AGAV L+ D A +G DQ DI S++ A+
Sbjct: 223 LQVKVLSMSRLGGAGAVAQLVADVPLSAVEG-------DQ--DIEGVSNEQAWDKWSNDG 273
Query: 398 -EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
E++V KLME +V AMQ+LQ+K LC+MPI+LA++I
Sbjct: 274 TEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASSI 309
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 122/181 (67%), Gaps = 15/181 (8%)
Query: 258 PTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNL 317
PT PT Q G + +VRARRGQATDPHSIAERLRRE+IAERM+ L
Sbjct: 103 PTPPTQVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRAL 162
Query: 318 QELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAV------LPLITDGQAE 371
QELVPN+NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV +PL G+A
Sbjct: 163 QELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAS 222
Query: 372 ASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATA 431
S G +Q + ++D E +V KLME ++ AMQ+LQ+K LC+MPI+LA A
Sbjct: 223 DSGG-------NQQIWEKWSTD--GTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMA 273
Query: 432 I 432
I
Sbjct: 274 I 274
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 9/178 (5%)
Query: 261 PTVGLPSLQQTASANPTGGCNGTG------KARVRARRGQATDPHSIAERLRREKIAERM 314
P + P Q A P G G + +VRARRGQATDPHSIAERLRRE+IAERM
Sbjct: 82 PHLRGPPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERM 141
Query: 315 KNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASK 374
+ LQELVPN+NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV L+ D K
Sbjct: 142 RALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSV-K 200
Query: 375 GLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
G + + Q + ++D E++V KLME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 201 GEASDSGSTQHIWEKWSTD--GTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAI 256
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 121/179 (67%), Gaps = 15/179 (8%)
Query: 266 PSLQQTASANPTGGCNGTG------KARVRARRGQATDPHSIAERLRREKIAERMKNLQE 319
P Q A P G G + +VRARRGQATDPHSIAERLRRE+IAERM+ LQE
Sbjct: 88 PPPPQMFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQE 147
Query: 320 LVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAV------LPLITDGQAEAS 373
LVPN+NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV +PL G+A
Sbjct: 148 LVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDG 207
Query: 374 KGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
G +PQ Q + E++V KLME ++ AMQ+LQ+K LC+MP++LA AI
Sbjct: 208 GG---APQQQQQQHVWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPVSLAMAI 263
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRR +I ER+K LQELVP NKTD+A+MLDEI+DYVKFL+
Sbjct: 13 RPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLR 72
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQ+KVLSMSRLGAAGAV L+ D + KG A+Q + ++D E+EV KL
Sbjct: 73 LQIKVLSMSRLGAAGAVAQLVADVPLSSIKGEGNEGGANQQSWENWSNDDT--EQEVAKL 130
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTI 443
ME +V AMQ+LQ+K LC+MPI+LA+AI + ++ T+
Sbjct: 131 MEEDVGAAMQFLQSKALCIMPISLASAIFRARPPNASTL 169
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 121/173 (69%), Gaps = 9/173 (5%)
Query: 266 PSLQQTASANPTGGCNGTG------KARVRARRGQATDPHSIAERLRREKIAERMKNLQE 319
P Q + P G G G + +VRARRGQATDPHSIAERLRRE+IAERM+ LQE
Sbjct: 94 PPTQVFRAQQPKQGGAGVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQE 153
Query: 320 LVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLS 379
LVPN+NKTD+A MLDEI+DYVKFL+LQVKVLSMSRLG AGAV L+ D + KG +
Sbjct: 154 LVPNTNKTDRAVMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVAD-IPLSVKGEASD 212
Query: 380 PQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
+ Q + ++D E +V KLME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 213 SGSKQQIWEKWSTD--GTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAI 263
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRR +I ER+K LQELVP NKTD+A+MLDEI+DYVKFL+
Sbjct: 17 RPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLR 76
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLGAAGAV L+ D + +G + A+Q + ++D E+EV KL
Sbjct: 77 LQVKVLSMSRLGAAGAVAQLVADVPLSSVQGEGIEGGANQQAWENWSND--GTEQEVAKL 134
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTI 443
ME +V AMQ LQ+K LC+MP++LA+AI + ++ T+
Sbjct: 135 MEEDVGAAMQLLQSKALCIMPVSLASAIFRARPPNAPTL 173
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/150 (64%), Positives = 113/150 (75%), Gaps = 8/150 (5%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ R RA RGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQ
Sbjct: 236 RQRERAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 295
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQ VLSMSRLG A AV PL+ D +E G + A +++ E++V KL
Sbjct: 296 LQ--VLSMSRLGGAAAVAPLVADMSSEGRGGAGAAAAAGSDGGLAVT------EQQVAKL 347
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISS 434
ME ++ AMQYLQ KGLCLMP++LA+AISS
Sbjct: 348 MEEDMGTAMQYLQGKGLCLMPVSLASAISS 377
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/148 (62%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ +VRARRGQATDPHSIAERLRRE+IAERM+ LQELVPN+NKTD+A+MLDEI+DYVKFL+
Sbjct: 121 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 180
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D + KG + + Q + ++D E +V KL
Sbjct: 181 LQVKVLSMSRLGGAGAVAQLVAD-IPLSVKGEASDSGSKQQIWEKWSTD--GTERQVAKL 237
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI 432
ME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 238 MEEDIGAAMQFLQSKALCMMPISLAMAI 265
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 122/181 (67%), Gaps = 15/181 (8%)
Query: 258 PTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNL 317
PT PT Q G + +VRARRGQATDPHSIAERLRRE+IAERM+ L
Sbjct: 103 PTPPTQVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRAL 162
Query: 318 QELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAV------LPLITDGQAE 371
QELVPN+NKTD+A+MLDEI+DYVKFL+LQVKVLS+SRLG AGAV +PL G+A
Sbjct: 163 QELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSISRLGGAGAVAQLVADIPLSVKGEAS 222
Query: 372 ASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATA 431
S G +Q + ++D E +V KLME ++ AMQ+LQ+K LC+MPI+LA A
Sbjct: 223 DSGG-------NQQIWEKWSTD--GTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMA 273
Query: 432 I 432
I
Sbjct: 274 I 274
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ +VRARRGQATDPHSIAERLRRE+IAERM+ LQ+LVPN+NKTD+A+MLDEI+DYVKFL+
Sbjct: 178 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 237
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D KG + + Q + ++D E++V KL
Sbjct: 238 LQVKVLSMSRLGGAGAVAQLVADIPISV-KGEASDSGSKQQIWEKWSTD--GTEKQVAKL 294
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI 432
ME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 295 MEEDIGAAMQFLQSKALCMMPISLAMAI 322
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 116/149 (77%), Gaps = 4/149 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+I+ER+K LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 138 RPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLR 197
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGV-DISLNSDQIAFEEEVVK 403
LQVKVLSMSRLG A AV L+ D ++ +G S +++Q + D N D E+EV K
Sbjct: 198 LQVKVLSMSRLGGASAVAQLVADIPLQSVEGDSGESRSNQRIWDKWSNVDT---EQEVAK 254
Query: 404 LMESNVTKAMQYLQNKGLCLMPIALATAI 432
LME +V AMQYLQ+K LC+MPI+LA I
Sbjct: 255 LMEEDVGAAMQYLQSKSLCIMPISLAALI 283
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 115/149 (77%), Gaps = 4/149 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+I+ER+K LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 139 RPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLR 198
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGV-DISLNSDQIAFEEEVVK 403
LQVKVLSMSRLG A AV L+ D ++ +G S +++Q + D N D E EV K
Sbjct: 199 LQVKVLSMSRLGGASAVAQLVADIPLQSVEGDSGESRSNQHIWDKWSNVDT---EREVAK 255
Query: 404 LMESNVTKAMQYLQNKGLCLMPIALATAI 432
LME +V AMQYLQ+K LC+MPI+LA I
Sbjct: 256 LMEEDVGAAMQYLQSKSLCIMPISLAALI 284
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 115/152 (75%), Gaps = 5/152 (3%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ +VRARRGQATDPHSIAERLRRE+IAERM+ LQELVPN+NKTD+A+MLDEI+DYVKFL+
Sbjct: 21 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 80
Query: 345 LQVKVLSMSRLGAAGAVLPLITD----GQAEASKGLSLSPQADQGVDISLNSDQIAFEEE 400
LQVKVLSMSRLG AGAV L+ D + EA G +PQ Q + E++
Sbjct: 81 LQVKVLSMSRLGGAGAVAQLVADIPLSVKGEAGDG-GGAPQQQQQQHVWEKWSTDGTEKQ 139
Query: 401 VVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
V KLME ++ AMQ+LQ+K LC+MP++LA AI
Sbjct: 140 VAKLMEEDIGAAMQFLQSKALCMMPVSLAMAI 171
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ +VRARRGQATDPHSIAERLRRE+IAERM+ LQ+LVPN+NKTD+A+MLDEI+DYVKFL+
Sbjct: 129 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 188
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQVKVLSMSRLG AGAV L+ D KG + + Q + ++D E++V KL
Sbjct: 189 LQVKVLSMSRLGGAGAVAQLVADIPISV-KGEASDSGSKQQIWEKWSTD--GTEKQVAKL 245
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAI 432
ME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 246 MEEDIGAAMQFLQSKALCMMPISLAMAI 273
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 115/155 (74%), Gaps = 16/155 (10%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ + RARRGQATDPHSIAERLRRE+IAERM+ LQELVPN+NKTD+A+MLDEI+DYVKFL+
Sbjct: 123 RPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 182
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQI-------AF 397
LQVKVLSMSRLG AGAV LI D + LS + ++ D S QI
Sbjct: 183 LQVKVLSMSRLGGAGAVAQLIAD--------IPLSVKGEEASD-SGGKQQIWEKWSTDGT 233
Query: 398 EEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
E++V KLME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 234 EKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAI 268
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 108/142 (76%), Gaps = 10/142 (7%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
GQATDPHSIAERLRRE+IAERMK+LQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
Query: 353 SRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF-EEEVVKLMESNVTK 411
SRLG AGAV+ TD E S L+ G D IA E +V KLME ++
Sbjct: 324 SRLGNAGAVM---TDLPPEDSNQF-LAALGQNGAQ-----DGIALTERQVAKLMEEDMGS 374
Query: 412 AMQYLQNKGLCLMPIALATAIS 433
AMQYLQNKGLCLMPI LA+ +S
Sbjct: 375 AMQYLQNKGLCLMPIHLASNMS 396
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 108/142 (76%), Gaps = 10/142 (7%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
GQATDPHSIAERLRRE+IAERMK+LQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
Query: 353 SRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAF-EEEVVKLMESNVTK 411
SRLG AGAV+ TD E S L+ G D IA E +V KLME ++
Sbjct: 324 SRLGNAGAVM---TDLPPEDSNQF-LAALGQNGAQ-----DGIALTERQVAKLMEEDMGS 374
Query: 412 AMQYLQNKGLCLMPIALATAIS 433
AMQYLQNKGLCLMPI LA+ +S
Sbjct: 375 AMQYLQNKGLCLMPIHLASNMS 396
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 113/146 (77%), Gaps = 2/146 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
RVRARRGQATDPHSIAERLRRE+I+ER+K LQELVPN NKTD+A+++DEI+DYVKFL+LQ
Sbjct: 133 RVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRLQ 192
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLME 406
VKVLSMSRLG AV L+TD ++ +G S +++Q V + + E+EV KLM
Sbjct: 193 VKVLSMSRLGGTSAVAQLVTDIPLQSVEGDSCESRSNQHVWEKWSDSET--EQEVAKLMG 250
Query: 407 SNVTKAMQYLQNKGLCLMPIALATAI 432
+V AMQYLQ+K LC+MP++LA I
Sbjct: 251 EDVGTAMQYLQSKSLCIMPVSLAALI 276
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 107/139 (76%), Gaps = 2/139 (1%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
GQATDPHSIAERLRRE+IAERMK LQELVP++NKTDKASMLDEIIDYVKFLQLQVKVLSM
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSM 228
Query: 353 SRLGAAGAVLPLITDGQAEAS-KGLSLSPQAD-QGVDISLNSDQIAFEEEVVKLMESNVT 410
SRLG A AV PL +E+S G S D G D + S A E++V +LME ++
Sbjct: 229 SRLGGAAAVGPLAAGLSSESSGNGNGTSSSGDGNGEDNNGGSTLWATEQQVARLMEEDMG 288
Query: 411 KAMQYLQNKGLCLMPIALA 429
AMQYLQ KGLCLMPI+LA
Sbjct: 289 TAMQYLQGKGLCLMPISLA 307
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 104/142 (73%), Gaps = 3/142 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R RA+RGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQLQ
Sbjct: 194 RQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 253
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAEA---SKGLSLSPQADQGVDISLNSDQIAFEEEVVK 403
VKVLSMSRLG A AV PL+ +E G S S + + E++V +
Sbjct: 254 VKVLSMSRLGGATAVGPLVASMASEGNGNGNGTSDSGNGNAANGENGGGSLQVTEQQVAR 313
Query: 404 LMESNVTKAMQYLQNKGLCLMP 425
LME ++ AMQYLQ KGLCLMP
Sbjct: 314 LMEEDMGTAMQYLQGKGLCLMP 335
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 138/207 (66%), Gaps = 32/207 (15%)
Query: 245 PNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAER 304
P + L F +P+PT +P+ Q + P RVRARRGQATDPHSIAER
Sbjct: 94 PKNFLQTFHGQPMPTT----VPAAPQPPAMRP----------RVRARRGQATDPHSIAER 139
Query: 305 LRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPL 364
LRRE+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL
Sbjct: 140 LRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPL 199
Query: 365 ITDGQAEASKGLSLSPQADQGVDISLNSDQIAF--------EEEVVKLMESNVTKAMQYL 416
+TD + LS ++G D N Q A+ E++V KLME NV AMQ+L
Sbjct: 200 VTD--------IPLSSVEEEGSDSGRN--QPAWEKWSNDGTEKQVAKLMEENVGAAMQFL 249
Query: 417 QNKGLCLMPIALATAISSGKASSSDTI 443
Q+K LC+MPI+LA+AI + S + +I
Sbjct: 250 QSKALCIMPISLASAIYQSQPSDNSSI 276
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 137/204 (67%), Gaps = 32/204 (15%)
Query: 248 PLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRR 307
P + F +P+PT +P+ Q + P RVRARRGQATDPHSIAERLRR
Sbjct: 94 PKNTFHGQPMPTT----VPAAPQPPAMRP----------RVRARRGQATDPHSIAERLRR 139
Query: 308 EKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITD 367
E+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL+TD
Sbjct: 140 ERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD 199
Query: 368 GQAEASKGLSLSPQADQGVDISLNSDQIAF--------EEEVVKLMESNVTKAMQYLQNK 419
+ LS ++G D N Q A+ E++V KLME NV AMQ+LQ+K
Sbjct: 200 --------IPLSSVEEEGSDSGRN--QPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSK 249
Query: 420 GLCLMPIALATAISSGKASSSDTI 443
LC+MPI+LA+AI + S + +I
Sbjct: 250 ALCIMPISLASAIYQSQPSDNSSI 273
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 136/201 (67%), Gaps = 32/201 (15%)
Query: 251 CFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKI 310
F +P+PT TV TA+ +P + RVRARRGQATDPHSIAERLRRE+I
Sbjct: 115 VFHGQPMPT--TV-------TAATHPP-----AMRPRVRARRGQATDPHSIAERLRRERI 160
Query: 311 AERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQA 370
AER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVK+LSMSRLG AGAV PL+TD
Sbjct: 161 AERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKILSMSRLGGAGAVAPLVTD--- 217
Query: 371 EASKGLSLSPQADQGVDISLNSDQIAFEE--------EVVKLMESNVTKAMQYLQNKGLC 422
+ LSP D+ + N Q+A+E+ +V KLME NV AMQ+LQ+K LC
Sbjct: 218 -----IPLSPVEDETGEGGRN--QLAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALC 270
Query: 423 LMPIALATAISSGKASSSDTI 443
+MPI LATAI + + TI
Sbjct: 271 IMPITLATAIYHTQPPDTTTI 291
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 134/201 (66%), Gaps = 32/201 (15%)
Query: 251 CFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKI 310
F +P+PT A+ +P T + RVRARRGQATDPHSIAERLRRE+I
Sbjct: 114 VFHGQPMPTT---------MAAAPHPP-----TMRPRVRARRGQATDPHSIAERLRRERI 159
Query: 311 AERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQA 370
AER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL+TD
Sbjct: 160 AERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD--- 216
Query: 371 EASKGLSLSPQADQGVDISLNSDQIAFEE--------EVVKLMESNVTKAMQYLQNKGLC 422
+ LS D+ + N Q A+E+ +V KLME NV AMQ+LQ+K LC
Sbjct: 217 -----IPLSSVEDETGEGGRN--QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALC 269
Query: 423 LMPIALATAISSGKASSSDTI 443
+MPI+LATAI +A + TI
Sbjct: 270 IMPISLATAIYHTQAPDTSTI 290
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 105/144 (72%), Gaps = 3/144 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ R RA+RGQATDPHSIAERLRRE+IAERMK+LQELVPN+NKTDKASMLDEIIDYV+FLQ
Sbjct: 191 RQRQRAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQ 250
Query: 345 LQVKVLSMSRL-GAAGAVLPLITDGQAEASKGLSLSPQADQGVDI-SLNSDQIAF-EEEV 401
LQVKVLSMSRL GAAG + PL+ + K + S N + E +V
Sbjct: 251 LQVKVLSMSRLGGAAGGMAPLVASMASSEGKSNGSGGGGNTNATTKSGNGGGLRVAEHQV 310
Query: 402 VKLMESNVTKAMQYLQNKGLCLMP 425
K+ME ++ AMQYLQ KGLCLMP
Sbjct: 311 AKMMEEDMGTAMQYLQGKGLCLMP 334
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 151/247 (61%), Gaps = 27/247 (10%)
Query: 203 YLQGATMNHDVDTTG-NRYVGMDKILQFDYLSASIVAKGEQELPNHPLSCFSSRPLPTVP 261
+L GA+ + V G + G + ++ D SAS + + N F +P+PT
Sbjct: 58 HLAGASFHAPVYQLGLSLEQGKGRFMKPDEASASGKRFRDDVVDNRAKHVFHGQPMPTT- 116
Query: 262 TVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELV 321
+P+ + P RVRARRGQATDPHSIAERLRRE+IAER++ LQELV
Sbjct: 117 ---MPAAPHPPAIRP----------RVRARRGQATDPHSIAERLRRERIAERIRALQELV 163
Query: 322 PNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITD-----GQAEASKGL 376
P+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL+TD + E +G
Sbjct: 164 PSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGA 223
Query: 377 SLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGK 436
P D+ ++D E +V KLME NV AMQ+LQ+K LC+MPI+LA+AI +
Sbjct: 224 RNRPAWDK-----WSND--GTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQ 276
Query: 437 ASSSDTI 443
+ +I
Sbjct: 277 PPDTSSI 283
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 105/164 (64%), Gaps = 16/164 (9%)
Query: 278 GGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEII 337
GG + RVRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN+NKTDKASMLDEII
Sbjct: 194 GGTAPPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEII 253
Query: 338 DYVKFLQLQVKVLSMSRLGAAGAVLPLITD----------------GQAEASKGLSLSPQ 381
DYVKFLQLQVKVLSMSRLG A + PL+ ++ G
Sbjct: 254 DYVKFLQLQVKVLSMSRLGGAAGMAPLVASMSSEGNSNGSSNGGGGKASKGGTGGEGGGG 313
Query: 382 ADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMP 425
G E++V K+ME ++ AMQYLQ KGLCLMP
Sbjct: 314 GGGGGGGGTGGGMRVTEQQVAKMMEEDMGTAMQYLQGKGLCLMP 357
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 105/164 (64%), Gaps = 16/164 (9%)
Query: 278 GGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEII 337
GG + RVRARRGQATDPHSIAERLRRE+IAERMK+LQELVPN+NKTDKASMLDEII
Sbjct: 194 GGTAPPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEII 253
Query: 338 DYVKFLQLQVKVLSMSRLGAAGAVLPLITD----------------GQAEASKGLSLSPQ 381
DYVKFLQLQVKVLSMSRLG A + PL+ ++ G
Sbjct: 254 DYVKFLQLQVKVLSMSRLGGAAGMAPLVASMSSEGNSNGSSNGSGGKASKGGTGGEGGGG 313
Query: 382 ADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMP 425
G E++V K+ME ++ AMQYLQ KGLCLMP
Sbjct: 314 GGGGGGGGTGGGMRVTEQQVAKMMEEDMGTAMQYLQGKGLCLMP 357
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 133/203 (65%), Gaps = 26/203 (12%)
Query: 246 NHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERL 305
N + F +P+PT +P+ + P RVRARRGQATDPHSIAERL
Sbjct: 102 NRAKNVFHGQPMPTT----MPAAPHPPAIRP----------RVRARRGQATDPHSIAERL 147
Query: 306 RREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLI 365
RRE+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL+
Sbjct: 148 RRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV 207
Query: 366 TD-----GQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKG 420
TD + E +G P D+ ++D E +V KLME NV AMQ+LQ+K
Sbjct: 208 TDIPLSSVEEEGGEGARNRPAWDK-----WSND--GTERQVAKLMEENVGAAMQFLQSKA 260
Query: 421 LCLMPIALATAISSGKASSSDTI 443
LC+MPI+LA+AI + + +I
Sbjct: 261 LCIMPISLASAIYQSQPPDTSSI 283
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 118/153 (77%), Gaps = 12/153 (7%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 151 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 210
Query: 345 LQVKVLSMSRLGAAGAVLPLITD-----GQAEASKGLSLSPQADQGVDISLNSDQIAFEE 399
LQVKVLSMSRLG AGAV PL+TD + E S+G P D+ ++D E
Sbjct: 211 LQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWDK-----WSND--GTER 263
Query: 400 EVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
+V KLME NV AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 264 QVAKLMEENVGAAMQFLQSKALCIMPISLASAI 296
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 118/153 (77%), Gaps = 12/153 (7%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 132 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 191
Query: 345 LQVKVLSMSRLGAAGAVLPLITD-----GQAEASKGLSLSPQADQGVDISLNSDQIAFEE 399
LQVKVLSMSRLG AGAV PL+TD + E +G P D+ ++D E+
Sbjct: 192 LQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGARNRPAWDK-----WSND--GTEK 244
Query: 400 EVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
+V KLME NV AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 245 QVAKLMEENVGAAMQFLQSKALCIMPISLASAI 277
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 108/150 (72%), Gaps = 19/150 (12%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELV N+NKTDKASMLDEIIDYVKFLQ
Sbjct: 142 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQ 201
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQ VLSMSRLG G A + +G + A +++ E++V KL
Sbjct: 202 LQ--VLSMSRLG-----------GAARSRQGRDGAAAAAGSDGLAVT------EQQVAKL 242
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISS 434
ME ++ AMQYLQ KGLCLMP++LA AISS
Sbjct: 243 MEEDMGTAMQYLQGKGLCLMPVSLAAAISS 272
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 108/150 (72%), Gaps = 19/150 (12%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELV N+NKTDKASMLDEIIDYVKFLQ
Sbjct: 114 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQ 173
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKL 404
LQ VLSMSRLG G A + +G + A +++ E++V KL
Sbjct: 174 LQ--VLSMSRLG-----------GAARSRQGRDGAAAAAGSDGLAVT------EQQVAKL 214
Query: 405 MESNVTKAMQYLQNKGLCLMPIALATAISS 434
ME ++ AMQYLQ KGLCLMP++LA AISS
Sbjct: 215 MEEDMGTAMQYLQGKGLCLMPVSLAAAISS 244
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 119/153 (77%), Gaps = 12/153 (7%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 124 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 183
Query: 345 LQVKVLSMSRLGAAGAVLPLITD-----GQAEASKGLSLSPQADQGVDISLNSDQIAFEE 399
LQVKVLSMSRLG AGAV PL+TD + EAS+G P ++ ++D E
Sbjct: 184 LQVKVLSMSRLGGAGAVAPLVTDIPLASVEEEASEGGRNEPAWEK-----WSND--GTER 236
Query: 400 EVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
+V KLME NV AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 237 QVAKLMEENVGAAMQFLQSKALCIMPISLASAI 269
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 119/172 (69%), Gaps = 17/172 (9%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP NKTD+A+M+DEI+DYVKFL+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEE----- 399
LQVKVLSMSRLG AGAV PL+TD + LS + + Q A+E+
Sbjct: 203 LQVKVLSMSRLGGAGAVAPLVTD--------MPLSSSVEDETGEGGRTPQPAWEKWSNDG 254
Query: 400 ---EVVKLMESNVTKAMQYLQNKGLCLMPIALATAI-SSGKASSSDTISEEN 447
+V KLME NV AMQ LQ+K LC+MPI+LA AI S +S + EN
Sbjct: 255 TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPEN 306
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 117/167 (70%), Gaps = 16/167 (9%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP NKTD+A+M+DEI+DYVKFL+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEE----- 399
LQVKVLSMSRLG AGAV PL+TD + LS + + Q A+E+
Sbjct: 203 LQVKVLSMSRLGGAGAVAPLVTD--------MPLSSSVEDETSDGGRTPQPAWEKWSNDG 254
Query: 400 ---EVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTI 443
+V KLME NV AMQ LQ+K LC+MPI+LA AI + + ++
Sbjct: 255 TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAICHSQPPDTSSV 301
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 119/172 (69%), Gaps = 17/172 (9%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP NKTD+A+M+DEI+DYVKFL+
Sbjct: 80 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 139
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEE----- 399
LQVKVLSMSRLG AGAV PL+TD + LS + + Q A+E+
Sbjct: 140 LQVKVLSMSRLGGAGAVAPLVTD--------MPLSSSVEDETGEGGRTPQPAWEKWSNDG 191
Query: 400 ---EVVKLMESNVTKAMQYLQNKGLCLMPIALATAI-SSGKASSSDTISEEN 447
+V KLME NV AMQ LQ+K LC+MPI+LA AI S +S + EN
Sbjct: 192 TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPEN 243
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 118/172 (68%), Gaps = 17/172 (9%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP NKTD+A+M+DEI+DYVKFL+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEE----- 399
LQVKVLSMSRLG AGAV PL+TD + LS + Q A+E+
Sbjct: 203 LQVKVLSMSRLGGAGAVAPLVTD--------MPLSSSVXDETGEGGRTPQPAWEKWSNDG 254
Query: 400 ---EVVKLMESNVTKAMQYLQNKGLCLMPIALATAI-SSGKASSSDTISEEN 447
+V KLME NV AMQ LQ+K LC+MPI+LA AI S +S + EN
Sbjct: 255 TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPEN 306
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 117/167 (70%), Gaps = 16/167 (9%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP NKTD+A+M+DEI+DYVKFL+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEE----- 399
LQVKVLSMSRLG AGAV PL+TD + LS + + Q A+E+
Sbjct: 203 LQVKVLSMSRLGGAGAVAPLVTD--------MPLSSSVEDETGDGGRTPQPAWEKWSNDG 254
Query: 400 ---EVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTI 443
+V KLME NV AMQ LQ+K LC+MPI+LA AI + + ++
Sbjct: 255 TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSV 301
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 115/159 (72%), Gaps = 7/159 (4%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
A P T + RVRARRGQATDPHSIAERLRRE+IAER+++LQELVP NKTD+A+M+
Sbjct: 125 APPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMI 184
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSD 393
DEI+DYVKFL+LQVKVLSMSRLG AGAV PL+T+ +S Q V ++D
Sbjct: 185 DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE-----DETQAVWEKWSND 239
Query: 394 QIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
E +V KLME NV AMQ LQ+K LC+MPI+LA AI
Sbjct: 240 --GTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAI 276
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 115/159 (72%), Gaps = 7/159 (4%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
A P T + RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP NKTD+A+M+
Sbjct: 134 APPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMI 193
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSD 393
DEI+DYVKFL+LQVKVLSMSRLG AGAV PL+T+ +S + Q V ++D
Sbjct: 194 DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSS-----TEDETQAVWEKWSND 248
Query: 394 QIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
E +V KLME NV AMQ LQ+K LC+MPI+LA AI
Sbjct: 249 --GTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAI 285
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 88/107 (82%), Gaps = 5/107 (4%)
Query: 266 PSLQQTASANPTGGCNGTGKA-----RVRARRGQATDPHSIAERLRREKIAERMKNLQEL 320
P++ QT +A+ + G T A RVRARRGQATDPHSIAERLRRE+IAERMK LQEL
Sbjct: 220 PAMNQTPAASGSAGGGTTPAAQPKQQRVRARRGQATDPHSIAERLRRERIAERMKALQEL 279
Query: 321 VPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITD 367
VPN+NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ D
Sbjct: 280 VPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVAD 326
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 118/172 (68%), Gaps = 17/172 (9%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP NKTD+A+M+DEI+DYVKFL+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEE----- 399
LQVKVLSMSRLG GAV PL+TD + LS + + Q A+E+
Sbjct: 203 LQVKVLSMSRLGGVGAVAPLVTD--------MPLSSSVEDETGEGGRTPQPAWEKWSNDG 254
Query: 400 ---EVVKLMESNVTKAMQYLQNKGLCLMPIALATAI-SSGKASSSDTISEEN 447
+V KLME NV AMQ LQ+K LC+MPI+LA AI S +S + EN
Sbjct: 255 TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPEN 306
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 115/159 (72%), Gaps = 7/159 (4%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
A P T + RVRARRGQATDPHSIAERLRRE+IAER+++LQELVP NKTD+A+M+
Sbjct: 130 APPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMI 189
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSD 393
DEI+DYVKFL+LQVKVLSMSRLG AGAV PL+T+ +S Q V ++D
Sbjct: 190 DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE-----DETQAVWEKWSND 244
Query: 394 QIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
E +V KLME NV AMQ LQ+K LC+MPI+LA AI
Sbjct: 245 --GTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAI 281
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 127/193 (65%), Gaps = 26/193 (13%)
Query: 251 CFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKI 310
F +P+PT +PS P RVRARRGQATDPHSIAERLRRE+I
Sbjct: 100 AFHGQPMPTT----VPSAPHPPPMRP----------RVRARRGQATDPHSIAERLRRERI 145
Query: 311 AERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQA 370
AER++ LQELVP+ NKTD+A MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL
Sbjct: 146 AERIRALQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPL-----E 200
Query: 371 EASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALAT 430
E +G P ++ ++D E++V KLME N+ AMQ+LQ+K LC+MPI+LA+
Sbjct: 201 EGGEGGRNQPAWEK-----WSND--GTEKQVAKLMEENIGAAMQFLQSKALCIMPISLAS 253
Query: 431 AISSGKASSSDTI 443
AI + S + +I
Sbjct: 254 AIYQSQPSENSSI 266
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 121/167 (72%), Gaps = 15/167 (8%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAER++ LQELVP +KTD+A+M+DEI+DYVKFL+
Sbjct: 147 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKTDRAAMIDEIVDYVKFLR 206
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQAD---QGVDISLNSDQIAFEEEV 401
LQVKVLSMSRLG AGAV PL+T+ + LS + QGV ++D E +V
Sbjct: 207 LQVKVLSMSRLGGAGAVAPLVTE--------MPLSSSIEDETQGVWEKWSND--GTELQV 256
Query: 402 VKLMESNVTKAMQYLQNKGLCLMPIALATAI--SSGKASSSDTISEE 446
KLME NV AMQ LQ+K LC+MPI+LA AI S + +SS I E
Sbjct: 257 AKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPQDTSSSIIKPE 303
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 101/163 (61%), Gaps = 30/163 (18%)
Query: 296 TDPHSIAER----------------------LRREKIAERMKNLQELVPNSNKTDKASML 333
TDPHSIAER LRRE+IAERMK LQELVPN+NKTDKASML
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASML 278
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLIT--------DGQAEASKGLSLSPQADQG 385
DEIIDYVKFLQLQVKVLSMSRLG A AV PL+ +G A +S G +
Sbjct: 279 DEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESNGNGNATSSSGNGEAANGSSN 338
Query: 386 VDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIAL 428
D + E++V KLME ++ AMQYLQ KGLCLMPI+L
Sbjct: 339 GDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISL 381
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 101/163 (61%), Gaps = 30/163 (18%)
Query: 296 TDPHSIAER----------------------LRREKIAERMKNLQELVPNSNKTDKASML 333
TDPHSIAER LRRE+IAERMK LQELVPN+NKTDKASML
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASML 279
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLIT--------DGQAEASKGLSLSPQADQG 385
DEIIDYVKFLQLQVKVLSMSRLG A AV PL+ +G A +S G +
Sbjct: 280 DEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESNGNGNATSSSGNGEAANGSSN 339
Query: 386 VDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIAL 428
D + E++V KLME ++ AMQYLQ KGLCLMPI+L
Sbjct: 340 GDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISL 382
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 101/163 (61%), Gaps = 30/163 (18%)
Query: 296 TDPHSIAER----------------------LRREKIAERMKNLQELVPNSNKTDKASML 333
TDPHSIAER LRRE+IAERMK LQELVPN+NKTDKASML
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASML 279
Query: 334 DEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLIT--------DGQAEASKGLSLSPQADQG 385
DEIIDYVKFLQLQVKVLSMSRLG A AV PL+ +G A +S G +
Sbjct: 280 DEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESNGNGNATSSSGNGEAANGSSN 339
Query: 386 VDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIAL 428
D + E++V KLME ++ AMQYLQ KGLCLMPI+L
Sbjct: 340 GDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISL 382
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 136/204 (66%), Gaps = 33/204 (16%)
Query: 248 PLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRR 307
P + F +P+PT TV PT + RVRARRGQATDPHSIAERLRR
Sbjct: 96 PKNFFHGQPMPT--TV------------PTAPHPPAVRPRVRARRGQATDPHSIAERLRR 141
Query: 308 EKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITD 367
E+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL+TD
Sbjct: 142 ERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD 201
Query: 368 GQAEASKGLSLSPQADQGVDISLNSDQIAFEE--------EVVKLMESNVTKAMQYLQNK 419
+ LS ++G + +Q A+E+ +V KLME NV AMQ+LQ+K
Sbjct: 202 --------IPLSSVEEEGGE---GRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSK 250
Query: 420 GLCLMPIALATAISSGKASSSDTI 443
LC+MP++LA+AI + S + +I
Sbjct: 251 ALCIMPVSLASAIYQSQPSGTSSI 274
>gi|224088258|ref|XP_002308393.1| predicted protein [Populus trichocarpa]
