BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010050
(519 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225451144|ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204989|emb|CBI34296.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/519 (74%), Positives = 444/519 (85%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
M V + K TMIC PLM QSVEQ++ +M++AK EGAD+VE+RLD INNF P +DLEIIL
Sbjct: 1 MDDVGVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIIL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPKW GG YEGDEH RLEALHLAE LGADY+DFELKVAS+ LGKQ
Sbjct: 61 RNKPLPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQ 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
S +R IVSC +D TP EDL V+ +Q+TGAD+IKLV + +ITEI +IF LLSHCQ
Sbjct: 121 HSSSRTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
+P+IAYS+G+RG +SQ+L KF G LVYGS++G+PV GLPT+ESLR+ YKV++IN DTKV
Sbjct: 181 MPLIAYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGLISKPVGHSKGPILHNP FRHVNYNGIYVPM VDDLK+FFS YSSPDFAGFSVG PYK
Sbjct: 241 FGLISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV FCDE+HPLAQ+I AVNTI+RRPSDGKLIGYNTDCEASITAIEDA++ERG NG A
Sbjct: 301 EAVTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEA 360
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
SPL G+ FVL GAGGAGRALAFGA+SRGA++VIFD+DF+RA SLA V G + +ED
Sbjct: 361 PLNSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFDRANSLAHAVSGEVKLYED 420
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ NFQPEKGAILANATP+GMHPNTDR+PV+EETL DYQLVFD+VYTPRKTRLLK+AEAAG
Sbjct: 421 VANFQPEKGAILANATPVGMHPNTDRIPVAEETLSDYQLVFDSVYTPRKTRLLKEAEAAG 480
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AIIVSGVEMFLRQAIGQFNLFTG EAP+EFMREI+L+KF
Sbjct: 481 AIIVSGVEMFLRQAIGQFNLFTGGEAPEEFMREIILSKF 519
>gi|255542470|ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548259|gb|EEF49750.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 519
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/519 (73%), Positives = 451/519 (86%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG V ++ M+C PLMAQSVEQ++S+MY AK +GADVVE+RLD I+NFQP +DL+ IL
Sbjct: 1 MGSVGELTSSVMVCTPLMAQSVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAIL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPK GGLYEGDE RLEAL LA LGADYVDFELKVAS+++G+ +H
Sbjct: 61 RNKPLPVIIVYRPKSEGGLYEGDEPTRLEALRLAYVLGADYVDFELKVASDLIGELKGTH 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+G++ IVSC ++ + P++E+L LV+ MQATGADIIKLV + N+ITE+ RIF L+ HCQ
Sbjct: 121 HTGSKVIVSCYVNGDMPTKENLSQLVASMQATGADIIKLVSTANNITELDRIFHLILHCQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
VPIIAYSVGERGL+SQLLSPKF G+L+YGS++G+ + GLPT++SLR+ YKV +IN+DTKV
Sbjct: 181 VPIIAYSVGERGLISQLLSPKFGGSLLYGSMEGSSIPGLPTLDSLREAYKVAYINSDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGL+SKPV HSKGP+LHNPTFRH NYNG YVPMFVDDLK+FFS YSSPDFAGFSVGFPYK
Sbjct: 241 FGLVSKPVSHSKGPLLHNPTFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVGFPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV++FCDEVHPLA++I AVNTIIRRP DGKLIG+NTDCEA+ITAIEDA+KE+GY +G
Sbjct: 301 EAVVEFCDEVHPLAKSIGAVNTIIRRPGDGKLIGHNTDCEAAITAIEDALKEQGYMDGRT 360
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
S SPL GR FVL GAGGAGRALAFGAKSRGAR+VIFDID ERAK LA V G A+ FE+
Sbjct: 361 SSNSPLTGRQFVLVGAGGAGRALAFGAKSRGARIVIFDIDLERAKFLADAVSGEAQLFEN 420
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
++NF+PE GAILANATP+GMHPNT+R+PV+E TL YQLVFDAVYTPRKTRLLK+AEAAG
Sbjct: 421 VVNFEPENGAILANATPIGMHPNTERIPVAEATLGIYQLVFDAVYTPRKTRLLKEAEAAG 480
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AIIVSGVEMFLRQA+GQF+LFTG+EAP EFMREIVLAKF
Sbjct: 481 AIIVSGVEMFLRQAMGQFSLFTGREAPTEFMREIVLAKF 519
>gi|224130894|ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222838117|gb|EEE76482.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/519 (73%), Positives = 448/519 (86%), Gaps = 1/519 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG V + N+ M+CAPLMAQSVEQ++ +M+ AKA+GADVVE+RLDCI+ FQP +DLE I+
Sbjct: 1 MGSVGVLTNSVMVCAPLMAQSVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETII 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPKW GG YEGDEH+RLEAL LA DLGADY+D ELKVAS ++ + + H
Sbjct: 61 RNKPLPVIIVYRPKWEGGQYEGDEHRRLEALRLANDLGADYIDLELKVASELIWELKNKH 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
Q+G + IVS L+ TPS+E+L +LV+ MQAT ADIIK+V + +DITE+ RIF LLSHC+
Sbjct: 121 QNGGKVIVSSYLNGATPSKENLSHLVATMQATEADIIKVVSNADDITEMERIFHLLSHCE 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
VP +AYSVGERGL+SQLL PKF GALVYGS++G + GLPT++SLR+ YKV+ IN+DTKV
Sbjct: 181 VPAVAYSVGERGLISQLLCPKFGGALVYGSMEGNSIPGLPTLDSLREAYKVDCINSDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGL+SKPVGHSKGP+LHNPT RHVN+NGIYVPMFVDDLKKFF Y+SPDFAG+SVGFPYK
Sbjct: 241 FGLVSKPVGHSKGPLLHNPTLRHVNFNGIYVPMFVDDLKKFFDVYASPDFAGYSVGFPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV++FCDEVHPLA+ I AVNTIIRRP DGKLIGYNTDCE SITAIEDA++++ Y NG
Sbjct: 301 EAVVQFCDEVHPLAKCIGAVNTIIRRPCDGKLIGYNTDCEGSITAIEDALRDQKYVNGR- 359
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
S SPLAG+ FV+ GAGGAGRA+A GAKSRGAR++IFDID ERAKSLA V G A+ FE
Sbjct: 360 SLNSPLAGKQFVVVGAGGAGRAIAVGAKSRGARLIIFDIDLERAKSLARAVSGEAQHFES 419
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ +FQPE GAILANATP+GMHP+TDR+P +EETL +YQLVFDAVYTPRKTRLLKDA+AAG
Sbjct: 420 LAHFQPENGAILANATPIGMHPSTDRIPAAEETLGNYQLVFDAVYTPRKTRLLKDADAAG 479
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AI VSGVEMFLRQAIGQFNLFTG+EAPK+FMREIVLAKF
Sbjct: 480 AITVSGVEMFLRQAIGQFNLFTGREAPKDFMREIVLAKF 518
>gi|224125426|ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857959|gb|EEE95506.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 518
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/519 (71%), Positives = 446/519 (85%), Gaps = 1/519 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG I N+TM+CAPLMA+SVEQ++ +M A+A+GAD VE+RLD IN+FQP +DLE I+
Sbjct: 1 MGRAGILANSTMVCAPLMARSVEQMVIDMQSAEAQGADAVEVRLDYINSFQPSQDLETII 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRP+W GG YEGDEH RLEAL LA +LGADY+D ELKVAS+++ + + H
Sbjct: 61 RNKPLPVIIVYRPRWEGGQYEGDEHTRLEALRLAHELGADYIDVELKVASDLVREVKNKH 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
Q+G + IVS L TPS+EDL +LV+ MQAT ADIIK+V + NDITE+ RIF LLSH Q
Sbjct: 121 QTGGKVIVSSYLSGATPSKEDLSHLVASMQATKADIIKVVSNANDITELDRIFHLLSHMQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
VP +AYS+GERGL+SQLL PKF GALVYG+++G + GLPT++SLR+ YKVE+IN+DTKV
Sbjct: 181 VPAVAYSLGERGLISQLLCPKFGGALVYGAMEGNSIPGLPTLDSLREAYKVENINSDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGL+SKPV HSKGPILHNP FRH N+NGIYVPMFVDDLK+FF Y+SPDFAG+SVGFPYK
Sbjct: 241 FGLVSKPVSHSKGPILHNPAFRHANFNGIYVPMFVDDLKEFFEVYASPDFAGYSVGFPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV++FCDEVHPLA++I AVNTIIR+PSDGKLIGYNTDCE SI +IEDA+K++ Y NG A
Sbjct: 301 EAVVQFCDEVHPLAKSIGAVNTIIRKPSDGKLIGYNTDCEGSIASIEDALKDQRYING-A 359
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
S SPLAG+ FV+ GAGGAGRA+A GAKSRGARV+IFDID +RAKSLA V G A+ F+
Sbjct: 360 SLNSPLAGKQFVVVGAGGAGRAIAVGAKSRGARVIIFDIDLDRAKSLAQVVSGEAQHFDS 419
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ +FQPEKGAILANATP+GMHP+TDR+PV+E TL +YQLVFDAVYTPRKTRLL+DA+AAG
Sbjct: 420 LAHFQPEKGAILANATPIGMHPSTDRIPVAEATLGNYQLVFDAVYTPRKTRLLEDADAAG 479
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AI VSGVEMFL+QAIGQF+LFTG+EAPK+FMREIVLAKF
Sbjct: 480 AITVSGVEMFLKQAIGQFSLFTGREAPKDFMREIVLAKF 518
>gi|147837952|emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
Length = 1071
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/527 (71%), Positives = 430/527 (81%), Gaps = 21/527 (3%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
M V + K TMIC PLM QSVEQ++ +M++AK EGAD+VE+RLD INNF P +DLEIIL
Sbjct: 1 MDDVGVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIIL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
KPLPV+IVYRPKW GG YEGDEH RLEALHLAE LGADY+DFELKVAS+ LGKQ
Sbjct: 61 RNKPLPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQ 120
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
S +R IVSC +D TP EDL V+ +Q+TGAD+IKLV + +ITEI +IF LLSHCQ
Sbjct: 121 HSSSRTIVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQ 180
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV 240
+P+IAYS+G+RG +SQ+L KF G LVYGS++G+PV GLPT+ESLR+ YKV++IN DTKV
Sbjct: 181 MPLIAYSIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKV 240
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FGLISKPVGHSKGPILHNP FRHVNYNGIYVPM VDDLK+FFS YSSPDFAGFSVG PYK
Sbjct: 241 FGLISKPVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYK 300
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EAV FCDE+HPLAQ+I AVNTI+RRPSDGKLIGYNTDCEASITAIEDA++ERG NG A
Sbjct: 301 EAVTGFCDELHPLAQSIGAVNTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEA 360
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE------------------ 402
SPL G+ FVL GAGGAGRALAFGA+SRGA++VIFD+DFE
Sbjct: 361 PLNSPLTGKQFVLVGAGGAGRALAFGARSRGAQLVIFDLDFEKSIPGRITALLSNLHCSS 420
Query: 403 ---RAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
RA SLA V G + +ED+ NFQPEKGAILANATP+GMHPNTDR+PV+EETL DYQL
Sbjct: 421 PKDRANSLAHAVSGEVKLYEDVANFQPEKGAILANATPVGMHPNTDRIPVAEETLSDYQL 480
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA 506
VFD+VYTPRKTRLLK+AEAAGAIIVSGVEMFLRQAIGQFNLFTG E
Sbjct: 481 VFDSVYTPRKTRLLKEAEAAGAIIVSGVEMFLRQAIGQFNLFTGGEG 527
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/517 (50%), Positives = 351/517 (67%), Gaps = 8/517 (1%)
Query: 3 VVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK 62
V + N T +C PLM +VEQ+L+ M +AK GAD+VEIRLDC+ NF P +DL+I++ +
Sbjct: 555 VSGVRSNPTFLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQ 614
Query: 63 KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS 122
PLP L+ YRP W GG YEGDE+KR +AL LA +LGA Y+D EL+VA Y
Sbjct: 615 SPLPTLVTYRPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQ 674
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
+ IVS + TPS E +G LV+R+QA+GADI+K+ + DIT++AR+ Q+ H QVP
Sbjct: 675 NFKVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVP 734
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
IA +GERGL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV
Sbjct: 735 TIAIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKV 794
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPY 299
+G+I KPVGHSK P+L N F+ V N +YV + VDD++KFF+TYS+PDF +G S P+
Sbjct: 795 YGIIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPH 854
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KE +K D + P+A+ I A+N I+R+P DGKL +NTD +I AIED ++E NG+
Sbjct: 855 KEVAIKCMDTIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRE---SNGS 910
Query: 360 A-SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
+ + GSPLAG++FV+ GAGGAG++LA+GAK +GARVV+ + FERAK LA V G A
Sbjct: 911 SPAVGSPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTL 970
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
+I NF PE+G ILAN T +GM P + P+ + L+ Y LVFDA+YTP+ TRLL++A+
Sbjct: 971 AEIENFHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKE 1030
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+G IIV G EM +RQ Q+ FTG AP+E RE++
Sbjct: 1031 SGKIIVYGTEMLIRQGFEQYKNFTGLPAPEELFRELM 1067
>gi|356504076|ref|XP_003520825.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 524
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/524 (71%), Positives = 437/524 (83%), Gaps = 5/524 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQ---SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLE 57
MG + K++ M+CA + S EQ+++ M+QAKAEGAD+VE+RLDCI NF DL+
Sbjct: 1 MGSNQVWKHSVMVCAAITTHQYVSAEQIVNGMHQAKAEGADIVELRLDCITNFHSHHDLK 60
Query: 58 IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGK 115
IIL KPLPVLIV RPKW GGLYEGDE+KRLEAL LA +L AD++D ELK AS + L +
Sbjct: 61 IILQNKPLPVLIVNRPKWEGGLYEGDENKRLEALQLAVELSADFIDVELKAASCLPTLVE 120
Query: 116 QYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL 175
+H S + IVSC +D TP E L LV MQATGADIIKLV DITEI RIF L
Sbjct: 121 HMRNHNSHGKIIVSCYVDGTTPPHEVLLQLVELMQATGADIIKLVTLAADITEIKRIFSL 180
Query: 176 LSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
+CQVP+IAYSVGERGL+SQLLSPKF G VYGSL G P+ GLP+++S+++ YK+EH+N
Sbjct: 181 FLYCQVPLIAYSVGERGLISQLLSPKFGGFFVYGSLAGNPIPGLPSLDSIQEAYKLEHVN 240
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 295
ADTKVFGLISKPV HS+GPILHNP+F+ VNYNGIYVPMFVDDLKKFFSTY SPDF+GFSV
Sbjct: 241 ADTKVFGLISKPVSHSRGPILHNPSFKDVNYNGIYVPMFVDDLKKFFSTYPSPDFSGFSV 300
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
G PYKE V++FCDEVHPLAQ+I AVNTIIRRP DGKL+GYNTDCEA+ITAIEDA+ E G
Sbjct: 301 GIPYKEEVLRFCDEVHPLAQSIGAVNTIIRRPRDGKLVGYNTDCEAAITAIEDALIEHGC 360
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+G AS GSPLAGR+FVL GAGGAG+ALAFGAKSRGAR+VIFDIDF+RAKSLA V G A
Sbjct: 361 NDGEASLGSPLAGRLFVLVGAGGAGKALAFGAKSRGARLVIFDIDFDRAKSLACAVFGEA 420
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+PF++++NFQPEKGAILANATP+GMHPNTDR+PV+E TL DY+LVFDAVYTPR+TRLL +
Sbjct: 421 QPFKELVNFQPEKGAILANATPVGMHPNTDRIPVAEATLEDYRLVFDAVYTPRRTRLLNE 480
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
A+AAGAI V+GVEMFLRQAIGQFNLFTG EAP+EFMREIVL+KF
Sbjct: 481 ADAAGAITVAGVEMFLRQAIGQFNLFTGLEAPEEFMREIVLSKF 524
>gi|57920902|gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
[Nicotiana tabacum]
Length = 521
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/522 (69%), Positives = 430/522 (82%), Gaps = 4/522 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG V + KN+ M+CAPLMA SVEQ++ M QAKA+GAD+VEIRLD INNFQP KDL+++L
Sbjct: 1 MGSVGLLKNSAMVCAPLMAPSVEQLVHGMLQAKAQGADLVEIRLDGINNFQPQKDLQVLL 60
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDE---HKRLEALHLAEDLGADYVDFELKVASNILGKQY 117
PLPVLIVYRP W G +E D+ HK+LE L A++LGADY++ +LK+AS+ K+
Sbjct: 61 NNNPLPVLIVYRPIWEGNEFEEDDDHIHKQLEVLRWAKELGADYIELDLKIASDFTKKEK 120
Query: 118 SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS 177
SG + I SC +D T S+EDL +V+ MQ+TGADI+K+V + NDITE+ ++F LLS
Sbjct: 121 PRWSSGCKVIASCFVDNVT-SKEDLSQVVAHMQSTGADILKIVTNANDITELEKMFHLLS 179
Query: 178 HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD 237
HCQVP+IAYS+GERGL+SQLL PKF LVYGSL V GLPT+ SLRQ Y V+ ++ D
Sbjct: 180 HCQVPLIAYSLGERGLISQLLGPKFGSVLVYGSLDCNAVPGLPTLGSLRQAYGVDFMDTD 239
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
TKVFGLISKPVGHSKGPILHNPTFRHV YNGIYVPMFVDDLK+FF YSSPDFAGFSVG
Sbjct: 240 TKVFGLISKPVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGI 299
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
PYKEAV+ FCDEV PLA++I AVNTII+RP DGKLIGYNTDCEASITAIEDA+K G N
Sbjct: 300 PYKEAVVSFCDEVDPLAKSIGAVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGLTN 359
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
G A SPLAG++FVL GAGGAGRALAFGAKSR A +VIFDIDF+RAK+LA+ V G A P
Sbjct: 360 GAAFLPSPLAGKLFVLVGAGGAGRALAFGAKSRRAEIVIFDIDFDRAKALAAAVSGEALP 419
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
FE++ +FQPEKGAILANATP+GMHPN DR+PVSE +L+DY +VFDAVYTPRKT LLKDAE
Sbjct: 420 FENLASFQPEKGAILANATPIGMHPNKDRIPVSEASLKDYVVVFDAVYTPRKTTLLKDAE 479
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AAGAI VSGVEMFLRQAIGQF+LFT +AP+EFMR+IV+AKF
Sbjct: 480 AAGAITVSGVEMFLRQAIGQFHLFTRTKAPEEFMRDIVMAKF 521
>gi|356573042|ref|XP_003554674.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 524
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/524 (66%), Positives = 421/524 (80%), Gaps = 5/524 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQ---SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLE 57
MG K++ M+CAP+ Q SVEQ+ ++MYQAKAE AD+VE+RLDCI NF P +L+
Sbjct: 1 MGSNQDWKHSVMVCAPITTQQSVSVEQIANDMYQAKAEDADIVEVRLDCITNFHPXHELK 60
Query: 58 IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGK 115
IL KPLPVLIV +PKW GGLYEGDE+ +LEAL LA +LGAD+++ +LK AS + L +
Sbjct: 61 TILQNKPLPVLIVNQPKWEGGLYEGDENMQLEALQLAVELGADFIEVQLKAASCLPTLVE 120
Query: 116 QYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL 175
+H S + IVSC +D P +E+L LV MQ T ADIIKLV DITEI +IF L
Sbjct: 121 HKRNHNSHGKIIVSCYVDGIIPPQEELLQLVELMQGTEADIIKLVTHAADITEIIKIFSL 180
Query: 176 LSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
+CQVP+IAYSVGERGL+SQLLS KF G VY SL G P+ GLP+++++++ YK+EH+
Sbjct: 181 FPYCQVPLIAYSVGERGLISQLLSQKFGGFFVYESLAGNPIPGLPSLDNIQEAYKLEHVK 240
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 295
ADTKVFGLISKP+ HSKGPILHNP FRH+NYNGIYVPMFVDDLK+FF+TY PDF+GF V
Sbjct: 241 ADTKVFGLISKPISHSKGPILHNPPFRHINYNGIYVPMFVDDLKEFFNTYPCPDFSGFIV 300
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
G PYKE +++FCDEVHPLAQ+I AVNTIIRR GKL+GYNT CEA+ITAIEDA+ E G
Sbjct: 301 GIPYKEEILRFCDEVHPLAQSIGAVNTIIRRARHGKLVGYNTHCEAAITAIEDALIEHGC 360
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+G AS GSPLAGR+FVL GAGGAG ALAFG+KSRGA +VIFDI+F+RAKSLA V G A
Sbjct: 361 NDGGASLGSPLAGRLFVLVGAGGAGIALAFGSKSRGALLVIFDINFDRAKSLACAVFGEA 420
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+PF++++NFQPEK AILANATP+GM PNTDR+PV+E TL D +LVFDAVY R+TRLLK+
Sbjct: 421 QPFKELVNFQPEKEAILANATPVGMLPNTDRIPVAEATLEDXRLVFDAVYRLRRTRLLKE 480
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
A+AAGAI V GVEMFLRQAIGQFNLFT EAP+EFMREIVL+KF
Sbjct: 481 ADAAGAITVGGVEMFLRQAIGQFNLFTSLEAPEEFMREIVLSKF 524
>gi|255559348|ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223540079|gb|EEF41656.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 515
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/513 (58%), Positives = 392/513 (76%), Gaps = 2/513 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N ++C PL ++ ++LS M +A+ EGAD+VE+R+D ++ F +E ++ + LP
Sbjct: 4 QNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMS-FSHISQVEKLIKLRTLPA 62
Query: 68 LIVYRPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
++ +RPK + GD K L+ L LA DL ++V+ E +VAS++ +Y ++S +
Sbjct: 63 IVSFRPKTSKISSNGDSKKTCLQVLSLALDLDVEFVEMEYEVASDVSMAEYIYNRSSGKL 122
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS ++ PS E LG L++ +Q+TGAD+IKLV +V+ IT++A +F++L+HCQVP+IA
Sbjct: 123 IVSSYVNGGKPSAEKLGNLIANLQSTGADVIKLVINVDYITDLAPVFKMLAHCQVPLIAL 182
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
+VG RGL+SQLL PKF G LVYGSL+ V G+PT+ SLR YK+E+IN+DTKVFGLIS
Sbjct: 183 AVGSRGLISQLLGPKFGGFLVYGSLRDKAVPGMPTLFSLRHVYKLEYINSDTKVFGLISN 242
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
PVGHSKGPILHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+KEA +
Sbjct: 243 PVGHSKGPILHNPAFRHTGYNGIYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAAVSC 302
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
CDEVHPLA++I AVNTI+RRP+DGKL+GYNTDCEASITAIEDA++ER N A SPL
Sbjct: 303 CDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCEASITAIEDALRERRPTNRGALDTSPL 362
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
AG+ FVL GAGGAGRALAFGA SRGARVV+F+ +FERAKSLA+ V G A P++ + FQ
Sbjct: 363 AGKTFVLIGAGGAGRALAFGASSRGARVVVFNRNFERAKSLANAVSGEALPYKALDRFQR 422
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
E ILANA+ +GM PNT + PVS+E L+ Y+LVFDAVYTPR TRLL++A+ GA++VSG
Sbjct: 423 ENDMILANASAVGMEPNTHQSPVSKEALKSYELVFDAVYTPRNTRLLQEAKEVGAVVVSG 482
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
VEMF+RQA+GQF LFTG AP+ FMR++VL +F
Sbjct: 483 VEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF 515
>gi|116787099|gb|ABK24375.1| unknown [Picea sitchensis]
Length = 514
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 294/519 (56%), Positives = 380/519 (73%), Gaps = 10/519 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ +N ++C+PLMA++VE++LS M AK GAD +EIRLDC+N + DLE +L + L
Sbjct: 1 MAQNGFLVCSPLMAETVEEMLSQMQHAKDVGADCIEIRLDCLNGYAT-TDLEQLLKARVL 59
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P ++ YR K GG YE DE KRL+ L LA +LGAD++D EL+VA + + + S +
Sbjct: 60 PTIVTYRLKSEGGKYEVDEKKRLDTLRLAHELGADFIDVELQVAFDFVSRIKDKKSSNCK 119
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS ++ TPS EDL +LV MQ+TGADI+K+V + +IT+++R+FQL+ HCQVPIIA
Sbjct: 120 IIVSNHISGRTPSTEDLSHLVVNMQSTGADILKIVTTATNITDVSRVFQLIPHCQVPIIA 179
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVF 241
G+RGL+SQLL PKF G L+YGS+ TP G P + L YK+ +N+DTKVF
Sbjct: 180 CVTGDRGLISQLLGPKFGGYLIYGSIGSGKDSTP--GQPKLADLTGHYKIGRLNSDTKVF 237
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G+I+ PVGHSKGPILHN FR +NG+YVP+ VD+L F YS+PDFAGFSVG P+KE
Sbjct: 238 GVIANPVGHSKGPILHNQAFRDAGFNGVYVPLLVDNLADFLKVYSAPDFAGFSVGIPHKE 297
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTA 360
A + CDEV PLAQ+I AVNTI+RR SDGKLIGYNTDCE +I+AIED +K E G N +
Sbjct: 298 AAVTCCDEVQPLAQSIGAVNTIVRRQSDGKLIGYNTDCEGAISAIEDGLKGETGSINSGS 357
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
S SPLAGR FVL GAGGAGRALAFGAK RGA V+I + ++ERAKSLA+ V G A E
Sbjct: 358 S--SPLAGRTFVLVGAGGAGRALAFGAKQRGAHVIIANRNYERAKSLANSVGGEAIAVEQ 415
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ +F+PE GA+LAN + +GM PN + P+S+E L Y LVFDAVYTPR+TRLL++A+ AG
Sbjct: 416 LNSFRPETGAVLANTSAVGMQPNVNATPLSKEALGAYTLVFDAVYTPRETRLLREAKEAG 475
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
I+VSG+EMF+RQAIGQ+ LFTGK AP E +R+IV+ F
Sbjct: 476 KIVVSGLEMFIRQAIGQYELFTGKPAPTELIRKIVMKDF 514
>gi|224128592|ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222861143|gb|EEE98685.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 504
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 287/513 (55%), Positives = 385/513 (75%), Gaps = 13/513 (2%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN ++C PL ++ ++LS+M +A+ EGAD+ E+RLD ++ F ++E ++ ++ LP
Sbjct: 4 KNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLS-FSHNSEVEKLIKQRTLPS 62
Query: 68 LIVYRPKWAGGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
++ +R + + D L+ L LA DL ++V+ + +VAS +Y ++S T+
Sbjct: 63 IVSFRLEPSRISSNKDRKNTCLQVLRLAFDLNVEFVEMDYEVASEDDMAEYVYNRSNTKL 122
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS ++ PS E+LGYL++ MQ+TGAD++KLV V IT++A +F +L+HCQ+P+IA
Sbjct: 123 IVSSYVNGRKPSAEELGYLIACMQSTGADVLKLVLDVEKITDLAPVFTMLTHCQIPLIAL 182
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
+VG RGL+SQLL PKF G LVYGSL V G+PT+ SLRQ YK+E+INADTKVFGLIS
Sbjct: 183 AVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGLISN 242
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
PVGHSKGP+LHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+KEA +
Sbjct: 243 PVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGC 302
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
CDEVHPLA++I AVNTI+RRP+DGKL+GYNTDC+ASI+AIEDA+ SPL
Sbjct: 303 CDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDALT-----------ASPL 351
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
+G+ FVL GAGGAGRALAFGAKSRGARV+IF+ ++ERA++LA V G A P+E + F+P
Sbjct: 352 SGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEALPYESLDRFRP 411
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
G ILANA+ +GM PN+D+ PVS+E L+ +LVFDAVYTPR TRLL++A+ GA++VSG
Sbjct: 412 VNGMILANASAIGMEPNSDQSPVSKEILKACELVFDAVYTPRNTRLLREAKEVGAVVVSG 471
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
VEMF+RQA+GQF LFTG AP+ FMR++VL +F
Sbjct: 472 VEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF 504
>gi|148906893|gb|ABR16592.1| unknown [Picea sitchensis]
gi|148907829|gb|ABR17039.1| unknown [Picea sitchensis]
Length = 518
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/511 (54%), Positives = 375/511 (73%), Gaps = 3/511 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N ++C PL+ QS+E++LS M A+ GAD VE+R+D + NF P DL+ +L + +P
Sbjct: 6 QNDCLLCIPLVGQSMEEMLSQMELARIHGADCVELRIDHVRNFNPRVDLDTLLKARTMPA 65
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
++ YRPKW GG YEGDE KRL+ L LA +LGADY+D EL+VAS+ + + + ++ I
Sbjct: 66 IVTYRPKWEGGAYEGDEGKRLDVLRLAMELGADYIDVELQVASDFIKSISNKKRENSKII 125
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS EDLG LV+R+Q+TGADI+K+ + DIT++ARIF++L++CQVPI+A
Sbjct: 126 VSNHNYQFTPSLEDLGLLVARIQSTGADIVKIATTATDITDVARIFRVLAYCQVPILALV 185
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S+LL PKF G L +GSL+ G T+ + YK+ + DTKVFGLI
Sbjct: 186 MSERGLISRLLCPKFGGYLTFGSLEAGKESAPGQATLADMLNIYKIRGLGRDTKVFGLIG 245
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
PV HSKGP LHN F + ++ IYVP VDD+K+F YSSPDFAGFSV P+KEA ++
Sbjct: 246 NPVSHSKGPTLHNRAFGEIGFDAIYVPFLVDDIKEFLKVYSSPDFAGFSVTIPHKEAALE 305
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV P+A++I AVNTI+RR SDGKLIGYNTD +I+AIEDA+K + + G + SP
Sbjct: 306 CCDEVDPIARSIGAVNTIVRRQSDGKLIGYNTDSVGAISAIEDALKGK-HNYGDWTHSSP 364
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LAG++F++ GAGGAG+ALAFGAK +GARVVI + ++ERAK+LA V G A P + + +F+
Sbjct: 365 LAGKLFLIVGAGGAGKALAFGAKQKGARVVIANRNYERAKALAIQVEGEAIPLDKLDHFR 424
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE G ILAN T +GMHPN + P+S+E L Y +VFDAVYTP+ TRLL+DAEA GA++V
Sbjct: 425 PETGMILANTTSMGMHPNVSQTPISKEALSSYAVVFDAVYTPKWTRLLQDAEATGALVVC 484
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G+EMF+RQA+GQF LFTG +AP++ MREIVL
Sbjct: 485 GLEMFIRQAMGQFELFTGCKAPEKLMREIVL 515
>gi|302817344|ref|XP_002990348.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
gi|300141910|gb|EFJ08617.1| hypothetical protein SELMODRAFT_269650 [Selaginella moellendorffii]
Length = 536
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 281/515 (54%), Positives = 370/515 (71%), Gaps = 13/515 (2%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N TM+CAPL+A+SVE++L + AKA GADVVE+R+D IN+FQP DL ++ + LPV
Sbjct: 23 QNGTMLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPRVDLPRLIEGRVLPV 82
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG-TRF 126
+I YRP W GGLYEGDE R+ AL LA +L AD++D EL+VA + + Q S S TR
Sbjct: 83 IITYRPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRI 142
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VP 182
IVS + TPS E++G LV+RMQATGADIIK V + N++ + A +F++L+H Q VP
Sbjct: 143 IVSNHNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQLSLKVP 202
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKV 240
IA +G++GL+S+LLSPKF G L +G+L G PT+ L +TY++ ++ DT+V
Sbjct: 203 TIALVMGQKGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRV 262
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+G+I PVGHSKGP LHNP F + YN +Y+P VD+L +F S YS+PDF GFSV P+K
Sbjct: 263 YGIIGNPVGHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFK 322
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E +K CDEV A+AI AVNTIIRR +DGK +GYNTDCEA+I+AIED ++E GY
Sbjct: 323 EDALKCCDEVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVRESGYHGS-- 379
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
PL+G++ V+ GAGGAG+ALAFGAK RGARVVI + +FERAK LA V A E
Sbjct: 380 ---QPLSGKLCVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAISLET 436
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ +FQPE G ILAN+T +GM PN P+ + L+ Y +VFDAVYTP +TRLL++A+ +G
Sbjct: 437 LSSFQPENGMILANSTSVGMQPNVQDTPIPKAALKGYSVVFDAVYTPLETRLLREAKESG 496
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
A++VSG+EMF+RQAIGQF LFTG+ APK MREIV
Sbjct: 497 AVVVSGLEMFIRQAIGQFELFTGQPAPKSVMREIV 531
>gi|302795227|ref|XP_002979377.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
gi|300153145|gb|EFJ19785.1| hypothetical protein SELMODRAFT_233322 [Selaginella moellendorffii]
Length = 498
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 279/507 (55%), Positives = 365/507 (71%), Gaps = 17/507 (3%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
M+CAPL+A+SVE++L + AKA GADVVE+R+D IN+FQPG DL ++ + LPV+I Y
Sbjct: 1 MLCAPLVAESVEEMLHQIKAAKASGADVVELRVDYINSFQPGVDLPRLIEGRVLPVIITY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG-TRFIVSC 130
RP W GGLYEGDE R+ AL LA +L AD++D EL+VA + + Q S S TR IVS
Sbjct: 61 RPNWEGGLYEGDEAARVAALSLAIELQADFIDVELQVAEDFIASQSSKRSSSSTRIIVSN 120
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++G LV+RMQATGADIIK V + N++ + A +F++L+H QVP IA +G+
Sbjct: 121 HNYHTTPSSEEIGRLVARMQATGADIIKFVTTANNVVDSANVFRVLAHTQVPTIALVMGQ 180
Query: 191 RGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S+LLSPKF G L +G+L G PT+ L +TY++ ++ DT+V+G+I PV
Sbjct: 181 KGLISRLLSPKFGGFLTFGTLSSGKESAPGQPTLTDLVRTYRLREMDCDTRVYGIIGNPV 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
GHSKGP LHNP F + YN +Y+P VD+L +F S YS+PDF GFSV P+KE +K CD
Sbjct: 241 GHSKGPYLHNPAFEAIGYNAVYLPFLVDNLAEFLSVYSAPDFGGFSVTIPFKEDALKCCD 300
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV A+AI AVNTIIRR +DGK +GYNTDCEA+I+AIED ++E GY PL+G
Sbjct: 301 EVESSAKAIGAVNTIIRR-ADGKFVGYNTDCEAAISAIEDGVRESGYHG-----SQPLSG 354
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
++ V+ GAGGAG+ALAFGAK RGARVVI + +FERAK LA V A E + +FQPE
Sbjct: 355 KLCVVIGAGGAGKALAFGAKHRGARVVIANRNFERAKVLAESVGAEAISLETLSSFQPET 414
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILAN+T +GM PN L+ Y +VFDAVYTP +TRLL++A+ +GA++VSG+E
Sbjct: 415 GMILANSTSVGMQPNA--------ALKGYSVVFDAVYTPLETRLLREAKESGAVVVSGLE 466
Query: 489 MFLRQAIGQFNLFTGKEAPKEFMREIV 515
MF+RQAIGQF LFTG+ APK MREIV
Sbjct: 467 MFIRQAIGQFELFTGQPAPKSVMREIV 493
>gi|147837950|emb|CAN60561.1| hypothetical protein VITISV_034024 [Vitis vinifera]
Length = 531
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/511 (52%), Positives = 358/511 (70%), Gaps = 5/511 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 21 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + I
Sbjct: 81 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGKVKII 140
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I +
Sbjct: 141 VSSHNYQNTPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIA 200
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I
Sbjct: 201 MAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIG 260
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KP+GHSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++
Sbjct: 261 KPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLR 320
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDE+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSP
Sbjct: 321 CCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSP 377
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LAG++FV+ GAGGAG+ALA+G K +GARVV+ + FE+AK LAS V G A ++ NF
Sbjct: 378 LAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMTLAELENFH 437
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE G ILAN T +GM PN D P+S++ L Y LVFDA+YTP+ TRLL++A+ +GAIIV
Sbjct: 438 PEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQESGAIIVY 497
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G EMF+ QA QF FTG APKE +RE+++
Sbjct: 498 GTEMFINQAFVQFERFTGLPAPKELIREVLV 528
>gi|225451148|ref|XP_002270232.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 531
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/511 (52%), Positives = 358/511 (70%), Gaps = 5/511 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 21 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + I
Sbjct: 81 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGNVKII 140
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + +PS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I +
Sbjct: 141 VSSHNYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIA 200
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I
Sbjct: 201 MAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIG 260
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KP+GHSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++
Sbjct: 261 KPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLR 320
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDE+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSP
Sbjct: 321 CCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSP 377
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LAG++FV+ GAGGAG+ALA+G K +GARVV+ + FE+AK LAS V G A ++ NF
Sbjct: 378 LAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMTLAELENFH 437
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE G ILAN T +GM PN D P+S++ L Y LVFDA+YTP+ TRLL++A+ +GAIIV
Sbjct: 438 PEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQESGAIIVY 497
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G EMF+ QA QF FTG APKE +RE+++
Sbjct: 498 GTEMFINQAFVQFERFTGLPAPKELIREVLV 528
>gi|58047529|gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
regia]
Length = 508
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/507 (52%), Positives = 357/507 (70%), Gaps = 4/507 (0%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++CAP+MA+SV++++ NM +AK AD+VEIRLD + +F P DL+ I+ PLP L
Sbjct: 1 TLVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFT 60
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRPKW GG Y+GDE KRL+AL LA + GADY+D EL+VA Y ++ IVS
Sbjct: 61 YRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSS 120
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TPS EDLG LV+R+QATGADI+K+ + +I ++ARIFQ+ H QVPII +GE
Sbjct: 121 HNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIVMGE 180
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RG +S++L PKF G L +G+++ V G PT++ L Y + I DTKVFG+I KPV
Sbjct: 181 RGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIGKPV 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HSK PIL+N F+ V +NG+Y+P+ VDD+ F TYSS DFAGFS P+KEA +K CD
Sbjct: 241 HHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEAALKCCD 300
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV P+A++I AVN IIRRP+DGKL+GYNTD +I+AIED + RG N + + SPLAG
Sbjct: 301 EVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGL--RGSHNSSNTADSPLAG 358
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
++FV+ GAGGAG+ALA+GAK +GARVVI + ++RA+ LA + G A D+ NF PE
Sbjct: 359 KLFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFHPED 418
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILAN+T +GM P D P+ + LR Y LVFDAVYTP+ TRLL++AE +GA IV+G+E
Sbjct: 419 GMILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVTGLE 478
Query: 489 MFLRQAIGQFNLFTGKEAPKEFMREIV 515
MF+ QA QF FTG APKE R+++
Sbjct: 479 MFIGQAYEQFERFTGLPAPKELFRKVM 505
>gi|298204991|emb|CBI34298.3| unnamed protein product [Vitis vinifera]
Length = 600
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/511 (52%), Positives = 358/511 (70%), Gaps = 5/511 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 90 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 149
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+VA + + I
Sbjct: 150 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGNVKII 209
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + +PS E+LG LV+R+QATGADI+K+ + DIT+ ARIFQ+L+H QVP I +
Sbjct: 210 VSSHNYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIA 269
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LS KF L +GSL+ V G PTV+ L Y I DTKV G+I
Sbjct: 270 MAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIG 329
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KP+GHSK P L+N F+ V +NGIY+P+ VD +K F +TYSSPDF G+S P+KE ++
Sbjct: 330 KPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLR 389
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDE+ P+AQAI A++ +IRRP+DGKL+GYN D +I AIE+ ++ NGT S GSP
Sbjct: 390 CCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRA---SNGTTSVGSP 446
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LAG++FV+ GAGGAG+ALA+G K +GARVV+ + FE+AK LAS V G A ++ NF
Sbjct: 447 LAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMTLAELENFH 506
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE G ILAN T +GM PN D P+S++ L Y LVFDA+YTP+ TRLL++A+ +GAIIV
Sbjct: 507 PEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQESGAIIVY 566
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G EMF+ QA QF FTG APKE +RE+++
Sbjct: 567 GTEMFINQAFVQFERFTGLPAPKELIREVLV 597
>gi|225451146|ref|XP_002270188.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic [Vitis vinifera]
gi|298204990|emb|CBI34297.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/517 (50%), Positives = 352/517 (68%), Gaps = 8/517 (1%)
Query: 3 VVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK 62
V + N T++C PLM +VEQ+L+ M +AK GAD+VEIRLDC+ NF P +DL+I++ +
Sbjct: 15 VSGVRSNPTLLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQ 74
Query: 63 KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS 122
PLP L+ YRP W GG YEGDE+KR +AL LA +LGA Y+D EL+VA Y
Sbjct: 75 SPLPTLVTYRPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQ 134
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
+ IVS + TPS E +G LV+R+QA+GADI+K+ + DIT++AR+ Q+ H QVP
Sbjct: 135 NFKVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVP 194
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
IA +GERGL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV
Sbjct: 195 TIAIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKV 254
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPY 299
+G+I KPVGHSK P+L N F+ V N +YV + VDD++KFF+TYS+PDF +G S P+
Sbjct: 255 YGIIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPH 314
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KE +K D + P+A+ I A+N I+R+P DGKL +NTD +I AIED ++E NG+
Sbjct: 315 KEVAIKCMDTIDPIARKIGAINNIVRKP-DGKLTAFNTDYIGAIEAIEDGLRE---SNGS 370
Query: 360 A-SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
+ + GSPLAG++FV+ GAGGAG++LA+GAK +GARVV+ + FERAK LA V G A
Sbjct: 371 SPAVGSPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTL 430
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
+I NF PE+G ILAN T +GM P + P+ + L+ Y LVFDA+YTP+ TRLL++A+
Sbjct: 431 AEIENFHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKE 490
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+G IIV G EM +RQ Q+ FTG AP+E RE++
Sbjct: 491 SGKIIVYGTEMLIRQGFEQYKNFTGLPAPEELFRELM 527
>gi|356495945|ref|XP_003516831.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 527
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/514 (53%), Positives = 366/514 (71%), Gaps = 12/514 (2%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN T+IC P+M +SVE++ ++ +AKA GAD+VEIRLD + F P +DL + + LP+
Sbjct: 17 KNATLICVPIMGESVEKMEIDVDKAKAGGADLVEIRLDSLKTFDPYRDLNAFIQHRSLPL 76
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSG 123
L YRPKW GG+Y+GDE+KRL+AL LA +LGADY+D EL+VA +I GK ++
Sbjct: 77 LFTYRPKWEGGMYDGDENKRLDALRLAMELGADYIDIELQVAHEFYDSIRGKTFNK---- 132
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPI 183
T+ IVS + TPS EDLG LV+R+QATGADI+K+ + DIT++AR+FQ++ H QVP
Sbjct: 133 TKVIVSSHNYQLTPSIEDLGNLVARIQATGADIVKIATTALDITDVARMFQIMVHSQVPF 192
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVF 241
I +G+RGL+S++LS KF G L +G+L+ V G PT++ L Y + + DTKVF
Sbjct: 193 IGLVMGDRGLISRILSAKFGGYLTFGTLESGVVSAPGQPTLKDLLYLYNLRQLAPDTKVF 252
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G+I KPVGHSK PIL N F+ + NG+Y+ + VDDL F TYSS DF GFSV P+KE
Sbjct: 253 GIIGKPVGHSKSPILFNEVFKSIGLNGVYLFLLVDDLANFLRTYSSTDFVGFSVTIPHKE 312
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
+K CDEV P+A++I AVN I+RRP+DGKLIGYNTD +ITAIE+ + RG NG+++
Sbjct: 313 TALKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAITAIENGL--RGKHNGSST 370
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 421
SPLAG++FV+ GAGGAG+ALA+GAK++GARVVI + ++ A+ LA + G A D+
Sbjct: 371 TISPLAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDHARKLAYAIGGDALALADL 430
Query: 422 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 481
N+ PE G ILAN T +GM P D PVS+ L+ Y LVFDAVYTP+ TRLLK+AE +GA
Sbjct: 431 DNYHPEDGMILANTTSIGMQPKVDETPVSKHALKYYSLVFDAVYTPKITRLLKEAEESGA 490
Query: 482 IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
IV+G+EMF+ QA GQ+ FTG APKE R+I+
Sbjct: 491 TIVTGLEMFMGQAYGQYENFTGLPAPKELFRKIM 524
>gi|359477446|ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Vitis vinifera]
Length = 522
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 268/515 (52%), Positives = 360/515 (69%), Gaps = 7/515 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
++KN+T+IC P+M +++E+++ +M +AK GAD+VE+RLD + F P +DLE+++ K PL
Sbjct: 6 MSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPL 65
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG YEGDE+ R +AL LA +LGADYVD ELKVA + + +
Sbjct: 66 PTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFK 125
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VP 182
IVS + TPS EDLG LV +QATGADI+K+ + +IT++ARIFQ+ H Q VP
Sbjct: 126 VIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVP 185
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
+I +GERGL+S++L PKF+G L +GSL+ V G PT++ L Y + DTKV
Sbjct: 186 VIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKV 245
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
FG+I KPV HSK P L+N F+ V +NG+YV + VDD+ KFF TYS+ DFAGFS P+K
Sbjct: 246 FGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHK 305
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
EA +K CDEV P+A++I AVN IIRRPSDGKL GYNTD +I+AIED +++ + T+
Sbjct: 306 EAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTS 365
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
GSPLAG++FV+ GAGGAG+ALA+GAK +GARVVI + + RA+ LA V G A D
Sbjct: 366 --GSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLAD 423
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ NF PE G ILAN T +GM P D P+S+ L+ Y LVFDA+YTP+ TRLL++A+ +G
Sbjct: 424 LNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQESG 483
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
A IV+G+EMF+ QA QF FTG APKE ++ +
Sbjct: 484 ATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQFI 518
>gi|255542472|ref|XP_002512299.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548260|gb|EEF49751.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 524
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 258/515 (50%), Positives = 345/515 (66%), Gaps = 8/515 (1%)
Query: 5 NITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP 64
++ + T++C PLM +V+Q+L M +A ADVVEIRLDC+ N P +DLEI++ + P
Sbjct: 10 SVQSSPTLLCTPLMGTTVDQMLLEMRKATEISADVVEIRLDCLRNLNPRQDLEILIKQSP 69
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRP W GG YEGDE KR +AL A LGA+YVD EL+VA Y
Sbjct: 70 LPTLVTYRPIWEGGQYEGDETKRQDALRFAMQLGANYVDVELEVAHEFNNSIYGKKPDNF 129
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
+ IVS + TPS E + LV+R+QATGADI+K+ + DIT+ ARIFQ++ HCQVP+I
Sbjct: 130 KVIVSSHNFHNTPSSEAIANLVARIQATGADIVKIATTALDITDCARIFQIMVHCQVPVI 189
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFG 242
+GERGL+S+LLSPKF G L YG+L+ + G PT + L Y I DTKV+G
Sbjct: 190 GIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIRPDTKVYG 249
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-GFSVGFPYKE 301
+I KPVGHSK P+L N F+ V N +YV VDD++KFFSTYSS DFA G S P+KE
Sbjct: 250 IIGKPVGHSKSPLLFNAAFKSVGLNAVYVHFLVDDVEKFFSTYSSVDFASGCSCTIPHKE 309
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
+K DE+ P+A+ I A+N IIRRP D L+ YNTD +I AIED ++E NG
Sbjct: 310 VALKCMDEIDPIAKKIGAINNIIRRP-DATLMAYNTDYIGAIDAIEDGLREL---NGAVP 365
Query: 362 FG-SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
G SPLAG++FV+ GAGGAG++LA+GA +GARVV+ + FERAK LA V G A ++
Sbjct: 366 AGTSPLAGKLFVVLGAGGAGKSLAYGAAQKGARVVVANRTFERAKELADKVNGQAMTLDE 425
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ NF PE+G +LAN T +GM PN D P+++ L+ Y +VFDA+YTP+ TRLL++A+ +G
Sbjct: 426 VQNFHPEEGMVLANTTSVGMKPNIDATPLAKHALKHYCVVFDAIYTPKDTRLLREAKESG 485
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
A+IV G EM +RQ Q+ FTG AP+E R+++
Sbjct: 486 AVIVYGTEMLIRQGFEQYKNFTGLPAPEELFRQLM 520
>gi|255551621|ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223543944|gb|EEF45470.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 539
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/516 (51%), Positives = 355/516 (68%), Gaps = 4/516 (0%)
Query: 2 GVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT 61
GV + KN T+ICAP+MA SV+++L N+ +AK GAD+VEIRLD + F D++ ++T
Sbjct: 23 GVGGLRKNPTLICAPIMADSVDKMLINLVKAKENGADLVEIRLDSLKTFNASDDIKTLIT 82
Query: 62 KKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ 121
+ PLP L YRPKW GG Y+GDE++RL+AL LA +LGADY+D ELKVA +
Sbjct: 83 RSPLPTLFTYRPKWEGGEYDGDENERLDALRLAMELGADYIDVELKVAHKFNDSIRGNKP 142
Query: 122 SGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV 181
+ + IVS + TPS EDLG LV+ +QA GADI+K+ + DIT++ARIFQ+ H QV
Sbjct: 143 AKCKVIVSSHNYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITVHSQV 202
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTK 239
PII +GERGL+S++L KF G L +G+L+ V G P ++ L Y I DTK
Sbjct: 203 PIIGIVMGERGLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIGPDTK 262
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
V+G+I KPVGHSK P+L+N F+ V +NG+YV + VDD+ F T+SS DFAGFS P+
Sbjct: 263 VYGIIGKPVGHSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSCTIPH 322
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA + CD + +A++I AVN IIRR DGKL GYNTD + +ITAIE+ + R +N +
Sbjct: 323 KEAAVDCCDGIDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGL--RVSQNIS 380
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
+ SPLAG++FV+ GAGGAG+ALA+GAK +GA+VVI + +ERAK LA V G A
Sbjct: 381 GAADSPLAGKLFVVIGAGGAGKALAYGAKQKGAKVVIANRTYERAKGLADAVGGVAIALA 440
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
D+ NF+PE G +LAN T +GM P + P+ + LR+Y LVFDAVYTP+ TRLL++AE +
Sbjct: 441 DLGNFRPESGMVLANTTSIGMQPKVEETPIPKHALRNYSLVFDAVYTPKITRLLREAEES 500
Query: 480 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
GA VSG+EMF+ QA QF FTG APKE R+I+
Sbjct: 501 GAATVSGLEMFIGQAYEQFENFTGLPAPKELFRKIM 536
>gi|224107417|ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 538
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/517 (52%), Positives = 351/517 (67%), Gaps = 4/517 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
MG + +N T+IC P+MA SV+++ M +AK+ GAD+VEIRLD + +F P D++ ++
Sbjct: 21 MGSGGVRRNPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLI 80
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
PLP L YRP W GG Y GDE RL+AL LA +LGADY+D ELKVA +
Sbjct: 81 LHSPLPTLFTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNK 140
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ IVS + TPS E+LG LV+R+QA GADI+K+ + DI+++ARIFQ+ H Q
Sbjct: 141 PGKCKLIVSSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQ 200
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
VPII +GERGL+S++L KF G L +G+L+ V G PT++ L Y I DT
Sbjct: 201 VPIIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDT 260
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KVFG+I KPVGHSK P+L N F+ V NG+YV + VDD+ +F TYSS DFAGFS P
Sbjct: 261 KVFGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTIP 320
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE K CDEVHP+A++I AVN IIRR +DGKL GYNTD +I+AIE+ + R +N
Sbjct: 321 HKEDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGL--RASQNV 378
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
+ + GSPLAG++FV+ GAGGAG+ALA+GAK +GARVVI + +ERAK LA + G A
Sbjct: 379 SNTVGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITL 438
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
D+ NF PE G ILAN T +GM P D PVS+ LR Y LVFDAVYTP+ TRLL++AE
Sbjct: 439 ADLENFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEE 498
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+GA IV+G+EMF+ QA QF FT APKE ++I+
Sbjct: 499 SGAKIVTGLEMFIGQAYEQFERFTELPAPKELFQKIM 535
>gi|297833382|ref|XP_002884573.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
gi|297330413|gb|EFH60832.1| EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata]
Length = 603
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/517 (51%), Positives = 353/517 (68%), Gaps = 2/517 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
+G +I KN ++ICAP+MA S+++++ ++A GAD+VEIRLD + +F P +DL+ I+
Sbjct: 84 IGSQDIVKNPSLICAPVMADSIDKMVIETFKAHELGADLVEIRLDWLKDFNPIEDLKTII 143
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
K PLP L YRPKW GG YEGDE++R + L LA +LGADYVD EL+VAS+ +
Sbjct: 144 KKSPLPTLFTYRPKWEGGQYEGDENERQDVLRLAMELGADYVDVELQVASDFIKSIDGKK 203
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
R IVS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S Q
Sbjct: 204 PESFRVIVSSHNYQNTPSVEDLNDLVARIQQTGADIVKIATTAVDIADVARMFHITSSAQ 263
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
P I +GERGL+S++L KF G L +G+L + V G PT++ L Y I DT
Sbjct: 264 GPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDT 323
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G+I KPV HSK PI+HN F+ V++ G+YV + VD+L F YSS DFAGFS P
Sbjct: 324 KVYGIIGKPVSHSKSPIVHNQAFKSVDFKGVYVHLLVDNLASFLQAYSSSDFAGFSCTIP 383
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA ++ CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G +
Sbjct: 384 HKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRRSGDPSS 443
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
S SPLAG+ V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A
Sbjct: 444 GPSSSSPLAGKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGRALSL 503
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
D+ NF PE G +LAN T +GM PN D P+S+ L+ Y LVFDAVYTPR TRLL++AE
Sbjct: 504 TDLDNFHPEDGMVLANTTSMGMQPNVDETPISKHALKHYALVFDAVYTPRITRLLREAEE 563
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+GAI VSG EMF+RQA QF +FTG APKE +I+
Sbjct: 564 SGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|413916609|gb|AFW56541.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
gi|413916610|gb|AFW56542.1| hypothetical protein ZEAMMB73_391045 [Zea mays]
Length = 534
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/519 (52%), Positives = 354/519 (68%), Gaps = 8/519 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KP 64
+T+ TM+C P A++ ++ + + A A GADV E+RLDC+ F P +DL +IL K +P
Sbjct: 17 VTRPRTMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRP 76
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA +
Sbjct: 77 LPALVTYRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNC 136
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---V 181
+ IVS + TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ V
Sbjct: 137 KLIVSSHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQV 196
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTK 239
PII + +RG +S++L PK+ G L +GSLK PT L Y + I DTK
Sbjct: 197 PIIGLVMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTK 256
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFG+I KPVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+
Sbjct: 257 VFGIIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPH 316
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA ++ CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T
Sbjct: 317 KEAAVRCCDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPT 374
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A
Sbjct: 375 DPDKSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLA 434
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
D+ N+ PE+G ILAN T +GMHPN + P+S++ LR Y +VFDAVYTP++TRLL++A
Sbjct: 435 DLENYHPEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAEC 494
Query: 480 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
GA +VSG+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 495 GATVVSGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTK 533
>gi|449448440|ref|XP_004141974.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 529
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/512 (49%), Positives = 349/512 (68%), Gaps = 4/512 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I++N+T+IC P+M++S+++++ ++ +A GAD+VEIRLD + F P +DL++++ + PL
Sbjct: 17 ISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDLKLLIKESPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y+GDE++RL+ L LA LGADY+D EL+VA + + +
Sbjct: 77 PTLFTYRPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEKPNNFK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + +TPS EDLG LV+ +QATGADI+K+ + DIT++AR+FQ+L + QVPII
Sbjct: 137 VIVSNHNYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYSQVPIIG 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+ +RG + +LL PK+ G L +G+L+ V G PT++ L Y HI DTKVFG+
Sbjct: 197 LVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPDTKVFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PVG SK P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV
Sbjct: 257 IGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAV 316
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
K+CDEV +A+A AVN ++RR SDGKL GYNTDC +I+AIED + G N + +
Sbjct: 317 FKYCDEVDSVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDSFAVS 374
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
S LAG++ V+ GAGG G+A+A+GAK +GAR+VI + F+RA+ LA V G + D+ N
Sbjct: 375 SRLAGKLVVVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSVSLADLEN 434
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F PE G IL NATP+GM P D P+ + L+ Y LVFDAVYTPR TRLL++AE +GA I
Sbjct: 435 FHPEDGMILVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREAEESGAAI 494
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V G+EMF RQA Q+ FTG APKE +R+ +
Sbjct: 495 VPGLEMFTRQAYEQYEGFTGLPAPKERIRKFL 526
>gi|76782194|gb|ABA54867.1| putative 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Fagus sylvatica]
Length = 536
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 270/524 (51%), Positives = 358/524 (68%), Gaps = 19/524 (3%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I KN T++CAP+MA+SV++++ NM +AK GAD+VEIRLD + +F P DL+ ++ + PL
Sbjct: 22 IRKNPTLVCAPIMAESVDKMVINMDKAKQGGADLVEIRLDSLKSFNPNGDLKTLIKECPL 81
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG Y+GDE KRL+AL LA + GADY+D EL+VA Y +
Sbjct: 82 PTLFTYRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVAQEFNESIYGKKPEMFK 141
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VP 182
IVS + TPS EDLG LV+R+QATGADI+K + +IT++ARIFQ++ H Q VP
Sbjct: 142 VIVSSHNYQNTPSVEDLGNLVARIQATGADIVKFATTALEITDVARIFQIIVHSQVSSVP 201
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
IIA +GERG +S++L PKF G L +G+++ V G P ++ L Y I DTKV
Sbjct: 202 IIAIVMGERGFISRILCPKFGGFLSFGTIESGIVSAPGQPIMKDLLHLYNFRQIGPDTKV 261
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD-----FAGFSV 295
FG+I KPVGHSK PIL+N F+ V +NG+YV L + + SPD FAGFS+
Sbjct: 262 FGIIGKPVGHSKSPILYNEAFKSVGFNGVYV------LSWWMTCKISPDLLILRFAGFSI 315
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KEA +K CDEV P+A++I AVN I+RR +DGK+ GYNTD +I+AIED + RG
Sbjct: 316 TIPHKEAALKCCDEVDPVAKSIGAVNCIVRRSTDGKIFGYNTDYVGAISAIEDGL--RGS 373
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
KN + + SPLAG++FV+ GAGGAG+ALA+GAK +GARVVI + +ERAK +A V G A
Sbjct: 374 KNISYAADSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKEIADTVGGQA 433
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
D+ NF PE G ILAN T +GM P D P+ + LR Y +VFDAVYTP+ TRLL++
Sbjct: 434 LSLADLENFHPEDGMILANTTSIGMQPKVDETPIPKHALRSYSVVFDAVYTPKITRLLRE 493
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+E +GAIIV+GVEMF+ QA QF FTG APKE ++I +AK+
Sbjct: 494 SEESGAIIVTGVEMFIGQAFEQFERFTGLPAPKELFKKI-MAKY 536
>gi|297736925|emb|CBI26126.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/490 (53%), Positives = 341/490 (69%), Gaps = 4/490 (0%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87
+M +AK GAD+VE+RLD + F P +DLE+++ K PLP L YRPKW GG YEGDE+ R
Sbjct: 4 DMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDENSR 63
Query: 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVS 147
+AL LA +LGADYVD ELKVA + + + IVS + TPS EDLG LV
Sbjct: 64 RDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVV 123
Query: 148 RMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALV 207
+QATGADI+K+ + +IT++ARIFQ+ H QVP+I +GERGL+S++L PKF+G L
Sbjct: 124 SIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLT 183
Query: 208 YGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+GSL+ V G PT++ L Y + DTKVFG+I KPV HSK P L+N F+ V
Sbjct: 184 FGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVG 243
Query: 266 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325
+NG+YV + VDD+ KFF TYS+ DFAGFS P+KEA +K CDEV P+A++I AVN IIR
Sbjct: 244 FNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNCIIR 303
Query: 326 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
RPSDGKL GYNTD +I+AIED +++ + T+ GSPLAG++FV+ GAGGAG+ALA+
Sbjct: 304 RPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTS--GSPLAGKLFVVIGAGGAGKALAY 361
Query: 386 GAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD 445
GAK +GARVVI + + RA+ LA V G A D+ NF PE G ILAN T +GM P D
Sbjct: 362 GAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENGMILANTTSIGMQPKVD 421
Query: 446 RVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
P+S+ L+ Y LVFDA+YTP+ TRLL++A+ +GA IV+G+EMF+ QA QF FTG
Sbjct: 422 ETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEMFIGQAYEQFERFTGLP 481
Query: 506 APKEFMREIV 515
APKE ++ +
Sbjct: 482 APKELFKQFI 491
>gi|388521847|gb|AFK48985.1| unknown [Medicago truncatula]
Length = 515
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/517 (50%), Positives = 362/517 (70%), Gaps = 16/517 (3%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPV 67
N T+IC P+M ++++++++++ +AK GAD+VEIRLD + F P +DL + + LP
Sbjct: 2 NATLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSG 123
L YRPKW GG+YEGDE++RL+AL LA +L ADY+D ELKVA +I GK Y+
Sbjct: 62 LFTYRPKWEGGMYEGDENQRLDALRLAMELEADYIDIELKVAHQFYDSIRGKTYNK---- 117
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-- 181
T+ IVS + +TPS EDLG LV+R+QATGADI+K+ + +IT++AR+F+++ H QV
Sbjct: 118 TKVIVSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFEIMVHSQVRH 177
Query: 182 -PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
P I +G+RGL+S++L KF G L +G+L+ V G PT++ L Y I DT
Sbjct: 178 VPFIGLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPDT 237
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G++ KPV HSK PIL N F+ + ++G++V + VDDL F TYSS DF GFSV P
Sbjct: 238 KVYGIVGKPVSHSKSPILFNEAFKTIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIP 297
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA +K CDEV P+A++I AVN ++RRP+DGKLIGYNTD +I+AIED ++ + +G
Sbjct: 298 HKEAALKCCDEVDPVAKSIGAVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHIDSG 357
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
TA SPLAG++FV+ GAGGAG+ALA+GAK +GAR+VI + ++RA+ LA + G A
Sbjct: 358 TAV--SPLAGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTL 415
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
D+ N+ PE G ILAN T +GM P D P+S+ L+ Y LVFDAVYTP+ TRLLK+AE
Sbjct: 416 NDLDNYHPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEE 475
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+GA IV+G+EMF+ QA Q+ +TG APKE R+I+
Sbjct: 476 SGATIVTGLEMFIGQAYRQYEHYTGLPAPKELFRKIM 512
>gi|397911046|gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 490
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/503 (51%), Positives = 347/503 (68%), Gaps = 15/503 (2%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
+ICAP+M +SV+ +L M +AK GAD+VE+RLD I NF P KDL+ ++ + PLP LI Y
Sbjct: 1 LICAPVMGESVDDMLMEMRKAKEYGADLVEVRLDYIKNFSPRKDLDTLIRECPLPTLITY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RPKW GGLYEGDE+KRL+AL +A +LG DY+D EL+VA + ++ + IVS +
Sbjct: 61 RPKWEGGLYEGDENKRLDALRVAMELGVDYIDIELQVAHEFIHSVHAKKPEKFKIIVSSH 120
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS ED+G LV+R+QATGADI+K+ + +IT++AR+FQ++ H QVPII +GER
Sbjct: 121 NYQSTPSVEDIGDLVARIQATGADIVKIATTALEITDVARMFQIIVHSQVPIIGLVMGER 180
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S+LL PKF G L +G+++ + G PT++ L Y I DTKVFG+I KPV
Sbjct: 181 GLMSRLLCPKFGGYLTFGAIEAGKLSAPGQPTIKDLLDKYNFRQIGPDTKVFGVIGKPVS 240
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
SK P+L+N F+ + YNG+YV VDD+ KF TY SPDFAGFS P+KEA +++ DE
Sbjct: 241 QSKSPLLYNNAFKSIGYNGVYVQFLVDDIAKFLKTYPSPDFAGFSCTMPHKEAALEYLDE 300
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ P+A+ I AVN I+RR SDGKL GYNTD +I+AIED ++ S LAG+
Sbjct: 301 IDPIAKLIGAVNCIVRR-SDGKLSGYNTDYFGAISAIEDGLR------------SLLAGK 347
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 429
+FV+ GAGGAG+ALAFGAK +GARVVI + F+RA LA V G A ++ NF PE G
Sbjct: 348 LFVVIGAGGAGKALAFGAKEKGARVVIANRTFDRASKLADIVGGQAISLMELDNFHPEDG 407
Query: 430 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 489
+LAN T +GM P D P+ ++ L +Y LVFDAVYTP+ TRLL++AE GA +VSG+EM
Sbjct: 408 MVLANTTSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEM 467
Query: 490 FLRQAIGQFNLFTGKEAPKEFMR 512
F+RQA Q+ FTG APKE R
Sbjct: 468 FIRQAYEQYERFTGLPAPKELFR 490
>gi|15230703|ref|NP_187286.1| Shikimate dehydrogenase [Arabidopsis thaliana]
gi|75207269|sp|Q9SQT8.1|DHQSD_ARATH RecName: Full=Bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic; Short=DHQ-SDH protein;
AltName: Full=DHQase-SORase; AltName: Full=Protein
EMBRYO DEFECTIVE 3004; Includes: RecName:
Full=Dehydroquinate dehydratase; Short=DHQ; Includes:
RecName: Full=Shikimate dehydrogenase; Short=SDH; Flags:
Precursor
gi|6437552|gb|AAF08579.1|AC011623_12 putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
gi|332640860|gb|AEE74381.1| Shikimate dehydrogenase [Arabidopsis thaliana]
Length = 603
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/517 (51%), Positives = 353/517 (68%), Gaps = 2/517 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
+G +I KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+
Sbjct: 84 IGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTII 143
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
K PLP L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS +
Sbjct: 144 KKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKK 203
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ IVS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S Q
Sbjct: 204 PGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQ 263
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
VP I +GERGL+S++L KF G L +G+L + V G PT++ L Y I DT
Sbjct: 264 VPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDT 323
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G+I KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P
Sbjct: 324 KVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIP 383
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA ++ CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G +
Sbjct: 384 HKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSS 443
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
S SPLA + V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A
Sbjct: 444 VPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSL 503
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
D+ N+ PE G +LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE
Sbjct: 504 TDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEE 563
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+GAI VSG EMF+RQA QF +FTG APKE +I+
Sbjct: 564 SGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|195641452|gb|ACG40194.1| shikimate dehydrogenase [Zea mays]
Length = 540
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/501 (52%), Positives = 345/501 (68%), Gaps = 5/501 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KP 64
+T+ TM+C P A++ ++ + + A A GADV E+RLDC+ F P +DL +IL K +P
Sbjct: 17 VTRPRTMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFTPRRDLPVILAKPRP 76
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA +
Sbjct: 77 LPALVTYRPKWEGGEYEGDDDSRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNC 136
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
+ IVS + TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQVPII
Sbjct: 137 KLIVSSHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQVPII 196
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFG 242
+ +RG +S++L PK+ G L +GSLK PT L Y + I DTKVFG
Sbjct: 197 GLLMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTKVFG 256
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 302
+I KPVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+KEA
Sbjct: 257 IIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEA 316
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
++ CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T
Sbjct: 317 AVRCCDEVDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPTDPD 374
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A D+
Sbjct: 375 KSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLADLE 434
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
N+ PE+G ILAN T +GMHPN + P+S++ LR Y +VFDAVYTP++TRLL++A GA
Sbjct: 435 NYHPEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAECGAT 494
Query: 483 IVSGVEMFLRQAIGQFNLFTG 503
+VSG+EMF+RQA+GQF FTG
Sbjct: 495 VVSGLEMFIRQAMGQFEHFTG 515
>gi|45773760|gb|AAS76684.1| At3g06350 [Arabidopsis thaliana]
Length = 603
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/517 (50%), Positives = 352/517 (68%), Gaps = 2/517 (0%)
Query: 1 MGVVNITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL 60
+G +I KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+
Sbjct: 84 IGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTII 143
Query: 61 TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSH 120
K PLP L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS +
Sbjct: 144 KKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKK 203
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ IVS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S Q
Sbjct: 204 PGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQ 263
Query: 181 VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADT 238
VP I +GERGL+S++L KF G L +G+L + V G PT++ L Y I DT
Sbjct: 264 VPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDT 323
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+G+I KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P
Sbjct: 324 KVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIP 383
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KEA ++ CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G +
Sbjct: 384 HKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSS 443
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
S SPLA + V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A
Sbjct: 444 VPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSL 503
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
D+ N+ PE G +LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TR L++AE
Sbjct: 504 TDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRQLREAEE 563
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+GAI VSG EMF+RQA QF +FTG APKE +I+
Sbjct: 564 SGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIM 600
>gi|109157947|pdb|2GPT|A Chain A, Crystal Structure Of Arabidopsis Dehydroquinate
Dehydratase- Shikimate Dehydrogenase In Complex With
Tartrate And Shikimate
Length = 523
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/510 (51%), Positives = 349/510 (68%), Gaps = 2/510 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+ K PLP
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + I
Sbjct: 62 LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+GERGL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SP
Sbjct: 302 CCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LA + V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 421
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE G +LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VS
Sbjct: 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 481
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
G EMF+RQA QF +FTG APKE +I+
Sbjct: 482 GSEMFVRQAYEQFEIFTGLPAPKELYWQIM 511
>gi|281193024|gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]
Length = 526
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/512 (50%), Positives = 350/512 (68%), Gaps = 7/512 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ KN T+ICAP+MA SV+Q+L M +AK GAD+V +R+D + +F P D++ ++ + PL
Sbjct: 17 MRKNQTLICAPIMADSVDQMLILMQKAKTSGADLVGVRVDSLKSFNPRPDIDALIKQCPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y GDE RL+AL LA +LGADY+D ELK + + + +
Sbjct: 77 PTLFTYRPTWEGGQYAGDEMSRLDALRLAMELGADYIDVELKAIDEFNNALHGNKSAKCK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS EDLG LV+R+QA+GADI+K + DIT++AR+FQ+ H QVPIIA
Sbjct: 137 LIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVARVFQITVHSQVPIIA 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GE+GL+S++L PKF G L +G+L+ V G PTVE L Y + DTK+FG+
Sbjct: 197 MVMGEKGLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLLNLYNFRQLGPDTKIFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPV HSK P+L+N +FR V +NG+++ + VDD+ FF TYSS DFAGFS P+KEA
Sbjct: 257 IGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLDFAGFSCTIPHKEAA 316
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ C E+ P A+AI AVN IIRRP DGKL G NTD +I+AIE+ ++ G + + G
Sbjct: 317 LDCCAEIDPTAKAIGAVNCIIRRP-DGKLFGCNTDYIGAISAIEEGLQ--GSQPSIS--G 371
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
SPLAG++FV+ GAGGAG+A+A+GAK +GARVVI + +ERA+ LA V A +++ N
Sbjct: 372 SPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARELAIVVGAEALSLDELSN 431
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F PE ILAN T +GM P D P+S+E L+ Y LVFDAVYTP+ TRLL++A+ +GA I
Sbjct: 432 FHPENDMILANTTSIGMQPKVDDTPISKEALKHYPLVFDAVYTPKITRLLREAQESGAKI 491
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+GVEMF+ QA Q+ FTG APKE + I+
Sbjct: 492 VTGVEMFIGQAYEQYERFTGLPAPKELFKNIM 523
>gi|212274689|ref|NP_001130790.1| shikimate dehydrogenase1 [Zea mays]
gi|194690122|gb|ACF79145.1| unknown [Zea mays]
gi|413916608|gb|AFW56540.1| shikimate dehydrogenase [Zea mays]
Length = 543
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/504 (52%), Positives = 345/504 (68%), Gaps = 8/504 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KP 64
+T+ TM+C P A++ ++ + + A A GADV E+RLDC+ F P +DL +IL K +P
Sbjct: 17 VTRPRTMVCVPATARAPREMAAELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRP 76
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
LP L+ YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA +
Sbjct: 77 LPALVTYRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVELKVADKFMKLISGRKPDNC 136
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---V 181
+ IVS + TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ V
Sbjct: 137 KLIVSSHNYETTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQV 196
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTK 239
PII + +RG +S++L PK+ G L +GSLK PT L Y + I DTK
Sbjct: 197 PIIGLVMNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINLYNIRQIGPDTK 256
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFG+I KPVGHSK PILHN FR V +N +YVP VDDL KF TYSSPDFAGFS P+
Sbjct: 257 VFGIIGKPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLDTYSSPDFAGFSCTIPH 316
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA ++ CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED IK T
Sbjct: 317 KEAAVRCCDEVDPVARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIKA-SESEPT 374
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A
Sbjct: 375 DPDKSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLA 434
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
D+ N+ PE+G ILAN T +GMHPN + P+S++ LR Y +VFDAVYTP++TRLL++A
Sbjct: 435 DLENYHPEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLREAAEC 494
Query: 480 GAIIVSGVEMFLRQAIGQFNLFTG 503
GA +VSG+EMF+RQA+GQF FTG
Sbjct: 495 GATVVSGLEMFIRQAMGQFEHFTG 518
