Your job contains 1 sequence.
>010050
MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL
TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH
QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ
VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV
FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK
EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA
SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED
ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG
AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010050
(519 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081036 - symbol:MEE32 "MATERNAL EFFECT EMBRYO... 1274 7.3e-130 1
TIGR_CMR|CHY_0623 - symbol:CHY_0623 "shikimate 5-dehydrog... 340 9.1e-31 1
TIGR_CMR|BA_4561 - symbol:BA_4561 "shikimate 5-dehydrogen... 329 1.8e-29 1
TIGR_CMR|DET_0465 - symbol:DET_0465 "shikimate 5-dehydrog... 295 1.3e-25 1
TIGR_CMR|SPO_3891 - symbol:SPO_3891 "shikimate 5-dehydrog... 280 5.9e-24 1
CGD|CAL0004346 - symbol:ARO1 species:5476 "Candida albica... 265 2.7e-23 2
POMBASE|SPAC1834.02 - symbol:aro1 "pentafunctional aromat... 277 9.2e-23 2
UNIPROTKB|P0A6D5 - symbol:ydiB "YdiB" species:83333 "Esch... 242 8.8e-20 1
TIGR_CMR|GSU_1490 - symbol:GSU_1490 "shikimate 5-dehydrog... 242 8.8e-20 1
ASPGD|ASPL0000055969 - symbol:aromA species:162425 "Emeri... 260 1.2e-18 1
TIGR_CMR|CBU_2075 - symbol:CBU_2075 "3-dehydroquinate deh... 226 4.9e-18 1
UNIPROTKB|Q48JV1 - symbol:aroE "Shikimate dehydrogenase" ... 216 6.1e-17 1
SGD|S000002534 - symbol:ARO1 "Pentafunctional arom protei... 222 5.1e-15 2
ASPGD|ASPL0000057652 - symbol:qutR species:162425 "Emeric... 161 4.3e-13 2
TIGR_CMR|SPO_2425 - symbol:SPO_2425 "shikimate 5-dehydrog... 133 5.2e-13 2
TIGR_CMR|DET_0466 - symbol:DET_0466 "3-dehydroquinate deh... 174 2.2e-12 1
UNIPROTKB|P95001 - symbol:aroE "Shikimate 5-dehydrogenase... 111 8.9e-11 2
TIGR_CMR|CPS_0030 - symbol:CPS_0030 "shikimate 5-dehydrog... 158 7.0e-09 1
ASPGD|ASPL0000061936 - symbol:qutB species:162425 "Emeric... 156 2.2e-08 1
UNIPROTKB|P05194 - symbol:aroD "AroD" species:83333 "Esch... 146 1.2e-07 1
UNIPROTKB|P15770 - symbol:aroE "shikimate dehydrogenase" ... 147 1.3e-07 1
UNIPROTKB|Q9KVT3 - symbol:aroE "Shikimate dehydrogenase" ... 147 1.4e-07 1
TIGR_CMR|VC_0056 - symbol:VC_0056 "conserved hypothetical... 147 1.4e-07 1
ASPGD|ASPL0000046734 - symbol:AN8886 species:162425 "Emer... 125 4.9e-07 2
TIGR_CMR|SO_0040 - symbol:SO_0040 "shikimate 5-dehydrogen... 141 7.5e-07 1
TIGR_CMR|CJE_0454 - symbol:CJE_0454 "shikimate 5-dehydrog... 128 1.8e-05 1
>TAIR|locus:2081036 [details] [associations]
symbol:MEE32 "MATERNAL EFFECT EMBRYO ARREST 32"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003855 "3-dehydroquinate dehydratase activity"
evidence=IEA;IDA] [GO:0004764 "shikimate 3-dehydrogenase (NADP+)
activity" evidence=IEA;IDA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IMP;NAS] [GO:0050661 "NADP binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0019632 "shikimate metabolic process"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] InterPro:IPR001381 InterPro:IPR011342
InterPro:IPR013708 InterPro:IPR013785 InterPro:IPR022893
Pfam:PF01487 Pfam:PF08501 PROSITE:PS01028 UniPathway:UPA00053
InterPro:IPR016040 InterPro:IPR006151 Pfam:PF01488 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.20.20.70
Gene3D:3.40.50.720 GO:GO:0003855 GO:GO:0050661 GO:GO:0009793
EMBL:AC011623 eggNOG:COG0169 GO:GO:0004764 GO:GO:0009073
GO:GO:0009423 TIGRFAMs:TIGR01093 HOGENOM:HOG000237875 GO:GO:0019632
TIGRFAMs:TIGR00507 EMBL:BT012197 EMBL:AY736474 EMBL:AK220988
IPI:IPI00541842 RefSeq:NP_187286.1 UniGene:At.43031 PDB:2GPT
PDB:2O7Q PDB:2O7S PDBsum:2GPT PDBsum:2O7Q PDBsum:2O7S
ProteinModelPortal:Q9SQT8 SMR:Q9SQT8 STRING:Q9SQT8 PaxDb:Q9SQT8
PRIDE:Q9SQT8 EnsemblPlants:AT3G06350.1 GeneID:819809
KEGG:ath:AT3G06350 TAIR:At3g06350 InParanoid:Q9SQT8 KO:K13832
OMA:ISHLSHN PhylomeDB:Q9SQT8 ProtClustDB:PLN02520
BioCyc:ARA:AT3G06350-MONOMER BioCyc:MetaCyc:AT3G06350-MONOMER
BRENDA:4.2.1.10 EvolutionaryTrace:Q9SQT8 Genevestigator:Q9SQT8
GermOnline:AT3G06350 Uniprot:Q9SQT8
Length = 603
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 256/522 (49%), Positives = 346/522 (66%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
+G +I KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+
Sbjct: 84 IGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTII 143
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
K PLP L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + K
Sbjct: 144 KKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFI-KSIDGK 202
Query: 121 QSGT-RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC 179
+ G + IVS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S
Sbjct: 203 KPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKA 262
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINAD 237
QVP I +GERGL+S++L KF G L +G+L + V G PT++ L Y I D
Sbjct: 263 QVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPD 322
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
TKV+G+I KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS
Sbjct: 323 TKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTI 382
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+KEA ++ CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G +
Sbjct: 383 PHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPS 442
Query: 358 GTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDVMGAARP 417
S SPLA + V+ K +GA+VVI + +ERA LA + G A
Sbjct: 443 SVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALS 502
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
D+ N+ PE G +LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE
Sbjct: 503 LTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAE 562
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+GAI VSG EMF+RQA QF +FTG APKE +I ++K+
Sbjct: 563 ESGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQI-MSKY 603
>TIGR_CMR|CHY_0623 [details] [associations]
symbol:CHY_0623 "shikimate 5-dehydrogenase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0050661 eggNOG:COG0169
GO:GO:0004764 GO:GO:0009073 GO:GO:0009423 HSSP:Q9SQT8
RefSeq:YP_359479.1 ProteinModelPortal:Q3AEF5 STRING:Q3AEF5
GeneID:3728671 KEGG:chy:CHY_0623 PATRIC:21274383
HOGENOM:HOG000237875 KO:K00014 OMA:NIESAYK
BioCyc:CHYD246194:GJCN-623-MONOMER GO:GO:0019632 TIGRFAMs:TIGR00507
Uniprot:Q3AEF5
Length = 280
Score = 340 (124.7 bits), Expect = 9.1e-31, P = 9.1e-31
Identities = 89/290 (30%), Positives = 146/290 (50%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN +TK+ G+I P+ H+ P +HN F+ +N N +Y+P+ V + L + + +F
Sbjct: 3 INGETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNFR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKE V F DEV A+ I AVNTI+ G+LIGYNTD + ++ K
Sbjct: 63 GINVTIPYKEKVFPFLDEVATEAKTIGAVNTIVH--DRGRLIGYNTDAPGFLLSL----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDV 411
E + + G+ +L + GA ++I + ++AK LA D
Sbjct: 117 ENDVE---------VTGKKVLLLGAGGAARAVAYALLTAGAELIIANRTIDKAKELAKDF 167