gi|222854369|gb|EEE91916.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 102/153 (66%), Gaps = 13/153 (8%)
Query: 314 MKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEAS 373
MK LQELVPN+NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV PL+ D +EA
Sbjct: 1 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEAG 60
Query: 374 KGLSLSPQADQG-VDISLNSDQIA---------FEEEVVKLMESNVTKAMQYLQNKGLCL 423
G + A+ G + + N +Q A E +V KLME ++ AMQYLQ KGLCL
Sbjct: 61 -GDCIQANANGGSIARTTNGNQTASTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCL 119
Query: 424 MPIALATAISSGKAS--SSDTISEENKFCFSNG 454
MPI+LATAIS+ +S I+ N SNG
Sbjct: 120 MPISLATAISTATCHNRTSGIINSHNPLLQSNG 152
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
+ RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQ
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 306
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAE 371
LQ VLSMSRLG A AV PL+ D +E
Sbjct: 307 LQ--VLSMSRLGGAAAVAPLVADMSSE 331
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 95/153 (62%), Gaps = 22/153 (14%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 354
ATDPHSIAERLRRE+IAERMK+LQELVPN+NKTDKASMLDEIIDYVKFLQLQVKVLSMSR
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 279
Query: 355 LGAAGAVLPLITD---------------------GQAEASKGLSLSPQADQGVDISLNSD 393
LG A + PL+ G A+ + + S
Sbjct: 280 LGGAAGMAPLVASMASSEGNSNGSGGGNNNSGGKGSGGAASATTTTKSGSGENGNGNGSG 339
Query: 394 QIAFEEEVV-KLMESNVTKAMQYLQNKGLCLMP 425
+ E V K+ME ++ AMQYLQ KGLCLMP
Sbjct: 340 GVRVTEHQVAKMMEEDMGTAMQYLQGKGLCLMP 372
>gi|356502774|ref|XP_003520191.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 274
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 129/205 (62%), Gaps = 35/205 (17%)
Query: 248 PLSCFSSRPLPT-VPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLR 306
P + F +P+PT VPT P L RARRGQATDPHSIAERLR
Sbjct: 87 PNNVFDGQPMPTTVPTA--PHLPAVRPRV-------------RARRGQATDPHSIAERLR 131
Query: 307 REKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLIT 366
RE+IAER++ LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKV ++ G A AV PL+T
Sbjct: 132 RERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVNALXXXGGADAVAPLVT 191
Query: 367 DGQAEASKGLSLSPQADQGVDISLNSDQIAFEE--------EVVKLMESNVTKAMQYLQN 418
D + LS ++G + +Q A+E+ +V KLME NV AMQ+LQ+
Sbjct: 192 D--------IPLSSVEEEGGE---GRNQPAWEKCSNDGTERQVAKLMEENVGAAMQFLQS 240
Query: 419 KGLCLMPIALATAISSGKASSSDTI 443
K LC+MP++LA+AI + S + +I
Sbjct: 241 KALCIMPVSLASAIYQSQPSDTSSI 265
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 93/158 (58%), Gaps = 17/158 (10%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
G A V + G T P +RLRRE+IAERMK+LQELVPN+NKTDKASMLDEIIDYVKFL
Sbjct: 133 GTAPVTSSGGGGTAPPR-QQRLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFL 191
Query: 344 QLQVKVLSMSRLGAAGAVLPLITD----------------GQAEASKGLSLSPQADQGVD 387
QLQVKVLSMSRLG A + PL+ ++ G G
Sbjct: 192 QLQVKVLSMSRLGGAAGMAPLVASMSSEGNSNGSSNGGGGKASKGGTGGEGGGGGGGGGG 251
Query: 388 ISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMP 425
E++V K+ME ++ AMQYLQ KGLCLMP
Sbjct: 252 GGTGGGMRVTEQQVAKMMEEDMGTAMQYLQGKGLCLMP 289
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 67/71 (94%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
NG K RVRARRGQATDPHSIAERLRREKI++RMKNLQELVPNSN+TDKASMLDEII+YV
Sbjct: 291 NGAPKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYV 350
Query: 341 KFLQLQVKVLS 351
KFLQLQVKV S
Sbjct: 351 KFLQLQVKVRS 361
>gi|224082728|ref|XP_002306815.1| predicted protein [Populus trichocarpa]
gi|222856264|gb|EEE93811.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 91/132 (68%), Gaps = 12/132 (9%)
Query: 317 LQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITD-----GQAE 371
LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV PL+TD + E
Sbjct: 52 LQELVPSVNKTDRATMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEDE 111
Query: 372 ASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATA 431
+G P ++ ++D E +V KLME NV AMQ+LQ+K LC+MPI+LATA
Sbjct: 112 TGEGGRNQPAWEKW-----SND--GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATA 164
Query: 432 ISSGKASSSDTI 443
I + + TI
Sbjct: 165 IYHTQPPDTTTI 176
>gi|115470903|ref|NP_001059050.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|113610586|dbj|BAF20964.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|215694864|dbj|BAG90055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 136
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 3/119 (2%)
Query: 314 MKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEAS 373
M+ LQ+LVPN+NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLG AGAV L+ D
Sbjct: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPISV- 59
Query: 374 KGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
KG + + Q + ++D E++V KLME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 60 KGEASDSGSKQQIWEKWSTD--GTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAI 116
>gi|195649667|gb|ACG44301.1| BHLH transcription factor [Zea mays]
Length = 136
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 85/119 (71%), Gaps = 3/119 (2%)
Query: 314 MKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEAS 373
M+ LQELVPN+NKTD+A MLDEI+DYVKFL+LQVKVLSMSRLG AGAV L+ D
Sbjct: 1 MRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSV- 59
Query: 374 KGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
KG + + Q + ++D E ++ KLME ++ AMQ+LQ+K LC+MPI+LA AI
Sbjct: 60 KGEASDSGSKQQIWEKWSTD--GTERQIAKLMEEDIGAAMQFLQSKALCMMPISLAMAI 116
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 304 RLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLP 363
+LRRE+IAERMK LQELVPN+NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV P
Sbjct: 140 QLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVGP 199
Query: 364 LIT 366
L+
Sbjct: 200 LVA 202
>gi|195620662|gb|ACG32161.1| hypothetical protein [Zea mays]
gi|413939309|gb|AFW73860.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 170
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 16/119 (13%)
Query: 326 KTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLIT----------DGQAEASKG 375
+TDKASMLDEIIDYVKFLQLQVKVLSMSRLG A AV L+ DG +++ KG
Sbjct: 6 QTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATAVGTLVAGIASEGNGSGDGTSDSGKG 65
Query: 376 LSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISS 434
+ + + G + + E++V +LME ++ AMQYLQ KGLCLMPI+LA+AISS
Sbjct: 66 NAANGENGGGGSLQVT------EQQVARLMEEDMGTAMQYLQGKGLCLMPISLASAISS 118
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 184 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQR 243
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L L D
Sbjct: 244 QVEFLSM-KLAAVNPRLDLSID 264
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ
Sbjct: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVD 387
QV+ LSM +V P+ D + + P Q ++
Sbjct: 242 QVEFLSMK----LASVNPMFYDFGMDLDNTFMVRPDDQQNLN 279
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 372 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 431
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 432 QVEFLSM 438
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 186 TDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQ 245
Query: 342 FLQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 246 SLQKQVEFLSM 256
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 279 GCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEII 337
G TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII
Sbjct: 171 GGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEII 230
Query: 338 DYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQ 381
+YV+ LQ QV+ LSM ++ P+ D + + GL + P+
Sbjct: 231 NYVQSLQNQVEFLSMK----LASLNPIFFDFRMDLD-GLMIQPE 269
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 186 TDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQ 245
Query: 342 FLQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 246 SLQKQVEFLSM 256
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 255 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 314
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 315 QVEFLSM 321
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 142 TGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQ 201
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITD 367
LQ QV+ LSM L TD
Sbjct: 202 SLQNQVEFLSMKLASVNPMFYDLATD 227
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 144 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 203
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 204 QVEFLSM-KLAAVNPRLDFNID 224
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 166 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 225
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L L +D
Sbjct: 226 QVEFLSM-KLATVNPALEFNSD 246
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 430
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 431 QVEFLSM 437
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 279 GCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEII 337
G TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII
Sbjct: 139 GGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEII 198
Query: 338 DYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQ 381
+YV+ LQ QV+ LSM ++ P+ D + + GL + P+
Sbjct: 199 NYVQSLQNQVEFLSMK----LASLNPIFFDFRMDLD-GLMIQPE 237
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 248 HVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 307
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 308 QVEFLSM-KLAAVNPRLDFNVD 328
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 159 TGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQ 218
Query: 342 FLQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 219 SLQNQVEFLSM 229
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 121 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQC 180
Query: 346 QVKVLSMSRLGAAGAVLPLITDG 368
QV+ LSM +L A L +G
Sbjct: 181 QVEFLSM-KLAAVNPQLDCNVEG 202
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 430
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 431 QVEFLSM 437
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 7/102 (6%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 371 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 430
Query: 346 QVKVLSMSRLGAAG-----AVLPLITDGQAEASKGLSLSPQA 382
QV+ LSM +L + ++ L+T +++ L+ P A
Sbjct: 431 QVEFLSM-KLASVNTRMDLSIESLVTKDVFQSNNSLATHPNA 471
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 13/87 (14%)
Query: 279 GCNGTGKAR------------VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
G NG GK + VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP+ NK
Sbjct: 11 GGNGKGKEKEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNK 70
Query: 327 -TDKASMLDEIIDYVKFLQLQVKVLSM 352
T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 71 VTGKAVMLDEIINYVQSLQRQVEFLSM 97
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 289 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQR 348
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L + L T+
Sbjct: 349 QVEFLSM-KLSSVNTRLDFSTE 369
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 248 HVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 307
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 308 QVEFLSM-KLAAVNPRLDFNVD 328
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 224 VEFLSM 229
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 236 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 295
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 296 QVEFLSM 302
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 224 VEFLSM 229
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 12/99 (12%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 126 VRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQ 185
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQG 385
V+ LSM +L A A+A++G+ + P D G
Sbjct: 186 VEFLSM-KLEAV----------NAQANQGVEVFPAKDYG 213
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 262 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 321
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 322 QVEFLSM 328
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 233 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 292
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 293 QVEFLSM-KLAAVNPRLDFNID 313
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 159 TGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQ 218
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITD 367
LQ QV+ LSM L TD
Sbjct: 219 SLQNQVEFLSMKLASVNPMFYDLATD 244
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 385 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 444
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 445 QVEFLSM 451
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI ERMK LQ LVP+ NK T KA MLDEII+YV+ LQ
Sbjct: 257 HVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQR 316
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 317 QVEFLSM 323
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 349 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 408
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 409 QVEFLSM 415
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 64/93 (68%), Gaps = 6/93 (6%)
Query: 278 GGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEI 336
G N VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEI
Sbjct: 23 GAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEI 82
Query: 337 IDYVKFLQLQVKVLSMSRLGAAGAVLP-LITDG 368
I+YV+ LQ QV+ LSM AV P L TD
Sbjct: 83 INYVQSLQRQVEFLSMK----LAAVKPALYTDA 111
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 345 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 404
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 405 QVEFLSM 411
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 273 SANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKAS 331
S+ T T VRARRGQATD HSIAER+RREKI+ERMK LQ+LVP +K T KA
Sbjct: 157 SSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAG 216
Query: 332 MLDEIIDYVKFLQLQVKVLSM 352
MLDEII+YV+ LQ Q++ LSM
Sbjct: 217 MLDEIINYVQSLQRQIEFLSM 237
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 338 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 397
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 398 QVEFLSM 404
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 148 TGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQ 207
Query: 342 FLQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 208 SLQNQVEFLSM 218
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 368 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 427
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 428 QVEFLSM 434
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 5/86 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 167 TGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQ 226
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITD 367
LQ QV+ LSM +V PL D
Sbjct: 227 SLQNQVEFLSMK----LASVNPLFYD 248
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 85/140 (60%), Gaps = 17/140 (12%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 257 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 316
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLM 405
QV+ LSM +L + L D A SK DI +S+ + ++V++L
Sbjct: 317 QVEFLSM-KLSSVNTRLDFNMD--ALLSK------------DIFPSSNNLMHHQQVLQL- 360
Query: 406 ESNVTKAMQYLQNKGLCLMP 425
+S+ + NK L L P
Sbjct: 361 DSSAETLLGDHHNKNLQLNP 380
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 85/140 (60%), Gaps = 17/140 (12%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 251 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 310
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLM 405
QV+ LSM +L + L D A SK DI +S+ + ++V++L
Sbjct: 311 QVEFLSM-KLSSVNTRLDFNMD--ALLSK------------DIFPSSNNLMHHQQVLQL- 354
Query: 406 ESNVTKAMQYLQNKGLCLMP 425
+S+ + NK L L P
Sbjct: 355 DSSAETLLGDHHNKNLQLNP 374
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 5/86 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 167 TGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQ 226
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITD 367
LQ QV+ LSM +V P+ D
Sbjct: 227 SLQNQVEFLSM----KLASVNPMFYD 248
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 299 GYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 358
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 359 LQRQVEFLSM 368
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HSIAER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 167 TDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQ 226
Query: 342 FLQLQVKVLSM 352
LQ Q++ LSM
Sbjct: 227 SLQRQIEFLSM 237
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 357 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 416
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 417 QVEFLSM 423
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HSIAER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 167 TDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQ 226
Query: 342 FLQLQVKVLSM 352
LQ Q++ LSM
Sbjct: 227 SLQRQIEFLSM 237
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 85/140 (60%), Gaps = 17/140 (12%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 257 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 316
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLM 405
QV+ LSM +L + L D A SK DI +S+ + ++V++L
Sbjct: 317 QVEFLSM-KLSSVNTRLDFNMD--ALLSK------------DIFPSSNNLMHHQQVLQL- 360
Query: 406 ESNVTKAMQYLQNKGLCLMP 425
+S+ + NK L L P
Sbjct: 361 DSSAETLLGDHHNKNLQLNP 380
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 384 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 443
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 444 QVEFLSM 450
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 210 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQR 269
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 270 QVEFLSM-KLAAVNPRLDFNLD 290
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 290 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 349
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 350 QVEFLSM 356
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 298 GYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 357
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 358 LQRQVEFLSM 367
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HSIAER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 167 TDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQ 226
Query: 342 FLQLQVKVLSM 352
LQ Q++ LSM
Sbjct: 227 SLQRQIEFLSM 237
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 257 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 316
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 317 QVEFLSM 323
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 299 GYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 358
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 359 LQRQVEFLSM 368
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 301 GYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 360
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 361 LQQQVEFLSM 370
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 299 GYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 358
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 359 LQRQVEFLSM 368
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 300 HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 359
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 360 QVEFLSM 366
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 268 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 327
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 328 QVEFLSM 334
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HSIAER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 164 TDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQ 223
Query: 342 FLQLQVKVLSM 352
LQ Q++ LSM
Sbjct: 224 SLQRQIEFLSM 234
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 253 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQH 312
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 313 QVEFLSM 319
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 224 VEFLSM 229
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 300 HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 359
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 360 QVEFLSM 366
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ
Sbjct: 145 HVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQK 204
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 205 QVEFLSM 211
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 161 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 220
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 221 VEFLSM 226
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 262 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 321
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 322 QVEFLSM 328
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 264 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 323
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 324 QVEFLSM 330
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 298 HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 357
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 358 QVEFLSM 364
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERM LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 193 HVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQR 252
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 253 QVEFLSM-KLAAVNPRLDFSMD 273
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 215 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQH 274
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 275 QVEFLSM 281
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ
Sbjct: 145 HVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQK 204
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 205 QVEFLSM 211
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 12/117 (10%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 124 VRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQ 183
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVK 403
V+ LSM +L A A A++G+ P D G + + + F+ + +
Sbjct: 184 VEFLSM-KLEAV----------NAHANQGVEAFPVKDYGAETYNTAPGLTFDTQTSR 229
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 352 HVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 411
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 412 QVEFLSM 418
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 26 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 85
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 86 QVEFLSM 92
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 239 HVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQ 298
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 299 QVEFLSM 305
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 231 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 290
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 291 QVEFLSM 297
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 62/76 (81%), Gaps = 2/76 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 150 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 209
Query: 347 VKVLSMSRLGAAGAVL 362
V+ LSM ++ AA V+
Sbjct: 210 VEFLSM-KIAAANPVV 224
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 403 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 462
Query: 346 QVKVLSMSRLGAAGAVLPLITDG 368
QV+ LSM +L L DG
Sbjct: 463 QVEFLSM-KLATVNPRLDFNMDG 484
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 142 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQR 201
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 202 QVEFLSM-KLAAVNPRLDFNID 222
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQELVP +K T KA MLDEII+YV+ LQ
Sbjct: 368 HVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQR 427
Query: 346 QVKVLSMSRLGAAGAVLPLITDG 368
QV+ LSM +L L + DG
Sbjct: 428 QVEFLSM-KLATVNPRLDINIDG 449
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G +RARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 164 GYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQS 223
Query: 343 LQLQVKVLSMSRLGAAGAVLPL 364
LQ Q++ LSM +L A VL
Sbjct: 224 LQCQIEFLSM-KLSAVNPVLDF 244
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 5/86 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 166 TGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQ 225
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITD 367
LQ QV+ LSM +V P+ D
Sbjct: 226 SLQNQVEFLSMK----LASVNPMFYD 247
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 337
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 338 VEFLSM 343
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G +RARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 219 GYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQS 278
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ Q++ LSM +L A VL
Sbjct: 279 LQCQIEFLSM-KLSAVNPVL 297
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 54 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 113
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 114 VESLSM 119
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RR++I+ERMK LQ LVP NK T KA MLDEII+YV+ LQ
Sbjct: 246 HVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQR 305
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGL 376
QV+ LSM +L L L DGQ + SK +
Sbjct: 306 QVEFLSM-KLSTMNPQLDL--DGQYKPSKDM 333
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 440 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 499
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 500 QVENLSM 506
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQELVP +K T KA MLDEII+YV+ LQ
Sbjct: 324 HVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQR 383
Query: 346 QVKVLSMSRLGAAGAVLPLITDG 368
QV+ LSM +L L + DG
Sbjct: 384 QVEFLSM-KLATVNPRLDINIDG 405
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G +RARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 168 GYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQS 227
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ Q++ LSM +L A VL
Sbjct: 228 LQCQIEFLSM-KLSAVNPVL 246
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 317
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 318 VEFLSM 323
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+L+P NK KA MLDEII+YV+ LQ
Sbjct: 191 HVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQR 250
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 251 QVEFLSM-KLAAVNPRLDFNID 271
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 72/105 (68%), Gaps = 9/105 (8%)
Query: 272 ASANPTG--GCNGTGKAR-----VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 324
A+A P+G N T A+ VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP
Sbjct: 53 ANAKPSGTNAKNSTDGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 112
Query: 325 NK-TDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDG 368
+K T KA MLDEII+YV+ LQ QV+ LSM +L A L +G
Sbjct: 113 SKVTGKAVMLDEIINYVQSLQRQVEFLSM-KLAAVNPTLDFNIEG 156
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 241 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 300
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 301 QVEFLSM 307
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HS+AER+RREKI+ERM+ LQ LVP +K T KA MLDEII+YV+
Sbjct: 131 TDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQ 190
Query: 342 FLQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 191 TLQTQVEFLSM 201
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI +RMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 295 HVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQH 354
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 355 QVEFLSM 361
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 247 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 306
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 307 QVEFLSM 313
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERMK LQ+L+P NK KA MLDEII+YV+ LQ
Sbjct: 191 HVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQR 250
Query: 346 QVKVLSMSRLGAAGAVLPLITD 367
QV+ LSM +L A L D
Sbjct: 251 QVEFLSM-KLAAVNPGLDFNID 271
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 203 VEFLSM 208
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 255 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 314
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 315 QVEFLSM 321
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 247 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 306
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 307 QVEFLSM 313
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 203 VEFLSM 208
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I+ERMK LQELVP +K KAS LDEII+YV+ LQ
Sbjct: 131 HVRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQR 190
Query: 346 QVKVLSMSRLGAA 358
QV+ LSM +L AA
Sbjct: 191 QVEFLSM-KLAAA 202
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 162 HVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQ 221
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 222 QVEFLSM 228
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 153 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 212
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 213 VEFLSM 218
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 277 TGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDE 335
GG G VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDE
Sbjct: 169 AGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDE 228
Query: 336 IIDYVKFLQLQVKVLSM 352
II YV+ LQ QV+ LSM
Sbjct: 229 IISYVQSLQNQVEFLSM 245
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 240 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 299
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 300 QVEFLSM 306
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 9/103 (8%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HSIAER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 112 VRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQ 171
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAE--------ASKGLSLSPQ 381
V+ LSM V I Q++ + GL+L PQ
Sbjct: 172 VEFLSMKLEAVNAHVNNRIASFQSKDVGAEPFHTALGLTLDPQ 214
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI ERMK LQ+LVP NK T KA M+DEII+YV+ LQ Q
Sbjct: 218 VRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQ 277
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 278 VEFLSM 283
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 203 VEFLSM 208
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 277 TGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDE 335
GG G VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDE
Sbjct: 169 AGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDE 228
Query: 336 IIDYVKFLQLQVKVLSM 352
II YV+ LQ QV+ LSM
Sbjct: 229 IISYVQSLQNQVEFLSM 245
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I+ERMK LQ LVP NK T KA MLDEII+YV+ LQ
Sbjct: 80 HVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQR 139
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 140 QVEFLSM 146
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 628 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 687
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 688 QVEFLSM 694
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I+ERMK LQ LVP NK T KA MLDEII+YV+ LQ
Sbjct: 110 HVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQR 169
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 170 QVEFLSM 176
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 256 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 316 VEFLSM 321
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP ++ T KA +LDEII+YV+
Sbjct: 140 TGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQ 199
Query: 342 FLQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM +L + +
Sbjct: 200 SLQNQVEFLSM-KLASVNPIF 219
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 252 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 311
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 312 QVEFLSM 318
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 129 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 188
Query: 347 VKVLS 351