>gi|58041010|gb|AAW63134.1| dehydroquinate dehydratase/shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 510
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/507 (51%), Positives = 347/507 (68%), Gaps = 2/507 (0%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+ K PLP L
Sbjct: 1 SLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFT 60
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + IVS
Sbjct: 61 YRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSS 120
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I +GE
Sbjct: 121 HNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVMGE 180
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RGL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I KPV
Sbjct: 181 RGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIGKPV 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++ CD
Sbjct: 241 SHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCD 300
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV PLA++I AVNTI+RR SDGKL+GYNTDC SI+AIED ++ G + S SPLA
Sbjct: 301 EVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLAS 360
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
+ V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE
Sbjct: 361 KTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPED 420
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G +LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG E
Sbjct: 421 GMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSE 480
Query: 489 MFLRQAIGQFNLFTGKEAPKEFMREIV 515
MF+RQA QF +FTG APKE +I+
Sbjct: 481 MFVRQAYEQFEIFTGLPAPKELYWQIM 507
>gi|160877702|pdb|2O7Q|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-Dehydroshikimate-Sdh- Shikimate-Nadp(H)
gi|160877703|pdb|2O7S|A Chain A, Crystal Structure Of The A. Thaliana
Dhq-dehydroshikimate-sdh- Shikimate-nadp(h)
Length = 523
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/510 (51%), Positives = 348/510 (68%), Gaps = 2/510 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN ++ICAP+MA S+++++ +A GAD+VEIRLD + +F P +DL+ I+ K PLP
Sbjct: 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L YRPKW GG YEGDE++R + L LA +LGADY+D EL+VAS + + I
Sbjct: 62 LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS EDL LV+R+Q TGADI+K+ + DI ++AR+F + S QVP I
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+GERGL+S++L KF G L +G+L + V G PT++ L Y I DTKV+G+I
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KPV HSK PI+HN F+ V++NG+YV + VD+L F YSS DFAGFS P+KEA ++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV PLA++I AVNTI+RR SDGKL+GYNTD SI+AIED ++ G + S SP
Sbjct: 302 XCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDXIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LA + V+ GAGGAG+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 421
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE G +LAN T +GM PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VS
Sbjct: 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 481
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
G EMF+RQA QF +FTG APKE +I+
Sbjct: 482 GSEMFVRQAYEQFEIFTGLPAPKELYWQIM 511
>gi|449503035|ref|XP_004161812.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/512 (50%), Positives = 346/512 (67%), Gaps = 5/512 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I +N++++C P+MA S + ++++ +AK GAD+VEIRLD + F DL ++ + PL
Sbjct: 28 IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG Y+GDE++RLE L L +LGADYVD EL+VA + +
Sbjct: 88 PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + ETPS +DLG LV+R+Q +GADI+K+ + DIT+++RIF ++ H QVP+I
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GERGL+S++L KF G L + +L+ V G PT++ L Y I DTKV+G+
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPVGHSK P+L N F+ + +NG+YV VDD+ F TYSS DFAGFS P+KEA
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
KFCDEV P+A++I AVN I+RR DGK GYNTD +I+AIE+ K +G G+ G
Sbjct: 328 AKFCDEVDPVAKSIGAVNCIVRR-HDGKFCGYNTDYVGAISAIEE--KLQGDYTGSPLSG 384
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
SPL GR+FV+ GAGGAG+ALA+GAK +GA+V+I + +ERAK LA + G A D+ N
Sbjct: 385 SPLFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLNN 444
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F PE ILAN T +GM P + P++++ LR Y LVFDAVYTP TRLLKDAEA+GA I
Sbjct: 445 FHPEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAKI 504
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+G+EMF+ QA Q+ FTG APKE R+I+
Sbjct: 505 VTGLEMFVGQAYEQYERFTGMPAPKELFRKIM 536
>gi|242085728|ref|XP_002443289.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
gi|241943982|gb|EES17127.1| hypothetical protein SORBIDRAFT_08g016970 [Sorghum bicolor]
Length = 541
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/498 (52%), Positives = 339/498 (68%), Gaps = 10/498 (2%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLIV 70
M+C P A++ ++ + A A GADV E+RLDC+ F P +DL +IL K +PLP L+
Sbjct: 23 MVCVPATARAPREMAEELAAAAALGADVAELRLDCLAGFAPRRDLPVILAKPRPLPALVT 82
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRPKW GG YEGD+ R EAL LA +LGA+YVD E KVA + + IVS
Sbjct: 83 YRPKWEGGEYEGDDESRFEALLLAMELGAEYVDVEFKVADKFMKLISGKKPDNCKLIVSS 142
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYS 187
+ TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII
Sbjct: 143 HNYENTPSSEELANLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLV 202
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+ +RG +S++L PK+ G L +GSLK PT L Y + I DTKVFG+I
Sbjct: 203 MNDRGFISRVLCPKYGGFLTFGSLKKGKESAPAQPTAADLINVYNIRQIGPDTKVFGIIG 262
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
KPVGHSK PILHN FR V N +YVP VDDL KF +TYSSPDFAGFS P+KEA ++
Sbjct: 263 KPVGHSKSPILHNEAFRSVGSNAVYVPFLVDDLAKFLNTYSSPDFAGFSCTIPHKEAAVR 322
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
CDEV P+A+ I AVNTI+RRP DGKL+GYNTD +I+AIED I+ T S SP
Sbjct: 323 CCDEVDPIARDIGAVNTIVRRP-DGKLVGYNTDYVGAISAIEDGIRA---SEQTDSDTSP 378
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + G A D+ N+
Sbjct: 379 LAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLIGGPALTLADLENYH 438
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE+G ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VS
Sbjct: 439 PEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVS 498
Query: 486 GVEMFLRQAIGQFNLFTG 503
G+EMF+RQA+GQF FTG
Sbjct: 499 GLEMFIRQAMGQFEHFTG 516
>gi|449461453|ref|XP_004148456.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/512 (50%), Positives = 345/512 (67%), Gaps = 5/512 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I +N++++C P+MA S + ++++ +AK GAD+VEIRLD + F DL ++ + PL
Sbjct: 28 IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG Y+GDE++RLE L L +LGADYVD EL+VA + +
Sbjct: 88 PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + ETPS +DLG LV+R+Q +GADI+K+ + DIT+++RIF ++ H QVP+I
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GERGL+S++L KF G L + +L+ V G PT++ L Y I DTKV+G+
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPVGHSK P+L N F+ + +NG+YV VDD+ F TYSS DFAGFS P+KEA
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
KFCDEV P+A+ I AVN I+RR DGK GYNTD +I+AIE+ K +G G+ G
Sbjct: 328 AKFCDEVDPVAKVIXAVNCIVRR-HDGKFCGYNTDYVGAISAIEE--KLQGDYTGSPLSG 384
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
SPL GR+FV+ GAGGAG+ALA+GAK +GA+V+I + +ERAK LA + G A D+ N
Sbjct: 385 SPLFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLNN 444
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F PE ILAN T +GM P + P++++ LR Y LVFDAVYTP TRLLKDAEA+GA I
Sbjct: 445 FHPEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAKI 504
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+G+EMF+ QA Q+ FTG APKE R+I+
Sbjct: 505 VTGLEMFVGQAYEQYERFTGMPAPKELFRKIM 536
>gi|224125422|ref|XP_002319582.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
gi|222857958|gb|EEE95505.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
trichocarpa]
Length = 521
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/511 (49%), Positives = 354/511 (69%), Gaps = 7/511 (1%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+ICAP+MA+SV+Q+L M +AK GADV E+R+D + NF P DLE ++ + PLP
Sbjct: 11 RNSTLICAPIMAESVDQMLVQMKRAKELGADVAEVRVDFLKNFSPRNDLEALIKQCPLPT 70
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
LI YRPKW GG Y+GDE+KR +AL +A +LGAD++D ELKVA + I
Sbjct: 71 LITYRPKWEGGQYDGDENKRQKALQIAMELGADFIDIELKVAQEFYNFIQGKKPEKVKII 130
Query: 128 VSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
VS N +C TPS E++G LV+R+QATGADI+K+ + DIT+ AR+F ++ + QVP+I
Sbjct: 131 VSSHNYEC-TPSIEEIGDLVARIQATGADIVKVATTALDITDNARMFHIIVNLQVPMIGL 189
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+GERGL+S++L+ K+ L +GS++ V G PTV+ L + Y + I ADTKV G+I
Sbjct: 190 VMGERGLMSRVLAAKYGAFLTFGSIEAGVVSAPGQPTVKDLLELYNLRQIEADTKVHGVI 249
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
P+GHSK P L+N F+ V +NGIY+P+ VD + + STYSSPDFAG+S P+KE +
Sbjct: 250 GNPIGHSKSPHLYNAAFKSVGFNGIYLPLLVDSVANYISTYSSPDFAGYSYTIPHKEDGL 309
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
K CDEV P+A+ I A++ +IRRP DGKL GYN D +I AIE+A+ G NG + S
Sbjct: 310 KCCDEVDPIAKEIGAISCMIRRPDDGKLKGYNVDYLGAIAAIEEAL---GASNGAPASVS 366
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PLAG++FV+ GAGGAG+ALA+GA +GARVV+ + + +AK LAS V G A + +F
Sbjct: 367 PLAGKLFVVMGAGGAGKALAYGAYEKGARVVVANRTYGKAKELASKVGGQAIALAKLKDF 426
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
PE+G ILAN T +GM P + P+++E L+ Y LVFDA+YTP+ T LL++A+ AG+ IV
Sbjct: 427 HPEEGMILANTTSVGMKPRIEDTPLAKEALKHYALVFDAIYTPKLTTLLREAQEAGSTIV 486
Query: 485 SGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
G EMF+ QA QF FTG APK+ +R+++
Sbjct: 487 YGTEMFINQAFVQFERFTGLPAPKQLIRDVL 517
>gi|259479224|dbj|BAI40147.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Diospyros
kaki]
Length = 508
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/506 (48%), Positives = 340/506 (67%), Gaps = 4/506 (0%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MICAP+MA++ EQ+L M +AK GAD+VEIR+D + +F P + LE+++ + PLP +I Y
Sbjct: 1 MICAPVMAETAEQMLGQMRKAKELGADLVEIRIDYLKSFSPQQHLEVLIKQSPLPTIITY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG Y+GDE +R LH A +LGADY+D ELKVA + IVS +
Sbjct: 61 RPTWEGGQYDGDESRRQATLHQAMELGADYIDIELKVADEFFSSIQERSPKRPKVIVSSH 120
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS E++G + +R+QATGADI+K+ + DIT+ ARI QL++H QVP I ++GER
Sbjct: 121 NYENTPSAEEIGNIAARIQATGADIVKIATTALDITDSARILQLIAHSQVPTIGLAMGER 180
Query: 192 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S++L KF G L +G+L+ G PT+ L Y I DTKV G+I P+G
Sbjct: 181 GLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIEPDTKVHGVIGNPIG 240
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
HSK P L+N F+ +NGIY+P+ VD++ F +TYSSPDF G+S P+K A ++ CDE
Sbjct: 241 HSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPHKMAGLECCDE 300
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
V P+A+AI A++ +I++PSDGKLIGYN D +I AIE+ + + + SPLAGR
Sbjct: 301 VDPIAKAIGAISCMIKKPSDGKLIGYNVDYLGAIAAIEEGLGGSSSASNGSV--SPLAGR 358
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 429
+FV+ GAGGA +ALA+G K +GARVV+ + +E+AK LA + G + P ++ +F PE G
Sbjct: 359 LFVVIGAGGAAKALAYGGKEKGARVVVANRTYEKAKDLARKIGGESMPLTELNDFHPEDG 418
Query: 430 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 489
ILANAT +GM PNTD P+S+E L Y LVFDA+YTP+ TRLL++A+ GA +V G EM
Sbjct: 419 MILANATSVGMKPNTDATPISKEALSRYSLVFDAIYTPKWTRLLREAKETGAKVVFGTEM 478
Query: 490 FLRQAIGQFNLFTGKEAPKEFMREIV 515
FL QA QF FTG APK+ +RE +
Sbjct: 479 FLNQAFVQFEKFTGLPAPKDLIRETL 504
>gi|326502876|dbj|BAJ99066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 532
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/514 (51%), Positives = 347/514 (67%), Gaps = 10/514 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T+IC P A++ + + + A A GAD+ E+RLD + F P +DL +L K + LP L+
Sbjct: 22 TLICVPATARAPRDMAAEVAAAAALGADLAELRLDRLAGFAPRRDLPALLAKPRTLPTLV 81
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG YEGD+ R EAL LA +LGA+YVD ELKVA + + IVS
Sbjct: 82 TYRPKWEGGEYEGDDEPRFEALQLAMELGAEYVDIELKVADKFIKFMSGKKPENCKLIVS 141
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+L L++++QATGADI+K+ + +I +++R+FQ+L HCQ VPII
Sbjct: 142 SHNYDNTPSAEELASLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGL 201
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PT L Y + I DTKVFG+I
Sbjct: 202 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAAAQPTAADLINVYNIRQIGPDTKVFGII 261
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
PVGHSK PILHN FR V + +YVP VDDL KF STYSSPDFAGFS P+KEA +
Sbjct: 262 GNPVGHSKSPILHNEAFRSVGLHAVYVPFLVDDLAKFLSTYSSPDFAGFSCTIPHKEAAV 321
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTIIR+P DGKL+GYNTD +I+AIED I+ T S S
Sbjct: 322 RCCDEVDPIARDIGAVNTIIRKP-DGKLVGYNTDYVGAISAIEDGIRA---TQPTHSTTS 377
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + G A ++ N+
Sbjct: 378 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLIGGPALTLAELENY 437
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
PE+G ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +V
Sbjct: 438 HPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVV 497
Query: 485 SGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
SG+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 498 SGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLRK 531
>gi|350537731|ref|NP_001234051.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169883|gb|AAC17991.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
gi|3169888|gb|AAC17993.1| dehydroquinate dehydratase/shikimate:NADP oxidoreductase [Solanum
lycopersicum]
Length = 545
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/529 (48%), Positives = 349/529 (65%), Gaps = 26/529 (4%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
KN T+ICAP+MA SV+Q+L M +AK GAD+VE+R+D + +F P D++ ++ + PLP
Sbjct: 19 KNQTLICAPIMADSVDQMLILMQKAKISGADLVEVRVDSLKSFNPRPDIDTLIKQCPLPT 78
Query: 68 LIVYR-------------------PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKV 108
L Y P W GG Y GDE RL+AL LA +LGADY+D ELK
Sbjct: 79 LFTYSYVLGVGQGILLIRYYKGIGPTWEGGQYAGDEKSRLDALRLAMELGADYIDVELKA 138
Query: 109 ASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITE 168
+ + + + IVS + TPS EDLG LV+R+QA+GADI+K + DIT+
Sbjct: 139 IGEFNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDITD 198
Query: 169 IARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLR 226
+AR+FQ+ H QVPIIA +GE+GL+S++L PKF G L +G+L+ V G PTVE L
Sbjct: 199 VARVFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTVEDLL 258
Query: 227 QTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYS 286
Y + DTK+FG+I KPV HSK P+L+N +FR V +NG+++ + VDD+ FF TYS
Sbjct: 259 NLYNFRQLGPDTKIFGIIGKPVSHSKSPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYS 318
Query: 287 SPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
S DFAGFS P+KEA + C E+ P A+AI AVN IIRRP DGKL G NTD +I+AI
Sbjct: 319 SLDFAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRRP-DGKLFGCNTDYIGAISAI 377
Query: 347 EDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKS 406
E+ ++ G + + GSPLAG++FV+ GAGGAG+A+A+GAK +GARVVI + +ERA+
Sbjct: 378 EEGLQ--GSQPSIS--GSPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARE 433
Query: 407 LASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
LA V A +++ NF PE ILAN T +GM P D P+S+E L+ Y LVFDAVYT
Sbjct: 434 LAIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYSLVFDAVYT 493
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
P+ TRLL++A+ +GA IV+GVEMF+ QA Q+ FTG APKE + I+
Sbjct: 494 PKITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIM 542
>gi|218186992|gb|EEC69419.1| hypothetical protein OsI_38581 [Oryza sativa Indica Group]
Length = 531
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/515 (50%), Positives = 351/515 (68%), Gaps = 10/515 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T++C P A++ ++ + + A A GADV E+RLD + F P +DL ++L + +PLP L+
Sbjct: 20 TLLCVPATARAPREMAAELAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALV 79
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG YEGD+ R EAL LA ++GA+YVD ELKVA + + IVS
Sbjct: 80 TYRPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVS 139
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII
Sbjct: 140 SHNFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 199
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PTV L Y ++ I DTKV+G+I
Sbjct: 200 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGII 259
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KPVGHSK PILHN FR V N +YVP VDDL F +TYSSP+FAGFS P+KEA +
Sbjct: 260 GKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAV 319
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+ T + S
Sbjct: 320 RCCDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRA---SQPTDTTTS 375
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + A ++ N+
Sbjct: 376 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENY 435
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
PE+G ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +V
Sbjct: 436 HPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVV 495
Query: 485 SGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
SG+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 496 SGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTKI 530
>gi|46371086|gb|AAS90325.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 1
[Nicotiana tabacum]
Length = 569
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/510 (49%), Positives = 347/510 (68%), Gaps = 7/510 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+T+N T+ICAP+MA +V+Q+L+ M +AK GAD+VE+RLD + +F P D++ I+ + PL
Sbjct: 17 MTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFNPQSDIDTIIKQSPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y GDE RL+AL +A +LGADY+D ELK + + + +
Sbjct: 77 PTLFTYRPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDEFNTALHGNKSAKCK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS E+LG LV+R+QA+GADI+K + DI ++AR+FQ+ H QVPIIA
Sbjct: 137 VIVSSHNYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVHSQVPIIA 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GE+GL+S++L PKF G L +G+L+ V G PT++ L Y + DT++FG+
Sbjct: 197 MVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGPDTRIFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPV HSK P+L+N FR V +NG+Y+P+ VDD+ FF TYSS DFAG +V P+KEA+
Sbjct: 257 IGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVTIPHKEAI 316
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ CDE++P A+ I AVN ++ R DGKL G NTD +I+AIE+A++ + + G
Sbjct: 317 VDCCDELNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQ----GSQPSMSG 371
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
SPLAG++FV+ GAGGAG+ALA+GAK +GARVVI + +ERA+ LA V G A +++ N
Sbjct: 372 SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVVGGQALSLDELSN 431
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F PE ILAN T +GM P D P+ +E LR Y LVFDAVYTP+ TRLL++A +G I
Sbjct: 432 FHPENDMILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITRLLREAHESGVKI 491
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
V+GVEMF+ QA Q+ FTG + K +E
Sbjct: 492 VTGVEMFIGQAYEQYERFTGLASSKGTFQE 521
>gi|535771|gb|AAA34069.1| dehydroquinate dehydratase/shikimate dehydrogenase, partial
[Nicotiana tabacum]
Length = 579
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/510 (49%), Positives = 347/510 (68%), Gaps = 7/510 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+T+N T+ICAP+MA +V+Q+L+ M +AK GAD+VE+RLD + +F P D++ I+ + PL
Sbjct: 27 MTRNETLICAPIMADTVDQMLNLMQKAKISGADLVEVRLDSLKSFNPQSDIDTIIKQSPL 86
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y GDE RL+AL +A +LGADY+D ELK + + + +
Sbjct: 87 PTLFTYRPTWEGGQYAGDEVSRLDALRVAMELGADYIDVELKAIDEFNTALHGNKSAKCK 146
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS E+LG LV+R+QA+GADI+K + DI ++AR+FQ+ H QVPIIA
Sbjct: 147 VIVSSHNYDNTPSSEELGNLVARIQASGADIVKFATTALDIMDVARVFQITVHSQVPIIA 206
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+GE+GL+S++L PKF G L +G+L+ V G PT++ L Y + DT++FG+
Sbjct: 207 MVMGEKGLMSRILCPKFGGYLTFGTLEVGKVSAPGQPTIKDLLNIYNFRQLGPDTRIFGI 266
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I KPV HSK P+L+N FR V +NG+Y+P+ VDD+ FF TYSS DFAG +V P+KEA+
Sbjct: 267 IGKPVSHSKSPLLYNEAFRSVGFNGVYMPLLVDDVANFFRTYSSLDFAGSAVTIPHKEAI 326
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ CDE++P A+ I AVN ++ R DGKL G NTD +I+AIE+A++ + + G
Sbjct: 327 VDCCDELNPTAKVIGAVNCVVSR-LDGKLFGCNTDYVGAISAIEEALQ----GSQPSMSG 381
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
SPLAG++FV+ GAGGAG+ALA+GAK +GARVVI + +ERA+ LA V G A +++ N
Sbjct: 382 SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERARELADVVGGQALSLDELSN 441
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F PE ILAN T +GM P D P+ +E LR Y LVFDAVYTP+ TRLL++A +G I
Sbjct: 442 FHPENDMILANTTSIGMQPKVDDTPIFKEALRYYSLVFDAVYTPKITRLLREAHESGVKI 501
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
V+GVEMF+ QA Q+ FTG + K +E
Sbjct: 502 VTGVEMFIGQAYEQYERFTGLASSKGTFQE 531
>gi|222617206|gb|EEE53338.1| hypothetical protein OsJ_36349 [Oryza sativa Japonica Group]
Length = 531
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/515 (50%), Positives = 349/515 (67%), Gaps = 10/515 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T++C P A++ ++ + A A GADV E+RLD + F P +DL ++L + +PLP L+
Sbjct: 20 TLLCVPATARAPREMAAEFAAAAALGADVAELRLDRLAGFAPRRDLPVLLAQPRPLPALV 79
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG YEGD+ R EAL LA ++GA+YVD ELKVA + + IVS
Sbjct: 80 TYRPKWEGGEYEGDDEPRFEALLLAMEMGAEYVDIELKVADKFMKLISGKKPETCKLIVS 139
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+L LV+++QATGADI+K+ + +I ++A++FQ+L HCQ VPII
Sbjct: 140 SHNFENTPSTEELENLVAQIQATGADIVKIATTATEIVDVAKMFQILVHCQEKQVPIIGL 199
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PTV L Y ++ I DTKV+G+I
Sbjct: 200 VMNDRGFISRVLCPKFGGYLTFGSLEKGKESAPAQPTVTDLINVYNIKQIGPDTKVYGII 259
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KPVGHSK PILHN FR V N +YVP VDDL F +TYSSP+FAGFS P+KEA +
Sbjct: 260 GKPVGHSKSPILHNEAFRSVGLNAVYVPFLVDDLANFLNTYSSPEFAGFSCTIPHKEAAV 319
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+ + T S
Sbjct: 320 RCCDEVDPIAKDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIRASQPTDTTTS--- 375
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ L + + A ++ N+
Sbjct: 376 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENY 435
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
PE+ ILAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +V
Sbjct: 436 HPEEEMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVV 495
Query: 485 SGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
SG+EMF+RQA+GQF FTG AP MR+IVL K
Sbjct: 496 SGLEMFIRQAMGQFEHFTGMPAPDSLMRDIVLTKI 530
>gi|242053027|ref|XP_002455659.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
gi|241927634|gb|EES00779.1| hypothetical protein SORBIDRAFT_03g018040 [Sorghum bicolor]
Length = 509
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/507 (50%), Positives = 343/507 (67%), Gaps = 7/507 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+ ++VE+++++ A A G D+VEIRLD I F+P + L + PLP L+
Sbjct: 2 TLLCVPLVGRTVEEMIADAAAAAATGGDMVEIRLDFIQGFRPREHLPPLFRSCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFISGHKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++ LV+R+QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYEYTPSCEEITNLVARIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RGL+S++L+PKF G L +G L T G PTVE L Y ++ I DTKV GLI+ PV
Sbjct: 182 RGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLNIYNIKCIGPDTKVLGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ +S PLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAASS---PLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
R+ V+ GAGGAG+A+A+GAK +GARVVI + +E+A SLA+ + G A ED+ F+PE+
Sbjct: 358 RLVVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVSLANAIGGQALRLEDLETFRPEE 417
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVE
Sbjct: 418 GMILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVE 477
Query: 489 MFLRQAIGQFNLFTGK-EAPKEFMREI 514
MF+RQA+GQF FTG EAP+ MREI
Sbjct: 478 MFIRQAMGQFERFTGGIEAPECLMREI 504
>gi|226499578|ref|NP_001152357.1| LOC100285997 [Zea mays]
gi|195655441|gb|ACG47188.1| shikimate biosynthesis protein aroDE [Zea mays]
gi|414877457|tpg|DAA54588.1| TPA: shikimate biosynthesis protein aroDE [Zea mays]
Length = 509
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/507 (49%), Positives = 341/507 (67%), Gaps = 7/507 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+ ++VE+++++ A A G D+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++ LV+ +QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++L+PKF G L +G L T G PTVE L Y ++ I DTK+ GLI+ PV
Sbjct: 182 KGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAVIS---PLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
R+ V+ GAGGAG+A+A+GAK +GARVVI + +E+A LA+ + G A ED+ F+PE+
Sbjct: 358 RLIVVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVRLANAIGGQALRLEDLETFRPEE 417
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVE
Sbjct: 418 GMILANATSLGMYPNVDGTPIPKKALGFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVE 477
Query: 489 MFLRQAIGQFNLFTGK-EAPKEFMREI 514
MF+RQA+GQF FTG EAP+ MREI
Sbjct: 478 MFIRQAMGQFEHFTGGIEAPESLMREI 504
>gi|54290767|dbj|BAD61388.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
gi|125570444|gb|EAZ11959.1| hypothetical protein OsJ_01832 [Oryza sativa Japonica Group]
Length = 509
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/507 (50%), Positives = 348/507 (68%), Gaps = 7/507 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL++++VE + ++ A A GAD+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS
Sbjct: 62 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I +GE
Sbjct: 122 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 182 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAIS---PLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
R+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A SLA+ V G A ++ F+PE+
Sbjct: 358 RLVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEE 417
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVE
Sbjct: 418 GMILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVE 477
Query: 489 MFLRQAIGQFNLFTGK-EAPKEFMREI 514
MF+RQA+GQF FTG EAP+ MREI
Sbjct: 478 MFVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|357151512|ref|XP_003575813.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 549
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/499 (51%), Positives = 343/499 (68%), Gaps = 10/499 (2%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLI 69
T++C P A++ ++ + + A A GADV E+RLD ++ F P +DL +L K + LP L+
Sbjct: 22 TLLCVPATARAPREMAAEVAAAAALGADVAELRLDRLSGFAPRRDLPALLAKPRALPALV 81
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
YRPKW GG Y+GD+ R EAL LA +LGA+YVD ELKVA + + IVS
Sbjct: 82 TYRPKWEGGEYDGDDEPRFEALQLAMELGAEYVDIELKVADKFMKFMSGKKPEKCKLIVS 141
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAY 186
+ TPS E+LG L++++QATGADI+K+ + +I +++R+FQ+L HCQ VPII
Sbjct: 142 SHNYDNTPSAEELGSLLAQIQATGADIVKIATTATEIVDVSRMFQILVHCQEKQVPIIGL 201
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLI 244
+ +RG +S++L PKF G L +GSL KG PT L Y + I DT+VFG+I
Sbjct: 202 VMNDRGFISRVLCPKFGGYLTFGSLAKGKESAPAQPTAADLINVYNIRQIGPDTRVFGII 261
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
KPVGHSK PILHN FR V + +YVP VDDL +F +TYSSPDFAGFS P+KEA +
Sbjct: 262 GKPVGHSKSPILHNEAFRSVGMDAVYVPFLVDDLARFLTTYSSPDFAGFSCTIPHKEAAV 321
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ CDEV P+A+ I AVNTI+RR SDGKL+GYNTD +I+AIED I+ T S S
Sbjct: 322 RCCDEVDPIARDIGAVNTIVRR-SDGKLVGYNTDYVGAISAIEDGIRA---SQSTHSTAS 377
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+ LA+ + G A ++ N+
Sbjct: 378 PLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQELANLIGGPALTLSELENY 437
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
PE+G +LAN T +GMHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +V
Sbjct: 438 HPEEGMVLANTTAIGMHPNVNDTPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVV 497
Query: 485 SGVEMFLRQAIGQFNLFTG 503
SG+EMF+RQA+GQF FTG
Sbjct: 498 SGLEMFIRQAMGQFEHFTG 516
>gi|54290768|dbj|BAD61389.1| putative dehydroquinate dehydratase [Oryza sativa Japonica Group]
Length = 657
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/510 (50%), Positives = 349/510 (68%), Gaps = 8/510 (1%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCI-NNFQPGKDLEIILTKKPLP 66
+ T++C PL+A++VE + ++ A A GAD+VEIRLD I + F+P +DL +L PLP
Sbjct: 82 EEMTLLCVPLVARTVEAMRADAAAAAAAGADLVEIRLDFIGSKFRPREDLPRLLRGCPLP 141
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
++ YRP W GG YEGD+ R EAL LA +LG +YVD ELKVA + Y S +
Sbjct: 142 AIVTYRPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKL 201
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS + TPS E+L LV+R+QA GADI+K+ + NDI +++++FQ++ HCQVP+I
Sbjct: 202 IVSAHNYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGL 261
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+GE+GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I
Sbjct: 262 VMGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVI 321
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
+ PV SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K +
Sbjct: 322 ANPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAV 381
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ C E P+A++I A++TIIRRP DGKL+GYN D +I AIED I G KN +
Sbjct: 382 QCCHEHDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIEDGIGGPGSKNAAV---T 437
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PLAGR+ V+ GAGGAG+A+A+GAK +GAR+V+ + +E+A SLA+ V G A ++ F
Sbjct: 438 PLAGRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETF 497
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
+PE+G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +V
Sbjct: 498 RPEEGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVV 557
Query: 485 SGVEMFLRQAIGQFNLFT-GKEAPKEFMRE 513
SGVEMFLRQA+GQF FT G EAP+ MRE
Sbjct: 558 SGVEMFLRQALGQFERFTNGIEAPESLMRE 587
>gi|115436640|ref|NP_001043078.1| Os01g0375200 [Oryza sativa Japonica Group]
gi|113532609|dbj|BAF04992.1| Os01g0375200, partial [Oryza sativa Japonica Group]
Length = 572
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/507 (50%), Positives = 348/507 (68%), Gaps = 7/507 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL++++VE + ++ A A GAD+VEIRLD I F+P + L +L PLP L+
Sbjct: 65 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPLPALVT 124
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS
Sbjct: 125 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 184
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I +GE
Sbjct: 185 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMGE 244
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 245 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 304
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C
Sbjct: 305 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 364
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAG
Sbjct: 365 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAIS---PLAG 420
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
R+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A SLA+ V G A ++ F+PE+
Sbjct: 421 RLVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEE 480
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVE
Sbjct: 481 GMILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVE 540
Query: 489 MFLRQAIGQFNLFTGK-EAPKEFMREI 514
MF+RQA+GQF FTG EAP+ MREI
Sbjct: 541 MFVRQAMGQFEHFTGGIEAPESLMREI 567
>gi|357132175|ref|XP_003567707.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 509
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/507 (50%), Positives = 338/507 (66%), Gaps = 7/507 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+A++VE++ ++ A A G D+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVARTVEEMETDAAAAAAAGGDLVEIRLDFIEGFRPREHLPRLLHGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R E L LA +LGA YVD ELKVA + + IVS
Sbjct: 62 YRPNWEGGRYDGDDATRFETLRLAMELGAVYVDIELKVADKFINFLSGYKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYESTPSCEELANLVARIQAVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RGL+S++LSPKF G L +G L T G PTVE L Y + I DTKV GL++ PV
Sbjct: 182 RGLMSRVLSPKFGGYLTFGILDTTKTSASGQPTVEELLDIYNIRSIGPDTKVLGLVANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + V Y+ +Y+P+ DDL +F TYSSPDF+GFS P+K + C
Sbjct: 242 KQSKSPILHNKCLQSVGYDAVYLPLLADDLARFLDTYSSPDFSGFSCSLPFKVDAVHCCH 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E +A++I A+NTIIR+P DGKL+GYNTD +I+AIED I G K+ S PLAG
Sbjct: 302 EHDTVAKSIGAINTIIRKP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAVS---PLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
R+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A LA+ V G A D+ NF+PE
Sbjct: 358 RLIVVVGAGGAGKAIAYGAKKKGARVVVANRTYEKAVGLANAVGGQALRLADLENFRPEG 417
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVE
Sbjct: 418 GMILANATSLGMYPNVDGTPIPKKALSSYDVVFDAVYAPKVTRLLREAEEQGIKVVSGVE 477
Query: 489 MFLRQAIGQFNLFTGK-EAPKEFMREI 514
MF+RQA+GQF FTG EAP+ MREI
Sbjct: 478 MFVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|218188248|gb|EEC70675.1| hypothetical protein OsI_01994 [Oryza sativa Indica Group]
Length = 509
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/507 (50%), Positives = 347/507 (68%), Gaps = 7/507 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL++++VE + ++ A A GAD+VEIRLD I F+P + L +L P+P L+
Sbjct: 2 TLLCVPLVSRTVEAMQADAAAAAAAGADLVEIRLDFIEGFRPREHLPSLLRGCPIPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+GD+ R EAL LA +LG DYVD ELKVA + S + IVS
Sbjct: 62 YRPNWEGGQYDGDDATRFEALRLAMELGVDYVDIELKVADKFISFISGSKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E+L LV+R+QA G+DI+K+ + +DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYESTPSCEELADLVARIQAVGSDIVKIATTASDIADVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++LSPKF G L +G+L T + G PTV+ L Y + I DTKV GLI+ PV
Sbjct: 182 KGLMSRVLSPKFGGYLTFGTLDATKISAPGQPTVKELLDIYNIRRIGPDTKVLGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ DDL +F STYSSPDF+GFS P+K ++ C
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLADDLARFLSTYSSPDFSGFSCSLPFKVDAVQCCH 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ S PLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAAIS---PLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
R+ V+ GAGGAG+A+A+GAK +GARVV+ + +E+A SLA+ V G A ++ F+PE+
Sbjct: 358 RLVVVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLAAAVGGHALRLAELETFRPEE 417
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVE
Sbjct: 418 GMILANATSLGMYPNVDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGIKVVSGVE 477
Query: 489 MFLRQAIGQFNLFTGK-EAPKEFMREI 514
MF+RQA+GQF FTG EAP+ MREI
Sbjct: 478 MFVRQAMGQFEHFTGGIEAPESLMREI 504
>gi|356574916|ref|XP_003555589.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Glycine max]
Length = 630
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/512 (45%), Positives = 344/512 (67%), Gaps = 2/512 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ +N+T+ICA A+SVE+++ M + K GAD+VE RLD +N+F P + L ++ +PL
Sbjct: 115 VRRNSTLICASTSAESVEEMVFEMVKGKELGADLVEARLDFLNDFHPTQHLPSLINNRPL 174
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P+LI YRP W GG Y+GDE +R +AL LA +LG+++VD ELKVA +
Sbjct: 175 PILITYRPIWEGGEYDGDESQRQDALRLAIELGSEFVDVELKVADEFYKSIGGKKAESVK 234
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + TPS E++G L +R+QATGAD++K+ + DIT+ AR+FQ+L H QVP+I
Sbjct: 235 IIVSSHNLESTPSVEEIGNLAARIQATGADVVKIATTALDITDCARLFQVLVHSQVPMIG 294
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
++GE+G +S++L KF G L +GS++ + G T++ L Y I TKV G+
Sbjct: 295 IAMGEKGFISRVLCAKFGGFLTFGSIEAGAISAPGQTTIKELLDLYNFRQIGVGTKVHGV 354
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I P+GHSK P L+NP F+ V ++GIY+P+ +D++ F +TYSSPDF G+S P+K+
Sbjct: 355 IGNPIGHSKSPHLYNPAFKSVGFDGIYLPLLIDNVSDFLNTYSSPDFVGYSYTIPHKQNG 414
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
++ CDEV P+A+AI A++ +I+RP+DG+LIGYN D +I AIE+ + + + S
Sbjct: 415 LRCCDEVDPIAKAIGAISCMIKRPNDGRLIGYNFDYLGAIAAIEERLHLQDSNGRSISGC 474
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
SPL G++FV+ GAGGAG+ALA+G K +GARVV+ + + +AK LA+ V G A ++ +
Sbjct: 475 SPLYGKLFVVMGAGGAGKALAYGGKEKGARVVVANRTYAKAKELATKVGGEAITLSELES 534
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F PE+G ILAN T +GM P D P+ +E L+ Y LVFDA+YTP+ TRLL++A+ GA I
Sbjct: 535 FHPEQGMILANTTSVGMKPKIDLTPIPKEALKHYSLVFDAIYTPKLTRLLREAQETGAAI 594
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V G EMF+ QA QF +FT APK+ MR+++
Sbjct: 595 VYGTEMFINQAFMQFEMFTKLPAPKQHMRDVL 626
>gi|357475825|ref|XP_003608198.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355509253|gb|AES90395.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 506
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/502 (48%), Positives = 340/502 (67%), Gaps = 28/502 (5%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPV 67
N +IC P+M ++++++++++ +AK GAD+VEIRLD + F P +DL + + LP
Sbjct: 2 NAMLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQSG 123
L YRPKW GG+Y+GDE++RL+AL LA +L ADY+D ELKVA +I GK Y+
Sbjct: 62 LFTYRPKWEGGMYDGDENQRLDALQLAMELEADYIDVELKVAHQFYDSIRGKTYNK---- 117
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPI 183
T+ IVS + +TPS EDLG LV+R+QATGADI+K+ + +IT++AR+FQ++ H QVP
Sbjct: 118 TKVIVSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFQIMVHSQVPF 177
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVF 241
I +G+RGL+S++L KF G L +G+L+ V G PT++ L Y I +TKVF
Sbjct: 178 IGLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPNTKVF 237
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G++ KP + ++G++V + VDDL F TYSS DF GFSV P+KE
Sbjct: 238 GIVGKPT---------------IGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKE 282
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
A +K CDEV P+A++I VN ++RRP+DGKLIGYNTD +I+AIED + RG N + +
Sbjct: 283 AALKCCDEVDPVAKSIGVVNCVVRRPTDGKLIGYNTDYVGAISAIEDGL--RGKHNDSGT 340
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 421
SPL G++FV+ GAGGAG+ALA+GAK +GAR+VI + ++RA+ LA + G A D+
Sbjct: 341 AVSPLVGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDL 400
Query: 422 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 481
N+ PE G ILAN T +GM P D P+S+ L+ Y LVFDAVYTP+ TRLLK+AE +GA
Sbjct: 401 DNYHPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGA 460
Query: 482 IIVSGVEMFLRQAIGQFNLFTG 503
IV+G+EMF+ QA Q+ +TG
Sbjct: 461 TIVTGLEMFIGQAYRQYEHYTG 482
>gi|168017409|ref|XP_001761240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687580|gb|EDQ73962.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 519
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/507 (46%), Positives = 335/507 (66%), Gaps = 7/507 (1%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
+IC PL A++V+++L + AK GADV E+R+D I+ F DL ++L KPLPV++
Sbjct: 8 LICVPLTAKTVKKMLFQLELAKESGADVAELRVDLISGFDAAADLPVLLKDKPLPVIVTP 67
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R KW GG Y+G E R + L +A DLGADY+D ELKVA + + S + T I+ N
Sbjct: 68 RAKWEGGEYKGSEESRQDILRMAYDLGADYIDVELKVAGGFIQELRSRGKDSTTKIIVSN 127
Query: 132 LDCE-TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ + TPS+E++ + +M ATG DI+K V + DIT++A++F LS + P I ++G
Sbjct: 128 HNWDFTPSDEEIHATIEQMWATGGDIVKYVTTAQDITDVAQVFHFLSESKGPTIGLAMGP 187
Query: 191 RGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G++S+LL+PKF G L +G+L KG G PTV+ L + Y+V+ ++ DT V+G+I KPV
Sbjct: 188 AGMISRLLAPKFGGYLTFGALCKGQESAPGQPTVQDLIEVYRVKSMDRDTMVYGVIGKPV 247
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HSKGP+LHN F +N N +YVP+ VDD KF + ++ PDF GFSV PYKE +K CD
Sbjct: 248 YHSKGPVLHNKGFEELNLNKVYVPLLVDDFNKFMNVFNRPDFHGFSVTIPYKEDALKLCD 307
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
V A+ I AVNT++R + G+ GYNTDCE +++AIE ++ G N + PL G
Sbjct: 308 RVENAAKIIGAVNTVVRETT-GEYQGYNTDCEGALSAIEKGLRHSGLANNDET---PLKG 363
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
++FV+ GAGGAG+ALA+GAK R ARVV+ + ++ERAK+LA V G A + + +F+PE
Sbjct: 364 KLFVVIGAGGAGKALAYGAKERHARVVVANRNYERAKALAESVGGKAIELDQLSDFRPET 423
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVE 488
G ILAN+T +GM P R P+ ++ L Y LVFDAVYTP++T+LLKDA GA+ VSG E
Sbjct: 424 GMILANSTSIGMEPEVTRSPIHKDALSAYALVFDAVYTPKQTQLLKDAAEMGAVTVSGEE 483
Query: 489 MFLRQAIGQFNLFTGKEAPKEFMREIV 515
MF QA QF FT AP+ MR+++
Sbjct: 484 MFYGQAFAQFRYFTDLPAPESAMRDVI 510
>gi|356577650|ref|XP_003556937.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 479
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/470 (49%), Positives = 316/470 (67%), Gaps = 25/470 (5%)
Query: 63 KPLPVLIVYR-------PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SN 111
+P P+L+ R PK GG+Y+G E+KRL+AL LA +LGADYVD +L+VA +
Sbjct: 15 EPRPLLVYRRRNKTQQGPKLEGGMYDGGENKRLDALRLAMELGADYVDVQLQVAYEFYDS 74
Query: 112 ILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIAR 171
I GK ++ T+ IVS + TPS EDLG LV+R+QATGADI+K+ + DIT++AR
Sbjct: 75 IRGKTFNK----TKVIVSSHNYQLTPSMEDLGNLVARIQATGADIVKIATTALDITDVAR 130
Query: 172 IFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTY 229
+FQ++ H QVP I G+RGL+S +L KF G + +G+L+ V G PT++ L Y
Sbjct: 131 MFQIMVHSQVPFIGLVCGDRGLISHILCAKFGGYVTFGTLESRVVSASGQPTLKDLLYLY 190
Query: 230 KVEHIN----ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY 285
+ ++ DTKVFG+I KPV HSK PIL N F+ + NG+YV + VDDL F Y
Sbjct: 191 NLRQLSNKLTPDTKVFGIIGKPVSHSKSPILFNEVFKSIGLNGVYVFLLVDDLANFLRAY 250
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
SS +F GF V P+KEA +K CDEV P+A++I AVN I+RRP+DGKLIGYNTD ++TA
Sbjct: 251 SSTEFVGFGVTIPHKEAAIKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAVTA 310
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK 405
IED + RG NG+++ SPLA ++FV+ GA AG+ALA+GAK++GARVVI + F+RA+
Sbjct: 311 IEDGL--RGKHNGSSTTISPLASKLFVVIGADVAGKALAYGAKAKGARVVIANRTFDRAR 368
Query: 406 SLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
LA + G A D+ N+ PE G IL N T +GM P D PVS+ L+ Y LVFDAV
Sbjct: 369 ELADAIGGDALALSDLDNYHPEDGMILTNTTSIGMQPKVDEKPVSKHALKYYSLVFDAVN 428
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
TP+ TRLLK+AE +GA IV+G+EMF+ + Q+ FTG APKE R+I+
Sbjct: 429 TPKITRLLKEAEESGATIVTGLEMFMGRX--QYENFTGLRAPKELFRKIM 476
>gi|125525997|gb|EAY74111.1| hypothetical protein OsI_01996 [Oryza sativa Indica Group]
Length = 455
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 304/445 (68%), Gaps = 7/445 (1%)
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG YEGD+ R EAL LA +LG +YVD ELKVA + Y S + IVS +
Sbjct: 4 RPNWEGGQYEGDDATRFEALRLAMELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAH 63
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS E+L LV+R+QA GADI+K+ + NDI +++++FQ++ HCQVP+I +GE+
Sbjct: 64 NYESTPSCEELADLVARIQAVGADIVKIATTANDIVDVSQMFQVMVHCQVPMIGLVMGEK 123
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I+ PV
Sbjct: 124 GLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELLDIYNIRRIGPDTKVLGVIANPVK 183
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K ++ C +
Sbjct: 184 QSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQCCHK 243
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
P+A++I A++TIIRRP DGKL+GYN D +I+AIED I G KN + PLAGR
Sbjct: 244 HDPVAKSIGAISTIIRRP-DGKLVGYNNDYIGAISAIEDGIGGPGSKNAAVT---PLAGR 299
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 429
+ V+ GAGGAG+A+A+GAK +GAR+V+ + +E+A SLA+ V G A ++ F+PE+G
Sbjct: 300 LLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFRPEEG 359
Query: 430 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 489
ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VSGVEM
Sbjct: 360 MILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEM 419
Query: 490 FLRQAIGQFNLFT-GKEAPKEFMRE 513
FLRQA+G FT G EAP+ MRE
Sbjct: 420 FLRQALGPLERFTNGIEAPESLMRE 444
>gi|224128596|ref|XP_002320371.1| predicted protein [Populus trichocarpa]
gi|222861144|gb|EEE98686.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/343 (65%), Positives = 277/343 (80%), Gaps = 9/343 (2%)
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTK 239
Q+P+IA +VG RGL+SQLL PKF G LVYGSL V G+PT+ SLRQ YK+E+INADTK
Sbjct: 1 QIPLIALAVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTK 60
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFGLIS PVGHSKGP+LHNP FRH YNGIYVPM VDD+K+FF TY+S DFAGFSVG P+
Sbjct: 61 VFGLISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPH 120
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA + CDEVHPLA++I AVNTI+RRP+DGKL+GYNTDC+ASI+AIEDA+ GT
Sbjct: 121 KEAAVGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDAL------TGT 174
Query: 360 ASF---GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
SPL+G+ FVL GAGGAGRALAFGAKSRGARV+IF+ ++ERA++LA V G A
Sbjct: 175 KLIILVPSPLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEAL 234
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
P+E + F+P G ILANA+ +GM PN+D+ PVS+ETL+ +LVFDAVYTPR TRLL++A
Sbjct: 235 PYESLDRFRPVNGMILANASAIGMEPNSDQSPVSKETLKACELVFDAVYTPRNTRLLQEA 294
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+ A++VSGVEMF+RQA+GQF LFTG AP+ FMR++VL +F
Sbjct: 295 KEVVAVVVSGVEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF 337
>gi|194694678|gb|ACF81423.1| unknown [Zea mays]
Length = 428
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/428 (53%), Positives = 293/428 (68%), Gaps = 7/428 (1%)
Query: 96 DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGAD 155
+LGA+YVD ELKVA + + IVS + TPS E+L LV+++QATGAD
Sbjct: 2 ELGAEYVDVELKVADKFMKLISGRKPDNCKLIVSSHNYETTPSSEELANLVAQIQATGAD 61
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGERGLVSQLLSPKFNGALVYGSLK 212
I+K+ + +I ++A++FQ+L HCQ VPII + +RG +S++L PK+ G L +GSLK
Sbjct: 62 IVKIATTATEIVDVAKMFQILVHCQEKQVPIIGLVMNDRGFISRVLCPKYGGFLTFGSLK 121
Query: 213 G--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY 270
PT L Y + I DTKVFG+I KPVGHSK PILHN FR V +N +Y
Sbjct: 122 KGKESAPAQPTAADLINLYNIRQIGPDTKVFGIIGKPVGHSKSPILHNEAFRSVGFNAVY 181
Query: 271 VPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG 330
VP VDDL KF TYSSPDFAGFS P+KEA ++ CDEV P+A+ I AVNTI+RRP DG
Sbjct: 182 VPFLVDDLAKFLDTYSSPDFAGFSCTIPHKEAAVRCCDEVDPVARDIGAVNTIVRRP-DG 240
Query: 331 KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390
KL+GYNTD +I+AIED IK T SPLAGR+FV+ GAGGAG+ALA+GAK +
Sbjct: 241 KLVGYNTDYVGAISAIEDGIKA-SESEPTDPDKSPLAGRLFVVIGAGGAGKALAYGAKEK 299
Query: 391 GARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS 450
GARVVI + F RA+ LA+ + G A D+ N+ PE+G ILAN T +GMHPN + P+S
Sbjct: 300 GARVVIANRTFARAQELANLIGGPALTLADLENYHPEEGMILANTTAIGMHPNVNETPLS 359
Query: 451 EETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 510
++ LR Y +VFDAVYTP++TRLL++A GA +VSG+EMF+RQA+GQF FTG AP
Sbjct: 360 KQALRSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFEHFTGMPAPDSL 419
Query: 511 MREIVLAK 518
MR+IVL K
Sbjct: 420 MRDIVLTK 427
>gi|226494502|ref|NP_001140289.1| uncharacterized protein LOC100272333 [Zea mays]
gi|194698862|gb|ACF83515.1| unknown [Zea mays]
gi|414878214|tpg|DAA55345.1| TPA: hypothetical protein ZEAMMB73_777854 [Zea mays]
Length = 532
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 308/474 (64%), Gaps = 11/474 (2%)
Query: 52 PGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVAS 110
P +DL ++L + + LPV++ YRP W GG Y G++ R EAL LA +LGA+YVD E KVA
Sbjct: 61 PCRDLPVLLAQPRSLPVIVTYRPNWEGGQYAGEDEPRFEALLLAMELGAEYVDVEFKVAD 120
Query: 111 NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIA 170
+ + I+S TPS +L LV++++ATGADI+K+ + DI + +
Sbjct: 121 KFMKYLSGKKPQNCKLIISAYDYKTTPSVHELLNLVAQIRATGADIVKIETTAADIVDTS 180
Query: 171 RIFQLLSHC---QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESL 225
R+FQ+L+HC QVPII E G +S+++ K+ G L + SL+ PTV L
Sbjct: 181 RMFQVLAHCHEKQVPIIGLVRKEHGFISRIICAKYGGYLTFASLENGKESTTEQPTVADL 240
Query: 226 RQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY 285
YK+ I DTKVFG+I PV HSK PI+ N FR V ++ +++P DDL +F T+
Sbjct: 241 INKYKIRQIGPDTKVFGIIGNPVSHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVQFLYTF 300
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
S+PD+AGFS P+KE ++ CD+V P+A+ I A+NTIIRRP DGKL+GYNTD +I+A
Sbjct: 301 SAPDYAGFSCTMPHKETALRCCDDVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISA 359
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK 405
IED I+ T S SPLAGR+FV+ GAGGAG+ALA+GAK +GARVVI + F RA+
Sbjct: 360 IEDGIRA---SQPTDSITSPLAGRLFVVIGAGGAGKALAYGAKEKGARVVIANRTFARAQ 416
Query: 406 SLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
LA + G A ++ ++ PEKG ILANAT +GMHPN D P+S+ L+ Y +VFDAV+
Sbjct: 417 ELAHIIGGTALTLSELESYHPEKGMILANATSVGMHPNVDETPLSKHALKSYAVVFDAVF 476
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFT-GKEAPKEFMREIVLAK 518
PR+TRLL++A GA ++ G+EM +R + QF LFT G AP+ MRE +L K
Sbjct: 477 VPRETRLLREAAVCGATVIDGLEMLIRLVMVQFKLFTGGMTAPERLMREAILTK 530
>gi|397911050|gb|AFO68801.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 377
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/386 (51%), Positives = 268/386 (69%), Gaps = 14/386 (3%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
IC PL A+SV+++L M +AK G D+VE+RLD + +F P +DLE ++ + PLP + +R
Sbjct: 2 ICVPLTAESVDEMLIGMRKAKESGVDLVEVRLDFLKSFNPPQDLEFLIKECPLPTIFTFR 61
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
PKW GG Y+G+E+KRL+AL LA +LGADY+D EL+VA + + IVS +
Sbjct: 62 PKWEGGQYDGEENKRLDALRLAMELGADYIDVELQVAREFNNSISAKKPEKFKVIVSSHN 121
Query: 133 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERG 192
TPS EDLG LV+++QATGADI+K+ + DIT++ARIFQ+ H QVPII +GERG
Sbjct: 122 YENTPSVEDLGNLVAKIQATGADIVKIATTALDITDVARIFQITVHSQVPIIGLVMGERG 181
Query: 193 LVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGH 250
L+S+LL PKF G L + +L+ V G PT+ L Y I DTKVFG+I KPVGH
Sbjct: 182 LISRLLCPKFGGYLTFATLEAGKVSAPGQPTINDLLNVYNFRLIGPDTKVFGIIGKPVGH 241
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
SK P+L+N F+ + +NG+YV + VDD+ KF TYSS DF GFSV P+KE +K C+EV
Sbjct: 242 SKSPLLYNSAFKSIGFNGVYVHLLVDDIAKFLQTYSSTDFVGFSVTIPHKENAVKCCNEV 301
Query: 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
P+A++I AVN II+R SDGKL GYNTD +I+AIED ++ SPLAG++
Sbjct: 302 DPVAKSIEAVNCIIKRQSDGKLFGYNTDYVGAISAIEDGLR------------SPLAGKL 349
Query: 371 FVLAGAGGAGRALAFGAKSRGARVVI 396
FV+ GAGGAG+ALA+GAK++GARVVI
Sbjct: 350 FVVIGAGGAGKALAYGAKAKGARVVI 375
>gi|255070969|ref|XP_002507566.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
gi|226522841|gb|ACO68824.1| dehydroquinate dehydratase [Micromonas sp. RCC299]
Length = 517
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 311/514 (60%), Gaps = 21/514 (4%)
Query: 18 MAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAG 77
MA+++E++ +A GAD+VE+R+D + +F +D+ ++L +P ++ YRP W G
Sbjct: 1 MAEALEEI----DEAIVAGADIVELRIDFLRDFIAARDVRVLLDACSVPCIVTYRPTWEG 56
Query: 78 GLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS--HQSGTRFIVSCNLDCE 135
G Y+GDE RL L A +LGA YVD EL+ A + + +S T+ I+S + +
Sbjct: 57 GQYKGDEQHRLSVLWTAVELGAAYVDCELRAAGHFFAAAPNGVRERSTTKIILSSHNYDD 116
Query: 136 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP----IIAYSVGER 191
PSE +L + ++ GADI+K+ V DIT+IAR+ LL+ + I +GE
Sbjct: 117 VPSEVELDEIHAQCVVAGADIVKIAAMVKDITQIARLENLLARAKSATGHKTIVLGMGEA 176
Query: 192 GLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G VS+LL+ KF L +G+L+ G PT+ LR Y+++ + +TKV G+I P+
Sbjct: 177 GQVSRLLAAKFGSFLTFGALRSGAESAPGQPTLSQLRDIYRLQKQSTNTKVMGVIGNPIS 236
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFAGFSVGFPYKEAVMKFC 307
SK P+LHN + + YVP+ V D++KF ST + S F GFSV P+KE+ + C
Sbjct: 237 QSKSPVLHNISLEAAGLDACYVPLLVSDIRKFLSTPLFVSDSFTGFSVTIPHKESAVMCC 296
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
+E+ P+A+ I AVNT++R P +GK GYNTD A++ AIE A + L
Sbjct: 297 EELDPVAKKIGAVNTLVRLP-NGKFKGYNTDYSAAVRAIERAYTSH-LDGDMRDSETILR 354
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ V+ GAGGAGR+LAFGA +GA +++I + FERAK+LA+ G A +++ +
Sbjct: 355 GKTIVVVGAGGAGRSLAFGAAFKGAGKIIIANRSFERAKALAAACGGEAVALDELRD-GA 413
Query: 427 EKGAILANATPLGMHPNT-DRVPVSEETLR--DYQLVFDAVYTPRKTRLLKDAEAAGAII 483
KG +LAN T LGM+P++ D PV +E L+ +++VFDAVY P +TRLL++A+ G
Sbjct: 414 LKGDVLANTTSLGMYPDSVDETPVPKEALQAAGFKVVFDAVYNPLETRLLREAKECGCTQ 473
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
SG++MF+ QA QF LFTGK+A + MR+ VLA
Sbjct: 474 ASGLDMFVGQAAQQFELFTGKKAAESLMRKAVLA 507
>gi|302842835|ref|XP_002952960.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
gi|300261671|gb|EFJ45882.1| hypothetical protein VOLCADRAFT_82062 [Volvox carteri f.
nagariensis]
Length = 564
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 216/526 (41%), Positives = 316/526 (60%), Gaps = 27/526 (5%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
IC + A V++ ++ + +A A G D++E+RLD + +F P + L+ I + PLP ++ YR
Sbjct: 24 ICTSVTATKVDEFIAEIQEAAASGVDIIELRLDFLTDFDPEQHLQRITSSCPLPYIVTYR 83
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS-----GTRFI 127
P W GG Y+G E +RL L +A +GA YVD E K + + Q T+ I
Sbjct: 84 PVWEGGKYDGPEPERLAVLKMAALMGAPYVDVEFKASPYFFAGETGWSQGRAVPLSTKVI 143
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+S + +TP L L S M+A GADI+KL NDIT+ AR+ LL P+IA S
Sbjct: 144 LSYHDFQQTPEPAVLDRLASAMRAAGADIVKLAAMANDITDAARMLDLLRKKDGPMIALS 203
Query: 188 VGERGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+GE+G + +LL+ K+ G L + ++ + G P + L + +TKV+G+I
Sbjct: 204 MGEKGQIVRLLAAKYGGYLTFAAMSPERASAPGQPDIGKLAGLFGYRRQGPETKVYGIIG 263
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPYKEAVM 304
PV HSK P++HN F+HV ++G+YVP+ VDDL++F + + DFAGFSV P+KEA +
Sbjct: 264 NPVSHSKSPLIHNTAFQHVGFDGVYVPLLVDDLERFLTAFKDHEDFAGFSVTIPHKEAAL 323
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG- 363
+ EV P+A+ I AVNT++R+P DG G+NTD A+I+AIE + + G A+ G
Sbjct: 324 RLATEVDPVARQIGAVNTLVRQP-DGSFKGFNTDWLAAISAIEHGVAG---EPGRAAAGA 379
Query: 364 ----------SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
SPL G+ V+ GAGGAGRALAFGA ++GARVVI + E+A LA+ +
Sbjct: 380 VEEAPVAGGKSPLQGKTVVVIGAGGAGRALAFGAATKGARVVIANRSREKADLLAAALGS 439
Query: 414 AAR--PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+A +ED+++ + G +LAN+T LGM P+ + PV E Y++VFDAVY P TR
Sbjct: 440 SATSCSWEDLVSGR-VTGDVLANSTSLGMTPHVEESPVGPEVAAKYKVVFDAVYNPLWTR 498
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVL 516
LL+DA A GA+ V G++MF+ QA+ QF LFTG E P M + V+
Sbjct: 499 LLQDARAGGAVPVDGLQMFVGQALEQFRLFTGGLEPPAALMEKTVM 544
>gi|397911052|gb|AFO68802.1| shikimate dehydrogenase, partial [Gunnera manicata]
Length = 355
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 247/368 (67%), Gaps = 15/368 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
++C PLM +V+Q+L M +AK GAD+VEIRLDC+ F PG+ L I++ + PLP L+ Y
Sbjct: 1 LLCTPLMGTTVDQMLLEMRKAKDIGADLVEIRLDCLRTFNPGQVLNILIKQCPLPTLVTY 60
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP W GG YEGDE+KR +AL LA +LGA YVD EL+VA++ + G + IVS +
Sbjct: 61 RPVWEGGQYEGDENKRQDALRLAMELGAAYVDIELEVANDFNNSIAAKKPDGFKIIVSSH 120
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TPS E +G LV+R+QATGADI+K+ + DIT+ ARIFQ+ + Q+P+I +GER
Sbjct: 121 NFHNTPSLEGIGNLVARIQATGADIVKIATTALDITDCARIFQITVNSQIPMIGIVMGER 180
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL+S++LSPKF G L +G+L+ + G PT + L + Y IN DTKV+G+I KPVG
Sbjct: 181 GLISRILSPKFGGYLTFGALEAGAISAPGQPTAKDLVELYNFRLINPDTKVYGIIGKPVG 240
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
HSK P+L N +++ + N +YV + VDD++KFF+TYS+ DF GFS P+KEA +K E
Sbjct: 241 HSKSPLLFNESWKSIGLNSVYVHLLVDDVEKFFATYSALDFFGFSCTIPHKEAALKCMAE 300
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ P+A+ I A+N I++RP DGK YNTD +I IED ++ SPLAG+
Sbjct: 301 IDPIAKKIGAINNIVKRP-DGKFKAYNTDYIGAIAGIEDELR------------SPLAGK 347
Query: 370 MFVLAGAG 377
+FV+ GAG
Sbjct: 348 LFVVLGAG 355
>gi|255542474|ref|XP_002512300.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
gi|223548261|gb|EEF49752.1| 3-dehydroquinate dehydratase, putative [Ricinus communis]
Length = 368
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 240/346 (69%), Gaps = 2/346 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+ICAP+MA+SV+ +L + +AK GAD+VEIR+D + NF P +DLEI++ + LP
Sbjct: 21 RNSTLICAPVMAKSVDGMLVQINKAKELGADLVEIRVDFLENFSPIQDLEILIKQSALPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
LI YRPKW G Y+GDE KR EAL LA +LG+D++D ELKVA + I
Sbjct: 81 LITYRPKWEVGEYDGDESKRQEALRLAIELGSDFIDVELKVAPEFFNSIQGKKPEKVKII 140
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS E++ LV+++Q+TGADI+K+ + DIT+ AR+FQ+L H QVP+I
Sbjct: 141 VSSHNYENTPSVEEIANLVAKIQSTGADIVKVATTALDITDNARMFQVLVHAQVPMIGIV 200
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++L+ KF G L +GS++ V G PT+ L Y + I ADTKV G+I
Sbjct: 201 MAERGLMSRILAAKFGGFLTFGSIEAGVVSAPGQPTITDLLDLYNLRQIGADTKVHGVIG 260
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
P+GHSK P L+N F+ V +NGIY+P+ VD++ + STYSS DF G+S P+KEA +K
Sbjct: 261 NPIGHSKSPHLYNSAFKSVRFNGIYLPLLVDNVANYISTYSSSDFVGYSYTIPHKEAGLK 320
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
CDEV P+AQAI A++ +IRRPSDGKL+GYN D +I AIE+A++
Sbjct: 321 CCDEVDPIAQAIGAISCMIRRPSDGKLMGYNVDYLGAIGAIEEALR 366
>gi|414877458|tpg|DAA54589.1| TPA: hypothetical protein ZEAMMB73_882303 [Zea mays]
Length = 401
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/388 (48%), Positives = 257/388 (66%), Gaps = 6/388 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T++C PL+ ++VE+++++ A A G D+VEIRLD I F+P + L +L PLP L+
Sbjct: 2 TLLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + IVS
Sbjct: 62 YRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVSS 121
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ TPS E++ LV+ +QA GADI+K+ + DI +++R+FQ++ HCQVP+I + E
Sbjct: 122 HNYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMSE 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPV--LGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
+GL+S++L+PKF G L +G L T G PTVE L Y ++ I DTK+ GLI+ PV
Sbjct: 182 KGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANPV 241
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
SK PILHN + + YN +Y+P+ D+L F TYSSPDF+GFS P+K ++ CD
Sbjct: 242 KQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCCD 301
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E P+A++I A+NTIIRRP DGKL+GYNTD +I+AIED I G K+ SPLAG
Sbjct: 302 EHDPVAKSIGAINTIIRRP-DGKLVGYNTDYIGAISAIEDGIGGPGSKDAVI---SPLAG 357
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVI 396
R+ V+ GAGGAG+A+A+GAK +GARVVI
Sbjct: 358 RLIVVVGAGGAGKAIAYGAKEKGARVVI 385
>gi|145352721|ref|XP_001420686.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580921|gb|ABO98979.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 526
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 220/527 (41%), Positives = 314/527 (59%), Gaps = 27/527 (5%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP----GKDLEIILTKK 63
K TT + AP ++E L ++ A +GADVVE+R+D + + G +E ++
Sbjct: 10 KLTTSVIAP----NLELALRDVDDAVRKGADVVELRVDFLRDDAARGTLGDAIEALIKAS 65
Query: 64 PLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS---H 120
P+PV++ RP W GG +GDE RLEAL A + GA YVD E A + ++
Sbjct: 66 PVPVIVTNRPTWEGGQDDGDESARLEALWRAHECGAAYVDCEALAAERFFAAKPATATLR 125
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC- 179
T+ I+S + ETP++E L + ++ GADI+K+ N + ++AR+ +LL
Sbjct: 126 NGKTKIILSSHNYDETPNDEILAEIHAKCVRLGADIVKMASVCNAVEDVARLEKLLRTKG 185
Query: 180 -QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEHI 234
++ I + E G VS+LL+ KF L +G+++ P G P +E LR Y+V
Sbjct: 186 REIETIVLGMSEHGQVSRLLAAKFGSFLTFGAIRRGEESAP--GQPLLEELRDLYRVPTQ 243
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFAG 292
A TKV G+I P+GHSK P LHNP + YVP+ V D+K F ++ + S DF G
Sbjct: 244 TAATKVMGVIGNPIGHSKSPALHNPCLAAAGVDACYVPLLVKDIKTFLASPLFGSKDFVG 303
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
FSV P+KE ++ C EV P+A+ I AVNT++R+P DG L GYNTD A+I AIE+A+++
Sbjct: 304 FSVTIPHKEDALECCAEVDPVAKQIGAVNTLVRQP-DGSLKGYNTDYVAAIEAIENAMEK 362
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 412
K G A+ S LAG+ V+ GAGGAG+ALAFGAK +GA VVI + ERA++LA
Sbjct: 363 ---KTGVAAAKS-LAGKTVVVIGAGGAGKALAFGAKFKGANVVIANRSVERAQALADACG 418
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
G A ED+ + G +LAN+T +GM PN + P L + +VFDAVYTP +TRL
Sbjct: 419 GVAVSLEDLASGSV-VGDVLANSTSVGMQPNVEDTPTPASVLGGFSVVFDAVYTPLETRL 477
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L++A+A+G I SG++MF+ QA QF LFTGKEA E MR+ VL+
Sbjct: 478 LREAKASGCEIASGLDMFVGQAARQFELFTGKEAEVELMRDAVLSSI 524
>gi|159472414|ref|XP_001694346.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
gi|158277009|gb|EDP02779.1| dehydroquinate dehydratase [Chlamydomonas reinhardtii]
Length = 554
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 218/518 (42%), Positives = 309/518 (59%), Gaps = 19/518 (3%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
+ IC + A +VE L+ + +A A G D++E+RLD + +F P + LE I+ PLP ++
Sbjct: 35 SYICTSVTATTVESFLAEIQEAAASGVDIIELRLDFLTDFDPEQHLEKIIKACPLPYIVT 94
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG YEG E +RL L +A +GA YVD E K + + S T+ I+S
Sbjct: 95 YRPVWEGGKYEGPEPERLAVLKMAALMGAPYVDVEFKASPYFFADPHEVPLS-TKVILSY 153
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ +TP L L + M+ GADI+KL NDI + AR+ LL + P+IA S+GE
Sbjct: 154 HDFKQTPDAAVLNKLATAMRQAGADIVKLAAMANDIGDAARMLDLLRNKDGPMIALSMGE 213
Query: 191 RGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RG + +LL+ K+ G L + ++ + G P + L + +A TKVFG+I PV
Sbjct: 214 RGQIVRLLAAKYGGHLTFAAMSPERASAPGQPDIGRLAGLFNYRKQSAATKVFGIIGNPV 273
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPYK--EAVMK 305
SK P++HN F+H+ ++G+YVP+ VDDL++F + + DFAGFSV P+K EA ++
Sbjct: 274 AQSKSPLIHNTAFQHIGFDGVYVPLLVDDLERFLAAFKDYDDFAGFSVTIPHKVREAALR 333
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
+V P+A I AVNT+IR+ +DG GYNTD EA+I+AIE + GT + SP
Sbjct: 334 AAKDVDPVAAQIGAVNTLIRQ-ADGSFKGYNTDWEAAISAIERGLAGNA---GTPAAESP 389
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR-------PF 418
L GR V+ GAGGAGRALAFGA +RGARV+I + +RA +LA+ + +
Sbjct: 390 LKGRTVVVIGAGGAGRALAFGAAARGARVLIANRSRDRADALAAALAAQYGSAAAAAVSY 449
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
ED+ + G +LAN+T +GM PNT+ PV +++VFDAVY P TRLL DA+A
Sbjct: 450 EDLAGGR-VVGDVLANSTSVGMAPNTEESPVPAAVAGQFKVVFDAVYNPLWTRLLLDAKA 508
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFT-GKEAPKEFMREIV 515
GA V G++MF+ QA+ QF LFT G E P E M V
Sbjct: 509 GGATPVDGLQMFVGQALEQFRLFTGGSEPPAELMERTV 546
>gi|386813870|ref|ZP_10101094.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403367|dbj|GAB63975.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 492
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/510 (37%), Positives = 291/510 (57%), Gaps = 24/510 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC P++A ++E L ++ +A +E AD+VE+R+D I + +L+ +L PV++
Sbjct: 1 MICVPIIADNLEDALKDIAEA-SEVADIVELRIDYIKDL----NLKRLLKGCIKPVIVTN 55
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
RP GG + G E R+ L LA +L DY+D E + ++ T+ IVS +
Sbjct: 56 RPVREGGKFTGSEEDRISLLKLAVELQVDYIDVEHDSIQKV------NNTGKTKRIVSYH 109
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
+TP +DL + R++ +GADIIK+V N IT+ +I+QLL +P I++ +GE
Sbjct: 110 NFDKTP--DDLTGIFQRLKQSGADIIKIVPYANGITDNVKIYQLLQQVDMPTISFCMGEY 167
Query: 192 GLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G++S++L KF L + SL+ G ++ L TY V + T ++GLI PV
Sbjct: 168 GIISRILYKKFGSYLTFASLQSGKESAPGQVSIHELLNTYHVRRQDKHTSIYGLIGNPVS 227
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
HS P +HN F+ + ++ IYVP VD + F + D G+SV P+KE+VM D
Sbjct: 228 HSISPAIHNTLFKEMGFHNIYVPFKVDTIGNFIREFRGLDIKGYSVTIPHKESVMGHLDG 287
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ +A+ I AVNTI+ R DG+LIG+NTDCEA++ +ED +G A+ L G+
Sbjct: 288 IDQIAKKIGAVNTIVNR--DGRLIGFNTDCEAAVRVLEDI----NNVSGMAAKAGSLQGK 341
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKG 429
L GAGG RA+AFG K R A++ IF+ ++ERA+SLA +V R F D+ + +
Sbjct: 342 KVTLFGAGGVARAIAFGLKEREAQITIFNRNYERAQSLACEVDCFYRKFSDLPALEAD-- 399
Query: 430 AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEM 489
I+ NAT +GM P+ P+ + L+ +VFD VY P +TRLL+DA++ G V G+ M
Sbjct: 400 -IVVNATSVGMFPSVHETPIDKNYLKPNMIVFDTVYNPPETRLLRDAKSLGCRTVGGLSM 458
Query: 490 FLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
F+ QA Q+ L+TG+ E + +I K
Sbjct: 459 FVHQAAAQYKLWTGQMPSLELIEKIAYKKL 488
>gi|308810206|ref|XP_003082412.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
gi|116060880|emb|CAL57358.1| putative dehydroquinate dehydratase (ISS) [Ostreococcus tauri]
Length = 809
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 221/528 (41%), Positives = 309/528 (58%), Gaps = 33/528 (6%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKD-LEIILTKKPLP 66
K TT + AP SV L ++ +A GADVVE+R+D + + G++ E +L K P
Sbjct: 298 KLTTSVVAP----SVPIALLDVEEAIELGADVVELRMDFLE--RRGREATEALLRKCERP 351
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG--- 123
++ RP W GG +GDE +RL++L A +LGA YVD EL A + S +SG
Sbjct: 352 AIVTNRPIWEGGRNDGDEDERLDSLWEAYELGAAYVDCELLAAERFFARAPDSFKSGGNG 411
Query: 124 -TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV- 181
T+ I+S + ETPS+ +L + + A GADI+K+ +I ++ R+ +LL
Sbjct: 412 KTKIILSSHNYEETPSDVELAKIHAACVAAGADIVKIACVCKEIEDVERLERLLRERGGE 471
Query: 182 -PIIAYSVGERGLVSQLLSPKFNGALVYGSLK-------GTPVLGLPTVESLRQTYKVEH 233
IA + E G VS+LL+ KF L +G+++ G P+LG LR Y+V
Sbjct: 472 KETIALGMSEHGQVSRLLAAKFGSYLTFGAIRRGAESAPGQPLLG-----ELRDMYRVPT 526
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST--YSSPDFA 291
+ TKV G+I P+GHSK P LHNP N + YVP+ V D+K+F ++ + S DF
Sbjct: 527 QTSSTKVMGVIGNPIGHSKSPALHNPCLAAANVDACYVPLLVKDIKQFLASPLFGSEDFV 586
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+KEA ++ C EV P+A+ I AVNT++R+P DG L GYNTD A+I AIE A++
Sbjct: 587 GFSVTIPHKEAALEACAEVDPVAKQIGAVNTLVRQP-DGSLKGYNTDYAAAIDAIEVAME 645
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ K GT + L G+ V+ GAGGAG+ALAFGAK +GA V+I + ERA++LA
Sbjct: 646 K---KTGTPA-AKALEGKTVVVIGAGGAGKALAFGAKFKGANVIIANRSVERAQALADAC 701
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
G A ED+ + G +LAN T +GM P P L D+ +VFDAVYTP TR
Sbjct: 702 GGRAVSLEDLAEGR-ASGDVLANTTSVGMQPYIAESPAPASVLGDFSVVFDAVYTPLDTR 760
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL++A+ AG I SG++MF+ QA QF LFTG+ A MRE VL+
Sbjct: 761 LLREAKEAGCEIASGLDMFVGQAARQFELFTGETADISLMREAVLSSM 808
>gi|7488788|pir||S48698 3-dehydroquinate dehydratase (EC 4.2.1.10) / shikimate
5-dehydrogenase (EC 1.1.1.25) precursor - garden pea
(fragment)
Length = 325
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 225/328 (68%), Gaps = 11/328 (3%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLP 66
KN T+IC P+M ++VE+++ ++ +AK GAD+VEIRLD ++ F P +DL + + LP
Sbjct: 2 KNATLICVPIMGETVEKMVVDIQKAKLNGADLVEIRLDSLSTFNPHQDLNTFIQQHHSLP 61
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA----SNILGKQYSSHQS 122
L YRP W GG Y+GDE++RL+AL LA +LGADYVD ELKVA +I GK ++
Sbjct: 62 FLFTYRPIWEGGKYDGDENRRLDALRLAVELGADYVDIELKVAHEFYDSIRGKMFNK--- 118
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
T+ IVS + TPS EDLG LV+R+QATGADI+K+ + +IT++AR+FQ+L H QVP
Sbjct: 119 -TKVIVSSHNYQYTPSVEDLGDLVARIQATGADIVKIATTAVEITDVARMFQILVHSQVP 177
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKV 240
I +G+RGLVS++L KF G L +G+L+ V G PT++ L Y + +TKV
Sbjct: 178 FIGLVMGDRGLVSRVLCAKFGGYLTFGTLESGVVSAPGQPTIKDLLHLYNFRQLGPETKV 237
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+G+I KPV HSK PIL N F+ V +NG++V + VDDL F TYSS DF GFSV P+K
Sbjct: 238 YGIIGKPVSHSKSPILFNEAFKTVGFNGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHK 297
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPS 328
E+ +K CDEV P+A++I AVN I+R P+
Sbjct: 298 ESALKCCDEVDPVAKSIGAVNXIVRXPT 325
>gi|303272087|ref|XP_003055405.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463379|gb|EEH60657.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 493
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 206/499 (41%), Positives = 289/499 (57%), Gaps = 18/499 (3%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP-GKDLEIILTKKPLPVLIVYRPKW 75
++A +V + L+ + +A A GAD+VE+R+D I GKDL +L + P+P ++ YRP W
Sbjct: 1 VIAPTVAEALTEIDEAVAGGADIVELRVDFIPTLDADGKDLTAMLERCPVPCIVTYRPTW 60
Query: 76 AGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYS--SHQSGTRFIVSCNLD 133
GG Y G+E RL AL A +LGA YVD EL A S T+ I+S +
Sbjct: 61 EGGQYAGEEEPRLAALWKAVELGAAYVDCELLAAERFFAAAPPGIKDASATKIILSSHDY 120
Query: 134 CETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYSVGE 190
PS ++L + +R A GAD++K+ V DI ++ R+ LL + I +GE
Sbjct: 121 DAVPSYDELAEIRARCVAAGADVVKIAAMVKDIVDVTRLQTLLEDAAGSRQDTIVLGMGE 180
Query: 191 RGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G VS+LL+ KF L +G+L+ G PT+ LR Y+V TKV G+I P+
Sbjct: 181 AGQVSRLLAAKFGSFLTFGALRAGAESAPGQPTLRQLRDLYRVPTQTRATKVMGVIGNPI 240
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFF--STYSSPDFAGFSVGFPYKEAVMKF 306
SK P LHNP+ + YVP+ V+D++ F +T+ D+ GFSV P+KEA ++
Sbjct: 241 AQSKSPALHNPSLAAAGVDACYVPLLVNDIEAFLKSATFGGDDYVGFSVTIPHKEAALRC 300
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
CDEV P+A I AVNT+++RP DG GYNTD A+I AIE A+ K GTAS G L
Sbjct: 301 CDEVDPVAAEIGAVNTLVKRP-DGTFKGYNTDYVAAIDAIEAAMNA---KRGTAS-GEVL 355
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ V+ GAGGAGR LAFGAK +GA V++ + +RA++LA+ G A E L
Sbjct: 356 RGKTVVVVGAGGAGRGLAFGAKFKGADVIVANRSLDRAQALATACGGVAVTLE-ALASGA 414
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLR--DYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
KG +LAN T +GM P D P + + + +VFDAVY P +T+LL+DA+ G +
Sbjct: 415 VKGDVLANTTSVGMTPKVDETPTPKSAIAAGGFDVVFDAVYNPLETKLLRDAKEVGCELA 474
Query: 485 SGVEMFLRQAIGQFNLFTG 503
SG++MF+ QA QF LFTG
Sbjct: 475 SGLDMFVGQAALQFELFTG 493
>gi|91200495|emb|CAJ73543.1| similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Candidatus Kuenenia stuttgartiensis]
Length = 499
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/510 (35%), Positives = 290/510 (56%), Gaps = 19/510 (3%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N MIC P++A + + +M + ++ AD VE+R+D I++ +L IL K PV
Sbjct: 2 QNKPMICVPIVANNNNDAIHDM-ECASKIADAVELRIDYIHDL----NLRQILGKCTKPV 56
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ-SGTRF 126
++ RP GG + G E +RL+ L A L ADYVD E N+ + S T+
Sbjct: 57 IVTNRPVREGGKFRGTEEERLQLLKQAIQLQADYVDIEHDSIRNVKKNGNALFAASKTKI 116
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IVS + ETP E+L + + + +GADI+K+V N IT+ +I+QLL ++PII++
Sbjct: 117 IVSYHNFRETP--ENLSEIYNTLFQSGADIVKIVTHANSITDNIKIYQLLQQSKIPIISF 174
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL-KGTPVL-GLPTVESLRQTYKVEHINADTKVFGLI 244
+GE G++S++L F L + SL KG G +E L Y +++ N T V+GLI
Sbjct: 175 CMGEYGIISRILYKIFGSYLTFASLQKGKESAPGQINIEELLNRYNIKNQNKHTAVYGLI 234
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
PV HS P++HN F+ + N +YVP VD++ +F S + + +G+SV P+KE+++
Sbjct: 235 GNPVSHSISPVIHNALFKEIGMNCVYVPFKVDEIGRFISEFKKLNISGYSVTIPHKESII 294
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
+ D+ P+A+ I AVNT++ + + +LIG+NTD EA++T + + G+ A F +
Sbjct: 295 NYLDDADPIAKKIGAVNTVVNK--NNRLIGFNTDLEAAVTVLAEVANVSGHTAADACFKN 352
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