Query: 412 MGAARPFEDI-LNFQPEKGA---ILANATPLGMHPNTDRVPVSEET--LRDYQLVFDAVY 465
G + E + L +P A + N PLGMHP +++P + T D+ + +D +Y
Sbjct: 168 QGVGKISEILELGDKPISLAPYHMAVNTLPLGMHPYENQMPAVDFTGVTSDF-VAYDLIY 226
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
P +T+ LK ++ GA ++G+ M L Q + F +TG P + M++ +
Sbjct: 227 NPAETKFLKASKEKGARTINGLSMLLWQGVLAFEKWTGVSPPVKVMKKAI 276
>TIGR_CMR|BA_4561 [details] [associations]
symbol:BA_4561 "shikimate 5-dehydrogenase" species:198094
"Bacillus anthracis str. Ames" [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0050661 GO:GO:0004764 GO:GO:0009073 GO:GO:0009423
HOGENOM:HOG000237875 KO:K00014 GO:GO:0019632 TIGRFAMs:TIGR00507
ProtClustDB:PRK00258 RefSeq:NP_846783.1 RefSeq:YP_021206.1
HSSP:Q58484 ProteinModelPortal:Q81LQ1 SMR:Q81LQ1 DNASU:1088306
EnsemblBacteria:EBBACT00000011914 EnsemblBacteria:EBBACT00000017988
GeneID:1088306 GeneID:2818978 KEGG:ban:BA_4561 KEGG:bar:GBAA_4561
PATRIC:18786706 OMA:AFKIWTG BioCyc:BANT261594:GJ7F-4436-MONOMER
Uniprot:Q81LQ1
Length = 308
Score = 329 (120.9 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 81/284 (28%), Positives = 140/284 (49%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 416 RPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
+ E+G I+ T +GMHP + P+ +L+ +V D +Y P +T++
Sbjct: 169 HSVALSLEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
L +A+ GAII +G++MF+ Q F ++TG E M+++V+
Sbjct: 229 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVI 272
>TIGR_CMR|DET_0465 [details] [associations]
symbol:DET_0465 "shikimate 5-dehydrogenase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 GO:GO:0050661
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0169
GO:GO:0004764 GO:GO:0009073 GO:GO:0009423 HSSP:Q9SQT8
HOGENOM:HOG000237875 KO:K00014 GO:GO:0019632 TIGRFAMs:TIGR00507
RefSeq:YP_181209.1 ProteinModelPortal:Q3Z990 STRING:Q3Z990
GeneID:3230170 KEGG:det:DET0465 PATRIC:21607999 OMA:TAIEIQA
ProtClustDB:PRK00258 BioCyc:DETH243164:GJNF-465-MONOMER
Uniprot:Q3Z990
Length = 286
Score = 295 (108.9 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 88/288 (30%), Positives = 137/288 (47%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FGLI PV HS P + N F+H + +Y+ + ++L+ ++ + G +V
Sbjct: 8 LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDSLDPAAEKIGAVNTIVNE--NGRLKGYNTDFGGFVRLLEH--------N 117
Query: 358 GTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDVM----G 413
A P A + F L + G + + E+AK LA + G
Sbjct: 118 RIA----P-AKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLAGKMCLRLSG 172
Query: 414 AARPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ E + N + ++ N TP+GM + V LR V DA+Y P KT
Sbjct: 173 KTQGLELNDTNLEEALADTDVIVNCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIYNPCKT 232
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 517
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E LA
Sbjct: 233 RLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMKEAELA 280
>TIGR_CMR|SPO_3891 [details] [associations]
symbol:SPO_3891 "shikimate 5-dehydrogenase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004764 "shikimate 3-dehydrogenase
(NADP+) activity" evidence=ISS] [GO:0009423 "chorismate
biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050661 GO:GO:0004764 GO:GO:0009073
GO:GO:0009423 HOGENOM:HOG000237875 KO:K00014 GO:GO:0019632
TIGRFAMs:TIGR00507 ProtClustDB:PRK00258 RefSeq:YP_169079.1
ProteinModelPortal:Q5LLN1 GeneID:3196139 KEGG:sil:SPO3891
PATRIC:23381289 OMA:APRISIV Uniprot:Q5LLN1
Length = 277
Score = 280 (103.6 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 89/270 (32%), Positives = 125/270 (46%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPY 299
G+I P+ HSK P LH + NG Y+PM V DL + T F G ++ P+
Sbjct: 10 GVIGHPISHSKSPRLHGHWLKTYGINGHYIPMDVAPQDLAQVVRTLPKAGFVGVNITIPH 69
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEAVM D++ A I AVNT+I R DG+++ NTD + + K+G
Sbjct: 70 KEAVMSVADQITDRATLIGAVNTLIFR-EDGRILADNTDGYGFMENLRAGAPGWDPKSGP 128
Query: 360 AS-FGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
A FG+ A R + ++R + D DF + ++A D + A
Sbjct: 129 AVVFGAGGAARAVISALAEAGVPEVIVTNRTRVRADKLKD-DFGQRVTVA-DWVQAGNVI 186
Query: 419 EDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
ED ++ N T LGM + RVP+ + LR +V D VY P KTRLL +AE
Sbjct: 187 ED--------ARLVVNTTSLGMIGKPELRVPL--DGLRADAVVTDLVYAPLKTRLLAEAE 236
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
G V G+ M L QA+ F + G E P
Sbjct: 237 EMGCTTVDGLGMLLHQAVPGFERWFG-ERP 265
>CGD|CAL0004346 [details] [associations]
symbol:ARO1 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0003866 "3-phosphoshikimate
1-carboxyvinyltransferase activity" evidence=IEA] [GO:0003855
"3-dehydroquinate dehydratase activity" evidence=IEA] [GO:0004765
"shikimate kinase activity" evidence=IEA] [GO:0003856
"3-dehydroquinate synthase activity" evidence=IEA] [GO:0004764
"shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA]
InterPro:IPR001381 InterPro:IPR001986 InterPro:IPR006264
InterPro:IPR008289 InterPro:IPR010110 InterPro:IPR013708
InterPro:IPR013785 InterPro:IPR013792 InterPro:IPR016037
Pfam:PF00275 Pfam:PF01487 Pfam:PF08501 PIRSF:PIRSF000514
PROSITE:PS01028 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 InterPro:IPR000623 CGD:CAL0004346 Pfam:PF01202
Pfam:PF01488 GO:GO:0005524 GO:GO:0005737 Gene3D:3.20.20.70
Gene3D:3.40.50.720 GO:GO:0003855 GO:GO:0046872 EMBL:AACQ01000005
EMBL:AACQ01000006 RefSeq:XP_722769.1 RefSeq:XP_722916.1
ProteinModelPortal:Q5AME2 SMR:Q5AME2 STRING:Q5AME2 GeneID:3635538
GeneID:3635680 KEGG:cal:CaO19.12175 KEGG:cal:CaO19.4704
CGD:CAL0069662 eggNOG:COG0169 KO:K13830 GO:GO:0003856 GO:GO:0003866
GO:GO:0004764 GO:GO:0004765 GO:GO:0009073 GO:GO:0009423
Gene3D:3.65.10.10 HAMAP:MF_03143 InterPro:IPR023193
PANTHER:PTHR21090:SF1 PRINTS:PR01100 SUPFAM:SSF55205
TIGRFAMs:TIGR01356 TIGRFAMs:TIGR01357 TIGRFAMs:TIGR01093
TIGRFAMs:TIGR01809 PROSITE:PS00104 PROSITE:PS00885 PROSITE:PS01128
Uniprot:Q5AME2
Length = 1551
Score = 265 (98.3 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 103/369 (27%), Positives = 175/369 (47%)
Query: 3 VVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEII 59
VV + ++ ++ L + + +V+ ++ ++ GAD VE+R+D + + +I
Sbjct: 1038 VVPVGRSAAVV---LTSPDLNEVVRDL-ESITIGADAVELRVDLFKDTSAEFVAAQIAVI 1093
Query: 60 LTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAE-DLGADYVDFELKVASNILGKQYS 118
LP++ R GG + + L++L L LG YVD +L A N L ++ S
Sbjct: 1094 RKHADLPIIYTVRTMSQGGKFPDENVDELKSLLLLGIRLGVAYVDLQL-TAPNELIEEIS 1152
Query: 119 SHQSGTRFIVSC-NLDCETP-SEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL 176
S + TR I + +++ E + + ++ + ADI++LV N I + +
Sbjct: 1153 SKKGFTRVIGTYQDINGELKWNNVEWKNKYNQGVSMNADIVRLVGKANSIQDNLDLENFK 1212
Query: 177 SHCQV-PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPV-LGLPTVESLRQTYKVEHI 234
+ P+IA+++G +G +SQ+L NG S K P T+ L QTY I
Sbjct: 1213 KQNTLKPLIAFNLGSQGKLSQVL----NGTFTPISHKLLPNDEEFLTIGELNQTYF--DI 1266
Query: 235 NADT-KVFGLISKPVGHSKGPILHNPTFRHVN--YN-GIYVPMFVDDLKKFFSTYSSPDF 290