V+ LS
Sbjct: 189 VEFLS 193
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 16 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 75
Query: 347 VKVLSMSRLGAAGAVLPLITDG 368
V+ LSM +L A L + DG
Sbjct: 76 VEFLSM-KLAAVNPRLDINLDG 96
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 58 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 117
Query: 347 VKVLSMS 353
V+ LSM
Sbjct: 118 VEFLSMK 124
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 240 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 299
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 300 QVEFLSM 306
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 173 HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 232
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 233 QVEFLSM 239
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 173 HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 232
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 233 QVEFLSM 239
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 239 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 298
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 299 VEFLSM 304
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 206 VEFLSM 211
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 272 ASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKA 330
A++ P + VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA
Sbjct: 53 ATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKA 112
Query: 331 SMLDEIIDYVKFLQLQVKVLSM 352
MLDEII+YV+ LQ Q++ LSM
Sbjct: 113 VMLDEIINYVQSLQRQIEFLSM 134
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 79 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 138
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 139 VEFLSM 144
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN-KTDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQELVP + KT KA MLDEII+YV+ LQ
Sbjct: 230 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQ 289
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 290 QVEFLSM 296
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 64 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 123
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 124 VEFLSM 129
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RREKI+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 131 GYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQS 190
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 191 LQNQVEFLSM 200
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 170 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 229
Query: 346 QVKVLSM------SRLGAAGAVLPLITDGQAEA-SKGLSLSPQA 382
QV+ LSM SR+G V P GQ + G++ QA
Sbjct: 230 QVEFLSMKLEAVNSRIGPGIEVFPPKDYGQQTFDTTGVAFGSQA 273
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 257 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 316
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 317 QVEFLSM 323
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 67/104 (64%), Gaps = 10/104 (9%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 205
Query: 347 VKVLSM------SRLGAAGAV---LPLITDGQAEASKGLSLSPQ 381
V+ LSM SR+G V P D Q + G+ PQ
Sbjct: 206 VEFLSMKLEAVNSRMGMNPTVEGFHPKDADAQPFDATGMIFGPQ 249
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP K T KA MLDEII+YV+ LQ Q
Sbjct: 388 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 447
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 448 VESLSM 453
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 73 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 132
Query: 347 VKVLSM 352
++ LSM
Sbjct: 133 IEFLSM 138
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 252 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 311
Query: 346 QVKVLSMSRLGAAGAVLPL 364
QV+ LSM +L + L L
Sbjct: 312 QVEFLSM-KLASVNPTLDL 329
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 8/103 (7%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 47 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 106
Query: 347 VKVLSM------SRLGAAGAVLPLITDGQAEA-SKGLSLSPQA 382
V+ LSM SR+G V P GQ + G++ QA
Sbjct: 107 VEFLSMKLEAVNSRIGPGIEVFPPKDYGQQTFDTTGVAFGSQA 149
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 256 HIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 315
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 316 QVEFLSM 322
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 259 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 318
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 319 QVEFLSM 325
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 368 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 427
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 428 QVEFLSM 434
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 259 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 318
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 319 QVEFLSM 325
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 370 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 429
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 430 QVEFLSM 436
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 248 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 307
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 308 QVEFLSM 314
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 255 HIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 314
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 315 QVEFLSM 321
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 155 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 214
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 215 QVEFLSM 221
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 189 HVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQR 248
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 249 QVEFLSM 255
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RARRGQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 245 HIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 304
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 305 QVEFLSM 311
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERMK LQ LVP +K T KA MLDEII+YV+
Sbjct: 170 GYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQS 229
Query: 343 LQLQVKVLSMSRLGAAGAVLPLITD 367
LQ QV+ LSM +V PL+ D
Sbjct: 230 LQNQVEFLSMK----LASVNPLLYD 250
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G + VRAR+GQAT+ HS+AERLRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 172 GYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQS 231
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 232 LQRQVEFLSM 241
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 406 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 465
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 466 QVEFLSM 472
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 193 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 252
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 253 QVEFLSM 259
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 203 HMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 262
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 263 QVEFLSM 269
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 134 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 193
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 194 VEFLSM 199
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 216 QVEFLSM 222
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 69/115 (60%), Gaps = 18/115 (15%)
Query: 256 PLPTVPTVGLPSLQQTASANPTG------------GCNGTGKAR-----VRARRGQATDP 298
P P G P QQ PT G G+ + + VRARRGQAT+
Sbjct: 101 PQSAEPAKGSPETQQKGDQKPTSTTSKDAGKQGKQGSLGSDQPKEEYIHVRARRGQATNS 160
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLSM 352
HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 161 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 215
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 367 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 426
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 427 QVEFLSM 433
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 216 QVEFLSM 222
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 205 HMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 264
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 265 QVEFLSM 271
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI +RMK LQELVP NK + A +LDEII++V+FLQ
Sbjct: 181 HVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQR 240
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQA 382
QV++LSM RL A + D A +++ +A
Sbjct: 241 QVEILSM-RLAAVNPRIDFNLDSMLSAEFSFTITCKA 276
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 216 QVEFLSM 222
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 76 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 135
Query: 347 VKVLSM 352
++ LSM
Sbjct: 136 IEFLSM 141
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 276 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 335
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 336 QVEFLSM 342
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 316 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 375
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 376 QVEFLSM 382
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 155 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 214
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 215 QVEFLSM 221
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 301 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 360
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 361 QVEFLSM 367
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 156 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 215
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 216 QVEFLSM 222
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 95 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 154
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 155 VEFLSM 160
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 263 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 322
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 323 QVEFLSM 329
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI+ERM+ LQ LVP +K T KA MLDEII+YV+ LQ
Sbjct: 136 HVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQN 195
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 196 QVEFLSM 202
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ Q
Sbjct: 59 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 118
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 119 VEFLSM 124
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ
Sbjct: 127 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQH 186
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 187 QVEFLSM 193
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 357 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 416
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 417 QVEFLSM 423
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 263 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 322
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 323 QVEFLSM 329
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 192 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 251
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 252 QVEFLSM 258
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ LVP K T KA MLDEII+YV+ LQ
Sbjct: 258 HVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQR 317
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 318 QVEFLSM 324
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 153 HMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 212
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 213 QVEFLSM 219
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 158 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 217
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 218 VEFLSM 223
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VRA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 136 VHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQ 195
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 196 RQVEFLSM 203
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRA+RGQAT+ HS+AER+RRE+I+ERM+ LQELVP NK T KA MLDEII+YV+ LQ
Sbjct: 233 HVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 292
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 293 QVEFLSM 299
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 66/107 (61%), Gaps = 20/107 (18%)
Query: 266 PSLQQTASANPTGGCNGTGKAR-------------------VRARRGQATDPHSIAERLR 306
P +++TAS GG G +A+ VRARRGQATD HS+AER+R
Sbjct: 136 PKVEETASDGSAGGERGRKQAKGKSSKSKQADDEPPRDYVHVRARRGQATDSHSLAERVR 195
Query: 307 REKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLSM 352
REKI +MK LQ+LVP NK KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 196 REKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSM 242
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
TG VRARRGQATD HS+AER+RREKI+ERM LQ+LVP +K T KA +L+EII+YV
Sbjct: 113 STGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYV 172
Query: 341 KFLQLQVKVLSMSRLGAAGAVL 362
+ LQ QV+ LSM +L + +L
Sbjct: 173 QSLQHQVEFLSM-KLASVNPML 193
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 193 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 252
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 253 QVEFLSM 259
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 193 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 252
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 253 QVEFLSM 259
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 156 VRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQ 215
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 216 VEFLSM 221
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 220 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 279
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 280 QVEFLSM 286
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 251 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 310
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 311 QVEFLSM 317
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 184 HVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQR 243
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 244 QVEFLSM 250
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAE 371
++ LSM +L A G L D Q E
Sbjct: 184 IEFLSM-KLSAIGPGLNCDLDLQDE 207
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 184 HVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQR 243
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 244 QVEFLSM 250
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RA+RGQAT+ HS+AER RREKI ERMK+LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 117 HIRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQR 176
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 177 QVEFLSM 183
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 184 HVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQR 243
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 244 QVEFLSM 250
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 203 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 262
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 263 QVEFLSM 269
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 167 HVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQR 226
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 227 QVEFLSM 233
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 184 HVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQR 243
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 244 QVEFLSM 250
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 279 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 338
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 339 QVEFLSM 345
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 279 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 338
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 339 QVEFLSM 345
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 203 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 262
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 263 QVEFLSM 269
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 269 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 328
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 329 QVEFLSM 335
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERM LQ+LVP N+ T KA MLDEII+YV+ LQ
Sbjct: 190 HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQR 249
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 250 QVEFLSM 256
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 186 HVRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQR 245
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 246 QVEFLSM 252
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 127 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQS 186
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 187 LQNQVEFLSM-RIASMSPVL 205
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERM LQ+LVP N+ T KA MLDEII+YV+ LQ
Sbjct: 193 HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQR 252
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 253 QVEFLSM 259
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RRE+I++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 203 HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQR 262
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 263 QVEFLSM 269
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 118 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 177
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 178 LQNQVEFLSM-RIASMSPVL 196
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 184 HVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQR 243
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 244 QVEFLSM 250
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 98 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 157
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAE 371
++ LSM +L A G L D Q E
Sbjct: 158 IEFLSM-KLSAIGPGLNCDLDLQDE 181
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HSIAER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 118 HVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQH 177
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 178 QVEFLSM 184
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 92.4 bits (228), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP K T KA MLDEII+YV+FLQ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQ 65
Query: 347 VK 348
V+
Sbjct: 66 VE 67
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
T VRARRGQATD HS+AER RREKI+++MK+LQ+LVP NK T +A MLDEII+YV+
Sbjct: 197 TDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQ 256
Query: 342 FLQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 257 SLQRQVEFLSM 267
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 83/146 (56%), Gaps = 20/146 (13%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPN-SNKTDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER RREKI+ RMK LQ LVP S T KA ML+EII+YVK
Sbjct: 146 GFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKS 205
Query: 343 LQLQVKVLSMSRLGAAGAVLPLITDG----QAEASKGLSLSPQADQGVDISLNSDQIAFE 398
LQ Q++ LSM +L A + +G +AE G + A Q SL++ Q E
Sbjct: 206 LQRQIEFLSM-KLAAVDPRVDTNVEGLLKMEAEHWTGKNARCSAVQ----SLHTMQYQVE 260
Query: 399 EEVV----------KLMESNVTKAMQ 414
EE+ KL SN+T A +
Sbjct: 261 EEIALLTSDPSELYKLKSSNITSAKE 286
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 258 PTVPTVGLPSLQQTASA--NPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMK 315
P V G P + +S T T VRARRGQATD HS+AER RREKI+++MK
Sbjct: 5 PKVKEKGSPEISADSSKENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMK 64
Query: 316 NLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLSM 352
LQ+LVP NK T +A MLDEII+YV+ LQ QV+ +SM
Sbjct: 65 CLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFISM 102
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRA+RGQAT+ HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 245 HVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQR 304
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 305 QVEFLSM 311
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 124 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 183
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 184 QVEFLSM 190
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 135 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 194
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 195 LQNQVEFLSM-RIASMSPVL 213
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 278 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 337
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 338 QVEFLSM 344
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 121 GYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQS 180
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 181 LQNQVEFLSM-RIASMSPVL 199
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 105 GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQS 164
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 165 LQNQVEFLSM-RIASLSPVL 183
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 135 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 194
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 195 LQNQVEFLSM-RIASMSPVL 213
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 340 HVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 399
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 400 QVEFLSM 406
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 189 HVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 248
Query: 346 QVKVLSM 352
QV+ LS+
Sbjct: 249 QVEFLSL 255
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 119 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 178
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 179 LQNQVEFLSM-RIASMSPVL 197
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 73 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 132
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 133 QVEFLSM 139
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 9/103 (8%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ++VP NK KAS+LDEII+Y++ LQ Q
Sbjct: 123 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 182
Query: 347 VKVLSM------SRLGAAGAVLPLITDGQA--EASKGLSLSPQ 381
V+ LSM + + A P G A + L+L PQ
Sbjct: 183 VEFLSMKLEAINAHVSNATVAFPTKDFGVAPYNTAPSLTLDPQ 225
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+++MK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 189 HVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 248
Query: 346 QVKVLSM 352
QV+ LS+
Sbjct: 249 QVEFLSL 255
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQAT+ HS+AER+RREKI+ERM+ LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 340 HVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 399
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 400 QVEFLSM 406
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 347 VKVLSMSRLGAAGAVLPLITDGQ 369
++ LSM +L A G L D Q
Sbjct: 184 IEFLSM-KLSAIGPGLNCDLDLQ 205
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 107 GYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQS 166
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 167 LQNQVEFLSM-RIASLSPVL 185
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 107 GYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQS 166
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 167 LQNQVEFLSM-RIASLSPVL 185
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 687 QVEFLSM 693
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 687 QVEFLSM 693
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 347 VKVLSMSRLGAAG 359
++ LSM +L A G
Sbjct: 184 IEFLSM-KLSAIG 195
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 98 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 157
Query: 347 VKVLSMSRLGAAGAVLPLITDGQ 369
++ LSM +L A G L D Q
Sbjct: 158 IEFLSM-KLSAIGPGLNCDLDLQ 179
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 687 QVEFLSM 693
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RRE+I+ERM+ LQELVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 347 VKV 349
V+V
Sbjct: 206 VEV 208
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 137 HLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQR 196
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 197 QVEFLSM 203
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERM LQ+LVP NK KAS+LDEII+Y++ LQ
Sbjct: 130 HVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQR 189
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 190 QVEFLSM 196
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRAR+GQAT+ HS+AERLRREKI+ERMK LQ+LVP K T KA MLDEII+YV+ LQ
Sbjct: 173 HVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQR 232
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 233 QVEFLSM 239
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+RARRGQAT+ HS+AER+RREKI+ERM+ LQEL P NK T KA MLDEII+YV+ LQ
Sbjct: 205 HMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQ 264
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 265 QVEFLSM 271
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 168 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 227
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 228 QVEFLSM 234
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
RAR+G A DP SIA R RRE+I++R+K LQELVPNS K D +ML++ I+YVKFLQLQVK
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVK 418
Query: 349 VLSMSRLGAAGAV 361
VL+ +GA
Sbjct: 419 VLTSDDYWPSGAT 431
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 156 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 215
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 216 QVEFLSM 222
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ++VP NK KAS+LDEII+Y++ LQ Q
Sbjct: 50 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 109
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 110 VEFLSM 115
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VRARRG+ATD HS+AER RREKI+ERMK LQ LVP NK KA MLDEII+YV+ LQ
Sbjct: 4 VHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQ 63
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 64 QQVEFLSM 71
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 141 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 200
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 201 QVEFLSM 207
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 7/102 (6%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 74 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 133
Query: 347 VKVLSM------SRLGAAGAVLPLITDGQAEASKGLSLSPQA 382
V+ LSM +R+ V GQ + G++ QA
Sbjct: 134 VEFLSMKLEAVNTRMNPGIEVFASKDFGQTFDTAGMAFGSQA 175
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 128 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 187
Query: 347 VKVLSMSRLGAAG 359
++ LSM +L A G
Sbjct: 188 IEFLSM-KLSAIG 199
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI ERMK LQ+LVP NK KAS+LDEII+YV+ L+ Q
Sbjct: 114 VRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQ 173
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 174 VEFLSM 179
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 205
Query: 347 VKVLSM------SRLGAAGAVLPLITDGQ 369
V+ LSM SRL + P GQ
Sbjct: 206 VEFLSMKLEAVNSRLNSGIEAFPPKDFGQ 234
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 103 GFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 162
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 163 LQNQVEFLSM-RIASLSPVL 181
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 7/83 (8%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 130 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 189
Query: 347 VKVLSM------SRLGAAGAVLP 363
V+ LSM SR+ V P
Sbjct: 190 VEFLSMKLEAVNSRMNPGIEVFP 212
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 265 LPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 324
+ S + S++P G K + RA RG ATDP S+ R RRE+I ER+K LQ LVPN
Sbjct: 236 IASQELNGSSSPKGSAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNG 295
Query: 325 NKTDKASMLDEIIDYVKFLQLQVKVLS 351
K D ++ML+E ++YVKFLQLQ+K+LS
Sbjct: 296 TKVDISTMLEEAVEYVKFLQLQIKLLS 322
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 347 VKVLSM------SRLGAAGAVLPLITDGQ 369
V+ LSM SR+ V P GQ
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFPPKEFGQ 224
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 7/83 (8%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 347 VKVLSM------SRLGAAGAVLP 363
V+ LSM SR+ V P
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFP 218
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 347 VKVLSM------SRLGAAGAVLPLITDGQ 369
V+ LSM SR+ V P GQ
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFPPKEFGQ 224
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 7/83 (8%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 347 VKVLSM------SRLGAAGAVLP 363
V+ LSM SR+ V P
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFP 218
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 138 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 197
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 198 QVEFLSM 204
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 135 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 194
Query: 343 LQLQVKVLSMSRLGAAGAVL 362
LQ QV+ LSM R+ + VL
Sbjct: 195 LQNQVEFLSM-RIASMSPVL 213
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 278 GGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEI 336
G VRA+RGQAT+ HS+AER RREKI ERMK LQ+LVP NK T KA MLDEI
Sbjct: 113 AGAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 172
Query: 337 IDYVKFLQLQVKVLSM 352
I+YV+ LQ QV+ LSM
Sbjct: 173 INYVQSLQRQVEFLSM 188
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 93 VRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQ 152
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSP 380
V+ LSM +L A + + + + SK L L P
Sbjct: 153 VEFLSM-KLEAVNSRINVNPSFEGFHSKDLGLQP 185
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 117 GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQS 176
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 177 LQNQVEFLSM 186
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
RARRG+ATD HS+AER+RREKI++RMK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 251 HFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 310
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 311 QVEFLSM 317
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 107 GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQS 166
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 167 LQNQVEFLSM 176
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 347 VKVLSM------SRLGAAGAVLPLITDGQ 369
V+ LSM SR+ V P GQ
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFPPKEFGQ 224
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 61/101 (60%), Gaps = 27/101 (26%)
Query: 279 GCNGTGKA------------RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
G NG GK VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK
Sbjct: 124 GGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 183
Query: 327 ---------------TDKASMLDEIIDYVKFLQLQVKVLSM 352
T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 184 VAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 224
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ++VP NK T KA +LDEII+Y++ LQ Q
Sbjct: 141 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQ 200
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 187
Query: 347 VKVLSM------SRLGAAGAVLPLIT-DGQAEASKGLSLSPQA 382
V+ LSM SR+ V P D Q + G+ + QA
Sbjct: 188 VEFLSMKLEAVNSRIAPGIEVFPPKDFDQQTFDTTGMPFASQA 230
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 207 VEFLSM 212
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 116 GYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQS 175
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 176 LQNQVEFLSM 185
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 265 LPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 324
+ S + S++P G K + RA RG ATDP S+ R RRE+I ER+K LQ LVPN