+ + GAGG RA+AFG K GA + + + R +SLA +V G + F +
Sbjct: 353 ----KHVTIIGAGGVARAIAFGLKMYGADITLVSRNHNRMQSLAGEV-GCS--FTNKNGL 405
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
Q + I NATP+GM+P+ + PV + L+ +VFD +Y P +T+L+KDA+ G V
Sbjct: 406 QNLETDIFVNATPVGMYPSINETPVDRKLLKPNMIVFDTIYNPPETKLIKDAKEIGCKTV 465
Query: 485 SGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
G+ MF+RQA QF L+T E P + I
Sbjct: 466 GGMPMFIRQAAAQFRLWTDTEPPLNIIENI 495
>gi|192758420|gb|ACF05190.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Spirogyra
varians]
Length = 520
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 314/527 (59%), Gaps = 34/527 (6%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVL 68
N ++CA L ++VE++ S + ++K+EGAD VEIRLD I+ F+ L+ + + P ++
Sbjct: 4 NPCIVCAELTGKNVEEIKSQICRSKSEGADAVEIRLDLIHGFE----LDQLSSLIPSDII 59
Query: 69 IV--YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
V YR K E E +L ALH A +LG+D+V+ + ++A K +S +
Sbjct: 60 SVVSYRSK------EVSEDLKLAALHKAVELGSDFVEVDYELAEKFFSKPLGGAKS--KI 111
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
IV+ TP ++L L ++++ T ADI+K++ + NDI++ A+IF+ L + P I++
Sbjct: 112 IVASFNYESTPPVDELIALAAKLKETKADIVKIITAANDISDTAKIFKFLDTTKTPTISF 171
Query: 187 SVGERGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
++ RG +S+LL+PKFN L Y L K LPTV Y+++ + +KVFG++
Sbjct: 172 ALAARGEISRLLAPKFNSFLTYAYLDDKSGSAQELPTVYDAVHVYQIKRLTRQSKVFGVV 231
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF-AGFSVGFPYKEAV 303
P+ S+G +L+N N++GIY+P VDD++ FF T++ PD AG SV P+++
Sbjct: 232 GNPISQSRGYLLYNAGMIAKNFDGIYLPFLVDDVRLFFKTFNMPDLIAGTSVTAPHRQIA 291
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
M DEV P A+AI AV+ I+RRP DG +IGYN D A+I A+E + E + G A
Sbjct: 292 MDCIDEVDPAAKAIGAVSAILRRP-DGTMIGYNMDWGAAIYAVEQGLLE--HSGGKAEGK 348
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG---------A 414
PL G + VLAGAGGAGR LA+G K +G +++ D+D +RA+ +A+ G A
Sbjct: 349 GPLEGVLLVLAGAGGAGRGLAYGVKEKGGYLLVADLDLDRAQEVATTFGGDVTSVKELTA 408
Query: 415 ARPFEDILNF---QPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVYTPRKT 470
FE L +K +L +ATP+GM P+ DR ++ L+ Y +VFDAVY P +T
Sbjct: 409 PDAFEKTLKKFCGHLKKAPVLCHATPVGMKPHVDRTIFADVSALKGYSVVFDAVYNPAET 468
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVL 516
RL ++A++ G VSGVEMFLR+A QF LFTG AP + R+++L
Sbjct: 469 RLQREAKSIGVTTVSGVEMFLREADEQFELFTGGIPAPSQVHRDVLL 515
>gi|449531177|ref|XP_004172564.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like, partial [Cucumis
sativus]
Length = 328
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 211/312 (67%), Gaps = 2/312 (0%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
I++N+T+IC P+M++S+++++ ++ +A GAD+VEIRLD + F P +DL++++ + PL
Sbjct: 17 ISRNSTLICVPIMSESIDKMIVDVKKAGENGADIVEIRLDALKIFNPHEDLKLLIKESPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRP W GG Y+GDE++RL+ L LA LGADY+D EL+VA + + +
Sbjct: 77 PTLFTYRPNWEGGQYDGDENQRLDVLRLAMKLGADYIDVELQVAREFIDSIQQEKPNNFK 136
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
IVS + +TPS EDLG LV+ +QATGADI+K+ + DIT++AR+FQ+L + QVPII
Sbjct: 137 VIVSNHNYKKTPSLEDLGSLVAEIQATGADIVKIATTALDITDVARMFQVLVYSQVPIIG 196
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+ +RG + +LL PK+ G L +G+L+ V G PT++ L Y HI DTKVFG+
Sbjct: 197 LVMKDRGFICRLLCPKYGGYLTFGTLEEGIVSAPGQPTIKDLLNLYNFRHIGPDTKVFGI 256
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PVG SK P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV
Sbjct: 257 IGNPVGDSKLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAV 316
Query: 304 MKFCDEVHPLAQ 315
K+CDEV +A+
Sbjct: 317 FKYCDEVDSVAK 328
>gi|115436644|ref|NP_001043080.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|113532611|dbj|BAF04994.1| Os01g0375500 [Oryza sativa Japonica Group]
gi|222618473|gb|EEE54605.1| hypothetical protein OsJ_01836 [Oryza sativa Japonica Group]
Length = 321
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/317 (52%), Positives = 221/317 (69%), Gaps = 6/317 (1%)
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+GE+GL+S++LSPKF G L +GSL T V G PTVE L Y + I DTKV G+I+
Sbjct: 1 MGEKGLMSRVLSPKFGGYLTFGSLDATKVSAPGQPTVEELIDIYDIRRIGPDTKVLGVIA 60
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
PV SK P+LHN + V YN +Y+P+ D++ +F STYSSPDF+GFS P+K ++
Sbjct: 61 NPVKQSKSPVLHNTCLQSVGYNAVYLPLLADNIARFLSTYSSPDFSGFSCSLPFKVDAVQ 120
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
C E P+A++I A++TIIRRP DGKL+GYN D +I AIED I G KN + P
Sbjct: 121 CCHEHDPVAKSIGAISTIIRRP-DGKLLGYNNDYIGAICAIEDGIGGPGSKNAAVT---P 176
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
LAGR+ V+ GAGGAG+A+A+GAK +GAR+V+ + +E+A SLA+ V G A ++ F+
Sbjct: 177 LAGRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGGHALRLAELETFR 236
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
PE+G ILANAT LGM+PN D P+ ++ L Y +VFDAVY P+ TRLL++AE G +VS
Sbjct: 237 PEEGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLLREAEECGVKVVS 296
Query: 486 GVEMFLRQAIGQFNLFT 502
GVEMFLRQA+GQF FT
Sbjct: 297 GVEMFLRQALGQFERFT 313
>gi|384250424|gb|EIE23903.1| shikimate 5-dehydrogenase, partial [Coccomyxa subellipsoidea C-169]
Length = 514
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 290/517 (56%), Gaps = 26/517 (5%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINN---FQPGKDLEIIL---TKKPLPVLIV 70
+ A +V ++ + + GADVVE+R+D + + F P L +L LP ++
Sbjct: 2 VTADTVNGAIAEIREVADFGADVVELRMDFLKDIDLFNPAAFLNPLLDACNAVRLPAIVT 61
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG------- 123
+RP W GG Y+G E RL L A LGA YVD E A+ + +G
Sbjct: 62 FRPNWEGGQYDGPEPLRLAVLKYAAVLGAPYVDVEYLAANFFFASECMHAGTGEGEVPLT 121
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQL--LSHCQV 181
T+ I+S + ETPS+E L LV M GADI K+ + I + AR+ L S +
Sbjct: 122 TKVILSHHDYDETPSDEILEALVKEMFKGGADIAKIATTAQRIEDSARMLALPGKSSGER 181
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLK--GTPVLGLPTVESLRQTYKVEHINADTK 239
P+IA ++GE+GL S++L+PKF G L +G+L G PTV LRQ Y++++ ++ TK
Sbjct: 182 PVIALAMGEKGLTSRVLAPKFGGYLTFGALSPAKASAPGQPTVTELRQLYRLQNQSSATK 241
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
VFG++ PV HS+ P LHN + +YVP+ VD+L+ F Y P F+G S+ P+
Sbjct: 242 VFGIVGNPVSHSRSPALHNAALAAAGLDAVYVPLLVDELRPFLDAY--PSFSGISITIPH 299
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K A ++ D+ P+A I A NT++R+P G L YNTD A+I+A+E A+ G K G
Sbjct: 300 KLAALECADDADPVAARIGAANTLVRQPG-GGLKAYNTDWSAAISAVEAALG--GSKAGG 356
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
S L G V+ GAGGAG+ALAFGA RGA V++ + L A +
Sbjct: 357 ES---ALKGLRVVVVGAGGAGKALAFGAIERGAEVLVCNRQGHPCTFLIIQWTDMAVEYA 413
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
D+ + G +L N+T +GMHP + PVS L Y++VFDAVYTP +T LLKDA+
Sbjct: 414 DVAAGK-VAGDVLMNSTSIGMHPKENETPVSAGALGGYKVVFDAVYTPLETLLLKDAKDQ 472
Query: 480 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G I VSG+EMF+ QA QF LFTGK AP + MR+ L
Sbjct: 473 GCITVSGLEMFVGQAAEQFELFTGKPAPLDLMRQATL 509
>gi|449017210|dbj|BAM80612.1| fusion protein of 3-dehydroquinate dehydratase and shikimate
5-dehydrogenase [Cyanidioschyzon merolae strain 10D]
Length = 542
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/534 (36%), Positives = 292/534 (54%), Gaps = 34/534 (6%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
+IC + A S E+ +++MY+A+ GAD+VE R D + G+ E ++ ++PLP++ Y
Sbjct: 11 LICTSITANSAEEAIADMYEARRAGADLVEFRADYLAE---GESWERVVDQRPLPMVFTY 67
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFEL------KVASNILGKQYSSHQSGTR 125
RP GGL + ++H+R+ L A G +YVD EL ++ ++ Q + R
Sbjct: 68 RPVCEGGLSDMNDHERVRLLQRAVQHGVEYVDVELANMDLFRMPESV---QLQDASTRPR 124
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPI 183
IVS + +E +L + + + ATGADI K+ +D+ + AR+F LL P
Sbjct: 125 LIVSYHSFTRPLTEAELAEIYTAIVATGADICKIAMMCHDLCDNARLFALLKRTAGSKPT 184
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKV 240
IA +GE G +S++L+ KF A++ + P +E L Y+ +N DT V
Sbjct: 185 IAIGMGEYGQISRVLAAKFGPAMLTFTTLSEARASAPGQFRIEELIDHYRFHSLNPDTTV 244
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGF 297
+G+I PV HS P +HN F N +Y+P V D L+KF T + G SV
Sbjct: 245 YGVIGAPVRHSMSPRIHNHAFGLCRLNHVYLPFLVQDGSKLQKFLDTMTQFGLRGASVTI 304
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+ +M+ DE+ +A+ I AVNTI+ P G+ GYNTD +A++ A+ + + G +
Sbjct: 305 PHKQRIMECLDELDDVAKQIGAVNTIVVDPLTGRRKGYNTDWQAAVDAVSETLMP-GIEQ 363
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMG--- 413
G A + L R VL GAGGA RA+AFG G ++ I + ERA+SLA+D+
Sbjct: 364 GQARL-TALQRRHVVLLGAGGAARAIAFGVVHCGCGKLTIVNRTLERARSLANDLSPFGK 422
Query: 414 ---AARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
A ED Q E+ IL N+T +GMHP+ + VPV EE L + LVFDAVY
Sbjct: 423 TELVALSLEDFCQQQRNPATRERIDILMNSTSIGMHPDVNVVPVPEEILEPHCLVFDAVY 482
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL A+ G + V GVEMF+RQA QF ++TG AP + MR IVL +
Sbjct: 483 NPIETRLLSLAKRRGCLTVDGVEMFVRQAAAQFTIWTGLRAPAQEMRNIVLQEL 536
>gi|452825796|gb|EME32791.1| bifunctional 3-hydroquinate dehydratase/shikimate 5-dehydrogenase
[Galdieria sulphuraria]
Length = 521
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 293/522 (56%), Gaps = 22/522 (4%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
++C P+ AQ V++ + +A+ GAD+VE+RLD +++ + +DL + +P +
Sbjct: 4 CLLCVPITAQYVKEAFEQIKEAQRLGADLVELRLDLLDSTEEWEDL---VKHCFVPKIAT 60
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
RP W GG Y G E +RL L A LG +YVD EL+ + K + H T+ I+S
Sbjct: 61 CRPHWEGGNYNGSESRRLSILSEACKLGCEYVDVELEAITR-FEKPSNCH---TKLILSR 116
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+L S ++L S M + AD+IK+ +++I + +F ++ +VP IA +GE
Sbjct: 117 HLWNRPFSHQELANTYSSMLSNQADVIKVACKIDNIEQCEILFHFIAASKVPCIALGMGE 176
Query: 191 RGLVSQLLSPKFNGALVYGSL-KGTPVL-GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G +S++L+ ++ L + SL KG G + Q Y+++ +++ TK++G++ PV
Sbjct: 177 AGQISRILAGRYGAFLTFASLSKGKESAPGQIELNDCIQMYRLKSLSSSTKLYGVVGNPV 236
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
HS P +HN F ++ + +Y P+ V+D + + F G SV P+KE ++ D
Sbjct: 237 AHSMSPAIHNLAFASLSLDCVYCPLAVEDFGSCWKMLNEMGFMGLSVTIPHKETAKRYVD 296
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-IKERG---YKNGTASFGS 364
E+ LA I A+NT+++ K GYNTDC A+++AIED I +R + T SF +
Sbjct: 297 ELDGLALKIGAINTMVKLERGWK--GYNTDCLAAVSAIEDGLIAQRSSSELSHRTNSFST 354
Query: 365 PLAGRMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
+ VL GAGGA RA+AFG R + + + +++R K LA+++ A P+E +
Sbjct: 355 QAGAKPLVLILGAGGAARAIAFGLLERSYNIYVVNRNYDRCKKLAAELGIEAIPWEGLRR 414
Query: 424 FQPEKG---AILANATPLGMHPNTDRVPVSEETLRDYQ---LVFDAVYTPRKTRLLKDAE 477
F E ++ +T +GMHPN P+S + L+ LVFD VY P +TR L++A
Sbjct: 415 FLLEHKDSIDVIIQSTSIGMHPNVHDTPLSFDDLQSLSKKPLVFDVVYNPVETRFLREAR 474
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
G +VSG+EMF+RQA+ QF L+TG +AP E MR++VL +
Sbjct: 475 EVGCYVVSGLEMFVRQAVYQFELWTGSKAPVEQMRQVVLKRL 516
>gi|451981182|ref|ZP_21929555.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
gi|451761592|emb|CCQ90808.1| Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
[Nitrospina gracilis 3/211]
Length = 495
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 283/517 (54%), Gaps = 39/517 (7%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL-EIILTKKPLPVLIV 70
MIC P++ ++++ L ++ A + AD +E RLD I PG DL +I P ++
Sbjct: 1 MICVPIVGPTMDRALEDI-DACRKVADFIEFRLDLI----PGHDLPRLIEAAGDTPYIVT 55
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R K GG + G E +R+ + A +LGA Y+D E +L + ++ ++ I+S
Sbjct: 56 NRAKMDGGQFPGTEEERVAVIKQAIELGAMYIDIETSTPPELL-RSVLENKGKSKAILSH 114
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYS 187
+ T + D Y + M AD++K++ D+++ R+ QLLS +V +IA+
Sbjct: 115 HDFTRTDDKVDALYEL--MTQMPADVLKIITYAQDLSDNLRLLQLLSRARRDEVKLIAFC 172
Query: 188 VGERGLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGL 243
+GE+G VS++LSP + G L +GSL + P G +L+ Y+V +N D+K+FG+
Sbjct: 173 MGEKGEVSRILSPMYGGWLTFGSLDRGKESAP--GQIPATTLKHIYRVNELNLDSKIFGV 230
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PV S G ++HN F +N +YVP +V L +FF+TY + F G SV P+KE +
Sbjct: 231 IGDPVNKSMGYLIHNRAFSELNLPNVYVPFWVKSLTRFFNTYQA-YFTGLSVTMPFKEDI 289
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
MK + + PLAQ I AVNT++R +D +GYNTD +++A+ A+ E
Sbjct: 290 MKHMNRIDPLAQKIGAVNTVVREGND--WVGYNTDVTGALSALT-AVTE----------- 335
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI-FDIDFERAKSLASDVMGAARPFEDIL 422
L G ++ GAGG +A+ G +GA + + ++ + E+A++LA ++ DI
Sbjct: 336 --LKGTRVLIIGAGGTAKAIGHGVTEQGAALTLTYNRNKEKAEALAQELNAKLISIRDID 393
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
+ + I+ N +P GM PNT P L+ +VFD+VY P +TRL+KDA G
Sbjct: 394 AHETD---IVINCSPAGMTPNTKDTPYPARLLKPGMVVFDSVYNPMETRLIKDAREKGCT 450
Query: 483 IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++ G+E+F+ QAI Q L+TG P++ + E+V +
Sbjct: 451 VIPGIELFVNQAIEQLKLWTGTTPPRDPLHEVVETRL 487
>gi|356533611|ref|XP_003535355.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional 3-dehydroquinate
dehydratase/shikimate dehydrogenase, chloroplastic-like
[Glycine max]
Length = 455
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 264/436 (60%), Gaps = 14/436 (3%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ +N+T ICA A+ VE+ + M +AK GAD+VE RLD + +F P + + ++ +PL
Sbjct: 17 VRRNSTPICASTTAEWVEEKVFEMVKAKELGADLVEARLDFLKDFHPAQHHQSLINNRPL 76
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKV--ASNILGKQYSSHQSG 123
P+LI YRP GG +GDE +R +AL A +LG+++VD + + +I GK+ S
Sbjct: 77 PILITYRPIXEGGESDGDESQRQDALRQAIELGSEFVDDDRAKGGSXSIGGKKPES---- 132
Query: 124 TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL-----SH 178
+ IVS + TPS E++G L +R+QA+GAD++K+ + D T I +F +
Sbjct: 133 VKIIVSSHNLERTPSVEEIGNLAARIQASGADVVKIATTAFDNTXILNLFMKIFKKXXKK 192
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINA 236
QVP+I ++ G+ +L KF G L +GS++ + G T++ L Y I
Sbjct: 193 KQVPMIGIAMRXEGIFVTVLCAKFGGFLTFGSVEAGAISAPGQXTIKELLDLYNFRQIGV 252
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
TKV G + P+ SK P L+N TF+ V ++G+Y+P+ VD++ F +TYSSPDF G++
Sbjct: 253 GTKVHGAVGNPISDSKSPHLYNATFKSVGFDGVYLPLLVDNVSDFLNTYSSPDFVGYNYT 312
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P KE ++ CDE+ P+A+AI A++ +I+RP+DGKL+G N D +I AIE+ + +
Sbjct: 313 IPPKENGLRCCDEIDPIAKAIGAISCMIKRPNDGKLLGNNFDYLGAIAAIEERLHLQDSN 372
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ S SPL G++FV+ GAGGAG+A+A+G K +GARVV+ + + +AK L + V G A
Sbjct: 373 RRSISGCSPLCGKLFVVMGAGGAGKAIAYGGKEKGARVVVANRIYAKAKELVTKVGGEAI 432
Query: 417 PFEDILNFQPEKGAIL 432
++ +F KG +L
Sbjct: 433 TISELESFH-TKGLVL 447
>gi|32474293|ref|NP_867287.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|417304128|ref|ZP_12091163.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
gi|32444831|emb|CAD74833.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Rhodopirellula baltica SH 1]
gi|327539589|gb|EGF26198.1| shikimate 5-dehydrogenase [Rhodopirellula baltica WH47]
Length = 496
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 261/509 (51%), Gaps = 28/509 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEE---RHE 397
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+MF+RQA QF LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKI 486
>gi|440716706|ref|ZP_20897210.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
gi|436438203|gb|ELP31763.1| protein containing Quinate/shikimate 5-dehydrogenase domain protein
[Rhodopirellula baltica SWK14]
Length = 496
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 261/509 (51%), Gaps = 28/509 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEILAADIGCRVIDWEE---RHE 397
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+MF+RQA QF LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKI 486
>gi|421613663|ref|ZP_16054736.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
gi|408495622|gb|EKK00208.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula baltica SH28]
Length = 496
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 260/509 (51%), Gaps = 28/509 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + +P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNANIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEE---RHE 397
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+MF+RQA QF LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQFKLFTGQEASIELMRKKI 486
>gi|449134129|ref|ZP_21769633.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
gi|448887232|gb|EMB17617.1| protein containing Quinate/shikimate 5-dehydrogenase
[Rhodopirellula europaea 6C]
Length = 496
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 261/509 (51%), Gaps = 28/509 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L +++++ +GA +VE+RLD I+ DL+ +L +P PV+
Sbjct: 1 MICVSLGRARHKRMIAEHQFLVEQGAQLVELRLDYISR---AVDLKRLLNDRPGPVVATV 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R K GG +E E RL L GA+YVD E VA+ I T+ I+S +
Sbjct: 58 RRKEDGGRWERSEQDRLMLLRSVIAAGAEYVDIEADVAAQI------PRYGNTKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
TP E+L L M A ADI+K+ N ++ R+ L + ++P I +GE
Sbjct: 112 DFSGTP--ENLDELHEAMAAEDADIVKIACMANSFSDNIRMINLCKNAKIPTIGICMGEI 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G+++++L+ + Y + L G + + Y E I DT +FG+I+ PV
Sbjct: 170 GMLTRILANRVGSPFTYATFSSDKKLAPGQLNWKEMNSVYHYETIKEDTALFGVIADPVA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F N Y+P+ V DDL F T G S+ P+KE+ +++C
Sbjct: 230 HSHSPLIHNAAFVDAGLNARYLPLRVPKDDLPSFMRTCKELGIQGISITIPHKESALQYC 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPL 366
+ I A+NT+I D +GYNTD A++ IE++ K ERG +N L
Sbjct: 290 TQAESSCTGIGAINTMIFNGDD--RLGYNTDYRAAMDCIEESFKIERGTENS-------L 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ ++ GAGG RA+A+G + R V I ERA+ LA+D+ +E+
Sbjct: 341 QGKTALVLGAGGVSRAIAWGLRQRKCDVTISSRTRERAEMLAADIGCRVIDWEE---RHE 397
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
K +L N TP+GMHP+ D P ++ L + +VFD VY P T L+K A + +++G
Sbjct: 398 AKVQLLINGTPIGMHPDVDNTPFNQSALNQFMVVFDTVYNPENTLLIKQATQKQSRVITG 457
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+MF+RQA Q+ LFTG+EA E MR+ +
Sbjct: 458 VDMFVRQAAYQYKLFTGQEASIELMRKKI 486
>gi|283781777|ref|YP_003372532.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
gi|283440230|gb|ADB18672.1| shikimate 5-dehydrogenase [Pirellula staleyi DSM 6068]
Length = 495
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 257/486 (52%), Gaps = 31/486 (6%)
Query: 36 GADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAE 95
GA +VE+RLD I + +L +L ++P PV+I R + GG + E +R L A
Sbjct: 26 GAQLVELRLDYIMS---DVNLRRLLPERPTPVVITVRRQRDGGRWSRSEDQRQVLLRQAI 82
Query: 96 DLGADYVDFELKVASNI--LGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG 153
G +YVD E +A +I GK T+ IVS + ETP E+L L RM
Sbjct: 83 ASGVEYVDLEEDIAGSIPRFGK--------TKRIVSYHNFQETP--ENLAALHERMSKLD 132
Query: 154 ADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKG 213
ADI+K+ + ++ R+ QL+ ++P +A ++GE G S++L KF L Y +
Sbjct: 133 ADIVKIATMAHTPSDTTRLVQLMKGAKIPTVAIAMGEIGTPSRILGGKFGSPLTYAAFSS 192
Query: 214 TPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV 271
L G + E +R Y + INADT+VFG+++ PVGHS P+LHN FR ++ N +Y+
Sbjct: 193 DRELAPGQLSYEQMRAVYHYDDINADTEVFGVVADPVGHSMSPLLHNAAFRALSMNRVYL 252
Query: 272 PMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD 329
P+ V + L KF G SV P+KE V++ + IAA NT+I + +
Sbjct: 253 PLRVPREHLAKFLQDCPELGIKGLSVTIPHKEEVIQHLVKTDDATTEIAACNTVIWK--E 310
Query: 330 GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389
GK +GYNTD AS+ +I+ G S LAG+ +L GAGG +A+A G +
Sbjct: 311 GKPVGYNTDYRASMASIDRLF-------GGDEKQSGLAGKTALLLGAGGVSKAIACGLRR 363
Query: 390 RGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPV 449
RG VVI E++++LA AR + L + ++ N TPLGMHPN D P+
Sbjct: 364 RGCDVVIASRTLEKSEALAKKF--KARTIDWKLRHSVQ-AHLVVNGTPLGMHPNLDESPI 420
Query: 450 SEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
E + FD VY P +T +K A AGA ++G++MF+ QA QF LFT + P +
Sbjct: 421 DEGYFSTDMVAFDTVYNPEQTLFIKRAREAGAKTITGIDMFVGQAALQFKLFTAHDPPMD 480
Query: 510 FMREIV 515
MR+ +
Sbjct: 481 LMRQTI 486
>gi|320102191|ref|YP_004177782.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
gi|319749473|gb|ADV61233.1| shikimate 5-dehydrogenase [Isosphaera pallida ATCC 43644]
Length = 527
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/514 (34%), Positives = 253/514 (49%), Gaps = 29/514 (5%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
IC L ++ A GA +VE+RLDC+ DL+ IL + P ++ R
Sbjct: 4 ICVILGRGRHAALIQEWKDAADAGAQLVELRLDCLRR---DIDLKRILANRYSPCVVTIR 60
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNI--LGKQYSSHQSGTRFIVSC 130
GG++ DE +R L A +G DYVD E +A I GK + I+S
Sbjct: 61 RGRDGGIWRQDEERRQRLLREAIVMGVDYVDIEADIAKEIRRFGK--------VKRIISY 112
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ ETP E L ++ +M ADI+K+ I + A + + S VP IA ++GE
Sbjct: 113 HNFKETPKE--LPDIIQKMATLDADIVKVATIATSIQDAAFVLKTASEAPVPTIAIAMGE 170
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G +++L K+ L Y S GLP L++ Y+ E I++ T+V+G+I PV
Sbjct: 171 VGFFTRILGAKYGAPLTYASFNPDRSFAPGLPNFRDLKRDYRFEKIDSATEVYGVIGDPV 230
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
S P++HN F H N +YVP V + L FF + G SV P+KEA+ +
Sbjct: 231 AQSLSPMVHNAIFEHYGQNKVYVPFKVAEGKLPTFFESLDFLKLKGLSVTIPHKEAIRQH 290
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
DE + + + NT+ RP DG +G+NTD A I +EDA+ G N S PL
Sbjct: 291 LDEEDDIVETTGSCNTVEIRP-DGTRVGHNTDYPAVIETLEDALG--GRPNPALS---PL 344
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ +L GAGG R++A+ GA V I + E++K+LA +V P+ +
Sbjct: 345 EGKQALLVGAGGVARSIAYALTRHGAGVTIVARNDEKSKALAEEVGCKFVPWTMRASTLS 404
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
+ IL NATP+GMHP + P+ R+ LVFD VY P T LK I +G
Sbjct: 405 D---ILINATPVGMHPEVNETPLPPAAFRENILVFDTVYHPENTLFLKLGREHNCKIATG 461
Query: 487 VEMFLRQAIGQFNLFTGKEAPK-EFMREIVLAKF 519
VEMF+RQA Q F G E P + +R +V KF
Sbjct: 462 VEMFVRQAARQARFFAGVENPPLDVIRGLVRRKF 495
>gi|430743501|ref|YP_007202630.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
gi|430015221|gb|AGA26935.1| shikimate 5-dehydrogenase [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 262/513 (51%), Gaps = 26/513 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC L + +A A G ++VE+RLDC+ +P DL+ IL +P P++
Sbjct: 1 MICVTLGRGRHASLAEEWKEAAAAGVELVELRLDCLRR-EP--DLKRILANRPTPLVFTI 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R GG++ G E +R + L A LG DYVD E+ +A I +++ T+ IVS +
Sbjct: 58 RRGVDGGIWRGSEDRRQQLLREAIALGVDYVDLEMDIAPKI--RRFGK----TKRIVSYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
+TP+E L + + AD++K+ + + R+ L + VP + ++GE
Sbjct: 112 NLKKTPAE--LIEIAEQCDEMDADVVKIATKAESLADALRVLSLGTRAVVPTVTIAMGEL 169
Query: 192 GLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G +++L K+ Y + + T G+PT + L+ Y + INA+T+V+ +I P+
Sbjct: 170 GFFTRVLGAKYKAPFTYAGINPERTFAPGMPTFQVLKNDYAYDMINAETEVYAVIGDPIE 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
S P +HN FRH+ N + VP+ + L+ + GFSV P+KE ++K
Sbjct: 230 QSLSPAIHNAAFRHLGLNKVLVPLLIPAGTLEASLKELEVLNIQGFSVTIPHKEELVKLL 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
D+ + + NT++ + GK IG+NTD A++ +E + G K G A SPL
Sbjct: 290 DQKDGAVERTGSCNTLVFQ--KGKKIGHNTDYRAAMDTLEAGMG--GLKEGGA---SPLM 342
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ ++ GAGGA R+++FG RGA V I + RA LA +V + + E
Sbjct: 343 DKQVLILGAGGAARSISFGCSRRGASVTITNRHDARATKLAEEVGCRTVSWAQRASTLAE 402
Query: 428 KGAILANATPLGMHPNTDRVPVSEETLRDYQLV-FDAVYTPRKTRLLKDAEAAGAIIVSG 486
I+ N TP+GMHPN D PV T ++ FD +Y P T LK A I ++G
Sbjct: 403 ---IVVNCTPVGMHPNVDDTPVPPATFSTPGMIAFDTIYHPENTMFLKLARERECIPING 459
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
V+MF+ QA QF L+TG +APK+ MR + K
Sbjct: 460 VDMFVGQAAEQFKLYTGMDAPKDIMRAALKRKL 492
>gi|406829999|ref|ZP_11089593.1| 3-dehydroquinate dehydratase [Schlesneria paludicola DSM 18645]
Length = 492
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 262/509 (51%), Gaps = 31/509 (6%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + +++ + GA +VE+R+D + D+ +L +P PV++
Sbjct: 1 MICVSIARTRHRMMIAEHHALAERGAQLVELRIDWLAR---DPDVPRLLKDRPTPVIVTC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R GG + G E R+ L A GADYVD E +AS+I +Y T+ IVS +
Sbjct: 58 RRAQDGGKWRGTEEARIRLLRTAIVSGADYVDLEDDIASSI--PRYGK----TKRIVSHH 111
Query: 132 LDCETPSE-EDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
TP E++ ++ M DIIK+V N ++ R+ +L+ ++P +A+ +G+
Sbjct: 112 DFNGTPDHIEEVWAEIAEMNP---DIIKVVTLANSPSDCVRMLKLVKDAKIPTVAFCMGD 168
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPV 248
G+ S++ K Y + + G + + ++ Y E INA T++FG+I P+
Sbjct: 169 FGVWSRVACGKLGSPFTYATFSQDREVAPGQLSFQDMKHIYHYETINAKTQLFGVIGDPI 228
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
GHS P+LHN R + +NG+YVP+ V D L + + + DF G SV P+KEAV+
Sbjct: 229 GHSLSPLLHNEAMRKIGFNGVYVPLRVARDQLTQTLADLETLDFRGLSVTIPHKEAVLAK 288
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
+ I A NT+ R SD + +NTD +A++ +++ A+ G L
Sbjct: 289 FPRCEEFVRQIGAANTLFR-GSDNQWQSFNTDYQAALDSVKLALPT----------GDTL 337
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ +L GAGGA RA+ G G +VI RAK+LA + +E N
Sbjct: 338 EGKRVLLLGAGGAARAIGMGITRAGGALVITSRTSARAKTLAEQLNCRHVTWE---NRGA 394
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
E IL N TP+GM+P D+ P + LR+ +VFD +YTP T L+K+A+ G VSG
Sbjct: 395 EYADILINCTPVGMYPEMDQTPFQQNWLREGMIVFDTIYTPENTLLIKEAQVRGCKTVSG 454
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+EMF+RQA QF FTGK A + +RE +
Sbjct: 455 IEMFIRQAAAQFERFTGKPASLDDLRETL 483
>gi|87311736|ref|ZP_01093851.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
gi|87285520|gb|EAQ77439.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Blastopirellula marina DSM 3645]
Length = 495
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 262/509 (51%), Gaps = 29/509 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + + +++ G +VE+RLD IN L+ +L +P PVL+
Sbjct: 1 MICVSIGRGRHKHIIAEHRHLVDLGVKLVELRLDYINGT---IKLKRLLNDRPGPVLVTC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R + GG + G E +R L A GADYVD E +A+NI +Y + T+ I+S +
Sbjct: 58 RREQDGGRWAGMEAERQMVLRTAIVDGADYVDIEEDIAANI--PRYGT----TKRIISYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
ETP+ D+ + RM DI+KL N + R+ +L VP IA +G+
Sbjct: 112 NFRETPA--DIEEIHERMCKLDPDIVKLATMANSPHDNIRMLKLAQRNNVPTIALCMGDM 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G +++L K+ + Y + L G + +R+ Y + INA+T+++G+I+ P+G
Sbjct: 170 GTPTRILGAKYGVPITYSTYSNERTLAPGQIGYQQMREVYGYDQINAETEIYGVIADPIG 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFST-YSSPDFAGFSVGFPYKEAVMKF 306
HS P LHN FR N Y+P V + L F + + G SV P+KE +++
Sbjct: 230 HSLSPQLHNACFRDQGSNRCYLPFRVPREHLASFIQEDCPALEIKGLSVTIPHKETIVRM 289
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
+ + Q I A NT++ +G G+N+DC+A++ ++ A+ + +P
Sbjct: 290 IKKPNAAVQGIGAANTVLF--DEGGPSGFNSDCDAALASLSTALPQ--------DVANPY 339
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
+ ++ G+GG +A+A+G K+RG V+I E A LA + +ED
Sbjct: 340 ENKTALVLGSGGVAKAIAWGLKNRGVDVIIASRTDENADDLAKGLGCRMVSWED---RGL 396
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
E+ IL N TP+GMHPN + P+ + LR +VFD VY P +T L+K+A +V+G
Sbjct: 397 ERVDILINGTPVGMHPNVNESPIDKVRLRAGMVVFDTVYNPEQTLLIKEARQRECRVVTG 456
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+MF+RQA Q+ LFTG E ++ MR+ +
Sbjct: 457 VDMFVRQAALQYQLFTGSEPSRDLMRDTL 485
>gi|397911048|gb|AFO68800.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
Length = 246
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 178/258 (68%), Gaps = 12/258 (4%)
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
+L+N F+ V ++G+YV + VDD+ KF TYSSPDF GFS P+KEA + DE+ P+A
Sbjct: 1 LLYNQAFKSVGFDGVYVHLLVDDITKFLRTYSSPDFVGFSCTIPHKEAALGCLDEIDPVA 60
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLA 374
++I AVN IIR PSDGKL GYNTD +I+AIED ++ SPLAG++FV+
Sbjct: 61 KSIGAVNCIIRSPSDGKLSGYNTDYFGAISAIEDGLQ------------SPLAGKLFVVI 108
Query: 375 GAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILAN 434
GAGGAG+ALA+GAK +GAR+VI + +ERA+ LA V A ++ F PE G ILAN
Sbjct: 109 GAGGAGKALAYGAKEKGARIVIANRTYERARELAEIVGARALSLAELDTFHPEDGMILAN 168
Query: 435 ATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
+T +GM P D P+ ++ L +Y LVFDAVYTP+ TRLL++AE GA +VSG+EMF+RQA
Sbjct: 169 STSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEMFIRQA 228
Query: 495 IGQFNLFTGKEAPKEFMR 512
Q+ FTG APKE R
Sbjct: 229 YEQYERFTGLPAPKELFR 246
>gi|296122090|ref|YP_003629868.1| 3-dehydroquinate dehydratase [Planctomyces limnophilus DSM 3776]
gi|296014430|gb|ADG67669.1| 3-dehydroquinate dehydratase, type I [Planctomyces limnophilus DSM
3776]
Length = 517
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 267/512 (52%), Gaps = 37/512 (7%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAE-GADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+ IC + ++ Q++ +QA A+ GA++VE+R+D ++ D++ +L +P P ++
Sbjct: 3 SQICVGI-GRTRHQMMIAEHQALAQKGAELVELRVDYLSR---TPDMKRLLADRPTPTIV 58
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVS 129
R G + G E +R L A GADYVD E +A I ++Y T+ I+S
Sbjct: 59 TCRRVADRGRFRGTEEERQTILRTAILSGADYVDIEADIAPQI--RRYGK----TKRIIS 112
Query: 130 CNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVG 189
+ +TP +DL ++M AD++K+V N + R+ +L+ QVP + + +G
Sbjct: 113 HHDFDQTP--DDLEEKYAQMCKLDADLVKIVTMANRAEDCVRMLKLVEGAQVPTVGFCMG 170
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKP 247
E+G+++++L F Y + L G + + +R+ ++ E I T + G++ P
Sbjct: 171 EKGMLTRVLCGAFGSPFTYATFNKERELAPGQFSFDEMRKMFRYEQITRKTILLGVLGDP 230
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
V HS P+LHN R ++G+Y+P+ V +L + Y F G+S P+KE+V++
Sbjct: 231 VAHSLSPLLHNTLMRKAGFDGVYLPLRVSASELSETLDAYEQLGFTGYSATIPHKESVLQ 290
Query: 306 ---FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
CD+ +AI A NT+ R + G NTD +A++ AI +K
Sbjct: 291 KYPMCDD---FVRAIGAANTVYRDQA-GHWACSNTDYQAALDAILSGLKP---------- 336
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
G L G+ +L GAGGA +A+ + A V+ +R+++LA + G A +E
Sbjct: 337 GESLTGKRVLLLGAGGAAKAIGMAMQKSEAITVVASRTLKRSQALADQIGGRAITWE--- 393
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
N E IL N TP+GMHPN + P LR+ LVFD +YTP +T L+KDA G
Sbjct: 394 NRGSEFADILINCTPVGMHPNLNESPFPIHWLREGMLVFDTIYTPERTLLIKDARDRGCT 453
Query: 483 IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
V+GVEMF+RQA QF LFTG + + +R I
Sbjct: 454 TVTGVEMFIRQATAQFRLFTGLKLSLDDVRTI 485
>gi|149175942|ref|ZP_01854559.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
gi|148845096|gb|EDL59442.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Planctomyces maris DSM 8797]
Length = 498
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 157/509 (30%), Positives = 249/509 (48%), Gaps = 26/509 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + + V+ +GA++VE+RLD I D+ ++ +P PV+I
Sbjct: 1 MICVSIGRTRHKMVMMEHRSLAEKGAELVELRLDWIART---PDVNRLIKDRPTPVVITC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R G + E +R L A +YVD E +A I + R I N
Sbjct: 58 RRPEDKGRWNKTEEQRQALLRTAIVSEVEYVDIEDDIAGTI-----PRYGKTKRIISHHN 112
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
D ETP +DL + + M DI+KLV N + R+ QL+++ +VP I + +GE
Sbjct: 113 FD-ETP--DDLEEIHAAMCKKDPDIVKLVTMANSPGDSVRMLQLVANAKVPTIGFCMGEY 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
G++S++L K+ Y + L G + + Y+ + I +T V+G+I P+
Sbjct: 170 GVISRILCGKYGSPFTYATFSRERELAPGQLAFSEMSRIYRYDEIGPETPVYGVIGDPIA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P++HN F+H + +Y+P + D LK+ + + G+SV P+K ++
Sbjct: 230 HSLSPLIHNLAFKHDKLDAVYLPFRIPKDRLKETLKEFEWLNVQGYSVTIPHKAGALELA 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLI-GYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
DE ++ + NT+ + D K NTD +A++ +I + +G + P+
Sbjct: 290 DEADEASKKMGVANTLFK--DDKKAWQARNTDYDAALDSIRLGLDPQG-----KATADPI 342
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
G+ +L GAGG RA+ G + G + I + R + LA D+ +E N
Sbjct: 343 NGKQVLLLGAGGVSRAIGAGIVAAGGVLTISNRSRTRGEQLAKDLGCNHCTWE---NRGS 399
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
+ IL N T +GM+PN + P ++ +++ LVFD VY P T LLK A G VSG
Sbjct: 400 GRYDILVNGTAVGMYPNVNDTPFAQNFMQEEMLVFDTVYNPENTLLLKQARERGCKTVSG 459
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+EMF+RQA Q+ LFTGKEAP E MR +
Sbjct: 460 IEMFVRQAAAQYKLFTGKEAPLEVMRNTL 488
>gi|326526517|dbj|BAJ97275.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 167/266 (62%), Gaps = 2/266 (0%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
++ T++C PL+ ++VE++ + A A G D+VEIRLD I F+P +DL +L PLPV
Sbjct: 6 EDMTLLCVPLVGRTVEEMKIDAAAAAAAGGDLVEIRLDYIEGFRPREDLPRLLHSCPLPV 65
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L+ YRP W GG YEGD+ R E L LA +LG DYVD ELKVA + + + I
Sbjct: 66 LVTYRPNWEGGRYEGDDATRFETLSLAMELGVDYVDIELKVADKFVDFLSGTKPDKCKLI 125
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
VS + TPS E+L LV+R+Q GADI+K+ + DI +++R+FQ++ HCQVP+I
Sbjct: 126 VSSHNYESTPSCEELANLVARIQEVGADIVKVATTATDIVDVSRMFQVMVHCQVPMIGLV 185
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+ ERGL+S++LSPKF G L +G L T G PT+E L Y + I DTKV GLI+
Sbjct: 186 MSERGLMSRVLSPKFGGYLTFGILDATKTSAPGQPTLEELLDIYNIRCIGPDTKVLGLIA 245
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV 271
PV SK PILHN + V YN + V
Sbjct: 246 NPVKQSKSPILHNKCLQSVGYNAMQV 271
>gi|325110056|ref|YP_004271124.1| 3-dehydroquinate dehydratase [Planctomyces brasiliensis DSM 5305]
gi|324970324|gb|ADY61102.1| 3-dehydroquinate dehydratase; shikimate dehydrogenase [Planctomyces
brasiliensis DSM 5305]
Length = 496
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 248/508 (48%), Gaps = 25/508 (4%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
MIC + ++ + + GA +VE+RLD + + D+ ++L +P +I
Sbjct: 1 MICVSVGRTRLKMMRAEHEALSRAGAQLVELRLDWLKHVN---DISLLLKDRPTATVITC 57
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
R G + G E +R + L A G ++VD E+ +A +I +Y TR IVS +
Sbjct: 58 RRAEDQGKWRGSEDERQKLLRAAIVDGVEFVDIEVDIAKSI--PRYGK----TRRIVSYH 111
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGER 191
ETP ++L + ++ A+ D+ K+V N + R+ +L++ ++P + + +GE
Sbjct: 112 NFEETP--DNLEEIHKQIAASDPDVAKIVTMANSPADGVRMLELVAKSKIPTVGFCMGEF 169
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVG 249
GL +++L K+ Y S L G + + + Y+ + I+ DT+VFG++ P+
Sbjct: 170 GLFTRVLCTKYGAPFTYASFSSERELAPGQISFREMLELYRHDQIDVDTRVFGVLGDPIA 229
Query: 250 HSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P LHN F N +Y+P + + + + GFS+ P+KE ++
Sbjct: 230 HSYSPRLHNDAFEAEKINAVYLPFRISEQHFEDSMRALRRLNTEGFSITIPHKERIVTQA 289
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
D A+ I A NT+ R G NTD EA++TA+ A K+ G+ G
Sbjct: 290 DHTDDDAKEIGAANTLYRN-QKGIWFATNTDFEAAMTALRQATKKAGWPEGG------FK 342
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
R ++ GAGG RA+ G G ++V+ RAK LA + +E+ +PE
Sbjct: 343 DRKVLILGAGGVARAIGHGVVRGGGQLVVTGRTRSRAKELAEKLGCQHCSWENRGAQRPE 402
Query: 428 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 487
+L N TP+GM PN D P + + D +VFD +Y P T L+K A I SG+
Sbjct: 403 ---VLINCTPIGMFPNMDETPYEQHWMTDGMVVFDTIYNPENTLLVKQARERDCHIASGL 459
Query: 488 EMFLRQAIGQFNLFTGKEAPKEFMREIV 515
EMF+RQA QF FTG+ P + MR +
Sbjct: 460 EMFIRQAAAQFECFTGQNPPLDTMRNTL 487
>gi|384247564|gb|EIE21050.1| aldolase [Coccomyxa subellipsoidea C-169]
Length = 528
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 274/530 (51%), Gaps = 38/530 (7%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINN---FQPGKDLEIIL---TKKPLPVLIV 70
+ A +V+ L+ + +A GAD+VE+RLD + + P LE +L LP L+
Sbjct: 4 VTADTVDGALAEIGEAAHLGADLVELRLDFLTDIDLLDPTPMLERMLGACETALLPALVT 63
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
+RP W GG Y G + RL L A GA Y+D E A + + S T I+S
Sbjct: 64 FRPMWEGGQYSGPDLPRLAVLKAAAGAGAQYIDVEHLAAGSFFSSE-GEVPSSTAVIISH 122
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP----IIAY 186
+ ETPS+E L LV M GADI K+ + + + AR+ L + P +IA
Sbjct: 123 HNYSETPSDEALEALVEDMFDEGADIAKIATTAKCVEDSARMLALPG--KAPGGWLVIAL 180
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
++GE GL ++LL+PKF G L++G+L + G T+ LR+ Y+V DTKVFG++
Sbjct: 181 AMGEAGLPTRLLAPKFGGYLIFGALSAEESSATGQSTIAELRRLYRVHSQTEDTKVFGIV 240
Query: 245 SKPVGHSKGP----ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
P +GP +LHN + IYVP+ DDL+ + P F+GF + P++
Sbjct: 241 DSPAAAVRGPPWSAVLHNAALAAAGMDTIYVPLCADDLRSCLDAF--PCFSGFCLTAPHQ 298
Query: 301 E-AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
A ++ DE A I A +T+ +R +DG+L YNT+ A+++A+E A+ G+
Sbjct: 299 VLAALECADEADRSAARIGAADTL-QRQTDGRLQAYNTEWAAAVSALEAALGGAWCNAGS 357
Query: 360 ASFG-SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD-------IDFERAKSLASDV 411
G S L G+ V+ GAGGAGRALAFG +GARV++ D + + A LA +
Sbjct: 358 PQKGESALRGKCVVVVGAGGAGRALAFGVVEKGARVIVCDRQVTSSALQQQMAGILAISL 417
Query: 412 MGAARPFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
A + D+ + G +L N+ P M + VS L Y++V DA T +
Sbjct: 418 GSGASAVKHADVAAGRV-AGDVLINSMPACMEESL----VSAAALSCYRVVLDATCTSLQ 472
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
TRLL++A+ G VSG+E+ + QA QF L TG AP MR+ L +
Sbjct: 473 TRLLREAQELGCATVSGLEISVTQAAQQFELLTGAPAPVALMRQATLERM 522
>gi|262181541|gb|ACY29661.1| 3-dehydroquinate dehydratase 01 [Vitis vinifera]
Length = 222
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 148/210 (70%), Gaps = 3/210 (1%)
Query: 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
++KN+T+IC P+M +++E+++ +M +AK GAD+VE+RLD + F P +DLE+++ K PL
Sbjct: 6 MSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPL 65
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P L YRPKW GG YEGDE+ R +AL LA +LGADYVD ELKVA + + +
Sbjct: 66 PTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFK 125
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ---VP 182
IVS + TPS EDLG LV +QATGADI+K+ + +IT++ARIFQ+ H Q VP
Sbjct: 126 VIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVP 185
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLK 212
+I +GERGL+S++L PKF+G L +GSL+
Sbjct: 186 VIGLVMGERGLISRILCPKFSGYLTFGSLE 215
>gi|383765626|ref|YP_005444607.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
gi|381385894|dbj|BAM02710.1| 3-dehydroquinate dehydratase/shikimate dehydrogenase [Phycisphaera
mikurensis NBRC 102666]
Length = 528
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 256/526 (48%), Gaps = 50/526 (9%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKD-LEIILTKKPLPVLI 69
T++C P+ + L+ +A GAD+VE R D F +D L ++ LP ++
Sbjct: 2 TLLCCPITVNDADDALAACGRAAEAGADLVEFRCD---RFTDDRDALARLVADASLPCIV 58
Query: 70 VYRPKWAGGLYEGDEHKRLEALHL--AEDLGADYVDFE-LKVASNILGKQYSSHQSGTR- 125
R GG + G E R+ L + Y+DFE ++A+ G++ + TR
Sbjct: 59 TLRHASEGGGFSGLESLRVGLLLFLSQQPRPPAYLDFEHARLAALSAGERADLEDAATRC 118
Query: 126 -FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
I+S + P++ D +++ G ++K ++ + + + F+L+ P
Sbjct: 119 GLILSTHDFAGRPADLDR-RVLAMADTPGVRVLKAAWAARSLRDNLQAFELIERRLAPTA 177
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSL---KGTPVLGLPTVESLRQTYKVEHINADTKVF 241
A +G+ GL S++L+ KF G + + + GT G PT+ LR Y+ + I T+V+
Sbjct: 178 ALCMGDAGLPSRVLARKFGGFVTFAAADRASGT-APGQPTIAELRDLYRWDAIGPATRVY 236
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY---SSPDFAGFS 294
G+I PVGHSK P LHN F ++G+Y+PM + + LK S + S F G S
Sbjct: 237 GVIGDPVGHSKSPALHNAGFDASGFDGVYLPMPIPAGYEHLKATLSAWLDHGSLRFRGAS 296
Query: 295 VGFPYKEAVMKFCDE----VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
V P+K +++F +E + PLA I A NT+I DG L NTDC+A++ + A+
Sbjct: 297 VTIPHKADLLRFAEERGATIDPLAARIGAANTLIVG-EDGALAVRNTDCDAALGVVRRAL 355
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 410
G + G + GAGG RA+ G G RV +F+ ERA+SLA
Sbjct: 356 GGVGLR-----------GAAVAVLGAGGVSRAVVAGFADAGCRVTVFNRSVERARSLA-- 402
Query: 411 VMGAARPFEDILNFQPEKGA--ILANATPLGMH------PNTDRVPVSEETLRDYQLVFD 462
AA E + GA + NAT +GM P+ +P + +VFD
Sbjct: 403 ---AAFGVEAAPLAEAAAGAADVWINATSIGMETAEDPAPDASPLPDPPGSWGPGTVVFD 459
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 508
VYTP +TRLL+DA AAG + G MFL QA QF +TG EAP+
Sbjct: 460 TVYTPPETRLLRDAAAAGCVTAGGTAMFLAQAAAQFEAWTGVEAPE 505
>gi|307109521|gb|EFN57759.1| hypothetical protein CHLNCDRAFT_143054 [Chlorella variabilis]
Length = 375
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 163/281 (58%), Gaps = 4/281 (1%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV 70
T +C L+A +VE +L+ +A+ GAD+VE+RLD + F P DL +L PLP ++
Sbjct: 21 THLCTSLVAPTVEGMLAEAQEAEQNGADIVELRLDYLQQFAPEADLSRLLQACPLPAIVT 80
Query: 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
YRP W GG Y+G E +RL AL LA GA YVD ELKVA + +G IVS
Sbjct: 81 YRPTWEGGKYDGPEPQRLAALRLAALSGAAYVDVELKVAPAFFAG--TQPWAGGAVIVSS 138
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGE 190
+ T SEE+L LV R GADI+K NDIT+ R+ +L C VP IA ++GE
Sbjct: 139 HDYERTASEEELMALVERCHGAGADIVKFATMANDITDAHRVLSVLRRCPVPCIALAMGE 198
Query: 191 RGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFGLISKPV 248
RG +S+LL+PK+ G L +G+L G PT++ L Y ++ DT V G++ PV
Sbjct: 199 RGQISRLLAPKYGGFLTFGALSPDRASAPGQPTLQQLSGMYGLKQQRRDTAVLGIVGNPV 258
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 289
HS+ P +HN R NG+YVP+ VDD+ F +T++ D
Sbjct: 259 SHSRSPAIHNAALRQAGLNGVYVPLLVDDMPSFLATFTGED 299
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 48/72 (66%)
Query: 445 DRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
D PV L Y+LVFDAVYTP TRLL+DA AG +V+G MF+ QA QF LFTG
Sbjct: 299 DETPVPATALGGYRLVFDAVYTPLHTRLLRDAATAGCAVVTGDTMFVGQAADQFRLFTGV 358
Query: 505 EAPKEFMREIVL 516
EAP E MR +VL
Sbjct: 359 EAPVELMRSVVL 370
>gi|424513634|emb|CCO66256.1| predicted protein [Bathycoccus prasinos]
Length = 562
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 264/517 (51%), Gaps = 40/517 (7%)
Query: 38 DVVEIRLDCINNF----------QPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87
D+VE+R+D + G+ +E +P ++ +RP W GG +GDE R
Sbjct: 42 DIVELRVDFLEKSIRSDERKMKEAIGQLVEACEKVAKIPCVVTFRPTWEGGQDDGDEETR 101
Query: 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT-----RFIVSCNLDCE-TPSEED 141
L L GA YVD EL +A K + G + ++ + + E TPS +
Sbjct: 102 LRCLWEGFRAGATYVDCEL-LAIERFAKAKPDERDGVIKGPGQMLICSSHEYELTPSLDV 160
Query: 142 L-GYLVSRMQATG-ADIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGERGLVSQ 196
L +++A DI K+ DI ++ R+ ++L + P + E GL+S+
Sbjct: 161 LLKEKYEKIRANDMCDIAKIACVCQDINDVGRLAKVLEKARGDGYPCAVLGMSEHGLISR 220
Query: 197 LLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINA-DTKVFGLISKPVGHSKG 253
LL+ K L +GS++ G PT+ L + Y+V +TK+ G++ P+ SK
Sbjct: 221 LLATKLGSYLTFGSIRAGFESAPGQPTLRDLSELYRVNTSQTRETKILGVMGNPIAQSKS 280
Query: 254 PILHNPTFRHVNYNG-IYVPMFVDDLKKFFSTYS-----SPDFAGFSVGFPYKEAVMKFC 307
P LHN + YVP+ V D +F S + D+ GFSV P+KE+ +KFC
Sbjct: 281 PQLHNKALISAKVDDKCYVPLLVKDFAEFVENESLFNNKNNDWVGFSVTIPHKESALKFC 340
Query: 308 DE-VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP- 365
E V P+A+ I AVNT++R+ DG GYNTD A+I AIE A+ ++ + S
Sbjct: 341 GENVDPVAKQIGAVNTLVRQ-KDGSFRGYNTDYVAAIGAIEKALDPTIPRDAAETTDSKA 399
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL--N 423
L G+ ++ GAGGA R LAFGAK + A VV+ + +RA +LA G + ED+ N
Sbjct: 400 LKGKTVLVLGAGGAARGLAFGAKFKEANVVVANRSKDRADALAEACGGTSISVEDVASGN 459
Query: 424 FQPEKGAILANATPLGM-HPNTDRVPVSEETLRDYQLV--FDAVYTPRKTRLLKDAEAAG 480
F K ++AN T LGM + P +E ++ V FDAVY P +TRLL++A+ G
Sbjct: 460 FGDLKIDVIANTTSLGMVGERVNETPCPKEAIKKSGAVVCFDAVYNPLETRLLREAKECG 519
Query: 481 AIIVSGVEMFLRQAIGQFNLFT-GKEAPKEFMREIVL 516
+ SG++MF+ QA QF LF G++A MRE VL
Sbjct: 520 LTVASGLDMFVGQAARQFELFNEGQKADYAGMRETVL 556
>gi|337292890|emb|CCB90890.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Waddlia chondrophila 2032/99]
Length = 456
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 249/514 (48%), Gaps = 74/514 (14%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C P+ A+++ + L + A A+++E+RLD +++ P E++ + PV+ YR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSPEGINELVQACEK-PVIATYR 60
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K L L A D GADYVD E + ++ R I S +L
Sbjct: 61 KKNPVPL-----------LKAALDAGADYVDVE----------EINTSLPLERCIYSIHL 99
Query: 133 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGER 191
ETP E+L M+A+GA IIK+V + + I LL + + +IA+ +GE+
Sbjct: 100 Q-ETPPLEEL---YQSMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEK 155
Query: 192 GLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
GL+S+ +P + +G++ K P G P LR+ +K + +T + G+I P
Sbjct: 156 GLLSRYFAPAYGSFCTFGAIAEGKKSAP--GQPLATHLRK-WKAQ---VNTTLCGVIGDP 209
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
+ HS P +H + N +++P +DL K G +V P+KE+V+
Sbjct: 210 ITHSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLKGLAVTIPHKESVIP 269
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
DEV AQAI AVNTII GKL GYNTD ++ ++ +
Sbjct: 270 MLDEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQKR--------------TD 313
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
L G+ + G GGA +A A+G + G+ V +F + E+ K Q
Sbjct: 314 LRGKRVAILGNGGAAKAFAYGLQKEGSVVTLFGRNLEKLKE------------------Q 355
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
+ IL TP+GM PNTD+ V + L LVFD VY P KT+LLKDAE AG +S
Sbjct: 356 LMESEILIQTTPVGMAPNTDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTIS 415
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
G+EMF+ QA Q+ FT +EA +E M++ L F
Sbjct: 416 GLEMFMIQAREQYKFFTSQEANEEAMKKAALNAF 449
>gi|297621526|ref|YP_003709663.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
gi|297376827|gb|ADI38657.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Waddlia chondrophila WSU 86-1044]
Length = 456
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 249/514 (48%), Gaps = 74/514 (14%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C P+ A+++ + L + A A+++E+RLD +++ P E++ + PV+ YR
Sbjct: 3 VCVPITARTLPEALKEISFA-CSIAEMIELRLDYLDHPSPEGINELVQACEK-PVIATYR 60
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K L L A D GADYVD E + ++ R I S +L
Sbjct: 61 KKNPVPL-----------LKAALDAGADYVDVE----------EINTSLPLERCIYSIHL 99
Query: 133 DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS-HCQVPIIAYSVGER 191
ETP E+L M+A+GA IIK+V + + I LL + + +IA+ +GE+
Sbjct: 100 Q-ETPPLEEL---YQSMKASGAAIIKIVPTARSFIDNIAILNLLKKYPEDRLIAFCMGEK 155
Query: 192 GLVSQLLSPKFNGALVYGSL----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
GL+S+ +P + +G++ K P G P LR+ +K + +T + G+I P
Sbjct: 156 GLLSRYFAPAYGSFCTFGAIAEGKKSAP--GQPLATHLRK-WKAQ---VNTTLCGVIGDP 209
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
+ HS P +H + N +++P +DL K G +V P+KE+V+
Sbjct: 210 ITHSLSPAIHQAAYEADGLNFLFLPFHTTKEDLPKILDLMRQFPLRGLAVTVPHKESVIP 269
Query: 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
DEV AQAI AVNTII GKL GYNTD ++ ++ +
Sbjct: 270 MLDEVDVEAQAIGAVNTIINH--GGKLTGYNTDVFGAVQPLQKR--------------TD 313
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQ 425
L G+ + G GGA +A A+G + G+ V +F + E+ K Q
Sbjct: 314 LRGKRVAILGNGGAAKAFAYGLQKEGSVVTLFGRNLEKLKE------------------Q 355
Query: 426 PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
+ IL TP+GM PNTD+ V + L LVFD VY P KT+LLKDAE AG +S
Sbjct: 356 LMESEILIQTTPVGMAPNTDKTLVPPDFLHQNLLVFDCVYNPLKTQLLKDAEKAGCRTIS 415
Query: 486 GVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
G+EMF+ QA Q+ FT +EA +E M++ L F
Sbjct: 416 GLEMFMIQAREQYKFFTSQEANEEAMKKAALNAF 449
>gi|357512135|ref|XP_003626356.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
gi|355501371|gb|AES82574.1| Dehydroquinate dehydratase/ shikimate dehydrogenase [Medicago
truncatula]
Length = 224
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 141/241 (58%), Gaps = 46/241 (19%)
Query: 119 SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH 178
+H + I SC +D TP E+L LV+ MQATG DIIKLV DITEI RIF L +
Sbjct: 8 NHNIHGKIIASCFVDGITPPTEELLQLVALMQATGTDIIKLVAHAADITEITRIFSLFPY 67
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT 238
CQVP+IAYS+GE GL+SQ L PKF G V GSL P+ GLP++ SL++ YK+EH+NA+T
Sbjct: 68 CQVPLIAYSIGESGLISQFLCPKFGGFFVCGSLARNPIPGLPSLHSLQEAYKLEHVNANT 127
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
+VFGLIS S A
Sbjct: 128 EVFGLIS----------------------------------------SQNQLATAK---- 143
Query: 299 YKEAVMKFCDEVHPLAQAIA--AVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
YKE V++FCDE+HPLAQ + AVNTI R P DGKL+GYNTDCEASITAIEDA+ Y
Sbjct: 144 YKEEVLRFCDEIHPLAQLVLYRAVNTITREPRDGKLVGYNTDCEASITAIEDALIGNSYY 203
Query: 357 N 357
N
Sbjct: 204 N 204
>gi|168699805|ref|ZP_02732082.1| 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase precursor
[Gemmata obscuriglobus UQM 2246]
Length = 520
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 250/498 (50%), Gaps = 24/498 (4%)
Query: 23 EQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEG 82
+ V++ + +A GA +E+RLD + D + + K P + R GG + G
Sbjct: 16 KMVVAELQEAVKRGAKFIELRLDFLAK---AVDFKRLTPLKQCPWVATLRRPADGGRFSG 72
Query: 83 DEHKRLEALHLAEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
+E +R+ + A GA ++VD E +A + +Y + IVS + ETP+ +
Sbjct: 73 NEQERMMIIRQAIASGAFEWVDLETDIAGAV--PRYGK----VKRIVSYHNTAETPA--N 124
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPK 201
L + + M AD+ K+ + ++A++ L P +A+ +G+ G ++ L+ K
Sbjct: 125 LDDIFADMLKQDADVYKIAVAAQSPADVAKVLHLQRTAPKPTVAFCMGDIGQPTRFLALK 184
Query: 202 FNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNP 259
F +Y + + GLP+ + R TY V+ I ADT++FG++ PVGHS P+LHN
Sbjct: 185 FGAPWIYAAFNKERGIAPGLPSFDEFRTTYPVQEITADTQIFGVLGDPVGHSLSPLLHNH 244
Query: 260 TFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317
+R + N +Y+P V L + Y G+SV P+KEA + P
Sbjct: 245 MYRKLGVNALYLPFQVPRGQLSQALEVYGQIPVRGYSVTIPHKEAAAALAKQAEPTVPFT 304
Query: 318 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAG 377
+ NT++RR DG NTD A + +++ + ++ K+G S L+ ++ GAG
Sbjct: 305 GSANTLVRR-DDGAFAAANTDLGAILDSLKAHLAQKS-KDGPFVQLSQLS---VLILGAG 359
Query: 378 GAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATP 437
GA R+ A+G GA++ I ++RA+ LA DV A + N + +L N TP
Sbjct: 360 GAARSAAYGMHREGAQITISARTYDRAQKLAEDVKCKAVDWHARHNVNFD---VLINCTP 416
Query: 438 LGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQ 497
+GMHPN D P L+ +VFD +Y P T L+++A A G ++GV+MF+RQA Q
Sbjct: 417 VGMHPNVDESPCHFSVLKPGAIVFDTIYRPETTLLIREARARGCDTITGVDMFVRQAARQ 476
Query: 498 FNLFTGKEAPKEFMREIV 515
LFTG E MR I+
Sbjct: 477 IELFTGHVPDTETMRTIM 494
>gi|320106134|ref|YP_004181724.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319924655|gb|ADV81730.1| shikimate 5-dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 706
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 245/512 (47%), Gaps = 32/512 (6%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQ--PGKDLEIILTKKPLPVLIV 70
+C P+ A++ ++L + E +E+RLD + Q G+ L+ L+ +PL +I
Sbjct: 21 VCVPIAAKNAGEMLDRAAEVGRE-TPFLELRLDSLEKPQLVTGR-LKQFLSDRPLITMIA 78
Query: 71 Y-RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIV 128
R K GG + G +++E L + G VD E++ A + +G ++
Sbjct: 79 TCRRKANGGDFAGSAEEQMEHLLASAKSGCQIVDMEVETAEALKATALDKLRDAGCVVML 138
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL-SHCQ-VPIIAY 186
S + TP DL + RM D K+V + + + ++ LL H + ++A
Sbjct: 139 SFHDFKGTP---DLDAVYDRMAKFSPDFYKIVPTAKSLPDNLKVTALLEKHAEDANVVAL 195
Query: 187 SVGERGLVSQLLSPKFNGALVYG--SLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLI 244
++G G+++++L P+F +G ++ G +L + Y+++ I A T+++G+
Sbjct: 196 AMGNFGVLTRILGPRFGSVFTFGAATVGEETAPGQVAARTLTELYRMDGIEASTRIYGVA 255
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
PV S P++ N FR N +YV + D+K G SV P K ++
Sbjct: 256 GSPVTSSLSPLMINTAFRRETVNAVYVALETGDVKDLLKVMEKLPIHGVSVTMPLKTDIL 315
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
++ PL+ I A NT++R DGKL G+NTD + +E +
Sbjct: 316 AHLEKTDPLSAKIGACNTVVRA-QDGKLYGFNTDVGGIVGPLERRV-------------- 360
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PL G ++ GAGG RA FG K +GA V I + E+A+ LA GA D
Sbjct: 361 PLRGAKVLVLGAGGVARAAVFGLKDKGAEVSILNRTPEKAQKLARQA-GAKVMRRD--QL 417
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
+ ++ NATP GM P+S E L + L+FD VY P +T L++ A + +V
Sbjct: 418 AKTRFDVVINATPYGMLGQKIAAPISAEEL-NTGLLFDLVYNPIETPLVRLARSKNIAVV 476
Query: 485 SGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
GVEMF++Q QF ++TGK AP+E M +VL
Sbjct: 477 LGVEMFVQQGARQFEIWTGKPAPQEEMLRVVL 508
>gi|449497737|ref|XP_004160503.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
dehydrogenase, chloroplastic-like [Cucumis sativus]
Length = 213
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 146/216 (67%), Gaps = 7/216 (3%)
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
+E +KF D PLA AVN ++RR SDGKL GYNTDC +I+AIED + G N +
Sbjct: 2 EELNLKFVD---PLA--TGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDS 54
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
+ S LAG++ V+ GAGG G+A+A+GAK +GAR+VI + F+RA+ LA V G +
Sbjct: 55 FAVSSRLAGKLVVVIGAGGVGKAVAYGAKQKGARIVIANRSFDRARELADRVGGQSVSLA 114
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
D+ NF PE G IL NATP+GM P D P+ + L+ Y LVFDAVYTPR TRLL++AE +
Sbjct: 115 DLENFHPEDGMILVNATPIGMQPKVDETPIPKHALKRYSLVFDAVYTPRMTRLLREAEES 174
Query: 480 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
GA IV G+EMF RQA Q+ FTG APKE +R+ +
Sbjct: 175 GAAIVPGLEMFTRQAYEQYEGFTGLPAPKERIRKFL 210
>gi|116626199|ref|YP_828355.1| shikimate dehydrogenase [Candidatus Solibacter usitatus Ellin6076]
gi|116229361|gb|ABJ88070.1| shikimate dehydrogenase / 3-dehydroquinate dehydratase [Candidatus
Solibacter usitatus Ellin6076]
Length = 509
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 256/519 (49%), Gaps = 36/519 (6%)
Query: 7 TKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII---LTKK 63
T++ IC L V +L + + G +E RLD ++N P K E I L +
Sbjct: 4 TRSLPRICIALGLPDVPTLLDHARREAEAGEVFLEFRLDYLSN--PCKGAEAIGKFLEEF 61
Query: 64 PLPVLI-VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS 122
P +L+ R G + G ++L L LA GA +D E++ A I + + +
Sbjct: 62 PECILLATCRRHQNHGKFNGSIEEQLAVLDLAVRNGAHAIDVEIETA-EIAQDRLNQFRG 120
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVP 182
T+ IVS + TP + + V ++QA I+ +D + + + L+ +V
Sbjct: 121 RTQVIVSYHNFEATPPMDTVVNRVMKVQADAYKIVSTARKPSDNVRVLAVAKALTKHRVI 180
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGS---LKGTPVLGLPTVESLRQTYKVEHINADTK 239
++A +GE G +++LSP F G Y + +GT G + LR Y+VE + K
Sbjct: 181 VLA--MGELGFPTRVLSPVFGGVFTYAAPIYAEGTAA-GQVSARYLRHLYRVEKLGKSAK 237
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 297
++G+I+ P+ HS P +HN F+ + +Y+P V L+ FFS + +GFSV
Sbjct: 238 IYGVIADPIRHSISPAVHNRAFQSRRVDAVYLPFLVAPACLRDFFSLAAKLPLSGFSVTI 297
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+ ++++ D V PLA+ I AVNT+ R+ GK G NTD + +K
Sbjct: 298 PHKQKIIRYLDIVDPLARRIGAVNTVWRKA--GKWRGTNTDAAGVTGPLSRLLK------ 349
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
++ ++ G GGA R+ A GA++ + + +R ++L S + GA
Sbjct: 350 --------ISKASVLIVGNGGAARSAACALSDAGAKISLVGRNPDRVRAL-SKICGAESL 400
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
+ L+ + + +ATPLGM P+ + ++ D +VFD VY P +T L++ A+
Sbjct: 401 LREQLDSRHFDAVV--HATPLGMFPHVNECFFEDKIPAD--IVFDMVYNPLETVLVQRAK 456
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G I+V G++MF+ QA+ QF ++TG+ AP+ M + L
Sbjct: 457 EQGKIVVPGLDMFIEQAVRQFEIWTGETAPRPVMLKAAL 495
>gi|85859660|ref|YP_461862.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
gi|85722751|gb|ABC77694.1| shikimate 5-dehydrogenase [Syntrophus aciditrophicus SB]
Length = 292
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 147/276 (53%), Gaps = 19/276 (6%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
+ L+ PVGHS P++H+ +H++ G Y V DL + F G SV PY
Sbjct: 24 LLALLGHPVGHSLSPLMHSTALKHLHLEGRYEAWDVSDLSQAMVDLKRKGFRGASVTIPY 83
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K +M F D++ A++I AVNT+IRR DG +G NTD E I A+ RG
Sbjct: 84 KRDIMSFLDDIDEQARSIGAVNTLIRR-GDG-FVGANTDWEGLIRALRSVTSIRG----- 136
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
R FV+ GAGG RA +G G V+ + +R + LA D + P
Sbjct: 137 ---------RRFVVLGAGGTARAALYGILGEGGGAVVVNRTEKRGRELADDFGCPSYPLT 187
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
+I Q G +L N TP+GM PNT+ PV L + LV D +YTP +TRLL++AE A
Sbjct: 188 EIDTLQ---GDVLINTTPVGMTPNTEVSPVPSAVLSRFSLVADVIYTPLRTRLLREAERA 244
Query: 480 GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
G ++SGVEMF+ Q QF L+TG E P + MR++V
Sbjct: 245 GCTVLSGVEMFVEQGAAQFRLWTGLEPPVDLMRQVV 280
>gi|328952377|ref|YP_004369711.1| shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
gi|328452701|gb|AEB08530.1| Shikimate dehydrogenase [Desulfobacca acetoxidans DSM 11109]
Length = 275
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I T +FG++ +PV HS P +HN F + N +YVP V DL + G
Sbjct: 2 ITGATIIFGILGRPVAHSLSPAMHNAAFAALGLNAVYVPFAVQDLVAAVQGLRGLNIGGV 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE ++ DEV AQ I AVNT++ R G L G NTD + ++T +++ I
Sbjct: 62 SVTIPFKEEIIPLLDEVDEEAQTIGAVNTVVNR--QGWLWGCNTDWQGALTPLQEQIA-- 117
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
L+G+ ++ GAGGAGRA+ + + V + D++ +RA++LA +
Sbjct: 118 ------------LSGQQIMVLGAGGAGRAIVYAVRRAAGLVTVADLNPDRARNLAQEFGV 165
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
A P E+I +L NA+P+GM P+ + P+ L +Q+V D VY P +TRLL
Sbjct: 166 ACLPLEEI---DQSTATVLINASPVGMAPHIEATPLPARCLDRFQVVMDIVYQPLQTRLL 222
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
++A A GA + G++M + Q QF LFTG+ +P E MR L
Sbjct: 223 REAAARGARTIDGLQMLIHQGARQFELFTGQPSPVETMRRAAL 265
>gi|347755767|ref|YP_004863331.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588285|gb|AEP12815.1| shikimate 5-dehydrogenase [Candidatus Chloracidobacterium
thermophilum B]
Length = 514
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/524 (29%), Positives = 242/524 (46%), Gaps = 49/524 (9%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVL 68
MIC P+ A + + +L+ + A A AD +E+RLD ++N + L +L ++P PV+
Sbjct: 1 MICTPIAASTPDDLLAALPVAAAA-ADWLELRLDALHNLSVEAVLRALHHVLPRRPRPVV 59
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
+ +RP+ GG + RL H A A+ D E + + +L H R +V
Sbjct: 60 VTFRPREQGGFRDLSHADRLRFWHSALTTPAEAFDLETDLIAQLLPTYPPDHPVWARVVV 119
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--------- 179
S + TP+ D+ A +KL VN ++ R+F L+
Sbjct: 120 SHHDFQATPA--DIHAFALAHFPPHAGTVKLAVKVNQPDDVCRLFDWLTGTPSATPSTWQ 177
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGS-LKGTPVL-GLPTVESLRQTYKVEHINAD 237
++P+ +G G+++++L P + Y + G V G T LR+T+++ ++
Sbjct: 178 KIPV---GMGGLGVLTRILGPAYGARWTYSTGHDGRAVAPGQLTATELRETFRLSSLDRH 234
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP------- 288
T V GL+ PV HS LHN F H+ N +Y+P+ V DDL F P
Sbjct: 235 TIVAGLLGCPVAHSLSKDLHNAAFAHLGLNWVYIPVEVSPDDLAPFLRDAIHPRTRRLPW 294
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G+SV P+K A++ + D + A + AVNTI+ S +LIG NTD ++
Sbjct: 295 TVGGYSVTLPHKVAILPYLDRLTATAARVGAVNTILV--SGQELIGDNTDVAGAM----- 347
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 408
R + A G P+A + GAGGA +A+ G + GA+V +F RA+ L
Sbjct: 348 ----RPLQQRFAVEGEPVA-----VLGAGGAAQAVVCGLVAAGAQVTVFARHPARAQDLG 398
Query: 409 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVFDAVYTP 467
+ P +D F + L N TP+GM + PV E L V+D +Y P
Sbjct: 399 ARFDVPIVPLDD---FHGRRFVGLVNTTPVGMAGYAEGACPVPPERLEGLAWVYDLIYRP 455
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
R T LL+ A G + G+ M + QA Q +TG++ P+ +
Sbjct: 456 RHTALLQAASQQGIATLDGLPMLIAQAAEQLARWTGRDVPETIL 499
>gi|94263740|ref|ZP_01287547.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93455840|gb|EAT06003.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 156/286 (54%), Gaps = 19/286 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T+V+G+I PV HS P++HN F N Y+P D + + + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+K+AVM D++ P+A AI AVNTI+R+ DG+L GYNTD + A+E +
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
LAG ++ GAGG+ RA+ FG K GAR+ + E + LA+ +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGC 167
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
P + + Q + L NAT +GM P D+ P+ L ++ +V D VY+P T+LL
Sbjct: 168 PWLPLAEAGDRQADA---LVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATKLL 224
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++A AAG + G++M L Q QF L+TG++AP E MRE +L+
Sbjct: 225 QEARAAGCRTIDGLQMLLHQGAAQFELWTGQQAPLEVMRESMLSGL 270
>gi|94971136|ref|YP_593184.1| 3-dehydroquinate dehydratase [Candidatus Koribacter versatilis
Ellin345]
gi|94553186|gb|ABF43110.1| 3-dehydroquinate dehydratase / shikimate dehydrogenase [Candidatus
Koribacter versatilis Ellin345]
Length = 613
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 244/516 (47%), Gaps = 42/516 (8%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGA----DVVEIRLDCINNFQPGKDL---EIILTKKPL 65
+C ++ + E+++ AKAEG +E RLD + N P L + +L +P
Sbjct: 19 VCVAVIGATPEEMI-----AKAEGIIRENPFLEFRLDYLTN--PAAALPKVKRLLETRPD 71
Query: 66 PVLI-VYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT 124
V+I R GG ++G +LE L A G +D EL+ A ++ + +
Sbjct: 72 AVIIGTCRRAVNGGKFKGSASAQLEILAKAAAAGCQLLDVELETAESVKASELQKLREAA 131
Query: 125 RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPII 184
I+S + T +D+ + ++ ++ S+ D ++ + + H +I
Sbjct: 132 SIILSFHDFKATKKLDDILARMVKIHVEYYKVVSTATSLYDNVQMMKFLEKHGH-DYWLI 190
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTKVFG 242
+GE+G++S++LS + + + G T LR T++++H++A T V+G
Sbjct: 191 GLCMGEQGIISRVLSVRAGSVFTFAAASAGEETAPGQVTYRDLRSTFRIDHVDAATHVYG 250
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEA 302
+ PV HS P + N FR N NG+Y+ + + G S+ P+KE
Sbjct: 251 VAGDPVAHSLSPAMMNLAFRRENVNGVYLALHTKKTDDLMACIRDIPLRGLSITMPHKEE 310
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
++K L + I AVNTI+ R DGKL G+NTD + + D I G K
Sbjct: 311 MVKHLANTDDLVRKIGAVNTIV-RAQDGKLYGFNTDVAGIVGPLSDRITVTGAK------ 363
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI- 421
++ GAGGA RA FG +RGA + I + +A+ LA + D+
Sbjct: 364 --------ILVVGAGGAARAAVFGLAARGAHISIVNRTVPKAQKLAKEAGAKVVKRADLK 415
Query: 422 -LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
L+F ++ NAT +GM N P+ + LR ++VFD VY P TRL++ A+A G
Sbjct: 416 KLDFD-----VIINATSVGMM-NPKVSPLEADELR-ARIVFDMVYNPVNTRLIQLAKAKG 468
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ G EMF++Q QF +++GK AP E MR IV+
Sbjct: 469 LATIPGYEMFVQQGARQFEIWSGKPAPVEEMRGIVM 504
>gi|322436187|ref|YP_004218399.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
gi|321163914|gb|ADW69619.1| shikimate 5-dehydrogenase [Granulicella tundricola MP5ACTX9]
Length = 571
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 213/449 (47%), Gaps = 29/449 (6%)
Query: 77 GGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTRFIVSCNLDCE 135
GG Y+G LE L A + G VD EL+ A + + IVS + +
Sbjct: 81 GGRYKGSAASELEILVEAANSGFQIVDLELESAEALKSAGIDKIRATSAGLIVSWHDFEK 140
Query: 136 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPIIAYSVGERGL 193
TP DL + +R+ D +K+V + +T+ ++ + + + I+ +G+ G+
Sbjct: 141 TP---DLDKVYARIAPFEPDFVKIVPTAQCLTDNVKLMRFIERMSDEASIVGVCMGDSGI 197
Query: 194 VSQLLSPKFNGALVYG--SLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHS 251
+S++L + + ++ G +L +TY++ ++A TKV+G+ PV S
Sbjct: 198 ISRVLGVRAGSTFTFAAATVGEETAPGQILARTLLETYRIAEVDAATKVYGVAGDPVNKS 257
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
P++ N FR N +Y+ + D+ G S+ P+K+++M
Sbjct: 258 LSPLMMNTAFRRETVNAVYLALQATDVTDLVKLIQEIPIQGVSITMPHKQSIMAHLAHTD 317
Query: 312 PLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
PL+ I A NT++R P KL G+NTD + + ++ I+ +G K
Sbjct: 318 PLSAKIGACNTVLRVPPSAGEPAKLYGFNTDVQGILIPLQKRIELKGAKA---------- 367
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
++ GAGG+ RA F + +GA V I + E A LA E +L +
Sbjct: 368 ----LVLGAGGSARAAVFALRDKGAEVFILNRTLETAAKLAKQSGAKVIKREALLKSTFD 423
Query: 428 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 487
++ NATP+GM + ++ L+ +LVFD VY P T LLK A + G +++GV
Sbjct: 424 ---VIINATPVGMSGQSVEPILTAAELKTTKLVFDLVYNPVDTPLLKQARSLGLSVITGV 480
Query: 488 EMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
EMF++Q QF ++TGK AP++ M ++V+
Sbjct: 481 EMFVQQGARQFEIWTGKPAPEDEMLKVVI 509
>gi|94266091|ref|ZP_01289808.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
gi|93453336|gb|EAT03770.1| Quinate/Shikimate 5-dehydrogenase [delta proteobacterium MLMS-1]
Length = 273
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 155/286 (54%), Gaps = 19/286 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T+V+G+I PV HS P++HN F N Y+P D + + + AG
Sbjct: 4 IDGQTEVYGIIGNPVRHSLSPLIHNAAFAACGLNKAYLPFPALDAAAAVAALRALEIAGV 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+K+AVM D++ P+A AI AVNTI+R+ DG+L GYNTD + A+E +
Sbjct: 64 SVTIPHKQAVMAALDDIDPVAAAIGAVNTIVRQ--DGRLHGYNTDWLGANRALEAELA-- 119
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
LAG ++ GAGG+ RA+ FG K GAR+ + E + LA+ +
Sbjct: 120 ------------LAGASILVLGAGGSARAIGFGLKEAGARLTLASRTPESGRQLAAQLGC 167
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
P + + Q + L NAT +GM P D+ P+ L ++ +V D VY+P TRLL
Sbjct: 168 PWLPLAEAGDRQADA---LVNATSVGMSPAADQSPLPAAALGNFPVVMDIVYSPLATRLL 224
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++A AAG + G++M L Q QF L+T ++AP E MRE +L+
Sbjct: 225 QEARAAGCRTIDGLQMLLHQGAAQFELWTDQQAPLEVMRESMLSGL 270
>gi|451945874|ref|YP_007466469.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
gi|451905222|gb|AGF76816.1| shikimate dehydrogenase [Desulfocapsa sulfexigens DSM 10523]
Length = 273
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 148/280 (52%), Gaps = 19/280 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T ++G+I PV HS P +HN + + +Y+P D+ + G
Sbjct: 3 ISGTTVLYGIIGNPVTHSLSPAMHNAALAALGIDAVYLPFPASDIAAAVTGIRGLGIQGL 62
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE+VM D V P+A I AVNTI+ ++ L G NTD + A+E+ I
Sbjct: 63 SVTIPHKESVMALLDTVDPVAVKIGAVNTIVN--TEKVLTGLNTDWLGATRALEEEID-- 118
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
L+G V+ GAGG+ RA+ FG +GA + + R + LA ++
Sbjct: 119 ------------LSGAHAVILGAGGSARAIGFGLLEKGASITLCSRTESRGRRLADELHC 166
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
P+ + +G +L NAT +GM P + PVSEE +Q+V D VY P KTRLL
Sbjct: 167 ---PWISLEESDRLRGDVLINATSVGMVPQIENTPVSEEVTSQFQVVMDIVYAPMKTRLL 223
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
++AEA G I++G+EM L Q + QF ++TGK+AP MR+
Sbjct: 224 REAEAGGCKIINGLEMLLYQGVAQFEIWTGKDAPVSVMRK 263
>gi|218779608|ref|YP_002430926.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
gi|218760992|gb|ACL03458.1| shikimate 5-dehydrogenase [Desulfatibacillum alkenivorans AK-01]
Length = 274
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 144/283 (50%), Gaps = 19/283 (6%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAG 292
IN+ T+++ + PV HS P +HN F H+ N Y+ V D++ + D G
Sbjct: 4 EINSLTRLYAVFGDPVAHSLSPAMHNRAFTHIGENAAYMAFRVKDVQGAVRAIRAFDMGG 63
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
SV P+K +VM+ DEV A+A+ AVNTI+ G+LIG N+DC ++ AI++
Sbjct: 64 ASVTIPHKISVMEHLDEVDETARAMGAVNTIVN--DQGRLIGKNSDCLGAVKAIQEK--- 118
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 412
+P+ G+ V+ GAGGA RA+ +G K GARV I + E+ LA ++
Sbjct: 119 -----------TPVKGKDVVVIGAGGAARAVIYGLKQEGARVTIVNRTMEKGAQLAEELG 167
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
+P ED+ I NAT +GM PN P L D VY P TR
Sbjct: 168 VDFQPMEDLGKLDCR---IAVNATSVGMVPNVQDSPAPASLFNKEMLAMDIVYRPLLTRF 224
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
L DA AG IV G+ MF+ Q QF +TGKEAP MRE V
Sbjct: 225 LSDARDAGCTIVDGIAMFVYQGASQFEWWTGKEAPVAQMRETV 267
>gi|51246864|ref|YP_066748.1| shikimate 5-dehydrogenase [Desulfotalea psychrophila LSv54]
gi|50877901|emb|CAG37741.1| probable shikimate 5-dehydrogenase [Desulfotalea psychrophila
LSv54]
Length = 296
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 148/278 (53%), Gaps = 19/278 (6%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
T V+G+I PV HS P++HN F + + +YVP V+D++ + G SV
Sbjct: 19 TAVYGIIGNPVSHSMSPLMHNAAFESLGIDAVYVPFRVEDVESAVQGLRGLNICGVSVTI 78
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGY 355
P+KEAV+ DEV P+A I AVNTI+ DG+ L G+NTD + A++ +
Sbjct: 79 PHKEAVIPLLDEVDPVAGKIGAVNTIVSSMRDGRPFLKGFNTDWIGANRALQAVVS---- 134
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
L G+ +L GAGG+ RA+ FG GA V++ R + LA +
Sbjct: 135 ----------LKGKQVLLLGAGGSARAIGFGLLEAGAEVILCSRTPSRGRQLADEFGCLW 184
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
EDI + + + I+ NAT +GM P D ++ E L + V D VY+P +TRLL +
Sbjct: 185 LSLEDIGSVRAD---IVVNATSVGMAPQEDVSLMTVEQLSGVEAVMDIVYSPHRTRLLAN 241
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
A+ AG IVSG+EM L Q + QF L+ G+EAP MR
Sbjct: 242 ADKAGCAIVSGLEMLLYQGVQQFELWQGREAPLAVMRH 279
>gi|224369347|ref|YP_002603511.1| hypothetical protein HRM2_22490 [Desulfobacterium autotrophicum
HRM2]
gi|223692064|gb|ACN15347.1| AroE1 [Desulfobacterium autotrophicum HRM2]
Length = 271
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 160/283 (56%), Gaps = 19/283 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
+N+DT+++ L PV HS GP++HN F+ N NG+Y+ V + ++ + AG
Sbjct: 2 LNSDTRLYALFGDPVAHSLGPVMHNAAFQKANINGVYLAFRVPRIDDAIASMKALGIAGA 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE V+ D + PLA+ + AVNTII R DG L GYNTDC ++ +E
Sbjct: 62 SVTIPHKETVIPLLDRIDPLARGMGAVNTIINR--DGMLFGYNTDCMGAVDPLEGVCD-- 117
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
L GR V+ GAGGA RA+AFG + +GA I + +R ++LA ++
Sbjct: 118 ------------LKGRRVVVLGAGGAARAVAFGIRQQGAIPFIVNRSIKRGRTLADELGA 165
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
A P DI P+ I+ NAT +GM P+ D +P+ E L+ +V D VYTP +T L+
Sbjct: 166 AFIPKADIATVDPD---IIVNATAIGMAPDNDAIPLDPEILKPGMVVMDIVYTPVRTALI 222
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
K A G ++ G+ MF+ Q QF LFTGK+AP + M+ ++L
Sbjct: 223 KAAAERGCTVIDGMAMFVNQGALQFELFTGKKAPIQTMKSVLL 265
>gi|338733093|ref|YP_004671566.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Simkania negevensis Z]
gi|336482476|emb|CCB89075.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,
chloroplastic [Simkania negevensis Z]
Length = 493
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 231/479 (48%), Gaps = 43/479 (8%)
Query: 38 DVVEIRLDCINNFQPGKDLEIILTKKPL---PVLIVYRPKWAGGLYEGDEHKRLEALHLA 94
+ +E+RLD + KDLE + K L PV+ R K GG ++G E +R L
Sbjct: 25 EAIELRLDLL------KDLEHVSKLKSLCKLPVIFTLRKKAQGGEFQGSEQEREAKLLEL 78
Query: 95 EDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154
L DYVD E V + K HQS + C+ + ++L ++++M A
Sbjct: 79 LTLKPDYVDLEFDVDPSFAKK---VHQSFPDVAIICSYHDFDKTPDNLENVLTQMTQMRA 135
Query: 155 DIIKLVFSVNDITEIARIFQLLSHCQ---VPIIAYSVGERGLVSQLLSPKFNGALVYGSL 211
I K+ N + R+ + + + + S+G G ++++L+P + L Y SL
Sbjct: 136 SIYKIATFANSSLDSLRMLSFILQKRREGISLAGMSMGPHGDITRILAPIVDSLLTYTSL 195
Query: 212 ----KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYN 267
K P G V++L + Y+ +N TKV+ LI PV S G HN F+ + N
Sbjct: 196 SSEEKTAP--GQVPVDTLEKIYRFSTLNQQTKVYALIGDPVEQSIGHFAHNTLFKKLKEN 253
Query: 268 GIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325
+YV + V +++ FF + F GFSV P KE V + D ++P A+ I A+NT+
Sbjct: 254 AVYVKILVRSEEVGPFFQLLKTLPFHGFSVTMPLKEKVGEHLDHINPQAKKIGAINTL-- 311
Query: 326 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
++G+ G+NTD ++ AIE+ +AG+ V+ GAGGA RALA+
Sbjct: 312 NLNEGRWEGFNTDASGALDAIEEK--------------RQVAGKKVVILGAGGAARALAY 357
Query: 386 GAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD 445
RG V+I + E+AK LA + E + IL N TP+GM
Sbjct: 358 ETIERGGEVLIVNRTEEKAKKLARQLGCEGVALE---RWTKPSYDILMNTTPVGMTTKGL 414
Query: 446 RVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
+ +SE+ L +VFDA+ P++T LL A+ G IV G EMF RQA+ Q ++ +
Sbjct: 415 SL-ISEKALLKNAVVFDAIMYPKETPLLILAKNKGCQIVYGNEMFTRQAVKQAEIWLNR 472
>gi|308271588|emb|CBX28196.1| hypothetical protein N47_G35200 [uncultured Desulfobacterium sp.]