T K F +I P+ HS+ P LHN ++ +N Y G + VD + + + + PDF
Sbjct: 1267 GGFTAKKFWVIGSPIEHSRSPNLHNAGYKALNLPYQFGRFEATDVDVV--YDNLINKPDF 1324
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEA-SITAIEDA 349
G ++ P K +MKF ++ A+ I AVNT+I P +G G NTD S + I
Sbjct: 1325 GGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI--PIEGGYFGDNTDWVGISNSFIRAG 1382
Query: 350 IKERGYKNG 358
+ + NG
Sbjct: 1383 VPPKSSSNG 1391
Score = 88 (36.0 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 450 SEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPK 508
SE++ + +A Y PR T ++K AE ++ GVEM + Q QF L TG AP
Sbjct: 1482 SEQSAGFKPTLLEASYKPRVTPIMKLAEEQYKWKVIPGVEMLVNQGDRQFKLHTGFTAPY 1541
Query: 509 EFMREIVL 516
E + V+
Sbjct: 1542 EIIHRAVV 1549
>POMBASE|SPAC1834.02 [details] [associations]
symbol:aro1 "pentafunctional aromatic polypeptide Aro1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003855
"3-dehydroquinate dehydratase activity" evidence=IEA] [GO:0003856
"3-dehydroquinate synthase activity" evidence=IEA] [GO:0003866
"3-phosphoshikimate 1-carboxyvinyltransferase activity"
evidence=IEA] [GO:0004764 "shikimate 3-dehydrogenase (NADP+)
activity" evidence=IEA] [GO:0004765 "shikimate kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=IEA] [GO:0009423 "chorismate
biosynthetic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001381 InterPro:IPR001986
InterPro:IPR006264 InterPro:IPR008289 InterPro:IPR010110
InterPro:IPR013708 InterPro:IPR013785 InterPro:IPR013792
InterPro:IPR016037 Pfam:PF00275 Pfam:PF01487 Pfam:PF08501
PIRSF:PIRSF000514 PROSITE:PS01028 UniPathway:UPA00053
InterPro:IPR016040 InterPro:IPR006151 InterPro:IPR000623
PomBase:SPAC1834.02 Pfam:PF01202 Pfam:PF01488 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0003855 GO:GO:0046872
GO:GO:0016491 GO:GO:0006568 GO:GO:0006570 eggNOG:COG0169 KO:K13830
GO:GO:0003856 GO:GO:0003866 GO:GO:0004764 GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 Gene3D:3.65.10.10 HAMAP:MF_03143
InterPro:IPR023193 PANTHER:PTHR21090:SF1 PRINTS:PR01100
SUPFAM:SSF55205 TIGRFAMs:TIGR01356 TIGRFAMs:TIGR01357
TIGRFAMs:TIGR01093 TIGRFAMs:TIGR01809 PROSITE:PS00104
PROSITE:PS00885 PROSITE:PS01128 OrthoDB:EOG4PRWZT PIR:T50113
RefSeq:NP_594681.1 ProteinModelPortal:Q9P7R0 SMR:Q9P7R0
STRING:Q9P7R0 PRIDE:Q9P7R0 EnsemblFungi:SPAC1834.02.1
GeneID:2542115 KEGG:spo:SPAC1834.02 HOGENOM:HOG000205493
OMA:FGHSIGH NextBio:20803187 GO:GO:0006558 Uniprot:Q9P7R0
Length = 1573
Score = 277 (102.6 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 93/336 (27%), Positives = 155/336 (46%)
Query: 22 VEQVLSNMYQAKAEGADVVEIRLDCI------NNFQP----GKDLEIILTKKPLPVLIVY 71
+E L + G D +E+R+D + N + + ++ LP++
Sbjct: 1064 IEDALPTLRDVTV-GCDAIEVRVDYLKDPKSSNGISSLDFVAEQISLLRCSTTLPIIFTI 1122
Query: 72 RPKWAGGLYEGDEHKRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R GGL+ D+ + + L L A G D+VD EL +S + Y H+ T+ I+S
Sbjct: 1123 RTISQGGLFPNDKEEEAKELMLSAMRYGCDFVDVELGWSSETINILYQ-HKGYTKLIMSW 1181
Query: 131 NLDCETPSEEDLGYLVSRMQATG--ADIIKLVFSVNDITEIARI--FQ--LLSHCQVPII 184
+ T S + +++ AD+IKLV N++ + + F+ + + +P+I
Sbjct: 1182 HDLSGTWSWARPHEWMQKVELASSYADVIKLVGMANNLNDNLELEEFRTRITNSMDIPLI 1241
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+++G G +S++L+ KF + + L G TV+ L + + K F L
Sbjct: 1242 LFNMGRFGQLSRILN-KFMTPVTHPLLPSKAAPGQLTVKQLNEARVLIGEILPEKFF-LF 1299
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KP+ HS+ PILH+ + + Y D + + + PDF G +V PYK +VM
Sbjct: 1300 GKPIKHSRSPILHSTAYELLGLPHTYEAFETDTVDEVQKVLNLPDFGGANVTIPYKLSVM 1359
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLI--GYNTD 338
KF DE+ A+ AVNTII KL+ G NTD
Sbjct: 1360 KFMDELSDEARFFGAVNTIIPIRIGDKLVLRGDNTD 1395
Score = 70 (29.7 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 460 VF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VF D Y P T L+ A +G+E +RQ + F+L+TG AP + + + V+
Sbjct: 1515 VFLDMAYKPLHTPLMAVASDLEWKCCNGLEALVRQGLASFHLWTGMTAPFDAVYQKVI 1572
>UNIPROTKB|P0A6D5 [details] [associations]
symbol:ydiB "YdiB" species:83333 "Escherichia coli K-12"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0030266 "quinate
3-dehydrogenase (NAD+) activity" evidence=IEA] [GO:0052734
"shikimate 3-dehydrogenase (NAD+) activity" evidence=IEA]
[GO:0052733 "quinate 3-dehydrogenase (NADP+) activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=IEA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=IEA] [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=IEA;IDA] [GO:0009423
"chorismate biosynthetic process" evidence=IEA] HAMAP:MF_01578
InterPro:IPR013708 InterPro:IPR022872 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0169 GO:GO:0004764 GO:GO:0009073
GO:GO:0009423 EMBL:X04306 HOGENOM:HOG000237875 OMA:TAIEIQA
GO:GO:0030266 PIR:D64927 RefSeq:NP_416207.1 RefSeq:YP_489954.1
PDB:1NPD PDB:1O9B PDB:1VI2 PDBsum:1NPD PDBsum:1O9B PDBsum:1VI2
ProteinModelPortal:P0A6D5 SMR:P0A6D5 DIP:DIP-47967N IntAct:P0A6D5
MINT:MINT-1283305 PRIDE:P0A6D5 EnsemblBacteria:EBESCT00000000278
EnsemblBacteria:EBESCT00000015596 GeneID:12934511 GeneID:946200
KEGG:ecj:Y75_p1667 KEGG:eco:b1692 PATRIC:32118690 EchoBASE:EB1216
EcoGene:EG11234 KO:K05887 ProtClustDB:PRK12749
BioCyc:EcoCyc:EG11234-MONOMER BioCyc:ECOL316407:JW1682-MONOMER
BioCyc:MetaCyc:EG11234-MONOMER SABIO-RK:P0A6D5
EvolutionaryTrace:P0A6D5 Genevestigator:P0A6D5 GO:GO:0052733
GO:GO:0052734 Uniprot:P0A6D5
Length = 288
Score = 242 (90.2 bits), Expect = 8.8e-20, P = 8.8e-20
Identities = 81/297 (27%), Positives = 128/297 (43%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
+ A ++ GL++ P+ HS P + N Y+ VD+ +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVV-IF---DIDFERAKSL 407
E G+ + G+ VL G + + +F D F++A +
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAF 167
Query: 408 A------SDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSE-ETLRDYQ 458
A +D + D F + IL N T +GM P + V++ L
Sbjct: 168 AQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGL 227
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
LV + VY P T+LL+ A+ AG + G M L Q QF L+TGK+ P E++++++
Sbjct: 228 LVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284
>TIGR_CMR|GSU_1490 [details] [associations]
symbol:GSU_1490 "shikimate 5-dehydrogenase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 GO:GO:0050661
EMBL:AE017180 GenomeReviews:AE017180_GR eggNOG:COG0169
GO:GO:0004764 GO:GO:0009073 GO:GO:0009423 HSSP:Q9SQT8
HOGENOM:HOG000237875 KO:K00014 GO:GO:0019632 TIGRFAMs:TIGR00507
RefSeq:NP_952541.1 ProteinModelPortal:Q74D29 GeneID:2686141
KEGG:gsu:GSU1490 PATRIC:22025827 OMA:RTEANAQ ProtClustDB:CLSK828389
BioCyc:GSUL243231:GH27-1473-MONOMER Uniprot:Q74D29
Length = 286
Score = 242 (90.2 bits), Expect = 8.8e-20, P = 8.8e-20
Identities = 78/290 (26%), Positives = 130/290 (44%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSV 295
T+V G+I +PV HS P++ N + + + YVP V++ L ++ GF+V
Sbjct: 7 TRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALGVVGFNV 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K A++ D + P A+ I A N + R SD L+GYNTD I ++ + + G+