Sbjct: 231 IASQELNGSSSPKGSAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNG 290
Query: 325 NKTDKASMLDEIIDYVKFLQLQVKVLS 351
K D ++ML+E ++YVKFLQLQ+K+LS
Sbjct: 291 TKVDISTMLEEAVEYVKFLQLQIKLLS 317
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 265 LPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 324
+ S + S++P G K + RA RG ATDP S+ R RRE+I ER+K LQ LVPN
Sbjct: 232 IASQELNGSSSPKGSAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNG 291
Query: 325 NKTDKASMLDEIIDYVKFLQLQVKVLS 351
K D ++ML+E ++YVKFLQLQ+K+LS
Sbjct: 292 TKVDISTMLEEAVEYVKFLQLQIKLLS 318
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI ERMK LQ+LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 256 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 347 VKV 349
V+V
Sbjct: 316 VEV 318
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 82 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 141
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 142 VEFLSM 147
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ++VP NK KA +LDEII+Y++ LQ Q
Sbjct: 137 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQ 196
Query: 347 VKVLSM------SRLGAAGAVLPLIT-DGQAEASKGLSLSPQA 382
V+ LSM SRL V P D Q + G+ + QA
Sbjct: 197 VEFLSMKLEAVNSRLAPRIEVFPPKDFDQQTFDTTGMPFASQA 239
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRARRGQATD HS++ER+RRE+I+ERM+ LQ LVP +K T KA +LDEII+YV+
Sbjct: 101 GYIHVRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRS 160
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 161 LQNQVEFLSM 170
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 133 VRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 192
Query: 347 VKVLSM 352
+ LSM
Sbjct: 193 AEFLSM 198
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
+RA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 136 VHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQ 195
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 196 RQVEFLSM 203
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
+RARRGQAT+ HS+AER+RREKI+ERM+ LQELVP NK T KA MLDEII+Y++ LQ Q
Sbjct: 48 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQ 107
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 108 VEFLSM 113
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
+RA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 144 VHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQ 203
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 204 RQVEFLSM 211
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VRA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 145 VHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQ 204
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 205 RQVEFLSM 212
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 137 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 196
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 197 QVEFLSM 203
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ++VP NK KA +LDEII+Y++ LQ
Sbjct: 99 HVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQH 158
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 159 QVEFLSM 165
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/66 (71%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP+ +K T KA MLDEII+YV+ LQ Q
Sbjct: 25 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQ 84
Query: 347 VKVLSM 352
++ LSM
Sbjct: 85 IEFLSM 90
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRGQATD HS+AER+RREKI++RM LQ LVP +K T KA +LDEII+YV+
Sbjct: 133 TGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQ 192
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITD 367
LQ QV+ LSM +V P+ D
Sbjct: 193 SLQNQVEFLSMK----LASVNPMFFD 214
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
+RA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 138 VHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQ 197
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 198 RQVEFLSM 205
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 90 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQH 149
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 150 QVEFLSM 156
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
+RA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 104 VHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQ 163
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 164 RQVEFLSM 171
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HSIAER+RR KI ER+K LQ++VP KT A+MLDEII+YV+ LQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDI 388
QV+ LSM +L AA + D +E S+ +A + V++
Sbjct: 206 QVEFLSM-KLTAASSYY----DFNSETDAVESMQAKAREAVEM 243
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD H +AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 151 VRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 144 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 203
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 204 VEFLSM 209
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 124 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 183
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 184 QVEFLSM 190
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 136 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 195
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 196 QVEFLSM 202
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI +RMK LQELVP NK + A +LDEII++V+ LQ
Sbjct: 176 HVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQC 235
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKG 375
QV+ LSM RL A + D A G
Sbjct: 236 QVEFLSM-RLAAVNPRIDFNLDSMLSAESG 264
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 124 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 183
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 184 QVEFLSM 190
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ L
Sbjct: 111 HVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHH 170
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 171 QVEFLSM 177
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+L P NK KA +LDEII+Y++ LQ
Sbjct: 113 HVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQR 172
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 173 QVEFLSM 179
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
AR ++R +A + H+++ER RR++I E+MK LQEL+PNSNKTDKASMLDE I+Y+K LQL
Sbjct: 12 ARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQL 71
Query: 346 QVKVLS 351
Q++VLS
Sbjct: 72 QLQVLS 77
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 140 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 199
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 200 QVEFLSM 206
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 140 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 199
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 200 QVEFLSM 206
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 140 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 199
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 200 QVEFLSM 206
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP NK T KA MLDEII+YV+ LQ
Sbjct: 140 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 199
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 200 QVEFLSM 206
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
AR ++R +A + H+++ER RR++I E+MK LQEL+PNSNKTDKASMLDE I+Y+K LQL
Sbjct: 12 ARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQL 71
Query: 346 QVKVLS 351
Q++VLS
Sbjct: 72 QLQVLS 77
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 89.7 bits (221), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA ML+EII+YV+ LQ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQ 65
Query: 347 VKVLSM 352
++ LSM
Sbjct: 66 IEFLSM 71
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
+RA+RGQAT+ HS+AERLRR+KI+ERMK LQ+LVP +K T KA MLDEII+YV+ LQ
Sbjct: 29 VHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQ 88
Query: 345 LQVKVLSM 352
QV+ LSM
Sbjct: 89 RQVEFLSM 96
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 224 DKILQFDYLSASIVAKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGT 283
D+ F L+AS KGE N P LPT + L ++++ + C
Sbjct: 163 DEAKTFSGLNASEAQKGEPA--NRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPC--- 217
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ + MLD +DY+K
Sbjct: 218 ---KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKD 274
Query: 343 LQLQVKVLSMSR 354
LQ QVK LS +R
Sbjct: 275 LQKQVKTLSDNR 286
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 64/89 (71%), Gaps = 7/89 (7%)
Query: 264 GLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPN 323
GL +L + A+ P GC R ++R +A + H+++E+ RR +I E+MK LQ L+PN
Sbjct: 135 GLEALVEEAAGKP--GC-----GRSSSKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPN 187
Query: 324 SNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
SNKTDKASMLDE I+Y+K LQLQV++LSM
Sbjct: 188 SNKTDKASMLDEAIEYLKQLQLQVQMLSM 216
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
N GK R ARRG ATDP S+ R RREKI ER+K LQ LVPN K D +MLDE I YV
Sbjct: 437 NTNGKPR--ARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYV 494
Query: 341 KFLQLQVKVL 350
+FLQLQV +L
Sbjct: 495 QFLQLQVTLL 504
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + RA +G ATDP S+ R RREKI ER+K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 164 KGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 223
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSL-SPQADQGVDISLNSDQIA 396
LQ+KV + + + +IT Q +S L + +P A G+D+ + + ++
Sbjct: 224 LQIKVCRLLKGFFVFSQNLIITHVQLLSSDDLWMYAPLAYNGLDMGFHHNLLS 276
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GK+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+K L
Sbjct: 273 GKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQL 332
Query: 344 QLQVKVLSMSRLGAAGAVLPLITDGQAEAS 373
Q QV++ MSR+ +LP+ Q + S
Sbjct: 333 QAQVQM--MSRMNIQPVMLPMTMQQQLQMS 360
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
T+++ T N GKAR A RG ATDP S+ R RREKI ER++ LQ LVPN K D +
Sbjct: 183 TSASKSTMSLNSNGKAR--ANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDIS 240
Query: 331 SMLDEIIDYVKFLQLQVKVLS 351
+ML++ I YVKFLQLQ+K+LS
Sbjct: 241 TMLEDAIHYVKFLQLQIKLLS 261
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERMK LQ+L+P NK KA +LDEII+Y++ LQ Q
Sbjct: 140 VRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQ 199
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 200 VEFLSM 205
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 67/97 (69%), Gaps = 8/97 (8%)
Query: 267 SLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
S +++A A T G G+ ++R +A + H+++ER RR++I E+M+ LQEL+PN NK
Sbjct: 348 SEEESAGAKKTAG----GQGGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK 403
Query: 327 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLP 363
DKASMLDE I+Y+K LQLQV+++SM AG +P
Sbjct: 404 VDKASMLDEAIEYLKTLQLQVQIMSM----GAGLYMP 436
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RREKI +MK LQ+LVP NK KA MLDEII+YV+ LQ
Sbjct: 67 HVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQ 126
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 127 QVEFLSM 133
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 277 TGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDE 335
G A VRA+RGQAT+ HS+AER RREKI RMK LQ+LVP NK T KA MLDE
Sbjct: 143 AAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDE 202
Query: 336 IIDYVKFLQLQVKVLSM 352
II+YV+ LQ QV+ LSM
Sbjct: 203 IINYVQSLQRQVEFLSM 219
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+ERM LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 84 VRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQ 143
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 144 VEFLSM 149
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++RG+A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 376
Query: 350 LSMSRLGAAGAVLP 363
+SM AG +P
Sbjct: 377 MSM----GAGMYMP 386
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++RG+A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 376
Query: 350 LSMSRLGAAGAVLP 363
+SM AG +P
Sbjct: 377 MSM----GAGMYMP 386
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++RG+A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 376
Query: 350 LSMSRLGAAGAVLP 363
+SM AG +P
Sbjct: 377 MSM----GAGMYMP 386
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++RG+A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 376
Query: 350 LSMSRLGAAGAVLP 363
+SM AG +P
Sbjct: 377 MSM----GAGMYMP 386
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++RG+A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 376
Query: 350 LSMSRLGAAGAVLP 363
+SM AG +P
Sbjct: 377 MSM----GAGIYMP 386
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
T+++ T N GKAR A RG ATDP S+ R RREKI ER++ LQ LVPN K D +
Sbjct: 169 TSASKSTMSLNSNGKAR--ANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDIS 226
Query: 331 SMLDEIIDYVKFLQLQVKVLS 351
+ML++ I YVKFLQLQ+K+LS
Sbjct: 227 TMLEDAIHYVKFLQLQIKLLS 247
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 277 TGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDE 335
G A VRA+RGQAT+ HS+AER RREKI RMK LQ+LVP NK T KA MLDE
Sbjct: 143 AAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDE 202
Query: 336 IIDYVKFLQLQVKVLSM 352
II+YV+ LQ QV+ LSM
Sbjct: 203 IINYVQSLQRQVEFLSM 219
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT A MLDEII+YV+ LQ
Sbjct: 151 VHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQ 210
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAE 371
QV+ LSM +L AA + +D AE
Sbjct: 211 NQVEFLSM-KLTAASSYHDFNSDSDAE 236
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 8/95 (8%)
Query: 269 QQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD 328
+++A A T G G+ ++R +A + H+++ER RR++I E+M+ LQEL+PN NK D
Sbjct: 414 EESAGAKKTAG----GRGGAGSKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVD 469
Query: 329 KASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLP 363
KASMLDE I+Y+K LQLQV+++SM AG +P
Sbjct: 470 KASMLDEAIEYLKTLQLQVQIMSM----GAGLYMP 500
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T K + RA RG ATDP S+ R RRE+I ER+K LQ LVPN K D ++ML+E + YVKF
Sbjct: 211 TSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 270
Query: 343 LQLQVKVLS 351
LQLQ+K+LS
Sbjct: 271 LQLQIKLLS 279
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HSIAER+RR KI ER+K LQ++VP KT A+MLDEII+YV+ LQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQA 370
QV+ LSM +L AA + ++ A
Sbjct: 206 QVEFLSM-KLTAASSYYDFNSETDA 229
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 277 TGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEI 336
TG C K + RA RG +TDP S+ R RRE+I ER+K LQ LVPN K D ++ML+E
Sbjct: 207 TGVCP---KGKARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEA 263
Query: 337 IDYVKFLQLQVKVLS 351
+ YVKFLQLQ+KVLS
Sbjct: 264 VHYVKFLQLQIKVLS 278
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 51/71 (71%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + R+ RG ATDP SI R RREKI ER+K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 243 KGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 302
Query: 345 LQVKVLSMSRL 355
LQ+K+LS L
Sbjct: 303 LQIKLLSSDDL 313
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HSIAER+RR KI ER+K LQ++VP KT A+MLDEII+YV+ LQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQA 370
QV+ LSM +L AA + ++ A
Sbjct: 195 QVEFLSM-KLTAASSYYDFNSETDA 218
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 48/65 (73%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ RA+RG ATDP S+ R RREKI ER+KNLQ LVPN K D +MLDE I YVKFLQ
Sbjct: 440 GKPRAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQT 499
Query: 346 QVKVL 350
QV++L
Sbjct: 500 QVELL 504
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
+RAR GQAT+ HS+AER+RREKI+ERMK LQ+LVP +K KA MLDEII+YV+ LQ
Sbjct: 264 HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQR 323
Query: 346 QVKVLSMSRLGAAGAVL 362
QV+ LSM +L A L
Sbjct: 324 QVEFLSM-KLSAVNPAL 339
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
+RAR GQAT+ HS+AER+RREKI+ERMK LQ+LVP +K KA MLDEII+YV+ LQ
Sbjct: 262 HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQR 321
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 322 QVEFLSM 328
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GK+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+K L
Sbjct: 260 GKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQL 319
Query: 344 QLQVKVLSMSRLGAAGAVLPL 364
Q QV++ M+R+ + +LPL
Sbjct: 320 QAQVQM--MNRINMSSMMLPL 338
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
+RAR GQAT+ HS+AER+RREKI+ERMK LQ+LVP +K KA MLDEII+YV+ LQ
Sbjct: 262 HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQR 321
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 322 QVEFLSM 328
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KAS+LDEII+Y++ LQ
Sbjct: 127 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQH 186
Query: 346 QVKVL 350
QV+ +
Sbjct: 187 QVEFM 191
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
G VRAR QAT+ HSIAE+LRREKI+ERMK LQ+LVP +K T KA MLDEII+YV+
Sbjct: 144 GYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 203
Query: 343 LQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 204 LQRQVEFLSM 213
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LD II+YV+ LQ
Sbjct: 98 HVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQR 157
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 158 QVEFLSM 164
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI+ERMK LQ++VP NK KA +LDEII+Y++ LQ
Sbjct: 99 HVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQH 158
Query: 346 QVKVLSM 352
QV+ L M
Sbjct: 159 QVEFLFM 165
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HSIAER+RR KI ER+K LQ++VP KT A+MLDEII+YV+ LQ
Sbjct: 147 VHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQ 206
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQA 370
QV+ LSM +L AA + ++ A
Sbjct: 207 NQVEFLSM-KLTAASSYYDFNSETDA 231
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
A A P GG ++R +A + H+++E+ RR KI E+MK LQ L+PNSNKTDKA
Sbjct: 11 AAGARPRGGSG--------SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKA 62
Query: 331 SMLDEIIDYVKFLQLQVKVLSM 352
SMLDE I+Y+K LQLQV++LSM
Sbjct: 63 SMLDEAIEYLKQLQLQVQMLSM 84
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
RAR+G A DP SIA R RRE+I++R+K LQELVPNS K D +ML++ I+YVKFLQLQVK
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVK 418
Query: 349 V 349
V
Sbjct: 419 V 419
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRG+ATD HS+AER RREKI+++MK LQ++VP K T KA MLDEII+YV+ LQ
Sbjct: 140 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQ 199
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 200 QVEFLSM 206
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
+G VRARRG+ATD HS+AER RREKI+ERMK LQ LVP +K K +LDEII+YVK
Sbjct: 103 SGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVK 162
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITDGQA 370
LQ QV+ L +G ++ P++ +A
Sbjct: 163 SLQNQVEFL----VGKLASISPMLIGHEA 187
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 10/104 (9%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VR+RRGQATD HS+AER RRE+I ERMK LQ+LVP NK KA LDEII+Y++ LQ Q
Sbjct: 143 VRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQ 202
Query: 347 VKVLSM------SRLGAAGAV---LPLITDGQAEASKGLSLSPQ 381
V+ LSM SR+ + A+ P Q + G+ PQ
Sbjct: 203 VEFLSMKLEAVNSRMSTSPAIEGLHPKDLGAQPFDATGMIFGPQ 246
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
N + K + RA RG ATDP S+ R RRE+I ER++ LQ+LVPN K D ++ML+E + YV
Sbjct: 230 NASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYV 289
Query: 341 KFLQLQVKVLSMSRL 355
KFLQLQ+K+LS L
Sbjct: 290 KFLQLQIKLLSSDDL 304
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
N + K + RA RG ATDP S+ R RRE+I ER++ LQ+LVPN K D ++ML+E + YV
Sbjct: 230 NASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYV 289
Query: 341 KFLQLQVKVLSMSRL 355
KFLQLQ+K+LS L
Sbjct: 290 KFLQLQIKLLSSDDL 304
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + RA +G ATDP S+ R RREKI ER+K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 164 KGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 223
Query: 345 LQVKVLS 351
LQ+K+LS
Sbjct: 224 LQIKLLS 230
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Query: 272 ASANPTGGCNGT-----GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
AS + GG N + G + RA RG ATDP S+ R RRE+I ER++ LQ LVPN K
Sbjct: 163 ASLDQNGGANNSRSSLNGANKSRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTK 222
Query: 327 TDKASMLDEIIDYVKFLQLQVKVLS 351
D ++ML+E + YVKFLQLQ+K+LS
Sbjct: 223 VDISTMLEEAVQYVKFLQLQIKLLS 247
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
+G VRARRG+ATD HS+AER RREKI+ERMK LQ LVP +K K +LDEII+YVK
Sbjct: 37 SGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVK 96
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITDGQA 370
LQ QV+ L +G ++ P++ +A
Sbjct: 97 SLQNQVEFL----VGKLASISPMLIGHEA 121
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
A P NG + RA+RG ATDP S+ R RRE+I ER+K LQ LVPN K D +ML
Sbjct: 201 AGPALNTNG----KPRAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTML 256
Query: 334 DEIIDYVKFLQLQVKVLS 351
+E I YVKFLQLQV +LS
Sbjct: 257 EEAIHYVKFLQLQVNMLS 274
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
T KA RA RG ATDP S+ R RRE+I ER++ LQ+LVPN K D ++ML+E YVK
Sbjct: 184 STKKAYTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVK 243
Query: 342 FLQLQVKVLS 351
FLQLQ+K+LS
Sbjct: 244 FLQLQIKLLS 253
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
+G VRARRG+ATD HS+AER RREKI+ERMK LQ LVP +K K +LDEII+YVK
Sbjct: 103 SGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVK 162
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITDGQA 370
LQ QV+ L +G ++ P++ +A
Sbjct: 163 SLQNQVEFL----VGKLASISPMLIGHEA 187
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQLQV++
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQM 388
Query: 350 LSMSRLGAAGAVLP 363
+ M G+AG P
Sbjct: 389 MWM---GSAGIAAP 399
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + RA +G ATDP S+ R RREKI ER+K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 164 KGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 223
Query: 345 LQVKVLS 351
LQ+K+LS
Sbjct: 224 LQIKLLS 230
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
A A P GG ++R +A + H+++E+ RR KI E+MK LQ L+PNSNKTDKA
Sbjct: 88 AAGARPRGGSG--------SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKA 139
Query: 331 SMLDEIIDYVKFLQLQVKVLSM 352
SMLDE I+Y+K LQLQV++LSM
Sbjct: 140 SMLDEAIEYLKQLQLQVQMLSM 161
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQLQV++
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQM 388
Query: 350 LSMSRLGAAGAVLP 363
+ M G+AG P
Sbjct: 389 MWM---GSAGIAAP 399
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
+G VRARRG+ATD HS+AER RREKI+ERMK LQ LVP +K K +LDEII+YVK
Sbjct: 103 SGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVK 162
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITDGQA 370
LQ QV+ L +G ++ P++ +A
Sbjct: 163 SLQNQVEFL----VGKLASISPMLIGHEA 187
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 9/82 (10%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
GTG R RA + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 458 GTGSKRSRA-----AEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 512
Query: 342 FLQLQVKVLSMSRLGAAGAVLP 363
LQLQV+++SM AG +P
Sbjct: 513 TLQLQVQIMSM----GAGLYMP 530
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
A A P GG ++R +A + H+++E+ RR KI E+MK LQ L+PNSNKTDKA
Sbjct: 88 AAGARPRGGSG--------SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKA 139
Query: 331 SMLDEIIDYVKFLQLQVKVLSM 352
SMLDE I+Y+K LQLQV++LSM
Sbjct: 140 SMLDEAIEYLKQLQLQVQMLSM 161
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER RREKI RMK LQELVP NK + A +LDEII++V+ LQ
Sbjct: 199 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQ 258
Query: 345 LQVKVLSMSRLGAA 358
QV+ LSM RL A
Sbjct: 259 RQVEFLSM-RLAAV 271
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRA+RGQATD HS+AER+RREKI ER+K LQ+LVP K A MLD IIDYV+ LQ
Sbjct: 102 VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQ 161
Query: 345 LQVKVLSMSRLGAAGAVLPL 364
Q++ LSM +L AA A L
Sbjct: 162 NQIEFLSM-KLSAASACYDL 180
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRA+RGQATD HS+AER+RREKI ER+K LQ+LVP K A MLD IIDYV+ LQ
Sbjct: 102 VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQ 161
Query: 345 LQVKVLSMSRLGAAGAVLPL 364
Q++ LSM +L AA A L
Sbjct: 162 NQIEFLSM-KLSAASACYDL 180
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRAR+GQATD HS+ ER+RREKI+ERMK LQ LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 132 VRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIINYVQSLQRQ 191
Query: 347 VKV 349
V+V
Sbjct: 192 VEV 194
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRG+ATD HS+AER+RREKI+ RMK LQ LVP +K T KA +LDEII YV+
Sbjct: 156 TGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQ 215
Query: 342 FLQLQVKV 349
FL+ +V+V
Sbjct: 216 FLKDRVQV 223
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/62 (72%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP K T KA MLDEII+YV+ LQ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 347 VK 348
V+
Sbjct: 61 VE 62
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%), Gaps = 4/83 (4%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
G+ ++R +A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 457 AGRGVAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT 516
Query: 343 LQLQVKVLSMSRLGAAGAVLPLI 365
LQLQV+++SM AG +P +
Sbjct: 517 LQLQVQMMSM----GAGLYMPQM 535
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VR RRGQATD HS+AER RREKI RMK LQELVP NK + A +LD+II++V+ LQ
Sbjct: 158 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQ 217
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSL 378
+V++LSM +L A ++ D A++G+SL
Sbjct: 218 HEVEILSM-KLAAVNPIIDFNLDSIL-AAEGMSL 249
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 57/74 (77%), Gaps = 4/74 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 512
Query: 350 LSMSRLGAAGAVLP 363
+SM AG +P
Sbjct: 513 MSM----GAGLYMP 522
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 60/106 (56%), Gaps = 20/106 (18%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E ++YVKFLQL
Sbjct: 262 GKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQL 321
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLN 391
Q+K+LS L +P A G+DI LN
Sbjct: 322 QIKLLSSDDLWM--------------------YAPFAHNGLDIGLN 347
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRA+RGQATD HS+AER+RREKI ER+K LQ+LVP K A MLD IIDYV+ LQ Q
Sbjct: 47 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 106
Query: 347 VKVLSMSRLGAAGAVLPL 364
++ LSM +L AA A L
Sbjct: 107 IEFLSM-KLSAASACYDL 123
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
G + + ++R ++ + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 342 FLQLQVKVLSMSRLGAAGAVLP 363
LQLQV+++SM A+G LP
Sbjct: 391 SLQLQVQIMSM----ASGYYLP 408
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 275 NPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
+P+ N GK RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+
Sbjct: 255 DPSKALNLNGK--TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLE 312
Query: 335 EIIDYVKFLQLQVKVLS 351
E + YVKFLQLQ+K+LS
Sbjct: 313 EAVHYVKFLQLQIKLLS 329
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 273 SANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM 332
S+ T N +GK RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++M
Sbjct: 251 SSKGTATLNSSGK--TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTM 308
Query: 333 LDEIIDYVKFLQLQVKVLSMSRL 355
L+E + YVKFLQLQ+K+LS L
Sbjct: 309 LEEAVQYVKFLQLQIKLLSSEDL 331
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 20/207 (9%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T + R ++R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K
Sbjct: 114 TVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 173
Query: 343 LQLQVKVLSMSR-LGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEV 401
LQLQV++L+M L LP + G+S + G ++ NS AF E
Sbjct: 174 LQLQVQMLTMRNGLSLHPMCLPGVLQPMQLPLTGMSFD---EGGGLLNTNSATGAFSEND 230
Query: 402 VKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEENKFCFSNGLVQSNSS 461
ES+ + + PI L S+ + S E F F L+Q++
Sbjct: 231 ----ESSAQATLSLPNRCAVSNQPIIL--------PSTRNITSSETPFGF-EPLIQASGE 277
Query: 462 S---ASSNSSLPNNGINQMPLNTNIII 485
++S+ + G Q PL+TN +
Sbjct: 278 PFNLSTSSKDICREGTAQPPLDTNQTV 304
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RMK LQELVP NK + A +LDEII +V+ LQ
Sbjct: 196 HVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQR 255
Query: 346 QVKVLSMSRLGA 357
QV+ LSM RL A
Sbjct: 256 QVEFLSM-RLAA 266
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 275 NPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
+P+ N GK RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+
Sbjct: 255 DPSKALNLNGK--TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLE 312
Query: 335 EIIDYVKFLQLQVKVLS 351
E + YVKFLQLQ+K+LS
Sbjct: 313 EAVHYVKFLQLQIKLLS 329
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 275 NPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
+P+ N GK RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+
Sbjct: 252 DPSKALNLNGK--TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLE 309
Query: 335 EIIDYVKFLQLQVKVLS 351
E + YVKFLQLQ+K+LS
Sbjct: 310 EAVHYVKFLQLQIKLLS 326
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN K T+ + MLD +DY+K LQ+
Sbjct: 323 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQM 382
Query: 346 QVKVLSMSRLG 356
QVKV++ R G
Sbjct: 383 QVKVMNDGRAG 393
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
+RA RG AT P SIAER+RR KI+ERMK LQELVPNS++ T+ A MLD+ ++YVK LQLQ
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 347 VKVLS 351
V+ L+
Sbjct: 439 VQELT 443
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 57/74 (77%), Gaps = 4/74 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 517
Query: 350 LSMSRLGAAGAVLP 363
+SM AG +P
Sbjct: 518 MSM----GAGLFMP 527
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K LQL
Sbjct: 39 ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQL 98
Query: 346 QVKVLSM 352
QV++LSM
Sbjct: 99 QVQMLSM 105
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 224 DKILQFDYLSASIVAKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGT 283
D+ F L+AS KGE N P LPT + L ++++ + C
Sbjct: 306 DEAKTFSGLNASEAQKGEPA--NRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPC--- 360
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKF 342
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ + MLD +DY+K
Sbjct: 361 ---KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKD 417
Query: 343 LQLQVK 348
LQ QVK
Sbjct: 418 LQKQVK 423
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 65/122 (53%), Gaps = 22/122 (18%)
Query: 270 QTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDK 329
Q + + +G N GK RA RG ATDP S+ R RRE+I ER+K LQ LVPN K D
Sbjct: 256 QDSDSKVSGVLNSNGK--TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKVDI 313
Query: 330 ASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDIS 389
++ML+E + YV FLQLQ+K+LS L +P A G+DI
Sbjct: 314 STMLEEAVHYVNFLQLQIKLLSSDDLWM--------------------YAPLAYNGIDIG 353
Query: 390 LN 391
LN
Sbjct: 354 LN 355
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+MK LQEL+P+ NKTDKASMLDE I+Y+K LQ+QV++
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQM 321
Query: 350 LSMSRLGAAGAVL 362
+ M A AV+
Sbjct: 322 MWMGSGMAPPAVM 334
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K LQL
Sbjct: 37 ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQL 96
Query: 346 QVKVLSM 352
QV++LSM
Sbjct: 97 QVQMLSM 103
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K LQL
Sbjct: 37 ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQL 96
Query: 346 QVKVLSM 352
QV++LSM
Sbjct: 97 QVQMLSM 103
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T K R +R +A + H+++ER RR++I E+M+ LQEL+PNSNKTDKASMLDE I+Y+K
Sbjct: 6 TKKPATRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKM 65
Query: 343 LQLQVKV 349
LQLQ++V
Sbjct: 66 LQLQLQV 72
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 47/62 (75%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
+ Q ++ GG + RVRARRGQATDPHSIAERLRRE+IAERMK LQELVPN+NK
Sbjct: 221 MNQPQASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
Query: 328 DK 329
+
Sbjct: 281 KQ 282
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+++ER RR++I E+MK LQEL+P SNK+DKASMLDE IDY+K LQLQV+++
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMM 314
Query: 351 SMSRLGAAGAVLPLI 365
SM G + P I
Sbjct: 315 SMG-CGMVPMMFPGI 328