Length = 289
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 25/300 (8%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-P 288
K+ I +TK+ +I P+ HS P +HN + ++ + +YV V+D+K + +
Sbjct: 3 KLTSIGTNTKLCAVIGNPISHSLSPAIHNAGYDALDLDFVYVSFRVEDIKNALAGMRALE 62
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+F G SV P+K A++ DE+ L + I ++NT+I GKLIG TD ++ AI D
Sbjct: 63 NFRGMSVTIPHKIAIIDLVDEISDLDRNIGSINTVINEK--GKLIGLGTDGPGALKAIRD 120
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRG-ARVVIFDIDFERAKS 406
A G L G+ ++ G+GGA RA+AF A++ G ++ + DID
Sbjct: 121 A-------------GVNLEGQKVLMIGSGGAARAIAFTLAQNAGLEKLTLLDIDAAMMNK 167
Query: 407 LASDVMGAARPF-------EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
LASD+ + + L+ ++ ++ + TP+GMHP D V + + Q+
Sbjct: 168 LASDLKAGTKAIIESDMLTDTSLSANMKQADLVIHCTPVGMHPKEDASLVPPQLFKPGQV 227
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+FD VYTP KT+LLK+A+ G +SGVEMF+ QA+ QF FTG +AP+E MR +V+ +
Sbjct: 228 IFDVVYTPLKTKLLKEAQMHGLKTISGVEMFINQAVLQFERFTGADAPEEVMRRVVMERL 287
>gi|225873819|ref|YP_002755278.1| 3-dehydroquinate dehydratase [Acidobacterium capsulatum ATCC 51196]
gi|225794474|gb|ACO34564.1| 3-dehydroquinate dehydratase, type I domain/shikimate
5-dehydrogenase domain protein [Acidobacterium
capsulatum ATCC 51196]
Length = 800
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 246/517 (47%), Gaps = 35/517 (6%)
Query: 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL----EIILTKKPLP 66
+ +C + A S ++++ +A E +E RLD + N P + + + +
Sbjct: 75 SRVCVAIAASSPDELIEKAREAAREN-PFLEFRLDYLPN--PAAAISRIQQFLYELGEVT 131
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS-GTR 125
+ R + GG ++G ++ L A G D +D E++ A + + + +S G
Sbjct: 132 AIATCRREPNGGKFKGSIEAEIQILEKAIAAGCDLIDIEIETAEKLKAAELARIRSLGAA 191
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ--VPI 183
I+S + + + DL + ++Q D +K+V + + + + L +
Sbjct: 192 LIISYH---DFKATRDLDRMFEKIQRYSPDFVKMVSTATCLADNLAMMHFLERSSDAANV 248
Query: 184 IAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTV--ESLRQTYKVEHINADTKVF 241
+ +GE+GL+S++L + + S + G + +L + ++++ ++ T+V+
Sbjct: 249 VGICMGEQGLISRVLGVRAGSVFTFASAQAGEETGPGQIAARTLHEIFRIDQVSPATRVY 308
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G++ PV HS P++HN FR N +++P+ + L G +V P+K
Sbjct: 309 GVVGNPVMHSLSPLIHNLAFRRETVNAVFLPLQANTLSDVLRLVKEVPLHGLAVTMPFKG 368
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
++K L++ I A NT++ R DG L G+NTD A + +E +
Sbjct: 369 EILKHLTNTDALSEKIGACNTVV-RALDGNLYGFNTDVAAVVRPLERRL----------- 416
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 421
PL ++ GAGGA RA FG K +GA V I + E A+ LA +E +
Sbjct: 417 ---PLRDARVLVIGAGGAARAAVFGLKDKGADVTIVNRTPETAQKLARQAKARTIRYEQL 473
Query: 422 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 481
+ ++ NATP+GMH + + + + L + +LVFD VY P +T LL+ A G
Sbjct: 474 AKASFD---VILNATPIGMHGHKQQSWLKPDQL-NARLVFDMVYNPIETPLLRMAREKGL 529
Query: 482 IIVSGVEMFLRQAIGQFNLFTGKEAPK-EFMREIVLA 517
+++GVEMF++Q QF ++TGK AP+ E +R +V A
Sbjct: 530 PVITGVEMFVQQGARQFEIWTGKPAPEDEMLRAVVHA 566
>gi|386346035|ref|YP_006044284.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
gi|339411002|gb|AEJ60567.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6578]
Length = 491
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 233/504 (46%), Gaps = 35/504 (6%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C L ++ E+ + + + E D+VE+R DC++ + L + LP ++ R
Sbjct: 5 VCLSLTGRTKEEAEEQLARWR-EKVDLVEVRADCMDE-SAWEGLGEWASGLGLPAILTLR 62
Query: 73 PKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
GG +EG E EAL L G YVD E A ++ + + G I S +
Sbjct: 63 SDRDGGFFEGTEDVHDEALGELVRQGGWAYVDVEAWAADWLVDE---VRRRGMHVIRSRH 119
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIK----LVFSVNDITEIARIFQLLSHCQVPIIAY- 186
+ P EDL + + ++ G ++ ++ D+ + R+ + ++ +P +Y
Sbjct: 120 VMDGVP--EDLEHWM--VETAGQGLVPKAACMLGGTEDLLRLVRLHRRITAEGLPPGSYI 175
Query: 187 --SVGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVEHINADTKVFGL 243
+G G+ S++LS + L + S G T G + Y+V ++ T +FG+
Sbjct: 176 LLGMGPYGVPSRILSLAWGSLLTFSSDPGRTAAPGHLDPGVMADLYRVRELSESTVLFGV 235
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
I PV HS+ P LHNP +R + +Y+P+ VDDL F G SV P+KE V
Sbjct: 236 IGNPVLHSRSPHLHNPVYRREGMDAVYLPIQVDDLTSFMDLADELSLQGLSVTIPHKEGV 295
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
+ F P+ QA+ + NT++RR DG G +TD E + + + I A G
Sbjct: 296 IPFLTVRDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPLREEI---------ARGG 344
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV---MGAARPFED 420
P+ VL GAGGA RA+ +G G RV++ + ERA+ LA + GA P E
Sbjct: 345 DPVMKAAVVL-GAGGAARAVVYGLVQEGFRVLVLNRTEERARVLAEEFGVDWGALSP-ES 402
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ +G I+ T +GM PV ++ +D VYTPR T L+ A AG
Sbjct: 403 AERMREFRGLIV-QTTSVGMEGKEPASPVPWYRFEGDEICYDIVYTPRITPFLEAARRAG 461
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGK 504
I++G M QA Q LF +
Sbjct: 462 CRIITGDRMLEAQAEEQMRLFAAR 485
>gi|262181533|gb|ACY29657.1| 3-dehydroquinate dehydratase 02 [Vitis vinifera]
Length = 187
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 121/185 (65%), Gaps = 2/185 (1%)
Query: 96 DLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGAD 155
+LGADYVD ELKVA + + + IVS + TPS EDLG LV +QATGAD
Sbjct: 2 ELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGAD 61
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTP 215
I+K+ + +IT++ARIFQ+ H QVP+I +GERGL+S++L PKF+G L +GSL+
Sbjct: 62 IVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGI 121
Query: 216 VL--GLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM 273
V G PT++ L Y + DTKVFG+I KPV HSK P L+N F+ V +NG+YV +
Sbjct: 122 VSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHL 181
Query: 274 FVDDL 278
VDD+
Sbjct: 182 LVDDI 186
>gi|390986545|gb|AFM35792.1| hypothetical protein, partial [Oryza eichingeri]
Length = 156
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 197 LLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGP 254
+L PKF G L +GSL KG PT L Y + I DTKV+G+I KPVGHSK P
Sbjct: 1 VLCPKFGGFLTFGSLEKGKESAPAQPTATDLINVYNIRQIGPDTKVYGIIGKPVGHSKSP 60
Query: 255 ILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
ILHN FR V N +YVP VDDL F +TYSS +FAGFS P+KEA ++ CDEV P+A
Sbjct: 61 ILHNEAFRSVGLNAVYVPFLVDDLSNFLNTYSSTEFAGFSCTIPHKEAAVRCCDEVDPIA 120
Query: 315 QAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
+ I AVNTIIR+P +GKL+GYNTD +I+AIED I+
Sbjct: 121 KDIGAVNTIIRKP-NGKLVGYNTDYVGAISAIEDGIR 156
>gi|374315064|ref|YP_005061492.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350708|gb|AEV28482.1| shikimate 5-dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
Length = 497
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 240/518 (46%), Gaps = 36/518 (6%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
M+C L ++E+ + + + + + + E+RLD +N + ++ + +PV++
Sbjct: 1 MLCLTLTGSTLEEDRALVVKNR-KWISLAELRLDYLNP-EEQEEAAVFPNMVDIPVILTL 58
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ------SGTR 125
R GG E +RL+ L+ YVD E + L + S + S R
Sbjct: 59 RRVSDGGRCTLGEKQRLQLLYNTAKGDFAYVDIEEDIKKCDLKFKESGTEIKVDLESSLR 118
Query: 126 F----IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARIFQLLSH 178
I+ D E + G+ +S++ A G DI K+ S+ D+ + R+ Q L
Sbjct: 119 MRNIKIIRSYHDFEKVPADIYGH-ISKLAAKG-DIPKIAVTPKSMIDVISLFRVQQELQG 176
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVY--GSLKGTPVLGLPTVESLRQTYKVEHINA 236
+ II +G+ G+ +++L K L + S + P G + +++ + Y+ + ++
Sbjct: 177 IKDKIII-GMGDFGIPTRILYKKCGSMLTFCTDSSEKVPAPGQLSAQTMSELYRSDKLDD 235
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
T ++G+I PV H+ P++HNP F ++YN +YVP VD ++ FF GFSV
Sbjct: 236 RTHIYGIIGNPVYHTSSPLIHNPGFLAIHYNAVYVPFLVDSVRAFFKLAEMLQIHGFSVT 295
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K V + + + I A NT+ R + K G NTD + I + + +
Sbjct: 296 VPHKRDVQPYLGRITREVKQIGACNTVTRIQNMWK--GTNTDYYGFLAPIAEEVSK---- 349
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
GT ++ GAGGA RA+ + + G +V + + + AKS+AS+ M +
Sbjct: 350 -GTIHSA--------LVIGAGGASRAVIWALHNHGVKVTVINRSLDHAKSIASETMSSYD 400
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
E+ + K ++ T +GM PN PV +LV++ +Y PR+T LK A
Sbjct: 401 SLENCSRYSG-KVDLVVQTTSVGMTPNDTEDPVPALRFLGNELVYELIYHPRETVFLKRA 459
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
AAG +V G +M + Q QF FTG P E+
Sbjct: 460 IAAGCTVVQGRDMLMEQGKLQFEAFTGYHYPHWIHPEL 497
>gi|255291825|dbj|BAH89264.1| putative 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
fragment [Diospyros kaki]
Length = 188
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT--PVLGLPTVESLRQTYKVEHINADTK 239
P I ++GERGL+S++L KF G L +G+L+ G PT+ L Y I DTK
Sbjct: 1 PTIGLAMGERGLISRILCAKFGGFLTFGALESGIHSAPGQPTLRDLLDLYNFRQIGPDTK 60
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
V G+I P+GHSK P L+N F+ +NGIY+P+ VD++ F +TYSSPDF G+S P+
Sbjct: 61 VHGVIGNPIGHSKSPHLYNTAFKKAAFNGIYLPLLVDNVANFLNTYSSPDFTGYSYTIPH 120
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K A ++ CDEV P+A+AI A++ +I++PSDGKLIGYN D +I AIE+ + + +
Sbjct: 121 KMAGLECCDEVDPIAKAIGAISCVIKKPSDGKLIGYNVDYLGAIAAIEEGLGGS--SSAS 178
Query: 360 ASFGSPLAGR 369
SPLAGR
Sbjct: 179 NGSVSPLAGR 188
>gi|339500912|ref|YP_004698947.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
gi|338835261|gb|AEJ20439.1| 3-dehydroquinate dehydratase [Spirochaeta caldaria DSM 7334]
Length = 498
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 250/529 (47%), Gaps = 69/529 (13%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPVL 68
+C L +++ + L + + +A DVVE+R+D ++ D + + P +P +
Sbjct: 4 VCLCLTGKTIVKDLELVDRYRAY-IDVVELRVDFLD-----PDERFYIRRFPALAGIPTI 57
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLG-AD--------YVDFELKVASNILGKQYSS 119
+ R K GG ++ E R+ + LA L AD YVD E + ++ + ++
Sbjct: 58 LTVRRKIDGGNFKEGEGARI--VLLAAGLAFADTDQRRNFAYVDLEEDL--DVPSLEEAA 113
Query: 120 HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC 179
GT+ I S + +E+L + ++ TG +I K+ ++ ++AR+F++
Sbjct: 114 RTFGTKIIRSYH--NFHGVDENLEQKLRSLRRTGDEIAKVAVMPHNYDDVARLFKVADST 171
Query: 180 Q-VPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPT-------------VESL 225
+ + I ++G G+ +++L+ + L + S P+ + + +L
Sbjct: 172 KDMEKILIAMGPHGVSTRILAERLGSHLSFTS----PIAEIESDSEIQVAGPGQLDPRTL 227
Query: 226 RQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY 285
TY+ +N TKV+G+I P+ + P +HN + + N +Y+P V DL FF+
Sbjct: 228 VDTYRFRSLNHKTKVYGIIGYPLSATASPQIHNEGYSRLKMNAVYIPFPVQDLSSFFNLA 287
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
+ + G SV P+KEAV+ +C + P I + NT++R P YNTD +
Sbjct: 288 ETLNIQGLSVTIPHKEAVLTYCSQRSPEVDRIGSCNTLVRAPQG--WAAYNTDAQ----- 340
Query: 346 IEDAIKERGYKNGTASF-GSP-LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER 403
G+ + F G P L + + GAGG +A+A R ++ + R
Sbjct: 341 --------GFSDSLLEFIGKPNLLFKRVTIIGAGGVAKAVASEIHRLKGRALVLNRTPLR 392
Query: 404 AKSLASDVMGA-----ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ 458
AK +A + A AR E I +++ I+ T +GM PN D P+ R +
Sbjct: 393 AKEIAEPLNFAWAGLDARGIELIDHYRD----IIIQTTSVGMEPNIDEDPIELYKFRGKE 448
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
+V D +Y P +T+LLK A AG ++G +M LRQA QF+LFTG+E P
Sbjct: 449 VVMDLIYKPEETKLLKRAAKAGCKTLNGYDMLLRQAKLQFSLFTGQEYP 497
>gi|242085730|ref|XP_002443290.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
gi|241943983|gb|EES17128.1| hypothetical protein SORBIDRAFT_08g016980 [Sorghum bicolor]
Length = 164
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 190 ERGLVSQLLSPKFNGALVYGSL-KGT-PVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
E+G +S++L K+ G L + SL KG G PTV L YK+ I DTKVFG+I P
Sbjct: 3 EQGFISRILCAKYGGYLTFASLEKGKESAPGQPTVSDLINKYKIRQIGPDTKVFGIIGNP 62
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V HSK PI+ N FR V ++ +++P DDL +F ST+S+PD+AGFS P+KE ++ C
Sbjct: 63 VNHSKSPIVQNQAFRSVGFDAVFLPFLSDDLVEFLSTFSAPDYAGFSCTMPHKETALRCC 122
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
D+V P+A+ I A+NTIIRRP DGKL+GYNTD +I+AIED +
Sbjct: 123 DDVDPIARDIGAINTIIRRP-DGKLVGYNTDYSGAISAIEDGL 164
>gi|228993077|ref|ZP_04153000.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
gi|228999127|ref|ZP_04158709.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228760744|gb|EEM09708.1| Shikimate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228766725|gb|EEM15365.1| Shikimate dehydrogenase [Bacillus pseudomycoides DSM 12442]
Length = 277
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 161/289 (55%), Gaps = 24/289 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++MK+ DE+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + E+A L S A
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQ--A 166
Query: 416 RPFEDILNFQP---EKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ L+ + E+G I+ + T +GMHP+ P+ +L+ +V D +Y P +T
Sbjct: 167 KITSQALSLEQATEEQGNYDIIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFET 226
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+LL+DA+A GAI+ +G++MF+ Q F L+TG+ E M+++V+ K
Sbjct: 227 KLLQDAKAKGAIVQNGIDMFVYQGALAFELWTGRMPNIEKMKQLVMRKL 275
>gi|307718011|ref|YP_003873543.1| 3-dehydroquinate dehydratase [Spirochaeta thermophila DSM 6192]
gi|306531736|gb|ADN01270.1| 3-dehydroquinate dehydratase, type 1 [Spirochaeta thermophila DSM
6192]
Length = 491
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 231/502 (46%), Gaps = 31/502 (6%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYR 72
+C L ++ ++ + + + + E D++E+R DC++ + + L + LP ++ R
Sbjct: 5 VCLSLTGRTRKEAETQLARWREE-VDLLEVRADCMDEGE-WEGLGEWASGLGLPAILTLR 62
Query: 73 PKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131
GG +EG E EAL L G YVD E A ++ + + + G I S +
Sbjct: 63 SDRDGGFFEGTEDVHDEALGELIRQGGWAYVDVEAWAADWLVDE---ARRRGMYVIRSRH 119
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY---SV 188
+ P + + + + Q ++ D+ + R+ + L+ +P +Y +
Sbjct: 120 VMDGVPEDLEDWMVETVGQGLVPKAACMLGGTEDLLRLVRLHRRLTARGLPPGSYILLGM 179
Query: 189 GERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
G G+ +++LS + L + S G T G + Y+V ++ T +FG+I P
Sbjct: 180 GPYGVPTRILSLAWGSLLTFTSDPGRTAAPGHLDPGVMADLYRVRELSESTVLFGVIGNP 239
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V HS+ P LHNP +R + +Y+P+ VD+L F G SV P+KE V+ F
Sbjct: 240 VLHSRSPHLHNPVYRREGMDAVYLPIQVDELASFMDLADELPLQGLSVTIPHKEGVIPFL 299
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
P+ QA+ + NT++RR DG G +TD E + + + I A G P+
Sbjct: 300 TVCDPVVQAVGSCNTMVRR--DGGWFGTSTDVEGFLRPLREEI---------ARGGDPVM 348
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV---MGAARP--FEDIL 422
VL GAGGA RA+ +G G RV++ + ERA+ LA + GA P E +
Sbjct: 349 KAAVVL-GAGGAARAVVYGLVQEGFRVLVLNRTEERARVLAGEFGVDWGALSPESAERMR 407
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
F+ ++ T +GM PV ++ +D VYTPR T L+ A AG
Sbjct: 408 EFR----GLIVQTTSVGMEGKEPASPVPWYRFEGDEICYDIVYTPRITPFLEAARRAGCR 463
Query: 483 IVSGVEMFLRQAIGQFNLFTGK 504
I++G M QA Q LF +
Sbjct: 464 IITGDRMLEAQAEEQMRLFAAR 485
>gi|374313118|ref|YP_005059548.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
gi|358755128|gb|AEU38518.1| shikimate 5-dehydrogenase [Granulicella mallensis MP5ACTX8]
Length = 592
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 213/460 (46%), Gaps = 35/460 (7%)
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSS-HQSGTR 125
V+ R K GG +EG L+ L A + G VD EL+ + ++G
Sbjct: 74 VIATCRCKENGGRFEGSNTGALDVLLKAAESGFQLVDIELEAIEKLPKTTMDRLREAGAA 133
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----V 181
I+S + + +DL + +R++ D IK+V + +++ + + L +
Sbjct: 134 VIISHH---DFHGTKDLDAVYNRIEPFAPDFIKVVPTAKSLSDNLTLMRFLERMEDRSKS 190
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKG--TPVLGLPTVESLRQTYKVEHINADTK 239
I+ +GE G++S++L + A + + G +L + Y+++ ++A TK
Sbjct: 191 SIVGICMGEAGIISRVLGLRAGSAFTFAAANAGEETAPGQIAARTLIEDYRIDQVDAATK 250
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
V+G+ P+ S P++ N FR N +Y+ + + F G SV P
Sbjct: 251 VYGVAGNPIRSSLSPLMMNTAFRRETVNAVYLALQATKVDDLFKLVREIPIQGLSVTMPL 310
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA+M + PL+ I AVNT++ R DGK G+NTD + +E + +G K
Sbjct: 311 KEAIMPLLERTDPLSAKIGAVNTVL-RAQDGKFYGFNTDVAGIVGPLERRLSLKGAK--- 366
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
+ VL G A A+ FG + +GA V I + E A+ LA GA
Sbjct: 367 ----------VLVLGAGGAARAAV-FGCRDKGAEVWILNRTPETAQKLARQA-GAKTIKR 414
Query: 420 DI---LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
D + F ++ NATP+GM P+ + ++VFD VY P +T LL+ A
Sbjct: 415 DAVAKMGFD-----VIINATPVGMT-GQKAAPLLQPEDLVARIVFDLVYNPIETPLLRLA 468
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G +SGVEMF++Q QF ++TGK AP+E M +VL
Sbjct: 469 RQKGLTAISGVEMFVQQGARQFEIWTGKPAPEEEMLRVVL 508
>gi|229006675|ref|ZP_04164309.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
gi|228754536|gb|EEM03947.1| Shikimate dehydrogenase [Bacillus mycoides Rock1-4]
Length = 277
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 24/289 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F ++N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEYLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++MK+ DE+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + E+A L S A
Sbjct: 117 --------PLYQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQ--A 166
Query: 416 RPFEDILNFQP---EKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ L+ + E+G I+ + T +GMHP+ P+ ++L+ +V D +Y P +T
Sbjct: 167 KITSQALSLEQATEEQGNYDIIIHTTTIGMHPHIQNTPLQIQSLKQGTIVSDIIYNPFET 226
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+LL+DA+A GAI+ +G++MF+ Q F L+TG+ E M+++V+ K
Sbjct: 227 KLLQDAKAKGAIVQNGIDMFVYQGALAFELWTGRMPNIEKMKQLVMRKL 275
>gi|20093557|ref|NP_613404.1| shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
gi|24211502|sp|Q8TZ24.1|AROE_METKA RecName: Full=Shikimate dehydrogenase
gi|19886404|gb|AAM01334.1| Shikimate 5-dehydrogenase [Methanopyrus kandleri AV19]
Length = 290
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 163/296 (55%), Gaps = 29/296 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-- 291
++A+T V GLI PV HS P +HN F+ + N +Y+ V + + + D
Sbjct: 7 VDAETNVVGLIGHPVEHSLSPAMHNAAFKELGLNYVYLAFDVPPERLEGAVRGAADLGIV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAVM+ CDE+ A+ I AVNT+ R S GK+ G+NTD E + A+ +
Sbjct: 67 GLNVTIPHKEAVMELCDELDRDAELIGAVNTV--RFSRGKIEGFNTDGEGFLRAL----R 120
Query: 352 ERGY--KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLA 408
E Y GT S V+ GAGGA RA++F + GA +VI + +RA+ LA
Sbjct: 121 EETYFDPRGTKS----------VILGAGGAARAVSFKLATEGADEIVIANRTVDRAERLA 170
Query: 409 SD----VMGAARPFE---DILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLV 460
+ V AR D + + +L +ATP+GM+PN D P V+ + + + +V
Sbjct: 171 EELKEKVGVKARAIGLDGDEIERELRDADLLVDATPVGMYPNEDEPPLVTADQMHEDLIV 230
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
D VY P +TRLL++AE AGA VSGV M + Q F L+TG+EAP E MRE VL
Sbjct: 231 NDLVYNPPRTRLLEEAEKAGATPVSGVGMLVYQGALAFELWTGEEAPVEVMREAVL 286
>gi|297568001|ref|YP_003689345.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
gi|296923916|gb|ADH84726.1| shikimate 5-dehydrogenase [Desulfurivibrio alkaliphilus AHT2]
Length = 270
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 152/286 (53%), Gaps = 19/286 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T+V+G+I PV HS+ P +HN F N +YVP+ D + + AG
Sbjct: 4 IDGSTEVYGIIGNPVRHSRSPAMHNAAFAACGLNKVYVPLPALDGAAAVAAIRTLGIAGA 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE V++ D+V P+A I AVNTI+RR + L G NTD + A+ +A++
Sbjct: 64 SVTIPHKETVIEQLDKVDPVAARIGAVNTIVRRGDE--LHGANTDWLGANQALGEALE-- 119
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
LAG +L GAGG+ RA+ FG + GA+V++ ER + LA +
Sbjct: 120 ------------LAGAKVLLLGAGGSARAIGFGLREAGAKVILASRTPERGQELAQQL-- 165
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
P+ + + L NAT +GM P ++ P+ L + +V D VY+P +TRLL
Sbjct: 166 -DCPWVPLEQAAEQAANALVNATSVGMAPLAEQSPLPAAALAAFPVVMDIVYSPLQTRLL 224
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++AEAAG + G+ M L Q QF ++T +EAP MR+ +L
Sbjct: 225 REAEAAGCHCIDGLAMLLYQGAAQFTMWTNQEAPLAIMRQTLLENL 270
>gi|325971052|ref|YP_004247243.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
gi|324026290|gb|ADY13049.1| 3-dehydroquinate dehydratase [Sphaerochaeta globus str. Buddy]
Length = 494
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 237/524 (45%), Gaps = 51/524 (9%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPV 67
M+C L ++E+ + + + + + E+RLD ++ D + I + P +PV
Sbjct: 1 MLCLTLTGSTLEENRA-LVERNRKWISLAELRLDYLH-----PDEQKIASSFPSTVDVPV 54
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNIL-----------GKQ 116
++ R GG E +RL+ L+ A YVD E V L +
Sbjct: 55 ILTLRRSSDGGSCTLSEKQRLQLLYEAAKGDFAYVDIEDDVKKTDLKFKDPLFEQKVDLE 114
Query: 117 YSSHQSGTRFIVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARI 172
S Q + I S N +C P+ D+ +S++ A G DI K+ S+ D+ + R+
Sbjct: 115 QSLKQRHIKIIRSYHNFEC-VPA--DIFGRISKLAAKG-DIPKVAVTPKSMMDVITLFRV 170
Query: 173 FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232
Q L++ + I+ +GE G+ +++L K L + S G + +++ Y+ +
Sbjct: 171 EQELANLKEKIVI-GMGEYGICTRILYKKCGSFLSFCS-DSQAAPGHLSAQTMSTLYRAD 228
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAG 292
++ T +FG+I PV H+ P +HNP F + YN +YVP VD ++ FF G
Sbjct: 229 KLDEKTHIFGIIGNPVYHTASPKIHNPGFEAIRYNAVYVPFLVDSVRAFFKLAEMLQIHG 288
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
FSV P+K +V + + + I + NT++R + K G NTD + I + + +
Sbjct: 289 FSVTVPHKRSVQPYLGRITREVKQIGSCNTVVRIQNMWK--GTNTDYYGFLAPISEQLGK 346
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 412
KN ++ GAGGA RA+ + + G +V I + E A++LAS+ M
Sbjct: 347 GEIKNA-------------LVVGAGGAARAVVWALHNHGVKVTILNRSMEHARTLASETM 393
Query: 413 GAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
F+ + N G ++ T +GM + + ++ ++ VY P++T
Sbjct: 394 ST---FDTLENAHLYNGNCELVVQTTSVGMGNLGNEECIPSFNFTGKEIAYELVYNPKET 450
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
LK A AG I+ G +M + Q QF FTG P +I
Sbjct: 451 LFLKRAMEAGCTIIGGSQMLMEQGKLQFEAFTGYHYPHWIQADI 494
>gi|381179077|ref|ZP_09887939.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
gi|380769025|gb|EIC03002.1| Shikimate dehydrogenase substrate binding domain protein [Treponema
saccharophilum DSM 2985]
Length = 502
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 245/519 (47%), Gaps = 60/519 (11%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPV 67
++C L +++++ + + + D+VE+R DC+ +D + + P +P
Sbjct: 5 LVCLCLTGKTIDEDV-RIAEEYIRYIDMVELRADCLE-----EDERLNIRDFPSLVKVPC 58
Query: 68 LIVYRPKWAGGLYEGDEHKR----LEALHLA-EDLGAD--YVDFELKVASNILGKQYSSH 120
L+ R GG YE E R AL A ED + YVDFE + G Q ++
Sbjct: 59 LLTIRRVADGGKYEEGEASRSMLFARALAFADEDKRKNFAYVDFEDDFI--VPGLQDAAL 116
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF---SVNDITEIARIFQLLS 177
GTR I S + D P + ++ +S+M+ TG +I K+ F S++DIT++ + LS
Sbjct: 117 AFGTRIIRSFH-DMNNPVK-NIAQRLSKMRMTGFEIPKIAFMPKSLSDITDLFKEASALS 174
Query: 178 HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGS----LKGTPVLGLPTVESLRQTYKVEH 233
+ I A S GL +++L+ +FN L + S ++ LG SL Y+
Sbjct: 175 GTEQIICAMSA--FGLPTRVLAQRFNSYLSFTSPAELMENVKGLGHVDPVSLSSLYRFRS 232
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+++T++FG+ P+ + P +HN F N +YVP + ++ F ++ GF
Sbjct: 233 IDSETRLFGITGFPLVATSSPKIHNTIFGENEMNAVYVPFKAEKAEEAFEFANTMGVCGF 292
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE ++ D V Q + A NT++R DGK +G+NTDC E AIKE
Sbjct: 293 SVTVPHKETIIPLLDSVDKGVQEMGACNTVVRE--DGKWLGFNTDC----IGFELAIKEF 346
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA----- 408
++ L+G + GAGGA +A+ + K+ GA IF+ +A+ LA
Sbjct: 347 TGRDS-------LSGMKVSVIGAGGAAKAIVYALKNLGADACIFNRTSVKARKLAEKVGF 399
Query: 409 ------SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
SD + + + D++ KG N+T PN P+ +L++D
Sbjct: 400 NYSGLGSDCIMKLQSYSDLIVQTTSKG---MNSTD---EPNETNDPIWFYDFTGNELLYD 453
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 501
VY P T ++K A AAG + +G+ M Q Q +F
Sbjct: 454 IVYEPNVTPVMKRAAAAGCRVANGLSMLRYQGEEQARIF 492
>gi|406996985|gb|EKE15179.1| hypothetical protein ACD_12C00117G0002 [uncultured bacterium]
Length = 273
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 153/292 (52%), Gaps = 28/292 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV----PMFVDDLKKFFSTYSSPD 289
I+A TK+ +I PV HS P +HN + + +V + + D+ +
Sbjct: 3 ISAKTKICLIIGDPVTHSLSPAMHNAGYEALGIEDKFVFLGANVNIKDVGVTIQSMRKMG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G + P+K VMK DE+ A+ I AVNT++ + +GKLIG+NTD ++ +E
Sbjct: 63 IHGLTCTIPHKIEVMKLLDEIDDTAKMIGAVNTVLNQ--NGKLIGFNTDWLGAVIPLEKI 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 409
+ L+ + ++ GAGGA RA+ FG R A V IF+ E+A LA
Sbjct: 121 --------------TTLSEKKVLVLGAGGAARAVIFGMLKRKAMVTIFNRTKEKATKLAK 166
Query: 410 DV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ M + +I NF I+ N T +GM P D+ P+S + + + Q+VFD VY
Sbjct: 167 EFNCQMTDLKIESEIKNFD-----IIINTTSVGMKPLEDKTPISIKFITNKQIVFDIVYV 221
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
P +T+LL++A+ GA I+ G EM L Q QF ++TG +AP+E MR I++ K
Sbjct: 222 PFETKLLREAKKRGAKIIHGTEMLLHQGTAQFEIYTGHKAPEEVMRRILINK 273
>gi|302339344|ref|YP_003804550.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
gi|301636529|gb|ADK81956.1| shikimate 5-dehydrogenase [Spirochaeta smaragdinae DSM 11293]
Length = 492
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 225/481 (46%), Gaps = 30/481 (6%)
Query: 38 DVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97
+ EIR D + + K L I+ + LP++ R GG+++ E +R++ L A +
Sbjct: 26 ECAEIRFDHLVPEEREKAL-ILPSCSDLPLIATARLPKDGGVWKEGEEERIDLLRKAAES 84
Query: 98 GADYVDFELKVASNILGKQYSSHQSGT--RFIVSCNLDCETPSEEDLGYLVSRMQATGAD 155
G +VD E ++L + + SG R I S + E L +V + GA
Sbjct: 85 GFAFVDLEADQPRSLL-RSFVELLSGYGGRLIASFHDFTSFTDERTLFSMVEEAEGLGAI 143
Query: 156 IIKLVFSVNDITEIARIFQLLSHCQVPI--IAYSVGERGLVSQLLSPKFNGALVYGS-LK 212
V ++ +A L + P I ++G G+ ++ F L + + +
Sbjct: 144 PKAAVMIDGSVSLLAFTRAALKLKERPAERILVAMGSFGVPVRIAYRHFGSMLTFCAPAE 203
Query: 213 GTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP 272
G + E+L Y + I+ +++FG+I PV H++ P +HN FR + ++G+Y+P
Sbjct: 204 KIAAPGQLSAEALAFPYALSRISDKSRLFGIIGNPVLHTRSPEIHNSAFRSIGFDGLYLP 263
Query: 273 MFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKL 332
DD F + GFSV P+KE ++ EV +AI + NT+ RR +
Sbjct: 264 FPTDDTVAFMEIARLLEIGGFSVTVPFKEEIIGRLHEVDENVRAIGSCNTVFRRGHE--F 321
Query: 333 IGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392
G NTD + + ++ + +RG GR ++ G+GGA R++A +S
Sbjct: 322 HGTNTDYDGFLAPLKIRLGKRG-------------GRALMI-GSGGAARSVAVALRSLFD 367
Query: 393 RVVIFDIDFERAKSLASDVMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVP 448
VV+ + RA+ L+ ++G P E+ + P + ++ T +GM P+ D P
Sbjct: 368 SVVVANRTHSRAQRLSEALLGEKGHVCSP-EEAGSLGPYR--VIVQTTSVGMSPHIDDDP 424
Query: 449 VSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 508
+ +LV+D +Y P KT L+ AEA+G I+ G EM L QA QF LFTG PK
Sbjct: 425 LPSYCFTGDELVYDIIYIPEKTHFLQRAEASGCDIIGGKEMLLGQAERQFELFTGLRYPK 484
Query: 509 E 509
+
Sbjct: 485 D 485
>gi|30022412|ref|NP_834043.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206969455|ref|ZP_03230409.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218234390|ref|YP_002369144.1| shikimate 5-dehydrogenase [Bacillus cereus B4264]
gi|228960604|ref|ZP_04122251.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048041|ref|ZP_04193616.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|229111808|ref|ZP_04241354.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|229129615|ref|ZP_04258583.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|229146906|ref|ZP_04275270.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|229152538|ref|ZP_04280728.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|229180612|ref|ZP_04307953.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|296504827|ref|YP_003666527.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|365158876|ref|ZP_09355066.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411869|ref|ZP_17388989.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|423432345|ref|ZP_17409349.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|423631057|ref|ZP_17606804.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|423640585|ref|ZP_17616203.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|423657290|ref|ZP_17632589.1| shikimate dehydrogenase [Bacillus cereus VD200]
gi|81580465|sp|Q818D0.1|AROE_BACCR RecName: Full=Shikimate dehydrogenase
gi|226724116|sp|B7HCW1.1|AROE_BACC4 RecName: Full=Shikimate dehydrogenase
gi|29897970|gb|AAP11244.1| Shikimate 5-dehydrogenase [Bacillus cereus ATCC 14579]
gi|206735143|gb|EDZ52311.1| shikimate 5-dehydrogenase [Bacillus cereus AH1134]
gi|218162347|gb|ACK62339.1| shikimate dehydrogenase [Bacillus cereus B4264]
gi|228602855|gb|EEK60335.1| Shikimate dehydrogenase [Bacillus cereus 172560W]
gi|228630904|gb|EEK87543.1| Shikimate dehydrogenase [Bacillus cereus m1550]
gi|228636505|gb|EEK92971.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|228653732|gb|EEL09602.1| Shikimate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|228671564|gb|EEL26862.1| Shikimate dehydrogenase [Bacillus cereus Rock1-15]
gi|228723285|gb|EEL74655.1| Shikimate dehydrogenase [Bacillus cereus AH676]
gi|228799083|gb|EEM46053.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296325879|gb|ADH08807.1| shikimate 5-dehydrogenase [Bacillus thuringiensis BMB171]
gi|363626246|gb|EHL77243.1| shikimate dehydrogenase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103937|gb|EJQ11914.1| shikimate dehydrogenase [Bacillus cereus BAG3O-2]
gi|401117101|gb|EJQ24939.1| shikimate dehydrogenase [Bacillus cereus BAG4O-1]
gi|401264424|gb|EJR70536.1| shikimate dehydrogenase [Bacillus cereus VD154]
gi|401279646|gb|EJR85568.1| shikimate dehydrogenase [Bacillus cereus VD166]
gi|401290033|gb|EJR95737.1| shikimate dehydrogenase [Bacillus cereus VD200]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|423650199|ref|ZP_17625769.1| shikimate dehydrogenase [Bacillus cereus VD169]
gi|401282617|gb|EJR88516.1| shikimate dehydrogenase [Bacillus cereus VD169]
Length = 277
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|423512448|ref|ZP_17488979.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
gi|402449419|gb|EJV81256.1| shikimate dehydrogenase [Bacillus cereus HuA2-1]
Length = 277
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL R +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQERRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|315230187|ref|YP_004070623.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
gi|315183215|gb|ADT83400.1| shikimate 5-dehydrogenase I alpha [Thermococcus barophilus MP]
Length = 272
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 147/279 (52%), Gaps = 19/279 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
INA T+++GLI KPV HS P++HN F+ N N +Y+ VDDL+ + +G
Sbjct: 2 INAKTRLYGLIGKPVEHSLSPVIHNALFKRYNINAVYLAFDVDDLESAVKGVKALGISGL 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
+V PYKE +++F DE+ A+AI +VNT++ R +GKLIGYNTD ++ A++ +
Sbjct: 62 NVTMPYKEQILEFLDELSEEARAIGSVNTVVNR--EGKLIGYNTDGIGALKALKRFTEVE 119
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
G + G + L SR A+VV+ + +AK L +
Sbjct: 120 GKRVLLLGAGGAGKAIAYTL---------------SRLAKVVVLNRTERKAKELEKFGVK 164
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
+ ++ L I+ NAT LGM N DR P+ + LR+ +VFD VY+P +T LL
Sbjct: 165 GGKLSKENLKRYLSWADIVINATSLGM--NEDRSPIPKGLLRENLVVFDIVYSPLETNLL 222
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
++A G + + G+ M + Q F L+TG + EFMR
Sbjct: 223 REAREVGCLTIDGLWMLIHQGAESFRLWTGVKPDVEFMR 261
>gi|423585186|ref|ZP_17561273.1| shikimate dehydrogenase [Bacillus cereus VD045]
gi|401233829|gb|EJR40315.1| shikimate dehydrogenase [Bacillus cereus VD045]
Length = 277
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRMPNIERMKQLVIEKL 275
>gi|423417741|ref|ZP_17394830.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
gi|401106912|gb|EJQ14869.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-1]
Length = 277
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 158/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLAS----DV 411
PL + +L GAGGA RA+ F G + + I + ++A++L + +V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSHALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|220928114|ref|YP_002505023.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
gi|219998442|gb|ACL75043.1| shikimate 5-dehydrogenase [Clostridium cellulolyticum H10]
Length = 294
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 25/290 (8%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
+E +N T+++G++ PV H+K P +HN F+ N IY+P+ VD L++ + +
Sbjct: 4 IEVVNGKTQLYGVLGNPVQHTKSPFIHNTLFKEFEINAIYLPIHVDKGKLEQVMDGFRAI 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
F+GF+V P+K+ ++ DEV + + A+NT+I + DG+ IGYNTD E +
Sbjct: 64 KFSGFNVTVPFKKDIINHLDEVSAEGKLMGAINTVINK--DGRFIGYNTDAEGFV----- 116
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 407
R + +G F + G+ +L GAGG RA+A S G + I + A+S+
Sbjct: 117 ----RDFSDG---FETTFKGKRVMLLGAGGTSRAIAVRLASEGIEHLTIVNRTEANAQSI 169
Query: 408 AS-------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 459
++ D++ P ++IL+ + E I+ N TP GM D P + QL
Sbjct: 170 SNLVNSNFGDIVSTILPEKEILDRELENNHIIVNTTPAGMSTYLDSTPFDLDFNFNGTQL 229
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V+D +Y P+KTR L+ AE G I +G M + Q + F ++TG + +E
Sbjct: 230 VYDVLYVPKKTRFLEQAEKTGCKIRNGFGMLINQGVSAFEIWTGMQVGRE 279
>gi|163942090|ref|YP_001646974.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
gi|226697482|sp|A9VHW1.1|AROE_BACWK RecName: Full=Shikimate dehydrogenase
gi|163864287|gb|ABY45346.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis KBAB4]
Length = 277
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y+ V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423612545|ref|ZP_17588406.1| shikimate dehydrogenase [Bacillus cereus VD107]
gi|401246134|gb|EJR52486.1| shikimate dehydrogenase [Bacillus cereus VD107]
Length = 277
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTVDKAENLIAGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ K
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMRKL 275
>gi|251798006|ref|YP_003012737.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
gi|247545632|gb|ACT02651.1| shikimate 5-dehydrogenase [Paenibacillus sp. JDR-2]
Length = 293
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 154/306 (50%), Gaps = 28/306 (9%)
Query: 221 TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDL 278
TV +L I++ T ++G+I PV HSK PI+ N FR NG Y+ + D L
Sbjct: 2 TVSALDNGITGNRIDSQTVLYGVIGDPVRHSKSPIMMNRAFRETGINGAYMAFHISPDKL 61
Query: 279 KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
+F + + G +V P+K +MK+ DE+ AQAI AVNTI+ +G+L GYNTD
Sbjct: 62 GEFVAGIRAMGIRGVNVTIPHKLDIMKYMDEIDAGAQAIGAVNTIVN--DNGRLTGYNTD 119
Query: 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIF 397
+ ++++ + LAG+ ++ GAGGA R + + A + + + I
Sbjct: 120 GIGYVRSLKEEAEPE------------LAGKRILVIGAGGASRGIVYALAGEQPSGITIA 167
Query: 398 DIDFERAKSLASDVMGAARPFEDI-------LNFQPEKGAILANATPLGMHPNTDRVPVS 450
+ ERA+ LA R DI L ++ I+ N T +GMHPNTD P+
Sbjct: 168 NRSVERAEELAQSF----RSLADIRAIANDGLQAACKEADIVINTTSVGMHPNTDATPID 223
Query: 451 EETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 510
L+ + D +Y P +T+ L DAE G + G+ MF+ Q F +TG++AP
Sbjct: 224 AAWLKPGAVASDLIYNPLRTKFLLDAERHGCRVHGGLGMFIYQGAYAFEYWTGQQAPAAA 283
Query: 511 MREIVL 516
MRE VL
Sbjct: 284 MRETVL 289
>gi|423673876|ref|ZP_17648815.1| shikimate dehydrogenase [Bacillus cereus VDM062]
gi|401310242|gb|EJS15567.1| shikimate dehydrogenase [Bacillus cereus VDM062]
Length = 277
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYYAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|228954621|ref|ZP_04116645.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229192547|ref|ZP_04319508.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|423426468|ref|ZP_17403499.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|423502980|ref|ZP_17479572.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449091298|ref|YP_007423739.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|228590854|gb|EEK48712.1| Shikimate dehydrogenase [Bacillus cereus ATCC 10876]
gi|228805067|gb|EEM51662.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|401111215|gb|EJQ19114.1| shikimate dehydrogenase [Bacillus cereus BAG3X2-2]
gi|402459201|gb|EJV90938.1| shikimate dehydrogenase [Bacillus cereus HD73]
gi|449025055|gb|AGE80218.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 277
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L G+GGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|229081598|ref|ZP_04214094.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
gi|228701704|gb|EEL54194.1| Shikimate dehydrogenase [Bacillus cereus Rock4-2]
Length = 277
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 30/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-----ERAKSL---- 407
PL G+ +L G+GGA RA+ F G + DID +AK L
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVK----DIDVANRTVNKAKELIAAR 164
Query: 408 ASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
+DV A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P
Sbjct: 165 TADVNSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T++L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 224 FQTKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|229071841|ref|ZP_04205054.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|423437780|ref|ZP_17414761.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
gi|228711271|gb|EEL63233.1| Shikimate dehydrogenase [Bacillus cereus F65185]
gi|401120935|gb|EJQ28731.1| shikimate dehydrogenase [Bacillus cereus BAG4X12-1]
Length = 277
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L G+GGA RA+ F G + + + + +AK L +DV
Sbjct: 117 --------PLQGKRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIEKL 275
>gi|229013555|ref|ZP_04170688.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|229062033|ref|ZP_04199358.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|229169082|ref|ZP_04296797.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|423519034|ref|ZP_17495515.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|423591670|ref|ZP_17567701.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|423598349|ref|ZP_17574349.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|423660821|ref|ZP_17635990.1| shikimate dehydrogenase [Bacillus cereus VDM022]
gi|423669920|ref|ZP_17644949.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|228614310|gb|EEK71420.1| Shikimate dehydrogenase [Bacillus cereus AH621]
gi|228717185|gb|EEL68860.1| Shikimate dehydrogenase [Bacillus cereus AH603]
gi|228747715|gb|EEL97585.1| Shikimate dehydrogenase [Bacillus mycoides DSM 2048]
gi|401160089|gb|EJQ67468.1| shikimate dehydrogenase [Bacillus cereus HuA2-4]
gi|401231803|gb|EJR38305.1| shikimate dehydrogenase [Bacillus cereus VD048]
gi|401236619|gb|EJR43076.1| shikimate dehydrogenase [Bacillus cereus VD078]
gi|401299047|gb|EJS04647.1| shikimate dehydrogenase [Bacillus cereus VDM034]
gi|401300862|gb|EJS06451.1| shikimate dehydrogenase [Bacillus cereus VDM022]
Length = 277
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|320352426|ref|YP_004193765.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
gi|320120928|gb|ADW16474.1| shikimate dehydrogenase [Desulfobulbus propionicus DSM 2032]
Length = 278
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 151/289 (52%), Gaps = 20/289 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
IN T++FG+I PV HS P +HN F H+ NG+Y+PM DL F S F G
Sbjct: 2 INGQTQLFGIIGNPVEHSLSPAMHNAAFAHLGLNGVYIPMRPADLGDGFRGLKSLGFVGV 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDG--KLIGYNTDCEASITAIEDAI 350
SV P+K AVM + DEV P+A+ I AVNT++ RR DG + +GYNTD S A+ +A+
Sbjct: 62 SVTVPFKVAVMDYIDEVDPVARKIGAVNTLLFRRDQDGQNRCLGYNTDWLGSNQALAEAL 121
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 410
LA ++ GAGGA RA+ FG GARV++ + + + LA
Sbjct: 122 D--------------LATSTVLIIGAGGAARAVGFGLIEAGARVLVTNRTESKGRDLARQ 167
Query: 411 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ PF + L N T +GM P + VP+ L + +V D VY P T
Sbjct: 168 LNC---PFLSAHELPTAQADALINTTSVGMAPKKEAVPIDPALLARFPVVMDIVYAPLST 224
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
RLL +A+ G + G++M Q QF L+TG+EAP MR+ +L +
Sbjct: 225 RLLVEAKQRGCRTIDGLKMLQYQGAAQFILWTGREAPHAVMRQALLEEL 273
>gi|423489518|ref|ZP_17466200.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
gi|423495241|ref|ZP_17471885.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|423497965|ref|ZP_17474582.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|401151334|gb|EJQ58786.1| shikimate dehydrogenase [Bacillus cereus CER057]
gi|401161252|gb|EJQ68619.1| shikimate dehydrogenase [Bacillus cereus CER074]
gi|402431754|gb|EJV63818.1| shikimate dehydrogenase [Bacillus cereus BtB2-4]
Length = 278
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 156/288 (54%), Gaps = 21/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSV 295
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEEALGEAVKGLKALGISGFNV 62
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TTPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE--- 116
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGA 414
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 117 --------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMAN 168
Query: 415 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 VNSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETK 228
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 276
>gi|423463981|ref|ZP_17440749.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
gi|402420248|gb|EJV52519.1| shikimate dehydrogenase [Bacillus cereus BAG6O-1]
Length = 276
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 297
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKTLGISGFNVTT 62
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVM 412
PL + +L GAGGA RA+ F G + + + + ++AK L A+DV
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
A E Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++
Sbjct: 169 SVALSLEKATEEQGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKI 227
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|229117832|ref|ZP_04247196.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|423377808|ref|ZP_17355092.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
gi|423547637|ref|ZP_17523995.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|423622578|ref|ZP_17598356.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|228665629|gb|EEL21107.1| Shikimate dehydrogenase [Bacillus cereus Rock1-3]
gi|401179358|gb|EJQ86531.1| shikimate dehydrogenase [Bacillus cereus HuB5-5]
gi|401260698|gb|EJR66866.1| shikimate dehydrogenase [Bacillus cereus VD148]
gi|401636074|gb|EJS53828.1| shikimate dehydrogenase [Bacillus cereus BAG1O-2]
Length = 276
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 297
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVM 412
PL + +L GAGGA RA+ F G + + + + ++AK L A+DV
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
A E Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++
Sbjct: 169 SVALSLEKATEEQGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEATIVSDIIYNPFETKI 227
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|423527807|ref|ZP_17504252.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
gi|402451470|gb|EJV83289.1| shikimate dehydrogenase [Bacillus cereus HuB1-1]
Length = 277
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|423395366|ref|ZP_17372567.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
gi|401654777|gb|EJS72316.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-1]
Length = 277
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 28/291 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H++ + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQAVSSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 415
PL G+ +L GAGGA RA+ F A V + +ID R A +++ A
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSL----ADVGVEEIDVANRTVDKAKELIAAC 164
Query: 416 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
++ + EK I+ T +GMHP+ + P+ +L+ +V D +Y P
Sbjct: 165 TANDNSVALSLEKATEEQGNYDIIIQTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPF 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+TR+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETRILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIKKL 275
>gi|206976069|ref|ZP_03236979.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217961824|ref|YP_002340394.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|222097779|ref|YP_002531836.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|229141072|ref|ZP_04269614.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|375286341|ref|YP_005106780.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|423354827|ref|ZP_17332452.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|423373787|ref|ZP_17351126.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|423570574|ref|ZP_17546819.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
gi|226726289|sp|B7HPN3.1|AROE_BACC7 RecName: Full=Shikimate dehydrogenase
gi|254806732|sp|B9IYA1.1|AROE_BACCQ RecName: Full=Shikimate dehydrogenase
gi|206745821|gb|EDZ57218.1| shikimate 5-dehydrogenase [Bacillus cereus H3081.97]
gi|217067575|gb|ACJ81825.1| shikimate 5-dehydrogenase [Bacillus cereus AH187]
gi|221241837|gb|ACM14547.1| shikimate 5-dehydrogenase [Bacillus cereus Q1]
gi|228642350|gb|EEK98639.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|358354868|dbj|BAL20040.1| shikimate 5-dehydrogenase [Bacillus cereus NC7401]
gi|401085831|gb|EJP94065.1| shikimate dehydrogenase [Bacillus cereus IS075]
gi|401095188|gb|EJQ03248.1| shikimate dehydrogenase [Bacillus cereus AND1407]
gi|401203770|gb|EJR10605.1| shikimate dehydrogenase [Bacillus cereus MSX-A12]
Length = 277
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 154/288 (53%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E+ Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEEATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|229135160|ref|ZP_04263960.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
gi|228648288|gb|EEL04323.1| Shikimate dehydrogenase [Bacillus cereus BDRD-ST196]
Length = 277
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|229076009|ref|ZP_04208982.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|229098806|ref|ZP_04229744.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|229104966|ref|ZP_04235622.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|407706862|ref|YP_006830447.1| stage IV sporulation protein FB [Bacillus thuringiensis MC28]
gi|423440916|ref|ZP_17417822.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|423448916|ref|ZP_17425795.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|423533344|ref|ZP_17509762.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
gi|423541401|ref|ZP_17517792.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|423615324|ref|ZP_17591158.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|228678460|gb|EEL32681.1| Shikimate dehydrogenase [Bacillus cereus Rock3-28]
gi|228684650|gb|EEL38590.1| Shikimate dehydrogenase [Bacillus cereus Rock3-29]
gi|228707121|gb|EEL59321.1| Shikimate dehydrogenase [Bacillus cereus Rock4-18]
gi|401129510|gb|EJQ37193.1| shikimate dehydrogenase [Bacillus cereus BAG5O-1]
gi|401172589|gb|EJQ79810.1| shikimate dehydrogenase [Bacillus cereus HuB4-10]
gi|401261003|gb|EJR67170.1| shikimate dehydrogenase [Bacillus cereus VD115]
gi|402417577|gb|EJV49877.1| shikimate dehydrogenase [Bacillus cereus BAG4X2-1]
gi|402463563|gb|EJV95263.1| shikimate dehydrogenase [Bacillus cereus HuB2-9]
Length = 276
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 21/287 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGF 297
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTT 62
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 PHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE----- 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVM 412
PL + +L GAGGA RA+ F G + + + + ++AK L A+DV
Sbjct: 116 -------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVH 168
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
A E Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++
Sbjct: 169 SVALSLEKATEEQGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKI 227
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVMRKL 274
>gi|229157949|ref|ZP_04286021.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
gi|228625509|gb|EEK82264.1| Shikimate dehydrogenase [Bacillus cereus ATCC 4342]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G R + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q E I+ T +GMHP P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQ-ENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|228941501|ref|ZP_04104051.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974431|ref|ZP_04134999.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981026|ref|ZP_04141328.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|384188408|ref|YP_005574304.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676723|ref|YP_006929094.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452200800|ref|YP_007480881.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778686|gb|EEM26951.1| Shikimate dehydrogenase [Bacillus thuringiensis Bt407]
gi|228785267|gb|EEM33278.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818151|gb|EEM64226.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942117|gb|AEA18013.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175852|gb|AFV20157.1| shikimate dehydrogenase AroE [Bacillus thuringiensis Bt407]
gi|452106193|gb|AGG03133.1| Shikimate 5-dehydrogenase I alpha [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|384182154|ref|YP_005567916.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328238|gb|ADY23498.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + + + ++AK L + M
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E+ I+ T +GMHP + P+ +L+ +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|228987587|ref|ZP_04147703.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772128|gb|EEM20578.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 277
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIAPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G R + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q E I+ T +GMHP P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQ-ENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|330836654|ref|YP_004411295.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
gi|329748557|gb|AEC01913.1| 3-dehydroquinate dehydratase [Sphaerochaeta coccoides DSM 17374]
Length = 485
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 237/501 (47%), Gaps = 28/501 (5%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVY 71
M+C L +++ + +S Y+ + VE+RLD + + + + + P+P+++
Sbjct: 1 MLCLTLTGRTLLENISQ-YERNKDWVGAVELRLDYLEESE-ARLAGSLPEQFPVPMILTC 58
Query: 72 RPKWAGGLYEGDEHKRLEALHLAEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSC 130
R + GGL E KRL + D GA YVD E + + + + G R I S
Sbjct: 59 RRESDGGLCTSTERKRLSLMKEVLDRGAFAYVDLEDDLKKT--EAEQLARRKGIRIIRSH 116
Query: 131 NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC--QVPIIAYSV 188
+ P+ D+ ++R+ A G DI KL + + + ++ R+F++ I +
Sbjct: 117 HDFSGMPA--DIYARMARILAKG-DIPKLAVTPHTVEDVIRLFRIKDEIPGSTEKIVIGM 173
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLISK 246
G G+ +++L K ++++ + + G+ + L + Y + ++A+T++FG+I
Sbjct: 174 GVLGIPTRILYRKIGSSMMFCCDEAAESVAPGMLSARVLSEVYGADKVDAETEIFGIIGN 233
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
PV S P++HNP FR + N IY VD ++ FF D GFSV P+K V+ +
Sbjct: 234 PVSQSASPLIHNPGFRAIKKNAIYSLFPVDAVRPFFRLADVLDIRGFSVTVPFKRDVIPY 293
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
+ + I + NT++R K G NTD ++ + AI +G
Sbjct: 294 LGTISREVKQIGSCNTVVRVKDLWK--GINTDYHGFLSQLMPAI-----TSGRV------ 340
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
R ++ GAGGA RA+A+ + ++ I + E A+ LA++ M E+I +
Sbjct: 341 --RTALILGAGGAARAVAWALHNHSVKITILNRSAEAARKLAAETMAGWDVLENISEYSG 398
Query: 427 EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
K ++ T +GM P++D P + ++ +D VY P +TR L A AG ++ G
Sbjct: 399 -KSDMIVQTTSVGMTPDSDEDPSAGYVFSGKEIAYDLVYKPHQTRFLLRAAEAGCEVIYG 457
Query: 487 VEMFLRQAIGQFNLFTGKEAP 507
+M L Q QF FTG P
Sbjct: 458 AQMLLEQGKLQFEAFTGYHYP 478
>gi|423368385|ref|ZP_17345817.1| shikimate dehydrogenase [Bacillus cereus VD142]
gi|401080712|gb|EJP88996.1| shikimate dehydrogenase [Bacillus cereus VD142]
Length = 277
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 155/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M++ DE+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVTIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++AK+L S M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|229198462|ref|ZP_04325166.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|423573986|ref|ZP_17550105.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|423604016|ref|ZP_17579909.1| shikimate dehydrogenase [Bacillus cereus VD102]
gi|228584965|gb|EEK43079.1| Shikimate dehydrogenase [Bacillus cereus m1293]
gi|401212555|gb|EJR19298.1| shikimate dehydrogenase [Bacillus cereus MSX-D12]
gi|401245702|gb|EJR52055.1| shikimate dehydrogenase [Bacillus cereus VD102]
Length = 277
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 153/288 (53%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAYYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E+ Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEEATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|423406241|ref|ZP_17383390.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
gi|401660235|gb|EJS77717.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-3]
Length = 277
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H++ + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLDMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQAVSSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + ++AK L ++V
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVEEIDVANRTVDKAKELIAACTANV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +TR
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLHISSLKKGTIVSDIIYNPFETR 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIKKL 275
>gi|229163283|ref|ZP_04291237.1| Shikimate dehydrogenase [Bacillus cereus R309803]
gi|228620190|gb|EEK77062.1| Shikimate dehydrogenase [Bacillus cereus R309803]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 154/291 (52%), Gaps = 28/291 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLAMQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 415
PL G+ +L GAGGA RA+ F G + +ID R A +++ A
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADIGVK----EIDVANRTVDKAEELIAAC 164
Query: 416 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
+ + EK I+ T +GMHP + P+ +L+ +V D +Y P
Sbjct: 165 KAHVTSVALSLEKATEEQENYDIIIQTTTIGMHPYVEHTPLQICSLKKGTIVSDIIYNPF 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T++L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRIPNIDRMKQLVIKKL 275
>gi|423385836|ref|ZP_17363092.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
gi|401635892|gb|EJS53647.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-2]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQMCLLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIEKL 275
>gi|47569330|ref|ZP_00240014.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
gi|47554001|gb|EAL12368.1| shikimate 5-dehydrogenase [Bacillus cereus G9241]
Length = 277
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMNYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G R + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q E I+ T +GMHP P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATEEQ-ENYDIIIQTTTIGMHPRVQYTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|228902860|ref|ZP_04067003.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|434377502|ref|YP_006612146.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
gi|228856784|gb|EEN01301.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|401876059|gb|AFQ28226.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-789]
Length = 277
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N N Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|229019559|ref|ZP_04176375.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
gi|229025800|ref|ZP_04182199.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228735508|gb|EEL86104.1| Shikimate dehydrogenase [Bacillus cereus AH1272]
gi|228741725|gb|EEL91909.1| Shikimate dehydrogenase [Bacillus cereus AH1273]
Length = 277
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAEQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLAS----DV 411
PL + +L GAGGA RA+ F G + + I + ++A++L + +V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSHALSLEHAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L A+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 228 ILGGAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423483917|ref|ZP_17460607.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
gi|401141468|gb|EJQ49023.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-2]
Length = 277
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 156/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVDPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLVDVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ + P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQVVMREL 275
>gi|229086905|ref|ZP_04219064.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
gi|228696415|gb|EEL49241.1| Shikimate dehydrogenase [Bacillus cereus Rock3-44]
Length = 277
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 157/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F + + + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFENCSIDAHYHAFLVEEMALGEAVKGLKALGVSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++MK+ DE+ PLA+ I AVNT+++R D KLIGYNTD + +++ K+
Sbjct: 63 TPHKVSIMKYLDEIDPLAKQIGAVNTVVQR--DEKLIGYNTDGIGYVRSLQSISKD---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + E+A L + G
Sbjct: 117 --------PLDQKRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANQLIAGCQGKI 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L EK I+ + T +GM+P+ P+ ++L+ +V D +Y P +T+L
Sbjct: 169 TSHALSLEQATEKQKNYDIIIHTTTIGMYPHVQSTPLQIQSLKQGTIVSDIIYNPFETKL 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L+DA+A GAI+ +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LQDAKAQGAIVQNGIDMFVYQGALAFEMWTGRIPNIERMKQLVMRKL 275
>gi|423389348|ref|ZP_17366574.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
gi|401641439|gb|EJS59156.1| shikimate dehydrogenase [Bacillus cereus BAG1X1-3]
Length = 277
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEAALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ KE
Sbjct: 63 TPHKVAIMEYLDEVAPLAKQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQSISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLAS----DV 411
PL + +L GAGGA RA+ F G + + I + ++A++L + +V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKAIDIANRTRDKAENLVAGCLANV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q E I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSHALSLEQAAKAQGEYDIII-QTTTIGMHPHVEHTPLEIRSLKKGAIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L DA+ GAII +G++MF+ Q F ++T + M+++V+ +
Sbjct: 228 ILGDAKEQGAIIQNGIDMFVYQGALAFEMWTECVPNIDRMKQLVMREL 275
>gi|337289037|ref|YP_004628509.1| Shikimate dehydrogenase [Thermodesulfobacterium sp. OPB45]
gi|334902775|gb|AEH23581.1| Shikimate dehydrogenase [Thermodesulfobacterium geofontis OPF15]
Length = 274
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 146/278 (52%), Gaps = 24/278 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+V+G+I PV HS PI+HN FR N +Y V D L K + + G SV
Sbjct: 3 EVYGIIGDPVSHSLSPIMHNLAFREKNIRAVYGAFRVSADQLAKAVEGIKALNIKGLSVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++++ DE+ +A I AVNT++ + +G L GYNTD I A E
Sbjct: 63 IPHKEKIIEYLDEIDEIAYEIGAVNTVLNK--EGILKGYNTDWIGVIKAFE--------- 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 415
G L + V+ GAGGA +A+ + KS+ ++ +++ FE+AK L A
Sbjct: 112 ----VNGVELRDKKIVVIGAGGASKAVIYALIKSKAKKIHVYNRTFEKAKILEEKFKIIA 167
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+P+E++ N + G I+ T +G+ + PV EE + +++ D VY P KT+ L
Sbjct: 168 KPWEELKNAE---GDIIIQTTSVGL--KSWETPVEEEIISRFKVAMDIVYLPLKTKFLSI 222
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
AE G II G++M L Q + QF L+TG E P E M++
Sbjct: 223 AERYGKII-DGLQMLLYQGVEQFKLWTGIEPPVELMKK 259
>gi|228910172|ref|ZP_04073991.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|423358629|ref|ZP_17336132.1| shikimate dehydrogenase [Bacillus cereus VD022]
gi|228849455|gb|EEM94290.1| Shikimate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|401084501|gb|EJP92747.1| shikimate dehydrogenase [Bacillus cereus VD022]
Length = 277
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRVPNIGRMKQLVIEKL 275
>gi|423558082|ref|ZP_17534384.1| shikimate dehydrogenase [Bacillus cereus MC67]
gi|401191350|gb|EJQ98372.1| shikimate dehydrogenase [Bacillus cereus MC67]
Length = 277
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 155/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAVMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|423561197|ref|ZP_17537473.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
gi|401201454|gb|EJR08319.1| shikimate dehydrogenase [Bacillus cereus MSX-A1]
Length = 277
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + V + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEVDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|423452362|ref|ZP_17429215.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|423470556|ref|ZP_17447300.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
gi|423521807|ref|ZP_17498280.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|401140000|gb|EJQ47557.1| shikimate dehydrogenase [Bacillus cereus BAG5X1-1]
gi|401176469|gb|EJQ83664.1| shikimate dehydrogenase [Bacillus cereus HuA4-10]
gi|402436222|gb|EJV68254.1| shikimate dehydrogenase [Bacillus cereus BAG6O-2]
Length = 277
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 155/287 (54%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DEV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E
Sbjct: 63 TPHKVAIMEYLDEVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE---- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + I + ++A++L + M
Sbjct: 116 -------DPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E I+ T +GMHP+ P+ +L+ +V D +Y P +T++
Sbjct: 169 NSHALSLECAAENQGEYDIIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ GAII +G++MF+ Q F ++TG + M+++V+ +
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVMREL 275
>gi|389581076|ref|ZP_10171103.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
gi|389402711|gb|EIM64933.1| shikimate 5-dehydrogenase [Desulfobacter postgatei 2ac9]
Length = 266
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 153/283 (54%), Gaps = 20/283 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+A T+++ L P HSKGP++HN F+ + N +Y+ V D + D G
Sbjct: 2 IDAATRLYCLFGNPARHSKGPVIHNAAFKDKDINAVYLAFEVQDAAGAAQAVRTLDIKGA 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE++M+ D + P A+AI AVNTI+ +G L GYNTDC+A++ +
Sbjct: 62 SVTIPFKESIMEHIDWIDPTARAIGAVNTIVNE--NGVLKGYNTDCQAAVAPL------- 112
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
FG ++G+ + GAGGA RA+A G +++ ++I + ++ ++LA V
Sbjct: 113 ------VPFG--ISGKTVCIVGAGGAARAVAHGIEAQNGDIIITNRTEQKGRALAETVNA 164
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
P E++ N Q + ++ N T +GM P + + E LR +V D VYTP +TRLL
Sbjct: 165 RFIPAEEMENIQAD---VIINTTSIGMTPKENEISFPPEALRSEMVVMDVVYTPLRTRLL 221
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ AE G + G+ MF+ QA QF L+TG + MR ++
Sbjct: 222 EAAEQKGCTTIDGLSMFIAQAAAQFELWTGIIPDTDLMRNTII 264
>gi|218899502|ref|YP_002447913.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228967401|ref|ZP_04128434.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402564189|ref|YP_006606913.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
gi|226724115|sp|B7IYI7.1|AROE_BACC2 RecName: Full=Shikimate dehydrogenase
gi|218543181|gb|ACK95575.1| shikimate 5-dehydrogenase [Bacillus cereus G9842]
gi|228792289|gb|EEM39858.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401792841|gb|AFQ18880.1| shikimate 5-dehydrogenase [Bacillus thuringiensis HD-771]
Length = 277
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 155/288 (53%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T+
Sbjct: 169 NSVALSLEKATEEQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGSVPNIGRMKQLVIEKL 275
>gi|228916966|ref|ZP_04080527.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228842687|gb|EEM87774.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L++ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|374295740|ref|YP_005045931.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
gi|359825234|gb|AEV68007.1| shikimate dehydrogenase [Clostridium clariflavum DSM 19732]
Length = 293
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 150/291 (51%), Gaps = 24/291 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
+ TK+ GLI PV HS P LHN + + + IYVP+ VD DL+ + +F
Sbjct: 7 VTGKTKLLGLIGNPVEHSISPQLHNSLSKILGLDLIYVPLRVDKEDLETLVKALKATEFV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V PYK +MKF D A + +VNT+ + DG+L GYNTD E + A ++A
Sbjct: 67 GFNVTVPYKREIMKFLDGNTKEAILMGSVNTV--KKIDGRLYGYNTDGEGFLRAFKEAA- 123
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ G+ V+ GAGGA R +A GA ++ + + +++ LA
Sbjct: 124 -----------GTDFKGKKVVMLGAGGAARPIAVKIALEGAEKISLVNRTTQKSVELAEV 172
Query: 411 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
V + NF+ E+ I+ N T +GM P+ D +S+ + + Q+V+D
Sbjct: 173 VNENIAEIVQVYNFEDKTLKLAFEESDIIINTTSVGMSPDIDNSLISDTSYFNGQIVYDI 232
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+Y P KT+ L DAE+ G I++G+ M Q I + ++TG + +E +R++
Sbjct: 233 IYNPVKTKFLADAESRGCKIINGLGMLFYQGINAYEIWTGVKISEEILRDL 283
>gi|390956953|ref|YP_006420710.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
gi|390411871|gb|AFL87375.1| 3-dehydroquinate dehydratase [Terriglobus roseus DSM 18391]
Length = 512
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 234/508 (46%), Gaps = 42/508 (8%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL----EIILTKKPLPVLIVYR 72
++A + E V +N + VE RLD + + P L + + + + + R
Sbjct: 32 MIALAAETVRTNPF---------VEFRLDSLAD--PAAMLPALRQFLFGNRDVTAVATCR 80
Query: 73 PKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQ-SGTRFIVSCN 131
K GG + GD ++ L A G VD E++ A + + +G I+S +
Sbjct: 81 RKAFGGDFGGDARAQIAILREAALAGCRLVDIEVETAEELGQAALEELRGAGAAVILSWH 140
Query: 132 LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSH--CQVPIIAYSVG 189
TP +L ++ RM+ D+ K+V + + + R+ +L + ++A S+G
Sbjct: 141 DFQATP---ELEPVLERMRPFAPDVYKIVPTAKTLRDALRLIDVLEKHGGEGNLVAMSMG 197
Query: 190 ERGLVSQLLSPKFNGALVYGSL--KGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKP 247
+G ++++L P+F + S G G +V LR+ Y+V+ I++ T ++ + +P
Sbjct: 198 FKGTLTRVLGPRFGSLFTFASADGHGGTAPGQVSVSVLRELYRVDEISSQTAIYAVAGEP 257
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S P + N F + +Y+P+ D K+ + G S+ P KE VM
Sbjct: 258 ITGSMSPRMQNTAFADAGMDAVYLPLETSDPKELLEVAERLNIRGLSITMPLKELVMPLL 317
Query: 308 DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLA 367
+ A NT++R DGKL G+NTD + + I +G
Sbjct: 318 AFRDRSVEQAGACNTLLRH-RDGKLAGFNTDIAGIVEPLARRITLKG------------- 363
Query: 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
R+ VL G A A+ +G RGA V + + ERA+ LA++ + E + +
Sbjct: 364 ARVLVLGAGGAARAAV-YGLVERGATVFLLNRTTERAEMLAAESGARVQARETLAETYFD 422
Query: 428 KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 487
AIL N+TP GM T P+++ + + ++ FD VY P +T L+ A A GA I+ GV
Sbjct: 423 --AIL-NSTPYGMRGQTMDAPITQAEM-NCRVFFDLVYNPLETPLIVAARARGAEIIPGV 478
Query: 488 EMFLRQAIGQFNLFTGKEAPKEFMREIV 515
MF+ Q QF+L+T + AP+ M +V
Sbjct: 479 AMFVEQGARQFSLWTERAAPEGEMLRVV 506
>gi|49481393|ref|YP_038388.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196039231|ref|ZP_03106537.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
gi|81696659|sp|Q6HDI8.1|AROE_BACHK RecName: Full=Shikimate dehydrogenase
gi|49332949|gb|AAT63595.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196029858|gb|EDX68459.1| shikimate dehydrogenase [Bacillus cereus NVH0597-99]
Length = 277
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|300118673|ref|ZP_07056401.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
gi|298723922|gb|EFI64636.1| shikimate 5-dehydrogenase [Bacillus cereus SJ1]
Length = 277
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGDPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L++ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|228923087|ref|ZP_04086379.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423634842|ref|ZP_17610495.1| shikimate dehydrogenase [Bacillus cereus VD156]
gi|228836585|gb|EEM81934.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401278828|gb|EJR84758.1| shikimate dehydrogenase [Bacillus cereus VD156]
Length = 277
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 151/287 (52%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V ++L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E+ I+ T +GMHP + P+ +L+ +V D +Y P +T++
Sbjct: 169 HSVPLSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRAPNIERMKQLVIRKL 275
>gi|158523119|ref|YP_001530989.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
gi|158511945|gb|ABW68912.1| shikimate 5-dehydrogenase [Desulfococcus oleovorans Hxd3]
Length = 286
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 153/293 (52%), Gaps = 25/293 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAG 292
++ T++ +I PV HS P +HN F N N +YV V+D+ + + +F G
Sbjct: 4 VDTATRLCAVIGNPVEHSLSPAIHNAAFAARNLNFVYVAFRVNDVGPALAGMRALENFRG 63
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
S+ P+K + + DE+ L +A+ A+NT++ G+L G NTD ++ A+++A
Sbjct: 64 MSITIPHKISAIGHVDEITDLDRAMGAINTVVNE--KGRLTGSNTDGPGALKALKNA--- 118
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASD 410
G +G+ ++ GAGG RA+AF + A +V+ DID + L+SD
Sbjct: 119 ----------GVETSGKTVLMLGAGGVARAIAFTLAWQADIAELVLLDIDSALREQLSSD 168
Query: 411 VMGA------ARPFED-ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
+ A FE+ L + I+ + TP+GMHP TD V + R VFD
Sbjct: 169 LKNGTSATITAAGFENKALAHAMARADIVIHCTPVGMHPKTDASLVPPDLFRPGMAVFDV 228
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VY P +T+LL +A A G VSGVE+F+ QA+ QF FTG+ P + MR +V+
Sbjct: 229 VYNPLETKLLTEAAAFGLKTVSGVELFVNQAVLQFEKFTGETGPADVMRRVVM 281
>gi|402555531|ref|YP_006596802.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
gi|401796741|gb|AFQ10600.1| shikimate 5-dehydrogenase [Bacillus cereus FRI-35]
Length = 277
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 150/287 (52%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E+ I+ T +GMHP + P+ +L +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|423582542|ref|ZP_17558653.1| shikimate dehydrogenase [Bacillus cereus VD014]
gi|401213421|gb|EJR20162.1| shikimate dehydrogenase [Bacillus cereus VD014]
Length = 277
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V ++L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEELGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--GGKLIGYNTDGIGFVRALQSVSSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
E Q E I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVPLSLEKATEEQ-ENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGRAPNIERMKQLVIRKL 275
>gi|229093404|ref|ZP_04224509.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
gi|228689998|gb|EEL43801.1| Shikimate dehydrogenase [Bacillus cereus Rock3-42]
Length = 277
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMGAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L++ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|218905471|ref|YP_002453305.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228929379|ref|ZP_04092402.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229123873|ref|ZP_04253066.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|226724114|sp|B7JNW6.1|AROE_BACC0 RecName: Full=Shikimate dehydrogenase
gi|218536842|gb|ACK89240.1| shikimate 5-dehydrogenase [Bacillus cereus AH820]
gi|228659587|gb|EEL15234.1| Shikimate dehydrogenase [Bacillus cereus 95/8201]
gi|228830285|gb|EEM75899.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|350271939|ref|YP_004883247.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
gi|348596781|dbj|BAL00742.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
Length = 286
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 150/296 (50%), Gaps = 25/296 (8%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSS 287
+ +I DTK+ GL+ P+ S L N + + Y+P+ V D L +
Sbjct: 1 MHYITVDTKMIGLLGTPLRQSVSYKLQNRVYEQAGLDYFYLPIEVSTEDRLPAVVEGIRA 60
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+FAGF++ PYKE ++K+ DE L + A NT+ R DGKLIGYNTD + ++E
Sbjct: 61 MNFAGFAITKPYKETILKYLDERDDLVTKMGACNTVAVR--DGKLIGYNTDGIGCVRSLE 118
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 407
G + G+ F GAGGA RA+ F RGA+ ++ +R + L
Sbjct: 119 ------------VDGGLDIKGKTFFSFGAGGAARAVCFELACRGAKQIVISSASQRCEHL 166
Query: 408 ASDVM----GAARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
A D+ G P E+ + + +L N + +GM P+ P+ ++ + +QL
Sbjct: 167 AEDINRLFPGLCVPVRLTDEERMYEYIRQADVLLNMSGIGMAPHLGESPMKKDRFQPHQL 226
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+DAVY P KTR L+DAEAA I++G+ M + Q + Q ++TG +AP + M + V
Sbjct: 227 CYDAVYDPEKTRFLQDAEAARCRILNGLGMVIYQGLEQIKIWTGVDAPAQIMFDAV 282
>gi|62319331|dbj|BAD94599.1| putative dehydroquinase shikimate dehydrogenase [Arabidopsis
thaliana]
Length = 139
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 97/136 (71%)
Query: 380 GRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLG 439
G+ALA+GAK +GA+VVI + +ERA LA + G A D+ N+ PE G +LAN T +G
Sbjct: 1 GKALAYGAKEKGAKVVIANRTYERALKLAEAIGGKALSLTDLDNYHPEDGMVLANTTSMG 60
Query: 440 MHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFN 499
M PN + P+S++ L+ Y LVFDAVYTPR TRLL++AE +GAI VSG EMF+RQA QF
Sbjct: 61 MQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFE 120
Query: 500 LFTGKEAPKEFMREIV 515
+FTG APKE +I+
Sbjct: 121 IFTGLPAPKELYWQIM 136
>gi|301055826|ref|YP_003794037.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|423549924|ref|ZP_17526251.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
gi|300377995|gb|ADK06899.1| shikimate 5-dehydrogenase [Bacillus cereus biovar anthracis str.