Sbjct: 67 TIPHKSAILPLLDRLSPEAELIGAANVVKREGSD--LVGYNTDGTGFIQSLSEDL---GF 121
Query: 356 KNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLAS----DV 411
+P R+ V+ + A VVI + R + L++
Sbjct: 122 --------TPAGCRILVMGAGGAARAAVASLAGAGAASVVIANRSIARGEELSAAFRRHF 173
Query: 412 MG---AARPFE-DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
+G AA P + + LN + +L N + +GM T + + + V+D VY P
Sbjct: 174 IGTQFAAIPLDPENLNRCVQNFDLLVNTSSVGMG-GTAFPGMDLSRMGPHGAVYDMVYVP 232
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
T LL +AE G +G+ M Q L+TG P+ M+ ++A
Sbjct: 233 AVTPLLAEAERCGIRYANGIGMLAAQGECALELWTGVRPPEGLMKACLMA 282
>ASPGD|ASPL0000055969 [details] [associations]
symbol:aromA species:162425 "Emericella nidulans"
[GO:0070403 "NAD+ binding" evidence=IPI] [GO:0009073 "aromatic
amino acid family biosynthetic process" evidence=IDA;RCA]
[GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity"
evidence=RCA;IDA] [GO:0003855 "3-dehydroquinate dehydratase
activity" evidence=RCA;IDA] [GO:0004765 "shikimate kinase activity"
evidence=RCA;IDA] [GO:0003866 "3-phosphoshikimate
1-carboxyvinyltransferase activity" evidence=RCA;IDA] [GO:0009423
"chorismate biosynthetic process" evidence=IDA] [GO:0003856
"3-dehydroquinate synthase activity" evidence=RCA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001381 InterPro:IPR001986
InterPro:IPR006264 InterPro:IPR008289 InterPro:IPR010110
InterPro:IPR013708 InterPro:IPR013785 InterPro:IPR013792
InterPro:IPR016037 InterPro:IPR018508 Pfam:PF00275 Pfam:PF01487
Pfam:PF08501 PIRSF:PIRSF000514 PROSITE:PS01028 UniPathway:UPA00053
InterPro:IPR016040 InterPro:IPR006151 InterPro:IPR000623
Pfam:PF01202 Pfam:PF01488 GO:GO:0005524 GO:GO:0005737
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0003855 EMBL:BN001308
GO:GO:0046872 EMBL:AACD01000011 GO:GO:0003856 GO:GO:0003866
GO:GO:0004764 GO:GO:0004765 GO:GO:0009073 GO:GO:0009423
Gene3D:3.65.10.10 HAMAP:MF_03143 InterPro:IPR023193
PANTHER:PTHR21090:SF1 PRINTS:PR01100 SUPFAM:SSF55205
TIGRFAMs:TIGR01356 TIGRFAMs:TIGR01357 TIGRFAMs:TIGR01093
TIGRFAMs:TIGR01809 PROSITE:PS00104 PROSITE:PS00885 PROSITE:PS01128
EMBL:X05204 EMBL:AACD01000010 PIR:A24962 RefSeq:XP_658312.1
PDB:1DQS PDB:1NR5 PDB:1NRX PDB:1NUA PDB:1NVA PDB:1NVB PDB:1NVD
PDB:1NVE PDB:1NVF PDB:1SG6 PDBsum:1DQS PDBsum:1NR5 PDBsum:1NRX
PDBsum:1NUA PDBsum:1NVA PDBsum:1NVB PDBsum:1NVD PDBsum:1NVE
PDBsum:1NVF PDBsum:1SG6 ProteinModelPortal:P07547 STRING:P07547
GeneID:2876485 KEGG:ani:AN0708.2 eggNOG:COG0337
HOGENOM:HOG000007970 OrthoDB:EOG4PRWZT SABIO-RK:P07547
EvolutionaryTrace:P07547 InterPro:IPR023000 Uniprot:P07547
Length = 1583
Score = 260 (96.6 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 93/337 (27%), Positives = 154/337 (45%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + NN P D L + ++ LP++ R + GG + + H
Sbjct: 1074 GSDAVELRVDLLKDPASNNDIPSVDYVVEQLSFLRSRVTLPIIFTIRTQSQGGRFPDNAH 1133
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP-SEEDLG 143
LE LA G ++VD E+ ++L + + G I++ + D + S ++
Sbjct: 1134 DAALELYRLAFRSGCEFVDLEIAFPEDML--RAVTEMKGFSKIIASHHDPKGELSWANMS 1191
Query: 144 YLVSRMQATG-ADIIKLVF---SVNDITEIARIFQLLSHCQ-VPIIAYSVGERGLVSQLL 198
++ +A DIIKLV +++D T + + + VP+IA ++G++G +S++L
Sbjct: 1192 WIKFYNKALEYGDIIKLVGVARNIDDNTALRKFKNWAAEAHDVPLIAINMGDQGQLSRIL 1251
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKPVGHSKGPIL 256
NG + S P P S + K + + K F + P+ S+ P L
Sbjct: 1252 ----NGFMTPVSHPSLPFKAAPGQLSATEIRKGLSLMGEIKPKKFAIFGSPISQSRSPAL 1307
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN F V Y + + + SPDF G SV P K +M DEV A+
Sbjct: 1308 HNTLFAQVGLPHNYTRLETTNAQDVQEFIRSPDFGGASVTIPLKLDIMPLLDEVAAEAEI 1367
Query: 317 IAAVNTIIR----RPSDGKLIGYNTDCEASITAIEDA 349
I AVNTII + + +L+G NTD + I ++ A
Sbjct: 1368 IGAVNTIIPVSTGKNTPSRLVGRNTDWQGMILSLRKA 1404
Score = 249 (92.7 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 112/480 (23%), Positives = 195/480 (40%)
Query: 54 KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNI 112
+ L + ++ LP++ R + GG + + H LE LA G ++VD E+ ++
Sbjct: 1102 EQLSFLRSRVTLPIIFTIRTQSQGGRFPDNAHDAALELYRLAFRSGCEFVDLEIAFPEDM 1161
Query: 113 LGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG-ADIIKLVF---SVNDITE 168
L + + + ++ I S + S ++ ++ +A DIIKLV +++D T
Sbjct: 1162 L-RAVTEMKGFSKIIASHHDPKGELSWANMSWIKFYNKALEYGDIIKLVGVARNIDDNTA 1220
Query: 169 IARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQ 227
+ + + VP+IA ++G++G +S++L NG + S P P S +
Sbjct: 1221 LRKFKNWAAEAHDVPLIAINMGDQGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSATE 1276
Query: 228 TYKVEHINADTKV--FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY 285
K + + K F + P+ S+ P LHN F V Y + + +
Sbjct: 1277 IRKGLSLMGEIKPKKFAIFGSPISQSRSPALHNTLFAQVGLPHNYTRLETTNAQDVQEFI 1336
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR----RPSDGKLIGYNTDCEA 341
SPDF G SV P K +M DEV A+ I AVNTII + + +L+G NTD +
Sbjct: 1337 RSPDFGGASVTIPLKLDIMPLLDEVAAEAEIIGAVNTIIPVSTGKNTPSRLVGRNTDWQG 1396
Query: 342 SITAIEDA----IKERGYKNGTASFGSPLAGR--MFVLXXXXXXXXXXXXXXKSR----- 390
I ++ A K + + G R ++ L S+
Sbjct: 1397 MILSLRKAGVYGPKRKDQEQSALVVGGGGTARAAIYALHNMGYSPIYIVGRTPSKLENMV 1456
Query: 391 -------GARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPN 443
R+V FE +A + A +P + P L + +
Sbjct: 1457 STFPSSYNIRIVESPSSFESVPHVAIGTIPADQPID------PTMRETLCHMFERAQEAD 1510
Query: 444 TDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+ V E R ++ + Y P+ T L++ A +G + G+E+ + Q QF +TG
Sbjct: 1511 AEAVKAIEHAPR---ILLEMAYKPQVTALMRLASDSGWKTIPGLEVLVGQGWYQFKYWTG 1567
>TIGR_CMR|CBU_2075 [details] [associations]
symbol:CBU_2075 "3-dehydroquinate dehydratase, type I"
species:227377 "Coxiella burnetii RSA 493" [GO:0003855
"3-dehydroquinate dehydratase activity" evidence=ISS] [GO:0009073
"aromatic amino acid family biosynthetic process" evidence=ISS]
HAMAP:MF_00214 InterPro:IPR001381 InterPro:IPR013785 Pfam:PF01487
PROSITE:PS01028 UniPathway:UPA00053 Gene3D:3.20.20.70 GO:GO:0003855
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0009073 GO:GO:0009423
TIGRFAMs:TIGR01093 RefSeq:NP_821045.1 HSSP:Q9SQT8
ProteinModelPortal:Q83A36 PRIDE:Q83A36 GeneID:1209988
KEGG:cbu:CBU_2075 PATRIC:17932897 eggNOG:COG0710
HOGENOM:HOG000033727 KO:K03785 OMA:IFTVRRR ProtClustDB:CLSK915225
BioCyc:CBUR227377:GJ7S-2041-MONOMER Uniprot:Q83A36
Length = 233
Score = 226 (84.6 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 58/207 (28%), Positives = 100/207 (48%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVL 68
NT IC ++ +++E+ LS + +A D VE+R+D + P + II +
Sbjct: 3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAI 60
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
+ R + GG + G + E L DLG DY+D +L VA+ I S H+ + I+
Sbjct: 61 LCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI-----SIHEKKAKIII 115
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ--VPIIAY 186
S + TP +L +L+ M+ D+ K ++ +F+LL + + +I
Sbjct: 116 SYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKKNNENMIVL 175
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKG 213
+GE+G + +LLSP G L + S+ G
Sbjct: 176 GMGEQGKIIRLLSPLLGGYLTFSSING 202