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%), Gaps = 5/71 (7%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
GTG ++R +A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 455 GTG-----SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 509
Query: 342 FLQLQVKVLSM 352
LQLQV+++SM
Sbjct: 510 TLQLQVQIMSM 520
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
G VRA+RGQA D HS+AER+RREKI+E+M LQ LVP +K T KA MLDEII YV+
Sbjct: 152 AGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQ 211
Query: 342 FLQLQVKVLSM 352
LQ QV+ LSM
Sbjct: 212 SLQNQVEFLSM 222
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 54/71 (76%), Gaps = 5/71 (7%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
GTG R RA + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 319 GTGSKRSRA-----AEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 373
Query: 342 FLQLQVKVLSM 352
LQLQV+++SM
Sbjct: 374 TLQLQVQIMSM 384
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+E+M LQ+++P NK KA +LDEII+Y++ LQ Q
Sbjct: 154 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 213
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 214 VEFLSM 219
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI+E+M LQ+++P NK KA +LDEII+Y++ LQ Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 347 VKVLSM 352
V+ LSM
Sbjct: 213 VEFLSM 218
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
R RA+RG AT P SIAER+RR KI+ERMK LQ+LVP+ +K T+ + MLDE ++YVK LQ
Sbjct: 382 RTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQR 441
Query: 346 QVKVLS--MSRLGAAGA 360
QV+ LS + RL AA A
Sbjct: 442 QVQELSDTVVRLEAAAA 458
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+RG+ + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM- 379
Query: 351 SMSRLGAAGAVLP 363
MS +G AG +P
Sbjct: 380 -MSTMGTAGMCMP 391
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%)
Query: 278 GGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEII 337
G R R +R +A + H+++E+ RR KI E+MK LQ LVPNS+KTDKASMLD+ I
Sbjct: 34 GSSESEPAGRPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAI 93
Query: 338 DYVKFLQLQVKVLSM 352
+Y+K LQLQV++LSM
Sbjct: 94 EYLKHLQLQVQMLSM 108
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
T+ + + N GK RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D +
Sbjct: 272 TSESKGSAALNSNGK--TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDIS 329
Query: 331 SMLDEIIDYVKFLQLQVKVLS 351
+ML+E + YVKFLQLQ+K+LS
Sbjct: 330 TMLEEAVHYVKFLQLQIKLLS 350
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
G + + ++R ++ + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 329 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 388
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLI 365
LQLQV+++SM A+G +P +
Sbjct: 389 SLQLQVQIMSM----ASGYYMPPV 408
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 50/70 (71%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ RA RG ATDP SI R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQL
Sbjct: 205 GKTRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 264
Query: 346 QVKVLSMSRL 355
Q+K+LS L
Sbjct: 265 QIKLLSSDDL 274
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+RG+ + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM- 379
Query: 351 SMSRLGAAGAVLP 363
MS +G AG +P
Sbjct: 380 -MSTMGTAGMCMP 391
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%), Gaps = 5/71 (7%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
GTG ++R +A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 440 GTG-----SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 494
Query: 342 FLQLQVKVLSM 352
LQLQV+++SM
Sbjct: 495 TLQLQVQIMSM 505
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQLQV++
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQM 383
Query: 350 LSM-SRLGAAGAVL 362
+ M S + A AV+
Sbjct: 384 MWMGSGIAAPPAVM 397
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%)
Query: 272 ASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKAS 331
AS +GG + RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++
Sbjct: 258 ASQENSGGTTLNSNGKTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDIST 317
Query: 332 MLDEIIDYVKFLQLQVKVLSM 352
ML+E ++YVKFLQ Q+KV ++
Sbjct: 318 MLEEAVNYVKFLQTQIKVCTI 338
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
T+ + + N GK RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D +
Sbjct: 272 TSESKGSAALNSNGK--TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDIS 329
Query: 331 SMLDEIIDYVKFLQLQVKVLS 351
+ML+E + YVKFLQLQ+K+LS
Sbjct: 330 TMLEEAVHYVKFLQLQIKLLS 350
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI ER++ LQ++VP K A+MLDEII+YV+ LQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQA 370
QV+ LSM +L AA + ++ A
Sbjct: 1086 NQVEFLSM-KLNAASSFYDFSSETDA 1110
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 16/107 (14%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQL
Sbjct: 235 GKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQL 294
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNS 392
Q+K+LS L P+ +G D G+D+ LN+
Sbjct: 295 QIKLLSSDDL---WMYAPIAYNGM-------------DIGLDLKLNA 325
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
G + + ++R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K
Sbjct: 331 GPSRTGLGSKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 342 FLQLQVKVLSMSRLGAAGAVLP 363
LQLQV+++SM A+G LP
Sbjct: 391 SLQLQVQIMSM----ASGYYLP 408
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+RG+ + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM- 383
Query: 351 SMSRLGAAGAVLP 363
MS +G AG +P
Sbjct: 384 -MSTMGTAGMCMP 395
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQL
Sbjct: 263 GKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 322
Query: 346 QVKVLS 351
Q+K+LS
Sbjct: 323 QIKLLS 328
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 271 TASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
T+ + + N GK R A RG ATDP S+ R RRE+I ER++ LQ LVPN K D +
Sbjct: 78 TSESKGSAALNSNGKTR--ASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDIS 135
Query: 331 SMLDEIIDYVKFLQLQVKVLS 351
+ML+E + YVKFLQLQ+K+LS
Sbjct: 136 TMLEEAVHYVKFLQLQIKLLS 156
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 16/107 (14%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQL
Sbjct: 235 GKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQL 294
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNS 392
Q+K+LS L P+ +G D G+D+ LN+
Sbjct: 295 QIKLLSSDDL---WMYAPIAYNGM-------------DIGLDLKLNA 325
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R ++R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQ
Sbjct: 167 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 226
Query: 347 VKVLSM 352
V++LSM
Sbjct: 227 VQMLSM 232
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
RA++G A DP SIA R RRE+I++R+K LQEL+PN +K D +ML++ I+YVKFLQLQVK
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVK 468
Query: 349 VL 350
VL
Sbjct: 469 VL 470
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RMK LQELVP +K A +LDEII++V+ LQ
Sbjct: 184 HVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQR 243
Query: 346 QVKVLSMSRLGA 357
QV++LSM RL A
Sbjct: 244 QVEMLSM-RLAA 254
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI ER++ L+++VP KT A MLDEII+YV+ LQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQ 205
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQA 370
QV+ LSM +L AA + ++ A
Sbjct: 206 NQVEFLSM-KLAAASSFYDFNSEADA 230
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
RA++G A DP SIA R RRE+I++R+K LQEL+PN +K D +ML++ I+YVKFLQLQVK
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVK 468
Query: 349 VL 350
VL
Sbjct: 469 VL 470
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RMK LQELVP +K A +LDEII++V+ LQ
Sbjct: 199 HVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQR 258
Query: 346 QVKVLSMSRLGA 357
QV++LSM RL A
Sbjct: 259 QVEMLSM-RLAA 269
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 279 GCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIID 338
G + +A RR ++ D H+ +ER RR++I E+++ LQEL+PN KTDK SMLDE ID
Sbjct: 4 GSSAPRRATPPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAID 63
Query: 339 YVKFLQLQVKVLSMSRLGAAGAVLP 363
Y+K LQLQ+++L M + G V+P
Sbjct: 64 YLKSLQLQLQMLVMGKGGGMAPVVP 88
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+ +ER RR++I E+M+ LQEL+PNSNKTDKASMLDE IDY+K LQLQ++++
Sbjct: 731 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMM 790
Query: 351 SMSRLGAAGAVLP 363
S+ G LP
Sbjct: 791 SIR----TGMTLP 799
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R ++R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQ
Sbjct: 167 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 226
Query: 347 VKVLSM 352
V++LSM
Sbjct: 227 VQMLSM 232
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 306 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQE 365
Query: 346 QVKVLSMSR 354
QVKV++ SR
Sbjct: 366 QVKVINESR 374
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RMK LQELVP +K A +LDEII++V+ LQ
Sbjct: 203 HVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQR 262
Query: 346 QVKVLSMSRLGA 357
QV++LSM RL A
Sbjct: 263 QVEMLSM-RLAA 273
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RMK LQELVP +K A +LDEII++V+ LQ
Sbjct: 203 HVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQR 262
Query: 346 QVKVLSMSRLGA 357
QV++LSM RL A
Sbjct: 263 QVEMLSM-RLAA 273
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 299 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQE 358
Query: 346 QVKVLSMSR 354
QVKV++ SR
Sbjct: 359 QVKVINESR 367
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN K T+ A MLD +DY+K LQ
Sbjct: 324 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQK 383
Query: 346 QVKVLSMSR 354
QVKVL+ R
Sbjct: 384 QVKVLNDGR 392
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 234 KGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQ 293
Query: 345 LQVKVLSMSRL 355
LQ+K+LS L
Sbjct: 294 LQIKLLSSDDL 304
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK--TDKASMLDEIIDYVKFL 343
+VRA+RG AT P SIAER+RR +I+ERM+ LQELVPNS+K + A MLDE ++YVK L
Sbjct: 466 CKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSL 525
Query: 344 QLQVKVLSMSR 354
Q QV+ L+ +R
Sbjct: 526 QKQVQELAENR 536
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K
Sbjct: 21 TRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQ 80
Query: 343 LQLQVKVLSM 352
LQLQV++LSM
Sbjct: 81 LQLQVQMLSM 90
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+R +R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQL
Sbjct: 176 SRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 235
Query: 346 QVKVLSM 352
QV++LSM
Sbjct: 236 QVQMLSM 242
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER+RR KI ER++ LQ++VP K A+MLDEII+YV+ LQ
Sbjct: 144 HVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQN 203
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQA 370
QV+ LSM +L AA + ++ A
Sbjct: 204 QVEFLSM-KLTAASSFYDFNSETDA 227
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 53/63 (84%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 451 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQM 510
Query: 350 LSM 352
+SM
Sbjct: 511 MSM 513
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 22/111 (19%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
N GK RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E ++YV
Sbjct: 256 NSNGK--TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYV 313
Query: 341 KFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLN 391
KFLQLQ+K+LS L +P A G+DI LN
Sbjct: 314 KFLQLQIKLLSSDDLWM--------------------YAPLAYNGLDIGLN 344
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GK+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+K L
Sbjct: 203 GKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQL 262
Query: 344 QLQVKVLS 351
Q QV ++S
Sbjct: 263 QAQVSMMS 270
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R ++R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQ
Sbjct: 132 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 191
Query: 347 VKVLSM 352
V++LSM
Sbjct: 192 VQMLSM 197
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN K T+ A MLD +DY+K LQ
Sbjct: 159 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQK 218
Query: 346 QVKVLSMSR 354
QVKVL+ R
Sbjct: 219 QVKVLNDGR 227
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+++ER RR++I E+MK LQEL+P SNK+DKASMLDE IDY+K LQLQV+ +
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRV 314
Query: 351 SMSRLGAAG-AVLPLITDG 368
+ ++ + G ++P++ G
Sbjct: 315 QLMQMMSMGCGMVPMMFPG 333
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K
Sbjct: 43 TRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQ 102
Query: 343 LQLQVKVLSM 352
LQLQV++LSM
Sbjct: 103 LQLQVQMLSM 112
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN K T+ A MLD +DY+K LQ
Sbjct: 318 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQK 377
Query: 346 QVKVLSMSR 354
QVKVL+ SR
Sbjct: 378 QVKVLNDSR 386
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 56/70 (80%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K
Sbjct: 43 TRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQ 102
Query: 343 LQLQVKVLSM 352
LQLQV++LSM
Sbjct: 103 LQLQVQMLSM 112
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
A GG N + RA RG ATDP S+ R RRE+I ER++ LQ+LVPN K D ++ML
Sbjct: 227 ATSDGGVN----RKSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML 282
Query: 334 DEIIDYVKFLQLQVKVLS 351
+E + YVKFLQLQ+K+LS
Sbjct: 283 EEAVHYVKFLQLQIKLLS 300
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RMK LQELVP +K A +LDEII++V+ LQ
Sbjct: 183 HVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQR 242
Query: 346 QVKVLSMSRLGA 357
QV++LSM RL A
Sbjct: 243 QVEMLSM-RLAA 253
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GK+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+K L
Sbjct: 203 GKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQL 262
Query: 344 QLQVKVLS 351
Q QV ++S
Sbjct: 263 QAQVSMMS 270
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN K T+ A MLD +DY+K LQ
Sbjct: 317 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQK 376
Query: 346 QVKVLSMSR 354
QVKVL+ SR
Sbjct: 377 QVKVLNDSR 385
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 184 KMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQ 243
Query: 345 LQVKVLS 351
LQ+K+LS
Sbjct: 244 LQIKLLS 250
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
+Q A+ GG G K++ +A DP S+A ++RREKIAE++K LQ+LVPN K
Sbjct: 176 VQAAAAKKQCGG--GARKSKAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKV 233
Query: 328 DKASMLDEIIDYVKFLQLQVKVLSMSRL 355
D +ML++ I YVKFLQLQVKVL+
Sbjct: 234 DLVTMLEKAITYVKFLQLQVKVLAADEF 261
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 184 KMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQ 243
Query: 345 LQVKVLS 351
LQ+K+LS
Sbjct: 244 LQIKLLS 250
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI ER++ LQ++VP K A+MLDEII+YV+ LQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 345 LQVKVLSMSRLGAAGAV 361
QV+ LSM +L AA +
Sbjct: 1097 NQVEFLSM-KLTAASSF 1112
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRG+ATDPHS+AER+RR+KI+ RMK LQ LVP +K T KA +LDEII +V
Sbjct: 159 TGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRHVL 218
Query: 342 FLQLQVKVLS 351
LQ QV+ L+
Sbjct: 219 SLQNQVEFLA 228
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM-LDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RMK LQELVP +K + LDEII++V+ LQ
Sbjct: 184 HVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQR 243
Query: 346 QVKVLSMSRLGA 357
QV++LSM RL A
Sbjct: 244 QVEMLSM-RLAA 254
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 12/98 (12%)
Query: 266 PSLQQTASANPTGGCN------------GTGKARVRARRGQATDPHSIAERLRREKIAER 313
P+ Q T+S + CN T + RA RG ATDP S+ R RRE+I ER
Sbjct: 213 PNGQCTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINER 272
Query: 314 MKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
++ LQ LVPN K D ++ML+E + YVKFLQLQ+K+LS
Sbjct: 273 LRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 310
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 283 TGKARVRA---RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
T +ARV +R +A + H+++ER RR++I ERMK LQEL+P NK+DKASMLDE I+Y
Sbjct: 199 TKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEY 258
Query: 340 VKFLQLQVKVLSM 352
+K LQLQ++++SM
Sbjct: 259 MKSLQLQIQMMSM 271
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT A MLDEII+YV+ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 216
Query: 347 VKVLSMSRLGAAGAVLPLITDGQA 370
V+ LSM +L AA + +A
Sbjct: 217 VEFLSM-KLTAASTFYDFNAETEA 239
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K LQL
Sbjct: 38 ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQL 97
Query: 346 QVKVLSM 352
QV++LSM
Sbjct: 98 QVQMLSM 104
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN K T+ A MLD +DY+K LQ
Sbjct: 296 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQK 355
Query: 346 QVKVLSMSR 354
QVKVL+ SR
Sbjct: 356 QVKVLNDSR 364
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT A MLDEII+YV+ LQ Q
Sbjct: 147 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 206
Query: 347 VKVLSMSRLGAAGAVLPLITD 367
V+ LSM +L AA +D
Sbjct: 207 VEFLSM-KLTAASQYYDFNSD 226
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 283 TGKARVRA---RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
T +ARV +R +A + H+++ER RR++I ERMK LQEL+P NK+DKASMLDE I+Y
Sbjct: 199 TKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEY 258
Query: 340 VKFLQLQVKVLSM 352
+K LQLQ++++SM
Sbjct: 259 MKSLQLQIQMMSM 271
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 7/89 (7%)
Query: 264 GLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPN 323
GL L A A PT +R ++R +A + H+++E+ RR +I E+MK LQ L+PN
Sbjct: 123 GLEGLILEAPAKPT-------TSRNPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPN 175
Query: 324 SNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
SNKTDKASMLDE I+Y+K LQLQV++L+M
Sbjct: 176 SNKTDKASMLDEAIEYLKQLQLQVQMLTM 204
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
R+RA+RG AT P SIAER+RR +I+ERM+ LQ+LVPN +K T+ A MLD +DY+K LQ
Sbjct: 280 CRIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQ 339
Query: 345 LQVKVLSMSR 354
Q K LS +R
Sbjct: 340 KQFKTLSDNR 349
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 283 TGKARVRA---RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
T +ARV +R +A + H+++ER RR++I ERMK LQEL+P NK+DKASMLDE I+Y
Sbjct: 270 TKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEY 329
Query: 340 VKFLQLQVKVLSM 352
+K LQLQ++++SM
Sbjct: 330 MKSLQLQIQMMSM 342
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+++E+ RR KI E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++L
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 161
Query: 351 SM 352
SM
Sbjct: 162 SM 163
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 283 TGKARVRA---RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
T +ARV +R +A + H+++ER RR++I ERMK LQEL+P NK+DKASMLDE I+Y
Sbjct: 270 TKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEY 329
Query: 340 VKFLQLQVKVLSM 352
+K LQLQ++++SM
Sbjct: 330 MKSLQLQIQMMSM 342
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Query: 284 GKARVR----ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
K +VR A+R +A + H+++ER RR++I E+MK LQEL+P NK+DKASMLDE I+Y
Sbjct: 294 AKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEY 353
Query: 340 VKFLQLQVKVLSM 352
+K LQLQV+++SM
Sbjct: 354 LKSLQLQVQMMSM 366
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM-LDEIIDYVKFLQL 345
VR RRGQATD HS+AER RREKI RMK LQELVP +K +M LDEII++V+ LQ
Sbjct: 199 HVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQR 258
Query: 346 QVKVLSM 352
QV++LSM
Sbjct: 259 QVEILSM 265
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 53/63 (84%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQ+QV++
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQM 370
Query: 350 LSM 352
+ M
Sbjct: 371 MWM 373
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
+R+RRGQAT+ HS+AER+RREKI+ERMK LQ+LVP NK T KA +L+ II+YV+ LQ Q
Sbjct: 112 LRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQ 171
Query: 347 VKVLSM 352
V++LS+
Sbjct: 172 VEILSV 177
>gi|356502821|ref|XP_003520214.1| PREDICTED: uncharacterized protein LOC100788949 [Glycine max]
Length = 320
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 39/175 (22%)
Query: 263 VGLPSLQQTASANPTGGCNGTG-KARVRARRGQATDPHSIAERLRREKIAERMKNLQELV 321
VG P+L P GC+ + KARV ER RR++IA+ +K L EL+
Sbjct: 169 VGAPTLL------PKPGCSSSKQKARV-------------TERQRRQRIADNLKALHELL 209
Query: 322 PNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR-LGAAGAVLPLITDGQAEASKGLSLSP 380
PN + +A +LD+IIDYVK+LQLQ+K S SR L A +PL+
Sbjct: 210 PNPAEGSQAYVLDDIIDYVKYLQLQIKEQSGSRLLQADSTAIPLVF-------------- 255
Query: 381 QADQGVDISLNSDQI--AFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAIS 433
+G +N + EE + KL+E + A+Q L++KGL L+P+AL +S
Sbjct: 256 --HEGYGHYINQKMLNEPLEEIMGKLVEDDSAAAVQLLESKGLFLLPMALVDELS 308
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GK+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNS+K+DKASMLDE+I+Y+K L
Sbjct: 260 GKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQL 319
Query: 344 QLQVKVLSMSRLGAAGAVLPL 364
Q Q++++ +R+ + +LPL
Sbjct: 320 QAQLQMI--NRINMSSMMLPL 338
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 23/160 (14%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
L A NPT T RR +A + H+++ER RR++I E+M+ LQEL+P+ KT
Sbjct: 167 LDSMAGNNPTKRSGST-------RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYKT 219
Query: 328 DKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVD 387
DKASMLDE I+Y+K LQLQ++V+ M G + P++ G + + P
Sbjct: 220 DKASMLDEAIEYLKSLQLQLQVMWM-----GGGMAPMLFPGVQHFMSRMGMGP------- 267
Query: 388 ISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKG-LCLMPI 426
L S Q V+L++ +++ M QN G +C P+
Sbjct: 268 -PLPSMQNPMHLPRVQLIDQSIS--MAPTQNSGVMCQAPV 304
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Query: 284 GKARVR----ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
K +VR A+R +A + H+++ER RR++I E+MK LQEL+P NK+DKASMLDE I+Y
Sbjct: 256 AKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEY 315
Query: 340 VKFLQLQVKVLSM 352
+K LQLQV+++SM
Sbjct: 316 LKSLQLQVQMMSM 328
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI ER++ LQ++VP K+ A+MLDEII+YV+ LQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 345 LQVKVLSMSRLGAAGAV 361
QV++LSM +L AA +
Sbjct: 206 NQVELLSM-KLTAASSF 221
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM-LDEIIDYVKFLQL 345
VR RRGQATD HS+AER RREKI RMK LQELVP +K +M LDEII++V+ LQ
Sbjct: 205 HVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQR 264
Query: 346 QVKVLSM 352
QV++LSM
Sbjct: 265 QVEILSM 271
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN K T+ + MLD +DY+K LQ+
Sbjct: 326 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQM 385
Query: 346 QVKVLSMSR 354
QVKV++ R
Sbjct: 386 QVKVMNDGR 394
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VRARRG+ATD HS+AER+RRE+I+ERMK L+ LVP NK T KA MLDEII+YV+ LQ
Sbjct: 150 VRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T R ++R ++ + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K
Sbjct: 185 TNLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 244
Query: 343 LQLQVKVLSM 352
LQLQV++LSM
Sbjct: 245 LQLQVQMLSM 254
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R ++R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQ
Sbjct: 154 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 213
Query: 347 VKVLSMSR-LGAAGAVLP 363
V++LS+ +G LP
Sbjct: 214 VQMLSLRNGIGLHPMCLP 231
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
V+ARRG+A + HS+AER+RREKI+ERMK LQ+LVP ++ T K +LDEII+YV+ LQ
Sbjct: 204 HVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQ 263
Query: 346 QVKVLSMSRLGAAG 359
QV++LSM +L + G
Sbjct: 264 QVELLSM-KLASVG 276
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
+R +A + H+++ER RR++I ERMK LQEL+P NK+DKASMLDE I+Y+K LQLQ++V
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQV 348
Query: 350 LSM 352
+SM
Sbjct: 349 MSM 351
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR ++ D H+ +ER RR++I E+++ LQEL+PN KTDK SMLDE IDY+K LQLQ+++L
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
Query: 351 SMSRLGAAGAVLP 363
M + G V+P
Sbjct: 77 VMGKGGGMAPVVP 89
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 284 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQK 343
Query: 346 QVKVL 350
QVKVL
Sbjct: 344 QVKVL 348
>gi|357440797|ref|XP_003590676.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355479724|gb|AES60927.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 325
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 275 NPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
NP G + T + + R ++R RR++IA+ +K L EL+P + +A +LD
Sbjct: 180 NPKSGGSSTKQKSEKTR---------YSDRQRRQRIADNLKALHELLPTPHVGSQAYILD 230
Query: 335 EIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQ 394
+IIDYVK+LQ+QVK LS S+L A +PL+ G + Q LN
Sbjct: 231 DIIDYVKYLQIQVKELSGSKLQADSNSIPLVF----HEGYGHYIKEQV-------LNE-- 277
Query: 395 IAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
EE + L+E N Q L+NKGL L+PIAL +
Sbjct: 278 -PLEEIMGNLLEVNSAATCQLLENKGLVLLPIALVDEL 314
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 5/71 (7%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
G+G R RA + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K
Sbjct: 99 GSGSKRTRA-----AEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLK 153
Query: 342 FLQLQVKVLSM 352
LQLQV++LSM
Sbjct: 154 QLQLQVQMLSM 164
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 291 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 350
Query: 346 QVKVLSMSR 354
QVKVL S+
Sbjct: 351 QVKVLKESQ 359
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR ++ + H+ +ER RR+KI E++K LQEL+PN NKTDK SMLDE IDY+K LQLQ+++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQM 73
Query: 350 LSMSRLGAAGAVLPL 364
L M + V+PL
Sbjct: 74 LVMGK--GMSPVVPL 86
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 9/96 (9%)
Query: 273 SANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM 332
SA+P G+ +R +A + H+++ER RR++I E+MK LQEL+P NKTDKASM
Sbjct: 299 SADPKKQLRGS----TSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASM 354
Query: 333 LDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDG 368
LDE I+Y+K LQLQV+++SM ++P++ G
Sbjct: 355 LDEAIEYLKTLQLQVQMMSM-----GCGMMPMMFPG 385
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 280 CNGTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEII 337
C T + R +R +A + H+++ER RR++I E+MK LQEL+P NK DKASMLDE I
Sbjct: 285 CYSTKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAI 344
Query: 338 DYVKFLQLQVKVLSM 352
+Y+K LQLQV+++SM
Sbjct: 345 EYLKTLQLQVQMMSM 359
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 83.6 bits (205), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/70 (65%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPN-SNKTDKASMLDEIIDYVKF 342
G VRARRGQAT+ HS+AER RREKI+ RMK LQ LVP S T KA ML+EII+YVK
Sbjct: 15 GFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKS 74
Query: 343 LQLQVKVLSM 352
LQ Q++ LSM
Sbjct: 75 LQRQIEFLSM 84
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT A MLDEII+YV+ LQ Q
Sbjct: 156 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 215
Query: 347 VKVLSMSRLGAA 358
V+ LSM +L AA
Sbjct: 216 VEFLSM-KLTAA 226
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 273 SANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM 332
S+ T N +GK RA +G ATDP S+ R RRE+I ER++ LQ LVPN K D ++M
Sbjct: 211 SSKGTTTLNSSGK--TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTM 268
Query: 333 LDEIIDYVKFLQLQVKVLS 351
L+E + YVKFLQLQ+K+LS
Sbjct: 269 LEEAVQYVKFLQLQIKLLS 287
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+ +ER RR++I E+M+ LQEL+PNSNKTDKASMLDE I+Y+K LQLQ++++
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMM 651
Query: 351 SMSRLGAAGAVLP 363
S+ G LP
Sbjct: 652 SIR----TGMTLP 660
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Query: 284 GKARVR----ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
K R+R ++R +A + H+++ER RR++I E+M+ LQEL+P NK+DKASMLDE I+Y
Sbjct: 353 AKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 412
Query: 340 VKFLQLQVKVLSM 352
+K LQLQV+++SM
Sbjct: 413 LKSLQLQVQMMSM 425
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A MLDE + YVKFLQ
Sbjct: 79 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQ 138
Query: 345 LQVKVLS 351
Q++ LS
Sbjct: 139 KQIEELS 145
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Query: 247 HPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLR 306
H LS S P +V V + + P ++RA+RG AT P SIAER+R
Sbjct: 239 HLLSHHLSLPKASVDMVAMEKFLHFQDSVP---------CKIRAKRGCATHPRSIAERVR 289
Query: 307 REKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLSMSR 354
R +I+ERM+ LQELVPN +K T+ A MLD +DY+K LQ Q K LS +R
Sbjct: 290 RTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSDNR 338
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVK 341
T VRARRGQATD HS+AER+RR KI E++K LQ +VP KT A MLDEII+YV+
Sbjct: 147 TQVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQ 206
Query: 342 FLQLQVKVLSMSRLGAA 358
LQ QV+ LSM +L AA
Sbjct: 207 SLQHQVEFLSM-KLTAA 222
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
V+ARRG+A + HS+AER+RREKI+ERMK LQ+LVP ++ T K +LDEII+YV+ LQ
Sbjct: 204 HVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQ 263
Query: 346 QVKVLSMSRLGAAG 359
QV+ LSM +L + G
Sbjct: 264 QVEFLSM-KLASVG 276
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 316 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 375
Query: 346 QVKVLSMSR 354
QVK L+ SR
Sbjct: 376 QVKALNESR 384
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E +DYVKFLQ
Sbjct: 187 KIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQR 246
Query: 346 QVKVLS 351
Q++ L+
Sbjct: 247 QIQELT 252
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A MLDE + YVKFLQ
Sbjct: 168 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQ 227
Query: 345 LQVKVLS 351
Q++ L+
Sbjct: 228 RQIQELT 234
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ R+ RG ATDP S+ R RRE+I ER+K LQ LVPN K D ++ML+E + YVKFLQL
Sbjct: 222 GKSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQL 281
Query: 346 QVKVLS 351
Q+K+LS
Sbjct: 282 QIKLLS 287
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQM 439
Query: 350 LSM 352
+SM
Sbjct: 440 MSM 442
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 53/63 (84%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQ+QV++
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQM 91
Query: 350 LSM 352
+ M
Sbjct: 92 MWM 94
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV++
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQM 236
Query: 350 LSMSRLGAAGAVLPLI 365
+SM G+ + P++
Sbjct: 237 MSM---GSGLCIPPML 249
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 346 QVKVLS 351
Q++ L+
Sbjct: 242 QIQELT 247
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQLQ+++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 373
Query: 350 LSMSRLGAAGAVLPLI 365
+ M A + P +
Sbjct: 374 MWMGSGMAPPVMFPGV 389
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQLQ+++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 373
Query: 350 LSMSRLGAAGAVLPLITDG 368
+ M +G P++ G
Sbjct: 374 MWM----GSGMAPPVMFPG 388
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN +K T+ A MLD +DY+K LQ
Sbjct: 332 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQK 391
Query: 346 QVKVLS 351
QV+ LS
Sbjct: 392 QVQTLS 397
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++L
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 218
Query: 351 SM 352
SM
Sbjct: 219 SM 220
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 231 YLSASIVAKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRA 290
Y ++IVA Q+ S F RP ++ ++ A N T K + ++
Sbjct: 184 YAESTIVADSIQDSATPDASSFHKRP----------NMGESMQALKKQCNNATKKPKPKS 233
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
G A D SIA + RRE+I+ER+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL
Sbjct: 234 AAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 293
Query: 351 SMSRL 355
+ L
Sbjct: 294 ATDEL 298
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
RVRARRGQATD S+AE +R EKI +RMK LQ+LVP K T K MLDEII+YV+ LQ
Sbjct: 10 RVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQSLQC 69
Query: 346 QVKVLSMSRLGAA 358
Q + LSM +LGA
Sbjct: 70 QAESLSM-KLGAV 81
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+VRA+RG AT P SIAER+RR KI+ER++ LQELVP+ +K T+ + MLD +DY+K LQ
Sbjct: 296 KVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQK 355