CI]
gi|401189540|gb|EJQ96590.1| shikimate dehydrogenase [Bacillus cereus ISP3191]
Length = 277
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLREKRILLLGAGGASRAIYFSLVDAGVKEIAVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|52141171|ref|YP_085659.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
gi|81686158|sp|Q634K8.1|AROE_BACCZ RecName: Full=Shikimate dehydrogenase
gi|51974640|gb|AAU16190.1| shikimate 5-dehydrogenase [Bacillus cereus E33L]
Length = 277
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISNE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|115488882|ref|NP_001066928.1| Os12g0534000 [Oryza sativa Japonica Group]
gi|113649435|dbj|BAF29947.1| Os12g0534000, partial [Oryza sativa Japonica Group]
Length = 148
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 100/140 (71%)
Query: 380 GRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLG 439
G+ALA+GAK +GARVVI + F RA+ L + + A ++ N+ PE+ ILAN T +G
Sbjct: 8 GKALAYGAKEKGARVVIANRTFARAQELGNLLGAPALTLAELENYHPEEEMILANTTAIG 67
Query: 440 MHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFN 499
MHPN + P+S++ L+ Y +VFDAVYTP++TRLL++A GA +VSG+EMF+RQA+GQF
Sbjct: 68 MHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLREAAECGATVVSGLEMFIRQAMGQFE 127
Query: 500 LFTGKEAPKEFMREIVLAKF 519
FTG AP MR+IVL K
Sbjct: 128 HFTGMPAPDSLMRDIVLTKI 147
>gi|298675580|ref|YP_003727330.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
gi|298288568|gb|ADI74534.1| shikimate 5-dehydrogenase [Methanohalobium evestigatum Z-7303]
Length = 275
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 151/286 (52%), Gaps = 22/286 (7%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 297
VFG+ PV HS P +HN F + + IY VD L+ + ++ F G ++
Sbjct: 4 VFGVFGDPVEHSLSPDMHNAAFSELGMDSIYHAFRVDKKSLEYALNGANAMGFGGVNITV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P K+ +KF + PLA I AVNTI R ++ +IGYNTD + AI DA
Sbjct: 64 PLKQEALKFVN-TDPLASKIGAVNTIDFR-NENDMIGYNTDGVGARRAIADA-------- 113
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV--MGAA 415
G + + ++ GAGGA RA+ F + GA ++I + +A LA DV +G A
Sbjct: 114 -----GVDVKNKNILILGAGGASRAICFQFANDGADLIIANRTESKALELAEDVKSVGNA 168
Query: 416 RP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
R F ++ E IL N T +GMHPNT ++ E + +VFD VY P +TRLL
Sbjct: 169 RGIGFSNLEELIAESD-ILINTTTVGMHPNTKDTIITSEHMHSGLVVFDIVYNPLETRLL 227
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
K+A++AGAI V+G+ MF+ Q F ++TG+ P E M+ VL +
Sbjct: 228 KEAKSAGAIPVNGLMMFVYQGAEAFKIWTGENPPIEVMKNTVLEEL 273
>gi|228935655|ref|ZP_04098469.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824015|gb|EEM69833.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|73668461|ref|YP_304476.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
gi|121718714|sp|Q46DZ6.1|AROE_METBF RecName: Full=Shikimate dehydrogenase
gi|72395623|gb|AAZ69896.1| shikimate dehydrogenase [Methanosarcina barkeri str. Fusaro]
Length = 280
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+VFG+ P+ HS P +HN F + + IY V + L+K + F G ++
Sbjct: 3 QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62
Query: 297 FPYKEAVMKF-CDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P KE +K C + PLA+ I AVNTI+ + G++ GYNTD + A++++ E
Sbjct: 63 VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNSAVE--- 118
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G V+ GAGGA R++AF + GA + I + RA LA D+ A+
Sbjct: 119 ----------MEGSKIVVTGAGGAARSIAFQLAADGAEITIVNRTEGRAIELAKDISAAS 168
Query: 416 -------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
+ + N + IL N T LGMHPN D + E L VFD VY P
Sbjct: 169 LSGNVTGKGLSGLKNLL-QDANILINTTTLGMHPNVDTAIATAEDLHPDLTVFDIVYNPL 227
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+TRLL++A+A+GA VSGV M + Q F L+TG E P E M++ VL
Sbjct: 228 ETRLLREAKASGAKTVSGVLMLVYQGAEAFKLWTGIEPPVELMKKTVL 275
>gi|337287267|ref|YP_004626740.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
gi|335360095|gb|AEH45776.1| shikimate 5-dehydrogenase [Thermodesulfatator indicus DSM 15286]
Length = 273
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 149/275 (54%), Gaps = 23/275 (8%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
+G+I PV HS P +HN F+ + +Y +P+ ++L + + + G SV P
Sbjct: 4 YGIIGWPVAHSLSPAMHNAAFKSLGIRAVYGLLPLAPENLAEGIKGIRALNIKGVSVTVP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE VM DE+ P+A I AVNTI+ + DG+L+G+NTD A+E+ I
Sbjct: 64 HKETVMPLLDEIDPVASEIGAVNTIVNK--DGRLLGFNTDWIGVKKALEEKIA------- 114
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
++G+ V+ GAGGA +A+ + GA V I++ FE+AK LA + G A P+
Sbjct: 115 -------ISGQKAVVVGAGGAAKAVVYALIKEGASVAIYNRTFEKAKRLAQTLGGVALPW 167
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
E++ + G IL T +G+ D+ PV +E L ++LV D VY P KTRLL++AE
Sbjct: 168 EELAS---ASGDILIQTTSVGL--KEDKSPVPKEVLSRFKLVMDIVYQPLKTRLLREAEE 222
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
AG + G+ M + Q I QF L+ G MRE
Sbjct: 223 AGCETIDGLSMLVYQGIEQFYLWFGARPQASLMRE 257
>gi|118479500|ref|YP_896651.1| shikimate 5-dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196044711|ref|ZP_03111945.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|229186574|ref|ZP_04313735.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|376268232|ref|YP_005120944.1| shikimate 5-dehydrogenase [Bacillus cereus F837/76]
gi|166219218|sp|A0RIV1.1|AROE_BACAH RecName: Full=Shikimate dehydrogenase
gi|118418725|gb|ABK87144.1| shikimate dehydrogenase [Bacillus thuringiensis str. Al Hakam]
gi|196024199|gb|EDX62872.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB108]
gi|228596833|gb|EEK54492.1| Shikimate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|364514032|gb|AEW57431.1| Shikimate 5-dehydrogenase I alpha [Bacillus cereus F837/76]
Length = 277
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + +GKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|229175009|ref|ZP_04302528.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|423457417|ref|ZP_17434214.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
gi|228608470|gb|EEK65773.1| Shikimate dehydrogenase [Bacillus cereus MM3]
gi|401147801|gb|EJQ55294.1| shikimate dehydrogenase [Bacillus cereus BAG5X2-1]
Length = 277
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 152/291 (52%), Gaps = 28/291 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + +ID R A +++ A
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK----EIDVANRTADKAKELIAAC 164
Query: 416 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
+ + EK I+ T +GMHP + P+ +L+ +V D +Y P
Sbjct: 165 TATVNSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEYTPLQISSLKKGTIVSDIIYNPF 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T++L +A+ GA+I +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIRKL 275
>gi|125973371|ref|YP_001037281.1| shikimate dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|256004347|ref|ZP_05429328.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|385778715|ref|YP_005687880.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|419722931|ref|ZP_14250067.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
gi|419724721|ref|ZP_14251780.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|125713596|gb|ABN52088.1| shikimate 5-dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|255991631|gb|EEU01732.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 2360]
gi|316940395|gb|ADU74429.1| shikimate 5-dehydrogenase [Clostridium thermocellum DSM 1313]
gi|380771940|gb|EIC05801.1| shikimate 5-dehydrogenase [Clostridium thermocellum YS]
gi|380780988|gb|EIC10650.1| shikimate 5-dehydrogenase [Clostridium thermocellum AD2]
Length = 298
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 140/282 (49%), Gaps = 25/282 (8%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+ TK+ GL+ PV HS P LHN + + +Y+P+ V +DL+ + DF
Sbjct: 6 RVTGKTKLLGLVGNPVEHSISPQLHNTLSSLLGLDIVYIPLAVGKEDLETVVKALKALDF 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V PYK +MK+ DE A + AVNT+ + DG+L GYNTD E +
Sbjct: 66 IGFNVTIPYKRDIMKYLDENSKEAILMGAVNTV--KKIDGRLYGYNTDAEGFL------- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
R +K G G+ VL GAGG RA+A S A ++ + + E++ LA
Sbjct: 117 --RSFKEEA---GVGFKGKKVVLIGAGGVARAIAVKIASEDAEKISVVNRTVEKSVELAE 171
Query: 410 DVMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVS-EETLRDYQLVF 461
V + + NF+ E+ I+ N T +GM+P T PV E Q+V+
Sbjct: 172 VVNENIKEIVQVYNFEDKTFRMAFEESDIIINTTSVGMYPKTRETPVKFTECFNKNQIVY 231
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
D +Y P KT+ L DAE GA I++G+ M Q I + ++TG
Sbjct: 232 DVIYNPEKTKFLNDAEKRGAKIINGLGMLFYQGISAYEIWTG 273
>gi|42783461|ref|NP_980708.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
gi|81699667|sp|Q730K1.1|AROE_BACC1 RecName: Full=Shikimate dehydrogenase
gi|42739390|gb|AAS43316.1| shikimate 5-dehydrogenase [Bacillus cereus ATCC 10987]
Length = 277
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ +I +
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-SISSK--- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E+ I+ T +GMHP + P+ +L +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GA+I +G++MF+ Q F ++TG+ E M+++V+ K
Sbjct: 229 LCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRKL 275
>gi|333995685|ref|YP_004528298.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
gi|333734548|gb|AEF80497.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema azotonutricium ZAS-9]
Length = 504
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 228/523 (43%), Gaps = 43/523 (8%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPVL 68
IC L +++ + + + Q + D+ E+R DC++ D ++ + P LPV+
Sbjct: 4 ICLCLTGKTLARDI-EVLQKYQKYVDIAELRADCLD-----PDERFLIRRFPEMAGLPVI 57
Query: 69 IVYRPKWAGGLYEGDEHKRL----EALHLAE-DLGADYVDFELKVASNILGKQYSSHQSG 123
+ R GG Y G E R+ + L AE D ++ +L+ + + ++ G
Sbjct: 58 LTIRRSLDGGKYVGGEGARITLLSKGLAFAEADRRRNFAYVDLEDDLYVPSLEEAARTYG 117
Query: 124 TRFIVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-V 181
TR I S N++ + DL + ++ G +++K + + R++Q +
Sbjct: 118 TRIIRSYHNMN---GVDHDLAAKLRELRRVGDELVKAAVMPQSLDDTIRVYQAAKETSDL 174
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVL-----GLPTVESLRQTYKVEHINA 236
I +G+ G+ +++L+ L Y ++KG P + G L + + I
Sbjct: 175 EKILLCMGDYGVSTRILAEPMGSYLSYTTVKGEPDMPAGASGQLDPRELAEQFHFREITG 234
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
TK+FG+ P+ S P N F + +Y+P D + +G SV
Sbjct: 235 KTKIFGVTGFPLKVSASPHFFNTVFDIEKTDAVYIPFPADSIHSLIRLAEEIRISGVSVT 294
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE+V+ F L Q+I A NTI+ +DG +GYNTD + G+
Sbjct: 295 VPYKESVLPFLFCKSDLVQSIGACNTIVS-SADG-WMGYNTDAQ-------------GFT 339
Query: 357 NGTASFG--SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 414
+ F L G+ + GAGG RA+A + +I + RA+ +A A
Sbjct: 340 DSLLEFSGRKDLRGKRVTIVGAGGVSRAVAAEVYRLKGKALILNRTAVRARDVALPYKFA 399
Query: 415 ARPFEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
++ + + I+ T +GM P D P+ +LV D +Y P KTR L
Sbjct: 400 WASLDNKGIEMMEKYADIIIQTTSVGMEPLPDADPIEFYHFTGKELVMDLIYKPAKTRCL 459
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
AEA+G I++G +M +RQA Q+ F GKE P + + L
Sbjct: 460 VRAEASGCRILNGYDMLIRQARYQYTYFMGKEFPPSLISRVKL 502
>gi|423400819|ref|ZP_17377992.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|423478476|ref|ZP_17455191.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
gi|401653809|gb|EJS71352.1| shikimate dehydrogenase [Bacillus cereus BAG2X1-2]
gi|402428638|gb|EJV60735.1| shikimate dehydrogenase [Bacillus cereus BAG6X1-1]
Length = 277
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 152/291 (52%), Gaps = 28/291 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ +DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKKIGAVNTVVH--NDGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + +ID R A +++ A
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVK----EIDVANRTVDKAKELIAAC 164
Query: 416 RPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
+ + EK I+ T +GMHP + P+ +L+ +V D +Y P
Sbjct: 165 TATVNSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPF 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T++L +A+ GA+I +G++MF+ Q F ++TG+ + M+++V+ K
Sbjct: 225 ETKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTGRVPNIDRMKQLVIRKL 275
>gi|428772149|ref|YP_007163937.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
gi|428686428|gb|AFZ46288.1| shikimate dehydrogenase [Cyanobacterium stanieri PCC 7202]
Length = 286
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 154/297 (51%), Gaps = 29/297 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I TKV G+I P+ HS PI+ N +N + IYVP V D L+ + + D
Sbjct: 2 NITGKTKVLGIIGNPIEHSLSPIIQNRAIAFLNLDYIYVPFPVMGDSLQVALDGFRAIDV 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P+K+AVM F E+ AQ I AVNT+ + P G NTD + I ++
Sbjct: 62 QGFNVTIPHKQAVMPFLSEISDTAQLIGAVNTVWQTPEGWH--GTNTDIDGFIAPLKAL- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDID-FERAKS 406
R +++ T ++ G GGA RA+ G G R VV +D ++ K+
Sbjct: 119 -NRDWEDVTP-----------IILGNGGASRAVVVGCAQLGCREIKVVGRSLDKLQQFKN 166
Query: 407 LASDVMGAAR----PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--- 459
+ + A+ P+ D+ + P ++ N TPLGM P+ D+ P+ ++ + +L
Sbjct: 167 SWDEQLLQAKITIHPWSDLNDTLPHS-ELIVNTTPLGMSPHVDKSPLDDQQISLLKLGAI 225
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
V+D +YTPR T LL+ A+ GAII+ G EM ++Q F ++T K AP + MR+ +L
Sbjct: 226 VYDLIYTPRPTLLLQKAQNQGAIIIDGTEMLVQQGAVGFQIWTEKNAPVDVMRQALL 282
>gi|257457569|ref|ZP_05622736.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
gi|257444955|gb|EEV20031.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema vincentii ATCC 35580]
Length = 496
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 220/492 (44%), Gaps = 59/492 (11%)
Query: 38 DVVEIRLDCINNFQPGKDLEIILTKK--PLPVLIVYRPKWAGGLYEGDEHKRL----EAL 91
D+VE+R D ++ P + L I K +PV++ R GG ++G E R+ L
Sbjct: 29 DIVELRADFLD---PQELLHIRTFPKIAHIPVILTVRRFLDGGQFKGGEGSRITLFARGL 85
Query: 92 HLAEDLGAD---YVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSR 148
A+ D Y+D E V + L + + G I+ +TP + D+ +
Sbjct: 86 AFADTDPLDNFAYLDLESDVQAPSLEEAAQAFNIG---IIRSIHSIKTPIK-DIAAKIRE 141
Query: 149 MQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY 208
++ T +I+K+ + +++ E+ +F+ ++G+ G+ S++L+PK + + VY
Sbjct: 142 IRRTDEEIVKIAYKADNLAEVTALFKQAQQLNGQNTLIAMGKYGIPSRILAPKLHSSFVY 201
Query: 209 GSLK---GTPVLGLPTVE--SLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRH 263
+ L ++ +L + Y+ IN T ++G+ S P +HN F
Sbjct: 202 TMPREYIAKYHLEQEYIDPITLTELYRFRAINDQTGIYGVAGADTTKSLSPAIHNRGFEK 261
Query: 264 VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI 323
N +Y+P+ ++++ AG S+ P+K V+ F D + P++ A AVNT+
Sbjct: 262 KELNAVYIPISGTNIQEVIEFAKCTGIAGLSITHPFKFDVIPFLDSLGPVSTACGAVNTV 321
Query: 324 IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL 383
+ + GK G NTD + I A+++ + R L + + G GGA A+
Sbjct: 322 LF--NGGKRQGLNTDIDGFIRALQEFLHVRN-----------LRFKHVAIIGTGGAAHAI 368
Query: 384 AFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE------------KGAI 431
A + +F E+AK LA D NFQ E I
Sbjct: 369 ANAVHQLHGKACVFGRSAEKAKKLA-----------DRYNFQWEILDLASVRILKKYSEI 417
Query: 432 LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFL 491
+ +T +GMH D P+ + + VFD +Y P KT LLK AEAAG I +G +M
Sbjct: 418 IIQSTSVGMHEGED--PLEFYSFSGNEKVFDVIYVPEKTTLLKRAEAAGCHICNGYDMLR 475
Query: 492 RQAIGQFNLFTG 503
QA QF LFTG
Sbjct: 476 YQAYKQFELFTG 487
>gi|165873244|ref|ZP_02217854.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227817111|ref|YP_002817120.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CDC 684]
gi|254750915|ref|ZP_05202954.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Vollum]
gi|254806730|sp|C3L5T8.1|AROE_BACAC RecName: Full=Shikimate dehydrogenase
gi|164711003|gb|EDR16570.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0488]
gi|227006413|gb|ACP16156.1| shikimate dehydrogenase [Bacillus anthracis str. CDC 684]
Length = 277
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 150/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|49187228|ref|YP_030480.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167634541|ref|ZP_02392861.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|167638665|ref|ZP_02396941.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|170687435|ref|ZP_02878652.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|177653290|ref|ZP_02935542.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190566996|ref|ZP_03019912.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034558|ref|ZP_03101967.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228948048|ref|ZP_04110333.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|254684091|ref|ZP_05147951.1| shikimate 5-dehydrogenase [Bacillus anthracis str. CNEVA-9066]
gi|254721925|ref|ZP_05183714.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A1055]
gi|254736439|ref|ZP_05194145.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Western North
America USA6153]
gi|254741476|ref|ZP_05199163.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Kruger B]
gi|254757757|ref|ZP_05209784.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Australia 94]
gi|421506588|ref|ZP_15953511.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|421638409|ref|ZP_16079005.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
gi|49181155|gb|AAT56531.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Sterne]
gi|167513513|gb|EDR88883.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0193]
gi|167529993|gb|EDR92728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0442]
gi|170668630|gb|EDT19376.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0465]
gi|172081572|gb|EDT66644.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0174]
gi|190561987|gb|EDV15956.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Tsiankovskii-I]
gi|195993100|gb|EDX57059.1| shikimate 5-dehydrogenase [Bacillus cereus W]
gi|228811634|gb|EEM57970.1| Shikimate dehydrogenase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|401823581|gb|EJT22728.1| shikimate 5-dehydrogenase [Bacillus anthracis str. UR-1]
gi|403394835|gb|EJY92075.1| shikimate 5-dehydrogenase [Bacillus anthracis str. BF1]
Length = 277
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 150/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|402815730|ref|ZP_10865322.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
gi|402506770|gb|EJW17293.1| shikimate dehydrogenase AroE [Paenibacillus alvei DSM 29]
Length = 298
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 159/293 (54%), Gaps = 21/293 (7%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
V +++ +KV+ +I P+ HSK P++HN + + NG+Y V + L+ + +
Sbjct: 13 VRNLDTSSKVYAVIGDPIAHSKSPLMHNAALQEMEVNGVYTAFHVKPEQLEHAVAGIRAL 72
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G +V P+KE VM + DE+ + I AVNTI+ +GKL GYNTD + ++++
Sbjct: 73 GLGGVNVTIPHKEQVMAYLDEIDESTRVIGAVNTIVH--CEGKLYGYNTDGLGYVRSLQE 130
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSL 407
++ + + V+ GAGGA R +A+ + G + + I + ERA +L
Sbjct: 131 EMQ------------ADIPSSRIVIIGAGGAARGIAYALLAEGCKELTIANRTVERAHAL 178
Query: 408 ASDVMGAARPFEDILN----FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
A D+ G + +LN P+ I+ T +GMHP+ D +PV++E L+ + LV D
Sbjct: 179 AEDLSGFGKVRSVMLNDTPAIPPQDVDIVIQTTSVGMHPHIDEMPVAKEWLQSHMLVSDI 238
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+Y P +T LL+ A+A G I +G+ MF+ Q F L+TG +AP E MR+ VL
Sbjct: 239 IYNPLETALLQAAKAQGCRIHNGLGMFVHQGAIAFELWTGMKAPTELMRQKVL 291
>gi|376261037|ref|YP_005147757.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
gi|373945031|gb|AEY65952.1| shikimate 5-dehydrogenase [Clostridium sp. BNL1100]
Length = 294
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 25/296 (8%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
VE +N T+++G++ P+ H+K P +HN F+ N +Y+P+ V++ L++
Sbjct: 4 VEIVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNAVYLPVLVENGKLEQVMDGLKGI 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+F GF+V PYK+ V+K+ DEV + A+NT+ + +G+ IG NTD E +
Sbjct: 64 NFLGFNVTVPYKKDVIKYLDEVSAEGMLMGAINTV--KKQNGRFIGTNTDAEGFV----- 116
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 407
R + +G F + G+ +L GAGG RA+A + G + I + AKS+
Sbjct: 117 ----RDFCDG---FETTFKGKRVMLLGAGGTSRAIAVKLATEGIEHLTIVNRTEANAKSI 169
Query: 408 AS-------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 459
+ +++ P +D L+ + E I+ N TP GM D P + QL
Sbjct: 170 SDLVNSNFGNIVNTMLPEKDKLDKELENNQIVINTTPAGMSTYLDSTPFDIDFNFNGTQL 229
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y P+KTR L AE AG I +G M + Q + F ++TG + ++ E++
Sbjct: 230 VYDVLYVPKKTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTGMQVERKQTNELL 285
>gi|379012573|ref|YP_005270385.1| shikimate dehydrogenase [Acetobacterium woodii DSM 1030]
gi|375303362|gb|AFA49496.1| shikimate dehydrogenase AroE [Acetobacterium woodii DSM 1030]
Length = 286
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 149/282 (52%), Gaps = 25/282 (8%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ DTK++ +I P+ S P LHN F+ + +Y+P+ V ++L+ + +F
Sbjct: 2 KISVDTKIYAVIGDPIAQSLSPQLHNGLFKEAGVDALYLPIAVKSENLENLIKGFRVMNF 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P+K ++K+ DE+ PLAQ I AVNT++ R DGK+ GYNTD I +IE+ I
Sbjct: 62 GGFNITKPHKMEIIKYLDELDPLAQKIGAVNTVVYR--DGKMKGYNTDGFGFIKSIENKI 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
++ P ++ G GGA +++A G +V+I + E+A++LA+
Sbjct: 120 VDQ-----------PKEKLNILILGCGGAVKSVAMALADWGINQVMIANRTMEKAETLAA 168
Query: 410 DV--------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
+ + A E+ L I+ N T LGM R P+ + + QL++
Sbjct: 169 QINDNWPGKAVAIAMETEE-LKKAAATATIIVNGTSLGMADTATRTPLPQALITKEQLIY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
D +Y+P T+L+KDA GA +G+EM L Q + F L+TG
Sbjct: 228 DMIYSPAVTQLMKDAREVGAQTENGLEMLLYQGLLAFELWTG 269
>gi|152976764|ref|YP_001376281.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
gi|189046305|sp|A7GT28.1|AROE_BACCN RecName: Full=Shikimate dehydrogenase
gi|152025516|gb|ABS23286.1| shikimate 5-dehydrogenase [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V++ L + + +G +V
Sbjct: 3 QLYGVIGNPIGHSLSPLMHNDAFEHLGIDAHYHAFLVEEEMLGEAVKGLKALGVSGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+MK+ DE+ PLA+ I AVNT++ R +GKL+GYNTD + +++ KE
Sbjct: 63 TPHKVAIMKYLDEIDPLAKQIGAVNTVVHR--NGKLVGYNTDGIGYVRSLQAISKE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD----V 411
PL + +L GAGGA RA+ + G + + I + E AK L + V
Sbjct: 117 --------PLRHKRMLLLGAGGACRAIYCSLVAAGVKEIDIANRTVETAKQLIASSKERV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+ A E Q E +L T +GMHP+ P+ +L+ +V D +Y P +T+
Sbjct: 169 VSKALSLEKATEAQ-ENYDVLIQTTTIGMHPHVQHTPMQIGSLKQGAIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L DA+ +GAI+ +G++MF+ Q F ++TG M+++V+ K
Sbjct: 228 FLHDAKLSGAIVQNGIDMFVYQGALAFEMWTGMMPDINRMKQLVIRKL 275
>gi|46446516|ref|YP_007881.1| 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphat e synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400157|emb|CAF23606.1| putative 3-phosphoshikimate
1-carboxyvinyltransferase(5-enolpyruvylshikimate-3-
phosphate synthase, EPSP synthase) [Candidatus
Protochlamydia amoebophila UWE25]
Length = 939
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 233/524 (44%), Gaps = 51/524 (9%)
Query: 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVL 68
++ +C L+ + + + + Q ++ D++EIRLD + +L+ + P++
Sbjct: 16 HSCQLCVSLIDLTCDAFIYQIQQLPSQ-VDLIEIRLDKLLKIDFA-ELDRLKEIAHRPLI 73
Query: 69 IVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
R K GG + G+ K+ D+VD E + L ++ T++I+
Sbjct: 74 WTLRKKSQGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWL-QELQKISPQTQWII 132
Query: 129 SCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLS----HCQVPII 184
S + ETP L + ++ A + KL + I + ++ ++ H + +
Sbjct: 133 SWHEVKETPH---LKTCLDQLYALPGNYYKLACYTHSIIDSLKLLEMAQQENKHSR-RLC 188
Query: 185 AYSVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEHINADTKV 240
+G +G +++L+P + SLK P G + ++L QTY+ + ++ T++
Sbjct: 189 TIGLGMKGQCTRILAPVTGQPFTFASLKEGLESAP--GQISFQTLFQTYRFKKLSQQTEI 246
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFP 298
FGLI P+ S + HN H+N N +Y+ V++ L+ FF GFSV P
Sbjct: 247 FGLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRGFSVTMP 306
Query: 299 YKEAVMKFC-----DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA--IEDAIK 351
+KE V K DE H A NT++ S + G NTD ++ A +ED
Sbjct: 307 HKERVKKILALNMDDESH------LACNTLLF--SSSIINGTNTDGIGALKALKVED--- 355
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
L + +L GAGG +A+A+ AK RGA V I + RAK +A +
Sbjct: 356 --------------LKDKKLILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEKI 401
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
FE + + + IL T +GM P+ D + VS + + D + P +T
Sbjct: 402 QVKWGGFEQLKEAKKNECDILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETL 461
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
L+ A G I G+E+F+ QA QF + K+ ++ + + +
Sbjct: 462 FLQKARLKGCEIHHGIELFIHQAAFQFGFWFNKQFDQKLIEQTI 505
>gi|326203602|ref|ZP_08193466.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
gi|325986422|gb|EGD47254.1| shikimate 5-dehydrogenase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 147/296 (49%), Gaps = 25/296 (8%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
VE +N T+++G++ P+ H+K P +HN F+ NG+Y+P+ V+ L++ +
Sbjct: 4 VEFVNGKTQLYGVLGNPIEHTKSPFIHNTLFKKFGVNGVYLPVLVETGKLEQVMNGLKGI 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+F GF+V PYK+ V+ + DEV + A+NT+ + +G+ IG NTD E + D
Sbjct: 64 NFLGFNVTVPYKKDVINYLDEVSAEGMLMGAINTV--KKQNGRFIGSNTDAEGFVRDFCD 121
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 407
FG+ G+ +L GAGG RA+A G + I + AKS+
Sbjct: 122 G------------FGTTFKGKRVMLLGAGGTSRAIAVRLAMEGIEHLTIVNRTEANAKSI 169
Query: 408 ASDVMG-------AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 459
++ V G P +D L+ E I+ N TP GM D P + QL
Sbjct: 170 SNLVNGNFGNLVSTMLPEKDKLDKAIENSQIVINTTPAGMSTYLDSTPFDIDFNFNGTQL 229
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y P+KTR L AE AG I +G M + Q + F ++TG + ++ E++
Sbjct: 230 VYDVLYVPKKTRFLIQAENAGCKIRNGFGMLINQGVSSFEIWTGIKVERKETNELL 285
>gi|288560500|ref|YP_003423986.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
gi|288543210|gb|ADC47094.1| shikimate 5-dehydrogenase AroE [Methanobrevibacter ruminantium M1]
Length = 298
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 33/305 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ TK+ G+I P+ H+ P + N +N N IY+P V D+L +
Sbjct: 2 VDGKTKILGVIGDPIEHTFSPAMQNAGLEALNLNYIYLPFHVKSDNLNSAIEGAKTLGIR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLI---GYNTDCEASITAIED 348
G +V P+K V+ DEV P+A I AVNTI + + I GYNTD + AIE+
Sbjct: 62 GLNVTIPHKREVITCLDEVDPIANMIGAVNTIKFDYDENEGISTKGYNTDAYGCLRAIEE 121
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSL 407
+ + + + GAGGA RA+AF A S + I + +F +A+SL
Sbjct: 122 K--------------ASVKDKKITIVGAGGASRAIAFQMASSDIGELSILNRNFNKAESL 167
Query: 408 ASDVMGAARPFEDILNF------------QPEKGAILANATPLGMHPNTDRVPV-SEETL 454
A+D+ + D N + ++ IL + TP+GM+PN + P+ S + +
Sbjct: 168 ANDIKSNLKQLNDNFNLNINAYDMDSLKREIQESEILIDTTPIGMYPNINDKPIASADMM 227
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
D +V D VYTP +T L+K+A+ A A +V G +M L Q I F ++ G+EAP + M
Sbjct: 228 HDDLIVNDIVYTPMETSLIKEAKKANAEVVYGYKMLLYQGIRSFEIWLGEEAPVKEMENA 287
Query: 515 VLAKF 519
+L F
Sbjct: 288 LLKVF 292
>gi|225866315|ref|YP_002751693.1| shikimate 5-dehydrogenase [Bacillus cereus 03BB102]
gi|254806731|sp|C1ESM8.1|AROE_BACC3 RecName: Full=Shikimate dehydrogenase
gi|225789755|gb|ACO29972.1| shikimate dehydrogenase [Bacillus cereus 03BB102]
Length = 277
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 153/290 (52%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + +GKL GYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLTGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
A E E+G+ I+ T +GMHP + P+ +L+ +V D +Y P +
Sbjct: 169 HSVALSLE---KATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T++L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 226 TKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|20807710|ref|NP_622881.1| shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|254479120|ref|ZP_05092471.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
gi|24211499|sp|Q8RAG2.1|AROE_THETN RecName: Full=Shikimate dehydrogenase
gi|20516261|gb|AAM24485.1| Shikimate 5-dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|214034934|gb|EEB75657.1| shikimate 5-dehydrogenase [Carboxydibrachium pacificum DSM 12653]
Length = 280
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 26/289 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TKVFGLI PV HS P++HN +F +N+NG+YV V + L+ +
Sbjct: 3 IDSTTKVFGLIGHPVKHSLSPLIHNSSFEKLNFNGVYVVFDVAPELLENAVKGLKALGIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+KE+VM + D V A+ I AVNT++ +G L GYNTD + I D++K
Sbjct: 63 GFNVTVPHKESVMNYLDFVTEEAEKIGAVNTVVNE--NGILKGYNTDVQGFI----DSLK 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
E + GR + GAGGA +A+ F G +VI + +AK+LA
Sbjct: 117 E---------LKEDVRGRKAFVLGAGGASKAICFALAREGVESIVIANRTLNKAKALAEY 167
Query: 411 VMGAAR------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
+ + E++ F + IL N T +GMHP PVSEE + V+D +
Sbjct: 168 IREEFKMKCDYCSIEEVEKFN--EIDILINTTSVGMHPEVGNSPVSEEVVAKANFVYDLI 225
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
Y P +T LK A G +G+ M + QA F L+TG+ K+F+ E
Sbjct: 226 YNPSETLFLKYARKNGVKSANGLSMLVNQASYAFYLWTGEFFDKDFVYE 274
>gi|229031985|ref|ZP_04187970.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
gi|228729340|gb|EEL80332.1| Shikimate dehydrogenase [Bacillus cereus AH1271]
Length = 277
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 150/287 (52%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + D++ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDKIDPLAKKIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
PL + +L GAGGA RA+ F G + + + + ++AK L +
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIASCTATV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
L E+ I+ T +GMHP + P+ +L+ +V D +Y P +T++
Sbjct: 169 HSVALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKI 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +A+ GA++ +G++MF+ Q F ++TG + M+++V+ K
Sbjct: 229 LCEAKEQGAVVQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVIRKL 275
>gi|114566075|ref|YP_753229.1| shikimate 5-dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122318819|sp|Q0AZJ6.1|AROE_SYNWW RecName: Full=Shikimate dehydrogenase
gi|114337010|gb|ABI67858.1| shikimate dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 290
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 158/293 (53%), Gaps = 27/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ T++ GLI P+ HS P++HN T + + N IY+ + +++ L + S + +F
Sbjct: 3 LDIKTELMGLIGYPLQHSLSPLMHNLTLKKMGLNCIYLALEIEEGKLPEIPSAIRTLNFR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKE ++ F DE+ P A A AVN I + +G L GYNTD + +A++
Sbjct: 63 GLNVTIPYKEKIIPFLDELSPEAAAFGAVNVI--KNKNGHLHGYNTDGRGFV----EALR 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
E G G + +F+ GAGGA R++AF G +R+ D+DF RA+ LA
Sbjct: 117 EEGIDPGERA--------LFI--GAGGAARSVAFALAGLGVSRLDFLDLDFSRARQLAEF 166
Query: 411 VMG-----AARPFEDILNFQ--PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-D 462
+ A+ + L FQ +I+ N +P+GM P+T + PVS+E LR + V D
Sbjct: 167 ITSRSSSLASAFLMNTLEFQRLSRTASIIINCSPVGMFPDTGKSPVSKEDLRGSRAVLCD 226
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+Y P ++R L + G ++G+ MF++Q + G++ P ++M+E+V
Sbjct: 227 LIYNPLQSRFLSLGQELGLETMNGLGMFVQQGALTLEILLGQKPPLDYMKEVV 279
>gi|301057611|ref|ZP_07198691.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
gi|300448335|gb|EFK12020.1| shikimate dehydrogenase [delta proteobacterium NaphS2]
Length = 272
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 143/277 (51%), Gaps = 19/277 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
K++G++ PVGHS P +HN F ++ Y DLK + +G S+ P
Sbjct: 7 KIYGVLGNPVGHSLSPAMHNAAFEALDIPSFYGAFKTTDLKGCIRGMRALGISGMSITIP 66
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+K VM + D + PLA+ I AVNTI+ +G L GYNTD ++ A+E +
Sbjct: 67 FKTDVMAYLDALDPLAEQIGAVNTIVNE--NGLLRGYNTDGAGAMKALEAVVDP------ 118
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
G+ VL GAGGA R + F A G ++ + + R ++LA + P
Sbjct: 119 --------VGKRCVLVGAGGAARGIGFMAVKNGMKLTVSNRSENRGRTLADFLECPFVPL 170
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
+I + + +L TP+GM P + PVS + R+ +V DAVY P +T++LKDA +
Sbjct: 171 SEIKSLDTD---VLIQTTPVGMFPRENASPVSADMFREGMVVMDAVYNPMETKMLKDARS 227
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
G + G+EMF+ Q QF L+TG EAP + MR +V
Sbjct: 228 RGCETIGGLEMFIHQGALQFQLWTGLEAPLKVMRAVV 264
>gi|30264406|ref|NP_846783.1| shikimate 5-dehydrogenase [Bacillus anthracis str. Ames]
gi|47529857|ref|YP_021206.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|65321706|ref|ZP_00394665.1| COG0169: Shikimate 5-dehydrogenase [Bacillus anthracis str. A2012]
gi|170707392|ref|ZP_02897846.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229603912|ref|YP_002868624.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0248]
gi|30259064|gb|AAP28269.1| shikimate dehydrogenase [Bacillus anthracis str. Ames]
gi|47505005|gb|AAT33681.1| shikimate 5-dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']
gi|170127636|gb|EDS96509.1| shikimate 5-dehydrogenase [Bacillus anthracis str. A0389]
gi|229268320|gb|ACQ49957.1| shikimate dehydrogenase [Bacillus anthracis str. A0248]
Length = 308
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 149/285 (52%), Gaps = 22/285 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVI 272
>gi|295706669|ref|YP_003599744.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294804328|gb|ADF41394.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 279
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 23/290 (7%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 295
+ ++GL+ P+GHS P++ N F+ +N + Y P+ + + GF+V
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVHFESAIGELKDKNIQGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYK +MK DEV PLA+AI AVNT++++ DG+ IGYNTD E +T++ A++
Sbjct: 62 TIPYKVDIMKHLDEVDPLAKAIGAVNTVVKQ--DGRYIGYNTDGEGYVTSLLKAVE---- 115
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR--VVIFDIDFERAKSLASDV-- 411
GS L+ + ++ GAGGA +A+ + ++ A + I + E+A LA+++
Sbjct: 116 -------GS-LSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAVLANELPF 167
Query: 412 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
AA D Q + I+ N T +GM+PN D +P++ L+ +V D +Y P K
Sbjct: 168 STKTAAMSISDA-EKQLDTFDIIINTTSVGMYPNVDELPLALTLLQKEAVVSDIIYNPLK 226
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T+LLK+AEA GA +GV MF+ Q F +T +E M IVL+
Sbjct: 227 TKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNVRPDEEAMEHIVLSTL 276
>gi|282898783|ref|ZP_06306770.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
gi|281196310|gb|EFA71220.1| Quinate/Shikimate 5-dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 30/288 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ + +Y+P + D+L++ + ++S
Sbjct: 12 ITGKTKIMGVIGYPVEHSLSPLMHNAALHHLGLDYVYLPFPIAPDNLQQAIAGFASIGVV 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ E+ P+AQAI AVNT+IR + IG NTD I ++
Sbjct: 72 GFNVTIPHKQAIIPLLHEISPVAQAIGAVNTVIR--VGERWIGTNTDVAGFIAPLQTTYN 129
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ ++ + V+ G GGA RA+ G G A + + + E+ K L
Sbjct: 130 QNWHE------------KKAVVIGNGGAARAVVAGCIQLGMAEIHLVGRNIEKLKQLEQS 177
Query: 411 VMGAARPFE----------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DY 457
+ + E D L + +L N TP+GM+PN D PV+E+ L +
Sbjct: 178 WIDSPLAHELTNKLKTHSWDQLPQLIPQCNLLVNTTPIGMYPNIDESPVTEDQLHKLPSH 237
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+ +D +YTP+ TR L+ A+A GAI + G+EM ++Q L+ +E
Sbjct: 238 AIAYDLIYTPKPTRFLQLAQAQGAIALDGLEMLVQQGAAALKLWLQQE 285
>gi|386738224|ref|YP_006211405.1| shikimate dehydrogenase [Bacillus anthracis str. H9401]
gi|384388076|gb|AFH85737.1| Shikimate dehydrogenase [Bacillus anthracis str. H9401]
Length = 277
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 149/288 (51%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+ + Y V + L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M + DE+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E
Sbjct: 63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL + +L GAGGA RA+ F G + + + + ++AK L + V
Sbjct: 117 --------PLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T + MHP + P+ +L+ +V D +Y P +T+
Sbjct: 169 HSVALSLEKATKEQGNYDIII-QTTTICMHPRVEHTPLQISSLKKGTIVSDIIYNPFETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +A+ GAII +G++MF+ Q F ++TG E M+++V+ K
Sbjct: 228 ILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRKL 275
>gi|294501322|ref|YP_003565022.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294351259|gb|ADE71588.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 279
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 155/290 (53%), Gaps = 23/290 (7%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 295
+ ++GL+ P+GHS P++ N F+ +N + Y P+ + + GF+V
Sbjct: 2 STLYGLVGYPLGHSLSPLMQNDAFKRLNMDAHYEAFPIEPVHFESAIGELKDKNIQGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYK +MK DEV PLA+AI AVNT++ + DG+ IGYNTD E +T++ A++
Sbjct: 62 TIPYKVDIMKHLDEVDPLAKAIGAVNTVVNQ--DGRYIGYNTDGEGYVTSLLKAVE---- 115
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR--VVIFDIDFERAKSLASDV-- 411
GS L+ + ++ GAGGA +A+ + ++ A + I + E+A LA+++
Sbjct: 116 -------GS-LSQKRILIIGAGGAAKAIFYTIAAQHAPEVIAICNRTVEKAAILANELPF 167
Query: 412 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
AA D Q + I+ N T +GM+PN D +P++ L+ +V D +Y P K
Sbjct: 168 STKTAAMSISDA-EKQLDTFDIIINTTSVGMYPNVDELPLALTLLQKEAVVSDIIYNPLK 226
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T+LLK+AEA GA +GV MF+ Q F +T +E M IVL+
Sbjct: 227 TKLLKEAEAKGAGTHNGVGMFVLQGALAFEKWTNVRPDEEAMEHIVLSTL 276
>gi|374299531|ref|YP_005051170.1| shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
gi|332552467|gb|EGJ49511.1| Shikimate dehydrogenase [Desulfovibrio africanus str. Walvis Bay]
Length = 305
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 141/278 (50%), Gaps = 24/278 (8%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPY 299
G+I P+GHS P+LHN FR V G Y+ PM + L F + + G SV P+
Sbjct: 41 GIIGNPLGHSLSPVLHNWAFREVGVAGTYMAWPMAPESLDDFMAAVLTLPIWGVSVTIPH 100
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
K +MKFC+E+ +A AVNT+ + G L G NTD + + + E G K +
Sbjct: 101 KTGIMKFCEELSGRCRAAGAVNTLHWK--KGLLCGENTDVQGFLAPL----AEIGIKPAS 154
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPF 418
A ++ GAGGA RA+ G + G R + + + E A++L + + +
Sbjct: 155 A-----------LILGAGGAARAVIAGLREWGVRSIHVANRTPEAARTLCNHMRCQGVAW 203
Query: 419 EDILNFQPEKGAILANATPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
E+ Q E +L NATPLGM D P E+ Q+V+D +Y P TR L +A
Sbjct: 204 EERTGVQAE---LLVNATPLGMLGERQDATPWPVESFTRGQIVYDLIYNPIDTRFLVEAR 260
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
AG ++ G+EMFL QA QF L+T +E P + R +V
Sbjct: 261 QAGCAVIPGLEMFLHQAAAQFRLWTDEELPLDGARRLV 298
>gi|427727930|ref|YP_007074167.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
gi|427363849|gb|AFY46570.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7524]
Length = 292
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 152/294 (51%), Gaps = 29/294 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + IY+P + ++L+ + ++ D
Sbjct: 2 ITGTTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYIYLPFPIKPENLEVAIAGLAAIDVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R + + +G NTD E I+ ++ +
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPIAQAIGAVNTVTRH--NNQWVGTNTDIEGFISPLQTTYQ 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ + TA V+ G GGA RA+ G G A + + + +R K
Sbjct: 120 QD-WSQKTA-----------VILGNGGAARAVVAGCYQLGFAEIHVIGRNPQRLKEFQHS 167
Query: 411 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 460
+ P++++ PE +L N TP+GM+P+ D PVS E + + Q +
Sbjct: 168 WESSPIADNLQVHPWDNLAKLIPEAN-LLVNTTPIGMYPHVDESPVSVEEMANLQTGAIA 226
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
+D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ +E P + MR+
Sbjct: 227 YDLIYIPQPTKFLQYAQQQGAIAIDGLEMLVQQGVAALKIWLQRETLPVDVMRQ 280
>gi|384107652|ref|ZP_10008550.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
gi|383870508|gb|EID86110.1| Shikimate 5-dehydrogenase [Treponema sp. JC4]
Length = 498
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 245/520 (47%), Gaps = 57/520 (10%)
Query: 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL----PV 67
+IC L +++E+ + + Q + DV+E+R D ++ ++ ++++ K P P
Sbjct: 5 LICMTLTGKTIEEDI-KLSQKYEKFCDVLELRADHLD-----ENEQLLIRKFPALVKKPC 58
Query: 68 LIVYRPKWAGGLYEGDEHKRL----EALHLAE---DLGADYVDFELKVASNILGKQYSSH 120
++ R GGL+ G++ R AL A+ YVDFE +I Q ++
Sbjct: 59 ILTIRRDSDGGLWTGNDFSRTNLFGRALAFADPDKKRNFAYVDFEEDY--HIPSIQDAAM 116
Query: 121 QSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQ---LLS 177
G R I SC+ T +L M+ TG +I K+ F ++++ +F L++
Sbjct: 117 AFGVRIIRSCH--NMTEPIHNLRKRCDAMRKTGYEIPKIAFMPKTLSDVVNLFHESSLMT 174
Query: 178 HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEH 233
+ ++A +G G+ S++L+ N + Y S + T +G L Y +
Sbjct: 175 NYDHILVA--MGAEGMPSRILTSISNSYMTYTSPQETADKTASIGHIDPVVLNDLYNFKG 232
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T++FG+ P+ + P +HN +RH + +Y P+ + + + D G
Sbjct: 233 ISKSTQLFGITGWPLVKTSSPEIHNMGYRHHGIDAVYFPIRSQLISESLNFAEQLDVKGM 292
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE+V+ + E+ P I A NT++R+ + K IGYNTDC T E A+ E
Sbjct: 293 SVTIPFKESVLYYLHELSPEVMQIGACNTVVRK--NYKWIGYNTDC----TGFERALLE- 345
Query: 354 GYKNGTASFGSPLAGRMFVLA--GAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-- 409
GS + + ++ GAGGA +A+A+ K G + IF+ E A+ LA
Sbjct: 346 -------FLGSNVKTKKMKVSIIGAGGAAKAIAYTVKKLGMKACIFNRTLETAQKLAEKY 398
Query: 410 DVMGAARPFEDILNFQPEKGAILANATPLGMH------PNTDRVPVSEETLRDYQLVFDA 463
D M AA+ E E +++ T +GM+ P D P+ R + VFD
Sbjct: 399 DFM-AAKLDETSAMILDEYSSLIIQTTSVGMNAEGPISPEND--PIYFYKFRGTEKVFDI 455
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
VY P T +++ A AAG + +G +M QA QF LFTG
Sbjct: 456 VYVPASTPVMRRASAAGCKVCNGYKMLEYQAYEQFKLFTG 495
>gi|452994696|emb|CCQ93699.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 287
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 148/294 (50%), Gaps = 32/294 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++GL PV HS P++ F +N +Y+ + + LK+ +
Sbjct: 7 VDSKTSLYGLFGNPVAHSLSPVMQQAAFMERGFNAVYLAFAIQKEKLKEAVEAIRALSIQ 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYK V+ F DEV A I AVNTI + G+L GYNTD + I ++E+
Sbjct: 67 GVNVTIPYKVEVIPFLDEVEEEASIIGAVNTI--KNEGGRLRGYNTDGKGFIRSLEEEFH 124
Query: 352 -ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
+ NGT + GAGGA R++A +G R+ I + + E+A+ LA
Sbjct: 125 PDWSSMNGT-------------ILGAGGAVRSVAVALARKGVKRITIVNRNREKAEELAR 171
Query: 410 --------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
V G R L+ + +L N TP+GMHP+ + PV++E L +V
Sbjct: 172 LISAWTSVQVEGWER-----LSSTLKGSNLLINGTPIGMHPHVEETPVAQEALHQDLIVS 226
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+ VYTP TRLL++A+ GA I G+ MF+ Q F ++TGK AP M ++V
Sbjct: 227 ELVYTPLYTRLLREAKEKGAKIHPGLMMFVYQGAIAFEIWTGKTAPVNLMEQVV 280
>gi|302035827|ref|YP_003796149.1| shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
gi|300603891|emb|CBK40223.1| Shikimate 5-dehydrogenase [Candidatus Nitrospira defluvii]
Length = 284
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 155/297 (52%), Gaps = 27/297 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-G 292
I T+ G+I PV HS P +HN F+ + + +Y+ V+ L + A G
Sbjct: 3 ITTQTQWCGIIGNPVEHSLSPAIHNAAFQRMGLDLVYLAFRVEALGDALKGVRALGNARG 62
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
FSV P+K A + F DEV P A+ I A+NTI+ +GKL GYNTD ++ A+++
Sbjct: 63 FSVTIPHKVAAIPFLDEVEPTAKHIGAINTIVV--EEGKLKGYNTDASGALRALKEG--- 117
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASD 410
G+ L G ++ G+GGA RA+AF + A + I I+ + L D
Sbjct: 118 ----------GALLDGHRVLILGSGGAARAIAFALATGTGIAGLTILGIEEGERQKLVKD 167
Query: 411 VMGAAR-PFED-------ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
+ A P ED + N+ P ++ + TP+GM P D V R V D
Sbjct: 168 LRDKANIPIEDGPLTLDMLRNWVPHVRTLI-HCTPVGMSPRIDESCVPTNLFRPELTVMD 226
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
VY PR+T+LL++A+AAG +SG+EMFL QA+ QF L+T + AP + MR ++ ++F
Sbjct: 227 IVYNPRETKLLQEAKAAGCRTISGLEMFLNQAVLQFELWTKQPAPADVMRRVLESRF 283
>gi|9087115|sp|O26344.2|AROE_METTH RecName: Full=Shikimate dehydrogenase
Length = 283
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 146/289 (50%), Gaps = 25/289 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T V G++ P+GHS PI+HN FR + + IYVP V ++LK +
Sbjct: 2 ITGKTHVTGIMGHPLGHSLSPIMHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVE 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAV+++ D++H A I AVNT+ + DG + GYNTD + A+E+
Sbjct: 62 GVNVTIPHKEAVLEYIDDIHGTAALIGAVNTL--KFDDGTVRGYNTDASGCLRALEEVTS 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
G G F LA G + + I + E+A+ LA D
Sbjct: 120 VEGSSVLILGAGGAARACAFQLAEKGASD-------------ITILNRTPEKARLLAED- 165
Query: 412 MGAARPFE------DILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 464
M FE +++ + IL + TP+GMHP+TD P V E + + +V D V
Sbjct: 166 MADKLGFEASYGGYELIQGSVKSADILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDLV 225
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
Y P++T LL++AE A AI VSG+ M L Q + F ++TG++ P + M +
Sbjct: 226 YNPQRTVLLREAERASAIPVSGIRMLLYQGVEAFRIWTGRDPPLDVMED 274
>gi|297616585|ref|YP_003701744.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
gi|297144422|gb|ADI01179.1| shikimate 5-dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
Length = 291
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 152/295 (51%), Gaps = 26/295 (8%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDF 290
+ ADT+V G+I P+GHS P +HN H+ N +YVP VD+ LK+ +
Sbjct: 2 QVKADTRVLGIIGNPLGHSLSPQMHNRALEHLRLNYVYVPFVVDNHALKEAVDGIRALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KEAV+ + D++ A+ A N + + GKL+GYNTD + +++
Sbjct: 62 DGVNVTIPFKEAVIGYLDDLSEEARWCGAANVV--KNCGGKLVGYNTDGAGFMASLQ--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLAS 409
E+G G G+ V+ GAGGA RA+ + ++ +V+ + +RA++LA
Sbjct: 117 -EQGVLPG---------GQRVVVLGAGGAARAITYHLVQAEVESLVLINRSVDRAEALAG 166
Query: 410 DVMGAAR-PFEDI------LNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVF 461
++ G P + + L E+ +L N T +GM+P +P + E +V
Sbjct: 167 ELEGIGDVPVKAVGWERACLQEAIEEADLLINTTSIGMYPWIREMPPLDPEWFHPGLVVC 226
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
D VY P +TRLL +A G V+GV MF+ Q F L TG AP E MRE+V+
Sbjct: 227 DIVYNPIQTRLLMEASMRGLKTVNGVGMFVHQGALAFQLLTGVAAPLEVMREVVI 281
>gi|428308139|ref|YP_007144964.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
gi|428249674|gb|AFZ15454.1| shikimate dehydrogenase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 29/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I P+ HS P++HN H+ + +Y+P + +DL+ + +++ D
Sbjct: 4 IKGTTKLLGVIGSPIEHSLSPVMHNAAITHLGLDYVYLPFPIKPEDLEIAIAGFAAIDLV 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ P+AQA+ AVNT+ R + G NTD E I + D
Sbjct: 64 GFSVTIPHKQAIMPLLSEISPVAQAVGAVNTVWRNHNGWS--GTNTDVEGFIAPLRD--H 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS- 409
R ++ A V+ G GGA RA+ G G ++V + + ++
Sbjct: 120 NRNWQESVA-----------VILGNGGASRAVVAGCAQLGFSKVQVVGRNQDKLNQFLDS 168
Query: 410 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 460
DV + +E++ N + +L N TP+GMHP+ + PV E + +
Sbjct: 169 FTNSPLDVNLSVHQWEELPNLI-SQANLLVNTTPIGMHPHVNDSPVDAELMAKLPTDAIA 227
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+D +YTP+ T+ LK A+ GAI + G+EM + Q ++ + P + MR+
Sbjct: 228 YDIIYTPKPTQFLKAAQNFGAITIDGLEMLIYQGAAALKIWLNQPIPVDIMRQ 280
>gi|158319101|ref|YP_001511608.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
gi|166988268|sp|A8MEE1.1|AROE_ALKOO RecName: Full=Shikimate dehydrogenase
gi|158139300|gb|ABW17612.1| shikimate 5-dehydrogenase [Alkaliphilus oremlandii OhILAs]
Length = 286
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 29/298 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I +TK+ G+I +P+ S P +HN F+++N N IY+P V DL K F
Sbjct: 5 ITDETKLTGIIGRPIKQSFSPKIHNGAFQYLNLNYIYIPFEVVQQDLSKTVEAMKVLKFR 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VM + DEV A+ I AVNT++ + +GKL+G+NTD + + ++ED
Sbjct: 65 GFNVTMPHKREVMNYLDEVSENAKIIGAVNTVVNQ--NGKLVGHNTDGKGYVQSLEDE-- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
G + + FV+AGAGGA R++A GA+ + I + ++A +A
Sbjct: 121 -----------GIYVKEKTFVIAGAGGAARSVAVQLALDGAKKITILNRTIDKAHDIAQ- 168
Query: 411 VMGAARPFEDI---------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
++G + P I L E+ +L N T LGM+ + + EE + LV
Sbjct: 169 LIGMSIPNVHIEINCLENKTLAKAVEEADVLINTTSLGMYSMEEESIIGEEKVLPSNLVV 228
Query: 462 -DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
D +Y P KT+LL+ AE+ G ++G+ M + QA F L+T P +++++ + +
Sbjct: 229 SDLIYNPAKTKLLQQAESRGCKTINGLGMLIGQAAIAFELWTEVAMPIDYIKKTLFTR 286
>gi|365157945|ref|ZP_09354189.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
gi|363622355|gb|EHL73521.1| shikimate 5-dehydrogenase [Bacillus smithii 7_3_47FAA]
Length = 282
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+ HS P +HN F + Y P V +DLKK + GF+V
Sbjct: 3 KLYGVIGDPIAHSMSPAMHNDAFSRLGIPAYYHPFHVKPNDLKKAVEGMKAIGVEGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A++ DE+ PLA+AI AVNT++R+ + + IGYNTD + + RG K
Sbjct: 63 IPHKTAIIPLLDELDPLAEAIGAVNTVVRK--NDRWIGYNTDGDGFV---------RGLK 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
+ G L ++ GAGGA RA+ + S R++ I + E+A LA
Sbjct: 112 E---TLGRDLHLDHILIIGAGGAARAIYYTLASEHVRLIDIANRTMEKAARLAEQC---- 164
Query: 416 RPFEDILNF----QPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
PFE N + E+ +I+ T +GM P TD +P+S L+ V D +Y P
Sbjct: 165 -PFETKTNVLSISEAEQRMGNYSIVIQTTSIGMSPKTDEMPLSLSLLKKGTFVSDIIYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T+ L +A+ GAI +G++MF+ Q + F +TG M +IVL +
Sbjct: 224 LETKFLAEAKKQGAITQNGIKMFVYQGVSAFEKWTGVSPDANRMEKIVLEQL 275
>gi|222445470|ref|ZP_03607985.1| hypothetical protein METSMIALI_01109 [Methanobrevibacter smithii
DSM 2375]
gi|222435035|gb|EEE42200.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2375]
Length = 281
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 148/292 (50%), Gaps = 32/292 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VMK+ D++ P+A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 410
+ + + V+AGAGGA RA++F A+ + I + D +AKSLA D
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 411 VMGAARPFEDILNFQP--------EKGAILANATPLGMHPN-TDRVPVSEETLRDYQLVF 461
V + D ++F IL + TP+GM P+ D V E + +V
Sbjct: 164 VKNSK--LTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVN 221
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D VY P +T LL +A AGA V G++M L Q F ++TG++AP + M +
Sbjct: 222 DIVYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|297170988|gb|ADI22003.1| shikimate 5-dehydrogenase [uncultured myxobacterium HF0200_01L06]
Length = 274
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 146/280 (52%), Gaps = 22/280 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+A T + G++ P GH++ P +HN F + + Y+ V DDL+ S +
Sbjct: 5 ISATTALCGILLHPAGHTRSPAMHNAAFEALGIDASYLAFDVHPDDLEAALSGARALGVR 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
++ P+K AV+ DEV +AQAI AVNT+ G+ G NTD ++ A+E +
Sbjct: 65 QLAISLPHKIAVLDHLDEVDSVAQAIGAVNTVTF--DGGRARGTNTDWLGAVEALE---R 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E +P+A + V+ GAGG R++ +G RGA V + ++ A++
Sbjct: 120 E-----------APIAQQHAVVLGAGGTARSVVYGLLQRGATVSV--LNRTEARAEELAA 166
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A+ + + + +L N T +G+ +DR PV+ LR+ +V DAVY P TR
Sbjct: 167 ELGAQQAGPLASLKSTAYDLLVNTTSVGL--RSDRSPVAPSDLREQAVVLDAVYDPETTR 224
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
LL+DA+AAGA V G M + QA Q ++TGKEAP E M
Sbjct: 225 LLRDAQAAGAATVQGKWMLVYQAAEQLRIWTGKEAPLEIM 264
>gi|154485097|ref|ZP_02027545.1| hypothetical protein EUBVEN_02820 [Eubacterium ventriosum ATCC
27560]
gi|149734050|gb|EDM50169.1| shikimate dehydrogenase [Eubacterium ventriosum ATCC 27560]
Length = 289
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
+ I T++ GL+ PV HSK P++HN +R + + +Y+ V ++L+ F
Sbjct: 4 ISEITGQTRLTGLLGSPVSHSKSPLMHNEAYRLLGLDYVYLCFDVPENNLQVAFEGLKKL 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ AGF+ P K + K DE+ P A+ I AVNT++ +GK +G+NTD I +++D
Sbjct: 64 NVAGFNCTMPDKTLMSKLVDELSPAAKIIGAVNTVVN--DNGKFVGHNTDGTGYIRSLQD 121
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV----IFDIDFERA 404
G + G+ L G+GGA ++ A GAR + I D + +A
Sbjct: 122 C-------------GHNIVGKKMTLLGSGGAASSICVQAALDGAREIDVLSIKDNFWSKA 168
Query: 405 KSLASDVMGAARPFEDILNFQPEK-------GAILANATPLGMHPNTDRVPVSEET-LRD 456
+ L SD+ +++ + IL NATP+GM PNTD V + + LR
Sbjct: 169 EKLVSDINDNTDCKVNLIEMNDDSIGESVFSSDILTNATPIGMAPNTDGCLVKDSSILRP 228
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+V D +Y P +T+L K A+ G + +G+ M L Q F L+TGKE P E ++
Sbjct: 229 ELIVSDIIYNPLETKLYKMAKEKGCSVFNGLYMLLYQGAEAFFLWTGKEMPTEEIK 284
>gi|423099141|ref|ZP_17086849.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|370794376|gb|EHN62151.1| putative shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 156/304 (51%), Gaps = 41/304 (13%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 289
+ I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 5 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 64
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD
Sbjct: 65 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDG---------- 112
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 405
G+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 113 ---LGFASNLRDSGVDMAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAK 169
Query: 406 -SLAS-------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE 451
++AS D+ AA+ E+I IL NAT +GMHP+ + PV +
Sbjct: 170 QTIASIKQEVPDCIVHIYDLNDAAKLHEEIATSD-----ILVNATLVGMHPHENETPVKD 224
Query: 452 ETL-RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 510
T+ R +V D VY P+KTRLL DAEAAG+ + G+ M L Q + LFTGK+ P
Sbjct: 225 TTVFRKDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMPVSE 284
Query: 511 MREI 514
++++
Sbjct: 285 VKDL 288
>gi|148643239|ref|YP_001273752.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
gi|166219474|sp|A5UMF6.1|AROE_METS3 RecName: Full=Shikimate dehydrogenase
gi|148552256|gb|ABQ87384.1| shikimate 5-dehydrogenase, AroE [Methanobrevibacter smithii ATCC
35061]
Length = 281
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 148/292 (50%), Gaps = 32/292 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VMK+ D++ P+A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDPIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 410
+ + + V+AGAGGA RA++F A+ + I + D +AKSLA D
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 411 VMGAARPFEDILNFQP--------EKGAILANATPLGMHPN-TDRVPVSEETLRDYQLVF 461
+ + D ++F IL + TP+GM P+ D V E + +V
Sbjct: 164 LKNSK--LTDNVDFDSIDKIVGYVSDADILIDTTPVGMSPHVNDEAIVKAEDMHSDLVVN 221
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D VY P +T LL +A AGA V G++M L Q F ++TG++AP + M +
Sbjct: 222 DIVYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|16801401|ref|NP_471669.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|16414861|emb|CAC97565.1| lin2338 [Listeria innocua Clip11262]
Length = 289
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 156/304 (51%), Gaps = 41/304 (13%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 289
+ I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD
Sbjct: 63 LRGSNVTMPCKSEVLKYMDELSPAARMIGAVNTIINE--DGKLTGHITDG---------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 405
G+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 111 ---LGFASNLRDSGVDVAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAK 167
Query: 406 -SLAS-------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE 451
++AS D+ AA+ E+I IL NAT +GMHP+ + PV +
Sbjct: 168 QTIASIKQEVPDCIVHIYDLNDAAKLHEEIATSD-----ILVNATLVGMHPHENETPVKD 222
Query: 452 ETL-RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEF 510
T+ R +V D VY P+KTRLL DAEAAG+ + G+ M L Q + LFTGK+ P
Sbjct: 223 TTVFRKDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMPVSE 282
Query: 511 MREI 514
++++
Sbjct: 283 VKDL 286
>gi|260892556|ref|YP_003238653.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
gi|260864697|gb|ACX51803.1| shikimate 5-dehydrogenase [Ammonifex degensii KC4]
Length = 297
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 27/293 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ +T++ G+ P+ H+ P +HN FR +N N IYVP +V ++L + + + +
Sbjct: 2 QIDGNTRIVGIFGDPIAHTLSPHMHNAAFRALNLNYIYVPFWVRREELAEATAAIRALNL 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AG +V P+KEA++ + DE+ A I AVNT++ + GKL G NTD + A++
Sbjct: 62 AGVNVTVPHKEAIIPYLDELEEEACLIGAVNTVVNQ--GGKLWGSNTDASGFLAALQ--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA-- 408
E G+ +P ++ VL G A A+S+ + F+ F+RA LA
Sbjct: 117 -EEGF--------APAKKKVAVLGAGGAARAVGVALARSQVEEITFFNRTFDRAAELAAY 167
Query: 409 ----SDVMGAARPFEDILNFQP----EKGAILANATPLGMHPNTDRVP-VSEETLRDYQL 459
+ V A P+E++ +F+ + ++ T LGMHP +P V+EE R QL
Sbjct: 168 LEERTGVRARALPWEEMGSFRGIEFLQAADLIVQTTSLGMHPREGEMPPVAEEAFRPGQL 227
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
V D VY P KTR L A+ GA SG+ M L Q F+L+TG AP E MR
Sbjct: 228 VIDLVYRPLKTRFLSLAQKRGAKTASGLGMLLYQGALAFSLWTGVPAPLEVMR 280
>gi|20093378|ref|NP_619453.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
gi|24211500|sp|Q8THC3.1|AROE_METAC RecName: Full=Shikimate dehydrogenase
gi|19918745|gb|AAM07933.1| shikimate 5-dehydrogenase [Methanosarcina acetivorans C2A]
Length = 280
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 146/293 (49%), Gaps = 35/293 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+VFG+ PVGHS P +HN F + + IY V ++L+K + F G ++
Sbjct: 3 RVFGVFGDPVGHSLSPAMHNSAFSALGMDCIYHAFRVRPENLRKAILGAEAMGFGGLNLT 62
Query: 297 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKER 353
P KE +K D + P LA+ I AVNT++ + G++ GYNTD + A+ E A++ R
Sbjct: 63 VPLKEEALKL-DFIRPDPLAERIGAVNTVVFSET-GEIRGYNTDGLGARQALLEAAVEIR 120
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
G K A G F LA + GA + + + ERA LA DV
Sbjct: 121 GSKVVVAGAGGAARAVAFQLA--------------ADGAEITVVNRTEERAVELAKDVAA 166
Query: 414 AARP----------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
A+ P +++L IL N T LGMHPNTD + E L VFD
Sbjct: 167 ASLPGKINGTGLSGLKELLR----DADILINTTTLGMHPNTDTTIATAEELHSGLTVFDI 222
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VY P +TRLLK+A+ AGA VSGV M + Q F L+TG EAP E M++ VL
Sbjct: 223 VYNPLETRLLKEAKVAGAKTVSGVLMLVYQGAEAFKLWTGVEAPAELMKKTVL 275
>gi|410668003|ref|YP_006920374.1| shikimate dehydrogenase [Thermacetogenium phaeum DSM 12270]
gi|409105750|gb|AFV11875.1| shikimate dehydrogenase AroE [Thermacetogenium phaeum DSM 12270]
Length = 301
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 145/292 (49%), Gaps = 24/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TKVF L PVGHS P++ N F + YVP+ V D L + +
Sbjct: 5 IGGQTKVFALYGDPVGHSLSPVMQNRAFAACGLDCCYVPLRVKRDGLATAVAAIRALGLG 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAI 350
G ++ P+KE+V+K+ DEV A+ I AVN ++RR + +L GYNTD + ++ E+A
Sbjct: 65 GVNITIPHKESVLKYLDEVDREAELIGAVNAVVRR--ENRLCGYNTDAAGFLRSLREEAG 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 410
E K A + GGA + + + D RA++LA+D
Sbjct: 123 FEATGKKAVVLGAGGAARAVAFALAIGGA------------VSLSVINRDPGRARTLAAD 170
Query: 411 V------MGAARPFEDILNFQPEKGA-ILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
+ AA F D L + KGA ++ NATP+GM P+ P+ E L LV D
Sbjct: 171 LERKTGCCTAAGSFHDGLLEEALKGADLVVNATPVGMFPDCHSSPIPAEKLPPGILVCDL 230
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
VY P +T+LL DA AAG +++GV M + Q F L+TG EAP MRE V
Sbjct: 231 VYNPIRTKLLADAAAAGCRVLNGVGMLVAQGALAFELWTGIEAPVAAMREAV 282
>gi|325958381|ref|YP_004289847.1| shikimate dehydrogenase [Methanobacterium sp. AL-21]
gi|325329813|gb|ADZ08875.1| Shikimate dehydrogenase [Methanobacterium sp. AL-21]
Length = 286
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 26/296 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T VFG+I PV HS P +HN F+ + + IYVP V + L+ S
Sbjct: 2 ITGKTNVFGIIGDPVEHSLSPGMHNAAFKELGMDNIYVPFQVKAEHLEDAILGAQSLGVK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K V+ + D + A I AVNTI +G+NTD ++ AIE+
Sbjct: 62 GFNVTIPHKTEVINYLDYLDIAAGLIGAVNTI--EFGKNGAVGHNTDGIGAVMAIEEV-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
+P+ + V+ GAGGA RA+AF G +VI + E+A L +D
Sbjct: 118 ------------TPVKNKKVVILGAGGASRAIAFQLLLSGVDNLVIANRTVEKAGELKTD 165
Query: 411 VMGA------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQLVFDA 463
++ ++ L + AIL N TP+GM+PN D PV + E + +V D
Sbjct: 166 LVEKLDHEVRVSGLDENLTQELSDTAILINTTPVGMYPNVDEKPVVTAEMMHPDMVVNDI 225
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
VY P KT LL +A+ AGA +SG++M + Q + F ++TG E P E + ++ +
Sbjct: 226 VYNPLKTGLLNEADKAGAKSISGIKMLMYQGVEAFKIWTGIEPPVEIFQRALMNEL 281
>gi|398818042|ref|ZP_10576641.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
gi|398028840|gb|EJL22343.1| shikimate 5-dehydrogenase [Brevibacillus sp. BC25]
Length = 283
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 152/295 (51%), Gaps = 26/295 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I + TK+ GL PV HS+ P++HN F Y V+ +L+ + +
Sbjct: 2 ITSKTKLVGLFGHPVSHSQSPMMHNTAFSETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K A+M DE+ PLA+ I AVNT++ R DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSL---VE 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
E G L ++ + GAGGA RA+AF +G R + I + ERA LA
Sbjct: 117 ETGIV---------LEKQVVTMVGAGGAARAVAFTLAEQGVREIRIINRSRERAAVLAEH 167
Query: 411 VMGAARPFEDILNFQPEKGA------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
V G P + + Q E A +L N T +GM PN PV E L V D +
Sbjct: 168 V-GTIVPTKIV--EQGEGAAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLI 224
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +TRLLK+A A GA + SG+ MF+ Q F L+TG+ AP MRE+VL +
Sbjct: 225 YNPLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGERAPTGVMREVVLQQL 279
>gi|226311576|ref|YP_002771470.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|254806733|sp|C0ZB07.1|AROE_BREBN RecName: Full=Shikimate dehydrogenase
gi|226094524|dbj|BAH42966.1| shikimate 5-dehydrogenase [Brevibacillus brevis NBRC 100599]
Length = 283
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 22/293 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I + T++ GL PV HS+ P++HN F Y V+ +L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNTAFLETGLGFAYAAFDVEPENLEDAVAGIRALGLK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K A+M DE+ PLA+ I AVNT++ R DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSL---VE 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
E G L ++ + GAGGA RA+AF +G + + I + ERA LA
Sbjct: 117 ETGIV---------LEKQVVTMVGAGGAARAVAFTLAEQGVKEIRIINRSRERAAVLAEH 167
Query: 411 VMGAARPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
V G P + + + E ++L N T +GM PN PV E L V D +Y
Sbjct: 168 V-GMIVPTKIVEQGEGEAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLIYN 226
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLLK+A A GA + SG+ MF+ Q F L+TG++AP MRE+VL +
Sbjct: 227 PLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGEQAPTGVMREVVLQQL 279
>gi|334137627|ref|ZP_08511056.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
gi|333604791|gb|EGL16176.1| shikimate dehydrogenase [Paenibacillus sp. HGF7]
Length = 289
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 153/295 (51%), Gaps = 24/295 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++G+ PV HS+ PI+ N F NG Y V + L++ + + F
Sbjct: 7 LDSGTILYGVFGDPVRHSRSPIMMNRAFGEAGINGAYAAFHVLPEQLEEAVAGIRALGFG 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VMK+ DE+ AQA+ AVNT++ R GKLIGYNTD + ++++
Sbjct: 67 GVNVTIPHKVNVMKYLDEIDADAQALGAVNTVVNR--GGKLIGYNTDGIGYVRSLKE--- 121
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 410
G L G+ +L GAGGA R +++ AK + + I + E+A+ LAS
Sbjct: 122 ---------ETGMDLRGKKVLLIGAGGAARGISYALAKEGPSFIAIANRTAEKAQELAST 172
Query: 411 VMGAARP----FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE--TLRDYQLVFDAV 464
V ++ N + I+ N+T GM+PN + +P+ + LR+ +V D V
Sbjct: 173 VRAETSAVGMGLHELGNIISDADLII-NSTSSGMYPNIEEMPLDLDGHRLREGAVVSDLV 231
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +TR LK+A+A GA+ G+ MF+ Q F +TG AP MR+ V F
Sbjct: 232 YNPLETRFLKEAKARGAVTHGGLGMFIYQGAYAFEYWTGVPAPAAAMRQAVEQSF 286
>gi|389853036|ref|YP_006355270.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
gi|388250342|gb|AFK23195.1| shikimate 5-dehydrogenase [Pyrococcus sp. ST04]
Length = 273
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 150/286 (52%), Gaps = 23/286 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDFA 291
+N +TKV+ +I KPV HS P++HN F+ N +YV +F + L+ + A
Sbjct: 1 MNGETKVYAVIGKPVRHSLSPVMHNALFKKYGINAVYVAFEVFPEQLRDAILGVRALGIA 60
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++++ D+V P ++AI++VNT+I S+G+LIGY TD + A+E
Sbjct: 61 GLNVTMPHKEKIIEYLDKVSPDSKAISSVNTVIN--SNGELIGYTTDGTGARKALE---- 114
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-D 410
F + R+ +L G AK + VV+ + E+A++L
Sbjct: 115 ---------RFTNVEGSRVLILGAGGAGKAIAYELAKY--SDVVVLNRTPEKARALEKFG 163
Query: 411 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ G A E+ L++ E IL NAT +GM VP +E LR+ +V D VY P KT
Sbjct: 164 IKGDALTMEN-LSYYIEWADILINATSVGMGKYESLVP--KELLREGLVVMDIVYKPIKT 220
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+LLKDAE AG + V G+ M + Q F L+TG E MR + L
Sbjct: 221 KLLKDAEKAGCLTVDGLWMLVYQGAESFKLWTGIHPDVELMRRVAL 266
>gi|330444737|ref|YP_004377724.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
gi|328807847|gb|AEB42020.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pecorum E58]
Length = 480
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 216/498 (43%), Gaps = 54/498 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
++CA P +Q+ +Q+L ++ D +E+R+D ++ P L +L P+
Sbjct: 4 LLCATINGPTFSQAKQQILDSL-----PFVDSIELRVDSLSTLSPSA-LSFLLAMAKAPI 57
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L +P+ GL +++ +L L Y+D +++ + L K S+
Sbjct: 58 LTYKKPQ---GLSSSAWVEKILSL---AALSPTYLDVDIQFPQDALRKIRLSYPD----- 106
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+ L T + ED ++ +M +T A K+V + R A
Sbjct: 107 IKIILSHHTETYEDPHHIYHKMHSTPAHYYKIVTYSETPLQTLRFVHAARSLPPQATALC 166
Query: 188 VGERGLVSQLLSPKFNGALVY--GSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLIS 245
+GE L S++LSP A+ Y G G P ++ L Y ++++ + +++ LI
Sbjct: 167 LGEHSLASRVLSPLMGNAMNYAAGRHASPAAPGQPHLDDLL-AYNYKNLSQEAEIYALIG 225
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
PV S I HN F + Y+ P+ + L +FF + F G SV P K V
Sbjct: 226 NPVDRSPSHITHNKFFSKLLIKASYIKIPLSPEQLTEFFIILRTLPFRGLSVTMPLKVPV 285
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
M + D + P AQ AVNTI+ + L GYNTD + + + + G A
Sbjct: 286 MDYMDILDPSAQLCGAVNTILFH--EDVLYGYNTDGQGAFNLL--------VRKGVA--- 332
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
+ + + GAGGA R+LA GA + IF+ F+ A+SLA G A P +D+
Sbjct: 333 --IKNKHVAILGAGGAARSLAVTLAHHGAYIHIFNRTFQNAESLAKLCNGTAHPLKDLRG 390
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F + +L N P + + P+ + D P+ T L A+ G +
Sbjct: 391 FASD---LLINTLPPEIGFPWEFPPI----------ILDINTFPKNTPYLLKAQQLGVRV 437
Query: 484 VSGVEMFLRQAIGQFNLF 501
G EMF+ QA+ QF+L+
Sbjct: 438 FHGYEMFIEQALLQFSLW 455
>gi|18978065|ref|NP_579422.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|397652658|ref|YP_006493239.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
gi|24211503|sp|Q8U0A6.1|AROE_PYRFU RecName: Full=Shikimate dehydrogenase
gi|18893854|gb|AAL81817.1| shikimate 5-dehydrogenase [Pyrococcus furiosus DSM 3638]
gi|393190249|gb|AFN04947.1| shikimate 5-dehydrogenase [Pyrococcus furiosus COM1]
Length = 271
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 137/285 (48%), Gaps = 22/285 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD-DLKKFFSTYSSPDFAG 292
IN +TK++G+I PV HS PI+HN F+ N IYVP V DLK + + D G
Sbjct: 2 INGETKIYGIIGNPVKHSLSPIMHNALFKKFGINAIYVPFEVKKDLKNAINGVKALDIQG 61
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V PYKE V+KF DE+ +Q I +VNT++ +GKL+GY TD + A+E
Sbjct: 62 VNVTMPYKEEVIKFLDELSEDSQNIGSVNTVVNL--EGKLVGYTTDGIGARRALE----- 114
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 412
F + +L S+ A VV+ + E+AK L
Sbjct: 115 --------RFTQVDGANILILGAG--GAGKAIAYELSKVANVVVLNRTIEKAKRLEK--F 162
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
G + L + E IL NAT +GM+ VP + LR +V D VY P T L
Sbjct: 163 GIVGDSLEALPYYVEWADILINATSVGMNEEKSLVP--KNLLRPGLVVMDIVYKPLNTLL 220
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
L+ A+ G I + G+ M + Q F L+TG+E E MR + LA
Sbjct: 221 LRYAQEKGCIAIDGLWMLVYQGAESFRLWTGEEGDVELMRRVALA 265
>gi|325570234|ref|ZP_08146100.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
gi|325156717|gb|EGC68891.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
Length = 292
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 149/299 (49%), Gaps = 30/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 6 QMITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLD 65
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 66 LLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED- 122
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDF 401
+ G+ + GAGGA A+ A G + + + I
Sbjct: 123 ------------IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTIRVFNRKDEFYPIIQ 170
Query: 402 ER----AKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 456
E+ A+ AS++ + L ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 171 EKLTQIAEKTASEITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRE 230
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y PR+T+LLKDA+A GA +G+ M L Q F L+TG+E P E ++ ++
Sbjct: 231 SLAVYDIIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFKLWTGQEMPVEKVKALI 289
>gi|312137431|ref|YP_004004768.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
gi|311225150|gb|ADP78006.1| shikimate dehydrogenase [Methanothermus fervidus DSM 2088]
Length = 281
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TKV G+I PV HS P++HN F + + +YVP V ++LK + +
Sbjct: 2 ITGKTKVVGVIGDPVEHSLSPVMHNAAFEYYGLDYVYVPFHVKKENLKDAIKGSKALNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K V+K+ D + A+ I A+NTI + D + G+NTD + ++ A+++ +
Sbjct: 62 GLNVTIPHKRNVIKYLDWIDDAAKLIGAINTI--KFEDDGIKGFNTDGKGAVMALKEVTE 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ K G F LA G + I + E+A+ LA D+
Sbjct: 120 IKNKKILILGAGGAARAVAFQLALEGAK-------------NICILNRTVEKAEELAKDI 166
Query: 412 -----MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 465
+ +++ + + IL +ATP+GM+PN ++ P V E + + +V D VY
Sbjct: 167 NKKTGVKTNSGSLELIEKEIKDTDILIDATPVGMYPNVNQEPLVKAEMMHENLIVNDLVY 226
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P KT LLK+AE AGA +SGVEM + Q F ++TG EAP + MR+ VL +
Sbjct: 227 NPIKTTLLKEAEKAGAKTISGVEMLVYQGAEAFKIWTGMEAPIDVMRQSVLKEL 280
>gi|386044549|ref|YP_005963354.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404411543|ref|YP_006697131.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|345537783|gb|AEO07223.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|404231369|emb|CBY52773.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC5850]
Length = 289
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 151/301 (50%), Gaps = 37/301 (12%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSS 287
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 4 RISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF-- 61
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I +
Sbjct: 62 -NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLR 118
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FER 403
DA + G+ + GAGGA A+ GA+ + IF+I +++
Sbjct: 119 DA-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDK 165
Query: 404 AK----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL 454
AK S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 166 AKQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSV 225
Query: 455 -RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R+
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRD 285
Query: 514 I 514
+
Sbjct: 286 L 286
>gi|284802683|ref|YP_003414548.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284995825|ref|YP_003417593.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404414320|ref|YP_006699907.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|284058245|gb|ADB69186.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284061292|gb|ADB72231.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|404240019|emb|CBY61420.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC7179]
Length = 289
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 152/301 (50%), Gaps = 37/301 (12%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSS 287
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 4 RISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTF-- 61
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I +
Sbjct: 62 -NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLR 118
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FER 403
DA +AG+ + GAGGA A+ GA+ + IF+I +++
Sbjct: 119 DA-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDK 165
Query: 404 AK----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL 454
AK S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 166 AKQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSV 225
Query: 455 -RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +++
Sbjct: 226 FRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKD 285
Query: 514 I 514
+
Sbjct: 286 L 286
>gi|422416778|ref|ZP_16493735.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
gi|313622721|gb|EFR93071.1| shikimate dehydrogenase [Listeria innocua FSL J1-023]
Length = 289
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 152/299 (50%), Gaps = 31/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 289
+ I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 3 KRISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVSKVADAIAAIKTFN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG---------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 405
G+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 111 ---LGFASNLRDSGVDVAGKKMTIIGAGGAATAIQVQCALDGAQEITIFNIKDDFYEKAK 167
Query: 406 -SLAS------DVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL-R 455
++AS D + D E IL NAT +GMHP+ + PV + T+ R
Sbjct: 168 QTIASIKQEVPDCIVHIYDLNDTAKLHEEIATSDILVNATLVGMHPHENETPVKDTTVFR 227
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KTRLL DAEAAG+ V G+ M L Q + LFTGK+ P ++++
Sbjct: 228 KDLIVTDVVYNPKKTRLLLDAEAAGSKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|393233433|gb|EJD41005.1| Pentafunctional AroM protein [Auricularia delicata TFB-10046 SS5]
Length = 1557
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 228/501 (45%), Gaps = 41/501 (8%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
GAD VE+R+D + + + + ++ LP++ R K GG + ++ K L+ +
Sbjct: 1075 GADAVELRVDLLASTDHAYVREQVALLRGATSLPIVYTVRTKAQGGAFPDEKTKEALDLI 1134
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSR--M 149
L L +Y+D EL + + G G +++ D D + ++ +
Sbjct: 1135 ELGRRLACEYLDVELSLP--VAGVDTLVKNKGKSKVIASWHDWSGKMRWDGPDVKAKYAL 1192
Query: 150 QATGADIIKLVFSVNDITE---IARIFQLLSH-CQVPIIAYSVGERGLVSQLLSPKFNGA 205
A DI+K+V + N I + + R +S + P++A ++G G +S++L+P +
Sbjct: 1193 AAAFGDIVKIVGAANSIQDNFALRRFVDSVSGPGRPPVLAINMGAAGQMSRILNPVLS-P 1251
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKPVGHSKGPILHNPTFRH 263
+ + L P P S+ Q + H+ + F L P+ S P LHN F+
Sbjct: 1252 VTHPLL---PTRAAPGQLSVAQIQQALHLLGLLPARQFFLFGTPISKSMSPTLHNTGFKE 1308
Query: 264 VNYNGIYVPMFVDDLKKFF-STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
+ Y + ++ + + F G SV P+K A++ D V P AQAI AVNT
Sbjct: 1309 LGLPHTYGLLETAEVDETIRAALKDNAFGGASVTIPHKLAIIPLLDAVSPHAQAIGAVNT 1368
Query: 323 IIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMF-VLAGAGGAGR 381
+IR+ +DG L G NTD ++ A G+P G + GAGG R
Sbjct: 1369 VIRQ-ADGSLYGDNTD----------------WRGIVACVGTPPQGEWTGCVLGAGGTAR 1411
Query: 382 ALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGM 440
A + K+ GA RV + + A SLA+ +G ++ + A++ + P
Sbjct: 1412 AAVYALKALGASRVWVVNRTRANADSLAA-ALGPGVHAANVADLASAPPAVIVSTVPAAG 1470
Query: 441 HPNTDRVPVSEETLR-DYQLVFDAVYTPRKTRLLKDAEA-AGAIIVSGVEMFLRQAIGQF 498
+ + E R + +V D Y P +T LLK A+A AG +V G+E+ L Q QF
Sbjct: 1471 TESAAWLKARELFARAEGGVVVDMAYAPLETPLLKLAKAQAGWRVVPGIEVLLEQGYCQF 1530
Query: 499 NLFTGKEAPKEFMREIVLAKF 519
L+TG+ APK +RE VL +
Sbjct: 1531 ELWTGRRAPKGVVRETVLNAY 1551
>gi|254826875|ref|ZP_05231562.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258599255|gb|EEW12580.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 289
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 152/300 (50%), Gaps = 37/300 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 288
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF--- 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 405 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTG++ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 286
>gi|239827796|ref|YP_002950420.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
gi|259585283|sp|C5D4W2.1|AROE_GEOSW RecName: Full=Shikimate dehydrogenase
gi|239808089|gb|ACS25154.1| shikimate 5-dehydrogenase [Geobacillus sp. WCH70]
Length = 277
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++ L PV HS PI+HN F+++N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPIMHNDAFQNMNIAAHYHAFHVEPERLKDAIAGVRALGISGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM DEV P A+ I AVNTI+ R +G+LIGYNTD + A+E+ I
Sbjct: 63 IPHKTAVMPLLDEVDPTARRIGAVNTIVNR--NGRLIGYNTDGPGYVRALEEEIN----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
+ + +L GAGGA R + RGA+ + I + +AK L + +
Sbjct: 116 -------VDIKEKRILLIGAGGAARGIYVSLADRGAKQIDICNRTVSKAKQLIDECNASV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
LN E+ IL N T +GM+PN + +P+S +++ +V D +Y P +T+
Sbjct: 169 SSVVYSLNEAEERLGEYDILINTTSVGMYPNMEEMPLSLANMKEETIVSDIIYNPLETKW 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+A II +GV MF+ Q F +TG + M++IV+ +
Sbjct: 229 LKEARKRNGIIQNGVGMFVYQGALAFEKWTGIFPDVQRMKKIVIEQL 275
>gi|452975134|gb|EME74953.1| shikimate 5-dehydrogenase [Bacillus sonorensis L12]
Length = 278
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++GLI PV HS P +HN + ++ +G Y V DDL+ + GF+V
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLDGYYHAFRVENDDLEDAVKGMRALGIQGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+MK+ D + A+ + AVNT+ R + L+GYNTD E + +++
Sbjct: 64 PHKVAIMKYLDRIDESARVLGAVNTVRREKEE--LVGYNTDGEGFLKSLK---------- 111
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
S P++ ++ GAGGA RA+ A R R+ + + E+A++ G +
Sbjct: 112 --PSLDKPVSELSILIIGAGGAARAIFTTLASERPKRLDVANRTPEKAEAFIQLYSGQTK 169
Query: 417 PF-----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
E+ L E +L T +GMHP+ D VP+S ++ LV D +Y P KT
Sbjct: 170 AVSLAEAEEHL----EAYDVLIQTTSVGMHPHVDDVPLSLARAKETCLVCDIIYNPLKTA 225
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LLK+AEA G ++GV MF+ QA F L+TG E E M+ IVL K
Sbjct: 226 LLKEAEAKGLHTLNGVGMFIGQAALSFGLWTGHEPDMEKMKSIVLRKL 273
>gi|290893185|ref|ZP_06556173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404408677|ref|YP_006691392.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|290557347|gb|EFD90873.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|404242826|emb|CBY64226.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2376]
Length = 289
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 150/300 (50%), Gaps = 37/300 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 288
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTF--- 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 405 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
K S+ +V D+ LN + IL NAT +GMHPN P+S ++
Sbjct: 167 KQTVASIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISNTSVF 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R++
Sbjct: 227 RKELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|150388897|ref|YP_001318946.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
gi|166988267|sp|A6TM69.1|AROE_ALKMQ RecName: Full=Shikimate dehydrogenase
gi|149948759|gb|ABR47287.1| shikimate 5-dehydrogenase [Alkaliphilus metalliredigens QYMF]
Length = 286
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 156/297 (52%), Gaps = 27/297 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ GL+ PV HS P++HN F+H+ + +Y+ V D+LK+ + D A
Sbjct: 5 ISGYTRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVA 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K+ ++ DE+ A+ I +VNT++ + +G L GYNTD
Sbjct: 65 GFNVTMPNKQKIIPLLDEISEEARLIGSVNTVVNK--NGHLKGYNTDG------------ 110
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
+GY G A G G+ V+AGAGGA +++A GA+ + I + E A+ + +
Sbjct: 111 -KGYVMGLADEGISPEGKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNI 169
Query: 411 V-------MGAARPFEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVF 461
+ +A +ED L Q ++ + N T LGM + ++ +S + L +V
Sbjct: 170 INKNIPTCKTSATGYEDNELKQQLKEADLFINCTNLGMGSHEEKSIISSTDILHPDLIVS 229
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
D VY P KT+LL AE G ++G+ M + Q F L+TG++ P E+++ I+L+K
Sbjct: 230 DVVYAPPKTKLLHMAEEVGCKTINGLGMIIGQGALAFKLWTGEDMPIEYIKRIILSK 286
>gi|402300002|ref|ZP_10819555.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
gi|401724793|gb|EJS98122.1| shikimate 5-dehydrogenase [Bacillus alcalophilus ATCC 27647]
Length = 282
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 144/291 (49%), Gaps = 28/291 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
KV+GL PVGHS PI+H F+ + Y V D +++ + + G +V
Sbjct: 3 KVYGLFGYPVGHSMSPIMHEAAFKELGQKANYHAFNVKPDKIEEAVMAIRALELGGCNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K VM + DE+ P A I AVNTI+ + GKL G+NTD RGY
Sbjct: 63 IPHKVNVMNYLDEIDPEAAEIGAVNTIVNQ--GGKLKGFNTDG-------------RGYL 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDID-------FERAKSLA 408
L G+ + GAGGA RA+ +R+V+ + ER KS A
Sbjct: 108 QSLLEIAHTLEGKSVAIIGAGGAARAIVTVLVHESVSRLVVANRTKIKAEQLIERHKSKA 167
Query: 409 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
++ +G E L ++ I+ N T +GM PNTD P+S L+ +V D +Y P
Sbjct: 168 TE-LGVMDMRE--LEYELASFDIIINTTSVGMSPNTDECPLSLNNLKKETIVSDLIYNPL 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
KT+LL +AE+ GA +++GV MF+ Q F +TG + ++ M +IVL +
Sbjct: 225 KTKLLIEAESRGAKVLNGVGMFVNQGALSFEYWTGLKPDRKVMTKIVLEQL 275
>gi|17229549|ref|NP_486097.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
gi|24211460|sp|Q8YVC1.1|AROE_ANASP RecName: Full=Shikimate dehydrogenase
gi|17131148|dbj|BAB73756.1| shikimate 5-dehydrogenase [Nostoc sp. PCC 7120]
Length = 289
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 29/297 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLSEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
R + A V+ G GGA RA+ G G A + + + +R +
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 411 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 460
+ ++ + P+ +L N TP+GM+P D P+S E L + Q +
Sbjct: 168 WENSPIAENLQVHTWDYLAKLIPQAN-LLVNTTPIGMYPQVDESPLSAEELVNLQTGTIA 226
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVL 516
+D +Y P+ T+ L+ A+ GAII+ G+EM ++Q + ++ + + P + MR+ ++
Sbjct: 227 YDLIYIPKPTQFLQKAQQQGAIIIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQALI 283
>gi|441472052|emb|CCQ21807.1| Shikimate dehydrogenase [Listeria monocytogenes]
gi|441475188|emb|CCQ24942.1| Shikimate dehydrogenase [Listeria monocytogenes N53-1]
Length = 283
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 33/295 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I+ T++ GLI PV HSK PI++N +F+ + Y+ +K + + G
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTIKAI----KTFNLRGA 60
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
+V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + DA +
Sbjct: 61 NVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDASVD- 117
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK---- 405
+AG+ + GAGGA A+ GA+ + IF+I +++AK
Sbjct: 118 ------------VAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTAA 165
Query: 406 SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDYQL 459
S+ +V D+ LN + IL NAT +GMHPN P+S+ ++ R +
Sbjct: 166 SIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELI 225
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTG++ P ++++
Sbjct: 226 VADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 280
>gi|430750627|ref|YP_007213535.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
gi|430734592|gb|AGA58537.1| shikimate 5-dehydrogenase [Thermobacillus composti KWC4]
Length = 294
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 27/304 (8%)
Query: 225 LRQTYKVEH---INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLK 279
+ QT E I++ T ++G+I P+ HSK P++ + FR N +Y+ V + L
Sbjct: 1 MNQTTAAEAGPAIDSHTVLYGVIGDPIRHSKSPVMLSRAFRETGVNAVYLAFHVTAERLA 60
Query: 280 KFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDC 339
F + GF+V P+K A+M DE+ P A+A AVNT++RR + KLIGYNTD
Sbjct: 61 AFAEGARAMGMGGFNVTIPHKTAIMAHLDEIDPTAEAAGAVNTVVRR--EDKLIGYNTDG 118
Query: 340 EASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFD 398
+ ++++ G+ L+GR V+ GAGGA R + A + A + + +
Sbjct: 119 IGYVRSLKE------------EAGAELSGRRIVVLGAGGAARGILHALALEKPAHIAVVN 166
Query: 399 ----IDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP--VSEE 452
A++L +DV AA +D+ + I+ N T GM PNTD +P +
Sbjct: 167 RTAARAEALAQALPADVPKAALGPDDLREACADAD-IVINTTSAGMSPNTDELPLGIDAS 225
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
++ + D VY P +TR L++AE AG G+ MF+ Q F +TG+ AP MR
Sbjct: 226 WMKPGAVASDIVYNPMRTRFLEEAERAGCRTHGGLGMFIYQGAYAFEYWTGQAAPVAAMR 285
Query: 513 EIVL 516
E V+
Sbjct: 286 ETVI 289
>gi|428207318|ref|YP_007091671.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
gi|428009239|gb|AFY87802.1| shikimate dehydrogenase [Chroococcidiopsis thermalis PCC 7203]
Length = 294
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P +HN H+ + +Y+P+ V +DL +++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPAMHNAAIAHLGLDYVYLPLPVKPEDLAAALQGFAAIGLV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ F EV P+AQA+ AVNT+ R +D G NTD E + + ++
Sbjct: 62 GFNATIPHKQAILPFLSEVSPVAQAVGAVNTVWR--TDEGWAGTNTDVEGFLAPL---LE 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVI----------FDID 400
+ K+ + SP + ++ V+ G GGA RA+ G G A + + F
Sbjct: 117 KSKVKSQKSKIDSPDSPQIAVILGNGGAARAVVAGCSQLGCAEICVVGRNEVKLQEFYTS 176
Query: 401 FERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS---EETLRDY 457
+ ++ A+ + D++ + +L N TP+GM+P+ DR P+S L+
Sbjct: 177 WSNSQVQANLQVYTWDKLPDLI----ARADLLVNTTPIGMYPHVDRSPLSLSEMAVLKQG 232
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+ +D +YTPR T L+ A+ GA + G+EM ++Q ++ + P E MR+
Sbjct: 233 AIAYDLIYTPRPTLFLQQAQQQGARTIDGLEMLVQQGAAALKIWLQQPVPVEIMRQ 288
>gi|451822103|ref|YP_007458304.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788082|gb|AGF59050.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 289
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 145/299 (48%), Gaps = 31/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK--KFFSTYSSPD 289
+ I+ T ++ LI PV HS P ++N +F+ + + YV + + K + + + +
Sbjct: 3 KRISGSTALYCLIGSPVDHSGSPAMYNYSFQKLGIDSAYVAFDISEEKVSDAIAAFKTLN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ DE+ P A+ I AVNTII + GKL G+ TD
Sbjct: 63 IRGANVTMPCKSEVVKYMDELSPAARIIGAVNTIINK--SGKLTGHITD----------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDID-------- 400
G+ G + G++ + GAGGA A+ GA+ + IF+I
Sbjct: 110 --GVGFVRNLKEHGVDIKGKIITVLGAGGAATAIVVQCALDGAKEINIFNIKDAFYQKAE 167
Query: 401 --FERAKSLASDVMGAARPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD 456
E K + + ED LN Q IL NAT +GMHPN + P+ + +
Sbjct: 168 KTIENIKKEVPECVVNLCDLEDTQKLNGQIAASDILVNATRVGMHPNEEESPIKDTNVFT 227
Query: 457 YQLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+LV D VY PRKT+LL+DAEA G IV G+ M L Q F L+TG E P + + E+
Sbjct: 228 KELVVADVVYNPRKTKLLEDAEAVGCTIVPGIGMLLWQGAEAFKLYTGLEMPADEVNEL 286
>gi|406664822|ref|ZP_11072597.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
gi|405387670|gb|EKB47094.1| Shikimate dehydrogenase [Bacillus isronensis B3W22]
Length = 299
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 155/305 (50%), Gaps = 36/305 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA 291
I+ TK+ GL++ P+GHS P +HN + + +NY + + ++L++ + + A
Sbjct: 9 IDGKTKLVGLLATPIGHSLSPRMHNLGYSLKGLNYAYLAFEVGNEELEETVKGFKAAGVA 68
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K V+ + DE+ A+ A NT++ R DGKLIGYNTD
Sbjct: 69 GFNVSMPNKMKVLDYLDELDDSAKYSRASNTVVNR--DGKLIGYNTDG------------ 114
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKSL 407
GY G L G+ L G+GGA +A G R + IF D F +A+
Sbjct: 115 -LGYIRNLIEHGVELKGQKVTLVGSGGAATPIAIQFAQSGIREISIFARNDQFFGQAEEN 173
Query: 408 ASDVMGAAR---------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL-- 454
+ + + P ED +F+ E + AILAN T LGM P D + + +ETL
Sbjct: 174 VNYINNEMKEFGVKANIFPLEDKESFRREVAESAILANGTSLGMKP-LDHLSIVDETLDV 232
Query: 455 -RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
R +V D VY P+K++LL AE AG +++G+ M L Q F LFTG++ P E ++E
Sbjct: 233 LRKDLVVTDVVYNPQKSKLLTQAEEAGCTVINGLGMMLWQGALGFKLFTGEDMPIEEIKE 292
Query: 514 IVLAK 518
I+ +
Sbjct: 293 IMFGE 297
>gi|334341634|ref|YP_004546614.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
gi|334092988|gb|AEG61328.1| shikimate 5-dehydrogenase [Desulfotomaculum ruminis DSM 2154]
Length = 293
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 148/293 (50%), Gaps = 23/293 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+N TK+ GL PV HS P +HN F + N +YVP + D LK+ + +S
Sbjct: 6 LNGKTKICGLFGFPVEHSFSPAMHNAAFEELGLNWVYVPFCISPDRLKQAMQSITSLGLT 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K+AV+ DE+HP A I AVNTI+ G+L+G+NTD + ++ D
Sbjct: 66 GINVTVPHKQAVLPLLDEIHPTAGIIGAVNTIVN--DQGRLVGHNTDGAGFVKSLTD--- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD- 410
E G+ SP + +L G A A S + I + +A++LA D
Sbjct: 121 ETGF--------SPRGQGVLILGAGGAARAVAVQLALSGAGPLYIANRSPAKAEALARDL 172
Query: 411 -----VMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 463
V AA P+ ++ + + ++ TP+GM P ++ P + +R Q+V D
Sbjct: 173 QQATGVRAAALPWGRELPQEKVNEVGLVVQTTPMGMAPKAEQCPDFPFQAIRTGQVVCDL 232
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+Y P +T LK+A GA+ ++G+ M L Q + F L+TGK AP MRE +L
Sbjct: 233 IYNPGQTLFLKEAAVRGAVPLNGLGMLLYQGVLAFELWTGKTAPVAVMREALL 285
>gi|386054491|ref|YP_005972049.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346647142|gb|AEO39767.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 289
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 151/300 (50%), Gaps = 37/300 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 288
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF--- 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
A + G+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 405 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|300087348|ref|YP_003757870.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527081|gb|ADJ25549.1| shikimate 5-dehydrogenase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 276
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 18/268 (6%)
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
PV HS P +HN + + +Y+ V L + + G ++ P+K A +
Sbjct: 15 PVAHSVSPAMHNAAIDRLGLDYVYLAFRVTPAGLAGALNGVRALGIRGVNLTIPHKTAAL 74
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
DEV A+ + AVNT++ G+L GYNTD I A+K+ G+ +
Sbjct: 75 GLLDEVDEAARRVGAVNTVVN--DAGRLTGYNTD----IAGFLAALKKHGF--------A 120
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA-RPFEDILN 423
P AG+ V+ GAGGA RA+ F + GA VVI + E+A +LA+D A E L
Sbjct: 121 P-AGQKAVVLGAGGAARAVVFALRDAGAEVVIANRSIEKADTLAADTGATAVSTTETELQ 179
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
+ +L NATP+G+ P+T PV L VFD +Y PR+TRLL +AEAAG +
Sbjct: 180 KALDGAGLLVNATPVGLFPDTGVTPVPGSLLHPGLTVFDTIYRPRRTRLLTEAEAAGCRV 239
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
+ G++M + Q F L+TG+ + M
Sbjct: 240 IDGLDMLVEQGATAFELWTGQSPDRAVM 267
>gi|16804275|ref|NP_465760.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|386051212|ref|YP_005969203.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404284734|ref|YP_006685631.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|405759288|ref|YP_006688564.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|16411706|emb|CAD00314.1| lmo2236 [Listeria monocytogenes EGD-e]
gi|346425058|gb|AEO26583.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|404234236|emb|CBY55639.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2372]
gi|404237170|emb|CBY58572.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2479]
Length = 289
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 37/300 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 288
I+ T++ GLI P+ HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTF--- 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 405 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|47096854|ref|ZP_00234434.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|254912797|ref|ZP_05262809.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937124|ref|ZP_05268821.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386047892|ref|YP_005966224.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47014773|gb|EAL05726.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str.