>UNIPROTKB|Q48JV1 [details] [associations]
symbol:aroE "Shikimate dehydrogenase" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_00222 InterPro:IPR013708
InterPro:IPR022893 Pfam:PF08501 UniPathway:UPA00053
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG0169 GO:GO:0004764
GO:GO:0009073 GO:GO:0009423 HOGENOM:HOG000237875 KO:K00014
RefSeq:YP_274326.1 ProteinModelPortal:Q48JV1 STRING:Q48JV1
GeneID:3559332 KEGG:psp:PSPPH_2107 PATRIC:19973438 OMA:HEHEGDA
ProtClustDB:PRK12549 Uniprot:Q48JV1
Length = 284
Score = 216 (81.1 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 80/293 (27%), Positives = 128/293 (43%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK-------KFFSTY 285
H + + GLI + S+ P +H +Y + +D L+ + +
Sbjct: 3 HAEKKSVLAGLIGSGIQASRTPAMHEHEGDAQGLRYLYRLIDIDALQLDISALPQLIESA 62
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
+ F G ++ FP K+AV+ DE+ A+ I AVNT++ + GK IG+NTDC
Sbjct: 63 QNCGFTGLNITFPCKQAVIPLLDELSAEARGIGAVNTVVFK--GGKRIGHNTDCLGFAEG 120
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGAR-VVIFDIDFERA 404
+ + ++ + G+ AG S G + +F+++ +RA
Sbjct: 121 FQRGL-DKAPRQQVVQMGAGGAG------------AAVAHALLSAGVECLTVFEVEPQRA 167
Query: 405 KSLASDV---MGAARPFEDI-LNFQPEKGAILANATPLGMH--PNTDRVPVSEETLRDYQ 458
+ L ++ GA R I L + L N TP+GM P T P+ E LR
Sbjct: 168 QGLVDNLNEHFGAGRAKVGIDLPAAMAEADGLVNTTPVGMAKLPGT---PLPVELLRPEL 224
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
V + +Y P +T LLK A A G + G M + QA+ F LF+G+ A E M
Sbjct: 225 WVAEIIYFPLETELLKHARALGCRTLDGSTMAVFQAVKAFELFSGQSADAERM 277
>SGD|S000002534 [details] [associations]
symbol:ARO1 "Pentafunctional arom protein" species:4932
"Saccharomyces cerevisiae" [GO:0003866 "3-phosphoshikimate
1-carboxyvinyltransferase activity" evidence=IEA;IDA] [GO:0004765
"shikimate kinase activity" evidence=IEA;IDA] [GO:0003856
"3-dehydroquinate synthase activity" evidence=IEA;IDA] [GO:0004764
"shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA;IDA]
[GO:0003855 "3-dehydroquinate dehydratase activity"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008652 "cellular
amino acid biosynthetic process" evidence=IEA] [GO:0009073
"aromatic amino acid family biosynthetic process" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IEA] [GO:0009423 "chorismate biosynthetic
process" evidence=IEA;TAS] InterPro:IPR001381 InterPro:IPR001986
InterPro:IPR006264 InterPro:IPR008289 InterPro:IPR010110
InterPro:IPR013708 InterPro:IPR013785 InterPro:IPR013792
InterPro:IPR016037 InterPro:IPR018508 Pfam:PF00275 Pfam:PF01487
Pfam:PF08501 PIRSF:PIRSF000514 PROSITE:PS01028 UniPathway:UPA00053
InterPro:IPR016040 InterPro:IPR006151 InterPro:IPR000623
SGD:S000002534 Pfam:PF01202 Pfam:PF01488 GO:GO:0005524
GO:GO:0005737 Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0003855
GO:GO:0046872 EMBL:BK006938 eggNOG:COG0169 KO:K13830 GO:GO:0003856
GO:GO:0003866 GO:GO:0004764 GO:GO:0004765 GO:GO:0009073
GO:GO:0009423 Gene3D:3.65.10.10 HAMAP:MF_03143 InterPro:IPR023193
PANTHER:PTHR21090:SF1 PRINTS:PR01100 SUPFAM:SSF55205
TIGRFAMs:TIGR01356 TIGRFAMs:TIGR01357 TIGRFAMs:TIGR01093
TIGRFAMs:TIGR01809 PROSITE:PS00104 PROSITE:PS00885 PROSITE:PS01128
OrthoDB:EOG4PRWZT InterPro:IPR023000 HOGENOM:HOG000205493
OMA:FGHSIGH EMBL:X06077 EMBL:Z48179 EMBL:X13802 EMBL:X13803
PIR:A32519 RefSeq:NP_010412.1 ProteinModelPortal:P08566 SMR:P08566
DIP:DIP-2611N IntAct:P08566 MINT:MINT-426824 STRING:P08566
PaxDb:P08566 PeptideAtlas:P08566 EnsemblFungi:YDR127W GeneID:851705
KEGG:sce:YDR127W CYGD:YDR127w GeneTree:ENSGT00390000011238
BioCyc:MetaCyc:YDR127W-MONOMER NextBio:969386 Genevestigator:P08566
GermOnline:YDR127W Uniprot:P08566
Length = 1588
Score = 222 (83.2 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 81/315 (25%), Positives = 144/315 (45%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIIL-TKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91
G + VE+R+D + N+ K L I+ +P++ R GG + +E K L L
Sbjct: 1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158
Query: 92 H-LAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRM 149
+ +A G +++D EL + ++I QY ++ G I+ + D + D +R
Sbjct: 1159 YDIALKNGVEFLDLELTLPTDI---QYEVINKRGNTKIIGSHHDFQGLYSWDDAEWENRF 1215
Query: 150 -QAT--GADIIKLVFSVNDITEIARIFQLL-SHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
QA D++K V + + + R+ +H P+IA ++ +G +S++L+
Sbjct: 1216 NQALTLDVDVVKFVGTAVNFEDNLRLEHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT-P 1274
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ L + G TV + + Y + K ++ KP+GHS+ PILHN + +
Sbjct: 1275 VTSDLLPNSAAPGQLTVAQINKMY-TSMGGIEPKELFVVGKPIGHSRSPILHNTGYEILG 1333
Query: 266 YNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
+ + L K + +F G +V P K +M++ DE+ A+ I AVNT+
Sbjct: 1334 LPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNTV 1393
Query: 324 IRRPSDGKLIGYNTD 338
I + K G NTD
Sbjct: 1394 IPL-GNKKFKGDNTD 1407
Score = 55 (24.4 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 460 VFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAP 507
+ +A Y P T ++ ++ +V G +M + Q + QF +TG + P
Sbjct: 1529 LLEAAYKPSVTPVMTISQDKYQWHVVPGSQMLVHQGVAQFEKWTGFKGP 1577
>ASPGD|ASPL0000057652 [details] [associations]
symbol:qutR species:162425 "Emericella nidulans"
[GO:0019631 "quinate catabolic process" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0003855
"3-dehydroquinate dehydratase activity" evidence=IEA] [GO:0004765
"shikimate kinase activity" evidence=IEA] [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001381 InterPro:IPR013708
InterPro:IPR013785 Pfam:PF01487 Pfam:PF08501 InterPro:IPR016040
InterPro:IPR006151 InterPro:IPR000623 Pfam:PF01202 Pfam:PF01488
GO:GO:0005524 GO:GO:0006355 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0003855 GO:GO:0019630 EMBL:AACD01000016 EMBL:BN001308
GO:GO:0006351 eggNOG:COG0169 GO:GO:0004764 GO:GO:0004765
PRINTS:PR01100 EMBL:M77664 EMBL:M59935 PIR:JH0262
RefSeq:XP_658736.1 ProteinModelPortal:Q00784 STRING:Q00784
EnsemblFungi:CADANIAT00001497 GeneID:2876909 KEGG:ani:AN1132.2
HOGENOM:HOG000169107 OMA:PEQGFAQ OrthoDB:EOG4CG3HC Uniprot:Q00784
Length = 901
Score = 161 (61.7 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 58/240 (24%), Positives = 102/240 (42%)
Query: 97 LGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSE--EDLGY--LVSRMQAT 152
LG ++V +L +IL + + G+ ++ + P + D Y + R +
Sbjct: 410 LGPEFVTVDLSFEDSILSQIIGT--KGSSKVIGHYSQTQPPPQGWSDPEYEAIYERAKKL 467
Query: 153 GADIIKLV---FSVNDITEIARI---FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
G D+++L +++D + R + L Q+P+IAY+ G G S +P +
Sbjct: 468 GCDMVRLTQPATTIDDNFAVERFRHQIKTLPGPQLPVIAYNSGPLGRQSCCFNPVLTPVI 527
Query: 207 VYGSLKGTPVLGLP--TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHV 264
+ + GLP T++ ++ + D F + +S P +HN F+
Sbjct: 528 PRSLISQSGTKGLPSITIQEAQEALYSSFV-LDPMQFFVFGANTTYSLSPAMHNAAFKVR 586
Query: 265 NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII 324
IY L+ +P+F G SV PYK V+ + P A+AI AVNT+I
Sbjct: 587 GMPHIYRIHQSPTLRGINYLVENPNFGGTSVSLPYKTEVIPLLHSMSPHARAIGAVNTLI 646