Query: 346 QVKVLSMSR 354
QVK L+ SR
Sbjct: 356 QVKALNESR 364
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+VRA+RG AT P SIAER+RR KI+ER++ LQELVP+ +K T+ + MLD +DY+K LQ
Sbjct: 296 KVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQK 355
Query: 346 QVKVLSMSR 354
QVK L+ SR
Sbjct: 356 QVKALNESR 364
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 5/86 (5%)
Query: 284 GKARVR----ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
K +VR +R A + H+++ER RR++I E+MK LQEL+P NK+DKASMLDE I+Y
Sbjct: 262 AKKQVRGSTSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEY 321
Query: 340 VKFLQLQVKVLSMSRLGAAGAVLPLI 365
+K LQLQV+++SM G + P I
Sbjct: 322 LKSLQLQVQMMSMG-CGMVPMIFPGI 346
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VR RRGQATD HS+AER RREKI RMK LQELVP NK + A +LD+II++V+ LQ
Sbjct: 187 HVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQN 246
Query: 346 QVKVLSMSRLGAAGAVL 362
+V++LSM +L A V+
Sbjct: 247 EVEILSM-KLAAVNPVI 262
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+ RARRG AT P SIAER RR +I+ERMK LQ+LVPN +K T+ A MLDE ++YVK LQ
Sbjct: 14 KTRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQT 73
Query: 346 QVKVLS 351
QVK LS
Sbjct: 74 QVKDLS 79
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 263 VGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVP 322
+ LP AS + + +VRA+RG AT P SIAER+RR +I+ERM+ LQELVP
Sbjct: 260 LSLPKSSDMASVDKFMQLQDSVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 319
Query: 323 NSNK-TDKASMLDEIIDYVKFLQLQVKVLSMSR 354
N +K T+ + MLD +DY+K LQ Q K+L+ +R
Sbjct: 320 NMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNR 352
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 41/214 (19%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 276
Query: 351 SMSR------LGAAGAVLPLITDGQ----AEASKGLSLS---PQADQGV--DISLNSD-- 393
M+ A +P + G A++GLS P + + I LNS
Sbjct: 277 WMTTGMAPMMFPGAHQFMPPMAVGMNSACMPAAQGLSHMSRLPYMNHSMPNHIPLNSSPA 336
Query: 394 ----QIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEENKF 449
+A + + ++L E++ +L G +P + SG +S ++++N+
Sbjct: 337 MNPMNVANQMQNIQLREASNP----FLHPDGWQTVPPQV-----SGPYASGPQVAQQNQI 387
Query: 450 CFSNGLVQSNSSSASSNSSLPNNGINQMPLNTNI 483
AS+++ LPN+G Q P + I
Sbjct: 388 -----------PKASASTVLPNSGAEQPPTSDGI 410
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 280 CNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
N K RR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y
Sbjct: 20 ANKPAKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 79
Query: 340 VKFLQLQVKVLSMSRLGAAGAVLPLITDG 368
+K LQLQ++V+ M ++P++ G
Sbjct: 80 LKSLQLQLQVMWM-----GSGIVPVMFPG 103
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKASMLDE I+Y+K LQLQ+++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 354
Query: 350 LSMSRLGAAGAVLPLI 365
+ M A + P +
Sbjct: 355 MWMGSGMAPPVMFPGV 370
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
+VRA+RG AT P SIAER+RR KI+ER++ LQELVP+ +K T+ + MLD +DY+K LQ
Sbjct: 192 CKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQ 251
Query: 345 LQVKVLSMSR 354
QVK L+ SR
Sbjct: 252 KQVKALNESR 261
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +AT+ H+++ER RR++I ++M+ LQ+L+PNSNK DKASML E IDY+K LQLQV++
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQM 430
Query: 350 LSM-SRLGAAGAVLP 363
+SM +RL +LP
Sbjct: 431 MSMGTRLCMPLMMLP 445
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
+ RA RG ATDP S+ R RRE+I ER+K LQ +VPN K D ++ML+E + YVKFLQLQ
Sbjct: 269 KTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQ 328
Query: 347 VKVLSM 352
+KV ++
Sbjct: 329 IKVKAL 334
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +AT+ H+++ER RR++I ++M+ LQ+L+PNSNK DKASML E IDY+K LQLQV++
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQM 436
Query: 350 LSM-SRLGAAGAVLP 363
+SM +RL +LP
Sbjct: 437 MSMGTRLCMPLMMLP 451
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 287 RVRA-RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
R R+ RR +A + H+ +ER RR++I E+M+ LQ+L+PNSNKTDKASML+E I+Y+K LQ
Sbjct: 352 RTRSSRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQF 411
Query: 346 QVKVLSMSRLGAAGAVLPLITDG 368
Q++V+ M G + P++ G
Sbjct: 412 QLQVMWM-----GGGMTPVMFPG 429
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 41/214 (19%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 287
Query: 351 SMSR------LGAAGAVLPLITDGQ----AEASKGLSLS---PQADQGV--DISLNSD-- 393
M+ A +P + G A++GLS P + + I LNS
Sbjct: 288 WMTTGMAPMMFPGAHQFMPPMAVGMNSACMPAAQGLSHMSRLPYMNHSMPNHIPLNSSPA 347
Query: 394 ----QIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALATAISSGKASSSDTISEENKF 449
+A + + ++L E++ +L G +P + SG +S ++++N+
Sbjct: 348 MNPMNVANQMQNIQLREASNP----FLHPDGWQTVPPQV-----SGPYASGPQVAQQNQI 398
Query: 450 CFSNGLVQSNSSSASSNSSLPNNGINQMPLNTNI 483
AS+++ LPN+G Q P + I
Sbjct: 399 -----------PKASASTVLPNSGAEQPPTSDGI 421
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER RREKI RMK LQELVP +K + A +LDEII++V+ LQ
Sbjct: 5 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQ 64
Query: 345 LQVKVLSMSRLGAA 358
+V+ LSM RL A
Sbjct: 65 REVEFLSM-RLAAV 77
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GK+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+K L
Sbjct: 205 GKSSVSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQL 264
Query: 344 QLQVKVLS 351
Q QV ++S
Sbjct: 265 QAQVSMMS 272
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 7/78 (8%)
Query: 280 CNGTGKARVRARRGQ------ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASML 333
C G G AR+++++ + DP S+A ++RREKIAE++K LQ+LVPN K D +ML
Sbjct: 215 CGGVG-ARMKSKQAKLAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTML 273
Query: 334 DEIIDYVKFLQLQVKVLS 351
++ I YVKFLQLQVKVL+
Sbjct: 274 EKAITYVKFLQLQVKVLA 291
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER+RR KI ER++ LQ++VP KT A MLDEII+YV+ LQ Q
Sbjct: 73 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 132
Query: 347 VKVLSMSRLGAA 358
V+ LSM +L AA
Sbjct: 133 VEFLSM-KLTAA 143
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VR RRGQATD HS+AER RREKI RMK LQELVP NK + A +LD+II++V+ LQ
Sbjct: 191 HVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQN 250
Query: 346 QVKVLSMSRLGAAGAVL 362
+V++LSM +L A V+
Sbjct: 251 EVEILSM-KLAAVNPVI 266
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD ++Y+K LQ
Sbjct: 298 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQ 357
Query: 345 LQVKVLSMSR 354
Q K LS R
Sbjct: 358 KQFKTLSEKR 367
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRA+RGQATD HSIAER+RREKI +++ LQ+LVP +K+ A ML+EII+YV LQ
Sbjct: 148 HVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQN 207
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQA 382
QV+ LSM L AA L + + E+SK ++ A
Sbjct: 208 QVEFLSM-ELAAASCSYDL--NLETESSKKAQVTSSA 241
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN +K T+ A MLD +DY+K LQ
Sbjct: 329 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQK 388
Query: 346 QVKVLS 351
QV+ LS
Sbjct: 389 QVQTLS 394
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 53/63 (84%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R +A + H+ +ER RR++I E+M+ LQEL+PNSNKTDKASMLDE I+Y+K LQLQ++V
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 78
Query: 350 LSM 352
++
Sbjct: 79 CAV 81
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+M+ LQELVP+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 304
Query: 351 SMSRLGAAGAVLP 363
MS G A ++P
Sbjct: 305 WMS-TGMAPMMIP 316
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R ++R +A + H+++E+ RR KI E++K LQ L+PNSNKTDKASMLDE I+Y+K LQLQ
Sbjct: 84 RSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 143
Query: 347 VKVLSMSRLG 356
V++L M R G
Sbjct: 144 VQML-MVRNG 152
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 19/159 (11%)
Query: 212 DVDTTGNRYVGMDKILQFDYLSA--------SIVAKGEQEL--PNHPLSCFSSRPLPTVP 261
DV ++ + + KILQ +Y + ++ QEL P S L T P
Sbjct: 38 DVVSSSDDFFPFSKILQGNYAAVLDGSNHQTNLYDDSRQELVKPRKKQKISSESNLVTEP 97
Query: 262 TVGLPSLQQTASANPTGGCNGTG---------KARVRARRGQATDPHSIAERLRREKIAE 312
Q ++ N + N G K + ++ +G A+DP S+ R RRE+I +
Sbjct: 98 KTAWRDGQSLSNYNSSDDENALGLVSNTSKSLKRKAKSNKGIASDPQSLYARKRRERIND 157
Query: 313 RMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
R+K LQ LVPN K D ++ML++ + YVKFLQLQ+K+LS
Sbjct: 158 RLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLS 196
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRA+RGQATD HS+AER+RREKI E+++ LQ+LVP KT A MLD II+YV+ LQ
Sbjct: 139 HVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQN 198
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEA 372
Q++ LSM +L AA +AEA
Sbjct: 199 QIEFLSM-KLSAASTFYDF-NSSEAEA 223
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Query: 284 GKARVRA----RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
G +VR +R +A + H+++ER RR++I E+MK LQEL+P NK DKASMLDE I+Y
Sbjct: 291 GSKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEY 350
Query: 340 VKFLQLQVKVLSM 352
+K LQLQV+++SM
Sbjct: 351 LKTLQLQVQMMSM 363
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 103 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 162
Query: 345 LQVKVLS 351
+++ LS
Sbjct: 163 QKIQELS 169
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 7/76 (9%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-------TDKASMLDEIID 338
R+RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ + MLDE ++
Sbjct: 414 CRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVE 473
Query: 339 YVKFLQLQVKVLSMSR 354
Y+KFLQ QV L R
Sbjct: 474 YMKFLQKQVDDLQECR 489
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 16/107 (14%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ RA RG ATDP S+ R RRE+I ER++ LQ LVPN K ++ML+E + YVKFLQL
Sbjct: 235 GKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQL 294
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNS 392
Q+K+LS L P+ +G D G+D+ LN+
Sbjct: 295 QIKLLSSDDL---WMYAPIAYNGM-------------DIGLDLKLNA 325
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
VR RRGQATD HS+AER RREKI RMK LQELVP K + A +LDEII++V+ LQ
Sbjct: 171 VHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQ 230
Query: 345 LQVKVLSM 352
QV++LSM
Sbjct: 231 RQVEILSM 238
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 52/61 (85%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+++ER RR++I ERMK LQEL+PNSNKTDKASMLDE I+Y+K LQ Q++V
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 350 L 350
+
Sbjct: 64 V 64
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 173 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 232
Query: 345 LQVKVLS 351
+++ LS
Sbjct: 233 QKIQELS 239
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASMLDEIIDYVKFLQL 345
VRARRGQATD HSIAER+RREKI R++ LQ+LVP K A MLDEII+YV LQ
Sbjct: 201 HVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYVHSLQN 260
Query: 346 QVKVLSMSRLGAAGAV 361
QV+ LS L AA ++
Sbjct: 261 QVEFLS-RELAAASSL 275
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 376
Query: 351 SMSRLGAAGAVLP 363
M+ G A + P
Sbjct: 377 WMT-TGMAPMMFP 388
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 392
Query: 351 SMSRLGAAGAVLP 363
M+ G A + P
Sbjct: 393 WMT-TGMAPMMFP 404
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRA+RGQATD HS+AER+RREKI E+++ LQ+LVP KT A MLD II+YV+ LQ
Sbjct: 122 HVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQN 181
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEA 372
Q++ LSM +L AA +AEA
Sbjct: 182 QIEFLSM-KLSAASTFYDF-NSSEAEA 206
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 48/67 (71%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E YVKFLQ
Sbjct: 193 KTCTRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQ 252
Query: 345 LQVKVLS 351
LQ+K+LS
Sbjct: 253 LQIKLLS 259
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 55/82 (67%), Gaps = 17/82 (20%)
Query: 288 VRARRGQATDPHSIAERL----------------RREKIAERMKNLQELVPNSNK-TDKA 330
VRARRGQATD HSIAER+ RREKI+ERMK LQ+LVP NK KA
Sbjct: 124 VRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVPGCNKMIGKA 183
Query: 331 SMLDEIIDYVKFLQLQVKVLSM 352
+LDEII+Y++ LQ QV+ LSM
Sbjct: 184 LVLDEIINYIQSLQHQVEFLSM 205
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
K+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNSNKTDKASMLDE+I+Y+K L
Sbjct: 283 AKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQL 342
Query: 344 QLQVK 348
Q QV+
Sbjct: 343 QAQVQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
K+ V +R +A H+ +ER RR+KI +RMK LQ+LVPNSNKTDKASMLDE+I+Y+K L
Sbjct: 283 AKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQL 342
Query: 344 QLQVK 348
Q QV+
Sbjct: 343 QAQVQ 347
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R +A + H+++ER RR++I E+MK LQEL+P+ NKTDKASMLDE I+Y+K LQLQ+++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 324
Query: 350 LSMSRLGAAGAVL 362
+ M A AV+
Sbjct: 325 MWMGGGMAPPAVM 337
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 277 TGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEI 336
GG + +RG+ + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E
Sbjct: 252 AGGLRRSAAGARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEA 311
Query: 337 IDYVKFLQLQVKVLSMSRLGAAGAV 361
I+Y+K LQLQV++ MS +G A A
Sbjct: 312 IEYLKTLQLQVQM--MSSMGPAAAA 334
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 52/61 (85%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+++ER RR++I ERMK LQEL+PNSNKTDKASMLDE I+Y+K LQ Q++V
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 350 L 350
+
Sbjct: 64 V 64
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R +A + H+++ER RR++I E+MK LQEL+P+ NKTDKASMLDE I+Y+K LQLQ+++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 324
Query: 350 LSMSRLGAAGAVL 362
+ M A AV+
Sbjct: 325 MWMGGGMAPPAVM 337
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+++ER RR++I E+MK LQEL+P NK+DKASMLDE I+Y+K LQLQV+++
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 319
Query: 351 SMSRLGAAGAVLPLI 365
SM G + P I
Sbjct: 320 SMG-YGMVPMMFPGI 333
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R +A + H+++ER RR++I E+MK LQEL+P+ NKTDKASMLDE I+Y+K LQLQ+++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 333
Query: 350 LSMSRLGAAGAVL 362
+ M A AV+
Sbjct: 334 MWMGGGMAPRAVM 346
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQM 211
Query: 350 LS 351
LS
Sbjct: 212 LS 213
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T R ++R ++ + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K
Sbjct: 185 TNLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 244
Query: 343 LQLQVKVLSM 352
LQLQV++LSM
Sbjct: 245 LQLQVQMLSM 254
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 27/175 (15%)
Query: 197 PRTRGFYLQGATMNHDVDTTGNRYVGMDKILQ-------FDYLSASI-VAKGEQELPNHP 248
P +G Y QG + T + G D +Q +DYLS +I V+ G + +
Sbjct: 81 PVEQGLYQQGGFHRQN-STPADFLSGSDGFIQSFGIQANYDYLSGNIDVSPGSKR--SRE 137
Query: 249 LSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTG-----------KARVRARRGQATD 297
+ S P T G +Q++ PTG + + RVRA+RG AT
Sbjct: 138 MEALFSSPEFTSQMKG----EQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATH 193
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 351
P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YVK LQ Q++ L+
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 248
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRA+RGQATD HS+AER+RREKI E+++ LQ+LVP KT A MLD II+YV+ LQ
Sbjct: 118 HVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQN 177
Query: 346 QVKVLSMSRLGAAGAVLPLITDGQAEA 372
Q++ LSM +L AA +AEA
Sbjct: 178 QIEFLSM-KLSAASTFYDF-NSSEAEA 202
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 320 CKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 379
Query: 345 LQVKVLSMSR 354
QVK L+ SR
Sbjct: 380 KQVKGLNDSR 389
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 368
Query: 351 SM 352
SM
Sbjct: 369 SM 370
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 298 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 357
Query: 345 LQVKVLSMSR 354
Q K+L+ +R
Sbjct: 358 RQYKILNDNR 367
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN +K T+ A MLD ++Y+K LQ
Sbjct: 339 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQN 398
Query: 346 QVKVLSMSR 354
QV+ LS +R
Sbjct: 399 QVQTLSDNR 407
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 277 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 336
Query: 345 LQVKVLSMSR 354
Q K+L+ +R
Sbjct: 337 RQYKILNDNR 346
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 277 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 336
Query: 345 LQVKVLSMSR 354
Q K+L+ +R
Sbjct: 337 RQYKILNDNR 346
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T R ++R ++ + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K
Sbjct: 185 TDLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 244
Query: 343 LQLQVKVLSM 352
LQLQV++LSM
Sbjct: 245 LQLQVQMLSM 254
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
RR ++ + H+ +ER RR+KI E++K LQEL+PN NKTDK SMLDE IDY+K LQLQ+++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQM 73
Query: 350 LSMSRLGAAGAVLPL 364
L M + V+PL
Sbjct: 74 LVMGK--GMSPVVPL 86
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ERM+ LQ+LVPN +K T+ + MLD +DY+K LQ
Sbjct: 338 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQR 397
Query: 346 QVKVLSMSR 354
QV+ LS +R
Sbjct: 398 QVETLSENR 406
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 316 CKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 375
Query: 345 LQVKVLSMSR 354
QVK L+ SR
Sbjct: 376 KQVKGLNDSR 385
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQ+LVPN +K T+ + MLD +DY+K LQ
Sbjct: 342 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQ 401
Query: 345 LQVKVLSMSR 354
Q K LS +R
Sbjct: 402 RQFKALSENR 411
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 440
Query: 351 SM 352
SM
Sbjct: 441 SM 442
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
R+RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ + MLDE ++Y+KFLQ
Sbjct: 23 CRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQ 82
Query: 345 LQV 347
QV
Sbjct: 83 KQV 85
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 259 TVPTVGLPSLQQ--TASANPTGGCNGTGKAR---VRAR-RGQATDPHSIAERLRREKIAE 312
T+P + P N T N G R VR R R H+++E+ RR KI E
Sbjct: 63 TLPAISTPGSSNFFAGEENKTNNENALGNQRNKAVRTRQRSIDAKFHNLSEKRRRSKINE 122
Query: 313 RMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS-MSRLGAAGAVLP 363
+MK LQ+L+PNSNKTDKASMLDE I+Y+K LQLQV+ L+ M+ LG LP
Sbjct: 123 KMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQALAVMNGLGLNPMRLP 174
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 81.6 bits (200), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/39 (94%), Positives = 38/39 (97%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK 326
VRARRGQATDPHSIAERLRREKIAERMK LQELVPN+NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
+ RA G ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQLQ
Sbjct: 263 KSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 322
Query: 347 VKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDI 388
+K+LS L P+ +G + GL LS +G+ +
Sbjct: 323 IKLLSSDDLWMYA---PIAYNG---INIGLDLSISPTKGISM 358
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 496
Query: 351 SM 352
SM
Sbjct: 497 SM 498
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER+RR +I++R++ LQE+VPN +K T+ A ML+E ++YVKFLQ
Sbjct: 166 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 225
Query: 345 LQVKVLS 351
Q++ L+
Sbjct: 226 KQIQELT 232
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+++ER RR++I E+MK LQEL+P NK+DKASMLDE I Y+K LQLQV+++
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMM 364
Query: 351 SMSRLGAAGAVLPLI 365
SM G + P I
Sbjct: 365 SMG-CGMVPVMFPGI 378
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVP+ +K T+ A MLD ++Y+K LQ
Sbjct: 292 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQ 351
Query: 345 LQVKVLSMSRLGAAGAVLP 363
Q K LS R +P
Sbjct: 352 KQFKTLSEKRANCKCISMP 370
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQL 345
VRA+RGQATD HSIAER+RREKI +++ LQ++VP +K+ A ML+EII+YV LQ
Sbjct: 157 HVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQN 216
Query: 346 QVKVLSMSRLGAAGA 360
QV+ LSM L AA
Sbjct: 217 QVEFLSM-ELAAASC 230
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 461
Query: 351 SM 352
SM
Sbjct: 462 SM 463
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI RMK L+ELVP +K A +LDEII++V+ LQ Q
Sbjct: 33 VRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQ 92
Query: 347 VKVLSMSRLGAA 358
V++LSM RL A
Sbjct: 93 VEMLSM-RLAAV 103
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A MLDE + YVKFLQ
Sbjct: 116 CKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQ 175
Query: 345 LQVKVLS 351
Q++ LS
Sbjct: 176 NQIEELS 182
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 27/175 (15%)
Query: 197 PRTRGFYLQGATMNHDVDTTGNRYVGMDKILQ-------FDYLSASI-VAKGEQELPNHP 248
P +G Y QG + T + G D +Q +DYLS +I V+ G + +
Sbjct: 83 PVEQGLYQQGGFHRQN-STPADFLSGSDGFIQSFGIPANYDYLSGNIDVSPGSKR--SRE 139
Query: 249 LSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTG-----------KARVRARRGQATD 297
+ S P T G +Q++ P G T RVRA+RG AT
Sbjct: 140 MEALFSSPEFTSQMKG----EQSSGQVPAGVSGMTDMNMENLMEDSVAFRVRAKRGCATH 195
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 351
P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YVK LQ Q++ L+
Sbjct: 196 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 250
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK---TDKASMLDEIIDYVKF 342
VRARRGQATD HS+AER RREKI RMK LQELVP +K + A +LD+II++V+
Sbjct: 30 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQS 89
Query: 343 LQLQVKVLSMSRLGAA 358
LQ QV+ LSM RL A
Sbjct: 90 LQRQVEFLSM-RLAAV 104
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 321 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIM 380
Query: 351 SMSRLGAAGAVLP 363
M+ G A + P
Sbjct: 381 WMTS-GMAPMMFP 392
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+M+ LQEL+P+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 227 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIM 286
Query: 351 SMSRLGAAGAVLP 363
M+ G A + P
Sbjct: 287 WMTS-GMAPMMFP 298
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 508
Query: 351 SM 352
SM
Sbjct: 509 SM 510
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R RA+RG ATDP S+ R RREKI ER+K LQ LVPN + D +ML+E I +VKFL+ Q
Sbjct: 469 RPRAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQ 528
Query: 347 VKVL 350
+++L
Sbjct: 529 LELL 532
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 270 QTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-D 328
+ A +N T VRARRGQATD HS+AER+RR KI E+++ LQ +VP KT
Sbjct: 139 KRAKSNVTEEEKEKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMG 198
Query: 329 KASMLDEIIDYVKFLQLQVKVLSMSRLGAA 358
A MLDEII+YV+ LQ QV+ LS+ +L AA
Sbjct: 199 MAVMLDEIINYVQSLQHQVEFLSL-KLTAA 227
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 273 SANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM 332
S P+ G NG K + DP S+A + RRE+I+ER+K LQELVPN K D +M
Sbjct: 189 SKKPSSGTNGEAKPKATT---SPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTM 245
Query: 333 LDEIIDYVKFLQLQVKVLSMSRLG-AAGAVLPLIT 366
L++ I YVKFLQ+QVKVL+ A G P I+
Sbjct: 246 LEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDIS 280
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ER++ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 67 CKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQ 126
Query: 345 LQVKVLSMSR 354
QVK L+ SR
Sbjct: 127 KQVKGLNDSR 136
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 49/58 (84%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
A + H+++E+ RR KI E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++LSM
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 141
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 30/105 (28%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK--------------------- 326
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNF 337
Query: 327 ---------TDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVL 362
T KA MLDEII+YV+ LQ QV+V + A A+L
Sbjct: 338 QRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDLHSALSALL 382
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRA+RGQATD HS+AER+RR KI E+++ LQ +VP KT A MLDEII+YV+ LQ
Sbjct: 131 VHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 190
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQA 370
QV+ LSM +L AA L ++ A
Sbjct: 191 HQVEFLSM-KLTAASTYYDLNSESDA 215
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN +K T+ A MLD ++Y+K LQ
Sbjct: 336 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQN 395
Query: 346 QVKVLSMSR 354
QV+ LS +R
Sbjct: 396 QVEALSDNR 404
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
R RA+RG AT P SIAER+RR KI+ERMK LQ+LVPN +K T+ + MLDE ++YVK LQ
Sbjct: 31 RTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQR 90
Query: 346 QVKVLS--MSRLGA 357
+V+ LS ++RL A
Sbjct: 91 KVQELSDTVARLKA 104
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T + A+R +A H+++ER RR++I E+M+ LQELVP+ NKTDKASMLDE I+Y+K
Sbjct: 226 TAQKPATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKS 285
Query: 343 LQLQVKVLSM--SRLGAAGAVLP 363
LQLQ++V+ R+ A + P
Sbjct: 286 LQLQLQVMWAMGGRMAPAPVMFP 308
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
+ RAR+G A DP SIA R+RRE+I+ER+K LQ L+PN +K D +ML++ I YV+ L+LQ
Sbjct: 753 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQ 812
Query: 347 VKVL 350
+K+L
Sbjct: 813 IKML 816
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ER++ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 287 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQK 346
Query: 346 QVKVLSMSRLG 356
QVK S LG
Sbjct: 347 QVKNSKASSLG 357
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 251 CFSSRPLP--TVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRRE 308
C SR L T +V L + +++++ G + RA+RG ATDP SI R RRE
Sbjct: 198 CLESRGLESRTKSSVTLSAPEESSTVTSALGPALNTDGKPRAKRGSATDPQSIYARQRRE 257
Query: 309 KIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQV 347
+I ER++ LQ LVPN K D +ML+E I+YVKFLQLQ+
Sbjct: 258 RINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQLQL 296
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+ +ER RR++I E+MK LQELVP+ NK+DKAS+LDE I+Y+K LQLQV+++
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIM 199
Query: 351 SMSRLGAAGAVLP 363
M+ G A + P
Sbjct: 200 WMT-TGMAPMMFP 211
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
G+ R +R H+++E+ RR KI E+MK LQ+L+PNSNKTDKASMLDE I+Y+K L
Sbjct: 82 GRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 141
Query: 344 QLQVKVLS-MSRLGAAGAVLPLI 365
QLQV+ L+ M+ LG LP +
Sbjct: 142 QLQVQTLAVMNGLGLNPMQLPPV 164
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR KI+ERM+ LQELVPN +K T+ + MLD ++Y+K LQ
Sbjct: 357 CKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQ 416
Query: 345 LQVKVLSMSR 354
QV+ LS +R
Sbjct: 417 KQVQTLSDNR 426
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR ++ D H+ +ER RR++I E++K LQEL+PN KTDK SMLDE IDY+K LQLQ+++L
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
Query: 351 SMSRLGAAGAVLP 363
M + G A V P
Sbjct: 77 VMGK-GMAPVVPP 88
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR KI+ERM+ LQELVPN +K T+ + MLD ++Y+K LQ
Sbjct: 357 CKLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQ 416
Query: 345 LQVKVLSMSR 354
QV+ LS +R
Sbjct: 417 KQVQTLSDNR 426
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 49/58 (84%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++LSM
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K RA RG AT+P S+ R RRE+I ER++ LQ LVPN K D ++ML+E YVKFLQ
Sbjct: 191 KTCARASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQ 250
Query: 345 LQVKVLS 351
LQ+K+LS
Sbjct: 251 LQIKLLS 257
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI E+++ LQ +VP KT A MLDEII+YV+ LQ
Sbjct: 154 VHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQ 213
Query: 345 LQVKVLSMSRLGAA 358
QV+ LS+ +L AA
Sbjct: 214 HQVEFLSL-KLTAA 226
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R +A + H+++ER RR++I E+M+ LQEL+P NK+DKASMLDE I+Y+K LQLQV+++
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 416
Query: 351 SM 352
SM
Sbjct: 417 SM 418
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + +A RG A+DP S+ R RRE+I +R+K LQ LVPN K D ++ML++ + YVKFLQ
Sbjct: 129 KRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQ 188
Query: 345 LQVKVLS 351
LQ+K+LS
Sbjct: 189 LQIKLLS 195
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQEL PN +K T+ A MLD ++Y+K LQ
Sbjct: 331 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQ 390
Query: 345 LQVKVLSMSRL 355
QVK L+ +++
Sbjct: 391 KQVKTLNDTKV 401
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%), Gaps = 6/81 (7%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQEL--VPNSNKTDKASMLDEIIDYVKFLQLQV 347
ARR +A + H+++ER RR++I E+M+ LQEL +P+ NKTDKASMLDE I+Y+K LQLQ+
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQL 221
Query: 348 KVLSMSRLGAAGAVLPLITDG 368
+V+ M +G PL+ G
Sbjct: 222 RVMWM----GSGMAPPLMFPG 238
>gi|388500044|gb|AFK38088.1| unknown [Medicago truncatula]
Length = 325
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 294 QATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMS 353
Q ++ ++R R ++IA+ +K L EL+P + +A +LD+IIDYVK+LQ+QVK LS S
Sbjct: 190 QKSEKTRYSDRQRTQRIADNLKALHELLPTPHVGSQAYILDDIIDYVKYLQIQVKELSGS 249
Query: 354 RLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAM 413
+L A +PL+ G + Q LN EE + L+E N
Sbjct: 250 KLQADSNFIPLVF----HEGYGHYIKEQV-------LNE---PLEEIMGNLLEVNSAATC 295
Query: 414 QYLQNKGLCLMPIALATAI 432
Q L+NKGL L+PIAL +
Sbjct: 296 QLLENKGLVLLPIALVDEL 314
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+ +ER RR++I E+M+ LQ+L+PNSNKTDKASML+E I+Y+K LQ Q++V
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQV 415
Query: 350 LSMSRLGAAGAVLPLITDGQAEASKGL 376
+ M G + P I ++ G+
Sbjct: 416 MWMGS-GMTPVMFPGIQHYMSQMGMGM 441
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI E+++ LQ +VP KT A MLDEII+YV+ LQ
Sbjct: 153 VHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQ 212
Query: 345 LQVKVLSMSRLGAA 358
QV+ LS+ +L AA
Sbjct: 213 HQVEFLSL-KLTAA 225
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R ++R +A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQ
Sbjct: 118 RSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 177
Query: 347 VKVL 350
V+ L
Sbjct: 178 VQYL 181
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 183 SYEEVSSLS-SVIEQPR----TRGFYLQGATMNHDVDTTGNRYVGMDKILQFDYLSASIV 237
S+ +V S+S VI+ P T F L +M+ GN + Y ++IV
Sbjct: 42 SHHQVDSISPRVIKTPNSFETTSSFGLTSNSMSKPATNHGNG--------DWLYSGSTIV 93
Query: 238 AKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATD 297
G + P + RP T S P+ G NG K + D
Sbjct: 94 NIGSRHESTSPKLAGNKRPFTGENT--------QLSKKPSSGTNGKIKPKATT---SPKD 142
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGA 357
P S+A + RRE+I+ER+K LQELVPN K D +ML++ I YVKFLQ+QVKVL A
Sbjct: 143 PQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL------A 196
Query: 358 AGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQ 394
A P A+ K +S Q + +D L+S Q
Sbjct: 197 ADEFWP------AQGGKAPDIS-QVKEAIDAILSSSQ 226
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 408
Query: 351 SMSRLGAAGAVLPLI 365
+M G+ + P++
Sbjct: 409 AM---GSGLCIPPML 420
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI RM+ L+ELVP +K + A +LDEII++V+ LQ Q
Sbjct: 180 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 239
Query: 347 VKVLSMSRLGA 357
V+ LSM RL A
Sbjct: 240 VEYLSM-RLAA 249
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 316
Query: 350 LSM 352
+SM
Sbjct: 317 MSM 319
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
R R +RG ATDP S+ R RREKIAER++ LQ L+PN K D +MLDE + YV+FL+ Q
Sbjct: 446 RPRVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQ 505
Query: 347 V 347
V
Sbjct: 506 V 506
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 19/108 (17%)
Query: 271 TASANPTGGCNGTGKAR-----------------VRARRGQATDPHSIAERLRREKIAER 313
TAS N T N G ++ VRA+RGQATD HSIAER+RREKI +
Sbjct: 114 TASTNETKKKNNLGGSKKGENKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINNK 173
Query: 314 MKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGA 360
++ LQ+LVP +++ A ML+EII+YV LQ QV+ LSM L AA +
Sbjct: 174 LRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSM-ELAAASS 220
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 183 SYEEVSSLS-SVIEQPR----TRGFYLQGATMNHDVDTTGNRYVGMDKILQFDYLSASIV 237
S+ +V S+S VI+ P T F L +M+ GN + Y ++IV
Sbjct: 110 SHHQVDSISPRVIKTPNSFETTSSFGLTSNSMSKPATNHGNG--------DWLYSGSTIV 161
Query: 238 AKGEQELPNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATD 297
G + P + RP T S P+ G NG K + D