1/2a F6854]
gi|258609726|gb|EEW22334.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293590792|gb|EFF99126.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534883|gb|AEO04324.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 289
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 151/300 (50%), Gaps = 37/300 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 288
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNHSFQKAGLDYAYLAFDTPTEKVTDAIKAIKTF--- 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K V+K+ D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
A +AG+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 405 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D +Y P+KT+LL D+E AG V G+ M L Q + LFTGK+ P ++++
Sbjct: 227 RKELIVADIIYNPKKTQLLLDSEVAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 286
>gi|315283346|ref|ZP_07871557.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
gi|313612994|gb|EFR86925.1| shikimate dehydrogenase [Listeria marthii FSL S4-120]
Length = 289
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 153/297 (51%), Gaps = 31/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF--VDDLKKFFSTYSSPDFA 291
I+ T++ GLI P+ HSK P+++N +F+ + Y+ ++ + S + +
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPVMYNYSFQKAGLDYAYLAFDTPIEKVADAISAIKTFNLR 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K V+K+ D++ P A+ I AVNTI+ +GKL G+ TD + + DA
Sbjct: 65 GSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVANLRDAHV 122
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
+ +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 123 D-------------VAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAKQT 169
Query: 406 --SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDY 457
S+ +V D+ LN + IL NAT +GMHPN P++ ++ R
Sbjct: 170 ITSIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPINNTSVFRKE 229
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT+LL DAEAAG IV G+ M L Q + LFTG++ P ++++
Sbjct: 230 LIVTDIVYNPKKTKLLLDAEAAGCKIVGGLGMLLWQGAEAYKLFTGEDMPVSEVKDL 286
>gi|336234612|ref|YP_004587228.1| shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361467|gb|AEH47147.1| Shikimate dehydrogenase [Geobacillus thermoglucosidasius C56-YS93]
Length = 277
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 148/287 (51%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++ L PV HS P++HN F+H+N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKHLKDAINGVRALGISGLNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AV+ D++ P+A+ I AVNTI+ +G+LIGYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPVARRIGAVNTIVN--ENGRLIGYNTDGPGYVQALEEEVH----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
+ G+ ++ GAGGA R + F +GA+ + I + +AK L + A
Sbjct: 116 -------IDIKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
LN E+ IL N T +GM+P+ + +P+S +++ +V D +Y P +T+
Sbjct: 169 SSAACSLNEAEERLGEYDILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETKW 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+A AI+ +GV MF+ Q F +TG E M++IV+ +
Sbjct: 229 LKEARRRKAIVQNGVGMFVYQGALAFEKWTGAFPDVERMKKIVMEQL 275
>gi|422810317|ref|ZP_16858728.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378751981|gb|EHY62569.1| shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 289
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 152/298 (51%), Gaps = 33/298 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP---DF 290
I+ T++ GLI P+ HSK PI++N +F+ + Y+ F ++K T + +
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLA-FDTPIQKVADTIKAIKIFNL 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K V+K D++ P A+ I AVNTI+ +GKL G+ TD I + DA
Sbjct: 64 RGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFIANLRDA- 120
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 405
+ +AG+ + GAGGA A+ GA+ + IF+I +E+AK
Sbjct: 121 ------------SADVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYEKAKQ 168
Query: 406 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 456
S+ +V D+ LN + IL NAT +GMHPN P++ ++ R
Sbjct: 169 TVTSIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPINNTSVFRK 228
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R++
Sbjct: 229 ELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|408419445|ref|YP_006760859.1| shikimate dehydrogenase AroE [Desulfobacula toluolica Tol2]
gi|405106658|emb|CCK80155.1| AroE: shikimate dehydrogenase [Desulfobacula toluolica Tol2]
Length = 281
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 27/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I++ TK++ + KPV HSK P++HN F+ + N +Y+ +D++ + + G
Sbjct: 2 IDSKTKLYCIFGKPVTHSKSPLIHNACFQKHHMNSVYLAFEIDEISDGVKAMRTLNIKGA 61
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV P+KE++MK+ DE+ A +I AVNT++ R +GKLIGYNTD +A+++ + R
Sbjct: 62 SVTIPFKESIMKYLDEIDEEALSIGAVNTVVNR--NGKLIGYNTDYKAAVSPL------R 113
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS---- 409
+ + ++ ++ G A K +G ++VI + + ER K LAS
Sbjct: 114 PF--------CIMNKKVCIIGAGGAAQAVAYGIHKEKG-KLVIINRNKERGKKLASKYNA 164
Query: 410 -----DVMGAARPFEDILNFQPEKGA-ILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
D M +D +N A I+ N T +GM P+ + L +V D
Sbjct: 165 EFISMDKMNQTEINKDAINKTGIINADIIINTTSIGMSPDIETCAFPSTLLDSRMIVMDI 224
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VYTP KT+LL A++ G + G+ MFL Q QF L+T + MR+ ++
Sbjct: 225 VYTPLKTKLLSIAQSKGCTTIDGLSMFLHQGAAQFKLWTDILPDIKLMRQTII 277
>gi|333987942|ref|YP_004520549.1| shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333826086|gb|AEG18748.1| Shikimate dehydrogenase [Methanobacterium sp. SWAN-1]
Length = 283
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 145/286 (50%), Gaps = 30/286 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I T +FG++ PV HS P +HN TF + + +YVP V L+ S
Sbjct: 2 ITGKTSIFGIMGDPVEHSLSPPMHNTTFSKLAIDSVYVPFHVKKGYLQSAMVGARSMGIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K AV+++ D + A+ I AVNT+ + + ++ GYNTD ++ AIE+
Sbjct: 62 GLNVTIPHKTAVIEYLDSLDTAAKLIGAVNTV--KFDENEVKGYNTDGLGAVKAIEEVTT 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
+ K V+ GAGGA RA++F GA +VI + FE+A L D
Sbjct: 120 VKNKK--------------VVILGAGGAARAISFQILLEGAESLVIANRTFEKAIELKED 165
Query: 411 VMG--------AARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVF 461
+ G F+ L + + IL N TP+GM+PN ++ P V+ + + +V
Sbjct: 166 LAGKLDVNVKTVTLGFD--LENELKNADILINTTPIGMYPNVNQKPLVTADMMHGGLVVN 223
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
D VY P +T LLK+A AGA +SG +M + Q + F ++TG E P
Sbjct: 224 DVVYNPLETGLLKEARKAGAQTISGTKMLIYQGVEAFRIWTGIEPP 269
>gi|433545542|ref|ZP_20501895.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
gi|432183197|gb|ELK40745.1| shikimate 5-dehydrogenase [Brevibacillus agri BAB-2500]
Length = 283
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 154/293 (52%), Gaps = 22/293 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I + T++ GL PV HS+ P++HN F + Y V+ L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSQSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALGLR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K A+M DE+ PLA+ I AVNT++ + DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRSL---VE 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
E G L ++ + GAGGA RA+AF +G + + I + ERA LA
Sbjct: 117 ETGIV---------LDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVLAEH 167
Query: 411 VMGAARPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
V G P + + + ++L N T +GM PN PV + L +V D +Y
Sbjct: 168 V-GTIVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDLIYN 226
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL++A+A GA + SGV MF+ Q F L+TG +AP E MRE+VL +
Sbjct: 227 PLETRLLREAQAIGATVHSGVGMFVNQGALAFELWTGTDAPTEVMREVVLQQL 279
>gi|212224285|ref|YP_002307521.1| shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
gi|212009242|gb|ACJ16624.1| aroE shikimate 5-dehydrogenase [Thermococcus onnurineus NA1]
Length = 275
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 141/283 (49%), Gaps = 19/283 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
++A+T ++GLI +PV HS P +HN FR N +Y+ V DL+ + G
Sbjct: 1 MDAETVLYGLIGRPVSHSLSPAMHNALFRLYGMNAVYLAFEVSDLEGAIKGIRALGIRGL 60
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
+V P+KE V+ D + A+A+ +VNT++ R G+LIG+NTD + A+E K +
Sbjct: 61 NVTMPHKETVVGHLDGLSSEAEALNSVNTVVNR--GGELIGHNTDGVGARKALERFTKLK 118
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
G + VL G S+ A VV+ + ERAK+L +
Sbjct: 119 GRR---------------VLIIGAGGAGKAIAHELSKVASVVVLNRTPERAKTLERFGIE 163
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
R L + +L NATP+GM N +R V E L + +V DAVYTP KT LL
Sbjct: 164 VGRLERSRLEAEIRNADVLINATPVGM--NEERSIVPPELLPEGAVVMDAVYTPPKTLLL 221
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
++AEA G + V G+ M + Q F L+TG +FMR + L
Sbjct: 222 REAEARGCLTVDGLWMLVYQGAESFRLWTGVSPDVDFMRRVAL 264
>gi|119511936|ref|ZP_01631034.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
gi|119463432|gb|EAW44371.1| shikimate 5-dehydrogenase [Nodularia spumigena CCY9414]
Length = 294
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 29/294 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G+I PV HS P++HN + + IY+P + ++L+ + ++ +
Sbjct: 6 ITGKTQLLGVIGHPVEHSLSPVMHNAALAQLGLDYIYLPFPIKPENLEVAIAGLAAINVV 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ P AQAI AVNT+ R+ + + +G NTD E I ++
Sbjct: 66 GFSVTIPHKQAIMPLLSEISPTAQAIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQ---- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFER----AKS 406
++ + ++ V+ G GGA RA+ G + G A++ + + ++ S
Sbjct: 120 --------TTYQQDWSQKIAVILGHGGAARAVVAGCQQLGFAQIHVVGRNMQKLTAFGNS 171
Query: 407 LASDVMG---AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS---EETLRDYQLV 460
S + ++D+ P+ +L N TP+GM+P + PVS + L +
Sbjct: 172 WGSSPLAEKLQVHIWDDLAKLIPQAN-LLVNTTPVGMYPLVNESPVSLADMQKLSSGAIA 230
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
+D +YTP T+ L+ A+ GAI++ G+EM ++Q + ++ +E P + MR+
Sbjct: 231 YDLIYTPNPTQFLQQAQKHGAIVIDGLEMLVQQGVAALKIWLQQETLPVDVMRQ 284
>gi|116873669|ref|YP_850450.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742547|emb|CAK21671.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 289
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 31/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 289
+ I+ T++ LI P+ HSK PI++N +F + Y+ + V+ + + + +
Sbjct: 3 KRISGSTRLLSLIGTPIDHSKSPIMYNYSFEKAGLDYAYLAFDIPVNKVADAITAIKTFN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ D++ P A+ I AVNTI+ +GKL G+ TD +T + D+
Sbjct: 63 LRGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIVNE--NGKLTGHITDGLGFVTNLRDS 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 405
++G+ + GAGGA A+ G + + IF+I +E+AK
Sbjct: 121 -------------SVDVSGKKMTIIGAGGAATAIQVQCALDGVKEIAIFNIQDDFYEKAK 167
Query: 406 ----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-R 455
S+ +V + D+ L + IL NAT +GMHP+ + PV + T+ R
Sbjct: 168 QTVASIKEEVPECSVHIYDLSDTKKLYAEIATSDILVNATLVGMHPHENETPVKDTTVFR 227
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D +YTP+KTRLL DAEAAGA V G+ M L Q + LFTGK+ P ++E+
Sbjct: 228 KDLIVADIIYTPKKTRLLLDAEAAGAKTVGGLGMLLWQGAEAYKLFTGKDMPVAEIKEL 286
>gi|312110148|ref|YP_003988464.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|423719183|ref|ZP_17693365.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215249|gb|ADP73853.1| shikimate 5-dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|383368086|gb|EID45361.1| shikimate 5-dehydrogenase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 277
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 147/287 (51%), Gaps = 20/287 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++ L PV HS P++HN F+H+N Y V+ LK + + +G +V
Sbjct: 3 KLYALFGCPVHHSLSPLMHNDAFQHMNIAARYHAFHVEPKQLKDAINGVRALGISGLNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AV+ D++ P A+ I AVNTI+ +G+LIGYNTD + A+E+ +
Sbjct: 63 IPHKTAVIPLLDDIDPAARRIGAVNTIVN--ENGRLIGYNTDGPGYVQALEEEVH----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
+ G+ ++ GAGGA R + F +GA+ + I + +AK L + A
Sbjct: 116 -------IDIKGKRILVIGAGGAARGIYFSLVDKGAKQIDICNRTVSKAKQLIDECDAAV 168
Query: 416 RPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
LN E+ IL N T +GM+P+ + +P+S +++ +V D +Y P +T+
Sbjct: 169 SSAACSLNEAEERLGEYDILINTTSVGMYPHMEEMPLSLANMKEGTVVSDIIYNPLETKW 228
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+A AI+ +GV MF+ Q F +TG E M++IV+ +
Sbjct: 229 LKEARRRKAIVQNGVGMFVYQGALAFEKWTGAFPDVERMKKIVMEQL 275
>gi|167037479|ref|YP_001665057.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115893|ref|YP_004186052.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856313|gb|ABY94721.1| shikimate 5-dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928984|gb|ADV79669.1| shikimate 5-dehydrogenase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 284
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 22/277 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + S
Sbjct: 3 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKSLGIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 63 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 109 -YGFIDSLTEVGKKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 167
Query: 411 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 168 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 227
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 228 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|317128280|ref|YP_004094562.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
gi|315473228|gb|ADU29831.1| shikimate 5-dehydrogenase [Bacillus cellulosilyticus DSM 2522]
Length = 281
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 148/288 (51%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
++ G+I P+GHS P +HN +R + N Y V + L+ G +V
Sbjct: 3 QIIGVIGDPIGHSLSPHMHNAAYRELGINMEYHAFHVKREQLENALKGVRGLGIKGLNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K V+ + DEV LA+ + AVNTI+ DGKLIG+NTD E + ++ + I+
Sbjct: 63 IPHKVNVLPYLDEVDELARHLGAVNTIVN--EDGKLIGFNTDGEGYLQSLYEFIQ----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVM--- 412
L + ++ GAGGA RA+ + G + +++ + E+ + L D
Sbjct: 116 -------GDLQTKRVLMIGAGGASRAVTLTIANSGVKEIIVTNRTAEKGEELVKDCKKFC 168
Query: 413 -GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+ E++ E+ ++ N T +GM P+ +++P+S + ++ +V D +YTP KT+
Sbjct: 169 PSSFMSLEEV-EKNLERFDVVINTTSIGMAPHLNKLPISLDKVKSDTIVSDLIYTPFKTK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +AE G +++G++MF+ Q F +TG AP + MRE VL +
Sbjct: 228 FLIEAEKKGCRVLNGLDMFVYQGALAFKRWTGINAPTQVMREAVLQQL 275
>gi|282895773|ref|ZP_06303860.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
gi|281199273|gb|EFA74139.1| aroK (Quinate/Shikimate 5-dehydrogenase) [Raphidiopsis brookii D9]
Length = 303
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 143/289 (49%), Gaps = 32/289 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ + +Y+P + D+L++ + ++S
Sbjct: 12 ITGKTKIMGVIGYPVEHSLSPLMHNAALDHLGLDYVYLPFPIAPDNLQEAIACFASIGVV 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ ++ P+AQAI AVNT+IR K +G NTD I ++
Sbjct: 72 GFNVTIPHKQAIIPLLHDLSPIAQAIGAVNTVIR--VGEKWVGTNTDVAGFIAPLQSTYN 129
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ ++ + V+ G GGA +A+ G G + + + E+ K
Sbjct: 130 QNWHE------------KKAVVIGNGGAAKAVVAGCIQLGMTEIHLVGRNIEKLKQFEQS 177
Query: 411 VMGAA-----------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD--- 456
+ + +E + P+ +L N TP+GM+PN D PV+E+ L
Sbjct: 178 WIDSTLADKFTNKLKIHSWEKLPQLIPQSN-LLVNTTPIGMYPNIDESPVTEDQLHQLPS 236
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+ + +D +Y P+ TR L+ A+ GAI + G+EM ++Q L+ +E
Sbjct: 237 HAIAYDLIYIPKPTRFLELAQTQGAIALDGLEMLVQQGAAALKLWLQQE 285
>gi|332157961|ref|YP_004423240.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
gi|331033424|gb|AEC51236.1| shikimate 5-dehydrogenase [Pyrococcus sp. NA2]
Length = 273
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 135/285 (47%), Gaps = 23/285 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
INA TKV+GLI KPV HS PI+HN F N N +Y+ V+ L+ +
Sbjct: 3 INAKTKVYGLIGKPVRHSLSPIMHNALFEKYNINAVYLAFEVELGRLRDAIMGAKALGIM 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K V KF DE+ A+ I +VNTI DG+L+GYNTD + A+E +
Sbjct: 63 GLNVTMPHKVEVTKFLDELSDEAREIGSVNTIAN--EDGRLVGYNTDGIGARKALERVTE 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
G K G + L S+ A VV+ + E+AK L
Sbjct: 121 VEGSKVLILGAGGAGRAIAYEL---------------SKVAEVVVLNRTLEKAKELEK-- 163
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
G + L + E IL NAT +GM VP + LR +V D VY P TR
Sbjct: 164 FGVKGDSLEELPYYIEWADILINATSVGMGEERSIVP--KNLLRPSLVVMDIVYKPLLTR 221
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
LL+DA + G + V G+ M + Q F ++TG E EFMR + L
Sbjct: 222 LLRDARSMGCVTVDGLWMLVYQGAESFKIWTGVEVDVEFMRRVAL 266
>gi|420263280|ref|ZP_14765918.1| shikimate dehydrogenase [Enterococcus sp. C1]
gi|394769568|gb|EJF49413.1| shikimate dehydrogenase [Enterococcus sp. C1]
Length = 289
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 30/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 3 QMITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLD 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 63 LLGVNLSMPHKMAAVPLMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED- 119
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDF 401
+ G+ + GAGGA A+ A G + + + I
Sbjct: 120 ------------IQVSIIGKTMTVIGAGGAATAIISQAALDGVKTIRVFNRKDEFYPIIQ 167
Query: 402 ER----AKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 456
E+ A+ AS++ + L ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 168 EKLTQIAEKTASEITLTDLEDQTALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRE 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y PR+++LLKDA+ GA +G+ M L Q F L+TG+E P E ++ ++
Sbjct: 228 SLAVYDVIYNPRESQLLKDAKEVGAKTANGLSMLLYQGAAAFKLWTGQEMPVEKVKALI 286
>gi|326390171|ref|ZP_08211732.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
gi|325993819|gb|EGD52250.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
Length = 292
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 139/279 (49%), Gaps = 24/279 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ TK++GLI PV HS P++HN F+ +N N +Y V + L+ +
Sbjct: 11 INSSTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTAFDVLPEKLEDAVKGAKALGIK 70
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 411 VMGAARPFEDILNFQ-----PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
+ + D + PE A+L N T +GM+PN + PVSE + + V+D +Y
Sbjct: 176 IKREFKVQCDYCSINEVEEIPEI-AMLVNTTSMGMYPNVEDSPVSERVVSKAKFVYDLIY 234
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
P +T LK A+ G +G+ M L QA F L+TG+
Sbjct: 235 NPFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGE 273
>gi|134298882|ref|YP_001112378.1| shikimate 5-dehydrogenase [Desulfotomaculum reducens MI-1]
gi|170652868|sp|A4J3A0.1|AROE_DESRM RecName: Full=Shikimate dehydrogenase
gi|134051582|gb|ABO49553.1| shikimate dehydrogenase [Desulfotomaculum reducens MI-1]
Length = 291
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 163/293 (55%), Gaps = 25/293 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN T+V GL PV HS P +HN F+ ++ N YVP V D+LK+ + S + A
Sbjct: 6 INGKTQVCGLFGFPVEHSFSPAMHNAAFQQLDLNWTYVPFRVHPDNLKQAVTGIFSLNMA 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K+ VM F DE+ P A+ I AVNTI+ ++GKL+GYNTD + + A+ +
Sbjct: 66 GVNVTVPHKQRVMPFLDELEPAARIIGAVNTIVN--NNGKLVGYNTDGKGFVRALTEE-- 121
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
A F +PL G+ +L GAGGA RA+A G R + I + + E+A+ LA D
Sbjct: 122 --------ARF-NPL-GKSAILIGAGGAARAVAVQLALSGLRTIYITNRNQEKAEELARD 171
Query: 411 VMGAAR------PF-EDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFD 462
++ + P+ ++L + + ++ ATPLGM P D+VP + L LV D
Sbjct: 172 ILESTDTSASMIPWGNNLLGKRMVEVDLVVQATPLGMSPEVDQVPEFPFQMLTPQHLVCD 231
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+Y P +T L+ A++ G+ ++G+ M L Q + F L+TG AP + MR ++
Sbjct: 232 LIYNPEQTCFLRRAKSRGSKTMNGLAMLLYQGVLAFELWTGFTAPVDVMRNVL 284
>gi|296333275|ref|ZP_06875728.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675221|ref|YP_003866893.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149473|gb|EFG90369.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413465|gb|ADM38584.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 280
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 32/293 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + ++ +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLAS----- 409
P++ F++ GAGGA RA+ F +R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARNVPKKFDICNRTLEKAKQLTESTPSF 167
Query: 410 ---DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+V+ E + + ++ + T +GM+PN D VP+S + +V D VY
Sbjct: 168 HNKEVLSIKEAEERLKQYD-----VIIHTTSVGMYPNVDEVPISLQRAASSAVVCDIVYN 222
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 223 PIQTALLKEANQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|162449910|ref|YP_001612277.1| hypothetical protein sce1639 [Sorangium cellulosum So ce56]
gi|161160492|emb|CAN91797.1| aroE1 [Sorangium cellulosum So ce56]
Length = 258
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 142/269 (52%), Gaps = 18/269 (6%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
+ G +H +R + + Y+P V D++ + G V PYK+AV+ DE+
Sbjct: 7 TTGAAMHLAGYRALGLDFTYIPFAVTDVEGATRGMRALGIRGLGVSMPYKQAVIPLLDEL 66
Query: 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
P+A+ I AVNTI+ DG+L GYNTD ++ A+E+ + L G
Sbjct: 67 DPVAERIGAVNTIVN--DDGRLRGYNTDWIGAVRALEEV--------------THLGGAR 110
Query: 371 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 430
+L GAGGA RA+AFG RGA V + + D E+A+ LA+ V GAA P D P+ G
Sbjct: 111 VLLLGAGGAARAVAFGLAERGASVTVANRDLEKARQLAAAVGGAAVPL-DAAALSPDHG- 168
Query: 431 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 490
+L NAT LGM R PV EE LR+ LV D VY P T L+ A GA V G M
Sbjct: 169 VLVNATSLGMAEVDARSPVPEEVLREGLLVMDIVYKPMITELVAAARRRGATAVHGGRML 228
Query: 491 LRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L QA QF L+TG+E P + M E + A+
Sbjct: 229 LHQAAEQFRLYTGREPPLDAMDEALRAQL 257
>gi|15669272|ref|NP_248077.1| shikimate 5-dehydrogenase [Methanocaldococcus jannaschii DSM 2661]
gi|2492956|sp|Q58484.1|AROE_METJA RecName: Full=Shikimate dehydrogenase
gi|1591730|gb|AAB99086.1| shikimate 5-dehydrogenase (aroE) [Methanocaldococcus jannaschii DSM
2661]
Length = 282
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 27/296 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
KN V+ GAGGA RA+AF ++ ++I + E+A++LA ++
Sbjct: 120 RVKDKN-------------IVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 165
Query: 412 -------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 463
G F L+ + I+ NATP+GM+PN D P V E LR+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSG-LDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDL 224
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+Y P +T LLK+A+ A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 225 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|186684355|ref|YP_001867551.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
gi|186466807|gb|ACC82608.1| shikimate 5-dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 295
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 151/300 (50%), Gaps = 29/300 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P +HN ++ + +Y+P + ++L+ + ++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPAMHNAAIANLGLDYVYLPFPIAPENLEVAIAGFAVIGVV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ PLAQ I AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 67 GFSVTIPHKQAIMPLLSEITPLAQMIGAVNTVSRQ--NNQWVGTNTDIEGFIAPLQTTYK 124
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ + ++ V+ G GGA RA+ G G A++ + + +R +
Sbjct: 125 QDWSQ------------KVAVILGNGGAARAVVAGCHQLGFAKIHVVGRNVQRLQEFRDS 172
Query: 411 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 460
+ +E++ P+ +L N TP+GM+P D P+S E + + +
Sbjct: 173 WSNSPISENLQVHQWEELSKLIPQAN-LLVNTTPIGMYPKVDESPLSIEEIANLPTGAIA 231
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE-APKEFMREIVLAKF 519
+D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ +E P E MR+ +L +
Sbjct: 232 YDLIYIPKPTQFLELAQKQGAIAIDGLEMLVQQGVAALKIWLQQENIPVEVMRQALLNQL 291
>gi|46908470|ref|YP_014859.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224844|ref|YP_002758951.1| oxidoreductase [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254825200|ref|ZP_05230201.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853359|ref|ZP_05242707.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254931651|ref|ZP_05265010.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|255520409|ref|ZP_05387646.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|300763954|ref|ZP_07073950.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386732984|ref|YP_006206480.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404281856|ref|YP_006682754.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404287669|ref|YP_006694255.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405750634|ref|YP_006674100.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405753508|ref|YP_006676973.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405756414|ref|YP_006679878.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|406705030|ref|YP_006755384.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424715118|ref|YP_007015833.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424824044|ref|ZP_18249057.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|46881741|gb|AAT05036.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. F2365]
gi|225877306|emb|CAS06020.1| Putative oxidoreductase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606724|gb|EEW19332.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|293583206|gb|EFF95238.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293594445|gb|EFG02206.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300515295|gb|EFK42346.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|332312724|gb|EGJ25819.1| Shikimate dehydrogenase 3 [Listeria monocytogenes str. Scott A]
gi|384391742|gb|AFH80812.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404219834|emb|CBY71198.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes ATCC
19117]
gi|404222708|emb|CBY74071.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2378]
gi|404225614|emb|CBY76976.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2540]
gi|404228491|emb|CBY49896.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes
SLCC2755]
gi|404246598|emb|CBY04823.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|406362060|emb|CBY68333.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L312]
gi|424014302|emb|CCO64842.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 289
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 146/293 (49%), Gaps = 37/293 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 288
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTF--- 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
A + G+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 405 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
K S+ +V D+ LN + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMP 279
>gi|398826203|ref|ZP_10584462.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
gi|398221636|gb|EJN08040.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. YR681]
Length = 292
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 143/284 (50%), Gaps = 34/284 (11%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGFAGTNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
FPYKEAV+ DE+ P A +AAVNT++ R DG+LIG+NTD G+
Sbjct: 75 FPYKEAVVPLLDELAPTAATMAAVNTVVVR--DGRLIGHNTDTT-------------GFA 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLASDVM--- 412
A +P +G + G GG G+A+AF S + + + IFD + RA+ LA+ +
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLKVSDLRIFDSEPARAEKLAALLAPHG 178
Query: 413 GA--ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
GA AR ED L+ GA L N TP+GM PN D PV+ LR+ V DAVY+P
Sbjct: 179 GARVARSVEDALD-----GATGLVNGTPVGMLPNRD-TPVAATLLRENLWVADAVYSPLI 232
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
T LL A A GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAARAKGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|257866088|ref|ZP_05645741.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257872419|ref|ZP_05652072.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
gi|257800022|gb|EEV29074.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC30]
gi|257806583|gb|EEV35405.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC10]
Length = 286
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGTDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDFER 403
+ G + GAGGA A+ A G + + + I E+
Sbjct: 117 ----------IQVSILGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEK 166
Query: 404 AKSLASDVMG--AARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEETL-RDYQ 458
+A ED + + ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 167 LTQIAQKTACEITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTESPLKDKTLLRESL 226
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y PR+T+LLKDA+A GA +G+ M L Q F L+TGK P E ++ ++
Sbjct: 227 AVYDVIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTGKAMPVEKVKALI 283
>gi|268315725|ref|YP_003289444.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
gi|262333259|gb|ACY47056.1| shikimate 5-dehydrogenase [Rhodothermus marinus DSM 4252]
Length = 297
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 145/292 (49%), Gaps = 31/292 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I A T+ L+ PV HS P++HN F+ + +Y+ V D L + + + FA
Sbjct: 9 IRATTRPIALLGDPVAHSFSPLIHNTGFQTQGLDFVYLACRVPKDALPEAIAGLRALGFA 68
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIE 347
G +V P+KEAV D P A+AI AVNTI+ R +DG +LIG NTD E
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGAVELIGDNTDVE------- 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG--AKSRGARVVIFDIDFERAK 405
G+ S LAG V+ GAGGA RA+ + + R R+ I R +
Sbjct: 121 ------GFLEPLQSLADRLAGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGE 174
Query: 406 SLASDVMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSE-ETLRDY 457
+LA+D + P++ A ++ NATP+GMHP+ P E
Sbjct: 175 ALAAD-FATYDTRRALQVMAPDEAAPAVRSACLIVNATPVGMHPHVAASPWPHAEDFGPE 233
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
Q+V+D VY P +TRLL++A A GA + G+ M + QA + +TG+E P+E
Sbjct: 234 QIVYDLVYNPVRTRLLREAAARGATTIDGLTMLIGQAAAAYRQWTGRELPRE 285
>gi|350266770|ref|YP_004878077.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599657|gb|AEP87445.1| shikimate dehydrogenase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 280
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+GHS P +HN + + ++ +G Y V DDL+ + G +V
Sbjct: 3 KLFGVIGNPIGHSMSPDIHNASLKDLSLDGHYHAFKVEEDDLEDAVKGIRALGVHGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDDSAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F +R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARNVPKKFDICNRTLEKAKQLTEST--P 165
Query: 415 ARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
+ +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P +
Sbjct: 166 SFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPISLQRAASSAVVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LLK+A G + GV MF+ QA F L+TG E E MR IV+ K
Sbjct: 226 TALLKEAHQKGLKTLDGVGMFVEQAALSFQLWTGLEPDIEKMRSIVIGKL 275
>gi|217963602|ref|YP_002349280.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386009012|ref|YP_005927290.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|386027625|ref|YP_005948401.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217332872|gb|ACK38666.1| shikimate dehydrogenase [Listeria monocytogenes HCC23]
gi|307571822|emb|CAR85001.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes L99]
gi|336024206|gb|AEH93343.1| putative shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 289
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 150/298 (50%), Gaps = 33/298 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP---DF 290
I+ T++ GLI P+ HSK PI++N +F+ + Y+ F ++K T + +
Sbjct: 5 ISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLA-FDTPIQKVADTIKAIRTFNL 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + DA
Sbjct: 64 RGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA- 120
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 405
+ G+ + GAGGA A+ GA+ + IF+I +++AK
Sbjct: 121 ------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQ 168
Query: 406 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 456
S+ +V D+ LN + IL NAT +GMHPN P+S ++ R
Sbjct: 169 TVASIKQEVPHCIVHIYDLNDTEKLNAEIATSDILVNATLVGMHPNEHETPISNTSVFRK 228
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P +R++
Sbjct: 229 ELIVTDIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVRDL 286
>gi|261349968|ref|ZP_05975385.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
gi|288860751|gb|EFC93049.1| shikimate dehydrogenase [Methanobrevibacter smithii DSM 2374]
Length = 281
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 149/293 (50%), Gaps = 34/293 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN TK+ GLI PV HS P +HN F + + YVP V ++LK S +
Sbjct: 2 INGSTKIVGLIGHPVEHSFSPPMHNAAFEELGLDYAYVPFNVCPENLKSAILGAKSLNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K VMK+ D++ +A+ I AVNTI + ++ GYNTD I AI +
Sbjct: 62 GFNVTIPHKINVMKYLDKLDSIAKLIGAVNTIDFK----EMKGYNTDGIGCIKAIGEV-- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 410
+ + + V+AGAGGA RA++F A+ + I + D +AKSLA D
Sbjct: 116 ------------TSIKDKNIVVAGAGGASRAISFYLARENPQSIHILNRDINKAKSLAED 163
Query: 411 VMGAARPFEDILNFQP--------EKGAILANATPLGM--HPNTDRVPVSEETLRDYQLV 460
V + D ++F IL + TP+GM H N + + +E+ D +V
Sbjct: 164 VKNSK--LTDNVDFDSIDKIVGYVSDADILIDTTPVGMSSHVNEEAIVKAEDMHSDL-VV 220
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D VY P +T LL +A AGA V G++M L Q F ++TG++AP + M +
Sbjct: 221 NDIVYNPNETVLLSEAIKAGATPVYGIKMLLYQGAESFEIWTGEKAPVDVMEK 273
>gi|75909313|ref|YP_323609.1| shikimate 5-dehydrogenase [Anabaena variabilis ATCC 29413]
gi|123609023|sp|Q3M8H2.1|AROE_ANAVT RecName: Full=Shikimate dehydrogenase
gi|75703038|gb|ABA22714.1| shikimate dehydrogenase [Anabaena variabilis ATCC 29413]
Length = 289
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 148/293 (50%), Gaps = 27/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + +Y+P + D+L+ + ++
Sbjct: 2 ITGKTKLLGVIGHPVEHSLSPVMHNAAIAQLGLDYVYLPFPIAPDNLEAAIALLATIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ + + +G NTD E I ++ K
Sbjct: 62 GFSVTIPHKQAIIPLLAEISPVAQAIGAVNTVTRQ--NNQWVGTNTDIEGFIAPLQTTYK 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL--A 408
R + A V+ G GGA RA+ G G A + + + +R + +
Sbjct: 120 -RDWSQQIA-----------VILGNGGAARAVVAGCYQLGFAEIHVVGRNVQRLEEFRHS 167
Query: 409 SDVMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LVF 461
D A + D L + +L N TP+GM+P D P+S E L + Q + +
Sbjct: 168 WDNSPIAENLQVHTWDYLAKLVPQANLLVNTTPIGMYPQVDESPLSTEELANLQTGAIAY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMRE 513
D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ + + P + MR+
Sbjct: 228 DLIYIPKPTQFLQKAQQQGAIAIDGLEMLVQQGVAALKIWLQQDDIPVDVMRQ 280
>gi|399046902|ref|ZP_10739090.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
gi|398055052|gb|EJL47144.1| shikimate 5-dehydrogenase [Brevibacillus sp. CF112]
Length = 283
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 22/293 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I + T++ GL PV HS P++HN F + Y V+ L+ + +
Sbjct: 2 ITSKTQLVGLFGHPVSHSLSPMMHNAAFAETGLDFAYSAFDVEPEALEDAVAGIRALGLR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K A+M DE+ PLA+ I AVNT++ + DG+LIGYNTD + ++ ++
Sbjct: 62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSK--DGRLIGYNTDGMGYVRSL---VE 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
E G L ++ + GAGGA RA+AF +G + + I + ERA LA
Sbjct: 117 ETGIV---------LDKQIVTMMGAGGAARAVAFTLAEKGVKEIRIINRSRERAAVLAEH 167
Query: 411 VMGAARPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
V G P + + + ++L N T +GM PN PV + L +V D +Y
Sbjct: 168 V-GTIVPTRIVEQGEGKDAIADSSLLINTTSIGMLPNVQDTPVPADWLHSGLIVSDLIYN 226
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL++A+A GA + SGV MF+ Q F L+TG +AP E MRE+VL +
Sbjct: 227 PLETRLLREAQAIGATVHSGVGMFVNQGALAFELWTGTDAPTEVMREVVLQQL 279
>gi|29726767|pdb|1NVT|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
gi|29726768|pdb|1NVT|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or
Mj1084) In Complex With Nadp+
Length = 287
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 27/296 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 7 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 67 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 124
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
KN V+ GAGGA RA+AF ++ ++I + E+A++LA ++
Sbjct: 125 RVKDKN-------------IVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEI 170
Query: 412 -------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 463
G F L+ + I+ NATP+GM+PN D P V E LR+ +V D
Sbjct: 171 AEKLNKKFGEEVKFSG-LDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDL 229
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+Y P +T LLK+A+ A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 230 IYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 285
>gi|423068252|ref|ZP_17057040.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
gi|355367143|gb|EHG14856.1| shikimate dehydrogenase [Streptococcus intermedius F0395]
Length = 284
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYVAWEISEDDLKTTVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ ++ G+GGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGSGGAATAIIVQAVLEGADEIFVFTRKTSFERVLQQM 165
Query: 409 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
+ AA P E ++L + A+L N T LGM T VP S L LV
Sbjct: 166 KQIQQAASTKISVLPLEQRELLQEKLNASALLVNGTSLGMDEKTSPVP-STIRLSKSLLV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMPTKEIWQALEQKY 283
>gi|145577901|gb|ABP82669.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 135/254 (53%), Gaps = 30/254 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K ++MK+ D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + +++ KE PL
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DGKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL--------ASDVMGAARPFE 419
+ +L GAGGA RA+ F G + + I + E+A L S + R E
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATE 166
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
+ N+ I+ + T +GMHP+ P+ +L+ +V D +Y P +T+LL+DA+A
Sbjct: 167 EQGNYD-----IIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAK 221
Query: 480 GAIIVSGVEMFLRQ 493
GAI+ +G++MF+ Q
Sbjct: 222 GAIVQNGIDMFVYQ 235
>gi|333998596|ref|YP_004531208.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
gi|333741045|gb|AEF86535.1| putative 3-dehydroquinate dehydratase, type 1/shikimate
5-dehydrogenase [Treponema primitia ZAS-2]
Length = 506
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/526 (25%), Positives = 232/526 (44%), Gaps = 56/526 (10%)
Query: 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LPVL 68
IC L +++ + L + + + + D+ E+R+D + +P D +++ + P LPVL
Sbjct: 4 ICLCLTGKTIAKDLEVLEKHR-KYVDMAELRVD---HLEP--DERLLIRRFPEQAGLPVL 57
Query: 69 IVYRPKWAGGLYEGDEHKRL----EALHLAE-DLGADYVDFELKVASNILGKQYSSHQSG 123
+ R K GG + G E R+ + L AE D ++ +L+ N+ + ++ G
Sbjct: 58 LTIRRKMDGGKFAGGEGARISLFSKGLAFAEADRRHNFAYVDLEEDLNVPSLEEAARTFG 117
Query: 124 TRFIVSC-NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ-V 181
TR I S NL +EDL + + G +I K+ + ++ R+++ +
Sbjct: 118 TRIIRSYHNLQG---VDEDLPGKIRGLLHVGDEIAKVAVMPHGFDDVLRVYRAAKDTAGI 174
Query: 182 PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT--------PVLGLPTVESLRQTYKVEH 233
I +G G +++L+ L Y S +GT G + L + Y+
Sbjct: 175 EKILLCMGHMGTSTRILAEYLGSHLSYASAEGTEQDSDFPPAAPGQISPRELVELYRFRE 234
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
+ + T++FG++ P+ S P N F N + +YVP D + F + G
Sbjct: 235 LTSQTRLFGILGYPLKVSSSPAFFNAVFTSENTDAVYVPFPSDSVDPFMQLAAEIKLQGV 294
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
SV PYKE V+ + ++ + + A NT+I DG G NTD ++ D I +
Sbjct: 295 SVTIPYKEKVIPYLNKKLGDVETLGACNTLIAE-EDG-WTGANTDARGFSDSLLDFIGKT 352
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
+K G + GAGG +A+A + +I + RA+ A+
Sbjct: 353 NFK-----------GCRITIIGAGGVSKAVAAEIFRLKGKALILNRTVPRAREEAA---- 397
Query: 414 AARPFEDILNFQPEKGAILANA--------TPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
P+ GA L NA T +GM P+ + P+ + ++V D +Y
Sbjct: 398 ---PYRFAWGSLDTHGAELMNAYSDIIVQTTSVGMDPDIEGDPLEIYAFKGTEVVMDLIY 454
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
P +TR L A AAG +++G +M +RQA Q++ + GKE P + +
Sbjct: 455 KPERTRFLIRAAAAGCRVMNGHDMLIRQAKYQYSYYLGKEYPSKLV 500
>gi|167040141|ref|YP_001663126.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307724540|ref|YP_003904291.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
gi|166854381|gb|ABY92790.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X514]
gi|307581601|gb|ADN55000.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X513]
Length = 284
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 22/277 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + +
Sbjct: 3 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 63 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 109 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 167
Query: 411 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 168 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 227
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 228 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|440684478|ref|YP_007159273.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
gi|428681597|gb|AFZ60363.1| shikimate dehydrogenase [Anabaena cylindrica PCC 7122]
Length = 288
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 153/295 (51%), Gaps = 31/295 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ TK+ G+I PV HS P++HN + + +Y+P + ++L+ + +++
Sbjct: 2 ISGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFTAIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ F E+ P+AQAI AVNT+ R+ +G NTD E I+ ++
Sbjct: 62 GFSVTIPHKQAILPFLTEISPIAQAIGAVNTVTRQ--GNGWVGTNTDVEGFISPLQ---- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ + + V+ G GGA RA+ G G A + + + ++
Sbjct: 116 --------TTYNQDWSQKTAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLTEFWQS 167
Query: 411 VMGAARPFED---ILNFQ--PE---KGAILANATPLGMHPNTDRVPVSEETLRDYQ---L 459
+ PF D + ++Q P+ + +L N TP+GM+P+ D+ P+S E + D +
Sbjct: 168 WQNS--PFADKFQVHDWQELPKLIPQANLLVNTTPVGMYPHVDQSPLSIEEMVDLPSGGI 225
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE-APKEFMRE 513
V+D +Y P+ T+ LK AE GAI + G+EM ++Q ++ +E P MR+
Sbjct: 226 VYDLIYIPKPTQFLKLAEKQGAIPIDGLEMLVQQGAAALKIWLQQENVPITEMRQ 280
>gi|448318951|ref|ZP_21508461.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
gi|445597479|gb|ELY51554.1| shikimate 5-dehydrogenase [Natronococcus jeotgali DSM 18795]
Length = 266
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 138/284 (48%), Gaps = 22/284 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 296
V+GL+ PVGHS P +H + + YV D+L+ + G +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYDELALEARYVTFEPAPDELEAAIRGAGALGIRGLNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K V++F E LA I A NTI S + G+NTD ++ A+ D
Sbjct: 62 IPFKRDVLEFV-EPDELASRIGAANTIDF--SGAEPTGHNTDAAGALRALRD-------- 110
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-A 415
G L G ++ GAGGAGRA++FG GA V I + A+ LA++V GA
Sbjct: 111 -----HGVALEGADALVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAAEVPGADG 165
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
R ED L + +L NAT +GM D PV E L V DAVY P +TRLL+D
Sbjct: 166 RGLED-LEDAVDDADVLVNATSVGME--EDATPVPSEVLHGELAVLDAVYRPLETRLLRD 222
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
A AAGA V G M L Q + F L+T + AP + M E + ++
Sbjct: 223 AAAAGATTVDGAWMLLYQGVEAFELWTDRTAPVDEMNEALRSRL 266
>gi|282881812|ref|ZP_06290468.1| shikimate dehydrogenase [Peptoniphilus lacrimalis 315-B]
gi|281298348|gb|EFA90788.1| shikimate dehydrogenase [Peptoniphilus lacrimalis 315-B]
Length = 286
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 25/295 (8%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 290
+I+ +TK+ GL+ P+ HS P +HN +F V + +Y+ P DL+K T
Sbjct: 2 NISGNTKLIGLLGDPISHSLSPFMHNLSFNKVKKDYVYLCLPTGKKDLEKVLDTLKIIGA 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ +P K ++K+ DE Q I + NTI + K+ GYNTD
Sbjct: 62 RGANITYPNKIEILKYLDEASEEVQIIGSCNTI-SIDENKKIKGYNTDG----------- 109
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 409
RG+ + + G+ F + G GGAG A+A G R+ + +IDF++AK++
Sbjct: 110 --RGFVQSLKNNSIEIKGKTFGIMGLGGAGSAIATCLGLEGLKRLYVKEIDFDKAKTVKK 167
Query: 410 DVMGAARPFEDILNFQPE-------KGAILANATPLGMHPNTDRVPVSEETLRDYQLV-F 461
+ + E IL + K +++ NATP+GM + D P+ E LR + L+ +
Sbjct: 168 RLEEKIKGLEIILTKDQQDFAKNLDKMSLVINATPIGMGRSKDDSPMDPEYLRGFPLIIY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
D +Y+P +T LL+ A++ G + +G++M + Q FN++TG+E + ++E ++
Sbjct: 228 DVIYSPLETTLLRKAKSYGLKVFNGIDMMINQGAISFNIWTGQEMDTKLVKERIV 282
>gi|394992034|ref|ZP_10384827.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
gi|393807050|gb|EJD68376.1| shikimate 5-dehydrogenase [Bacillus sp. 916]
Length = 280
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 417 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LK+AE G + GV MF+ QA F L+TG+E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTGQEPDSGLMRAIVEGKL 275
>gi|300914225|ref|ZP_07131541.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
gi|300889160|gb|EFK84306.1| shikimate 5-dehydrogenase [Thermoanaerobacter sp. X561]
Length = 292
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 22/277 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN++TK++GLI PV HS P++HN F+ +N N +Y V + L+ + +
Sbjct: 11 INSNTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEDAVNGVKALGIK 70
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 71 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--EGILKGYNTDV------------ 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 411 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 176 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 235
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 236 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 272
>gi|443309942|ref|ZP_21039617.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
gi|442779995|gb|ELR90213.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 7509]
Length = 291
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 34/296 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS PI+HN H+ + +Y+P+ V D+L+ S +++ D
Sbjct: 5 ITGKTKLLGVIGHPVEHSLSPIMHNAAIAHLGLDYVYLPLPVHPDNLQAAISGFAAIDLV 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A+ E+ A+AI A+NT+ R S G NTD E IT ++
Sbjct: 65 GFNITIPHKQAITPLITEISATAKAIGAINTVWRT-SSSIWAGTNTDVEGFITPLQ---- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-----------ARVVIFDID 400
++ + + ++ G GGA RA+ G G ++ F
Sbjct: 120 ---------TYAQNWSEKTALVLGNGGAARAVVAGCAQLGFKETYVVGRNPTKLAEFIAS 170
Query: 401 FERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET---LRDY 457
+ + +LA+ ++ R ++ + P+ I+ N TP+GM+PN P+S+E L
Sbjct: 171 WGNS-ALATQLL--VRSWDKLPLLIPQAKVII-NTTPIGMYPNVRESPLSDEEMGLLAAD 226
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+ +D +YTP T+ L+ A+A GA + G+EM ++Q ++ + AP + MR+
Sbjct: 227 AIAYDLIYTPSPTKFLQQAQAKGATAIDGLEMLVQQGAAALKIWLQQPAPIDVMRQ 282
>gi|257875721|ref|ZP_05655374.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257809887|gb|EEV38707.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 286
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ L +KP HS P +HN +F + +Y+ V DDL + D
Sbjct: 2 ITGHTRLAALFAKPAKHSISPAMHNLSFEEQGIDAVYLAFDVEPDDLAASIQSIRQLDLL 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K A + DE P A+ I A+NTI+ + +G+LIG+NTD + A+ED
Sbjct: 62 GVNLSMPHKMAAVALMDECSPAAELIGAINTIVNQ--EGRLIGHNTDGIGFMRALED--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDFER 403
+ G + GAGGA A+ A G + + + I E+
Sbjct: 117 ----------IQVSIIGDTMTVIGAGGAATAIISQAALDGVKTIHVFNRKDEFYPIIQEK 166
Query: 404 AKSLASDVMG--AARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEETL-RDYQ 458
+A ED + + ++ ++L NAT +GM PN P+ ++TL R+
Sbjct: 167 LTQIAQKTACEITLTDLEDQMALKTAIDQSSLLVNATGVGMKPNDTVSPLKDKTLLRESL 226
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y PR+T+LLKDA+A GA +G+ M L Q F L+TGK P E ++ ++
Sbjct: 227 AVYDVIYNPRETQLLKDAKAVGAKTANGLSMLLYQGAAAFELWTGKAMPVEKVKALI 283
>gi|392428507|ref|YP_006469518.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
gi|419777500|ref|ZP_14303412.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|383844980|gb|EID82390.1| shikimate dehydrogenase [Streptococcus intermedius SK54]
gi|391757653|dbj|BAM23270.1| shikimate dehydrogenase [Streptococcus intermedius JTH08]
Length = 284
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 143/289 (49%), Gaps = 35/289 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK D
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ ++ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRQTSFERVSQQM 165
Query: 409 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-- 458
+ AA P E ++L + A+L N T LGM T VP +T+R +
Sbjct: 166 KQIQQAASTKISVLPLEQRELLQEKLNVSALLVNGTSLGMDEKTSPVP---DTIRLSKTL 222
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
LV D +Y P +T L+ A+ +V+G+ M L QA F L+TGK+ P
Sbjct: 223 LVADVIYQPFETPFLQWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMP 271
>gi|428280059|ref|YP_005561794.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
gi|291485016|dbj|BAI86091.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. natto BEST195]
Length = 280
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 415 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|345017564|ref|YP_004819917.1| shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032907|gb|AEM78633.1| Shikimate dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 292
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 139/278 (50%), Gaps = 22/278 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA+TK++GLI PV HS P++HN F+ +N N +Y V + L++ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFKSLNLNCVYTVFDVLPEKLEEAVKGVKALGIR 70
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GVNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 411 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 176 IKREFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 235
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
P +T LLK A+ G +G+ M L QA F L+TG+
Sbjct: 236 PFETALLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGE 273
>gi|435846092|ref|YP_007308342.1| shikimate dehydrogenase [Natronococcus occultus SP4]
gi|433672360|gb|AGB36552.1| shikimate dehydrogenase [Natronococcus occultus SP4]
Length = 266
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 141/284 (49%), Gaps = 22/284 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 296
V+GLI PVGHS P +H + + + YV D+L+ + G +V
Sbjct: 2 DVYGLIGNPVGHSLSPPMHEAAYDELGIDARYVTFEPAPDELEAAIRGAEALGVCGLNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K V++F E LA I AVNTI S + G+NTD ++ A+ +E G
Sbjct: 62 IPFKRDVLEFV-EPDELAGRIGAVNTIDF--SGPEPTGHNTDAAGALRAL----REDGVV 114
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-A 415
L ++ GAGGAGRA++FG GA V I + A+ LA+DV GA
Sbjct: 115 ---------LEDADVLVVGAGGAGRAISFGLADAGAAVTIANRTASTARELAADVPGADG 165
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
R ED+ + + +L NAT +GM D PV E L V DAVY P +TRLL+D
Sbjct: 166 RGLEDLGDVLADAD-VLVNATSVGME--EDATPVPAEALHGELAVLDAVYRPLETRLLRD 222
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AE AGA V G M L Q + F L+T + AP E M E + ++
Sbjct: 223 AEDAGATTVDGAWMLLYQGVEAFELWTDRTAPVEEMNEALRSRL 266
>gi|424787497|ref|ZP_18214263.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
gi|422113792|gb|EKU17519.1| shikimate 5-dehydrogenase [Streptococcus intermedius BA1]
Length = 284
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 143/289 (49%), Gaps = 35/289 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+Y+ V DDLK D
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEVSKDDLKATVENIRRYDMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ ++ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRKTSFERVSQQM 165
Query: 409 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-- 458
+ AA P E ++L + A+L N T LGM T VP +T+R +
Sbjct: 166 KQIQQAASTKISVLPLEQRELLQEKLNVSALLVNGTSLGMDEKTSPVP---DTIRLSKTL 222
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
LV D +Y P +T L+ A+ +++G+ M L QA F L+TGK+ P
Sbjct: 223 LVADVIYQPFETPFLQWAKKQNVQVINGLGMLLYQAAEAFKLWTGKDMP 271
>gi|418965062|ref|ZP_13516849.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343895|gb|EID22067.1| shikimate dehydrogenase [Streptococcus constellatus subsp.
constellatus SK53]
Length = 284
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISEDDLKTTVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ ++ G+GGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGSGGAATAIIVQAVLEGADEIFVFTRKTSFERVLQQM 165
Query: 409 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
+ AA P E ++L + A+L N T LGM T VP S L LV
Sbjct: 166 KQIQQAASTKISVLPLEQRELLQEKLNASALLVNGTSLGMDEKTSPVP-STIRLSKSLLV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKKQNVQVVNGLGMLLYQAAEAFKLWTGKDMPTKEIWQALEQKY 283
>gi|422419863|ref|ZP_16496818.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|422422950|ref|ZP_16499903.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313632237|gb|EFR99299.1| shikimate dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313636739|gb|EFS02399.1| shikimate dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 289
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 4 RISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFNL 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 64 RGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG----------- 110
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 405
G+ + G +AG+ + GAGGA A+ + GA+ + IF+I +++AK
Sbjct: 111 --LGFASNLRDSGVTVAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAKQ 168
Query: 406 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
S+ +V D+ L + IL NAT +GMHP + PV + T+
Sbjct: 169 TVASIKQEVPNCIVQIYDLNDTEKLYAEIATSDILVNATLVGMHPYESKTPVKDATIFHK 228
Query: 458 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
L+ D VY P+KT+L+ DAEAAG V G+ M L Q + LFTG++ P E ++E+
Sbjct: 229 NLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVEEVKEL 286
>gi|334116684|ref|ZP_08490776.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
gi|333461504|gb|EGK90109.1| Shikimate dehydrogenase [Microcoleus vaginatus FGP-2]
Length = 325
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 39/317 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P +HN H+ + +Y+P V DLK + +++
Sbjct: 2 IKGTTKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGFAAIGVR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE---- 347
GFS+ P+K+A++ EV P+A+AI AVNT+ SD G NTD E + ++
Sbjct: 62 GFSITIPHKQAILPLLSEVSPIARAIGAVNTVYL--SDKGWCGTNTDVEGFLAPLQTPPT 119
Query: 348 --------DAIK--ERGYK---------NGTASFGSPLAGRMFVLAGAGGAGRALAFGAK 388
DA ERG G A GS + ++ V+ G GGA RA+ G
Sbjct: 120 PPYQGGAKDATSPLERGNTAVESCPPPYQGGARGGSDWSQKVAVILGNGGAARAVVAGCA 179
Query: 389 SRG-ARVVIFDIDFERAKSLASDVMGAARPFEDI-------LNFQPEKGAILANATPLGM 440
G A + + + + + + P +++ L+ + +L N TP+GM
Sbjct: 180 QLGCAEIHVVGRNEQNLAEFQQSWINSPMPVQNLQVHTWENLSMLISQADLLVNTTPVGM 239
Query: 441 HPNTDRVPVSEETLRDYQ---LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQ 497
+P ++ PV+E L +V+D +YTP T+ LKDA+ GA + G+EM ++Q
Sbjct: 240 YPQGEKSPVAEGALDRISAGAIVYDLIYTPNPTQFLKDAKLRGARAIDGLEMLVQQGAAA 299
Query: 498 FNLFTGKEA-PKEFMRE 513
++ KE+ P MR+
Sbjct: 300 LKIWLDKESVPVHVMRQ 316
>gi|428180770|gb|EKX49636.1| hypothetical protein GUITHDRAFT_67756, partial [Guillardia theta
CCMP2712]
Length = 1505
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 237/531 (44%), Gaps = 47/531 (8%)
Query: 15 APLMAQSVEQVLS--NMYQAKA------EGADVVEIRLDCINN---FQPGKDLEIILTKK 63
AP++ S+ L+ +M +A + GADV+E R+D +++ I+
Sbjct: 979 APVVEDSITISLTYPDMKEASSYIPEIERGADVLEFRVDLLSDCSLLNARLQHAILRRVA 1038
Query: 64 PLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSG 123
LP+L R GG + G E + L L L LG ++VD E S + K +
Sbjct: 1039 TLPILWTVRSVSQGGKFAGSEEEMLALLQLGLRLGCEFVDVE-SCWSTAMCKAVVDKKGS 1097
Query: 124 TRFIVSCNLDCE---TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIA----RIFQLL 176
+R + S + E T E + +L RMQ GAD++K+ T++A I +
Sbjct: 1098 SRVVASFHDFSERAYTAEELEKLFLRLRMQG-GADVVKVAIRTTKATQVADMQHAINRFR 1156
Query: 177 SHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HIN 235
+ +P + +GE G +S++L+ KF + L GT G E +R+ KVE +
Sbjct: 1157 ARSSLPAVGLCMGEEGKLSRVLN-KFLTFSTHPLLPGTAAPGQLVAEDIRR-LKVELGLL 1214
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGI-YVPMFVDDLKKFFSTYSSPDFAGFS 294
T F L P+ S P +HN F G Y D+ T SS F G S
Sbjct: 1215 PATCSFFLFGSPIAKSASPAMHNAAFAACGLKGWSYERCETADVSVALETISSASFGGGS 1274
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGK--LIGYNTDCEASITAIEDAIK 351
V P KE ++ + A+ I AVNTI ++R DG LIG NTD A ++D +
Sbjct: 1275 VTIPLKEELLPHMHILTDSARRIGAVNTITVKRGGDGSRILIGDNTDWVAIHRLVQDRLN 1334
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RG--ARVVIFDIDFERAKSLA 408
R G G P +L GAGG RA + K RG V++++ RA++LA
Sbjct: 1335 MRRLAQG----GEP----RVLLVGAGGTARAAMYALKKLRGITGPVLVYNRTKSRAEALA 1386
Query: 409 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
++ A ED L+ + G I++ P G + E L+ ++ DA Y P
Sbjct: 1387 AEF--GAEVVED-LSSVTQLGVIVSTIPPDG------HAVIPETLLQARPIMLDASYLPG 1437
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T L + A AAG ++ G M QA Q +TG++A + M + + + F
Sbjct: 1438 GTSLSQRAAAAGCDLIIGPHMLFEQATYQSERWTGRKARRSVMAKAICSHF 1488
>gi|304403896|ref|ZP_07385558.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304346874|gb|EFM12706.1| shikimate 5-dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 293
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ T +FG+I P+ HSK P++ N FR NG+Y + D L F + +
Sbjct: 15 IDSHTVLFGVIGDPIRHSKSPVMLNRAFREAGVNGVYTAFHITPDKLGDFIAGVRAMGIR 74
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VMK D + A AI AVNTI+ +G L G+NTD + ++++ +
Sbjct: 75 GVNVTIPHKLDVMKHLDRIDESALAIGAVNTIVN--DNGVLTGFNTDGIGYVRSLKEEAE 132
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS- 409
L G+ V+ GAGGA R + + + A + I + +RA LA+
Sbjct: 133 ------------PTLDGKNIVVLGAGGAARGIVYALTNESPAAITIVNRTEQRAVELAAS 180
Query: 410 -----DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
DV G + D L I+ N T GM P+ + PV LR + D +
Sbjct: 181 MRERADVRGVS---TDSLQSVCVDADIIINTTSTGMFPHVEESPVEASWLRPGAVASDII 237
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P KT+ L DAE G I G+ MF+ Q F +TG+ AP MRE VL F
Sbjct: 238 YNPMKTKFLADAERQGCRIHGGLGMFIYQGAYAFEYWTGQPAPAAAMREAVLDAF 292
>gi|167768014|ref|ZP_02440067.1| hypothetical protein CLOSS21_02557 [Clostridium sp. SS2/1]
gi|317498392|ref|ZP_07956687.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710343|gb|EDS20922.1| shikimate dehydrogenase [Clostridium sp. SS2/1]
gi|316894286|gb|EFV16473.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 291
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ TK+FGLI PV HS P + N F+ +G Y+ + +++ +F + +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K A + DE+ P A+ I AVNTI+ R DGKL G+ TD E + ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 406
G + G+ V+ GAGGA A+ GA+ + IF D FERA+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQK 168
Query: 407 LASDVMGAARPFE---------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
+ + + D + + + IL N T LGM P D +S+ T+
Sbjct: 169 MVEKIKAKVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHE 228
Query: 458 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LV D VY P +TR L++A+ G I V G M L Q + F LFTGK+ P + ++E
Sbjct: 229 GLVVADVVYNPEETRFLREAKEHGCITVPGKGMLLWQGVASFKLFTGKDMPVDEVKE 285
>gi|147669087|ref|YP_001213905.1| shikimate 5-dehydrogenase [Dehalococcoides sp. BAV1]
gi|189046312|sp|A5FRZ5.1|AROE_DEHSB RecName: Full=Shikimate dehydrogenase
gi|146270035|gb|ABQ17027.1| shikimate dehydrogenase [Dehalococcoides sp. BAV1]
Length = 286
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G++ GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQMKGYNTDFGGFVRLLEH--------N 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 413
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 414 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
A+ E + N + + I+ N TP+GM + +S LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLISPRLLRPDLTVIDAIYNPCKT 232
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 517
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|157694398|ref|YP_001488860.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
gi|157683156|gb|ABV64300.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 300
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 36/304 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKLIGYNTD
Sbjct: 68 AGFNVSMPNKMKVLNYLDELDDSAKYTRASNTVVNK--DGKLIGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF------------ 397
GY G LAG+ L G+GGA +A G R + IF
Sbjct: 115 --LGYVRNLIEHGVELAGKKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 398 DIDFERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 454
++++ + + V P ED F+ E + AILAN T LGM P D++ + ++TL
Sbjct: 173 NVNYINNEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDQLSIIDDTLD 231
Query: 455 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
R+ +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P + ++
Sbjct: 232 VLREDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVDQVK 291
Query: 513 EIVL 516
+I+
Sbjct: 292 QILF 295
>gi|288555655|ref|YP_003427590.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
gi|288546815|gb|ADC50698.1| shikimate 5-dehydrogenase [Bacillus pseudofirmus OF4]
Length = 278
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 21/285 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K FGLI PV HS P +HN FR + Y + V+ DL++ G +V
Sbjct: 3 KRFGLIGHPVAHSMSPQMHNDAFRACEIDADYEAIDVEAGDLEEVMEKIRIGVLDGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M F DE+ A+ I AVNTI+R ++GKL+GYNTD + +IE +
Sbjct: 63 IPHKVAIMSFIDEIDREAERIGAVNTIVR--NNGKLVGYNTDGAGYMQSIEPYLP----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 415
S L ++ GAGGA RA+ G + +V+ + E+A +L + +
Sbjct: 116 -------SNLHDINVLVIGAGGAARAVCASFLGAGVSSLVVANRTKEKADTLLNLISTKQ 168
Query: 416 RPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+ + EKG I+ N T +GM P T++ P+S L+D +V D +Y P +T
Sbjct: 169 DQTNAMTLSEAEKGLERFDIIVNTTSVGMSPYTEQKPISLTKLKDKAIVSDLIYNPLETA 228
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
LK+A GAI V+GV MF+ Q F +TG + ++ M IVL
Sbjct: 229 FLKEAAERGAITVNGVGMFVNQGALSFEYWTGIKPDRKRMTNIVL 273
>gi|389573017|ref|ZP_10163093.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
gi|388427174|gb|EIL84983.1| shikimate dehydrogenase [Bacillus sp. M 2-6]
Length = 300
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 152/304 (50%), Gaps = 36/304 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ + +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKL+GYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF------------ 397
GY G LAG+ L G+GGA +A G R + IF
Sbjct: 115 --LGYVRNLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 398 DIDFERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 454
++++ + + V P ED F+ E + AILAN T LGM P D + + ++TL
Sbjct: 173 NVNYINNEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDELSIIDDTLD 231
Query: 455 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
R +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P E ++
Sbjct: 232 VLRKDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVEQVK 291
Query: 513 EIVL 516
+I+
Sbjct: 292 QILF 295
>gi|300814852|ref|ZP_07095086.1| shikimate dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511048|gb|EFK38314.1| shikimate dehydrogenase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 286
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 153/295 (51%), Gaps = 25/295 (8%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 290
+I+ +TK+ GL+ P+ HS P +HN +F V + +Y+ P DL K T
Sbjct: 2 NISGNTKLIGLLGDPISHSLSPFMHNLSFNKVKKDYVYLCLPTGKKDLGKVLETLKIVGA 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ +P K ++K+ DE Q I + NTI+ + K+ GYNTD
Sbjct: 62 KGANITYPNKIEIVKYLDEASDEVQIIGSCNTILI-DENKKIKGYNTDG----------- 109
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 409
RG+ + + G+ F + G GGAG A+A +G R+ + ++DF++AK++
Sbjct: 110 --RGFVKSLKNNSIDIKGKTFGIMGLGGAGSAIATCLGLQGLKRLYVKEVDFDKAKNVKK 167
Query: 410 DVMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQ-LVF 461
+ + E IL EK +++ NATP+GM + D P+ E LR + +++
Sbjct: 168 RLEEKIKGLEIILTKDQQDFAQNLEKMSLVINATPIGMGRSKDDSPMDPEYLRGFPVIIY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
D +Y+P +T LL+ A++ G + +G++M + Q FN++TG+E + ++E ++
Sbjct: 228 DIIYSPLETTLLRKAKSYGLKVFNGIDMMINQGAISFNIWTGEEMDTKLVKERIV 282
>gi|407980292|ref|ZP_11161085.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
gi|407413004|gb|EKF34747.1| shikimate dehydrogenase [Bacillus sp. HYC-10]
Length = 300
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 153/304 (50%), Gaps = 36/304 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ + +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVNGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKL+GYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSAKYTRASNTVVNK--DGKLVGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 406
GY G L G+ L G+GGA +A G R + IF D F +A+
Sbjct: 115 --LGYVRNLIEHGVELTGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 407 LASDVMGAAR---------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 454
A+ + + P ED F+ E + AILAN T LGM P D + + ++TL
Sbjct: 173 NANYINNEMKSFGVKANLFPLEDKDAFRREVAESAILANGTSLGMKP-LDELSIIDDTLD 231
Query: 455 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
R +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P E ++
Sbjct: 232 VLRKDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVEQVK 291
Query: 513 EIVL 516
+I+
Sbjct: 292 QILF 295
>gi|429505975|ref|YP_007187159.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429487565|gb|AFZ91489.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 280
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ P++ ++ GAGGA RA+ F RG FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAI-FTTIVRG-EPKQFDV-CNRTPEKAESLIAAAP 165
Query: 417 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTIDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVEGKL 275
>gi|433444334|ref|ZP_20409253.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
gi|432001626|gb|ELK22499.1| shikimate dehydrogenase [Anoxybacillus flavithermus TNO-09.006]
Length = 276
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
K+FGLI PV HS P++HN F+ ++ + Y V+ LK+ + AGF+V
Sbjct: 3 KLFGLIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVQGLKALQCAGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM++ DE+ A+ + AVNT++ +GK +GYNTD E + A+ + +
Sbjct: 63 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCEQMN----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAA 415
L+G ++ GAGGA R + F K A + + + E+A++ A
Sbjct: 116 -------IELSGARILIIGAGGAARGIYFTLLKHEAAAIDVCNRTMEKAEAFIQKERSAV 168
Query: 416 RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
E + GA I+ N T +GM+P+ D +P+S +TL+ +V D +Y P T+ L
Sbjct: 169 YSLEQA---EERLGAYDIIINTTSVGMYPHVDTMPISLQTLKTGTIVSDIIYNPLMTKFL 225
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++A+ GA + +GV MF+ Q F +TG + M ++V+ +
Sbjct: 226 QEAKEKGARVQNGVGMFVYQGALAFEKWTGIFPNTKRMEQLVIQQL 271
>gi|154686826|ref|YP_001421987.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens FZB42]
gi|154352677|gb|ABS74756.1| AroD [Bacillus amyloliquefaciens FZB42]
Length = 280
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 417 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LK+AE G + GV MF+ QA F L+T +E MR IV+ K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVVGKL 275
>gi|47093352|ref|ZP_00231120.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|417315877|ref|ZP_12102547.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|47018271|gb|EAL09036.1| shikimate 5-dehydrogenase, putative [Listeria monocytogenes str. 4b
H7858]
gi|328465818|gb|EGF37006.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
Length = 289
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 145/293 (49%), Gaps = 37/293 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-----FVDDLKKFFSTYSSP 288
I+ T++ GLI PV HSK PI++N +F+ + Y+ V D K T+
Sbjct: 5 ISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDTPIEKVADTIKAIKTF--- 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K V+K D++ P A+ I AVNTI+ DGKL G+ TD I + D
Sbjct: 62 NLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRD 119
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
A + G+ + GAGGA A+ GA+ + IF+I +++A
Sbjct: 120 A-------------SVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKA 166
Query: 405 K----SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
K S+ +V D+ L + IL NAT +GMHPN P+S+ ++
Sbjct: 167 KQTAASIKQEVPNCIVHIYDLNDTEKLTAEIATSDILVNATLVGMHPNEHETPISDTSVF 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
R +V D +Y P+KT+LL DAEAAG V G+ M L Q + LFTGK+ P
Sbjct: 227 RKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMP 279
>gi|52549978|gb|AAU83827.1| shikimate 5-dehydrogenase [uncultured archaeon GZfos34A6]
Length = 272
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 21/284 (7%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I PV HS P++HN F+ + + +Y+ V ++L S +G +V
Sbjct: 4 IYGIIGDPVAHSLSPVMHNAAFKKLGLDAVYIAFCVPLEELGDAIRGAKSLGISGLNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P KE + F +A+ I A+NTI + GYNTD ++ +E+ + E
Sbjct: 64 PLKEKALSFV-ATEEVAKKIGAINTIDFSSTP---TGYNTDGIGALMVLEETVGE----- 114
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-AR 416
+ G+ ++ GAGGA RA++F + GA V + + R+ LAS++ A +
Sbjct: 115 --------VRGKNVLIIGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNANSI 166
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
L Q IL NAT +GMHPN D ++ + + +VFD VY P +T+LLK+A
Sbjct: 167 SLGAELKNQIRDSDILINATSVGMHPNEDATLITADLMHPDLVVFDIVYNPIETKLLKEA 226
Query: 477 EAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+ AG V+GV+M + Q FNL+T K+ P E M V A
Sbjct: 227 KRAGVKKTVNGVKMLVYQGAASFNLWTKKDPPVEVMENAVKAAL 270
>gi|443631865|ref|ZP_21116045.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347980|gb|ELS62037.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 280
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 149/290 (51%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V DDL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKGIRALGIQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F +R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARDIPKKFDICNRTLEKAKQLTEST--P 165
Query: 415 ARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
+ +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P +
Sbjct: 166 SFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LLK A G + GV MF+ QA F L+TG+E E MR IV+ +
Sbjct: 226 TALLKQANQKGLKTLDGVGMFVEQAALSFQLWTGREPDIEKMRSIVIGQL 275
>gi|375307128|ref|ZP_09772418.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375080846|gb|EHS59064.1| quinate/shikimate dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 296
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 33/303 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N +Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGLRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K ++++ DE+ A+ AVNT++ ++GKL GY+TD
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSARFTGAVNTVVN--TNGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 406
GY G L G+ L G+GGA +A A G A + IF D F RAK
Sbjct: 114 ---GYVRNLREHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARDDQFFARAKE 170
Query: 407 LA---------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 454
+ V + P ED + E I AN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHAQVKASIYPLEDQEQLREEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY+P K+RL++ AE+ GA ++G+ M L Q F L+TG+E P +F++E
Sbjct: 231 RSDLIVTDVVYSPAKSRLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVDFIKEQ 290
Query: 515 VLA 517
+ A
Sbjct: 291 LFA 293
>gi|50555858|ref|XP_505337.1| YALI0F12639p [Yarrowia lipolytica]
gi|74632651|sp|Q6C1X5.1|ARO1_YARLI RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|49651207|emb|CAG78144.1| YALI0F12639p [Yarrowia lipolytica CLIB122]
Length = 1556
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 227/532 (42%), Gaps = 74/532 (13%)
Query: 25 VLSNMYQAKAEGADVVEIRLDCINNFQ---PGKD-----LEIILTKKPLPVLIVYRPKWA 76
+ + M + +EG +E+R+D +N P ++ L I+ LP+L R K
Sbjct: 1057 IAATMLPSLSEGCSALELRVDLLNENDEAIPSEEYVLSQLAILRQNVDLPILYTVRTKAQ 1116
Query: 77 GGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILG---------KQYSSHQSGTRF 126
GG + D+ L L +L + +D EL + ++ K SH
Sbjct: 1117 GGRFPDDKPVELANLVNLGLKTAVELLDVELTYPAELVSSVGASRGYTKLLGSHHDFPGA 1176
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV-----FSVNDITEIARIFQLLSHCQV 181
+ +L+ E + +R +A D++KLV FS N E R +H
Sbjct: 1177 LNWSSLEWEN--------MYARAEAVPVDVVKLVGMAKSFSDNFALENFR----EAHTSS 1224
Query: 182 PIIAYSVGERGLVSQ----LLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHI 234
P++A ++G G +S+ LL+P + L PV P +VE + QT +
Sbjct: 1225 PLLAINMGSHGQLSRVTNTLLTPVTHADL--------PVAAAPGQLSVEEINQTRSTIGM 1276
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFST----YSSPDF 290
F ++ P+GHSK PILHN F+ + Y DD + + +
Sbjct: 1277 FNKNLSFFIVGTPIGHSKSPILHNTMFKKLGLPYEYSRFKTDDAAAVNAKARALLAQGNL 1336
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G SV P K+ ++ F DEV PLAQ I AVNTII P +G L G NTD
Sbjct: 1337 GGISVTIPLKQDIIPFLDEVSPLAQQIGAVNTIIPGP-NGTLKGDNTDI----------- 1384
Query: 351 KERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLA 408
G N FG+ L + ++ GAGG A G +S G A+++I + +A+++A
Sbjct: 1385 --LGLVNALTRFGANSLDKKTALIVGAGGTSLAAVHGLRSLGFAKILIANRTLSKAEAIA 1442
Query: 409 S--DVMGAARPFEDILN-FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
D + A + N + P AT M ++++ + LV +A Y
Sbjct: 1443 DKFDNVEAVTLDSFVANKYTPSVIVSCVPATTFSMLDESNKLVSAALAASPKGLVLEAAY 1502
Query: 466 TPRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ T LLK + G +SG+ M Q QF L+TG APKE + VL
Sbjct: 1503 SAEATPLLKQVMDVEGWEFISGLYMLTEQGFEQFRLWTGIPAPKEVGEKAVL 1554
>gi|240103652|ref|YP_002959961.1| shikimate 5-dehydrogenase [Thermococcus gammatolerans EJ3]
gi|239911206|gb|ACS34097.1| Shikimate 5-dehydrogenase (aroE) [Thermococcus gammatolerans EJ3]
Length = 272
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 140/285 (49%), Gaps = 22/285 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++A+T+++GLI P HS P +HN FR + N +Y+ V + LK
Sbjct: 1 MDAETRLYGLIGFPARHSLSPAMHNAAFRELGMNAVYLAFEVAPERLKMAVDGVRGLGIH 60
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K V++ D + A+ I +VNTI+ +DG+LIGYNTD + A+E
Sbjct: 61 GLNVTMPHKTTVIEHLDGLSGEAEEIGSVNTIV---NDGELIGYNTDGVGARRALEMVTS 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
RG KN VL G A S+ + VV+ + E+A++L
Sbjct: 118 LRG-KN--------------VLIIGAGGAGRAIAYALSKVSEVVVLNRTPEKARALERFG 162
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+ R + L +L NATP+GM N+D PV E LR+ +V D VY P KTR
Sbjct: 163 VTGDRLTPENLRRYLANADVLINATPVGM--NSDESPVPAELLREGLVVMDIVYKPLKTR 220
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
LL++AE G + V G+ M + Q F L+TGK E MR L
Sbjct: 221 LLREAERRGCVTVDGLWMLVHQGAESFRLWTGKSVDPELMRRAAL 265
>gi|56963403|ref|YP_175134.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
gi|81600933|sp|Q5WHI2.1|AROE_BACSK RecName: Full=Shikimate dehydrogenase
gi|56909646|dbj|BAD64173.1| shikimate 5-dehydrogenase [Bacillus clausii KSM-K16]
Length = 275
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 150/285 (52%), Gaps = 23/285 (8%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T+ FGLI P+GHSK P++H ++ + + +Y + +L T + GF+V
Sbjct: 2 TRQFGLIGHPLGHSKSPVMHEAAYKDMGLDAVYCAYDISPQELGNAIRTMKAQGIDGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K A++ + DE+ A+A+ AVNT++ + DG+ +G NTD + I ++ + ++
Sbjct: 62 TIPHKVAIIDYLDEIDEDAEAMGAVNTVVCQ--DGRWVGKNTDADGYIESLLPVVSDQS- 118
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA---SDVM 412
L GR ++ GAGGA RA+ + A + + + E+A+ LA S +
Sbjct: 119 ----------LTGRRVLVIGAGGAARAVIHALGKQRATISVSNRTAEKAQELAQLFSHLT 168
Query: 413 GAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
A P + + G +L N T +GM+P+T + P++ + L+ +V D +Y P +T
Sbjct: 169 IEAIPLNEA---ESTLGTYDVLINTTSVGMYPDTSKQPIALDRLKQATIVSDLIYNPYET 225
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
LL++A+ G I++G+ MF+ Q +TG++ ++ M +V
Sbjct: 226 ALLQEAKQRGNRILNGIGMFVNQGALSIEHWTGRKPNRKCMERVV 270
>gi|451822090|ref|YP_007458291.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451788069|gb|AGF59037.1| shikimate dehydrogenase AroE [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 289
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 289
+ I+ T ++ LI P+GHS P ++N +F+ + + YV + ++ +K + + + +
Sbjct: 3 KRISGTTALYCLIGTPIGHSGSPAMYNYSFQKLGIDSAYVAFDISIEKVKDTIAAFRTLN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V K+ DE+ P A+ + AVNTI+ GKL G TD
Sbjct: 63 IKGANVTMPCKNEVAKYMDELSPAARLVGAVNTIVN--DGGKLTGNITDG---------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI--DF----- 401
G+ G + + + GAGGA A+ GA+ + F+I DF
Sbjct: 111 ---VGFVRNLKEHGVDIKNKKITILGAGGAATAIQVQCALDGAKEINTFNIKDDFYKKAE 167
Query: 402 ---ERAKSLASDVMGAARPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLR 455
E + S+ + ED+ LN + IL NAT +GMHPN + P+ + R
Sbjct: 168 KTIENIRKEVSECVLNLYDLEDVKKLNEKIADSDILVNATHVGMHPNENESPIKDIRVFR 227