Score = 95 (38.5 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 459 LVFDAVYTPRKTRLLKDAEAA---GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D Y P T L++ + G + G+++ Q QF LFTG AP+ MR ++
Sbjct: 812 VVVDLAYKPLNTPLMRQIRSLSHRGWAALDGLDVLPEQGFAQFELFTGCRAPRRLMRTVI 871
Query: 516 LAKF 519
L ++
Sbjct: 872 LQEY 875
>TIGR_CMR|SPO_2425 [details] [associations]
symbol:SPO_2425 "shikimate 5-dehydrogenase/quinate
5-dehydrogenase family protein" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008152 "metabolic process" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=ISS] HAMAP:MF_00222
InterPro:IPR013708 InterPro:IPR022893 Pfam:PF08501
UniPathway:UPA00053 InterPro:IPR016040 InterPro:IPR006151
Pfam:PF01488 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004764 GO:GO:0009073 GO:GO:0009423
HOGENOM:HOG000237875 KO:K00014 ProtClustDB:PRK12549
RefSeq:YP_167642.1 ProteinModelPortal:Q5LQR3 GeneID:3193039
KEGG:sil:SPO2425 PATRIC:23378247 OMA:RIADIDP Uniprot:Q5LQR3
Length = 275
Score = 133 (51.9 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 39/122 (31%), Positives = 59/122 (48%)
Query: 393 RVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE 452
+++I D D RA +LA+ A +I P + NATP+GM +P+
Sbjct: 152 QLLITDRDMPRALALAAATGAGALAGSEIT---PNMADGVVNATPVGM-AKLPGMPMDPA 207
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
L Q V D +Y P +T L+ A A G + +G M + QA+ F LFTG+ A M+
Sbjct: 208 LLAPAQWVVDIIYFPLETAFLRAARARGCRVTNGRAMAVYQAVRAFELFTGQVAQAGRMQ 267
Query: 513 EI 514
+
Sbjct: 268 AV 269
Score = 107 (42.7 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDC----EASITA 345
+AG ++ +PYK+ V+ + P A AI A NT++ R DG+ G+N+D EA
Sbjct: 63 YAGLNITYPYKQEVLSHLHHLSPAAAAIGAANTVVFR--DGQRFGHNSDAWGFAEAMRKT 120
Query: 346 IEDAIKERGYKNGTASFGSPLA 367
+ D +R G GS +A
Sbjct: 121 MPDIRLDRVLLIGAGGAGSAVA 142
>TIGR_CMR|DET_0466 [details] [associations]
symbol:DET_0466 "3-dehydroquinate dehydratase, type I"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003855
"3-dehydroquinate dehydratase activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00214
InterPro:IPR001381 InterPro:IPR013785 Pfam:PF01487 PROSITE:PS01028
UniPathway:UPA00053 Gene3D:3.20.20.70 GO:GO:0003855 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0009073 GO:GO:0009423
TIGRFAMs:TIGR01093 HSSP:Q9SQT8 eggNOG:COG0710 KO:K03785
RefSeq:YP_181210.1 ProteinModelPortal:Q3Z989 STRING:Q3Z989
GeneID:3230169 KEGG:det:DET0466 PATRIC:21608001
HOGENOM:HOG000105515 OMA:IESYHNF ProtClustDB:CLSK837439
BioCyc:DETH243164:GJNF-466-MONOMER Uniprot:Q3Z989
Length = 222
Score = 174 (66.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 55/203 (27%), Positives = 97/203 (47%)
Query: 33 KAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
K+EGA E+RLD + + ++ +L K P + R GG + G E +R+ L
Sbjct: 21 KSEGAAFYELRLDLLG--ESWREAAAMLDK---PFMATCRRSAEGGSFSGSEEERIGLLE 75
Query: 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQAT 152
A GA +D E LG+ ++ ++ +VS + +TPS DL LV M
Sbjct: 76 KAAAAGAFMLDIEYSTPH--LGEVLKRLRTQSKCLVSHHNFADTPSAGDLKTLVKDMLNY 133
Query: 153 GADIIKLVFSVNDITEIARIFQLLSHCQVP---IIAYSVGERGLVSQLLSPKFNGALVYG 209
ADI K++ + I + ++ L+ ++P I+A+++G G++S++L P Y
Sbjct: 134 PADIYKVITTATSINDNIKLLNLIK--EIPDKKIVAFAMGNLGILSRILCPLAGSPFTYA 191
Query: 210 SLKGT--PVLGLPTVESLRQTYK 230
SL + G T+ + + Y+
Sbjct: 192 SLNDSNQSASGQMTLAQMIEIYR 214
>UNIPROTKB|P95001 [details] [associations]
symbol:aroE "Shikimate 5-dehydrogenase" species:1773
"Mycobacterium tuberculosis" [GO:0004764 "shikimate 3-dehydrogenase
(NADP+) activity" evidence=IDA;TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0009423 "chorismate biosynthetic process"
evidence=TAS] [GO:0040007 "growth" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI]
InterPro:IPR010110 InterPro:IPR013708 Pfam:PF08501
InterPro:IPR016040 InterPro:IPR006151 Pfam:PF01488 GO:GO:0005829
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0004764 GO:GO:0009423 TIGRFAMs:TIGR01809
Reactome:REACT_27295 HOGENOM:HOG000237875 KO:K00014 HSSP:P15770
ProtClustDB:PRK00258 EMBL:AL123456 PIR:D70660 RefSeq:NP_217068.1
RefSeq:NP_337127.1 RefSeq:YP_006515994.1 SMR:P95001 DNASU:887330
EnsemblBacteria:EBMYCT00000001732 EnsemblBacteria:EBMYCT00000072843
GeneID:13319272 GeneID:887330 GeneID:922457 KEGG:mtc:MT2629
KEGG:mtu:Rv2552c KEGG:mtv:RVBD_2552c PATRIC:18127530
TubercuList:Rv2552c OMA:ERIECTG Uniprot:P95001
Length = 269
Score = 111 (44.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
TL ++ DA+Y P T L +AG ++SG++M L QA Q FTG AP+E M
Sbjct: 203 TLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAM 261
Score = 110 (43.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVN-YNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 295
K G++ P+ HS+ P LH +R + ++ Y + +L + P++ G SV
Sbjct: 6 KKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFG-PEWVGVSV 64
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
P K A ++F DE A + + NT++R P + NTD + A+
Sbjct: 65 TMPGKFAALRFADERTARADLVGSANTLVRTPHGWR--ADNTDIDGVAGAL 113
>TIGR_CMR|CPS_0030 [details] [associations]
symbol:CPS_0030 "shikimate 5-dehydrogenase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 GO:GO:0050661
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0169
GO:GO:0004764 GO:GO:0009073 GO:GO:0009423 HSSP:Q9SQT8 KO:K00014
GO:GO:0019632 TIGRFAMs:TIGR00507 RefSeq:YP_266812.1
ProteinModelPortal:Q48AV5 SMR:Q48AV5 STRING:Q48AV5 GeneID:3521306
KEGG:cps:CPS_0030 PATRIC:21463493 HOGENOM:HOG000237876 OMA:FAAQTGI
BioCyc:CPSY167879:GI48-147-MONOMER Uniprot:Q48AV5
Length = 275
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 68/272 (25%), Positives = 115/272 (42%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGI-YVPMFVD--DLKKFFSTYSSPDFAGFSV 295
+VFG P+ SK P +H+ F + I Y VD D + + G +V
Sbjct: 10 RVFG---NPIEQSKSPAIHH-IFADKSQQNIDYQKQLVDTKDFSNAVADFIRHGGKGANV 65
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE + DE+ A AVNT+ + +GK+ G NTD E ++D I +
Sbjct: 66 TAPFKEQALAIADELTERATLAGAVNTLTFK--NGKIFGDNTDGEG---LVQDLITNKVI 120
Query: 356 KNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLA---SDVM 412
N + R+ +L +VI + +A +L SD+
Sbjct: 121 LNES---------RVLLLGAGGAARGVLLPLLAQNPRSIVIANRTASKAATLCQHFSDIR 171
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
+A ++D+ + + ++ NAT + N +P S L + +D VY +T
Sbjct: 172 LSASGYQDL---EQQHFDVIINATSASLSGNLPPIPTS--LLSQNVVCYDMVYGKDETPF 226
Query: 473 LKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTG 503
LK A+ GA+ ++ G+ M + QA F ++ G
Sbjct: 227 LKWAKEHGAMKVIDGLGMLVGQAAVSFEVWRG 258
>ASPGD|ASPL0000061936 [details] [associations]
symbol:qutB species:162425 "Emericella nidulans"
[GO:0030266 "quinate 3-dehydrogenase (NAD+) activity"
evidence=IDA;RCA] [GO:0019631 "quinate catabolic process"
evidence=IDA;IMP] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR013708 Pfam:PF08501 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 GO:GO:0000166 Gene3D:3.40.50.720
UniPathway:UPA00088 GO:GO:0019630 EMBL:X13525 EMBL:AACD01000016
EMBL:BN001308 eggNOG:COG0169 GO:GO:0004764 HOGENOM:HOG000237875