Sbjct: 162 NIGSRHESTSPKLAGNKRPFTGENT--------QLSKKPSSGTNGKIKPKATT---SPKD 210
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGA 357
P S+A + RRE+I+ER+K LQELVPN K D +ML++ I YVKFLQ+QVKVL A
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL------A 264
Query: 358 AGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQ 394
A P A+ K +S Q + +D L+S Q
Sbjct: 265 ADEFWP------AQGGKAPDIS-QVKEAIDAILSSSQ 294
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+R + + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 218
Query: 351 SMSRLGAAGAVLPLI 365
+M G+ + P++
Sbjct: 219 AM---GSGLCIPPML 230
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
+ RAR+G A DP SIA R+RRE+I+ER+K LQ L+PN +K D +ML++ I YV+ L+ Q
Sbjct: 638 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQ 697
Query: 347 VKVL 350
+K+L
Sbjct: 698 IKML 701
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RM+ L+ELVP +K + A +LDEII++V+ LQ
Sbjct: 106 HVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQR 165
Query: 346 QVKVLSMSRLGA 357
QV+ LSM RL A
Sbjct: 166 QVEYLSM-RLAA 176
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 49/58 (84%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++L+M
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 245
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN-KTDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN + +T+ A MLD + Y+K LQ
Sbjct: 303 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQE 362
Query: 346 QVKVLSMSR 354
QVK L SR
Sbjct: 363 QVKALEESR 371
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
A+ R+ R ATDP S+ + RRE+I R++ LQ LVPN K D ++ML+E + YVKFLQL
Sbjct: 202 AKTRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFLQL 261
Query: 346 QVKVLSMSRLGAAGAVLPL-ITDGQ 369
Q+K+LS L V+ + DGQ
Sbjct: 262 QIKLLSSDELWMYAPVVHSGMIDGQ 286
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI RM+ L+ELVP +K + A +LDEII++V+ LQ Q
Sbjct: 193 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 252
Query: 347 VKVLSMSRLGA 357
V+ LSM RL A
Sbjct: 253 VEYLSM-RLAA 262
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A H+ +ER RR++I ++MK LQ+LVPNS+KTDKASMLDE+I+Y+K LQ QV+++
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 279
Query: 351 SM 352
S+
Sbjct: 280 SV 281
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD +DY+K LQ
Sbjct: 29 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQK 88
Query: 346 QVKVLSMSR 354
Q K LS +R
Sbjct: 89 QYKTLSDNR 97
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 51/60 (85%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R +A + H+ +ER RR++I E+M+ LQEL+PNSNKTDKASML+E I+Y+K LQLQ++V
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLEEAIEYLKMLQLQLQV 78
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A H+ +ER RR++I ++MK LQ+LVPNS+KTDKASMLDE+I+Y+K LQ QV+++
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 241
Query: 351 SM 352
S+
Sbjct: 242 SV 243
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRA+RGQATD HS+AER+RR KI E+++ LQ +VP KT A MLDEII+YV+ LQ
Sbjct: 125 VHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 184
Query: 345 LQVKVLSMSRLGAA 358
QV+ LSM +L AA
Sbjct: 185 HQVEFLSM-KLNAA 197
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 54/72 (75%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R +A H+++ER RR++I E+MK LQEL+P+ NK DKASMLDE I+Y+K LQLQ++V
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQLQV 306
Query: 350 LSMSRLGAAGAV 361
+ M AA V
Sbjct: 307 VWMGGGIAAAGV 318
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A H+ +ER RR++I E+MK LQ+LVPN++KTDKASMLDE+I+Y+K LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQF 316
Query: 350 LSM 352
+S+
Sbjct: 317 MSV 319
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI RM+ L+ELVP +K + A +LDEII++V+ LQ Q
Sbjct: 80 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 139
Query: 347 VKVLSMSRLGA 357
V+ LSM RL A
Sbjct: 140 VEYLSM-RLAA 149
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R ++ + HS++E+ RR++I ++M++LQEL+PN K DK S+LDE IDY+K LQLQV+V
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQV 438
Query: 350 LSMSRLGAAGAVLPLI 365
+SM GA + P++
Sbjct: 439 MSM---GAGMCMAPVM 451
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
+ RAR+G A DP SIA R+RRE+I+ER+K LQ L+PN +K D +ML++ I YV+ L+ Q
Sbjct: 821 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQ 880
Query: 347 VKVL 350
+K+L
Sbjct: 881 IKML 884
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT------DKASMLDEIIDYV 340
VRARRGQATD HSIAER+RREKI R++ LQ+LVP K A MLDEII+YV
Sbjct: 147 HVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDEIINYV 206
Query: 341 KFLQLQVKVLSMSRLGAAGAV 361
LQ QV+ LS L AA ++
Sbjct: 207 HSLQNQVEFLS-RELAAASSL 226
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQATD HS+AER RREKI RM+ L+ELVP +K + A +LDEII++V+ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 205
Query: 347 VKVLSMSRLGA 357
V+ LSM RL A
Sbjct: 206 VEYLSM-RLAA 215
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R + + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 390
Query: 350 LSM 352
+SM
Sbjct: 391 MSM 393
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+++ LQELVP+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 281
Query: 351 SMSRLGAAGAVLPLITDG 368
M+ ++P++ G
Sbjct: 282 WMT-----TGIVPMMFPG 294
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
RR ++ + H+ +ER RR++I E++K LQEL+PN KTDK SMLDE IDY+K LQLQ+++
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 74
Query: 350 LSMSRLGAAGAVLP 363
L M + G A V P
Sbjct: 75 LVMGK-GMAPVVPP 87
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+++ LQELVP+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 284
Query: 351 SMSRLGAAGAVLPLITDG 368
M+ ++P++ G
Sbjct: 285 WMT-----TGIVPMMFPG 297
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQEL PN +K T+ A MLD ++Y+K LQ
Sbjct: 169 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQ 228
Query: 345 LQVKVLSMSRL 355
QVK L+ +++
Sbjct: 229 KQVKTLNDTKV 239
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+++ LQELVP+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 285
Query: 351 SMSRLGAAGAVLPLITDG 368
M+ ++P++ G
Sbjct: 286 WMT-----TGIVPMMFPG 298
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YV
Sbjct: 172 GSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYV 231
Query: 341 KFLQLQVKVLS 351
K LQ Q++ L+
Sbjct: 232 KALQGQIQELT 242
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
K R +R H+++E+ RR KI E+MK LQ+L+PNSNKTDKASMLDE I+Y+K L
Sbjct: 83 AKQRNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 142
Query: 344 QLQVKVLS-MSRLGAAGAVLPLI 365
QLQV+ L+ M+ LG LP +
Sbjct: 143 QLQVQTLAVMNGLGLNPMRLPQV 165
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN +K T+ + MLD ++Y+K LQ
Sbjct: 354 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQN 413
Query: 346 QVKVLSMSR 354
QV+ LS +R
Sbjct: 414 QVETLSDNR 422
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
G+ R +R H+++E+ RR KI E+MK LQ+L+PNSNKTDKASMLDE I+Y+K L
Sbjct: 82 GRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQL 141
Query: 344 QLQVKVLS-MSRLG 356
QLQV+ L+ M+ LG
Sbjct: 142 QLQVQTLAVMNGLG 155
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R + + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 390
Query: 350 LSM 352
+SM
Sbjct: 391 MSM 393
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+++ LQELVP+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 460
Query: 351 SMSRLGAAGAVLPLITDG 368
M+ ++P++ G
Sbjct: 461 WMT-----TGIVPMMFPG 473
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
K R +R H+++E+ RR KI E+MK LQ+L+PNSNKTDKASMLDE I+Y+K L
Sbjct: 83 AKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 142
Query: 344 QLQVKVLS-MSRLGAAGAVLPLI 365
QLQV+ L+ M+ LG LP +
Sbjct: 143 QLQVQTLAVMNGLGLNPMRLPQV 165
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
K R +R H+++E+ RR KI E+MK LQ+L+PNSNKTDKASMLDE I+Y+K L
Sbjct: 83 AKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 142
Query: 344 QLQVKVLS-MSRLGAAGAVLPLI 365
QLQV+ L+ M+ LG LP +
Sbjct: 143 QLQVQTLAVMNGLGLNPMRLPQV 165
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
A+R + + H+++ER RR++I E+M+ LQEL+PN NK DK+SML+E I+Y+K LQLQV++
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQM 377
Query: 350 LSM 352
+SM
Sbjct: 378 MSM 380
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 54/68 (79%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
T AR R +R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLD+ I+Y+K
Sbjct: 21 TRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQ 80
Query: 343 LQLQVKVL 350
LQLQV+++
Sbjct: 81 LQLQVQMI 88
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
VRARRGQATD HS+AER RREKI RM+ L+ELVP +K + A +LDEII++V+ LQ
Sbjct: 156 HVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQR 215
Query: 346 QVKVLSM 352
QV+ LSM
Sbjct: 216 QVEYLSM 222
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSN-KTDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN + +T+ A MLD + Y+K LQ
Sbjct: 302 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQE 361
Query: 346 QVKVLSMSR 354
QVK L +R
Sbjct: 362 QVKTLEETR 370
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+++ LQELVP+ NKTDKAS+LDE I+Y+K LQ+QV+++
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 384
Query: 351 SMSRLGAAGAVLPLITDG 368
M+ ++P++ G
Sbjct: 385 WMT-----TGIVPMMFPG 397
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + +A +G ATDP S+ R RRE+I +R++ LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 237 KGKTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQ 296
Query: 345 LQVKVLSMSRL 355
LQ K+LS L
Sbjct: 297 LQNKLLSSDDL 307
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD + Y+K LQ
Sbjct: 269 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQ 328
Query: 345 LQVKVLSMSR 354
Q K LS +R
Sbjct: 329 KQYKTLSDNR 338
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 267 SLQQTASANPTGGCNGTG---KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPN 323
S ++ ++P C T + R+R+G A DP SIA R RRE+I++R+K LQ+LVPN
Sbjct: 209 SKREKIDSSPASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPN 268
Query: 324 SNKTDKASMLDEIIDYVKFLQLQVKV 349
+K D +ML++ I+YVKF+QLQ++
Sbjct: 269 GSKVDLVTMLEKAINYVKFMQLQLQA 294
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P SIAER+RR +I+ERM+ LQ+L PN +K T+ A MLD ++Y+
Sbjct: 344 GSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYI 403
Query: 341 KFLQLQVKVL 350
K LQ QVK L
Sbjct: 404 KDLQKQVKTL 413
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YVK LQ
Sbjct: 179 CRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQ 238
Query: 345 LQVKVLS 351
Q++ L+
Sbjct: 239 SQIQELT 245
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 267 SLQQTASANPTGGCNGTG---KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPN 323
S ++ ++P C T + R+R+G A DP SIA R RRE+I++R+K LQ+LVPN
Sbjct: 209 SKREKIDSSPASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPN 268
Query: 324 SNKTDKASMLDEIIDYVKFLQLQVKV 349
+K D +ML++ I+YVKF+QLQ++
Sbjct: 269 GSKVDLVTMLEKAINYVKFMQLQLQA 294
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 50/59 (84%)
Query: 294 QATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
+A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 234
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
G ++ + +R +A H+ +ER RR++I ++MK LQ+LVPNS+KTDKASMLDE+IDY+K
Sbjct: 263 GAMRSSISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLK 322
Query: 342 FLQLQVKV 349
LQ QV+V
Sbjct: 323 QLQAQVQV 330
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R + + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 269
Query: 350 LSM 352
+SM
Sbjct: 270 MSM 272
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 50/59 (84%)
Query: 294 QATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
+A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++LSM
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + RA R T+P SI R RRE+I ER+K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 223 KGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVKFLQ 282
Query: 345 LQVKVLS 351
LQ+++LS
Sbjct: 283 LQIRLLS 289
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 29/157 (18%)
Query: 280 CNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
CNG A + +P S+A R RR+KI+ER++ L++L+P NK D A+MLDE I+Y
Sbjct: 379 CNGKPAA-------TSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEY 431
Query: 340 VKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQ---ADQGV----DISLNS 392
VKFLQLQV++L L A PL AS G +L Q A QG+ D SL
Sbjct: 432 VKFLQLQVQILESDTLDNA----PLT------ASNGQNLPLQGSRAKQGLKRKGDTSLGG 481
Query: 393 DQ---IAFEEEVVKLMESNVTKAMQYLQNKGLCLMPI 426
D ++ L+ S V + Q L + LCL+ I
Sbjct: 482 DSSPALSVRAATSPLILSEVLQ--QQLFKQKLCLVSI 516
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 270 QTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDK 329
Q+AS G T + RAR+G A DP SIA R+RRE+I+ER+K LQ L+PN +K D
Sbjct: 31 QSASGRALGPALNTN-LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDM 89
Query: 330 ASMLDEIIDYVKFLQLQVKVL 350
+ML++ I YV+ L+LQ+K+L
Sbjct: 90 VTMLEKAITYVQCLELQIKML 110
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 79.0 bits (193), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 50/59 (84%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
+RG+A + H+++ER RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+V
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R + + H+++ER RR++I E+M+ LQEL+PN NK DKASML+E I+Y+K LQLQV++
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 174
Query: 350 LSM 352
+SM
Sbjct: 175 MSM 177
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 275 NPTGGCNGTGKARVRARRGQAT---DPHSIAERLRREKIAERMKNLQELVPNSNKTDKAS 331
+P C G G+ +A+ T DP S+A + RRE+I+ER++ LQELVPN K D +
Sbjct: 192 SPKKHC-GAGRKASKAKSPSTTPTKDPQSLAAKNRRERISERLRTLQELVPNGTKVDLVT 250
Query: 332 MLDEIIDYVKFLQLQVKVLS 351
ML++ I YVKFLQLQVKVL+
Sbjct: 251 MLEKAISYVKFLQLQVKVLA 270
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+ +ER RR++I E+M++LQEL+P+ NK DKAS+LDE I+Y+K LQ+QV+V+
Sbjct: 203 RRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 262
Query: 351 SMS 353
M+
Sbjct: 263 WMT 265
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+ +ER RR++I E+M++LQEL+P+ NK DKAS+LDE I+Y+K LQ+QV+V+
Sbjct: 194 RRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 253
Query: 351 SMS 353
M+
Sbjct: 254 WMT 256
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD ++Y+K LQ
Sbjct: 319 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQ 378
Query: 345 LQVKVLSMSR 354
Q L+ +R
Sbjct: 379 KQYNTLTDNR 388
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD ++Y+K LQ
Sbjct: 308 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQ 367
Query: 345 LQVKVLSMSR 354
Q L+ +R
Sbjct: 368 KQYNTLTDNR 377
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 280 CNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
CN K + + + + DP SIA + RRE+I+ER+K LQELVPN +K D +ML++ I Y
Sbjct: 218 CNSATK-KQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 276
Query: 340 VKFLQLQVKVLSMSRL 355
VKFLQLQVKVL+
Sbjct: 277 VKFLQLQVKVLATDEF 292
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
G+ +++ ++T+ H+++ER RR++I ERM+ LQEL+PN NK DKASMLDE I+Y+K L
Sbjct: 419 GRGVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSL 478
Query: 344 QLQVKVLSMSRLGAAGAVLPL 364
QLQ++++SM G G +P+
Sbjct: 479 QLQLQIMSM---GGGGLYMPM 496
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++L+M
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 181
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++LSM
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 198
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P SIAER+RR +I+ER+K LQ+L P S K T A MLD ++Y+
Sbjct: 360 GSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYI 419
Query: 341 KFLQLQVKVLS 351
K LQ +VK+LS
Sbjct: 420 KDLQQKVKILS 430
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 79.0 bits (193), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/58 (65%), Positives = 43/58 (74%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
G ATDP S+ R RREKI ER+KNLQ LVPN K D +MLDE I YVKFLQ QV++L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELL 58
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 50/59 (84%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
A+R +A + H+++ER RR++I E+MK LQEL+P+ NKTDKASMLDE I+Y+K LQLQ++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 368
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 50/59 (84%)
Query: 294 QATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
+A + H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR KI+ERM+ LQ+LVPN +K T+ A MLD +DY+K LQ
Sbjct: 331 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQK 390
Query: 346 QVKVL 350
Q + L
Sbjct: 391 QAQKL 395
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 273 SANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASM 332
S P G TGKA+ + DP S+A + RRE+I+ER+K LQELVPN K D +M
Sbjct: 181 SKKPNSGV--TGKAKPKPTTS-PKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTM 237
Query: 333 LDEIIDYVKFLQLQVKVLSMSRLGAA-GAVLPLIT 366
L++ I YVKFLQ+QVKVL+ A G P I+
Sbjct: 238 LEKAISYVKFLQVQVKVLATDEFWPAQGGKAPDIS 272
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
G A DP SIA + RRE+I+ER+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 290
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ERM+ LQEL PN +K T+ A MLD ++++K LQ
Sbjct: 336 KIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQK 395
Query: 346 QVKVLS 351
QVK L+
Sbjct: 396 QVKTLT 401
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS-MSRLGA 357
H+++E+ RR KI E+MK LQ+L+PNSNKTDKASMLDE I+Y+K LQLQV+ L+ M+ LG
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLGL 153
Query: 358 AGAVLPLI 365
LP +
Sbjct: 154 NPMRLPPV 161
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R ++ + HS++E+ RR++I ++M++LQEL+PN K DK S+LDE IDY+K LQLQV+V
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQV 69
Query: 350 LSMSRLGAAGAVLPLI 365
+SM GA + P++
Sbjct: 70 MSM---GAGMCMAPVM 82
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 268 LQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT 327
+Q T + P C KA + + DP S+A + RRE+I+ER+K LQELVPN +K
Sbjct: 186 MQATNAKKP---CTSASKA-AKPKLNPFKDPQSVAAKNRRERISERLKILQELVPNGSKV 241
Query: 328 DKASMLDEIIDYVKFLQLQVKVLS 351
D +ML++ I YVKFLQLQVKVL+
Sbjct: 242 DLVTMLEKAISYVKFLQLQVKVLA 265
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 10/80 (12%)
Query: 287 RVRARRGQATDPHSIAERL--------RREKIAERMKNLQELVPNSNKTD-KASMLDEII 337
VRARRGQATD HS+AER+ RREKI RMK LQELVP +K A +LDEII
Sbjct: 128 HVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEII 187
Query: 338 DYVKFLQLQVKVLSMSRLGA 357
++V+ LQ QV++LSM RL A
Sbjct: 188 NHVQTLQRQVEMLSM-RLAA 206
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
+RR +A H+ +ER RR++I ++MK LQ+LVPN++KTDKASMLDE+I+Y+K LQ QV+
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQA 302
Query: 350 LSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISL 390
+S+ + ++PL Q L +S A G+ +SL
Sbjct: 303 MSVRNM--PQMMMPLGMQQQ------LQMSLLARMGMGVSL 335
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 29/120 (24%)
Query: 286 ARVRARRGQATDPHSIAERL-------------RREKIAERMKNLQELVPNSNKTDKASM 332
+ RA RG ATDP S+ RL RRE+I ER++ LQ LVPN K D ++M
Sbjct: 235 GKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTM 294
Query: 333 LDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNS 392
L+E + YVKFLQLQ+K+LS L P+ +G D G+D+ LN+
Sbjct: 295 LEEAVQYVKFLQLQIKLLSSDDLWMYA---PIAYNGM-------------DIGLDLKLNA 338
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
H+++E+ RR +I E+MK LQ L+PNSNKTDKASMLDE I+Y+K LQLQV++LS+
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSL 169
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQELVPN +K T+ A MLD ++Y+K LQ
Sbjct: 194 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQ 253
Query: 345 LQVKVLSMSR 354
Q L+ +R
Sbjct: 254 KQYNTLTDNR 263
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
RARRGQATD H++AER+RR KI E+++ LQ +VP KT A MLDEII+YV+ LQ Q
Sbjct: 151 ARARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQ 210
Query: 347 VKVLSMSRLGAA 358
V+ LS+ A+
Sbjct: 211 VEFLSLELTAAS 222
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 275 NPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLD 334
N C KA + + + DP S+A + RRE+I+ER+K LQELVPN +K D +ML+
Sbjct: 5 NAKKPCTSASKA-AKPKSNPSQDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLE 63
Query: 335 EIIDYVKFLQLQVKVLS 351
+ I YVKFLQLQVKVL+
Sbjct: 64 KAISYVKFLQLQVKVLA 80
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKAS-MLDEIIDYVKFLQL 345
R RA+RG AT P SIAER+RR +I+ERMK LQ+LVPN KT S MLDE ++YVK LQ+
Sbjct: 2 RARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQM 61
Query: 346 QVKVL--SMSRLGAAGAVLP 363
+VK L ++++L AA + P
Sbjct: 62 KVKELTETIAQLKAATQMSP 81
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 17/119 (14%)
Query: 238 AKGEQEL-PNHPLSCFSSRPLPTVPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQAT 296
A+G QE+ PNH R T + G +Q +A + + + A
Sbjct: 146 AEGTQEIVPNH------KRSHTTGESSGSVCKKQCTAA----------PKKQKPKSATAK 189
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 355
DP SIA + RRE+I+ER+K LQELVPN +K D +ML++ I YVKFLQLQVK+L+
Sbjct: 190 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEF 248
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER+RR +I++R++ LQELVPN +K T+ A ML+E ++YVK LQ
Sbjct: 82 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQ 141
Query: 345 LQVKVL 350
Q++ L
Sbjct: 142 KQIEEL 147
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ER++ LQELVP +K T A MLD +DY+K LQ
Sbjct: 302 KIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQK 361
Query: 346 QVKVLSMSR 354
Q K LS R
Sbjct: 362 QFKTLSDKR 370
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 51/64 (79%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
R RR + H+++E+ RREKI ++M+ L+EL+PN NK DKASMLD+ IDY+K L+LQ++
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQ 380
Query: 349 VLSM 352
++SM
Sbjct: 381 IMSM 384
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+ +ER RR++I E+M++LQEL+P+ NK DKAS+LDE I+Y+K LQ+Q++++
Sbjct: 232 RRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQIM 291
Query: 351 SMSRLGAAGAVLP 363
M+ G A + P
Sbjct: 292 WMT-TGMAPMMFP 303
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 279 GCNGTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEI 336
G GT +AR +R +A + H++AER RREKI E+MK LQEL+P NK+ K S LD
Sbjct: 121 GVQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLDAA 180
Query: 337 IDYVKFLQLQVKVLSM 352
I+YVK+LQ Q++++ M
Sbjct: 181 IEYVKWLQSQIQMILM 196
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 278 GGCNGTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDE 335
G GT +AR +R +A + H++AER RREKI E+MK LQEL+P NK+ K S L++
Sbjct: 1554 AGIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLED 1613
Query: 336 IIDYVKFLQLQVKVLSM 352
+I+YVK L++Q++ M
Sbjct: 1614 VIEYVKSLEMQIQHYVM 1630
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 282 GTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
GT +AR +R +A + H++AER RREKI E+MK LQEL+P NK+ K S L+++I+Y
Sbjct: 1128 GTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEY 1187
Query: 340 VKFLQLQVKVLS 351
+K LQ+Q++++S
Sbjct: 1188 MKSLQMQIQMMS 1199
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 282 GTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
GT +AR + +R + + H++AER RREKI E +K LQEL+P NK+ K S LD+ I+Y
Sbjct: 570 GTEEARGSMSRKRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEY 629
Query: 340 VKFLQLQVKVLSMSRLGAAGAVLPLITDGQAE 371
VK+LQ Q++++S + G + P++ G +
Sbjct: 630 VKWLQSQIQMMSTGQ----GMMPPMMYAGNTQ 657
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 77.8 bits (190), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 42/58 (72%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
G ATDP S+ R RREKI ER+K LQ LVPN K D +MLDE I YV+FLQLQV +L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLL 58
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 282 GTGKARVRARRGQAT---DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIID 338
G G+ +A+ T DP S+A + RRE+I+ER++ LQELVPN K D +ML++ I
Sbjct: 188 GAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAIS 247
Query: 339 YVKFLQLQVKVLS 351
YVKFLQLQVKVL+
Sbjct: 248 YVKFLQLQVKVLA 260
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 356
DP S+A + RRE+I+ER++ LQELVPN K D +ML++ I YVKFLQLQVKVL+
Sbjct: 203 DPQSLAAKNRRERISERLRALQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 262
Query: 357 -AAGAVLPLITDGQAEASKGLSLSPQADQG 385
A G P I+ + LS + Q+ +G
Sbjct: 263 PAQGGKAPEISQVREALDAILSSASQSQRG 292
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
R RA+RG AT P SIAER+RR +I+ERM+ LQ+LVPN +K T+ + MLD +DY+K LQ
Sbjct: 31 RTRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQR 90
Query: 346 QVKVLSMSR 354
QV+ LS R
Sbjct: 91 QVQTLSEIR 99
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 260 VPTVGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQE 319
P PS + SA+P G+ +R +A + H+++ER RR++I E+MK LQE
Sbjct: 28 TPKPLWPSDVEYESADPKKQLRGS----TSTKRSRAAEVHNLSERRRRDRINEKMKALQE 83
Query: 320 LVPNSNK--------TDKASMLDEIIDYVKFLQLQVKVLSMSRL 355
L+P NK TDKASMLDE I+Y+K LQLQV++ ++ L
Sbjct: 84 LIPRCNKLSSFTDSQTDKASMLDEAIEYLKTLQLQVQIFVLNSL 127
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 274 ANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTD-KASM 332
A N G VRARRG+A D HS+AER+RR+KI+ +MK LQ LVP +KT K +
Sbjct: 122 ARKDATVNEDGFVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPI 181
Query: 333 LDEIIDYVKFLQLQVKVL 350
LD II+Y+ LQ QVK L
Sbjct: 182 LDTIINYIHSLQDQVKSL 199
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 282 GTGKARVRARRGQAT---DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIID 338
G G+ +A+ T DP S+A + RRE+I+ER++ LQELVPN K D +ML++ I
Sbjct: 172 GAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAIS 231
Query: 339 YVKFLQLQVKVLS 351
YVKFLQLQVKVL+
Sbjct: 232 YVKFLQLQVKVLA 244
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
++R +A + H+++E+ RR +I E+MK LQ L+PNS+KTDKASMLDE I+Y+K LQLQV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQG 193
Query: 350 LSMSRL 355
LS+ L
Sbjct: 194 LSVRFL 199
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 282 GTGKARVRARRGQAT---DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIID 338
G G+ +A+ T DP S+A + RRE+I+ER++ LQELVPN K D +ML++ I
Sbjct: 190 GAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAIS 249
Query: 339 YVKFLQLQVKVLS 351
YVKFLQLQVKVL+
Sbjct: 250 YVKFLQLQVKVLA 262
>gi|297599447|ref|NP_001047162.2| Os02g0564700 [Oryza sativa Japonica Group]
gi|255671012|dbj|BAF09076.2| Os02g0564700 [Oryza sativa Japonica Group]
Length = 136
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Query: 373 SKGLSLSPQADQG--------VDISLNSDQ-------IAFEEEVVKLMESNVTKAMQYLQ 417
S G LSP++ G V L DQ FE+EVVKLME N+T AMQYLQ
Sbjct: 10 SPGFLLSPRSSSGERQAGAGAVTGGLPGDQPELLDGGAMFEQEVVKLMEDNMTTAMQYLQ 69
Query: 418 NKGLCLMPIALATAISSGKASSSDTISEENK 448
+KGLCLMP+ALA+AIS+ K +SS + E K
Sbjct: 70 SKGLCLMPVALASAISAQKGTSSAAVRPEKK 100
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
DP S+A + RRE+I+ER++ LQELVPN K D +ML++ I YVKFLQLQVKVL+
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 260
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
+ RA A DP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQLQ
Sbjct: 263 KSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 322
Query: 347 VKVLSMSRLGAAGAVLPLITDG 368
+K+LS L P++ +G
Sbjct: 323 IKLLSSEDLWMYA---PIVYNG 341
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAA 358
H+++E+ RR +I E+MK LQ LVPNS+KTDKASMLD+ I+Y+K LQLQV++LSM
Sbjct: 70 HNLSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN---- 125
Query: 359 GAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQY 415
G LP Q G P A Q + ++N + I +V L+ N Q+
Sbjct: 126 GLYLP-----QVNLPVGAPEPPAAPQ-MPATVNQNSIEASNPLVALLPMNQISGAQH 176
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVK 341
TG VRARRG+ATD HS+AER+RRE+I+ +MK LQ LVP ++ T KA +LDEII YV+
Sbjct: 72 TGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQ 131
Query: 342 FLQLQVKVLSMSRLGAAGAVLPLITD 367
L+ R+G+ A L L+ +
Sbjct: 132 SLK--------DRIGSLEAELVLVNE 149
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GKA+ R ATDP S+ R RRE+I ER+K LQ LVPN K D ++ML+E + YVKFL
Sbjct: 219 GKAQSGHR--SATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFL 276
Query: 344 QLQVKVLS 351
QLQ+K+LS
Sbjct: 277 QLQIKLLS 284
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
GKA+ R ATDP S+ R RRE+I ER+K LQ LVPN K D ++ML+E + YVKFL
Sbjct: 219 GKAQSGHR--SATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFL 276
Query: 344 QLQVKVLS 351
QLQ+K+LS
Sbjct: 277 QLQIKLLS 284
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 285 KARVRARRG-QATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFL 343
+ R R +R + H+++ER RR+KI E+++ L+EL+PN NK DKASMLD+ IDY+K L
Sbjct: 198 RERNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTL 257
Query: 344 QLQVKVLSMSR 354
+LQ++++SM R
Sbjct: 258 KLQLQIMSMGR 268
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K + R G A+DP + + RRE+I ER+K LQ LVPN K D ++ML+E + YVKFLQ
Sbjct: 235 KGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQ 294
Query: 345 LQVKVLS 351
+Q+K+LS
Sbjct: 295 VQIKLLS 301
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
+RA RG AT P SIAER+RR KI+ERMK LQ+LVP+ ++ T+ A MLD+ ++YVK LQ Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 347 VKVLS 351
V+ LS
Sbjct: 123 VQELS 127
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P SIAER RR +I+ R+K LQ+L P S+K T A MLD ++Y+
Sbjct: 354 GSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYI 413
Query: 341 KFLQLQVKVLSMSR 354
K LQ QVK+L +R
Sbjct: 414 KDLQKQVKILRDTR 427
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRARRG AT P SIAER RR +I++R+K LQ+LVPN +K T+ + MLD +DY+K L+
Sbjct: 278 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELK 337
Query: 345 LQVKVL 350
QV+ L
Sbjct: 338 DQVEKL 343
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
+ DP S+A + RRE+I+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 292 RGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
R TDP S+ R RRE+I ER+K LQ LVPN K D ++ML+E + YVKFLQLQ+K+LS
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 281
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
+ DP S+A + RRE+I+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 76.3 bits (186), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFL 343
+ R RA+RG AT P SIAER+RR +I+ERMK LQ+LVPN K T+ A MLDE ++YVK L
Sbjct: 2 QMRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSL 61
Query: 344 QLQVKVL 350
Q++V L
Sbjct: 62 QVKVSEL 68
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 61/133 (45%), Gaps = 59/133 (44%)
Query: 279 GCNGTGKA------------RVRARRGQATDPHSIAERL--------------------- 305
G NG GK VRARRGQATD HS+AER+
Sbjct: 257 GGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFA 316
Query: 306 -----------RREKIAERMKNLQELVPNSNK---------------TDKASMLDEIIDY 339
RREKI+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 317 DAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINY 376
Query: 340 VKFLQLQVKVLSM 352
V+ LQ QV+ LSM
Sbjct: 377 VQSLQRQVEFLSM 389
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 61/133 (45%), Gaps = 59/133 (44%)
Query: 279 GCNGTGKA------------RVRARRGQATDPHSIAERL--------------------- 305
G NG GK VRARRGQATD HS+AER+
Sbjct: 257 GGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFA 316
Query: 306 -----------RREKIAERMKNLQELVPNSNK---------------TDKASMLDEIIDY 339
RREKI+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 317 DAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINY 376
Query: 340 VKFLQLQVKVLSM 352
V+ LQ QV+ LSM
Sbjct: 377 VQSLQRQVEFLSM 389
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 354
H+++ER RR+KI E+++ L+EL+PN NK DKASMLD+ IDY+K L+LQ++++SM R
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMGR 268
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
GTGK+ V ++R +A H+ +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+K
Sbjct: 270 GTGKSSVSSKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLK 329
Query: 342 FLQLQVK 348
LQ QV+
Sbjct: 330 QLQAQVQ 336
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 283 TGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
TGK + + DP S+A + RRE+I+ER+K LQELVPN K D +ML++ I YVKF
Sbjct: 191 TGKTKPKPTTS-PKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKF 249
Query: 343 LQLQVKVLSMSRLGAA-GAVLPLIT 366
LQ+QVKVL+ A G P I+
Sbjct: 250 LQVQVKVLATDEFWPAQGGKAPDIS 274
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVK 348
ARRGQATD HS+AER RREKI RM+ L+ELVP +K + A +LDEII++V+ LQ QV+