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D +Y PRKT+LL++AEAAG IV+G+ M L Q + F L+TG E P + + E+
Sbjct: 228 RDLVVSDVIYNPRKTKLLEEAEAAGCKIVTGIGMLLWQGVEAFKLYTGLEMPAKEVDEL 286
>gi|308174355|ref|YP_003921060.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|307607219|emb|CBI43590.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens DSM 7]
Length = 280
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 417 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSSLMRAIVEGKL 275
>gi|423084552|ref|ZP_17073052.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
gi|357552122|gb|EHJ33897.1| shikimate dehydrogenase [Clostridium difficile 050-P50-2011]
Length = 287
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 402
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRAEQ 166
Query: 403 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|423081389|ref|ZP_17069997.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
gi|357551055|gb|EHJ32859.1| shikimate dehydrogenase [Clostridium difficile 002-P50-2011]
Length = 287
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 402
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNTKDDFYKRSEQ 166
Query: 403 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|428213951|ref|YP_007087095.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
gi|428002332|gb|AFY83175.1| shikimate dehydrogenase [Oscillatoria acuminata PCC 6304]
Length = 288
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 143/293 (48%), Gaps = 29/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G+I PV HS P++HN + + +Y+P V DL + +++
Sbjct: 4 ITGTTQLLGVIGYPVKHSLSPVMHNAAITDMGVDFVYLPWPVAPSDLPTAIAGFAAIGVR 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFS+ P+K+A+M E+ P+AQA+ AVNT+ R P+ G NTD E + +
Sbjct: 64 GFSITIPHKQAIMPLLSEISPVAQAVGAVNTVWRTPTGWA--GTNTDVEGFLAPL----- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
K G + LA V+ G GGA RA+ G G A++ + + ++ ++ +
Sbjct: 117 ----KGGDRPWHQTLA----VILGCGGAARAVVAGLAQLGCAKICVVGRNLDKLQAFQTS 168
Query: 411 VMGAARP-------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE---TLRDYQLV 460
+ P + ++ P+ G +L N+TP+GM P+ PV+ + TL +
Sbjct: 169 WQDSPWPVNLSVHDWSELPQLLPQAG-LLVNSTPVGMSPDVGHSPVTPDLLATLPQGAIA 227
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+D +YTP T L+ A+A G + + G EM ++Q ++ + P + M +
Sbjct: 228 YDLIYTPSPTEFLRQAQAVGLLAIDGSEMLVQQGAAALQIWLDRPVPIDIMGQ 280
>gi|289432356|ref|YP_003462229.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452203313|ref|YP_007483446.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
gi|288946076|gb|ADC73773.1| shikimate 5-dehydrogenase [Dehalococcoides sp. GT]
gi|452110372|gb|AGG06104.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi DCMB5]
Length = 286
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH--------N 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 413
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 414 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
A+ E + N + + I+ N TP+GM + + LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESNIIVNCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKT 232
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 517
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|153953639|ref|YP_001394404.1| shikimate 5-dehydrogenase [Clostridium kluyveri DSM 555]
gi|146346520|gb|EDK33056.1| AroE3 [Clostridium kluyveri DSM 555]
Length = 289
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 151/297 (50%), Gaps = 31/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T + GLI PV HSK P+++N F +N + +Y+ V + + + +
Sbjct: 5 ISGKTGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMK 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K V+K+ DE+ P A+ I AVNTI+ +GKL G+ TD + ++++
Sbjct: 65 GSNVTMPCKSEVVKYMDELSPAARIIGAVNTIVN--DNGKLTGHITDGVGFVRSLKEE-- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + G+ + G+GGA A+ G++ + IF+I +ERA+
Sbjct: 121 -----------GVEVKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKN 169
Query: 406 --SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDY 457
++ +V D+ LN + IL NAT +GMHPN D + + ++ R
Sbjct: 170 VETIKKEVPDCTVNLYDLNDTEKLNEEVASSDILINATLVGMHPNEDESNIKDTSIFRKE 229
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT+ LK AEAAG IV G+ M L Q F L+TG E P + ++E+
Sbjct: 230 LVVADTVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGLEMPVDEIKEL 286
>gi|365891052|ref|ZP_09429522.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
gi|365333035|emb|CCE02053.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. STM 3809]
Length = 293
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 139/278 (50%), Gaps = 25/278 (8%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV+ DE+ P A A+ AVNT++ R DG+LIG+NTD A+E I G
Sbjct: 75 YPYKEAVVALLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDTTGFERAVEPLISRTG-- 130
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDV-MGA 414
GR+ L GAGG G+A+AF + G + + IFD + RA LAS + G
Sbjct: 131 -----------GRVVALIGAGGVGKAIAFALANLGVSDLRIFDTERARADKLASLLPAGP 179
Query: 415 ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
+ D + Q +GA+ + N TP+GM PN PV + LR V DAVY+P T LL
Sbjct: 180 SITVADSVE-QALQGAVGVVNGTPIGMLPNRG-TPVPDHLLRADLWVADAVYSPLWTPLL 237
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
K A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 238 KAAKAKGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|386759165|ref|YP_006232381.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
gi|384932447|gb|AFI29125.1| shikimate 5-dehydrogenase [Bacillus sp. JS]
Length = 280
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 150/290 (51%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIKALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F R + + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNSPKKFDICNRTLEKAKRLTEST--P 165
Query: 415 ARPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
+ +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P +
Sbjct: 166 SFHNKEVLSLKEAEERLEQYDVIIHTTSVGMYPNVDEVPLSLQRAASSAVVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 226 TALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRTIVIGKL 275
>gi|14520666|ref|NP_126141.1| shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|24211539|sp|Q9V1H7.1|AROE_PYRAB RecName: Full=Shikimate dehydrogenase
gi|5457882|emb|CAB49372.1| aroE shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
gi|380741199|tpe|CCE69833.1| TPA: shikimate 5-dehydrogenase [Pyrococcus abyssi GE5]
Length = 264
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 148/282 (52%), Gaps = 23/282 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
KV+GLI KPV HS P++HN FR + +YV V++L K + +G +V P
Sbjct: 2 KVYGLIGKPVSHSLSPVMHNALFRKYGIDAVYVTFEVEELGKAIDGVRALGISGLNVTMP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE V KF DE+ A+ I +VNTII +G LIGY TD + A+E
Sbjct: 62 YKEVVTKFLDELSEDAREINSVNTIIN--LEGSLIGYTTDGVGARKALERF--------- 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-DVMGAARP 417
+ + GR ++ GAGGAG+A+A+ S+ A +V+ + +AKSL V G +
Sbjct: 111 -----TEIEGRNVLILGAGGAGKAIAY-ELSKIANIVVLNRTPSKAKSLEKFGVKGGS-- 162
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
+++ N+ +L NAT +GM N VP LR +V D VY P KTRLL+DAE
Sbjct: 163 LDELPNYVGW-ADVLINATSVGMGTNESLVP--RRLLRRELIVMDIVYKPLKTRLLRDAE 219
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+ G ++ G+ M + Q F L+TG E MR + L +
Sbjct: 220 SVGCRVIDGLWMLIYQGAESFKLWTGIYPDVELMRRVSLERL 261
>gi|449109291|ref|ZP_21745927.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
gi|448959099|gb|EMB39821.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33520]
Length = 493
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 230/516 (44%), Gaps = 46/516 (8%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ L A Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--SENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
R YK G V++ G + IF+ E+AK++A +
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIA-EK 395
Query: 412 MGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
D +N + ++ T GM P+ D P++ T + VF+ +Y P
Sbjct: 396 YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVFELIYRPET 455
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
T++LK A AG + +G +M QA QF +F GKE
Sbjct: 456 TKMLKRARTAGCQVCNGYKMLEYQAYHQFKVFAGKE 491
>gi|219854261|ref|YP_002471383.1| hypothetical protein CKR_0918 [Clostridium kluyveri NBRC 12016]
gi|219567985|dbj|BAH05969.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 296
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 151/297 (50%), Gaps = 31/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T + GLI PV HSK P+++N F +N + +Y+ V + + + +
Sbjct: 12 ISGKTGLLGLIGDPVDHSKSPVMYNYGFEKLNLDYVYLAFQVPLEKVPDAITAIKTFKMK 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K V+K+ DE+ P A+ I AVNTI+ +GKL G+ TD + ++++
Sbjct: 72 GSNVTMPCKSEVVKYMDELSPAARIIGAVNTIVN--DNGKLTGHITDGVGFVRSLKEE-- 127
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + G+ + G+GGA A+ G++ + IF+I +ERA+
Sbjct: 128 -----------GVEVKGKKITIMGSGGAATAIQVQCALDGSKEISIFNIKDNFYERAQKN 176
Query: 406 --SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RDY 457
++ +V D+ LN + IL NAT +GMHPN D + + ++ R
Sbjct: 177 VETIKKEVPDCTVNLYDLNDTEKLNEEVASSDILINATLVGMHPNEDESNIKDTSIFRKE 236
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT+ LK AEAAG IV G+ M L Q F L+TG E P + ++E+
Sbjct: 237 LVVADTVYHPKKTKFLKGAEAAGCKIVGGLGMLLWQGAEAFKLYTGLEMPVDEIKEL 293
>gi|429761248|ref|ZP_19293678.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
gi|429184272|gb|EKY25295.1| shikimate dehydrogenase [Anaerostipes hadrus DSM 3319]
Length = 291
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ TK+FGLI PV HS P + N F+ +G Y+ + +++ +F + +
Sbjct: 4 RISGTTKLFGLIGSPVSHSASPAMQNYGFQACGVDGAYLAFDIKEEEVPEFVKSMRLLNI 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K A + DE+ P A+ I AVNTI+ R DGKL G+ TD E + ++D
Sbjct: 64 QGCNVTMPNKTAAAQNMDELSPAAELIGAVNTIVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 406
G + G+ V+ GAGGA A+ GA+ + IF D FERA+
Sbjct: 120 -----------HGIGVEGKDIVIFGAGGAATAIQVQCALDGAKSITIFNPRDPFFERAQK 168
Query: 407 LASDVMGAARPFE---------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
+ + + D + + + IL N T LGM P D +S+ T+
Sbjct: 169 MVEKIKAKVPECQVELYDLDAKDTMREKIDAADILVNGTLLGMKPKEDTTVISDTTMFHE 228
Query: 458 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LV D VY P +T+ L++A+ G I V G M L Q + F LFTGK+ P + ++E
Sbjct: 229 GLVVADVVYNPEETKFLREAKEHGCITVPGKGMLLWQGVASFKLFTGKDMPVDEVKE 285
>gi|73748307|ref|YP_307546.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
gi|123620202|sp|Q3ZZN3.1|AROE_DEHSC RecName: Full=Shikimate dehydrogenase
gi|73660023|emb|CAI82630.1| shikimate 5-dehydrogenase [Dehalococcoides sp. CBDB1]
Length = 286
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH--------N 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 413
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 414 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
A+ E + N + + I+ N TP+GM + + LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKT 232
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 517
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|289435577|ref|YP_003465449.1| shikimate 5-dehydrogenase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171821|emb|CBH28367.1| shikimate 5-dehydrogenase, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 289
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 4 RISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAINAIKTFNL 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 64 RGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG----------- 110
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK- 405
G+ + G +AG+ + GAGGA A+ + GA+ + IF+I +++AK
Sbjct: 111 --LGFASNLRDSGVTVAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDDFYQKAKQ 168
Query: 406 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
S+ +V D+ L + IL NAT +GMHP PV + T+
Sbjct: 169 TVASIKQEVPNCIVRIYDLNDTEKLYAEIATSNILVNATLVGMHPYESETPVKDATVFHK 228
Query: 458 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
L+ D VY P+KT+L+ DAEAAG V G+ M L Q + LFTG++ P E ++E+
Sbjct: 229 DLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVEEVKEL 286
>gi|256752529|ref|ZP_05493385.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748595|gb|EEU61643.1| shikimate 5-dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
Length = 292
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA+TK++GLI PV HS P++HN F ++ N +Y V + L++ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTVFDVLPEKLEEAVKGVKALGIR 70
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++K+ D + A I AVNT++ +G L GYNTD
Sbjct: 71 GVNVTVPHKEKIIKYLDVISEEALKIGAVNTVVNE--EGILKGYNTDV------------ 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 411 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ + D + K IL N T +GM+PNT+ P E+ + + V+D +Y
Sbjct: 176 IKKEFKIQCDYCSINEVKELPEIDILVNTTSVGMYPNTEDSPADEKVVLKAKFVYDLIYN 235
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
P +T LLK A+ G +G+ M + QA F L+TG
Sbjct: 236 PFETALLKHAKKNGIKYSNGLSMLVNQANYSFKLWTG 272
>gi|384495000|gb|EIE85491.1| hypothetical protein RO3G_10201 [Rhizopus delemar RA 99-880]
Length = 1571
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 220/516 (42%), Gaps = 55/516 (10%)
Query: 34 AEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPK-WAGGLYEG 82
EGAD VE+R+D + + G+ L ++ +PV+ R K AG +
Sbjct: 1079 CEGADAVELRVDLLKKPEEKEGISDIEYVGEQLALLRRTVSIPVIFTVRSKSQAGAFSDN 1138
Query: 83 DEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
DE E L + G +Y+D E+ + + K + Q I+S D + + D
Sbjct: 1139 DEEGMFELLRWGQRWGCEYIDVEICWNAQTIEKLVA--QKEESLIISSWHDVQKVTPWDG 1196
Query: 143 GYLVSR--MQATGADIIKLVFSVNDITEIARI--FQLLSHCQVPIIAYSVGERGLVSQLL 198
+ ++ + A DIIKLV I + ++ F+ +IA ++G G +S++L
Sbjct: 1197 KAIETKYELAAKYGDIIKLVGVAETIQDNFKLETFRASKQDGKNLIAINMGAAGQLSRVL 1256
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKPVGHSKGPIL 256
N L + P P SL + K H+ + F LI P+ HS P L
Sbjct: 1257 ----NECLTPVTHPALPQKAAPGQLSLAEINKTRHLIGLLPAQSFWLIGTPIQHSMSPTL 1312
Query: 257 HNPTFR------HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
HN F+ H ++ + +D + P F G SV P+K +VMK+ DEV
Sbjct: 1313 HNTGFQTLGLPHHYGLLECHMVEYAED-----AILKDPSFGGASVTIPHKVSVMKYLDEV 1367
Query: 311 HPLAQAIAAVNTIIRRPS------DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
A+ I AVNT+ R + + IG NTD I+ + +
Sbjct: 1368 TENAKMIGAVNTVFVRETVVNGEKKRQFIGENTDYLGMKHRIQALMMDPN--------NP 1419
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
P G ++ GAGG RA + + G + + + R S A D+ A + F +I
Sbjct: 1420 PEEG---LVIGAGGTARAALYTMQKMGIQKIYL---WNRTSSKAYDLQKAFKGFIEIEVI 1473
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-LVFDAVYTPRKTRLLKDAEAAGAII 483
+ + + + + P + + + ++ D Y PR+T+LL A+ G
Sbjct: 1474 ESLENSKIGPGVIISTVPADSGIEIPAHLYGGIKGIICDMAYKPRRTKLLLQADRKGWSC 1533
Query: 484 VSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
V G+E+ + Q I QF ++TGK+AP + E VL ++
Sbjct: 1534 VEGIEVLISQGIAQFEIWTGKKAPNHRIEEEVLRRY 1569
>gi|261402316|ref|YP_003246540.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
gi|261369309|gb|ACX72058.1| shikimate 5-dehydrogenase [Methanocaldococcus vulcanius M7]
Length = 283
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 155/289 (53%), Gaps = 27/289 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TKV GLI PV HS PI+HN F+ N +YV V + L S
Sbjct: 2 INAKTKVVGLIGHPVEHSFSPIMHNTAFKDKKLNYVYVAFDVLPEHLGDAIKGAKSLGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K VMK+ DE+ A+ I AVNT+ + +GK IGYNTD + A+E+ I
Sbjct: 62 GFNITIPHKIEVMKYLDEIDKDAKLIGAVNTV--KIDNGKAIGYNTDGIGARRALEEEIG 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E + G+ V+ GAGGAGRA+AF ++ R++I + E+AK+LA ++
Sbjct: 120 E-------------VKGKNIVVYGAGGAGRAVAFEL-AKNNRIIIANRTIEKAKNLAKEI 165
Query: 412 -------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 463
G F D LN I+ NATP+GM+PN D P V + LR+ +V D
Sbjct: 166 AEKLNKKFGEEVKFSD-LNVDLSDVDIVINATPIGMYPNVDVEPIVKADKLREDMVVMDL 224
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
VY P +T LLK+A+ A A ++G+ M + Q F ++TG E E MR
Sbjct: 225 VYNPLETVLLKEAKKANAKAINGLGMLIHQGAVAFKIWTGVEPNVEVMR 273
>gi|392941090|ref|ZP_10306734.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
gi|392292840|gb|EIW01284.1| shikimate 5-dehydrogenase [Thermoanaerobacter siderophilus SR4]
Length = 292
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 138/279 (49%), Gaps = 24/279 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA+TK++GLI PV HS P++HN F ++ N +Y V + L+ +
Sbjct: 11 INANTKLYGLIGHPVEHSLSPLIHNYAFNSLDLNCVYTAFDVLPEKLEDAVKGAKALGIK 70
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+KE ++K+ D V A I AVNT++ G L GYNTD
Sbjct: 71 GFNVTVPHKEKIIKYLDVVSEEALKIGAVNTVVNE--GGILKGYNTDV------------ 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + G + GR V+ GAGGA +A+ +G ++I + ERAK L+
Sbjct: 117 -YGFIDSLTEVGEKIEGRKAVVLGAGGASKAVCVALALKGIDSIIIANRSVERAKDLSEY 175
Query: 411 VMGAARPFEDILNFQ-----PEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
+ + D + PE +L N T +GM+PN + PVSE + + V+D +Y
Sbjct: 176 IKREFKIQCDYCSINEVEEIPEID-MLVNTTSMGMYPNVEDSPVSERVVSKAKFVYDLIY 234
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
P +T LK A+ G +G+ M L QA F L+TG+
Sbjct: 235 NPFETTFLKHAKKNGIKYSNGLFMLLNQANYSFKLWTGE 273
>gi|126700322|ref|YP_001089219.1| shikimate 5-dehydrogenase [Clostridium difficile 630]
gi|115251759|emb|CAJ69594.1| Shikimate dehydrogenase 2 [Clostridium difficile 630]
Length = 287
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK- 405
GY G + G+ + GAGGA A+ GAR + IF D ++RA+
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQ 166
Query: 406 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|340624235|ref|YP_004742688.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
gi|339904503|gb|AEK19945.1| shikimate 5-dehydrogenase [Methanococcus maripaludis X1]
Length = 278
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 158/294 (53%), Gaps = 25/294 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ TK+ GLI PV HS P++HN + + N Y V ++LK + + +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPLMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNITIPHKMNIMKYLDEIDSDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEE--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
K G L + ++ G+GGA RA++F ++ + I + + E+A++L+ ++
Sbjct: 117 ----KTGI------LYDKNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 412 MGAARPFEDILNF-----QPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVY 465
G + E+ LN+ E I+ N TP+GM+P+T+ PV ++ +V D +Y
Sbjct: 166 SGKLKK-ENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIY 224
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P + LK+A+ GA ++G+ M + Q F ++TG + M++ +++K
Sbjct: 225 NPLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGVKPDIYVMKKSIISKI 278
>gi|254976300|ref|ZP_05272772.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-66c26]
gi|255093686|ref|ZP_05323164.1| shikimate 5-dehydrogenase [Clostridium difficile CIP 107932]
gi|255315436|ref|ZP_05357019.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-76w55]
gi|255518101|ref|ZP_05385777.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-97b34]
gi|255651217|ref|ZP_05398119.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-37x79]
gi|260684282|ref|YP_003215567.1| shikimate 5-dehydrogenase [Clostridium difficile CD196]
gi|260687941|ref|YP_003219075.1| shikimate 5-dehydrogenase [Clostridium difficile R20291]
gi|384361925|ref|YP_006199777.1| shikimate 5-dehydrogenase [Clostridium difficile BI1]
gi|260210445|emb|CBA64887.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
CD196]
gi|260213958|emb|CBE06042.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile
R20291]
Length = 287
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 402
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGIEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 403 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|157693067|ref|YP_001487529.1| shikimate 5-dehydrogenase [Bacillus pumilus SAFR-032]
gi|157681825|gb|ABV62969.1| shikimate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 280
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 24/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I PVGHS P +HN + +G Y V DDLK + + +GF+V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAINGMKALGISGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +M++ D++ A+ + AVNT+ R +G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEEGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID---FERAKSLASDVMGA 414
PL F+L GAGGA RA+ + FDI E+A++L G
Sbjct: 117 -------PLTELSFLLIGAGGAARAIYTTIADYAPKS--FDITNRTIEKAEALIKSADGN 167
Query: 415 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
L E+ ++ + T +GMHPN + P+S + +V D VY P +T+
Sbjct: 168 ITSSAITLKTAEEQLGEYDVIIHTTSIGMHPNVEETPISLANAKKTAVVCDIVYNPIETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL++A G V GV MF+ QA F L+TG M+ IV+ K
Sbjct: 228 LLREAAGLGLKTVDGVGMFVGQAARAFELWTGITPDVRKMKSIVIQKL 275
>gi|194016640|ref|ZP_03055254.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194012113|gb|EDW21681.1| shikimate dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 300
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 36/304 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNP--TFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
+I+ TK+ GL++ P+GHS P +HN T +NY + + D+L+ +
Sbjct: 8 NIDGKTKLVGLLATPIGHSLSPRMHNLGYTLTGINYAYLAFEVGNDELEAAVYGMKAMGA 67
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+ + DE+ A+ A NT++ + DGKLIGYNTD
Sbjct: 68 AGFNVSMPNKMKVLDYLDELDDSARYTRASNTVVNK--DGKLIGYNTDG----------- 114
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKS 406
GY G LAG+ L G+GGA +A G R + IF D F +A+
Sbjct: 115 --LGYVRNLIEHGVELAGQKVTLVGSGGAATPIAIQLAQSGIREISIFARNDQYFVQAEE 172
Query: 407 LASDVMGAAR---------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL- 454
+ + + P ED F+ E + AILAN T LGM P D++ + ++TL
Sbjct: 173 NVTYINEEMKSFGVKANIFPLEDKDAFRREVAESAILANGTSLGMKP-LDQLSIIDDTLD 231
Query: 455 --RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
R+ +V D VY P+KT+LL A+ AGA ++G+ M L Q + LFTG++ P + ++
Sbjct: 232 VLREDLIVTDVVYNPQKTKLLAQAQEAGAKTINGLGMMLWQGALAYKLFTGEDMPVDQVK 291
Query: 513 EIVL 516
+I+
Sbjct: 292 QILF 295
>gi|158336295|ref|YP_001517469.1| shikimate 5-dehydrogenase [Acaryochloris marina MBIC11017]
gi|158306536|gb|ABW28153.1| shikimate 5-dehydrogenase, putative [Acaryochloris marina
MBIC11017]
Length = 292
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 141/305 (46%), Gaps = 34/305 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTF--------RHVNYNGIYVPMFVDDLKKFFST 284
I TK+ G++ PV HS P++HN R + Y I +P+ L S+
Sbjct: 3 QITGATKLLGVMGHPVEHSLSPVMHNAALQALATQQHRFLEYVYIPLPVTAHALPAVVSS 62
Query: 285 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 344
GF++ P+K+A+M E +A+A+ AVNT+ P+D G NTD E ++
Sbjct: 63 LRELGCCGFNITIPHKQAIMPLLTETTAIAKAVGAVNTV--WPTDDGWAGTNTDVEGFLS 120
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DID 400
++ R + T + G GGA RA+ G G V
Sbjct: 121 PLQPL--NRDWSTITPC-----------ILGCGGAARAVLAGCAQLGCLQVHIIGRQPAK 167
Query: 401 FERAKSLASDVMG---AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETL 454
E KS + + +ED+ P+ A+L N TP+GM P+ P+S + L
Sbjct: 168 LEHLKSTCATTLSIDIQIHLWEDLAPLLPQ-AALLINTTPVGMSPHIQASPLSAVEIDQL 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V+D +YTP T LLK +A+G I ++GVEM ++Q +L+ + AP + MRE
Sbjct: 227 PKEAIVYDLIYTPNPTVLLKQTQASGRIAITGVEMLVQQGAAALSLWIDQPAPVDIMREA 286
Query: 515 VLAKF 519
+LA F
Sbjct: 287 LLACF 291
>gi|145577921|gb|ABP82679.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKAAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|210615766|ref|ZP_03290747.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
gi|210150102|gb|EEA81111.1| hypothetical protein CLONEX_02965 [Clostridium nexile DSM 1787]
Length = 292
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 30/296 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GL+ PV HS P++HN F+ + + Y+ V D LK + +
Sbjct: 7 QITGHTRLTGLLGSPVEHSISPMMHNEAFQQLGLDYAYLAFDVGTDKLKTAVEGLRTLNV 66
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P K + CD++ P A+ I AVNT++ +G LIGY TD + A++DA
Sbjct: 67 RGFNLTMPDKNLMCSLCDKLSPAAEIIGAVNTVVN--DNGVLIGYTTDGVGYMHAVKDA- 123
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 406
G + G+ L GAGGA A+ A G + + +F++ F RA+
Sbjct: 124 ------------GHNIIGKKMTLLGAGGAATAILVQAALDGVSEISVFNVRDDFFARAEK 171
Query: 407 LASDVM----GAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ 458
+D+ R F+ DIL + + AIL N T +GM P+TD + + ++
Sbjct: 172 TVADLNERTNCKVRLFDFENPDILKREISESAILTNGTSVGMSPDTDACIIKDTSVFHKD 231
Query: 459 LVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
L+ D +Y P +T+LL+ A+ AG +G+ M L Q F L+TGKE P ++E
Sbjct: 232 LIVSDVIYNPEETKLLRLAKEAGCPTFNGLYMLLYQGAEAFRLWTGKEMPIPVIKE 287
>gi|452204749|ref|YP_007484878.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
gi|452111805|gb|AGG07536.1| shikimate 5-dehydrogenase [Dehalococcoides mccartyi BTF08]
Length = 286
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FG+I PV HS P + N F+H N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSVSPAMQNAAFKHCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K ++K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEIIKYIDTLDPAAKKIGAVNTIVNE--NGQLKGYNTDFGGFVRLLEH--------N 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 413
A A F L GAGG+ A++ + G + + E+AK LA+ + G
Sbjct: 118 RIAP-----AKHRFALLGAGGSAHAISLAICTLGGHLTVLARQEEKAKDLAAKMCLRFKG 172
Query: 414 AARPFE-DILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
A+ E + N + + I+ N TP+GM + + LR V DA+Y P KT
Sbjct: 173 KAQGLELNEANLEETLAESDIIVNCTPIGMGNLAGQSLIPPRLLRPDLTVIDAIYNPCKT 232
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 517
RLL+DAE GA I++G+EM + Q F ++T ++AP + M+E +A
Sbjct: 233 RLLEDAEKKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAEMA 280
>gi|347549627|ref|YP_004855955.1| putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982698|emb|CBW86717.1| Putative oxidoreductase [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 289
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T++ LI PV HSK PI++N +F+ + Y+ + V + + + +
Sbjct: 4 RISGSTRLLSLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAFDIPVTKVADAITAMKTFNL 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K V+K+ D++ P A+ I AVNTII DGKL G+ TD
Sbjct: 64 RGSNVTMPCKSEVLKYMDDLSPAARMIGAVNTIINE--DGKLTGHITDG----------- 110
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAKS 406
G+ + G +AG+ + GAGGA A+ + GA+ + IF+I +++AK
Sbjct: 111 --LGFASNLRDSGVDIAGKKMTIIGAGGAATAIQVQSALDGAKEIAIFNIKDNFYQKAKQ 168
Query: 407 LAS-------DVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDY 457
+ D + D E IL NAT +GMHP + PV + T+
Sbjct: 169 TVTSIKKEVPDCIVHIYDLNDTEKLYAEIATSDILVNATLVGMHPYENETPVKDATIFSK 228
Query: 458 QLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
L+ D VY P+KT+L+ DAEAAG V G+ M L Q + LFTG++ P ++E+
Sbjct: 229 DLIVADVVYNPKKTKLMLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGEDMPVSEVKEL 286
>gi|289578257|ref|YP_003476884.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|297544537|ref|YP_003676839.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289527970|gb|ADD02322.1| shikimate 5-dehydrogenase [Thermoanaerobacter italicus Ab9]
gi|296842312|gb|ADH60828.1| shikimate 5-dehydrogenase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 284
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 142/281 (50%), Gaps = 28/281 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 290
IN+ TK+FGLI PV HS P++HN F+ +N N +Y +F + L+ +
Sbjct: 2 EINSKTKLFGLIGHPVEHSLSPLIHNYAFKSLNLNYVYTVFDVFPEKLEDAVKGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE ++K+ D V A I AVNT++ +G L GYNTD
Sbjct: 62 KGVNVTIPHKEKIIKYLDVVSEEALKIGAVNTLVNE--EGILKGYNTDV----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLAS 409
G+ + G + G+ V+ GAGGA +A+ A + +VI + + E+AK L+
Sbjct: 109 --YGFIDSLTEVGEKIKGKKAVVLGAGGASKAVCVALALEKINEIVIANRNVEKAKELSE 166
Query: 410 DVMGAARPFEDILNF----QPEK---GAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
+ R F+ N+ + EK IL N T +GM+PN + PV E+ + + V+D
Sbjct: 167 YI---KREFKVSCNYCSINEVEKIPEMDILVNTTSVGMYPNVEDSPVCEKVVSRAKFVYD 223
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+Y P +T LK A+ G +G+ M + QA F L+TG
Sbjct: 224 VIYNPFETVFLKYAKRNGIKYSNGLSMLVNQANYSFKLWTG 264
>gi|270307833|ref|YP_003329891.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
gi|270153725|gb|ACZ61563.1| shikimate 5-dehydrogenase [Dehalococcoides sp. VS]
Length = 286
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 25/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FG+I PV HS P + N F++ N +Y+ + +DL+ ++ + G +V
Sbjct: 8 LFGIIGYPVSHSISPAMQNAAFKYCKLNYLYLTIAAKPEDLQNVIASMRPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDVLDPAAKKIGAVNTIVNE--NGVLKGYNTDFGGFVRLLE--------HN 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 413
A A F L GAGG+ A+A + G R+ + E+AK LAS + G
Sbjct: 118 RIAP-----AKHCFALLGAGGSAHAIALAICTLGGRLTVLARQEEKAKDLASKMCLRFNG 172
Query: 414 AARPFE-DILNFQP--EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
A+ E + N + + I+ N TP+GM + V LR V DA+Y P KT
Sbjct: 173 KAQGLELNDTNLEEVLAETDIIVNCTPVGMGNLAGQSLVPARFLRPDLTVIDAIYNPCKT 232
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 517
RLLK+AE GA I++G+EM + Q F ++T ++AP + M+E LA
Sbjct: 233 RLLKEAENKGAKIINGLEMLVWQGAMSFEIWTSQKAPFRVMMKEAELA 280
>gi|452856329|ref|YP_007498012.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080589|emb|CCP22352.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 280
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPRHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 417 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVEGKL 275
>gi|375363099|ref|YP_005131138.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384266178|ref|YP_005421885.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385265565|ref|ZP_10043652.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387899199|ref|YP_006329495.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|421730915|ref|ZP_16170041.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346228|ref|YP_007444859.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
gi|371569093|emb|CCF05943.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380499531|emb|CCG50569.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385150061|gb|EIF13998.1| shikimate 5-dehydrogenase [Bacillus sp. 5B6]
gi|387173309|gb|AFJ62770.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|407075069|gb|EKE48056.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849986|gb|AGF26978.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
Length = 280
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALQDKNINGQYFAFQVEPHHLKDAVNGIKALGICGVNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+H A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIHESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ P++ ++ GAGGA RA+ R + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRREPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 417 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F+ Q E+ ++ + T +GM+P TD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLKEAENQLEQYDVIIHTTSVGMYPKTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LK+AE G + GV MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGVGMFVEQAALSFKLWTEQEPDSGLMRAIVEGKL 275
>gi|409994164|ref|ZP_11277283.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
gi|409934994|gb|EKN76539.1| shikimate 5-dehydrogenase [Arthrospira platensis str. Paraca]
Length = 285
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++ +
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDVAGFLAPLKALNR 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQS 167
Query: 411 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 461
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLNSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|145577949|gb|ABP82693.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tohokuensis]
Length = 238
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 134/254 (52%), Gaps = 30/254 (11%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K ++MK+ D
Sbjct: 1 SLSPLMHNDAFEHLNIDAHYHAFLVEEETLGEAVKGLKALGVSGFNVTTPHKVSIMKYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R D KLIGYNTD + +++ KE PL
Sbjct: 61 EIDPLAKQIGAVNTVVHR--DRKLIGYNTDGIGYVRSLQSISKE------------PLYQ 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL--------ASDVMGAARPFE 419
+ +L GAGGA RA+ F G + + I + E+A L S + R E
Sbjct: 107 KRILLLGAGGACRAIYFSLADAGVKEIDIANRTVEKANHLLSGCQAKITSQALSLERATE 166
Query: 420 DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAA 479
+ N+ I+ + T +GMHP+ P+ +L+ +V D +Y P +T+LL+DA+A
Sbjct: 167 EQGNYD-----IIIHTTTIGMHPHIQNTPLQIRSLKQGTIVSDIIYNPFETKLLQDAKAK 221
Query: 480 GAIIVSGVEMFLRQ 493
GAI+ +G++MF+ Q
Sbjct: 222 GAIVQNGIDMFVYQ 235
>gi|449123706|ref|ZP_21760028.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
gi|448943959|gb|EMB24841.1| shikimate 5-dehydrogenase [Treponema denticola OTK]
Length = 493
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 231/516 (44%), Gaps = 46/516 (8%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRLE------ALHLAEDL-GADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ A A+ + Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
R YK G V++ G + IF+ E+AK++A +
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIA-EK 395
Query: 412 MGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
D +N + ++ T GM P+ D P++ T + VF+ +Y P
Sbjct: 396 YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVFELIYRPET 455
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
T++LK A AG + +G +M QA QF F GKE
Sbjct: 456 TKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 491
>gi|225027299|ref|ZP_03716491.1| hypothetical protein EUBHAL_01555 [Eubacterium hallii DSM 3353]
gi|224955382|gb|EEG36591.1| shikimate dehydrogenase [Eubacterium hallii DSM 3353]
Length = 286
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 26/293 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ +TK+ L+ P+ S + N + N IY V++ L + +FA
Sbjct: 4 VDINTKMITLLGDPLKQSFAAQMQNCGYEAAGLNMIYFYTEVNNEHLADVVNGIRYMNFA 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K V+++ DE+ PL + + A NT+++ P +GKL+GYNTD I ++E
Sbjct: 64 GFAVTKPNKVKVLEYLDELDPLCEKMGASNTVVKTP-EGKLVGYNTDGIGFIRSME---- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
++G ++ G+GGAGRA+ GA+ + I D+ E +KSL D
Sbjct: 119 ----RDGNVKIDE----NIYFCIGSGGAGRAMCSALAYYGAKKIYITDVFEESSKSLVED 170
Query: 411 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
+ + F + F P ++ ++ NA+ +GM + P+ +E + Q FDA
Sbjct: 171 I---NKNFAPVAEFCPAGDFSKVKEATVVLNASGIGMGSHIGENPLPKEFISKDQFYFDA 227
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
Y P KT+ L DAE AGA I++G+ M L Q Q +TG+E P E MR+ +L
Sbjct: 228 CYNPAKTQFLLDAEEAGATILNGLGMSLYQGAAQIEYWTGQEPPIEAMRQKLL 280
>gi|449095061|ref|YP_007427552.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
gi|449028976|gb|AGE64215.1| shikimate 5-dehydrogenase [Bacillus subtilis XF-1]
Length = 280
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLENAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 415 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|428775357|ref|YP_007167144.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
gi|428689636|gb|AFZ42930.1| shikimate dehydrogenase [Halothece sp. PCC 7418]
Length = 283
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 28/292 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ + +Y+P+ V DL++ + +++ D
Sbjct: 2 ITGKTKLLGVIGDPVEHSLSPVMHNAVLNHLGLDYVYLPLPVKKGDLERALAGFTAIDLV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ + + + P AQ + AVNT+ R ++ G NTD + I ++
Sbjct: 62 GFNATIPHKQAIIPYLNRITPEAQQVGAVNTVWR--TEAGWEGTNTDVDGFIAPLKSL-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ + N T V+ G GGA RA+ G G + + + + E+ + S
Sbjct: 118 DQDWSNITP-----------VILGNGGAARAVIVGCAKLGCSEIAVVGRNQEKLEQFKSS 166
Query: 411 -----VMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLVF 461
V A + + + L + +L N TP+GM P+ D PV E L++ + +
Sbjct: 167 WANTGVSAAIKTYLWEELPHLVSQTQLLVNTTPIGMSPDADASPVEREILKELPNCAIAY 226
Query: 462 DAVYTPRKTRLLKDAE-AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
D +YTPR TRLL+ A+ A A+ G+EM ++Q ++ + P E MR
Sbjct: 227 DLIYTPRPTRLLQLAQDNANAVTFDGLEMLIQQGAAALEIWLQQPIPVEIMR 278
>gi|392989569|ref|YP_006488162.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
gi|392336989|gb|AFM71271.1| shikimate 5-dehydrogenase [Enterococcus hirae ATCC 9790]
Length = 287
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 36/298 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ G +KP HS P++HN F H + +Y+ VD +L++ + + D
Sbjct: 2 ISGKTKLTGFFAKPASHSLSPLMHNLAFSHWGIDAVYLAFEVDQTNLRQAVESIRTLDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K AV+ + D++ P A+ I AVNTI+ + + +LIGYNTD + ++ +
Sbjct: 62 GVNVSMPNKTAVLAYLDQLSPEAELIGAVNTIVHQ--EQRLIGYNTDGMGFVRSVNET-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL---- 407
G P+ + V+ GAGGA +A+ GA+ + ++R +
Sbjct: 118 -----------GHPIKNQKIVVLGAGGAAKAIVVQMALEGAQEITI---YKRLNATFLPL 163
Query: 408 ------ASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD 456
S+ G D L + +L NAT +GM D++P+++ L
Sbjct: 164 KEYFVKVSEKTGCPIRLHDYADESQLALDLSQANLLINATDIGMGSKKDQLPIADVKLLH 223
Query: 457 YQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
QL VFD +Y+P +TRL+++A+ G +G+ M + Q F L+T +E P + +RE
Sbjct: 224 SQLAVFDLIYSPSETRLIQEAKKMGIKAYNGLGMLIHQGAIAFELWTHREMPVQNIRE 281
>gi|449115970|ref|ZP_21752430.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
gi|449119976|ref|ZP_21756363.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|449122373|ref|ZP_21758713.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948129|gb|EMB28967.1| shikimate 5-dehydrogenase [Treponema denticola MYR-T]
gi|448948596|gb|EMB29430.1| shikimate 5-dehydrogenase [Treponema denticola H1-T]
gi|448955456|gb|EMB36223.1| shikimate 5-dehydrogenase [Treponema denticola H-22]
Length = 493
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 229/516 (44%), Gaps = 46/516 (8%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ L A Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
R YK G V++ G + IF+ E+AK++A +
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIA-EK 395
Query: 412 MGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
D +N + ++ T GM P+ D P++ T + VF+ +Y P
Sbjct: 396 YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVFELIYRPET 455
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
T++LK A AG + +G +M QA QF F GKE
Sbjct: 456 TKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 491
>gi|312127119|ref|YP_003991993.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
gi|311777138|gb|ADQ06624.1| shikimate 5-dehydrogenase [Caldicellulosiruptor hydrothermalis 108]
Length = 281
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 39/291 (13%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFSVGFP 298
LI K + HS P +HN + + IY + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNTILSEFDIDAIYSNLELSDTEKLKEFVEMVRKDKDVVGFNITIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +++FCDEV + I A NT+ + DGK + YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEDGKFLAYNTDW-------------IGFKKS 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARP 417
G + + ++ G+GGA +A +G GA+ V I + +E+A++L +
Sbjct: 111 LEDRGGDVKDKKILILGSGGAAKACIYGLYRMGAKEVFIANRTYEKAQALR-------QQ 163
Query: 418 FEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLR-DYQLVFDAVYTPR 468
+++I++ + K + IL N TP+GM+P+ D P++ TL +LV+D +Y P
Sbjct: 164 YKEIVDLKIIKWSEIENVSYDILINTTPIGMYPDVDISPIN--TLNFTVELVYDMIYNPY 221
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI-VLAK 518
KT+LL+ AE G I++G+ M + QAI ++ G E KE + I LAK
Sbjct: 222 KTKLLQLAEINGKKILNGLPMLIYQAIEAEKIWFGIEPDKEMVSLIHTLAK 272
>gi|376007198|ref|ZP_09784399.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
gi|375324390|emb|CCE20152.1| Shikimate dehydrogenase [Arthrospira sp. PCC 8005]
Length = 285
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++D
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDQGWSGTNTDVAGFLAPLKDLNF 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQS 167
Query: 411 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 461
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLHSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|145577937|gb|ABP82687.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar bolivia]
gi|145577943|gb|ABP82690.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|319938856|ref|ZP_08013220.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
gi|319811906|gb|EFW08172.1| shikimate dehydrogenase [Streptococcus anginosus 1_2_62CV]
Length = 284
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DEV P AQ I AVNT++ + GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ V+ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VITGKKMVMLGAGGAATAIIIQAVLDGAEEIFVFTRQSSFERVSQKM 165
Query: 409 SDVM--GAAR----PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
++ AA+ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTAAKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A+ +V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQDVEVVNGLGMLLYQAAEAFKLWTGKEMPTKKIWQTLEKKY 283
>gi|209524414|ref|ZP_03272963.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
gi|209495205|gb|EDZ95511.1| shikimate 5-dehydrogenase [Arthrospira maxima CS-328]
Length = 285
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGVQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++D
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDVAGFLAPLKDLNF 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQS 167
Query: 411 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 461
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLHSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|221310491|ref|ZP_03592338.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|221314815|ref|ZP_03596620.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319737|ref|ZP_03601031.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324015|ref|ZP_03605309.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767590|ref|NP_390444.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|418032255|ref|ZP_12670738.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|430756355|ref|YP_007208894.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915012|ref|ZP_21963638.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
gi|251757241|sp|P54374.2|AROE_BACSU RecName: Full=Shikimate dehydrogenase
gi|225185218|emb|CAB14508.2| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
168]
gi|351471118|gb|EHA31239.1| shikimate 5-dehydrogenase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959814|dbj|BAM53054.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|407965389|dbj|BAM58628.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7003]
gi|430020875|gb|AGA21481.1| Shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115360|gb|EME05756.1| shikimate dehydrogenase [Bacillus subtilis MB73/2]
Length = 280
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 415 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVIGKL 275
>gi|398307025|ref|ZP_10510611.1| shikimate 5-dehydrogenase [Bacillus vallismortis DV1-F-3]
Length = 280
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGYYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMNYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG--ARVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F +R + I + E+AK L +
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIARDIPKKFDICNRTLEKAKQLTE----S 163
Query: 415 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
A F +++L+ E+ ++ + T +GM+PN + P+S + +V D VY P
Sbjct: 164 APSFHNKEVLSMTEAEKRLEQYDVIIHTTSVGMYPNVEDAPLSLQHAASCAVVCDIVYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T LLK+A G + GV MF+ QA F L+TGKE E MR IV+ K
Sbjct: 224 IQTALLKEANQNGLKTLDGVGMFVEQAALSFQLWTGKEPDIEKMRSIVIGKL 275
>gi|449107487|ref|ZP_21744141.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451969179|ref|ZP_21922408.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
gi|448961687|gb|EMB42382.1| shikimate 5-dehydrogenase [Treponema denticola ASLM]
gi|451702047|gb|EMD56481.1| shikimate 5-dehydrogenase [Treponema denticola US-Trep]
Length = 493
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 229/516 (44%), Gaps = 46/516 (8%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ L A Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEAARAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQLLSHC 179
+ I S L + P + ++ V + DI KL F+ +ND++E+ + +L+ +
Sbjct: 118 DIKIIRS--LHSKVPIK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKLIKNQ 174
Query: 180 QVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
+ I +G GL S++LS K N +VY K L E+L + Y I
Sbjct: 175 EY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ + G S
Sbjct: 233 DEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFLNEKD 350
Query: 353 -RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
R YK G V++ G + IF+ E+AK++A +
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIA-EK 395
Query: 412 MGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
D +N + ++ T GM P+ D P++ T + VF+ +Y P
Sbjct: 396 YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVFELIYRPET 455
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
T++LK A AG + +G +M QA QF F GKE
Sbjct: 456 TKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 491
>gi|411120996|ref|ZP_11393368.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
gi|410709665|gb|EKQ67180.1| shikimate dehydrogenase [Oscillatoriales cyanobacterium JSC-12]
Length = 286
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 33/295 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ P+ HS PI+HN + + +Y+P V +DL + + +++
Sbjct: 2 ITGTTKLLGVVGHPIEHSLSPIMHNAAIAQLGVDYVYLPFPVKPEDLSQALAGFAAIGVQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+++M+ ++ PLAQA+ AVNT+ R S+ G NTD
Sbjct: 62 GFNVTIPHKQSIMRLLSDISPLAQAVGAVNTVWR--SETGWHGTNTDVA----------- 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
G+ S + + ++ G GGA RA+ G G RV + D RAK
Sbjct: 109 --GFLAPLRSLRADWSQTEVLILGIGGAARAVVAGCAELGCTRVRVVGRD--RAKLEQFQ 164
Query: 411 VMGAARP---------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ--- 458
A P +E + + P G I+ N TP+GM PN D+ P+S E + Q
Sbjct: 165 HSWAHSPIMVNLQTHLWEALPSLLPMAGLIV-NTTPIGMFPNVDQSPISLEYILHLQPGT 223
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+ +D +YTP TR L+ A GAI + G+EM ++Q L+ + P + MR
Sbjct: 224 IAYDLIYTPSPTRFLQYAAEHGAITLDGLEMLVQQGAAALELWLQESVPVDVMRR 278
>gi|449131376|ref|ZP_21767592.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
gi|448940209|gb|EMB21120.1| shikimate 5-dehydrogenase [Treponema denticola SP37]
Length = 493
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 230/520 (44%), Gaps = 54/520 (10%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----L 65
+T +C L +++E+ LS + + K + D+ E+R+D +N + + L P +
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEI-----LYLRNFPERAGI 55
Query: 66 PVLIVYRPKWAGGLYEGDEHKRL----EALHLAED---LGADYVDFELKVASNILGKQYS 118
P ++ R K GG + G E R+ L A Y+D E S+ G + +
Sbjct: 56 PCILTVRRKSDGGNFTGGEGARMTIFARGLAFANSDPIKNFSYIDLESDFDSS--GIEEA 113
Query: 119 SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQL 175
+ + I S L + P + ++ V + DI KL F+ +ND++E+ + +L
Sbjct: 114 ARAFDIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKL 170
Query: 176 LSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYK 230
+ + + I +G GL S++LS K N +VY K L E+L + Y
Sbjct: 171 IKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEELYG 228
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
I+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ +
Sbjct: 229 FSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKI 288
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G SV P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + +
Sbjct: 289 KGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--AENKKWFGYNTDVDGFQQALMEFL 346
Query: 351 KE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 407
E R YK G V++ G + IF+ E+AK++
Sbjct: 347 NEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KAYIFNRTAEKAKNI 392
Query: 408 ASDVMGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
A + D +N + ++ T GM P+ D P++ T + VF+ +Y
Sbjct: 393 A-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVFELIY 451
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
P T++LK A AG + +G +M QA QF F GKE
Sbjct: 452 RPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 491
>gi|423063524|ref|ZP_17052314.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
gi|406714956|gb|EKD10114.1| putative shikimate 5-dehydrogenase [Arthrospira platensis C1]
Length = 285
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 26/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVTPDQLASAYRGFQAIGVQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD + ++D
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDVAGFLAPLKDLNF 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 120 PNWHE------------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFRQS 167
Query: 411 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 461
+ + P + ++ N+Q + +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLHSPLPIKVNVHNWQELNPLIRQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|366166816|ref|ZP_09466571.1| shikimate dehydrogenase [Acetivibrio cellulolyticus CD2]
Length = 294
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 25/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
+ T++ GLI PV HS P LHN + + +YVP+ VD +L+ + DF
Sbjct: 7 VTGKTRLLGLIGNPVEHSVSPQLHNSLSLLLGLDLLYVPLKVDKENLEVVVKALKAVDFV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V PYK +MKF D+ A + +VNT+ + +G+L GYNTD E + A ++A
Sbjct: 67 GFNVTIPYKRDIMKFIDDNTKEAILMGSVNTV--KKIEGRLYGYNTDGEGFLRAFKEAA- 123
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ G+ V+ GAGGA R +A GA ++ I + +++ LA
Sbjct: 124 -----------GTGFKGKKVVMIGAGGAARPIAVKIAMDGAEKISIVNRTTQKSVELAEV 172
Query: 411 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFD 462
V + NF+ E+ I+ N T +GM P+ D+ P+ + R Q+V+D
Sbjct: 173 VNENVAEIVQVYNFEDKTLKMAFEESDIIINTTSVGMSPDIDKSPIENIDYFRSGQIVYD 232
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
VY P KT+ L DAE+ G + G+ M Q I + ++TG + ++ +++I
Sbjct: 233 IVYNPSKTKFLADAESRGCKAIGGLGMLFYQGINSYEIWTGVKFSEKDLKDI 284
>gi|319651634|ref|ZP_08005761.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
gi|317396701|gb|EFV77412.1| shikimate 5-dehydrogenase [Bacillus sp. 2_A_57_CT2]
Length = 279
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 31/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+ HS P +HN F + + Y + ++L + + AGF+V
Sbjct: 3 KLFGVIGDPISHSMSPAMHNDLFAAYSLDAHYQAFHISRENLTDAIIGFRAMGIAGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ DE+ PLA+AI AVNT++ + GKLIGYNTD GY
Sbjct: 63 VPHKEAIIPLLDELDPLAEAIGAVNTVVNQ--TGKLIGYNTDGS-------------GYV 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAA 415
G + + + ++ GAGGA RA+ F G ++ I + +RA+ + +D
Sbjct: 108 KGLLNQKQSIKDKKVLIVGAGGAARAIYFTIAKEGPELLDICNRTPKRAEQIINDC---- 163
Query: 416 RPFE---DILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
PF +L+ +G++ + T +GMHP + P+S L+ V D +Y P
Sbjct: 164 -PFRVPARVLSRPDAEGSLETYDLIVQTTSIGMHPEIGQSPLSVHKLKPGAFVSDIIYNP 222
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T+LL +A GA I +G++MF+ Q F ++TG E MR VL +
Sbjct: 223 LETKLLTEAAEKGAGIQNGIDMFVYQGALAFEMWTGIGPDIERMRHKVLNQL 274
>gi|304314453|ref|YP_003849600.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
gi|302587912|gb|ADL58287.1| shikimate 5-dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
Length = 297
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 155/291 (53%), Gaps = 24/291 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I +T++ G+I P+ HS P +HN F+ + + YVP V L++ + +
Sbjct: 17 ITGNTQLTGIIGYPLTHSLSPQMHNAAFKALGMDWAYVPFPVKPSGLEEAVRGLRALNVR 76
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE+V+++ EV A I AVNT+ + D ++GYNTD + A+E+
Sbjct: 77 GVNVTIPHKESVLEYIGEVDETASLIGAVNTL--KFEDETIMGYNTDASGCLRALEEV-- 132
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ + G ++ GAGGA RA AF RGA V I + ERA++LA D+
Sbjct: 133 ------------TSVDGSSVIILGAGGAARACAFQLAVRGASVTILNRTPERARALAEDI 180
Query: 412 MGA-----ARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 465
GA +++ E IL + TP+GM+P+ D P V E + + +V+D VY
Sbjct: 181 KGALDIRVKYGGYELIPACVEGADILIDTTPVGMYPHMDDEPLVKAELMHEGLVVYDLVY 240
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
P +T LL++A AAGA+ VSG+ M L Q F +++G+E P + M + +L
Sbjct: 241 NPPETCLLREARAAGAVPVSGLRMLLYQGAEAFRIWSGREPPLDVMEKALL 291
>gi|260881130|ref|ZP_05893311.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260849607|gb|EEX69614.1| shikimate dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 293
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 141/283 (49%), Gaps = 32/283 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK G++ P+ HS P+L N + +Y+ P+ + LK+ + + F+
Sbjct: 8 IKGTTKNLGVMGWPIAHSLSPVLQNAAIEEAGLDYVYISLPVPPEKLKEAVAGLRAMQFS 67
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G++V P+K+A+M D V A+ I AVNT++ R DG L GYNTDC
Sbjct: 68 GWNVTIPHKQAIMAELDVVDEDARIIGAVNTVVNR--DGHLTGYNTDC------------ 113
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASD 410
G+ A G G+ L GAGGA RA+ +G +++ R+ + + +A+ LA +
Sbjct: 114 -IGFMQPLAQQGFSPKGKAATLLGAGGAARAVIWGLLRAKVRRITLGVRNPAKAERLAEE 172
Query: 411 VMGAARPFEDILNFQPEKGA---------ILANATPLGMHPNTDRVP-VSEETLRDYQLV 460
+ +I E GA +L N TPLGM+P+ + +P V L+ LV
Sbjct: 173 FAS----YGEIQVLHWEDGAFLDHLAVTDLLVNTTPLGMYPHVEGMPPVDWTKLKKDALV 228
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+D +YTP +TR L +A+A G I++G M Q F L+TG
Sbjct: 229 YDIIYTPERTRFLSEAQAHGHAIINGEGMLAGQGAAAFTLWTG 271
>gi|434386886|ref|YP_007097497.1| shikimate 5-dehydrogenase [Chamaesiphon minutus PCC 6605]
gi|428017876|gb|AFY93970.1| shikimate 5-dehydrogenase [Chamaesiphon minutus PCC 6605]
Length = 298
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 145/309 (46%), Gaps = 43/309 (13%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
I TK+ G+I P+ H+ P++HN + + YV V +L + +++
Sbjct: 3 QITGTTKLLGVIGNPIAHTFSPVMHNAAIAALGLDYRYVAFDVTPANLATALAGFAAIGV 62
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G SV P+K+AVM ++ PLA+A+ AVNTI P G NTD I ++
Sbjct: 63 VGCSVTIPHKQAVMPLLKDISPLAKAVGAVNTIWNAPEGWH--GTNTDIPGFIAPLKAMT 120
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKS--- 406
++ G ++ G GGA RA+ G G R + +F D + +
Sbjct: 121 RDWGETTA-------------LILGNGGAARAVVAGCHQLGCRSIRVFGRDAAKLAAFGE 167
Query: 407 ---------LASDVMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVS 450
LASDV P E ++ E G +L N+TP+GMHP+T P+S
Sbjct: 168 SWQDIQLGRLASDV---PVPVELYVHLWDELGTFIDRENLLLVNSTPIGMHPHTMDSPIS 224
Query: 451 EETLRDY---QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
E + + +D +YTPR T+ L+ A+ GAI + G+EM ++Q F L+ + AP
Sbjct: 225 GEMMAKIGANSIAYDLIYTPRPTKFLQLAQGHGAIAIDGLEMLIQQGAIAFELWLQQAAP 284
Query: 508 KEFMREIVL 516
+ MR+ +L
Sbjct: 285 SDIMRQALL 293
>gi|255101876|ref|ZP_05330853.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-63q42]
gi|255307745|ref|ZP_05351916.1| shikimate 5-dehydrogenase [Clostridium difficile ATCC 43255]
gi|423092746|ref|ZP_17080550.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
gi|357553616|gb|EHJ35363.1| shikimate dehydrogenase [Clostridium difficile 70-100-2010]
Length = 287
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK- 405
GY G + G+ + GAGGA A+ GAR + IF D ++RA+
Sbjct: 108 -GVGYVRNLKENGVEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNPKDDFYKRAEQ 166
Query: 406 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
++ DV D+ L + + IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIQSSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KT++++DAEA G + G+ M L Q FNL+TG E P E + E+
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNEL 284
>gi|385839698|ref|YP_005877445.1| shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
gi|300215389|gb|ADJ79802.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius CECT 5713]
Length = 291
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 155/304 (50%), Gaps = 31/304 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
G+ A G + G+ LAGAGGAG +A A G + + IF++D +E+A
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQWEQA 165
Query: 405 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 455
+ + +D ED +F+ E + I +AT +GM P D V + +
Sbjct: 166 EKNVEIINRETDCKATLHHLEDKEDFKKEIASSYIYCDATGVGMKPLEDMTLVEDPSWFH 225
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+VFD VY PR+T+L+K A+ AG +++G+ M L Q F L+TG++ P +++RE+
Sbjct: 226 KDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYIREL 285
Query: 515 VLAK 518
+ ++
Sbjct: 286 LFSE 289
>gi|414076194|ref|YP_006995512.1| shikimate dehydrogenase [Anabaena sp. 90]
gi|413969610|gb|AFW93699.1| shikimate dehydrogenase [Anabaena sp. 90]
Length = 288
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 148/295 (50%), Gaps = 31/295 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G+I PV HS P++HN + + +Y+P V ++L++ + ++S
Sbjct: 2 ITGKTQLLGVIGHPVSHSLSPLMHNAALAKLGLDYVYLPFPVAPENLERAIAGFASIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFS+ P+K+A++ E+ P+AQAI AVNT+ R+ + +G NTD I ++
Sbjct: 62 GFSITIPHKQAILPLLSEISPIAQAIGAVNTVTRQGDN--WVGTNTDVAGFIAPLQ---- 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ + + V+ G GGA RA+ G G A + + + ++ ++
Sbjct: 116 --------TTYHQDWSQKKAVILGNGGAARAVVAGCIQLGLAEIHVVGRNLQKLQAFTQS 167
Query: 411 VMGAARPFED---ILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQL 459
+ PF D + +Q + +L N TP+GM+P+ D P+S + L +
Sbjct: 168 WQNS--PFADKFQVHEWQELPNLLHQANLLVNTTPMGMYPHVDESPLSSQEMGYLPGDAI 225
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
V+D +Y P+ T+ L AE GAI++ G+EM ++Q ++ +E P MR+
Sbjct: 226 VYDLIYIPKPTKFLHLAEKQGAIMIDGLEMLVQQGAAALKIWLQQETVPVNEMRQ 280
>gi|289191666|ref|YP_003457607.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
gi|288938116|gb|ADC68871.1| shikimate 5-dehydrogenase [Methanocaldococcus sp. FS406-22]
Length = 284
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 155/295 (52%), Gaps = 25/295 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+A TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + DGK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEIG 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ KN V+ GAGGA RA+AF ++ V+I + E+A++LA ++
Sbjct: 120 KVKDKN-------------IVIFGAGGAARAVAFEL-AKDNNVIIANRTVEKAEALAKEI 165
Query: 412 MGA-ARPFEDILNFQPEKGAILA-----NATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 464
+ F + + F + NATP+GM+PN D P V E LR+ +V D +
Sbjct: 166 SEKLNKKFGEEVKFSGLDIDLDGIDIIINATPIGMYPNVDVEPIVKAEKLREDMVVMDLI 225
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LLK+A+ A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 226 YNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|384176190|ref|YP_005557575.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595414|gb|AEP91601.1| shikimate dehydrogenase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 280
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 146/293 (49%), Gaps = 32/293 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ I AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVIGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLAS----- 409
P++ F++ GAGGA RA+ F R + I + E+AK L
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTEATPSF 167
Query: 410 ---DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+V+ E + + ++ + T +GM+PN D VP+S + +V D VY
Sbjct: 168 HNKEVLSIKEAEERLGQYD-----VIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYN 222
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 223 PIQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|321312051|ref|YP_004204338.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
gi|320018325|gb|ADV93311.1| shikimate 5-dehydrogenase [Bacillus subtilis BSn5]
Length = 280
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 30/292 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKISIMDYLDHIDESAKLLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFERAKSLASDVMGA 414
P++ F++ GAGGA RA+ F R + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAI-FTTIVRNTPKKFDICNRTLEKAKRLTE----A 163
Query: 415 ARPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 164 TPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 224 IQTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPDIEKMRSIVIGKL 275
>gi|389571866|ref|ZP_10161954.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
gi|388428352|gb|EIL86149.1| shikimate 5-dehydrogenase [Bacillus sp. M 2-6]
Length = 280
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I PVGHS P +HN + +G Y V DDLK S + +G +V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGINVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +MK+ D++ A+ + AVNT+ R +L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVEIMKYLDKIDVTAERLGAVNTV--RLEGDQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI---DFERAKSLASDVMGA 414
PL+ F+L GAGGA RA+ + FDI E+A++L G
Sbjct: 117 -------PLSELSFLLLGAGGAARAIYTTIAEYAPKQ--FDIANRTIEKAEALIESADGK 167
Query: 415 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
LN E+ ++ + T +GM+PN + P+S + +V D VY P +T+
Sbjct: 168 ITSRAIALNTAEERLGEYDVIIHTTSIGMYPNVEETPISLANAKKTAVVCDIVYNPIETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL +A G V GV MF+ QA+ F L+TG M+ IV+ K
Sbjct: 228 LLSEAAGLGLKTVDGVGMFVGQAVRAFELWTGITPDARKMKSIVIEKL 275
>gi|384214801|ref|YP_005605965.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
gi|354953698|dbj|BAL06377.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 6]
Length = 292
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 142/284 (50%), Gaps = 34/284 (11%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRMMLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV+ DE+ P A A+ AVNT++ R DG+LIG+NTD G+
Sbjct: 75 YPYKEAVVPLLDELAPGAAAMGAVNTVVAR--DGRLIGHNTDTT-------------GFA 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLASDVM--- 412
A +P +G + G GG G+A+AF S + + + IFD + RA+ LAS +
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLKVSGLRIFDSETARAEKLASLLARHG 178
Query: 413 GA--ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
GA A+ ED L+ GA L N TP+GM PN +PV L + V DAVY+P
Sbjct: 179 GATVAKSVEDALD-----GATGLVNGTPVGMLPNRG-MPVPATLLHEKMWVADAVYSPLI 232
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
T LL A+A GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAAQAKGARIMTGRELAIYQAADAFELFTGLAPSTEVMGE 276
>gi|433654873|ref|YP_007298581.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293062|gb|AGB18884.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 283
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 156/295 (52%), Gaps = 26/295 (8%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
H+NA T ++G+I P+GHS P+LHN F +N N +Y+ ++ ++LK +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPLLHNAAFESINLNSVYISFDVYEENLKDAILGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE V+K+ D V A+ I AVNTI + ++G L GYNTD +T ++I
Sbjct: 62 KGINVTVPHKENVIKYLDYVSDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESI 115
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 409
KE G + + G+ V+ GAGGA RA+A G G R ++I + ERAK+L+
Sbjct: 116 KEHGME---------VEGKNAVILGAGGAARAIAVGLSLTGVRSIIIANRSKERAKNLSD 166
Query: 410 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
D+ ++D+ + ++ IL NAT +GM PN + PV E + + V+D
Sbjct: 167 YIKNNLDINCTDVTYDDL--NELKEIDILINATSVGMSPNINLSPVDENVVVKAKFVYDI 224
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
+Y P KT L AE ++G +M + QA F ++TG K + I+ K
Sbjct: 225 IYNPEKTLFLSYAEKHKIRNLNGFDMLINQANHSFKIWTGVNFNKNIILNILKKK 279
>gi|33236917|gb|AAP99004.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae TW-183]
Length = 503
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 226/500 (45%), Gaps = 53/500 (10%)
Query: 10 TTMICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPL 65
+ M+CA P ++ +Q+L +++ D++E+RLD IN ++L ++T
Sbjct: 25 SVMLCATVSGPSFCEAKQQILKSLHLV-----DIIELRLDLINELD-DQELHTLITTAQN 78
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTR 125
P+L + K E ++ L+ L ++D ++ + L SH +
Sbjct: 79 PILTFRQHK------EMSTALWIQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIK 131
Query: 126 FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIA 185
I+S + D EDL + + M AT A+I K+V S + +E + P
Sbjct: 132 LILSYHTD----KNEDLDAIYNEMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTV 187
Query: 186 YSVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGL 243
+G GL S++LSP + A+ Y + P + G P +E L +Y ++ + ++GL
Sbjct: 188 LCMGTHGLPSRVLSPLISNAMNYAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGL 246
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
I PV S + HN ++ N Y+ P+ + ++ FFS F+G SV P K
Sbjct: 247 IGDPVDRSISHLSHNFLLSKLSLNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKT 306
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
A+ D + AQ ++NT++ R + K++GYNTD E + +K++
Sbjct: 307 AIFDHVDALDASAQLCESINTLVFR--NQKILGYNTDGE----GVAKLLKQKNIS----- 355
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 421
+ + + GAGGA +A+A +GA + IF+ A +LA+ G A P +
Sbjct: 356 ----VNNKHIAIVGAGGAAKAIAATLAMQGANLHIFNRTLSSAAALATCCKGKAYPLGSL 411
Query: 422 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 481
NF+ I+ N P P R +V D P + L+ A+ G+
Sbjct: 412 ENFK--TIDIIINCLP----------PEVTFPWRFPPIVMDINTKPHPSPYLERAQKHGS 459
Query: 482 IIVSGVEMFLRQAIGQFNLF 501
+I+ G EMF+ QA+ QF L+
Sbjct: 460 LIIHGYEMFIEQALLQFALW 479
>gi|359457721|ref|ZP_09246284.1| shikimate 5-dehydrogenase [Acaryochloris sp. CCMEE 5410]
Length = 292
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 141/305 (46%), Gaps = 34/305 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTF--------RHVNYNGIYVPMFVDDLKKFFST 284
I TK+ G++ PV HS P++HN R + Y I P+ + L S+
Sbjct: 3 QITGATKLLGVMGHPVEHSLSPVMHNAALQALATQQHRFLEYVYIPFPVTANALPAVVSS 62
Query: 285 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 344
GF++ P+K+A+M E +A+A+ AVNT+ P+D G NTD E ++
Sbjct: 63 LRELGCCGFNITIPHKQAIMPLLTETTAIAKAVGAVNTV--WPTDDGWAGTNTDVEGFLS 120
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DID 400
++ R + T + G GGA RA+ G G V
Sbjct: 121 PLQPL--NRDWSTITPC-----------ILGCGGAARAVLAGCAQLGCPQVHMIGRQPAK 167
Query: 401 FERAKSLASDVMG---AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETL 454
E KS + + +ED+ P+ A+L N TP+GM P+ P+S + L
Sbjct: 168 LEHLKSTCATALSIDIQIHLWEDLAPLLPQ-AALLINTTPVGMSPHIQASPLSGAEIDQL 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V+D +YTP T LLK +A+G I ++GVEM ++Q +L+ + AP + MRE
Sbjct: 227 PQEAIVYDLIYTPNPTVLLKQTQASGRIAITGVEMLVQQGAAALSLWIDQPAPVDIMREA 286
Query: 515 VLAKF 519
+LA F
Sbjct: 287 LLACF 291
>gi|145577905|gb|ABP82671.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNSHALSLECAAE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|384160214|ref|YP_005542287.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|384165143|ref|YP_005546522.1| shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|384169284|ref|YP_005550662.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
gi|328554302|gb|AEB24794.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|328912698|gb|AEB64294.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|341828563|gb|AEK89814.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens XH7]
Length = 280
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + N NG Y V+ +LK + + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDKNINGQYFAFQVEPHNLKDAVNGIKALGICGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ DE+ A+ + AVNT+ +R D +LIGYNTD + YK
Sbjct: 63 VPHKVAIMEHLDEIDESAKVLGAVNTV-KREGD-RLIGYNTDGDGF------------YK 108
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+ P++ ++ GAGGA RA+ + + FD+ R A ++ AA
Sbjct: 109 SLVKVLDKPISELSILMIGAGGAARAIFTTIVRKEPKQ--FDV-CNRTPEKAESLIAAAP 165
Query: 417 PFEDILNF-------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F+ Q E+ ++ + T +GM+PNTD VP+S E + +V D VY P +
Sbjct: 166 SFQQKRALTLEEAENQLEQYDVIIHTTSVGMYPNTDAVPLSLERAKTGAIVCDIVYNPIQ 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T LK+AE G + G+ MF+ QA F L+T +E MR IV K
Sbjct: 226 TAFLKEAEKRGLTTLDGIGMFVEQAALAFKLWTEQEPDSGLMRTIVEGKL 275
>gi|1303789|dbj|BAA12445.1| AroD [Bacillus subtilis]
Length = 280
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 150/291 (51%), Gaps = 28/291 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+GHS P +HN + + + +G Y V+ DL+ + G +V
Sbjct: 3 KLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEENDLEDAVKGIRALGVQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M + D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDYLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVKSLMKVLDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
P++ F++ GAGGA RA+ ++ + I + E+AK L A
Sbjct: 117 --------PISELSFLMIGAGGAARAIFTTFVRNTPKKFDICNRTLEKAKRLTE----AT 164
Query: 416 RPF--EDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
F +++L+ + E+ ++ + T +GM+PN D VP+S + +V D VY P
Sbjct: 165 PSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNVDDVPLSLQRAASSAVVCDIVYNPI 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T LLK+A G + GV MF+ QA F L+TG+E E MR IV+ K
Sbjct: 225 QTALLKEASQKGLKTLDGVGMFVEQAALSFQLWTGQEPNIEKMRSIVIGKL 275
>gi|332298817|ref|YP_004440739.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
gi|332181920|gb|AEE17608.1| 3-dehydroquinate dehydratase [Treponema brennaborense DSM 12168]
Length = 501
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 236/516 (45%), Gaps = 48/516 (9%)
Query: 13 ICAPLMAQSVEQVLS--NMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LP 66
IC L ++ + L+ N Y+ + D+ E+R+D + KD + + P LP
Sbjct: 10 ICLCLTGNTLAEDLAILNTYR---KWIDMAELRVDYLE-----KDERLQIRHFPAMAGLP 61
Query: 67 VLIVYRPKWAGGLY-EGDEHKRL---EALHLAE-DLGAD--YVDFELKVASNILGKQYSS 119
++ R K GG + EG+ + + L AE D + Y+DFE ++ Q ++
Sbjct: 62 CILTIRRKIDGGQFLEGEASRTMLFARGLAFAEQDTRKNFAYIDFEEDF--HVPSLQDAA 119
Query: 120 HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIF-QLLSH 178
TR I S + D E P ++ +++M+ TG +I KL + ++++ +F + S
Sbjct: 120 LAFETRIIRSAH-DMENPVY-NICERLAKMRTTGFEIPKLACMPHSLSDVTHMFAEAASL 177
Query: 179 CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLK----GTPVLGLPTVESLRQTYKVEHI 234
I ++G GL S++L+ + + L Y S K G +G +L + Y I
Sbjct: 178 ADSEHILCAMGPLGLPSRILAGRLHSFLTYTSPKEPTGGMQQIGHIDPVTLNEIYNFRAI 237
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+A+TK++G+ P+ + P +HN +R N YVP+ + + + G S
Sbjct: 238 DANTKLYGITGYPLAATDSPRIHNEGYRKHGMNAAYVPVRAATVSEALEFAAETGIQGLS 297
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KE V+++ +V I A NTI+R SD GYNTD A+ D + +
Sbjct: 298 VTIPHKEKVLEYLPQVSAEVGEIDACNTIVRTESD--WFGYNTDAYGLSRAVCDFMNVKN 355
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 414
LA + G+GGA +A AF K + IF+ +AK +A +
Sbjct: 356 -----------LAHCKVAIIGSGGAAKAAAFAVKQLRGKACIFNRTVSKAKQIAENFNFK 404
Query: 415 ARPF-EDILNFQPEKGAILANATPLGMH---PNTDRV-PVSEETLRDYQLVFDAVYTPRK 469
P + + + ++ TP GM P T++ P+ + Y+ V+D VY P
Sbjct: 405 WAPLGPESADLLEKYSDLIIQTTPKGMGAAPPATEQNDPIFFYDFKGYEAVYDVVYVPEI 464
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
T ++ A+AAG + +G M QA QF LFTG E
Sbjct: 465 TPVMARAKAAGCKVSNGHTMLEYQAYKQFELFTGAE 500
>gi|291571861|dbj|BAI94133.1| shikimate 5-dehydrogenase [Arthrospira platensis NIES-39]
Length = 285
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 26/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ PV HS PI+HN H+ + +YVP V D L + + +
Sbjct: 2 IKGTTKLLGIVGYPVEHSMSPIMHNAAIAHLGVDYVYVPFPVAPDQLASAYRGFQAIGIQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ D V LA A+ AVNT+ SD G NTD A A A+
Sbjct: 62 GFNLTIPHKQAIIPLLDNVSKLATAVGAVNTVWY--SDKGWSGTNTDV-AGFLAPLKALN 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ ++ V+ G GGA RA+ G G A + I + ++ +
Sbjct: 119 CPNWHE-----------KIAVILGNGGASRAVVAGCAELGMAEIHIVGRNPQKLEEFKQS 167
Query: 411 VMGAARPFE-DILNFQP-----EKGAILANATPLGMHPNTDRVPVSEET---LRDYQLVF 461
+ + P + ++ N+Q ++ +L N TP+GM P+ DR PV E L+ + +
Sbjct: 168 WLNSPLPIKVNVHNWQELNPLIKQADLLVNTTPVGMSPHIDRSPVDAENFEGLKSGAIAY 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
D +YTPR TR L+ A+ GA+ + G+EM ++Q ++ + P MR+
Sbjct: 228 DLIYTPRPTRFLQLAKNQGAVAIDGLEMLIQQGAAALEIWLQQPIPISVMRQ 279
>gi|15618943|ref|NP_225229.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae CWL029]
gi|15836566|ref|NP_301090.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila pneumoniae J138]
gi|16751990|ref|NP_445356.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae AR39]
gi|161484681|ref|NP_877347.2| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila pneumoniae TW-183]
gi|9087140|sp|Q9Z6M4.1|ARODE_CHLPN RecName: Full=Shikimate biosynthesis protein AroDE; Includes:
RecName: Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; AltName: Full=Type I DHQase;
Includes: RecName: Full=Shikimate dehydrogenase
gi|4377368|gb|AAD19172.1| Shikimate 5-Dehyrogenase [Chlamydophila pneumoniae CWL029]
gi|7189731|gb|AAF38612.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila pneumoniae AR39]
gi|8979408|dbj|BAA99242.1| shikimate 5-dehydrogenase [Chlamydophila pneumoniae J138]
Length = 477
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 225/498 (45%), Gaps = 53/498 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
M+CA P ++ +Q+L +++ D++E+RLD IN ++L ++T P+
Sbjct: 1 MLCATVSGPSFCEAKQQILKSLHLV-----DIIELRLDLINELD-DQELHTLITTAQNPI 54
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L + K E ++ L+ L ++D ++ + L SH + I
Sbjct: 55 LTFRQHK------EMSTALWIQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIKLI 107
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+S + D EDL + + M AT A+I K+V S + +E + P
Sbjct: 108 LSYHTD----KNEDLDAIYNEMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTVLC 163
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+G GL S++LSP + A+ Y + P + G P +E L +Y ++ + ++GLI
Sbjct: 164 MGTHGLPSRVLSPLISNAMNYAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGLIG 222
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
PV S + HN ++ N Y+ P+ + ++ FFS F+G SV P K A+
Sbjct: 223 DPVDRSISHLSHNFLLSKLSLNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAI 282
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
D + AQ ++NT++ R + K++GYNTD E + +K++
Sbjct: 283 FDHVDALDASAQLCESINTLVFR--NQKILGYNTDGE----GVAKLLKQKNIS------- 329
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
+ + + GAGGA +A+A +GA + IF+ A +LA+ G A P + N
Sbjct: 330 --VNNKHIAIVGAGGAAKAIAATLAMQGANLHIFNRTLSSAAALATCCKGKAYPLGSLEN 387
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F+ I+ N P P R +V D P + L+ A+ G++I
Sbjct: 388 FK--TIDIIINCLP----------PEVTFPWRFPPIVMDINTKPHPSPYLERAQKHGSLI 435
Query: 484 VSGVEMFLRQAIGQFNLF 501
+ G EMF+ QA+ QF L+
Sbjct: 436 IHGYEMFIEQALLQFALW 453
>gi|52081116|ref|YP_079907.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644927|ref|ZP_07999160.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|404489997|ref|YP_006714103.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683093|ref|ZP_17657932.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
gi|81690974|sp|Q65H34.1|AROE_BACLD RecName: Full=Shikimate dehydrogenase
gi|52004327|gb|AAU24269.1| shikimate 5-dehydrogenase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348996|gb|AAU41630.1| shikimate dehydrogenase AroD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392736|gb|EFV73530.1| shikimate dehydrogenase [Bacillus sp. BT1B_CT2]
gi|383439867|gb|EID47642.1| shikimate 5-dehydrogenase [Bacillus licheniformis WX-02]
Length = 278
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 26/288 (9%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 297
++GLI PV HS P +HN + ++ G Y V+ DL+ + GF+V
Sbjct: 4 IYGLIGNPVAHSMSPDIHNAALKDLSLEGHYHAFRVENEDLEDAVKGMRALGIQGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K ++MK D + A+A+ AVNT+ RR +G L+GYNTD + +++
Sbjct: 64 PHKVSIMKHLDRIDESAEALGAVNTV-RREKEG-LVGYNTDGAGFLKSLK---------- 111
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
S PL+ +L GAGGA RA+ A R+ + + E+A + G AR
Sbjct: 112 --PSLDRPLSELSILLIGAGGAARAIFTTLAAETPKRLDVANRTPEKALAFTQRFDGEAR 169
Query: 417 PFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
L+ Q + I+ T +GMHPN + P+S ++ LV D +Y P KT
Sbjct: 170 A----LSLQEAEADLSAYDIVIQTTSVGMHPNVEAAPLSLANAKETCLVCDIIYNPLKTA 225
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL +AEA G + GV MF+ QA F L+TG E E M+ IVL +
Sbjct: 226 LLHEAEAKGLKTLDGVGMFIGQAALAFELWTGHEPNMEKMKSIVLQQL 273
>gi|374635880|ref|ZP_09707469.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
gi|373560842|gb|EHP87092.1| shikimate 5-dehydrogenase [Methanotorris formicicus Mc-S-70]
Length = 282
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 155/291 (53%), Gaps = 24/291 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TK+ GL+ PV HS PI+HN FR N N +Y+ V ++L+ +
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLRYVIDGAKAMGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +M++ DE+ A+ I AVNTI + + K IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMEYLDEIDENAKLIGAVNTI--KIENNKAIGYNTDGLGARMALEEEI- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ + ++ GAGGA RA+AF ++ ++I + E+AKSLA +V
Sbjct: 119 ------------GKVVDKSIIIYGAGGAARAVAFEL-AKNNNIIIANRTIEKAKSLAEEV 165
Query: 412 MGAARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 465
E+ + + + I+ NATP+GM+PN D P V E + + +V D +Y
Sbjct: 166 REKLNKTEEEVKYSGLDASLDEIDIIINATPIGMYPNVDVEPIVKAEEMHNDMVVMDLIY 225
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
P +T LLK+A+ GA ++G+ M + Q F ++T ++ E M++ ++
Sbjct: 226 NPLETVLLKEAKKVGAKTINGLGMLIYQGAIAFEIWTNEKPSIEVMKDAII 276