PIR:S08499 RefSeq:XP_658741.1 ProteinModelPortal:P25415
STRING:P25415 EnsemblFungi:CADANIAT00001492 GeneID:2876912
KEGG:ani:AN1137.2 KO:K09484 OMA:AGACNTI OrthoDB:EOG4DRDN5
BioCyc:MetaCyc:MONOMER-15333 GO:GO:0030266 Uniprot:P25415
Length = 329
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 78/300 (26%), Positives = 125/300 (41%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPM-------FV--DDLKKFFSTY-SSPDFAG 292
L P+ +S P LH + + N +P+ F ++ F S+ S+P F G
Sbjct: 16 LYGHPLRNSLSPPLHQTVYNALGLNWTQIPLSTATGTSFTRSPEISTFLSSVRSNPKFVG 75
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGKL--IGYNTDCEASITAIEDA 349
SV P+K A+M D++ A+ A NTI +R+ DGK +G NTDC I +A
Sbjct: 76 SSVTMPWKVAIMPHLDDLTEDARQAGACNTIYLRKEDDGKTQYVGTNTDC----IGIREA 131
Query: 350 IKERGYKNGTASF-GSPLAGRMFVLXXXXXXXXXXXXXXKSRG-ARVVIFDIDFERAKS- 406
+ + G NG F G P ++ K G +++ I + D + ++
Sbjct: 132 LLQ-GSPNGAEHFKGKPA----LIVGGGGTARTAIYVLRKWLGVSKIYIVNRDAKEVEAI 186
Query: 407 LASDVMGAARPFEDILNFQ-PEKGAILAN--ATPLGMH---PNTDRVPVSEETLR----- 455
LA D P ++ P A L A G+ P T+ + ETLR
Sbjct: 187 LAEDKQRNPSPQVALVPVSDPSAAATLEAPVAVVSGIPNYPPQTEEEIRARETLRVFLNR 246
Query: 456 -----DYQLVFDAVYTPRK-TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
D ++ + Y P T + + A+ A ++ G E + Q + Q L+TGK+ E
Sbjct: 247 QTHEKDQGVILEMCYHPLPWTDIAQIAQDARWKVILGSEALIWQGLEQARLWTGKDVVSE 306
>UNIPROTKB|P05194 [details] [associations]
symbol:aroD "AroD" species:83333 "Escherichia coli K-12"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0016829 "lyase
activity" evidence=IEA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=IEA] [GO:0008652 "cellular amino
acid biosynthetic process" evidence=IEA] [GO:0003855
"3-dehydroquinate dehydratase activity" evidence=IEA] [GO:0009423
"chorismate biosynthetic process" evidence=IEA] HAMAP:MF_00214
InterPro:IPR001381 InterPro:IPR013785 InterPro:IPR018508
Pfam:PF01487 PROSITE:PS01028 UniPathway:UPA00053 Gene3D:3.20.20.70
GO:GO:0003855 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009073 GO:GO:0009423
TIGRFAMs:TIGR01093 eggNOG:COG0710 KO:K03785 EMBL:X59503 EMBL:X04306
PIR:S14750 RefSeq:NP_416208.1 RefSeq:YP_489955.1
ProteinModelPortal:P05194 SMR:P05194 IntAct:P05194
SWISS-2DPAGE:P05194 PRIDE:P05194 EnsemblBacteria:EBESCT00000003119
EnsemblBacteria:EBESCT00000016217 GeneID:12931295 GeneID:946210
KEGG:ecj:Y75_p1668 KEGG:eco:b1693 PATRIC:32118692 EchoBASE:EB0074
EcoGene:EG10076 HOGENOM:HOG000105514 OMA:IIEWRVD
ProtClustDB:PRK02412 BioCyc:EcoCyc:AROD-MONOMER
BioCyc:ECOL316407:JW1683-MONOMER BioCyc:MetaCyc:AROD-MONOMER
BindingDB:P05194 ChEMBL:CHEMBL4709 Genevestigator:P05194
Uniprot:P05194
Length = 252
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 59/234 (25%), Positives = 103/234 (44%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDC---INNFQPGKDLEIIL--TKKPLPV 67
I LMA+ + V S + D++E R+D ++N + IL T P+
Sbjct: 18 IIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVESVMAAAKILRETMPEKPL 77
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLG-ADYVDFELKVASNILGKQYS-SHQSGTR 125
L +R GG + A D G D +D EL + + + + +H +
Sbjct: 78 LFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVK 137
Query: 126 FIVSCNLDC-ETPSEEDLGYLVSRMQATGADIIKLVF---SVNDI-TEIARIFQLLS-HC 179
++S N D +TP E++ + +MQ+ ADI K+ S +D+ T +A ++ +
Sbjct: 138 VVMS-NHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYA 196
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEH 233
PII S+ + G++S+L F A +G++K G +V LR + H
Sbjct: 197 DRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVNDLRTVLTILH 250
>UNIPROTKB|P15770 [details] [associations]
symbol:aroE "shikimate dehydrogenase" species:83333
"Escherichia coli K-12" [GO:0050661 "NADP binding" evidence=IEA]
[GO:0019632 "shikimate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=IEA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=IEA] [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=IEA] [GO:0009423
"chorismate biosynthetic process" evidence=IEA] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0050661 EMBL:U18997 eggNOG:COG0169 GO:GO:0004764
GO:GO:0009073 GO:GO:0009423 KO:K00014 GO:GO:0019632
TIGRFAMs:TIGR00507 HOGENOM:HOG000237876 ProtClustDB:PRK00258
EMBL:Y00710 PIR:S00252 RefSeq:NP_417740.1 RefSeq:YP_492151.1
PDB:1NYT PDBsum:1NYT ProteinModelPortal:P15770 SMR:P15770
DIP:DIP-9153N IntAct:P15770 MINT:MINT-1246863
EnsemblBacteria:EBESCT00000001413 EnsemblBacteria:EBESCT00000016050
GeneID:12932876 GeneID:947776 KEGG:ecj:Y75_p3895 KEGG:eco:b3281
PATRIC:32121996 EchoBASE:EB0075 EcoGene:EG10077 OMA:HLWRGVM
BioCyc:EcoCyc:AROE-MONOMER BioCyc:ECOL316407:JW3242-MONOMER
BioCyc:MetaCyc:AROE-MONOMER BRENDA:1.1.1.25 SABIO-RK:P15770
EvolutionaryTrace:P15770 Genevestigator:P15770 Uniprot:P15770
Length = 272
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 72/275 (26%), Positives = 109/275 (39%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPM--FVDDLKKFFSTYSSPDFAG 292
+ + + P+ HSK P +H + +N Y + P+ F++ L FFS G
Sbjct: 2 ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGK----G 57
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V P+KE DE+ A AVNT++R DG+L+G NTD + + D E
Sbjct: 58 ANVTVPFKEEAFARADELTERAALAGAVNTLMRL-EDGRLLGDNTD---GVGLLSDL--E 111
Query: 353 RGYKNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDVM 412
R SF P G +L S V I + RA+ LA +
Sbjct: 112 R------LSFIRP--GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK--L 161
Query: 413 GAARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
A L+ +G ++ NAT G+ + +P S + +D Y K
Sbjct: 162 FAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSS--LIHPGIYCYDMFYQKGK 219
Query: 470 TRLLKDAEAAGAII-VSGVEMFLRQAIGQFNLFTG 503
T L E G+ G+ M + QA F L+ G
Sbjct: 220 TPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHG 254
>UNIPROTKB|Q9KVT3 [details] [associations]
symbol:aroE "Shikimate dehydrogenase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00222 InterPro:IPR011342 InterPro:IPR013708
InterPro:IPR022893 Pfam:PF08501 UniPathway:UPA00053
InterPro:IPR016040 InterPro:IPR006151 Pfam:PF01488
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 eggNOG:COG0169 GO:GO:0004764 GO:GO:0009073
GO:GO:0009423 KO:K00014 GO:GO:0019632 TIGRFAMs:TIGR00507
ProtClustDB:PRK00258 OMA:HLWRGVM PIR:G82370 RefSeq:NP_229715.1
PDB:3PGJ PDB:3SEF PDBsum:3PGJ PDBsum:3SEF ProteinModelPortal:Q9KVT3
SMR:Q9KVT3 DNASU:2614442 GeneID:2614442 KEGG:vch:VC0056
PATRIC:20079158 Uniprot:Q9KVT3
Length = 278
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 62/283 (21%), Positives = 115/283 (40%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIY----VPM--FVDDLKKFFSTYSSPDFAGFS 294
+ + P+ HSK P +H R + IY VP+ F + K FF+ G +
Sbjct: 8 YAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR----GCN 63
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KE +F D + A+ AVNT+ ++ DG+++G NTD E ++D + ++
Sbjct: 64 VTVPFKEEAYRFADRLTERARLAGAVNTL-KKLDDGEILGDNTDGEG---LVQDLLAQQV 119
Query: 355 YKNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDVMGA 414
G + ++ + A + + + F +A+ LA V
Sbjct: 120 LLKGAT---------ILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY 170