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 349 VLSMSRLGAA 358
LSM RL A
Sbjct: 61 YLSM-RLAAV 69
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 61/133 (45%), Gaps = 59/133 (44%)
Query: 279 GCNGTGKA------------RVRARRGQATDPHSIAERL--------------------- 305
G NG GK VRARRGQATD HS+AER+
Sbjct: 136 GGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFA 195
Query: 306 -----------RREKIAERMKNLQELVPNSNK---------------TDKASMLDEIIDY 339
RREKI+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 196 DAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINY 255
Query: 340 VKFLQLQVKVLSM 352
V+ LQ QV+ LSM
Sbjct: 256 VQSLQRQVEFLSM 268
>gi|359479869|ref|XP_003632365.1| PREDICTED: uncharacterized protein LOC100853547 [Vitis vinifera]
Length = 352
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 24/151 (15%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K R A R +A S +R RR +I+ER+K LQ L+P+S + KAS+LD+IIDY+K LQ
Sbjct: 219 KPRSSASRQRA----SATDRRRRLRISERLKALQVLLPHS-EGGKASVLDDIIDYIKHLQ 273
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQI---AFEEEV 401
LQ+K LS SRLG GQ+ + + L +G + DQ+ EE +
Sbjct: 274 LQIKDLSQSRLG-----------GQSTSDPFIFL-----EGYGHYILHDQMLKEPLEEMM 317
Query: 402 VKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
KL+E N ++A Q L+ +GL +MP+ L +
Sbjct: 318 GKLLEVNPSEATQLLEGRGLYVMPMTLVEGL 348
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
RVRA+RG AT P SIAER RR +I++R++ LQ+LVPN +K T+ + MLD +DY+K LQ
Sbjct: 299 RVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQD 358
Query: 346 QVKVL 350
Q++ L
Sbjct: 359 QIEKL 363
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
RVRA+RG AT P SIAER RR +I++R++ LQ+LVPN +K T+ + MLD +DY+K LQ
Sbjct: 294 RVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQD 353
Query: 346 QVKVL 350
Q++ L
Sbjct: 354 QIEKL 358
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAA 358
H+ +ER RR++I E++K LQEL+PN KTDK SMLDE IDY+K LQLQ+++L M + G A
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK-GMA 76
Query: 359 GAVLP 363
V P
Sbjct: 77 PVVPP 81
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 55/68 (80%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
GTGK+ V ++R +A H+ +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+
Sbjct: 15 RGTGKSSVSSKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYL 74
Query: 341 KFLQLQVK 348
K LQ QV+
Sbjct: 75 KQLQAQVQ 82
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 11/86 (12%)
Query: 265 LPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 324
+PSL++ AS+ P + VR + DP S+A R RRE+I++R++ LQ LVP
Sbjct: 420 VPSLEEIASSRPK-------RRNVRISK----DPQSVAARHRRERISDRIRVLQRLVPGG 468
Query: 325 NKTDKASMLDEIIDYVKFLQLQVKVL 350
K D ASMLDE I YVKFL+LQ++ L
Sbjct: 469 TKMDTASMLDEAIHYVKFLKLQLQTL 494
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+MK LQEL+P+SNK+DKASMLDE I+Y+K LQLQ++++
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLM 394
Query: 351 SMSRLGAAGAVLPLITDG--QAEASKGLSLSP 380
M G V P++ G A G+ + P
Sbjct: 395 WM-----GGGVAPMMFPGVQHYMARMGMGMCP 421
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 75.5 bits (184), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/63 (60%), Positives = 44/63 (69%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
G ATDP S+ R RREKI ER+K+LQ LVPN K D +MLDE I YVKFLQ QV++L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELLKS 60
Query: 353 SRL 355
L
Sbjct: 61 DEL 63
>gi|296086723|emb|CBI32358.3| unnamed protein product [Vitis vinifera]
Length = 403
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 24/151 (15%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
K R A R +A S +R RR +I+ER+K LQ L+P+S + KAS+LD+IIDY+K LQ
Sbjct: 264 KPRSSASRQRA----SATDRRRRLRISERLKALQVLLPHS-EGGKASVLDDIIDYIKHLQ 318
Query: 345 LQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLSPQADQGVDISLNSDQI---AFEEEV 401
LQ+K LS SRLG GQ+ + + L +G + DQ+ EE +
Sbjct: 319 LQIKDLSQSRLG-----------GQSTSDPFIFL-----EGYGHYILHDQMLKEPLEEMM 362
Query: 402 VKLMESNVTKAMQYLQNKGLCLMPIALATAI 432
KL+E N ++A Q L+ +GL +MP+ L +
Sbjct: 363 GKLLEVNPSEATQLLEGRGLYVMPMTLVEGL 393
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAA 358
H +ER RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I Y+K LQ QV++++ ++ +
Sbjct: 239 HKQSERRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMMNWMKMYTS 298
Query: 359 GAVLPL 364
+LP+
Sbjct: 299 -MMLPI 303
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I E+MK LQEL+P+SNK+DKASMLDE I+Y+K LQLQ++++
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLM 394
Query: 351 SMSRLGAAGAVLPLITDG--QAEASKGLSLSP 380
M G V P++ G A G+ + P
Sbjct: 395 WM-----GGGVAPMMFPGVQHYMARMGMGMCP 421
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
R + +P SIA R RR+KI+ER++ L++LVP NK D ASMLDE I +VKFLQ+QV++L
Sbjct: 381 RFKETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
Query: 351 SMSRLGAAG 359
G G
Sbjct: 441 EAVGNGGHG 449
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
R + +P SIA R RR+KI+ER++ L++LVP NK D ASMLDE I +VKFLQ+QV++L
Sbjct: 381 RFKETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
Query: 351 SMSRLGAAG 359
G G
Sbjct: 441 EAVGNGGHG 449
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
+RA+RG AT P S+AER+RR +I+ERM+ LQE+VPN +K T + MLD ++Y+K LQ Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 347 VKVLSMSR 354
+K +S R
Sbjct: 303 LKTMSAKR 310
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 75.1 bits (183), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
G ATDP S+ R RREKIAER++ LQ L+PN K D +MLDE + YV+FL+ QV +L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLL 58
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER+RR +I+ER+K LQEL P+ +K T A ML+ ++Y+K LQ
Sbjct: 341 QIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQR 400
Query: 346 QVKVLS 351
QVK L+
Sbjct: 401 QVKTLT 406
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 296 TDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
TDP S+ R RREKI ER+K LQ LVPN K D ++ML+E + Y+KF+QLQ+K+LS
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLS 309
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ +KTDKAS+LDE IDY+K LQLQ++V+
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 312
Query: 351 SMSRLGAAGAVLPLITDG 368
M G+ A P++ G
Sbjct: 313 WM---GSGMAAAPMMFPG 327
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAA 358
H+ +ER RR++I E++K LQEL+PN KTDK SMLDE IDY+K LQ+Q+++L M + G A
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLVMGK-GTA 80
Query: 359 GAVLP 363
V P
Sbjct: 81 PVVPP 85
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P S+AER+RR +I+E++K L+ L P S+K T A MLD ++Y+
Sbjct: 161 GSVPCKIRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYI 220
Query: 341 KFLQLQVKVLSMSR 354
K LQ QVK L+ R
Sbjct: 221 KDLQEQVKTLTDCR 234
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 281 NGTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIID 338
GT +AR ++R +A H ++ER RR+KI E MK LQEL+P KTD++SMLD++I+
Sbjct: 262 QGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIE 321
Query: 339 YVKFLQLQVKVLSMSRL 355
YVK LQ Q+++ SM +
Sbjct: 322 YVKSLQSQIQMFSMGHV 338
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P SIAER+RR +I++R+K LQ L P S+K T A MLD ++Y+
Sbjct: 313 GSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYI 372
Query: 341 KFLQLQVKVLS 351
K LQ QV++L+
Sbjct: 373 KDLQEQVQILT 383
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQ 346
+ RA ATD SI R RRE+I ER++ LQ LVPN K D ++ML+E + YVKFLQLQ
Sbjct: 195 KSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQ 254
Query: 347 VKVLS 351
+K+LS
Sbjct: 255 IKLLS 259
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P SIAER+RR +I++R+K LQ L P S+K T A MLD ++Y+
Sbjct: 316 GSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYI 375
Query: 341 KFLQLQVKVLS 351
K LQ QV++L+
Sbjct: 376 KDLQEQVQILT 386
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
DP S ++RRE+I+ER+K LQ+LVPN K D +ML++ I YVKFLQLQVKVL+
Sbjct: 171 DPQSAVAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQLQVKVLA 225
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 282 GTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
GT +AR +R +A + H++AER RREKI ERMK LQ+L+P NK+ K SML+++I+Y
Sbjct: 136 GTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEY 195
Query: 340 VKFLQLQV 347
VK L++Q+
Sbjct: 196 VKSLEMQI 203
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 283 TGKARV-RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
GK R+ +R ++++ H+++ER RR++I E+M+ LQELVP NK DKASML+E+I+Y+
Sbjct: 208 AGKGRLMNKKRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYL 267
Query: 341 KFLQLQVKVLSM 352
K LQ+QV+ +SM
Sbjct: 268 KSLQMQVQAMSM 279
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQLQ 346
VRARRGQ D H AER+RREKI+E + LQ+LVP+S++ T KA LDEII+YV+ L+ Q
Sbjct: 21 VRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEIINYVQSLKRQ 80
Query: 347 VKVLSM 352
V++L M
Sbjct: 81 VELLYM 86
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 47/54 (87%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
HS++ER RR+KI ++M+ LQ L+PNS+K DKASMLD+ I+Y+K LQLQ++++SM
Sbjct: 385 HSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQLQLQMMSM 438
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRA+RGQATD HS+AER+RRE+I E+++ LQ+LVP KT A MLD II+YV+ LQ Q
Sbjct: 121 VRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 180
Query: 347 VKV 349
++V
Sbjct: 181 IEV 183
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 46/56 (82%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+ +P S+A R RR+KI+ER++ L++L+P NK D A+MLDE I+YVKFLQLQV++L
Sbjct: 15 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P SIAER RR +I+ R+K LQ+L P ++K T A MLD ++Y+
Sbjct: 350 GSVPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYI 409
Query: 341 KFLQLQVKVLSMSR 354
K LQ QVK+L +R
Sbjct: 410 KDLQKQVKMLRDTR 423
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRARRG AT P SIAER RR +I++R+K LQ+LVPN +K T+ + MLD ++Y+K L+
Sbjct: 150 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELK 209
Query: 345 LQVKVL 350
QV+ L
Sbjct: 210 DQVEKL 215
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYV 340
G+ ++RA+RG AT P SIAER RR +I+ER+K LQ+L P S K T A MLD ++++
Sbjct: 355 GSVPYKIRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHI 414
Query: 341 KFLQLQVKVLS 351
K LQ QV++LS
Sbjct: 415 KDLQQQVQILS 425
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQL 345
+ +A R AT+ S+ R RRE+I ER++ LQ LVPN K D ++ML+E ++YVKFLQL
Sbjct: 208 GKAKADRRSATESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQL 267
Query: 346 QVKVLS 351
Q+K+LS
Sbjct: 268 QIKLLS 273
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
P S A ++RRE+I+ER+K LQ+LVPN K D +ML++ I+YVKFLQLQVKVL+
Sbjct: 209 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 262
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
P S A ++RRE+I+ER+K LQ+LVPN K D +ML++ I+YVKFLQLQVKVL+
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 261
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 355
DP S+A + RRE+I+ER+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 256 DPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 314
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 296 TDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
TDP S+ R RRE+I ER+K LQ L+PN K D ++ML+E + YVKFLQLQ+K+LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 296 TDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
TDP S+ R RRE+I ER+K LQ L+PN K D ++ML+E + YVKFLQLQ+K+LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 296 TDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
TDP S+ R RRE+I ER+K LQ L+PN K D ++ML+E + YVKFLQLQ+K+LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 281 NGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYV 340
N T +RR +A + H+++ER RRE+I E+MK LQEL+P+ NKTDKASMLDE I+Y+
Sbjct: 338 NKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYL 397
Query: 341 KFLQLQVKVLSMSRLGAAGAVLPLITDGQAEASKGLSLS 379
K LQLQ++V+ M G A + P + + + G+ ++
Sbjct: 398 KSLQLQLQVMWMGS-GMAPMMFPGVQHYMSRVAMGMGMA 435
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
P S A ++RRE+I+ER+K LQ+LVPN K D +ML++ I+YVKFLQLQVKVL+
Sbjct: 202 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 255
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 298 PHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
P S A ++RRE+I+ER+K LQ+LVPN K D +ML++ I+YVKFLQLQVKVL+
Sbjct: 224 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 277
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
++DP ++A RLRRE+++ER++ LQ LVP ++ D ASMLDE Y+KFL+ QVK L
Sbjct: 291 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKAL 346
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
Query: 282 GTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVK 341
GTG +R + H++ ER RR+KI +RM+ L+EL+PN NKTDKASMLD+ I+Y+K
Sbjct: 744 GTG-----VKRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLK 798
Query: 342 FLQLQVKV 349
L+LQ++V
Sbjct: 799 TLKLQIQV 806
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 296 TDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+DP ++A RLRRE+++ER++ LQ+LVP +K D ASMLDE Y+KFL+ QV+ L
Sbjct: 294 SDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 348
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP SIA RLRRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 296 TDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+DP ++A RLRRE+++ER++ LQ+LVP +K D ASMLDE Y+KFL+ QV+ L
Sbjct: 293 SDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 347
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+MK LQ+L+P+S+KTDKASML+E I+Y+K LQLQ+++
Sbjct: 197 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQL 256
Query: 350 LSMSRLGAAGAVLPLITDGQAEASKGLSLSP 380
+ M G A + P I ++ G++ P
Sbjct: 257 MWMGS-GMAPIMFPGIQHYMSQMGMGMATPP 286
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 6/90 (6%)
Query: 263 VGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVP 322
+GL S A N + +G+ RR +A + H+++ER RR++I ERMK LQEL+P
Sbjct: 229 IGLTSTDDQAMGNKSSQRSGS------TRRSRAAEVHNLSERRRRDRINERMKALQELIP 282
Query: 323 NSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
+ +KTDKAS+LDE IDY+K LQ+Q++V+ M
Sbjct: 283 HCSKTDKASILDEAIDYLKSLQMQLQVMWM 312
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
++DP ++A RLRRE+++ER++ LQ LVP ++ D ASMLDE Y+KFL+ QVK L
Sbjct: 286 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 341
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
++DP ++A RLRRE+++ER++ LQ LVP ++ D ASMLDE Y+KFL+ QVK L
Sbjct: 287 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 342
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 356
DP S+A R RRE+I+ER+K LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 139 DPQSVAARHRRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQ---- 194
Query: 357 AAGAVLPL 364
AGA PL
Sbjct: 195 -AGASRPL 201
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
+P SI R RRE+I ER+K LQ LVPN K D ++ML+E + YVKFLQLQ+++LS
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLS 276
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 265 LPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 324
LPSL ++ +PT + + K R R ++DP ++A RLRREK++ER++ LQ LVP
Sbjct: 272 LPSLTGASAGDPTHEPSPS-KPRRRKNVRISSDPQTVAARLRREKVSERLRALQRLVPGG 330
Query: 325 NKTDKASMLDEIIDYVKFLQLQ 346
+K D ASMLDE Y+KFL+ Q
Sbjct: 331 SKMDTASMLDEAASYLKFLKSQ 352
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
RVRA+RG AT P SIAER RR +I++R+K LQ+LVPN +K T+ + MLD +DY+K L+
Sbjct: 279 CRVRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELK 338
Query: 345 LQVKVL 350
+V+ L
Sbjct: 339 DRVEKL 344
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
++DP ++A RLRRE++++R++ LQ+LVP NK D ASMLDE Y+KFL+ QV+ L
Sbjct: 283 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 338
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 296 TDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+DP ++A RLRRE++++R++ LQ+LVP NK D ASMLDE Y+KFL+ QV+ L
Sbjct: 283 SDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKL 337
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQV- 347
R +R + + H+++E+ RREKI ++M+ L++L+PN NK DKASMLD+ IDY+K L+LQ+
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQLQ 390
Query: 348 ---KVLSM 352
+++SM
Sbjct: 391 ANFQIMSM 398
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
RVRA+RG AT P SIAER RR +I+E+++ LQ LVPN +K T + MLD +D++K LQ
Sbjct: 284 RVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQS 343
Query: 346 QVKVL 350
Q++ L
Sbjct: 344 QLQTL 348
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 299 HSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAA 358
H ++ + RR++I E++K LQEL+PN KTDK SMLDE IDY+K LQLQ+++L M + G A
Sbjct: 144 HLVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK-GMA 202
Query: 359 GAVLP 363
V P
Sbjct: 203 PVVPP 207
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
Query: 284 GKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-------DKASMLDEI 336
G+ +++ ++T+ H+++ER RR++I ERM+ LQEL+PN NK DKASMLDE
Sbjct: 419 GRGVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEA 478
Query: 337 IDYVKFLQLQVKVLSMSRLGAAGAVLPL 364
I+Y+K LQLQ++++SM G G +P+
Sbjct: 479 IEYLKSLQLQLQIMSM---GGGGLYMPM 503
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 44/56 (78%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
++DP ++A RLRRE++++R++ LQ+LVP +K D ASMLDE Y+KFL+ QV+ L
Sbjct: 285 SSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQAL 340
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 306 RREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLI 365
RR++I E+M+ LQEL+PN NK DKASMLDE I+Y+K LQLQV+++SM G+ + P++
Sbjct: 12 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM---GSGLCIPPML 68
Query: 366 TDGQAEASKGLSLSPQA 382
A + L + P A
Sbjct: 69 LP---PAMQHLQIPPAA 82
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+ERM+ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 166 DPQSVAARHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 219
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
RVRA+RG AT P SIAER RR +I+E+++ LQ LVPN +K T + MLD +D++K LQ
Sbjct: 133 RVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQS 192
Query: 346 QVKVL 350
Q++ L
Sbjct: 193 QLQTL 197
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 263 VGLPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVP 322
V L S++ A N + +G+ RR +A + H+++ER RR++I ERMK LQEL+P
Sbjct: 235 VRLMSMEDQAIGNKSSQRSGS------TRRSRAAEVHNLSERRRRDRINERMKALQELIP 288
Query: 323 NSNKTDKASMLDEIIDYVKFLQLQVKVLSM 352
+ +KTDKAS+LDE IDY+K LQ+Q++V+ M
Sbjct: 289 HCSKTDKASILDEAIDYLKSLQMQLQVMWM 318
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 293 GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
G ATDP S+ R RREKI ER+K LQ LVPN + D +ML+E I +VKFL+ Q+++L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELL 58
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 288 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQ 346
VRAR GQATD ++AER+RR KI E+++ LQ +VP KT A MLDEII+YV+ LQ Q
Sbjct: 153 VRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQ 212
Query: 347 VKVLSM 352
V+ LS+
Sbjct: 213 VEFLSL 218
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQV 347
R R G ATDP SIA R RREK +R++ LQ LVPN + D ML + +YV+FLQ +V
Sbjct: 676 RRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYVRFLQHKV 734
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
++ + +R +A H+ +ER RR++I ++M+ LQ+LVPNS+KTDKASMLDE+I+++K LQ
Sbjct: 251 RSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQ 310
Query: 345 LQVK 348
QV+
Sbjct: 311 AQVQ 314
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
R RA+RG AT P SIAER RR +I++R+K LQ+LVPN +K T+ + MLD + Y+K LQ
Sbjct: 91 CRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQ 150
Query: 345 LQVKVL 350
QV+ L
Sbjct: 151 GQVEKL 156
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
R RA+RG AT P SIAER RR +I++R+K LQ+LVPN +K T+ + MLD + Y+K LQ
Sbjct: 307 CRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQ 366
Query: 345 LQVKVL 350
QV+ L
Sbjct: 367 GQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
R RA+RG AT P SIAER RR +I++R+K LQ+LVPN +K T+ + MLD + Y+K LQ
Sbjct: 307 CRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQ 366
Query: 345 LQVKVL 350
QV+ L
Sbjct: 367 GQVEKL 372
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQ 344
VRARRGQATD HS+AER+RR KI E++K LQ +VP KT A MLDEII+Y FL
Sbjct: 153 VHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINY--FLS 210
Query: 345 LQVKVLS 351
L++ S
Sbjct: 211 LKLTAAS 217
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
++ + +R +A H+ +ER RR++I ++M+ LQ+LVPNS+KTDKASMLDE+I+++K LQ
Sbjct: 251 RSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQ 310
Query: 345 LQVK 348
QV+
Sbjct: 311 AQVQ 314
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 55/110 (50%), Gaps = 45/110 (40%)
Query: 288 VRARRGQATDPHSIAERL------------------------------------------ 305
VRARRGQATD HS+AER+
Sbjct: 157 VRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSVYI 216
Query: 306 --RREKIAERMKNLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLSM 352
RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 217 NARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 266
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
++ + +R +A H+ +ER RR++I ++M+ LQ+LVPNS+KTDKASMLDE+ID++K LQ
Sbjct: 253 RSAISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQ 312
Query: 345 LQVK 348
V+
Sbjct: 313 ATVQ 316
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 285 KARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQ 344
++ + +R +A H+ +ER RR++I ++M+ LQ+LVPNS+KTDKASMLDE+ID++K LQ
Sbjct: 253 RSAISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQ 312
Query: 345 LQVK 348
V+
Sbjct: 313 ATVQ 316
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
R RA+RG AT P SIAER RR +I+ ++K LQELVPN +K T A MLD ++++K LQ
Sbjct: 232 RARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQH 291
Query: 346 QVKV 349
QV+V
Sbjct: 292 QVEV 295
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 44/56 (78%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
++DP ++A RLRRE++++R++ LQ+LVP +K D ASMLDE Y+KFL+ QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 337
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
R RA+RG AT P SIAER RR +I+ ++K LQELVPN +K T A MLD ++++K LQ
Sbjct: 230 RARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQH 289
Query: 346 QVKV 349
QV+V
Sbjct: 290 QVEV 293
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 306 RREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 351
RR+KI +RMK LQ+LVPNS+KTDKASMLDE+I+Y+K LQ QV ++S
Sbjct: 155 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 200
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 277 TGGCNG----TGKARVRARRGQ--ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKA 330
T GCNG T +A RR ++DP ++A R RRE+I+ER++ LQ LVP K D A
Sbjct: 315 TLGCNGGDEDTERAPAPGRRNVRISSDPQTVAARQRRERISERLRVLQRLVPGGAKMDTA 374
Query: 331 SMLDEIIDYVKFLQLQVKVL 350
SMLDE Y++FL+ Q++ L
Sbjct: 375 SMLDEAASYLRFLKAQIRDL 394
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
+VRA+RG AT P SIAER RR +I+E+++ LQELVPN +K T A MLD ++++K LQ
Sbjct: 140 KVRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQS 199
Query: 346 QVKVL 350
Q++ L
Sbjct: 200 QLQAL 204
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 354
+ DP S+A R RRE+I++R++ LQ LVP K D ASMLDE I YVKFL+LQ++V
Sbjct: 3 SKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQVCDTCN 62
Query: 355 L 355
L
Sbjct: 63 L 63
>gi|255559498|ref|XP_002520769.1| DNA binding protein, putative [Ricinus communis]
gi|223540154|gb|EEF41731.1| DNA binding protein, putative [Ricinus communis]
Length = 340
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 13/116 (11%)
Query: 314 MKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGAAGAVLPLITDGQAEAS 373
+K LQEL+P+S + + ++DEIIDYVK+LQLQ+K LS SRL + G A
Sbjct: 231 LKALQELLPHSVEGSQIVVMDEIIDYVKYLQLQMKELSRSRLEGH------LCSGPAHFL 284
Query: 374 KGLSLSPQADQGVDISLNSDQIAFEEEVVKLMESNVTKAMQYLQNKGLCLMPIALA 429
+G Q ++ L EE + KL++ N + A ++L++KGL +MP+ALA
Sbjct: 285 EGYHPYILHQQTMNEPL-------EETMAKLLKVNSSAATKFLESKGLFVMPMALA 333
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKRQIRLL 187
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 146 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 199
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 281 NGTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIID 338
+GT +AR +R + + H++AER RREKI E+MK LQ+L+P NK+ K S LD+ I+
Sbjct: 240 HGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIE 299
Query: 339 YVKFLQLQVKVLSMSRLGAAG 359
YVK LQ Q++ + MS + AG
Sbjct: 300 YVKSLQSQIQGM-MSPMMNAG 319
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 290 ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 349
ARR +A + H+++ER RR++I E+MK LQ+L+P+S+KTDKASML+E I+Y+K LQLQ+++
Sbjct: 64 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQL 123
Query: 350 LSMSRLGAAGAVLPLITDGQAEASKGLS 377
+ M G A + P I ++ G++
Sbjct: 124 MWMGS-GMAPIMFPGIQHYMSQMGMGMA 150
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 11/84 (13%)
Query: 265 LPSLQQTASANPTGGCNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 324
+P+L++ AS+ P + VR + DP S+A R RRE+I++R++ LQ LVP
Sbjct: 14 IPTLEEIASSRPK-------RRNVRISK----DPQSVAARHRRERISDRIRVLQRLVPGG 62
Query: 325 NKTDKASMLDEIIDYVKFLQLQVK 348
K D ASMLDE I YVKFL+LQ++
Sbjct: 63 TKMDTASMLDEAIHYVKFLKLQLQ 86
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
R RA+RG AT P SIAER RR +I++R+K LQ+LVPN +K T+ + MLD + Y+K LQ
Sbjct: 154 CRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQ 213
Query: 345 LQVKVL 350
QV+ L
Sbjct: 214 GQVEKL 219
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 44/56 (78%)
Query: 295 ATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
+TDP ++A R RRE+I+E+++ LQ+LVP +K D ASMLDE +Y+KFL+ QVK L
Sbjct: 339 STDPQTVAARHRRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 394
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+K+L
Sbjct: 123 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIKLL 176
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 51/60 (85%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ +KTDKAS+LDE IDY+K LQLQ++V+
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Query: 286 ARVR---ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
AR R +R ++T+ H + ER RR++ ++M+ LQ+L+PN K DKAS+LDE I Y++
Sbjct: 218 ARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRT 277
Query: 343 LQLQVKVLSM 352
LQLQV+++SM
Sbjct: 278 LQLQVQMMSM 287
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 51/60 (85%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ +KTDKAS+LDE IDY+K LQLQ++V+
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 51/60 (85%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ +KTDKAS+LDE IDY+K LQLQ++V+
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 292
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Query: 286 ARVR---ARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKF 342
AR R +R ++T+ H + ER RR++ ++M+ LQ+L+PN K DKAS+LDE I Y++
Sbjct: 218 ARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRT 277
Query: 343 LQLQVKVLSM 352
LQLQV+++SM
Sbjct: 278 LQLQVQMMSM 287
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 51/60 (85%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ +KTDKAS+LDE IDY+K LQLQ++V+
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 356
DP SIA R RRE+I+E+++ LQ +VP K D ASMLDE I YVKFL+ Q+K L G
Sbjct: 180 DPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSLQERASG 239
Query: 357 A 357
A
Sbjct: 240 A 240
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ ++TDKAS+LDE IDY+K LQ+Q++V+
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
Query: 351 SM 352
M
Sbjct: 313 WM 314
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 281 NGTGKAR--VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIID 338
GT +AR ++R +A H ++ER RR+KI E MK LQEL+P KTD++SMLD++I+
Sbjct: 262 QGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIE 321
Query: 339 YVKFLQLQVK 348
YVK LQ Q++
Sbjct: 322 YVKSLQSQIQ 331
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ ++TDKAS+LDE IDY+K LQ+Q++V+
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
Query: 351 SM 352
M
Sbjct: 313 WM 314
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 356
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L +
Sbjct: 107 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQIRLLQSNTNS 166
Query: 357 AAGAVL----PLITDGQAEASKGLSLSPQ---ADQGVDISLN 391
+ P I D Q S SL PQ AD G N
Sbjct: 167 NSNNNNNQDPPCIGDWQPLGSNS-SLEPQAAVADHGFTFRSN 207
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 52/62 (83%)
Query: 291 RRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
RR +A + H+++ER RR++I ERMK LQEL+P+ ++TDKAS+LDE IDY+K LQ+Q++V+
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
Query: 351 SM 352
M
Sbjct: 313 WM 314
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 287 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQL 345
++RA+RG AT P SIAER RR +I+ ++K LQELVPN +K T + MLD + ++K LQ
Sbjct: 291 KIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQN 350
Query: 346 QVKVL 350
Q++VL
Sbjct: 351 QIQVL 355
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
++RA+RG AT P SIAER+RR +I+ERM+ LQEL P+ +K T A LD I+ +K LQ
Sbjct: 334 CKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQ 393
Query: 345 LQVKVLS 351
QVK L+
Sbjct: 394 KQVKSLA 400
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 280 CNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
C G K + R R ++DP ++A R RRE+I+ +++ LQ LVP K D ASMLDE I Y
Sbjct: 276 CLGGSKPKRRNVR-ISSDPQTVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHY 334
Query: 340 VKFLQLQVKVLSM 352
VK+L+ QV+ + M
Sbjct: 335 VKYLKSQVQAMEM 347
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 186
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQV 347
R R G ATDP SIA R RREK +R++ LQ LVPN + D ML + +YV+FLQ +V
Sbjct: 675 RRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEYVRFLQHKV 733
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 286 ARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIDYVKFLQ 344
R RA+RG AT P SIAER RR +I+ ++K LQELVPN +K T A MLD ++++K LQ
Sbjct: 229 CRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQ 288
Query: 345 LQVKVL 350
QV+ L
Sbjct: 289 HQVESL 294
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 280 CNGTGKARVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDY 339
C G K + R R ++DP ++A R RRE+I+ +++ LQ LVP K D ASMLDE I Y
Sbjct: 277 CLGGSKPKRRNVR-ISSDPQTVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHY 335
Query: 340 VKFLQLQVKVLSM 352
VK+L+ QV+ + M
Sbjct: 336 VKYLKSQVQAMEM 348
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 138 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 191
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ QV+ L
Sbjct: 154 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 207
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 289 RARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVK 348
R + + D S+ + RRE+I ER++ LQ+LVPN K D ++ML+E + YVKFLQLQ+K
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 227
Query: 349 VLS 351
+LS
Sbjct: 228 LLS 230
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 356
DP S+A R RRE+I++R++ LQ VP K D ASMLDE I YVKFLQ Q++ L R+G
Sbjct: 391 DPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQLQTL--ERIG 448
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A RLRRE+I+E+++ LQ LVP K D ASML+E I YVKFL+ Q+++L
Sbjct: 113 DPQSVAARLRRERISEKIRILQRLVPGGRKMDTASMLEEAIRYVKFLKRQIRLL 166
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 297 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVL 350
DP S+A R RRE+I+E+++ LQ LVP K D ASMLDE I YVKFL+ Q+++L
Sbjct: 102 DPASVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 155
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.127 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,017,093,003
Number of Sequences: 23463169
Number of extensions: 343581699
Number of successful extensions: 878836
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2857
Number of HSP's successfully gapped in prelim test: 871
Number of HSP's that attempted gapping in prelim test: 874324
Number of HSP's gapped (non-prelim): 4362
length of query: 519
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 372
effective length of database: 8,910,109,524
effective search space: 3314560742928
effective search space used: 3314560742928
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)