Query: 415 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV-FDAVYTPRKTRLL 473
+ ++ N+T + +P + + + V +D +Y T
Sbjct: 171 GEVKAQAFEQLKQSYDVIINSTSASLD---GELPAIDPVIFSSRSVCYDMMYGKGYTVFN 227
Query: 474 KDAEAAG-AIIVSGVEMFLRQAIGQFNLFTG-KEAPKEFMREI 514
+ A G A + G+ M + QA F L+ G + K+ +RE+
Sbjct: 228 QWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILREL 270
>TIGR_CMR|VC_0056 [details] [associations]
symbol:VC_0056 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 eggNOG:COG0169
GO:GO:0004764 GO:GO:0009073 GO:GO:0009423 KO:K00014 GO:GO:0019632
TIGRFAMs:TIGR00507 ProtClustDB:PRK00258 OMA:HLWRGVM PIR:G82370
RefSeq:NP_229715.1 PDB:3PGJ PDB:3SEF PDBsum:3PGJ PDBsum:3SEF
ProteinModelPortal:Q9KVT3 SMR:Q9KVT3 DNASU:2614442 GeneID:2614442
KEGG:vch:VC0056 PATRIC:20079158 Uniprot:Q9KVT3
Length = 278
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 62/283 (21%), Positives = 115/283 (40%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIY----VPM--FVDDLKKFFSTYSSPDFAGFS 294
+ + P+ HSK P +H R + IY VP+ F + K FF+ G +
Sbjct: 8 YAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR----GCN 63
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KE +F D + A+ AVNT+ ++ DG+++G NTD E ++D + ++
Sbjct: 64 VTVPFKEEAYRFADRLTERARLAGAVNTL-KKLDDGEILGDNTDGEG---LVQDLLAQQV 119
Query: 355 YKNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDVMGA 414
G + ++ + A + + + F +A+ LA V
Sbjct: 120 LLKGAT---------ILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY 170
Query: 415 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV-FDAVYTPRKTRLL 473
+ ++ N+T + +P + + + V +D +Y T
Sbjct: 171 GEVKAQAFEQLKQSYDVIINSTSASLD---GELPAIDPVIFSSRSVCYDMMYGKGYTVFN 227
Query: 474 KDAEAAG-AIIVSGVEMFLRQAIGQFNLFTG-KEAPKEFMREI 514
+ A G A + G+ M + QA F L+ G + K+ +RE+
Sbjct: 228 QWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILREL 270
>ASPGD|ASPL0000046734 [details] [associations]
symbol:AN8886 species:162425 "Emericella nidulans"
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0004764 "shikimate 3-dehydrogenase (NADP+)
activity" evidence=RCA] [GO:0004765 "shikimate kinase activity"
evidence=RCA] [GO:0003855 "3-dehydroquinate dehydratase activity"
evidence=RCA] [GO:0003856 "3-dehydroquinate synthase activity"
evidence=RCA] [GO:0003866 "3-phosphoshikimate
1-carboxyvinyltransferase activity" evidence=RCA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001381 InterPro:IPR013708 InterPro:IPR013785
Pfam:PF01487 Pfam:PF08501 InterPro:IPR016040 InterPro:IPR006151
InterPro:IPR000623 Pfam:PF01202 Pfam:PF01488 GO:GO:0005524
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0003855 EMBL:BN001307
eggNOG:COG0169 GO:GO:0004764 GO:GO:0004765 PRINTS:PR01100
EMBL:AACD01000164 HOGENOM:HOG000169107 OrthoDB:EOG4CG3HC
RefSeq:XP_682155.1 ProteinModelPortal:Q5AS44
EnsemblFungi:CADANIAT00007983 GeneID:2868307 KEGG:ani:AN8886.2
OMA:ITEDHYF Uniprot:Q5AS44
Length = 804
Score = 125 (49.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 47/188 (25%), Positives = 85/188 (45%)
Query: 156 IIKLVFSVNDITEIARI---FQLLSHCQVPIIAYSVGERGLVSQ----LLSPKFNGAL-- 206
I+++ D IA+ +LL P+IA+++G G SQ +L+ + A+
Sbjct: 380 ILRVATEREDNAAIAKFTNRIELLPGDHPPVIAFNLGSLGRTSQVFNSILTSVSHSAIDR 439
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNY 266
+ + + ++ V++L Q+Y ++ + F ++ V +S P ++N FRH
Sbjct: 440 LSHNERDPQIMARDAVQALFQSYVLDPLQ-----FYILGGSVAYSLSPAMYNAAFRHCGM 494
Query: 267 NGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI--I 324
N Y L P+F G S+ P++ V + A+AI A+NTI +
Sbjct: 495 NHTYSIPEKPTLAALDELGRDPNFGGASIVQPWRVQVFQKLAAKSRHAEAIGAINTIMPL 554
Query: 325 RRPSDGKL 332
R SDG +
Sbjct: 555 RGHSDGTM 562
Score = 73 (30.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 459 LVFDAVYTPRKTRLLKDAEA----AGAI--IVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
+V + Y P +T LL+ G +V G++ QAI QF + TG++AP+ M
Sbjct: 718 VVLEFAYKPLETPLLRQMRRFRSETGRQWELVDGLDNVAEQAIAQFEILTGRKAPRRLM 776
>TIGR_CMR|SO_0040 [details] [associations]
symbol:SO_0040 "shikimate 5-dehydrogenase" species:211586
"Shewanella oneidensis MR-1" [GO:0004764 "shikimate 3-dehydrogenase
(NADP+) activity" evidence=ISS] [GO:0009423 "chorismate
biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 GO:GO:0050661
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0169
GO:GO:0004764 GO:GO:0009073 GO:GO:0009423 KO:K00014 GO:GO:0019632
TIGRFAMs:TIGR00507 HOGENOM:HOG000237876 HSSP:P15770
ProtClustDB:PRK00258 RefSeq:NP_715682.1 ProteinModelPortal:Q8EKQ0
SMR:Q8EKQ0 GeneID:1167938 KEGG:son:SO_0040 PATRIC:23519771
OMA:DLEYSAI Uniprot:Q8EKQ0
Length = 287
Score = 141 (54.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 63/270 (23%), Positives = 105/270 (38%)
Query: 241 FGLISKPVGHSKGPILHNP----TFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFS 294
+ + P+GHSK P +H T + Y I P+ F LK FFS+ G +
Sbjct: 11 YAVFGHPIGHSKSPFIHGQFAALTQESLTYEAILAPIDGFEASLKSFFSSGGK----GAN 66
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KE CD + A AVNT+ +DG + G NTD + + D I G
Sbjct: 67 VTVPFKEQAFALCDSLSAEAALAGAVNTLSLL-ADGSIRGDNTD---GLGLVADLISHLG 122
Query: 355 --YKNGTASFGSPLAGRMFVLXXXXXXXXXXXXXXKSRGARVVIFDIDFERAKSLASDVM 412
G+ A R +L +++ + DI + + + D +
Sbjct: 123 SLQHKRVLLVGAGGAARGCILPLLNAGVGQLVITNRTQTKAKDLVDIFSQLEEGIYKDKL 182
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
A E F+ ++ N+T + P+ + + + +D +Y T
Sbjct: 183 QALSMSELTGEFE-----LVINSTSASLAGELP--PLPQSIIGSTTVCYDMMYGAMPTAF 235
Query: 473 LKDAEAAGAI-IVSGVEMFLRQAIGQFNLF 501
+ A GA ++ G+ M + QA F L+
Sbjct: 236 NQWALQQGAAKVIDGLGMLVGQAAKSFALW 265
>TIGR_CMR|CJE_0454 [details] [associations]
symbol:CJE_0454 "shikimate 5-dehydrogenase" species:195099
"Campylobacter jejuni RM1221" [GO:0004764 "shikimate
3-dehydrogenase (NADP+) activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00222
InterPro:IPR011342 InterPro:IPR013708 InterPro:IPR022893
Pfam:PF08501 UniPathway:UPA00053 InterPro:IPR016040
InterPro:IPR006151 Pfam:PF01488 Gene3D:3.40.50.720 GO:GO:0050661
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG0169
GO:GO:0004764 GO:GO:0009073 GO:GO:0009423 HOGENOM:HOG000237875
KO:K00014 GO:GO:0019632 TIGRFAMs:TIGR00507 ProtClustDB:PRK00258
RefSeq:YP_178473.1 ProteinModelPortal:Q5HW62 STRING:Q5HW62
GeneID:3231216 KEGG:cjr:CJE0454 PATRIC:20042608 OMA:YLYKDLQ
BioCyc:CJEJ195099:GJC0-459-MONOMER Uniprot:Q5HW62
Length = 262
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K +I P+ HSK P +HN + + + IY + + + +G ++ P
Sbjct: 2 KFLAVIGDPISHSKSPRMHNNAIKALGLDSIYTRYHLRNANCLREDFFKLGLSGANITLP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+KE + D A+ I + NT+ + + K+ YNTD + AI+D
Sbjct: 62 FKEKALDIADVKDDFARNIGSANTLCLK--EDKIYAYNTDALGFLEAIKD 109
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 519 505 0.00086 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 607 (65 KB)
Total size of DFA: 262 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.87u 0.11s 37.98t Elapsed: 00:00:02
Total cpu time: 37.88u 0.11s 37.99t Elapsed: 00:00:02
Start: Mon May 20 16:26:32 2013 End: Mon May 20 16:26:34 2013