>gi|315222537|ref|ZP_07864426.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
gi|315188223|gb|EFU21949.1| shikimate 5-dehydrogenase [Streptococcus anginosus F0211]
Length = 284
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 144/299 (48%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK D
Sbjct: 3 IDGYTRLVAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYDMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ V+ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMVMLGAGGAATAIIVQAALDGAEEIFVFTRQSSFERVSQKM 165
Query: 409 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
++ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTATKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKKMPTKEIWQALEKKY 283
>gi|449128721|ref|ZP_21764967.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
gi|448941129|gb|EMB22033.1| shikimate 5-dehydrogenase [Treponema denticola SP33]
Length = 493
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 227/516 (43%), Gaps = 46/516 (8%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLI 69
+T +C L +++E+ LS + + K + D+ E+R+D +N + L + +P ++
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEILY-LRNFPERAGIPCIL 59
Query: 70 VYRPKWAGGLYEGDEHKRLEALHLAEDLGAD-------YVDFELKVASNILGKQYSSHQS 122
R K GG + G E R+ + Y+D E S+ G + ++
Sbjct: 60 TVRRKSDGGNFTGGEGARMTIFARGLAFASSDPIKNFAYIDLESDFDSS--GIEEAAMAF 117
Query: 123 GTRFIVSCNLDCETPSEEDLGYL--VSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ 180
+ I S L + P + + + +SR + DI KL F+ N + +I+ +F+ Q
Sbjct: 118 DIKIIRS--LHSKVPVKNIVKTIEGLSRFET---DIPKLAFTANCLNDISELFKASKLIQ 172
Query: 181 VPIIAYSV-GERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYKVEHI 234
SV G GL S++LS + N +VY K L E+L + Y I
Sbjct: 173 NQEYILSVMGPYGLSSRILSKQLNSQIVYTFTPEYIKKNKLEQELIDPETLEELYGFSKI 232
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
+ DT+++G+I K V S P +HN F N N +Y+P+ K+ + + G S
Sbjct: 233 DNDTRLYGVIGKDVNTSLSPQIHNKGFEQKNLNSVYIPISAVSSKEALDFANFLNIKGLS 292
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE-- 352
V P+K ++ + + ++ I AVNT+I + K GYNTD + A+ + + E
Sbjct: 293 VTAPFKSEIIPQINSISEASKFIGAVNTLINE--NKKWFGYNTDVDGFQQALIEFLNEKD 350
Query: 353 -RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
R YK G V++ G + IF+ E+AK++A +
Sbjct: 351 LRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNIA-EK 395
Query: 412 MGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
D +N + ++ T GM P+ D P++ T + VF+ +Y P
Sbjct: 396 YKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIDMDPLNFYTFTGKEKVFELIYRPET 455
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
T++L+ A AG + +G +M QA QF F GKE
Sbjct: 456 TKMLQRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 491
>gi|345302028|ref|YP_004823930.1| shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
gi|345111261|gb|AEN72093.1| Shikimate dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
Length = 297
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 143/296 (48%), Gaps = 33/296 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I A T+ L+ PV HS P++HN FR + +Y+ V D L + + + FA
Sbjct: 9 IRATTRPVALLGDPVAHSFSPLIHNTGFRTQGLDYVYLACRVPKDALPEAIAGLRALGFA 68
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK----LIGYNTDCEASITAIE 347
G +V P+KEAV D P A+AI AVNTI+ R +DG LIG NTD E
Sbjct: 69 GANVTIPHKEAVRPLLDRCTPRAEAIGAVNTIVCR-ADGSGTVALIGDNTDVE------- 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG--AKSRGARVVIFDIDFERAK 405
G+ L G V+ GAGGA RA+ + + R R+ I R +
Sbjct: 121 ------GFLEPLQPLADRLTGAEMVVLGAGGAARAVVYALLTEFRPTRLTIVARTPARGE 174
Query: 406 SLASD--------VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRD 456
+LA+D + A P + + + ++ NATP+GMHP+ P E
Sbjct: 175 ALAADFATYDTHGALQVAAPDQAAPAIRSAR--LIVNATPVGMHPHVAASPWPHAEDFGP 232
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
Q+V+D VY P +TRLL++A GA + G+ M + QA + +TG E P+E ++
Sbjct: 233 EQIVYDLVYNPVRTRLLREAATRGATPIDGLTMLIGQAAAAYRQWTGHELPREAVQ 288
>gi|384449779|ref|YP_005662381.1| shikimate dehydrogenase [Chlamydophila pneumoniae LPCoLN]
gi|269302837|gb|ACZ32937.1| shikimate dehydrogenase family protein [Chlamydophila pneumoniae
LPCoLN]
Length = 477
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 225/498 (45%), Gaps = 53/498 (10%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
M+CA P ++ +Q+L +++ D++E+RLD IN ++L ++T P+
Sbjct: 1 MLCATVSGPSFCEAKQQILKSLHLV-----DIIELRLDLINELD-DQELHTLITTAQNPI 54
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFI 127
L + K E ++ L+ L ++D ++ + L SH + I
Sbjct: 55 LTFRQHK------EMSTALWIQKLYSLAKLEPKWMDIDVSLPKTALQTIRKSH-PKIKLI 107
Query: 128 VSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYS 187
+S + D EDL + + M AT A+I K+V S + +E + P
Sbjct: 108 LSYHTD----KNEDLDAIYNEMLATPAEIYKIVLSPENSSEALNYIKKARLLPKPSTVLC 163
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLIS 245
+G GL S++LSP + A+ Y + P + G P +E L +Y ++ + ++GLI
Sbjct: 164 MGTHGLPSRVLSPLISNAMNYAAGISAPQVAPGQPKLEELL-SYNYSKLSEKSHIYGLIG 222
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
PV S + HN ++ N Y+ P+ + ++ FFS F+G SV P K A+
Sbjct: 223 DPVDRSISHLSHNFLLSKLSLNATYIKFPVTIGEVVTFFSAIRDLPFSGLSVTMPLKTAI 282
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
D + AQ ++NT++ R + K++GYNTD E + +K++
Sbjct: 283 FDHVDALDASAQLCESINTLVFR--NQKILGYNTDGE----GVAKLLKQKNIS------- 329
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
+ + + GAGGA +A+A +GA + IF+ A +LA+ G A P + N
Sbjct: 330 --VNNKHIAIVGAGGAAKAIAATLAMQGATLHIFNRTLSSAAALATCCKGKAYPLGSLEN 387
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
F+ I+ N P P R +V D P + L+ A+ G++I
Sbjct: 388 FK--TIDIIINCLP----------PEVTFPWRFPPIVMDINTKPHPSPYLERAQKHGSLI 435
Query: 484 VSGVEMFLRQAIGQFNLF 501
+ G EMF+ QA+ QF L+
Sbjct: 436 IHGYEMFIEQALLQFALW 453
>gi|296109340|ref|YP_003616289.1| shikimate 5-dehydrogenase [methanocaldococcus infernus ME]
gi|295434154|gb|ADG13325.1| shikimate 5-dehydrogenase [Methanocaldococcus infernus ME]
Length = 277
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 23/289 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++A TK+ GLI PV HS P++HN F+ N N +Y+ V + L+ +
Sbjct: 1 MDAKTKLVGLIGHPVEHSLSPVMHNAAFKDKNLNYVYLAFDVKPERLRFVVDGAKALGMV 60
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K ++K+ D++ A+ I AVNT+ + D IGYNTD + A+E+ I
Sbjct: 61 GFNVTIPHKVEIIKYLDQLSEEAKLIGAVNTV--KIEDDIAIGYNTDGIGARRALEEEI- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ + V+ GAGGA RA+AF ++ VVI + E+AK LA ++
Sbjct: 118 ------------GKVKDKKIVIFGAGGAARAVAFEL-AKDNFVVIANRTLEKAKKLAKEI 164
Query: 412 ---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTP 467
+ + D LN E I+ NATP+GM+PN + P VS+E LR +V D VY P
Sbjct: 165 EEKLNREVGYSD-LNVDLEDVDIVINATPVGMYPNVNEKPIVSKERLRKDMVVMDLVYNP 223
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+T LLK+A+ GA + G+ M + Q F ++TG E E MRE +L
Sbjct: 224 LETTLLKEAKKVGAKTIDGLGMLIYQGAEAFKIWTGVEPNIEVMRESIL 272
>gi|145577935|gb|ABP82686.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar vazensis]
Length = 238
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I+ T +GMHP + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPYVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|225850624|ref|YP_002730858.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
gi|225646318|gb|ACO04504.1| shikimate 5-dehydrogenase [Persephonella marina EX-H1]
Length = 281
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 139/291 (47%), Gaps = 29/291 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN +T+V+G+ PV HSK P+ N F ++ N +Y+P V +DLK +
Sbjct: 5 INGETEVYGIFGYPVKHSKSPLFQNAAFSYLGINAVYLPFSVKPEDLKNAVEGIRALSIK 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+KE V+K +E+ + I A NTI + DG LI YNTD
Sbjct: 65 GVNITVPHKEEVLKLVNEISEEVKYIGASNTI--KNIDGYLIAYNTDA------------ 110
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ G ++G+ ++ GAGGA RA+ +G GA ++ I + +RA+ + D
Sbjct: 111 -YGFIQGLKELVENISGKKVLVIGAGGASRAVVYGLIKEGAEKIYISNRTLKRAEDIIRD 169
Query: 411 VMGAARPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
+R E IL P I+ N T +G+ + DR + +V D
Sbjct: 170 FSKLSRFTEKILEPLPLSQIEELLCNVDIIVNTTSVGLR-DEDRPLFDYSKIEKRHIVVD 228
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+Y RKT LLK AE G + G+ M L Q F ++TGK+AP M++
Sbjct: 229 IIY--RKTPLLKAAEEKGCLWQDGLPMLLYQGARSFEIWTGKKAPINIMKK 277
>gi|339443500|ref|YP_004709505.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
gi|338902901|dbj|BAK48403.1| hypothetical protein CXIVA_24360 [Clostridium sp. SY8519]
Length = 289
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 31/295 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ GLI PV HS P +HN FR + + +Y+ V + L
Sbjct: 4 ITGKTRLTGLIGTPVAHSISPQMHNEAFRTLGLDYVYLAFDVSREHLADAVRGLKEIGIR 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+AV K DE+ P AQ A NT+I DG+LIG+ TD DA++
Sbjct: 64 GFNVTMPHKQAVAKLADELTPAAQIAGACNTVINE--DGRLIGHTTDG----IGFMDAVR 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFE----RAKS 406
+ GY+ + G+ + G GGA A+ A G + + IF+ E A++
Sbjct: 118 DAGYE---------ITGKRMTILGCGGASTAICAQAALDGVSSIAIFEQPAEPFASHARA 168
Query: 407 LASDVM---GAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEET-LRDY 457
AS VM DI + + + I L NAT +GM PNT+ + + + LR
Sbjct: 169 FASRVMEHTACEVTVHDITDPEDLRSCIAASDLLTNATNVGMAPNTEGCLIPDSSFLRPG 228
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+V D +Y P+ T+L + AEAAG + +G+ M L Q F +TG++ P E +R
Sbjct: 229 LIVCDIIYNPQHTKLYQMAEAAGCSVFNGMYMLLFQGAASFQCWTGRQMPVEHIR 283
>gi|212638656|ref|YP_002315176.1| shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
gi|212560136|gb|ACJ33191.1| Shikimate 5-dehydrogenase [Anoxybacillus flavithermus WK1]
Length = 299
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 147/286 (51%), Gaps = 22/286 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
K+F LI PV HS P++HN F+ ++ + Y V+ LK+ + AGF+V
Sbjct: 26 KLFALIGCPVHHSLSPLMHNDAFQSLHIDAHYHAFHVEPHMLKEAVEGLKALQCAGFNVT 85
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K AVM++ DE+ A+ + AVNT++ +GK +GYNTD E + A+ + +
Sbjct: 86 IPHKTAVMEYMDELDETAKQMGAVNTVVNE--NGKWVGYNTDGEGFVRALCEQMN----- 138
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAA 415
L+G ++ GAGGA R + F K A + + + E+A++ A
Sbjct: 139 -------IELSGARILIIGAGGAARGIYFTLLKHEAATIDVCNRTPEKAETFIQKERSAV 191
Query: 416 RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
E + GA I+ N T +GM+P+ D +P+S +TL+ +V D +Y P T+ L
Sbjct: 192 YSLEQA---EERLGAYDIIINTTSVGMYPHVDTMPISLQTLKSGTIVSDIIYNPLMTKFL 248
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++A+ GA + +GV MF+ Q F +TG + M ++V+ +
Sbjct: 249 QEAKEKGARVQNGVGMFVYQGALAFEKWTGIFPNTKRMEQLVIQQL 294
>gi|261405559|ref|YP_003241800.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
gi|261282022|gb|ACX63993.1| shikimate 5-dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 288
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 142/301 (47%), Gaps = 29/301 (9%)
Query: 230 KVEHINA-DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYS 286
KV +N D + G++ P+GHSK P +H+ + +G YVP+ + L
Sbjct: 2 KVNPMNERDYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVK 61
Query: 287 SPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI 346
F G +V P+K VMK+ D V AQ I AVNTI+ +GKL GYNTD + ++
Sbjct: 62 VLGFRGVNVTIPHKVEVMKYLDVVDEGAQRIGAVNTIVN--DNGKLTGYNTDGIGYVRSL 119
Query: 347 EDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAK 405
+D L G+ V+ GAGGA R + + G ++ I + +A
Sbjct: 120 KD------------EACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKAL 167
Query: 406 SLASDVMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQ 458
+LA + A D+ + E+ ++ N T +GM P +P+ E++R+
Sbjct: 168 ALAEEWGSLA----DLRGYGEEQAGEALSDADVIINTTSVGMFPRVSELPIPPESIREGI 223
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
+V D +Y P KT LL+ E I G+ MF+ Q F +TG AP + M+E VL
Sbjct: 224 VVSDLIYNPLKTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQAMKEAVLTS 283
Query: 519 F 519
F
Sbjct: 284 F 284
>gi|428768969|ref|YP_007160759.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
gi|428683248|gb|AFZ52715.1| shikimate dehydrogenase [Cyanobacterium aponinum PCC 10605]
Length = 287
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 150/297 (50%), Gaps = 28/297 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
I TK+ G+I P+ HS P+ N +N + IYVP V+ +L++ F+T+ +
Sbjct: 2 QITGKTKLLGIIGNPIEHSMSPVFQNSAIASLNLDYIYVPFAVEKENLQELFNTFKAVKI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P+KE V+ F D + A+ I AVNT+ + + G NTD + I+ ++
Sbjct: 62 RGFNVTIPHKENVLPFLDYITETAKIIGAVNTVWLT-ENNQWHGTNTDIDGFISPLKSL- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAK---- 405
++ + N T PL + G GGA RA+ G G R + I + ++ K
Sbjct: 120 -DKNWANIT-----PL------VLGNGGASRAVIVGCSELGCREIKIVGRNLDKLKQFKA 167
Query: 406 SLASDVMGAA---RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 459
S A+ + A ++++ + P ++ N TP+GM+P+ + P++ + + + +
Sbjct: 168 SFANTTLKAEISIYTWDELTDLIPH-SQLIVNTTPMGMYPHISQSPLTSSQAQLICEDAI 226
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+D +Y PR T L+ AE GA I+ G EM ++Q F ++T AP MRE +L
Sbjct: 227 AYDLIYNPRPTLFLQQAEKQGAKIIDGSEMLVQQGAVAFEIWTHHPAPVAVMRESLL 283
>gi|146342439|ref|YP_001207487.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. ORS 278]
gi|146195245|emb|CAL79270.1| Putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 278]
Length = 293
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 139/281 (49%), Gaps = 31/281 (11%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGLRCHYQLIEVAGADRAGLSMLLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV++ DE+ P A A+ AVNT++ R DG+LIG+NTD T E A+
Sbjct: 75 YPYKEAVVELLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDT----TGFERAV------ 122
Query: 357 NGTASFGSPLAGR----MFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDV 411
+PL G+ + L GAGG G+A+AF A A + I+DI+ RA+ LA V
Sbjct: 123 -------APLVGQSGRGVVALIGAGGVGKAIAFALANLEVAGLRIYDIERARAEKLAKLV 175
Query: 412 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
G D + + + N TP+GM PN PV++ LRD V DAVY+P T
Sbjct: 176 RAGTTVNVVDSVESALQGAVGVVNGTPIGMLPNRG-TPVADHLLRDDLWVADAVYSPLWT 234
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
LLK A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 235 PLLKAAKARGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|329925883|ref|ZP_08280593.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
gi|328939534|gb|EGG35883.1| shikimate dehydrogenase [Paenibacillus sp. HGF5]
Length = 286
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 28/293 (9%)
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFS 294
D + G++ P+GHSK P +H+ + +G YVP+ + L + F G +
Sbjct: 8 DYLLLGVMGDPIGHSKSPAMHDAAINALGLSGAYVPLHIRPQGLGDAIQAVKALGFRGVN 67
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+K VMK+ D V AQ I AVNTI+ +GKL GYNTD + +++D
Sbjct: 68 VTIPHKVEVMKYLDVVDEGAQRIGAVNTIVN--DNGKLTGYNTDGIGYVRSLKD------ 119
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG 413
L G+ V+ GAGGA R + + G ++ I + +A +LA +
Sbjct: 120 ------EACPDLKGKRIVVIGAGGAARGIIYALIGEGPEKISIVNRTSAKALALAEEWSS 173
Query: 414 AARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
A D+ + E ++ N T +GM P +P+ E++R+ +V D +Y
Sbjct: 174 LA----DLRGYGEEDAGEALSDADVIINTTSVGMFPRISELPIPPESIREGIVVSDLIYN 229
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P KT LL+ E I G+ MF+ Q F +TG AP + M+E VL F
Sbjct: 230 PLKTELLRQGELRRCTIHGGLGMFINQGAYAFEYWTGLTAPVQAMKEAVLTSF 282
>gi|331092180|ref|ZP_08341010.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401952|gb|EGG81526.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 291
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 30/296 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
I+ T + GL+ PV HS P++HN +FR + N IY+ VD L+ + +
Sbjct: 4 QIDGHTILTGLLGSPVSHSISPLMHNESFRQLGLNYIYLAFDVDVNRLETAVEGLRALNV 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P K + + CD++ P A+ AVNT++ DG L GY TD + ++++A
Sbjct: 64 RGFNLTMPNKNEMCRLCDKLSPAAKISGAVNTVVN--DDGVLTGYTTDGIGYMQSLKEA- 120
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD---IDFERAKS 406
G + G+ + GAGGA A+ A G R + +F+ F R +
Sbjct: 121 ------------GHDIIGKKMTMLGAGGASTAILVQAALDGVREISVFNNRSASFHRMEK 168
Query: 407 LASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ 458
+ D+ + E IL + + +L N T +GM P+TD +++ +
Sbjct: 169 VIEDLKNVSDCEMHLYDYSDEHILRREISESVLLTNGTSVGMSPHTDASIITDADMFHKN 228
Query: 459 LVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
L+ D +Y PR+T+LL+ A +G ++G+ M L Q F L+TGKE P E ++E
Sbjct: 229 LIVSDVIYNPRETKLLRMARESGCPTLNGLYMLLFQGAEAFKLWTGKEMPVEKIKE 284
>gi|452992543|emb|CCQ95970.1| Shikimate dehydrogenase [Clostridium ultunense Esp]
Length = 288
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 142/274 (51%), Gaps = 30/274 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
IN + V+ LI P+ S PI++N ++ + N IY+ V DL + + +
Sbjct: 3 INFNKDVYCLIGNPIAKSLSPIINNSYYKIIGKNNIYLAFNVKEKDLADVINVFKILNIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K ++M+ D + A+ + AVNT+ + +G+LIGYNTD + ++E ++
Sbjct: 63 GFNVTLPHKISIMEHLDSISDEAKILGAVNTV--KNKNGRLIGYNTDGMGFLKSLE--LE 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
+ G K+ T ++ GAGGA A++ G + ++I + +AK LA
Sbjct: 119 DVGVKDKTV-----------LVLGAGGAANAISISLAKEGVKKIIISNRTLSKAKILAEK 167
Query: 411 VMGAARPFEDIL---------NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
+ +R F + N + EK I+ N T +GMHPN D P++ + +++
Sbjct: 168 I---SRKFPKVTSEYDSLKLKNVRKEKIDIIVNCTSVGMHPNIDESPINLHGFSENLIIY 224
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAI 495
D +Y PR+T+L++ AE G ++G+ M + QA+
Sbjct: 225 DIIYKPRRTKLMELAEKKGYYTINGLSMLINQAL 258
>gi|421859666|ref|ZP_16291870.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
gi|410830764|dbj|GAC42307.1| shikimate 5-dehydrogenase [Paenibacillus popilliae ATCC 14706]
Length = 297
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 138/288 (47%), Gaps = 19/288 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ T VF +I P+ HS P++HN R + N +Y V + L++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSTSPLMHNAALRELGLNAVYTAFHVASEQLEQAVQGMRALGMC 75
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAVM DEV A I AVNTI+ R G+LIGYNTD + ++++ I
Sbjct: 76 GMNVTIPHKEAVMAHLDEVDESASVIGAVNTIVNR--SGRLIGYNTDGLGFVRSLQEEI- 132
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
F + R+ ++ G A K+ R+ I + ERA+ LA D+
Sbjct: 133 ----------FSNLHQSRILLIGAGGAARGIAYALLKAGCRRLQIANRTLERAEVLARDL 182
Query: 412 MGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
L +P A I+ + T +GMHP+ + VP + LR +V D VY P
Sbjct: 183 SAFGTVAAVQLGTRPTIDAHEVDIVIHTTSVGMHPDGEAVPFDPDWLRPDMIVSDIVYNP 242
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
KT LL++A G SG+ MF+ Q L+TG AP MRE V
Sbjct: 243 LKTALLREAGKRGCRTHSGLGMFVYQGAIALELWTGAAAPVPLMREQV 290
>gi|456353571|dbj|BAM88016.1| shikimate 5-dehydrogenase [Agromonas oligotrophica S58]
Length = 293
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 142/278 (51%), Gaps = 25/278 (8%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAATLGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV++ DE+ P A+A+ AVNT++ R DG+LIG+NTD G++
Sbjct: 75 YPYKEAVVELLDELAPKAKAMGAVNTVVVR--DGRLIGHNTDTT-------------GFE 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 415
A S + L GAGG G+A+AF + G A + I+D + RA+ LAS ++ A
Sbjct: 120 RAVAPLVSETKRGVVALVGAGGVGKAIAFALANLGVAGLRIYDTERARAEKLAS-LLPAG 178
Query: 416 RPFEDILNFQPE-KGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
R + + + + +GA+ + N TP+GM PN PV ++ L V DAVY+P T LL
Sbjct: 179 RAYTVVDSVEAALQGAVGVVNGTPIGMLPNRG-TPVPDQLLHSDLWVADAVYSPLWTPLL 237
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
K A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 238 KAAKAKGARVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|407978440|ref|ZP_11159271.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
gi|407414998|gb|EKF36614.1| shikimate 5-dehydrogenase [Bacillus sp. HYC-10]
Length = 280
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 297
++GLI PVGHS P +HN + +G Y V+ DL S + +GF+V
Sbjct: 4 LYGLIGYPVGHSMSPDIHNAALKDAGIDGHYHGFQVEEHDLADAVSGMKALGISGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +M++ D++ A+ + AVNT+ R G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVEIMQYLDKIDVTAERLRAVNTV--RLEKGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID---FERAKSLASDVMGA 414
PL+ F++ GAGGA RA+ + FDI E+A+SL G
Sbjct: 117 -------PLSELSFLMIGAGGAARAIYMTMAEYAPKS--FDITNRTIEKAESLIESAEGK 167
Query: 415 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
LN E+ ++ + T +GM+PN + P+S + +V D VY P +T+
Sbjct: 168 ITSSAIPLNQAEERLGNYDVIIHTTSIGMYPNVEETPISLTKAKKTAVVCDIVYNPIETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL +A G V GV MF+ QA F L+TG M+ IV+ K
Sbjct: 228 LLSEAAGLGLKTVDGVGMFVGQAARAFELWTGITPDARKMKSIVIEKL 275
>gi|375086215|ref|ZP_09732637.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
gi|374566077|gb|EHR37330.1| shikimate 5-dehydrogenase [Megamonas funiformis YIT 11815]
Length = 286
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 38/290 (13%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 295
TK G+I P+ HS P++ N + ++Y I +P+ +DL+K + +F GF+V
Sbjct: 7 TKNLGVIGYPIKHSLSPVIQNTAIQEAGIDYAYIAMPIAPEDLEKAVIGLKALNFTGFNV 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K +M++ DE+ +A+ I AVNT+ DGKL GYNTD +I I +KE
Sbjct: 67 TIPHKVNIMQYLDEIDEMAKLIGAVNTV--HIKDGKLYGYNTD---AIGFINPLLKEN-- 119
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASDVMGA 414
+ + V+ GAGGA RA+ G +G + +I + + +A+ LA+D
Sbjct: 120 --------VEIKDKTAVILGAGGACRAVVCGLIKQGIKNIILAVRNLAKAQLLAND---- 167
Query: 415 ARPFEDILNFQP------------EKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVF 461
F D+++ + + +L N TPLGM N D + PV E+++ V+
Sbjct: 168 ---FNDLVDIKVCDWHSEEFKQYLAQADLLVNTTPLGMEGNIDSKPPVDWESVKKSAFVY 224
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
D VY P +T+ L++A+ G I++G M Q + +L+T K+ + M
Sbjct: 225 DIVYIPAETKFLQEAKEYGHKILNGERMLAEQGVAALHLWTDKDINVDIM 274
>gi|291548176|emb|CBL21284.1| shikimate dehydrogenase [Ruminococcus sp. SR1/5]
Length = 288
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 33/298 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDF 290
+I T + GL+ PV HS P++HN FR++ + +Y+ V + L + +
Sbjct: 3 NITGHTGLTGLLGSPVAHSVSPLMHNEAFRYLGLDYVYLCFDVTEETLPQAVEGLKACGI 62
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF++ P K +++ DE+ P AQ I AVNT+ R +GKL G+NTD + DA
Sbjct: 63 KGFNLTMPNKNKIVELLDELSPTAQLIGAVNTV--RNDNGKLKGFNTDGYGFTQSARDA- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF----DIDFERAK 405
G + GR + G GGAG A+ + GA+ + +F +ERA
Sbjct: 120 ------------GCDVKGRTITVMGVGGAGMAICGQSALEGAKKIHVFARPTSRYWERAA 167
Query: 406 SLASDVMGAARPFEDILNFQP---------EKGAILANATPLGMHPNTDRVPVSEETLRD 456
++A + M E IL+ E+ +L NAT +GM P+ +S++ L
Sbjct: 168 AMA-EKMSHMTECEMILHEMDDHTALKDALEESNLLINATSVGMVPDVTGTVISDKALFH 226
Query: 457 YQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+L V D VY PR+TRLL++A AG +G+ M L Q + F+++TG + P E +RE
Sbjct: 227 PELTVADVVYEPRETRLLREAREAGCPTFNGMYMLLHQGVKAFHIWTGLDMPVELVRE 284
>gi|194017689|ref|ZP_03056299.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194010589|gb|EDW20161.1| shikimate 5-dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 280
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I PVGHS P +HN + +G Y V DDLK S + +GF+V
Sbjct: 4 LYGVIGNPVGHSMSPDIHNAALKDAGIDGHYHGFQVENDDLKDAISGMKALGISGFNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K +M++ D++ A+ + AVNT+ R G+L+GYNTD E + ++ +A+ +
Sbjct: 64 PHKVDIMQYLDKIDVTAERLRAVNTV--RLEGGQLVGYNTDGEGFLHSLLEALDQ----- 116
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID---FERAKSLASDVMGA 414
PL+ F++ GAGGA A+ + FDI E+A++L G
Sbjct: 117 -------PLSELSFLMIGAGGAANAIYTTIADYAPKS--FDITNRTIEKAEALIESANGN 167
Query: 415 ARPFEDILNFQPEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
L E+ ++ + T +GMHPN + P+S + +V D VY P +T+
Sbjct: 168 FTSSAITLKTAEEQLGEYDVIIHTTSIGMHPNVEETPISLVNAKKTAVVCDIVYNPIETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL++A G V GV MF+ QA F L+TG M+ IV+ K
Sbjct: 228 LLREAAGLGLKTVDGVGMFVGQAARAFELWTGITPDARKMKSIVIQKL 275
>gi|390455054|ref|ZP_10240582.1| shikimate dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 296
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 33/303 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGLRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 406
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLREHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARDDQFFARAEE 170
Query: 407 ---LASDVMGAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 454
+ ++ M A+ P ED + E I AN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHAQVKANIYPLEDQEQLRKEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY+P K++L++ AE+ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVSYIKEQ 290
Query: 515 VLA 517
+ A
Sbjct: 291 LFA 293
>gi|373859117|ref|ZP_09601849.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
gi|372451208|gb|EHP24687.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
Length = 279
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 27/286 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+ HS PI+ N F++ + + Y P V ++L S +GF++
Sbjct: 3 KLFGVIGDPIAHSMSPIMQNDLFQNYSMDAHYFPFHVKKEELVDAIKGLKSLGVSGFNIT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A++ D++ PLA AI AVNT++ DGKL G+NTD GY
Sbjct: 63 VPHKVAIIPLLDQIDPLASAIGAVNTVVN--IDGKLTGFNTDG-------------NGYV 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G + L + ++ GAGGA RAL F G + + DI R K A ++
Sbjct: 108 RGLTEQITNLQDKSVLMIGAGGAARALYFSLAKAGVKRL--DI-CNRTKVKAYTLIEECP 164
Query: 417 PFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
D ++ ++ ++ T +GM P+T+ +P+S E L+ V D +Y P +
Sbjct: 165 YHVDSTAYEMKEAEERLGEYDVIIQTTSIGMSPHTEDIPLSLEHLKAGTFVSDIIYNPLE 224
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
T LL++A+ GAII +G++MF+ Q F ++TG + M+ IV
Sbjct: 225 TALLREAKQKGAIIQNGLDMFVFQGALAFEIWTGIFPDTDRMKNIV 270
>gi|354568130|ref|ZP_08987296.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
gi|353541095|gb|EHC10565.1| Shikimate dehydrogenase [Fischerella sp. JSC-11]
Length = 287
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 32/295 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I P+ HS P++HN + + +Y+P + +DL +++
Sbjct: 2 ITGKTKLLGVIGYPIEHSLSPVMHNAAIAQLGIDYVYLPFPIKPEDLHTAIQGFAAIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+++ V P+AQA+ AVNT+I++ + IG NTD E + ++ +
Sbjct: 62 GFSVTIPHKQAILRSLSAVEPIAQAVGAVNTVIKK--NNSWIGTNTDIEGFLAPLQAHQQ 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
K + V+ G GGA RA+ G G A + + + +R + +
Sbjct: 120 NWSQK-------------IAVILGNGGAARAVVAGCAKLGCAEIHVVGRNVQRLRDFSQS 166
Query: 411 VMGAARPFEDILNFQ-----PE---KGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 459
+ P + LN PE + +L N TP+GM+P D P+S L +
Sbjct: 167 WENS--PLQVNLNVHRWDELPELIPQADLLVNTTPIGMYPKIDESPLSAAEMANLSSQAI 224
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
+D +YTP T+ L+ A+ G + G+EM ++Q ++ +E+ P + MR+
Sbjct: 225 AYDLIYTPNPTKFLQQAQQIGVTAIDGLEMLVQQGAAALKIWLQRESVPVDVMRQ 279
>gi|427705993|ref|YP_007048370.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
gi|427358498|gb|AFY41220.1| shikimate dehydrogenase [Nostoc sp. PCC 7107]
Length = 290
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 31/295 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+ T++ G+I PV HS P++HN + + IY+P + ++L+ + +++
Sbjct: 4 VTGTTELLGVIGHPVEHSLSPVMHNAALAALGVDYIYLPFPIAPENLQIAIAGFATIGVT 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A+M E+ +AQAI AVNT+ R+ + + +G NTD E I ++
Sbjct: 64 GFSVTIPHKQAIMPLLSEITLVAQAIGAVNTVTRK--NQQWVGTNTDIEGFIAPLQ---- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
++ + ++ ++ G GGA RA+ G G A + + + +R D
Sbjct: 118 --------TTYQQDWSQKVAIILGNGGAARAVVAGCYQLGFAEIHVVGRNEQRLIEF-RD 168
Query: 411 VMGAA--------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QL 459
G++ + ++ P+ +L N TP+GM+PN D P++ + D +
Sbjct: 169 SWGSSPIAEKLQVHTWPTLVKLIPQAN-LLVNTTPMGMYPNVDDSPLTAAEMNDLPSGAI 227
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
+D +Y P+ T+ L+ AE GAI++ G+EM ++Q ++ +E P + MR+
Sbjct: 228 AYDLIYIPQPTKFLQQAEKQGAIVIDGLEMLVQQGAAALKIWLQQETVPVDVMRQ 282
>gi|255656694|ref|ZP_05402103.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-23m63]
gi|296451777|ref|ZP_06893503.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296880095|ref|ZP_06904063.1| shikimate dehydrogenase [Clostridium difficile NAP07]
gi|296259387|gb|EFH06256.1| shikimate dehydrogenase [Clostridium difficile NAP08]
gi|296428909|gb|EFH14788.1| shikimate dehydrogenase [Clostridium difficile NAP07]
Length = 287
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 31/300 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F ++ + Y+ + VD +K+ S + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFEKLDLDYRYLAFDITVDKVKEALSAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAKS 406
GY + G+ + GAGGA A+ GAR + IF+ ++RA+
Sbjct: 108 -GVGYVRNLKENEVEVKGKKVTIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 407 LASDVMGAA-------RPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
++ ED L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKEVPKCIVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT++++DAE+ G + G+ M L Q FNL+TG E P + + E+
Sbjct: 227 DLVVTDVVYNPRKTKMIEDAESNGCKAIGGLGMLLYQGAESFNLYTGLEMPVKEVNELCF 286
>gi|386399042|ref|ZP_10083820.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM1253]
gi|385739668|gb|EIG59864.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM1253]
Length = 292
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 140/284 (49%), Gaps = 34/284 (11%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEGLGLRGHYQLIEVAGADTAGLRLMLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
FPYKEAV+ DE+ P A A+ AVNT++ R +G+L G+NTD G+
Sbjct: 75 FPYKEAVVPLLDELAPGAAAMGAVNTVVVR--NGRLTGHNTDTT-------------GFA 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVM--G 413
A +P +G + G GG G+A+AF S + IFD + RA+ LA+ ++ G
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLDVTDIRIFDSEPARAEKLAALLVKQG 178
Query: 414 AAR---PFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
AR ED L+ GA L N TP+GM PN + PVS LR V DAVY+P
Sbjct: 179 GARVAASVEDALD-----GATGLVNGTPVGMLPNRE-TPVSPTLLRQNLWVADAVYSPLI 232
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
T LL A+A GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAAQAKGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|90962767|ref|YP_536682.1| shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|301300360|ref|ZP_07206564.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821961|gb|ABE00599.1| Shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]
gi|300852044|gb|EFK79724.1| shikimate dehydrogenase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 291
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 31/304 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
G+ A G + G+ LAGAGGAG +A A G + + IF++D +E+A
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQWEQA 165
Query: 405 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 455
+ + +D ED +F+ E + I +AT +GM P + V + +
Sbjct: 166 EKNVEIINRETDCKATLHHLEDKEDFKKEIASSYIYCDATGVGMKPLENMTLVEDPSWFH 225
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+VFD VY PR+T+L+K A+ AG +++G+ M L Q F L+TG++ P +++RE+
Sbjct: 226 KDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYIREL 285
Query: 515 VLAK 518
+ ++
Sbjct: 286 LFSE 289
>gi|434403542|ref|YP_007146427.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
gi|428257797|gb|AFZ23747.1| shikimate dehydrogenase [Cylindrospermum stagnale PCC 7417]
Length = 294
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 146/294 (49%), Gaps = 29/294 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN + + +Y+P+ + +L+ + +++
Sbjct: 7 ITGKTKLLGVIGHPVEHSLSPVMHNVALGEMGLDYVYLPLPIAPQNLEIAIAGFAAIGVV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ E+ P+AQAI AVNT+ R+ DGK +G NTD E I ++
Sbjct: 67 GFSVTIPHKQAILPLLSEITPVAQAIGAVNTVTRQ--DGKWVGTNTDVEGFIAPLQTTYH 124
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ + ++ V+ G GGA R++ G G A + + + ++ +
Sbjct: 125 QDWRQ------------KVAVILGNGGAARSVVAGCIQLGFASIHVVGRNVQKLEEFRHS 172
Query: 411 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 460
+ +E++ P+ +L N TP+GM+P + P+S E + D +
Sbjct: 173 WGNSPLKEKFQVHQWEELPQLIPQ-ADLLVNTTPVGMYPQVEASPLSVEEMADLPADAIA 231
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE-APKEFMRE 513
+D +Y P+ T L+ AE GAI + G+EM ++Q ++ + P + MR+
Sbjct: 232 YDLIYIPKPTLFLQQAEKQGAIAIDGLEMLVQQGAAALKIWLQRPIVPVDAMRQ 285
>gi|57234701|ref|YP_181209.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
gi|123618900|sp|Q3Z990.1|AROE_DEHE1 RecName: Full=Shikimate dehydrogenase
gi|57225149|gb|AAW40206.1| shikimate 5-dehydrogenase [Dehalococcoides ethenogenes 195]
Length = 286
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 29/290 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+FGLI PV HS P + N F+H + +Y+ + ++L+ ++ + G +V
Sbjct: 8 LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGLNVTI 67
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K V+K+ D + P A+ I AVNTI+ +G+L GYNTD + +E N
Sbjct: 68 PHKIEVIKYIDSLDPAAEKIGAVNTIVN--ENGRLKGYNTDFGGFVRLLE--------HN 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM----G 413
A A + F L GAGG+ A+A + G + + E+AK LA + G
Sbjct: 118 RIAP-----AKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLAGKMCLRLSG 172
Query: 414 AARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
+ E LN + A ++ N TP+GM + V LR V DA+Y P
Sbjct: 173 KTQGLE--LNDTNLEEALADTDVIVNCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIYNPC 230
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP-KEFMREIVLA 517
KTRLL+DAE GA I++G+EM + Q F ++T ++AP + M+E LA
Sbjct: 231 KTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMKEAELA 280
>gi|336476220|ref|YP_004615361.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
gi|335929601|gb|AEH60142.1| shikimate 5-dehydrogenase [Methanosalsum zhilinae DSM 4017]
Length = 272
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
KVF + PV HS P++HN + +NG+Y V DL+ + F G ++
Sbjct: 2 KVFAVFGDPVKHSLSPMMHNAAMLELGFNGVYHAFQVKSSDLRDAIYGAKAMGFGGVNLT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++F PLA I AVNTI R + GYNTD ++ + D+
Sbjct: 62 VPHKEKALEFI-RPDPLAAKIGAVNTIDFREG---ITGYNTDGIGALRTLLDS------- 110
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G + ++ GAGGA RA++F S GA + I + ERA LA +V R
Sbjct: 111 ------GIDIRNASVLIVGAGGAARAISFQLASEGAHITIANRTQERALKLAEEVNEVGR 164
Query: 417 P----FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
ED+ N E IL N T +GM+P D + + + VFD VY P +T+L
Sbjct: 165 AKGAGLEDLKNLIKE-ADILINTTTVGMYPAVDDTIATADMMHPDLTVFDIVYNPLETKL 223
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
LK+A+ AG+ ++GV M + Q F ++T P M++ VL
Sbjct: 224 LKEAKKAGSNAINGVMMLVYQGAEAFEIWTDIRPPVNIMKQAVL 267
>gi|383762257|ref|YP_005441239.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381382525|dbj|BAL99341.1| shikimate 5-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 464
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 139/293 (47%), Gaps = 29/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSP 288
I+A T + GLI PV HS P +HN F + + YVP+ V+ + +
Sbjct: 9 ISAKTTLVGLIGWPVSHSVSPAMHNAAFAALGMDWRYVPLPVNPALPGAVGDAVRGMRAM 68
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G +V P+K+AV+ F D + P AQA+ AVNT+I +DG L G NTD I +
Sbjct: 69 GMRGINVTVPHKQAVLPFLDHIAPAAQAMRAVNTVIVE-ADGSLTGDNTDAPGFIADLR- 126
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSL 407
S G AG ++ GAGG+ RA+ +G G R+ + + ERA L
Sbjct: 127 ------------SHGVDPAGEHALVLGAGGSARAVVYGLAQAGVQRITVANRRIERAHQL 174
Query: 408 ASDV---MGA----ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQL 459
D+ +GA A D L + ++ N T LGM P+ + P E LR Q
Sbjct: 175 LEDLRPYLGAIPCAAVALPDGL-VEVADAPLIVNCTSLGMTPHVETTPWPRELPLRPGQT 233
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
V+D VY P T LL+ A GA + G+ M + Q F +TG+ AP E MR
Sbjct: 234 VYDLVYNPPDTLLLQQARQQGARAIGGLGMLIWQGALAFERWTGRPAPVEVMR 286
>gi|145577923|gb|ABP82680.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + I + ++AK+L S M E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSSECAAE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|308067676|ref|YP_003869281.1| shikimate dehydrogenase [Paenibacillus polymyxa E681]
gi|305856955|gb|ADM68743.1| Shikimate dehydrogenase [Paenibacillus polymyxa E681]
Length = 296
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 33/303 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N +Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNVYMAFEVGNEQLEEVVRGMRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K ++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTTILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLREHGIGLKGKKMTLVGSGGAATPIAIEAAQAGLAEISIFARNDQFFARAEE 170
Query: 407 LA---------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 454
+ V P E+ + E ILAN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHTQVKANIYPLENQEQLREEIRTSHILANGTGVGMKPLEGKSVIEDVSML 230
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY+P K++L++ AE+ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVAYIKEQ 290
Query: 515 VLA 517
+ A
Sbjct: 291 LFA 293
>gi|218437685|ref|YP_002376014.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
gi|226729102|sp|B7KFV3.1|AROE_CYAP7 RecName: Full=Shikimate dehydrogenase
gi|218170413|gb|ACK69146.1| shikimate 5-dehydrogenase [Cyanothece sp. PCC 7424]
Length = 288
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 29/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+N N IYVP V +DL+ + +
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAVIDHLNLNYIYVPFAVKPEDLRTAIAGLEAIGVV 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+ ++ + AQ + AVNT+ R ++ G NTD
Sbjct: 64 GFNLTIPHKQTIIPLLSTISETAQLVGAVNTVWR--TETGWSGTNTDV------------ 109
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF------DIDFERAK 405
G+ P + V+ G GGA RA+ G G R + +D
Sbjct: 110 -HGFLAPLKRLNLPWSQVSPVILGNGGAARAVVVGCYEMGCRQISVVGRTKEKLDHFYQS 168
Query: 406 SLASDVMGAARPF--EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LV 460
+ + A R + ED+ K +L N TPLGM P+ D+ PV ++ Q +
Sbjct: 169 WQNTPIQEALRVYLWEDLPQLV-SKTQLLINTTPLGMSPHIDQSPVDLTVMKKLQPGAIA 227
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+D +YTP T LK+A+ GAII+ G+EM +Q +++ + P E M +
Sbjct: 228 YDLIYTPNPTLFLKEAQQQGAIIIDGLEMLAQQGALALSIWIKQSVPVEIMSQ 280
>gi|428316838|ref|YP_007114720.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
gi|428240518|gb|AFZ06304.1| shikimate dehydrogenase [Oscillatoria nigro-viridis PCC 7112]
Length = 348
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 156/321 (48%), Gaps = 37/321 (11%)
Query: 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTY 285
+ + + I TK+ G+I PV HS P +HN H+ + +Y+P V DLK + +
Sbjct: 21 SQRTKMIKGTTKLLGVIGHPVEHSLSPAMHNAAISHLGVDFVYLPFPVKPGDLKAALAGF 80
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
++ GFS+ P+K+A++ EV P+A++I AVNT+ +D G NTD E +
Sbjct: 81 AAIGVRGFSITIPHKQAILPLLSEVSPIARSIGAVNTVYM--TDRGWCGTNTDVEGFLAP 138
Query: 346 IE------------DAIK--ERGYKN-------GTASFGSPLAGRMFVLAGAGGAGRALA 384
++ DAI ERG A GS + ++ V+ G GGA RA+
Sbjct: 139 LQTPPTPPYQGGAKDAISALERGNTAVESCPPPSGARGGSDWSQKVAVILGNGGAARAVV 198
Query: 385 FGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFEDI-------LNFQPEKGAILANAT 436
G G A + + + + + + P +++ L+ + +L N T
Sbjct: 199 AGCAQLGCAEIHVVGRNEQNLGEFQQSWVNSPMPVQNLQVHTWDNLSRLISQADLLVNTT 258
Query: 437 PLGMHPNTDRVPVSE---ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQ 493
P+GM+P ++ PV+ + + +V+D +YTP T+ LKDA+ GA + G+EM ++Q
Sbjct: 259 PVGMYPQGEKSPVAAGEIDRIPAGAIVYDLIYTPNPTQFLKDAQLRGARAIDGLEMLVQQ 318
Query: 494 AIGQFNLFTGKEA-PKEFMRE 513
++ KE+ P + MR+
Sbjct: 319 GAAALKIWLNKESVPVDVMRQ 339
>gi|21674623|ref|NP_662688.1| shikimate 5-dehydrogenase [Chlorobium tepidum TLS]
gi|34222587|sp|Q8KBH8.1|AROE_CHLTE RecName: Full=Shikimate dehydrogenase
gi|21647824|gb|AAM73030.1| shikimate 5-dehydrogenase [Chlorobium tepidum TLS]
Length = 295
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 146/304 (48%), Gaps = 48/304 (15%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV------PMFVDDLKKFFSTYSSPDFAG 292
K+FGLI K V +S P++HN F + +Y P + D K AG
Sbjct: 8 KIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRALG---IAG 64
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
FSV PYK+ V+ F DE+ P A +I AVNTI+ +G+L+GYNTD +
Sbjct: 65 FSVTIPYKKTVVPFLDELSPEALSIGAVNTIVN--DNGRLLGYNTDID------------ 110
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAKSLASD 410
G+ + R + G GGA A AF + + V++ D ++A+ + +
Sbjct: 111 -GFAAPLLPMAESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDTQKAEDMLEE 169
Query: 411 VMGAARPFEDILNF-------QP------EKGAILANATPLGMHPNTDRV----PVSEET 453
+ D++ QP +L NATP+G D + P
Sbjct: 170 YA-----YRDLVTIHAGREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGL 224
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
L D Q+V+D VY P +T LL +A AAGA +++G+EM + QA F+++TG+E P + +R+
Sbjct: 225 LHDGQIVYDMVYNPPETPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRK 284
Query: 514 IVLA 517
VLA
Sbjct: 285 TVLA 288
>gi|435850486|ref|YP_007312072.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
gi|433661116|gb|AGB48542.1| shikimate 5-dehydrogenase [Methanomethylovorans hollandica DSM
15978]
Length = 273
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 137/290 (47%), Gaps = 30/290 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+F + P+ HS P++HN F+ + Y V + LK + F G ++
Sbjct: 3 KIFAVFGDPIEHSLSPVMHNAAFKAKGMDCTYHAFRVSREKLKDAIKGAHAMGFGGLNLT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P KE +K E LA + AVNT+ + DG + GYNTD + A+ DA
Sbjct: 63 VPLKEEALKIV-EPDLLAAVMGAVNTVDLK--DG-IRGYNTDGIGAERALVDA------- 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA- 415
G + G ++ GAGGA R ++F S GA V I + ERA LA DV A
Sbjct: 112 ------GVKIEGAKVLIVGAGGAARGISFQLASDGADVTIANRTPERAMRLAEDVAVAGN 165
Query: 416 ------RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
+D++ +L N T LGMHP + + E + +VFD VY P K
Sbjct: 166 VKGCGLEQLDDLI----ASADVLINCTTLGMHPQVETTIATAEQMHAGLVVFDIVYNPLK 221
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T+LL +AE AG+ VSGV M + Q F ++TG E P E M+E V+
Sbjct: 222 TKLLMEAEKAGSKTVSGVMMLVYQGAEAFRIWTGVEPPVEVMKEAVMGAL 271
>gi|333896985|ref|YP_004470859.1| shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112250|gb|AEF17187.1| Shikimate dehydrogenase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 283
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 154/288 (53%), Gaps = 26/288 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
+IN+ T ++G+I P+GHS P++HN F ++++N +YV V+ DLK +
Sbjct: 2 NINSKTSIYGIIGHPIGHSLSPLIHNYAFENLDFNSVYVSFDVNEEDLKDAIIGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE+V+K+ D + A+ I AVNTI + + G L GYNTD +T +++
Sbjct: 62 KGLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--KNNSGSLEGYNTD----VTGFMESL 115
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 409
KE + G+ V+ GAGGA +A+A G GA+ + + + ++AK L+
Sbjct: 116 KEHNV---------DVVGKNAVILGAGGAAKAVAVGLALLGAKSIYVCNRSIDKAKELSI 166
Query: 410 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
++ + D LN E IL NAT +GMHPN D P+ E+ + + V+D
Sbjct: 167 HMENNFNIKSLGISYND-LNMLDEID-ILINATSVGMHPNVDVSPIGEDVVAKAKFVYDI 224
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
+Y P KT L AE ++G++M + QAI F ++TG K+ +
Sbjct: 225 IYNPEKTLFLSYAEKYRIKYINGLDMLINQAIDSFKIWTGANFDKKII 272
>gi|149183163|ref|ZP_01861612.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
gi|148849146|gb|EDL63347.1| shikimate 5-dehydrogenase [Bacillus sp. SG-1]
Length = 277
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 30/287 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+GHS P++HN F+ + Y P V +D++K GF+V
Sbjct: 4 LYGVIGNPIGHSMSPLMHNDAFQEKGIDSHYQPFLVKSEDIEKAVKALKVLGVQGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K A+M DEV PLA+AI AVNT++R+ + IG+NTD I ++E+
Sbjct: 64 PHKRAIMPLLDEVDPLAEAIGAVNTVVRKGD--RFIGFNTDGMGFIRSLEE--------- 112
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAAR 416
S PL + ++ GAGGA RA+ + + G + + I + E+ + + D
Sbjct: 113 ---SCPFPLDNKAVLIIGAGGAARAIFYSMAASGIKNIDICNRTPEKGEDIIKDC----- 164
Query: 417 PF---EDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
PF L+ Q + + I+ T +GMHP T+ +P++ +++ + D +Y P
Sbjct: 165 PFPCTSASLSLQQAEQSMELYDIIVQTTSVGMHPETNAMPLNVTRIKEGAFISDIIYNPL 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+T+++K A G +G+ MF+ Q F L+TG + MR IV
Sbjct: 225 ETKIMKTFCALGGKGDNGIGMFVHQGALAFELWTGIIPDSDRMRNIV 271
>gi|145577913|gb|ABP82675.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
seoulensis]
Length = 237
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 21/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL +
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILNF 424
+L GAGGA RA+ F G + + + + ++AK L A+DV A E
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATEE 166
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++L +A+ GAII
Sbjct: 167 QGNYDIIIQTTTR-GMHPHVEHTPLQTCSLKEGTIVSDIIYNPFETKILCEAKEQGAIIQ 225
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 NGIDMFVYQ 234
>gi|435853263|ref|YP_007314582.1| shikimate 5-dehydrogenase [Halobacteroides halobius DSM 5150]
gi|433669674|gb|AGB40489.1| shikimate 5-dehydrogenase [Halobacteroides halobius DSM 5150]
Length = 286
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 155/288 (53%), Gaps = 26/288 (9%)
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFS 294
+ ++ GL PV HS P +HN F+ + N Y+P V D+LK+ + + G +
Sbjct: 2 NKQLTGLFGYPVEHSLSPAMHNAAFKELGLNSTYLPFAVKPDNLKEAVRGIKALNIKGVN 61
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
+ P+K+ V+ + D++ A+ I AVNTI +GKLIG+NTD I A+++
Sbjct: 62 LTIPHKQKVISYLDQLSNEAKLIGAVNTI--ENQEGKLIGHNTDGRGYIRALQEE----- 114
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDV-- 411
A F +G+ ++ GAGGA RA+AF G + I + E+AK L D+
Sbjct: 115 -----AKFNP--SGKKVLVIGAGGAARAVAFQLSLEGINELYIANRTIEKAKGLVKDIKT 167
Query: 412 ---MGAARPF---EDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQLVFDAV 464
+ +P ++ L +K ++ + TP+GMHP TD PV S + L LV D V
Sbjct: 168 KVSLNQVQPLPLSDNKLADIIKKLDLIIDTTPVGMHPQTDVEPVISAKLLHSNLLVSDLV 227
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
Y P++T LL++A+ GA +SG+ M L Q + F ++TGK+APK+ MR
Sbjct: 228 YNPQETVLLQEAKKVGAETLSGLGMLLYQGVIAFEIWTGKKAPKKVMR 275
>gi|268324616|emb|CBH38204.1| probable shikimate 5-dehydrogenase [uncultured archaeon]
Length = 272
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 143/287 (49%), Gaps = 25/287 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+ HS P++HN F+ + + +Y+ V ++L S +G +V
Sbjct: 3 KIYGIIGDPIAHSLSPVMHNAAFKKLGLDAVYLAFRVTLEELGDAIRGAKSLGISGLNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
P KE + F +A+ I A+NTI PS GYNTD ++ +E+ + E
Sbjct: 63 IPLKEKALSFV-ATEEVAKKIGALNTIDFSSTPS-----GYNTDGIGALMVLEETVGE-- 114
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA 414
+ G+ ++ GAGGA RA++F + GA V + + R+ LAS++ A
Sbjct: 115 -----------IRGKNVLILGAGGAARAISFYLDASGAMVTLANRTEGRSAQLASNLRNA 163
Query: 415 -ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
+ L Q IL NAT +GMHP D ++ + + +VFD VY P +T+LL
Sbjct: 164 NSISLGAELKNQIGDSDILINATSVGMHPKEDATLITADLMHPDLVVFDIVYNPIETKLL 223
Query: 474 KDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
K+A+ AG IV GV+M + Q F L+T ++ P E M V A
Sbjct: 224 KEAKRAGVKKIVDGVKMLVYQGAASFKLWTKEDPPVEVMENAVKAAL 270
>gi|421490826|ref|ZP_15938193.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
gi|400371823|gb|EJP24772.1| shikimate dehydrogenase [Streptococcus anginosus SK1138]
Length = 284
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 146/299 (48%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENTCRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ V+ GAGGA A+ A G + +F FER
Sbjct: 109 -KGFFMSLPSF--VVKGKKMVMLGAGGAATAIIVQAALDGVDEIFVFTRHSSFERVSQKM 165
Query: 409 SDVM--GAAR----PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
++ AA+ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTAAKIWVLPLENKELLQEKINISALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A+ +V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKEMPTKEIWQTLEKKY 283
>gi|167747177|ref|ZP_02419304.1| hypothetical protein ANACAC_01891 [Anaerostipes caccae DSM 14662]
gi|317473620|ref|ZP_07932909.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
gi|167654137|gb|EDR98266.1| shikimate dehydrogenase [Anaerostipes caccae DSM 14662]
gi|316898910|gb|EFV20935.1| shikimate 5-dehydrogenase [Anaerostipes sp. 3_2_56FAA]
Length = 289
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 143/298 (47%), Gaps = 33/298 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GLI PVGHS P +HN F+ + + Y+ + D +K S + +
Sbjct: 4 RIKGTTRLLGLIGSPVGHSGSPAMHNYGFQALGIDAAYLAFDIKEDQVKDAISAVRTLNM 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K K+ DE+ P A+ I AVNT++ R DGKL G+ TD E + ++D
Sbjct: 64 QGLNVTMPCKTEAAKYMDELSPAARLIGAVNTVVNR--DGKLYGHITDGEGFVANLKD-- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKS 406
G + + V+ GAGGA A+ GA V D F RA+
Sbjct: 120 -----------HGVSIGKKDIVIFGAGGAATAILVQCALDGANSVTVINPRDDFFGRAEE 168
Query: 407 LASDVMGAARPFEDI--LNFQPE--------KGAILANATPLGMHPNTDRVPVSEETL-R 455
+ + P DI ++ E K IL N T LGM P D + + +L R
Sbjct: 169 MHKKLR-EETPDCDITLIDLADEAAVKEAVSKTDILINGTLLGMKPKEDTSVIRDTSLFR 227
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+V D VY P++T+LL++A+AAG V G M L Q + F LFTG++ P + ++E
Sbjct: 228 KDMVVADVVYNPKETKLLREAKAAGCRTVQGDGMLLWQGVAAFKLFTGQDMPVKEVKE 285
>gi|328950649|ref|YP_004367984.1| shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
gi|328450973|gb|AEB11874.1| Shikimate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Length = 270
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 141/271 (52%), Gaps = 27/271 (9%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
GLI P+ HS P +H + GIY + D+L+ + G +V P
Sbjct: 3 LGLIGYPLAHSVSPAMHRAALQAAGLEGIYRLLETPPDELESRVMEVRR-GYRGVNVTVP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-IKERGYKN 357
+K AV+ + DEV P QAI AVNTI+ +G+L+G+NTD A+E A + RG +
Sbjct: 62 HKVAVLPYLDEVSPEVQAIGAVNTIVN--EEGRLVGHNTDAPGFTRALEAAGVTARGLRA 119
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA-AR 416
V+ GAGGA RA+ + GARV + + F RAK+LA +V GA A
Sbjct: 120 --------------VVLGAGGAARAVVYALVQAGARVRVANRTFARAKALA-EVFGAEAV 164
Query: 417 PFEDILNFQPEKGA-ILANATPLGMH-PNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
PFE + + A +L NAT +G++ P +P E + + V D VY P +TRLL+
Sbjct: 165 PFEGPEFVRAVREADLLVNATSVGLNDPGASPIP---EGVWPREAVVDIVYNPLETRLLR 221
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+A AAG + V G+ M + Q F L+TG++
Sbjct: 222 EARAAGLVAVDGLGMLVWQGALAFELWTGRQ 252
>gi|284161990|ref|YP_003400613.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
gi|284011987|gb|ADB57940.1| shikimate 5-dehydrogenase [Archaeoglobus profundus DSM 5631]
Length = 271
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 27/282 (9%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
FG+I P+GHS PI+HN FR +N + IY+P V ++LK + F G +V P
Sbjct: 4 FGVIGHPIGHSASPIMHNTVFRTLNIDAIYLPFDVKPENLKDAVYGARALGFKGLNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE + K+ V LA+ I AVNT+ KL GYNTD ++ +E
Sbjct: 64 HKEEITKYVKPVG-LAERIGAVNTV----DVPKLEGYNTDAIGALRTLE----------- 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR-- 416
++ G++ ++ GAGG RA+AF + + ++I + R LA DV
Sbjct: 108 --AYNVDYEGKVVLIVGAGGVARAIAFALAGK-STLIITNRTASRGLKLAEDVRKYGECI 164
Query: 417 --PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
P+E + + K IL N TPLGM +++PV E + + +VFD VY P +T L+K
Sbjct: 165 FYPYERVEELK-GKFDILINCTPLGMKGFEEKLPVPESLIENV-VVFDTVYNPIETPLIK 222
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
A+ G ++ G++M + Q F ++ G + P MR+ V+
Sbjct: 223 LAKKRGCKVIYGLDMLVYQGAEAFKIWFGFDPPILVMRDAVV 264
>gi|428226598|ref|YP_007110695.1| shikimate dehydrogenase [Geitlerinema sp. PCC 7407]
gi|427986499|gb|AFY67643.1| shikimate dehydrogenase [Geitlerinema sp. PCC 7407]
Length = 287
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 33/295 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G++ PV HS PI+HN H+ + +Y+P+ V D+L K + +
Sbjct: 2 ITGSTRLLGVMGHPVEHSLSPIMHNAAIAHLGADFVYIPLPVAPDNLPKAIAGLEALGVR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A+M EV LAQAI AVNT+ P G NTD + +E
Sbjct: 62 GFNLTIPHKQAIMPMLAEVSDLAQAIGAVNTVWWTPQGWS--GTNTDVAGFLAPLE--AL 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDID----FERA 404
R +++ TA V+ G GGA RA+ G G + VV D F+++
Sbjct: 118 GRDWRSTTA-----------VVLGNGGAARAVVAGCGQLGCQTTYVVGRSADKLAQFQQS 166
Query: 405 ---KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE---TLRDYQ 458
LA ++ RP+E + + E I+ N TP+GM P+ D P+ +R
Sbjct: 167 WQGSPLAGNLQ--VRPWEQLADCLAEADLIV-NTTPIGMTPHPDASPLDAALAAQIRPRA 223
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+ +D +YTP T+ L+ AEA GAI + G+EM + Q ++ + P MR+
Sbjct: 224 IAYDLIYTPSPTQFLQQAEAQGAIAIDGLEMLICQGAAGLEIWLEQPVPVAVMRQ 278
>gi|336114442|ref|YP_004569209.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
gi|335367872|gb|AEH53823.1| shikimate 5-dehydrogenase [Bacillus coagulans 2-6]
Length = 280
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 146/287 (50%), Gaps = 30/287 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+ HS P +HN FR + + Y V ++L+ + + AGF+V
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGLDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+A+M + D++ PLA+ I AVNT+IR P +GYNTD + A+++
Sbjct: 64 PHKQAIMPYLDDIDPLAETIGAVNTVIRTPHG--WVGYNTDGPGFMQALKE--------- 112
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL--------A 408
G L+G ++ GAGGA RA+ + GA V + + ++A+ +
Sbjct: 113 ---ESGRVLSGEKVLVIGAGGAARAIYYTLCREGAVTVDLCNRTVKKAEEMRDESPFPCP 169
Query: 409 SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
S V+ E + N+ ++ T +GMHP+TD P+S L+ V D +Y P
Sbjct: 170 SKVLTLKEAEEQLGNY-----TLIVQTTSIGMHPDTDAQPLSLRHLKPGAFVSDIIYNPF 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+T+ LK+A+ GA + +G+ MF+ Q F +TG + M++IV
Sbjct: 225 ETKFLKEAKKRGARVQNGLGMFIYQGAIAFEKWTGVKPDTGKMKKIV 271
>gi|150402110|ref|YP_001329404.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
gi|166219473|sp|A6VFM7.1|AROE_METM7 RecName: Full=Shikimate dehydrogenase
gi|150033140|gb|ABR65253.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C7]
Length = 280
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 149/298 (50%), Gaps = 33/298 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ TK+ GLI PV HS PI+HN + N +Y+ V ++LK S +
Sbjct: 2 MDTKTKLLGLIGHPVDHSFSPIMHNTAIEDLGINYVYLAFDVSEENLKNVVSGAKALQIT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD + +E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKAIGAVNTV--KIENGKAIGYNTDGIGAKRTLEEK-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA--- 408
L + ++ G+GGA RA+ F ++ + I + + E+AK L+
Sbjct: 118 -----------AGILIDKNILIIGSGGASRAVCFEL-AKDNNLTIINRNIEKAKILSEEF 165
Query: 409 SDVMGAARPFE------DILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVF 461
S + +P DI NF I+ N TP+GMHPNT+ PV + ++ +V
Sbjct: 166 SKKLKKQKPINYGDLDLDIKNFD-----IILNTTPVGMHPNTNVDPVIPLKNIKKDAVVM 220
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P + LK+A GA ++G+ M + Q F ++TG + M++ + +K
Sbjct: 221 DLIYNPIEPVFLKEAIKYGAKTINGLGMLVYQGAVSFEIWTGMKPDIYVMKKAINSKI 278
>gi|254412118|ref|ZP_05025893.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
gi|196181084|gb|EDX76073.1| shikimate 5-dehydrogenase [Coleofasciculus chthonoplastes PCC 7420]
Length = 288
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 146/303 (48%), Gaps = 31/303 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
++ I TK+ G+I PV HS PI+HN + + +Y+P+ V +DL + +++
Sbjct: 1 MQQITGTTKLLGVIGHPVEHSLSPIMHNRAIAQLGVDYVYLPLPVKPEDLDVAVAGFAAI 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF++ P+K+A++ EV +AQ + AVNT+ R +D G NTD I +
Sbjct: 61 GLQGFNITIPHKQAIIPLLAEVSDIAQLVGAVNTVWR--TDKGWSGTNTDVLGFIAPLNQ 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV---------IFDI 399
+R + + A V+ G GGA RA+ G G + +
Sbjct: 119 --YQRDWHHTKA-----------VVLGYGGAARAVVVGCMQLGCPEIWVVGRNPYKLSQF 165
Query: 400 DFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-- 457
A + S ++ A P+E++ ++ +L N TP+GM P+ + P+ EE ++
Sbjct: 166 QQSWANTPLSKIL-QAYPWEEMPQLL-QQADLLVNTTPVGMSPHVNESPIDEEIIQRLPK 223
Query: 458 -QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ +D +YTP T+ L+ A+ GA + G+EM ++Q ++ G+ P E MRE +
Sbjct: 224 GAIAYDLIYTPNPTKFLQQAKQQGANPIDGLEMLVQQGAAALQIWLGQTPPVEIMRESLQ 283
Query: 517 AKF 519
K
Sbjct: 284 QKL 286
>gi|227891979|ref|ZP_04009784.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
gi|227866183|gb|EEJ73604.1| shikimate 5-dehydrogenase [Lactobacillus salivarius ATCC 11741]
Length = 291
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 31/304 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L+K +
Sbjct: 1 MERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNDKLEKAVDAIRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ ++ + D++ P A+ AVNT++ +G L GY TD
Sbjct: 61 DMRGSNVSMPNKQKIIPYLDKLDPAAKMAGAVNTVVN--DNGVLTGYTTDG--------- 109
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERA 404
G+ A G + G+ LAGAGGAG +A A G + + IF++D + +A
Sbjct: 110 ----TGFMKSLADEGLDIRGKKMTLAGAGGAGTPIAIQAALDGVKEISIFNLDDAQWAQA 165
Query: 405 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 455
+ + +D ED +F+ E + I +AT +GM P D V + +
Sbjct: 166 EKNVEIINRETDCKATLHYLEDKEDFKKEIASSYIYCDATGVGMKPLEDMTLVEDPSWFH 225
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+VFD VY PR+T+L+K A+ AG +++G+ M L Q F L+TG++ P +++RE+
Sbjct: 226 KDMIVFDTVYAPRETKLMKVAKEAGVDHVLNGLGMMLEQGAEAFKLWTGEDMPVDYIREL 285
Query: 515 VLAK 518
+ ++
Sbjct: 286 LFSE 289
>gi|338176104|ref|YP_004652914.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
gi|336480462|emb|CCB87060.1| shikimate biosynthesis protein AroDE [Parachlamydia acanthamoebae
UV-7]
Length = 674
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 216/471 (45%), Gaps = 35/471 (7%)
Query: 37 ADVVEIRLDCINNFQPGKDLEI--ILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLA 94
AD+VE+RLD N LE+ I + +P++ R + GG + E R+E ++
Sbjct: 25 ADLVELRLDLFVNVDETSLLELKSIFS---IPMIFTLRSQAQGGNFNQSEESRVEHIYRL 81
Query: 95 EDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154
L Y+D E + +++ + SS + I+S + ETP E+ +L + MQ A
Sbjct: 82 AALKPFYLDLESHMPEDVV-RDISSLHPEIQLILSYHNLQETP--ENFDHLYADMQKIPA 138
Query: 155 DIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT 214
K+ + + R+ + +I S+G G +S++L P N + SL
Sbjct: 139 HFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGPNGQISRILGPIVNHPFTFASLDED 198
Query: 215 PV--LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV- 271
P LG + + L + Y+ + + T ++GLI PV S HN + +YV
Sbjct: 199 PKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPVNLSISDETHNAVLAACGMDAVYVK 258
Query: 272 -PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG 330
P+ +L F + G SV P K+++M F D + A+ I AVNT+ + +
Sbjct: 259 IPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSFIDHLDVKAEKIGAVNTL--QFKED 316
Query: 331 KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390
++ G+NTD ++ A+E K G + G+ V+ GAGGA RA+A+ A +
Sbjct: 317 QIYGFNTDGMGAMEALET-------KCG-------IQGKHVVIIGAGGAARAIAYEAVQK 362
Query: 391 GARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS 450
A V + + E+A +A + ++ IL N T + M P++
Sbjct: 363 KALVTVINRSPEKAYEIAHAFGCQGKGLHEMPACAQVGYDILINCTSVPM-------PIA 415
Query: 451 EETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 501
E + + LV D P+ + L++A G ++ G +MF+ QA+GQF L+
Sbjct: 416 FEDILLHVLVMDIKTKPKVSLFLENALKKGCQVIFGYQMFIAQALGQFKLW 466
>gi|374578521|ref|ZP_09651617.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM471]
gi|374426842|gb|EHR06375.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. WSM471]
Length = 292
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD-----DLKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + G Y + V +L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEGLGLRGHYQLIEVAGAGSAELAMMLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
FPYKEAV+ DE+ P A A+ AVNT++ R +G+LIG+NTD G+
Sbjct: 75 FPYKEAVVPLLDELAPGAAAMGAVNTVVVR--NGRLIGHNTDTT-------------GFA 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVM--G 413
A +P +G + G GG G+A+AF S + IFD + RA+ LA+ ++ G
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLDVTDIRIFDSEPARAEKLAALLVKQG 178
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
AR + + L N TP+GM PN + P++ LR V DAVY+P T LL
Sbjct: 179 GARVAASV-EAALDGATGLVNGTPVGMLPNRE-TPIAPTLLRQSLWVADAVYSPLITPLL 236
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
A+A GA I++G E+ + QA F LFTG E M E
Sbjct: 237 AAAQAKGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|300867823|ref|ZP_07112465.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
gi|300334154|emb|CBN57639.1| Shikimate dehydrogenase [Oscillatoria sp. PCC 6506]
Length = 292
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 27/295 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK+ G+I P+ HS P++HN H+ + +Y+ P+ +DL S +++
Sbjct: 2 IKGTTKLLGVIGHPIEHSLSPVMHNAALSHLGLDIVYLAFPVKPEDLNVAISGFAAVGLL 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFS+ P+K+ ++ EV P+A A+ AVNT+ R + G NTD + +
Sbjct: 62 GFSITIPHKQGILPLLSEVSPVAIAVGAVNTVYRTANGWG--GTNTDVRGFLAPLRSLSL 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD------IDFERA 404
+ G K + ++ V+ G+GGA RA+ G G A + + +F+++
Sbjct: 120 KTGTKQDWSQ-------KVAVILGSGGAARAVVAGCAELGCAEIHVVGRSEQKLTEFQQS 172
Query: 405 ---KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQ 458
LA +++ +E+ L K +L NATP+GM+P D PV+ E L +
Sbjct: 173 WVNSPLAVNLL--THTWEE-LPMLISKADLLVNATPIGMYPRGDESPVALSAIERLSEGA 229
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+ +D +YTP T LK A+ GAI + G+EM ++Q ++ + P + MR+
Sbjct: 230 IAYDLIYTPNPTLFLKQAQERGAIAIDGLEMLVQQGAAALEIWLQQPIPVDVMRQ 284
>gi|145577947|gb|ABP82692.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
ostriniae]
Length = 238
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L GAGGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVHSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQMCSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|422342123|ref|ZP_16423063.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
gi|325474191|gb|EGC77379.1| hypothetical protein HMPREF9353_01729 [Treponema denticola F0402]
Length = 771
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 233/523 (44%), Gaps = 60/523 (11%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-----P 64
+T +C L +++E+ LS + + K + D+ E+R+D +N EI+ +
Sbjct: 280 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLN------QSEILYLRNFPERAG 332
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLE------ALHLAEDL-GADYVDFELKVASNILGKQY 117
+P ++ R K GG + G E R+ A A+ + Y+D E S+ G +
Sbjct: 333 IPCILTVRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSS--GIEE 390
Query: 118 SSHQSGTRFIVSCNLDCETPSEEDLGYL--VSRMQATGADIIKLVFS---VNDITEIARI 172
++ + I S L + P + + + +SR + DI KL F+ +ND++E+ +
Sbjct: 391 AARAFDIKIIRS--LHSKVPVKNIVKTIEGLSRFET---DIPKLAFTANCLNDVSELFKA 445
Query: 173 FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQ 227
+L+ + + I +G GL S++LS K N +VY K L E+L +
Sbjct: 446 SKLIKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEE 503
Query: 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS 287
Y I+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ +
Sbjct: 504 LYGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANL 563
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
G SV P+K ++ + + ++ I AVNT+I + K GYNTD + A+
Sbjct: 564 LKIKGLSVTAPFKSEIIPLINSISEASKFIGAVNTLI--TENKKWFGYNTDVDGFQQALM 621
Query: 348 DAIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERA 404
+ + E R YK G V++ G + IF+ E+A
Sbjct: 622 EFLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKA 667
Query: 405 KSLASDVMGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
K++A + D +N + ++ T GM P+ P++ T + VF+
Sbjct: 668 KNIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIYMDPLNFYTFTGKEKVFE 726
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+Y P T++LK A AG + +G +M QA QF F GKE
Sbjct: 727 LIYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 769
>gi|145577951|gb|ABP82694.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
tolworthi]
Length = 238
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|322517131|ref|ZP_08070015.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
gi|322124281|gb|EFX95792.1| shikimate dehydrogenase [Streptococcus vestibularis ATCC 49124]
Length = 285
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 31/290 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQINGVYVAWEIPESDLAETVKNIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG+LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGRLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 407
SP R+ +L GAGGA +A+ A GA+ V + F++AK
Sbjct: 119 -------------SPKDARLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSFDKAKKS 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 459
++ D+ F+ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQTTCHLEFHALNDLKYFKEELGQADLLVNATSVGMDGASSPIPTDTKFPKGL-L 223
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|257887461|ref|ZP_05667114.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|293377413|ref|ZP_06623615.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|293570466|ref|ZP_06681521.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|424763558|ref|ZP_18191028.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430841215|ref|ZP_19459134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|431035007|ref|ZP_19491884.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|431737780|ref|ZP_19526732.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|431751761|ref|ZP_19540448.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|431756603|ref|ZP_19545235.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|431761855|ref|ZP_19550417.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
gi|257823515|gb|EEV50447.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,141,733]
gi|291609412|gb|EFF38679.1| shikimate 5-dehydrogenase [Enterococcus faecium E980]
gi|292643931|gb|EFF62039.1| shikimate dehydrogenase [Enterococcus faecium PC4.1]
gi|402422669|gb|EJV54899.1| shikimate dehydrogenase [Enterococcus faecium TX1337RF]
gi|430493991|gb|ELA70241.1| shikimate 5-dehydrogenase [Enterococcus faecium E1007]
gi|430563722|gb|ELB02931.1| shikimate 5-dehydrogenase [Enterococcus faecium E1590]
gi|430598386|gb|ELB36127.1| shikimate 5-dehydrogenase [Enterococcus faecium E1972]
gi|430615055|gb|ELB52025.1| shikimate 5-dehydrogenase [Enterococcus faecium E2620]
gi|430620457|gb|ELB57259.1| shikimate 5-dehydrogenase [Enterococcus faecium E3083]
gi|430624547|gb|ELB61197.1| shikimate 5-dehydrogenase [Enterococcus faecium E3548]
Length = 284
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 146/289 (50%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + + L GAGGA +A+ A GA+ +V++ + F + K
Sbjct: 118 -----------GISVKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM D+ P+ + + +L
Sbjct: 167 FEQLSYRTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHEKL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|145577959|gb|ABP82698.1| shikimate 5-dehydrogenase [Bacillus weihenstephanensis]
Length = 238
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
EV PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 EVAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + I + ++A++L + M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAENLIAGCMANVNSHALSLECAAE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I+ T +GMHP+ P+ +L+ +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVAYTPLEIRSLKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|253574706|ref|ZP_04852046.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845752|gb|EES73760.1| shikimate 5-dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 301
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+ G+I P+ HSK P++H + G Y+P V + L++ + F G +V
Sbjct: 28 LLGVIGDPIQHSKSPVMHTAALQACGLTGAYLPFHVKGNRLEEAIRGIRALGFRGINVTV 87
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYK 356
P+K VM + D + A+ I AVNTI+ DG L GYNTD I ++ E+A E
Sbjct: 88 PHKVEVMNYLDHIDESARLIGAVNTIVN--DDGVLTGYNTDGIGYIRSLKEEAAPE---- 141
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAA 415
L G+ ++ G GGA R + + + RV I + E+A+ LA++ G
Sbjct: 142 ---------LKGKRVLVLGCGGAARGIVYALLQEEPGRVTIANRTGEKAQELAAEWSGLG 192
Query: 416 R----PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+++ PE I+ N T +GMHP+ P+ + + +V D +Y P KT
Sbjct: 193 SLTGCGMDELAEVLPEVDLII-NTTSVGMHPHVSDCPLDARLIPEGIVVSDLIYNPLKTE 251
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
LL AEA G I SG+ MF+ Q F +TG AP MR VL
Sbjct: 252 LLVQAEAKGCTIHSGLGMFIYQGAYAFERWTGLIAPVGAMRAAVL 296
>gi|145577941|gb|ABP82689.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
azorensis]
gi|145577953|gb|ABP82695.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
zhaodongensis]
Length = 238
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577907|gb|ABP82672.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
entomocidus]
Length = 238
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577919|gb|ABP82678.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
wratislaviensis]
gi|145577933|gb|ABP82685.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
shandongiensis]
Length = 237
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 21/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD-LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M + DE
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEGLGEAVRGLKALGISGFNVTTPHKVAIMDYLDE 60
Query: 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL +
Sbjct: 61 IDPLARQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQEK 106
Query: 370 MFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILNF 424
+L GAGGA RA+ F G + + + + ++AK L A+DV A E
Sbjct: 107 RILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACAADVHSVALSLEKATEE 166
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
Q I+ T GMHP+ + P+ +L++ +V D +Y P +T++L +A+ GAII
Sbjct: 167 QGNYDIIIQTTTR-GMHPHVEHTPLQICSLKEGTIVSDIIYNPFETKILCEAKEQGAIIQ 225
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 NGIDMFVYQ 234
>gi|449102531|ref|ZP_21739279.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
gi|448966120|gb|EMB46778.1| shikimate 5-dehydrogenase [Treponema denticola AL-2]
Length = 493
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 230/522 (44%), Gaps = 58/522 (11%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----L 65
+T +C L +++E+ LS + + K + D+ E+R+D +N + + L P +
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEI-----LYLRNFPERAGI 55
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD-------YVDFELKVASNILGKQYS 118
P ++ R K GG + G E R+ + Y+D E S+ G + +
Sbjct: 56 PCILTVRRKSDGGNFTGGEGARMTIFARGLAFASSDPIKNFSYIDLESDFDSS--GIEEA 113
Query: 119 SHQSGTRFIVSCNLDCETPSEEDLGYL--VSRMQATGADIIKLVFS---VNDITEIARIF 173
+ + I S L + P + + + +SR + DI KL F+ +ND++E+ +
Sbjct: 114 ARAFDIKIIRS--LHSKVPVKNIVKAIEGLSRFET---DIPKLAFTANCLNDVSELFKAS 168
Query: 174 QLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQT 228
+L+ + + I +G GL S++LS K N +VY K L E+L +
Sbjct: 169 KLIKNQEY--ILSVMGPYGLSSRILSKKLNSQIVYTFTPEYIKKNKLEQALIDPETLEEL 226
Query: 229 YKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP 288
Y I+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ +
Sbjct: 227 YGFSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLL 286
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G SV P+K ++ + + ++ I A+NT++ + K GYNTD + A+ +
Sbjct: 287 KIKGLSVTAPFKSEIIPLINSISEASKFIGAINTLV--SENKKWFGYNTDVDGFQQALME 344
Query: 349 AIKE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK 405
+ E R YK G V++ G + IF+ E+AK
Sbjct: 345 FLNEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAK 390
Query: 406 SLASDVMGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
++A + D +N + ++ T GM P+ P++ T + VF+
Sbjct: 391 NIA-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIYMDPLNFYTFTGKEKVFEL 449
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+Y P T++LK A AG + +G +M QA QF F GKE
Sbjct: 450 IYRPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 491
>gi|333914007|ref|YP_004487739.1| shikimate dehydrogenase [Delftia sp. Cs1-4]
gi|333744207|gb|AEF89384.1| Shikimate dehydrogenase [Delftia sp. Cs1-4]
Length = 279
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 26/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-- 291
I T + ++ P+ + P +HN +R + + +V + + K++ S + DFA
Sbjct: 5 IAGHTSICVVVGDPIEFTLSPKMHNAAYRTLGIDDKFVFVCCEVNKEYTSKIA--DFARV 62
Query: 292 ----GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
G +V P+ ++++ DEV P+A+ I +VNT++ R + +LIGYNTD ++TA+E
Sbjct: 63 MGVCGLAVANPHNTKIVQYLDEVDPVAELIGSVNTVVNRKN--RLIGYNTDWVGAVTALE 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 407
+ L + + GAGGA RA+AFG + RG+ + IF D ++A +L
Sbjct: 121 --------------LITTLDKKKVAILGAGGAARAIAFGLRERGSDISIFARDIKKASAL 166
Query: 408 ASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
A V + FE+I I+ NATP+G P + VS L Q+V DAVY P
Sbjct: 167 ARRVGAVSLTFEEIAGVADYD--IIVNATPIGKSPFQNISLVSASCLNSDQVVMDAVYLP 224
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
KTRLL +AE GA IV G+EM L Q QF + T +AP + MR +L F
Sbjct: 225 LKTRLLVEAEKIGAKIVPGMEMLLHQGAAQFEIHTDCKAPLDAMRSSLLNIF 276
>gi|336366066|gb|EGN94414.1| hypothetical protein SERLA73DRAFT_114628 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378738|gb|EGO19895.1| hypothetical protein SERLADRAFT_363753 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1617
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 232/527 (44%), Gaps = 62/527 (11%)
Query: 36 GADVVEIRLDCINN------FQP--------GKDLEIILTKKPLPVLIVYRPKWAGGLY- 80
G D +E+R+D + + F P + L + LP++ R GG +
Sbjct: 1106 GVDALEVRVDLLRSPKDFDAFGPYIPPVAYVTEQLAALRRTTSLPIVFTVRTVSQGGSFP 1165
Query: 81 EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE 140
+ E + L+LA +GA+Y+D E+ ++ K SH+ ++ I S + D
Sbjct: 1166 DKAEKEAFHLLNLAVRIGAEYIDAEISWPEKLI-KDLVSHKGSSQIIASWH-DWTGKMRW 1223
Query: 141 DLGYLVSR--MQATGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVGERGL 193
+ + ++ + A DI+K+V N + + ++ +S PIIA ++G G
Sbjct: 1224 NEASVKAKYDIAARFGDIVKIVGKANSVQDNFALYDFVSRVSSASNAKPIIAINMGVEGQ 1283
Query: 194 VSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHS 251
+S++L+ F+ S P P S Q + H+ + + + P+ HS
Sbjct: 1284 MSRILNSTFSPV----SHPLLPTKAAPGQLSYAQIQQALHLLGQLPAQRYFIFGNPIAHS 1339
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKK-FFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
P LHN F + Y + D+ + + +SPDF G SV P+K V+ D++
Sbjct: 1340 MSPTLHNTGFEVLGLPHTYQLLETTDVGEGIKAALASPDFGGASVTIPFKLDVIPLLDQL 1399
Query: 311 HPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSP 365
P A+AI AVNTI+ R +D L G NTD I ++++ R + G+P
Sbjct: 1400 SPAAEAIGAVNTIVPRLADASGTNRILYGDNTDW----LGIVESVRSRA-----PALGAP 1450
Query: 366 LAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARPFEDILNF 424
A ++ GAGG RA F K+ GA+ + +++ +A+ L A + L
Sbjct: 1451 QAA---LVIGAGGTARAAIFALKALGAQHIYLYNRTAGKAQILVDAFPDAHVELVERLGI 1507
Query: 425 QPEKG--------AILANATPLGMHPNTDRV--PVSEETLRDYQLVFDAVYTPRKTRLLK 474
P +G + A+AT + D V PVS + +V D Y P +T LL
Sbjct: 1508 WPGEGLVPSVVVSTVPASATTT-EEGSADAVFLPVSIFDAKLEGVVVDMAYKPAETPLLA 1566
Query: 475 DAE--AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
A+ A V GVE+ L Q QF +TG+ PK + E VL K+
Sbjct: 1567 LAKRVAPNWATVRGVEVLLEQGYVQFETWTGRRCPKHVVAERVLEKY 1613
>gi|374322326|ref|YP_005075455.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
gi|357201335|gb|AET59232.1| shikimate dehydrogenase [Paenibacillus terrae HPL-003]
Length = 296
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 146/303 (48%), Gaps = 33/303 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNV 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAIVQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLREHGIDLTGKKMTLVGSGGAATPIAIEAARAGLAEISIFARNDQFFARAEE 170
Query: 407 LA---------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSE-ETL 454
+ V P ED + E I AN T +GM P + + + L
Sbjct: 171 NVRIINEDMKHTQVKANIYPLEDQEQLREEIRTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY+P K++L++ A++ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAQSVGATAINGLGMMLWQGALAFELWTGQEMPVSYIKEQ 290
Query: 515 VLA 517
+ A
Sbjct: 291 LFA 293
>gi|145577915|gb|ABP82676.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar sotto]
gi|145577925|gb|ABP82681.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar alesti]
gi|145577955|gb|ABP82696.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
fukuokaensis]
Length = 238
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNNAFEHLNMDAHYHAFLVEEEVLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L GAGGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|78189310|ref|YP_379648.1| quinate/shikimate 5-dehydrogenase [Chlorobium chlorochromatii CaD3]
gi|123579620|sp|Q3AQX0.1|AROE_CHLCH RecName: Full=Shikimate dehydrogenase
gi|78171509|gb|ABB28605.1| shikimate dehydrogenase [Chlorobium chlorochromatii CaD3]
Length = 287
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 144/304 (47%), Gaps = 38/304 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFR------HVNYNGIYVPMFVDDLKKFFSTYSS 287
+N+ T++F L+ + V +S P++HN F+ H I V D + +
Sbjct: 1 MNSSTRIFALLGRAVDYSYSPLIHNTAFQALGLPYHYTIFNIAEAALVGDALR---GARA 57
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
GFSV PYK+ V+ F DE+ A I AVN I+ + +GKLIGYNTD
Sbjct: 58 LGLGGFSVTIPYKQTVVPFLDELSEEATTIQAVNCIVNK--NGKLIGYNTDI-------- 107
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAK 405
G+ + ++ L G L G+GGA A AF +V++F D ++AK
Sbjct: 108 -----LGFASPLFAYREALHGATIALFGSGGAALAAIEAFQRYFTPKQVLLFARDSQKAK 162
Query: 406 SLASDVMGAAR-------PFEDILNFQPEKGAILANATPLGMHPNTDR---VPVSEETLR 455
S + R P D + + ++ NATPLG D +P+ L
Sbjct: 163 SQLRSSLALERYTNLAIVPLSDYERVRECR--LVINATPLGTKGRADGSAIIPLESNLLH 220
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V+D VY P T LL+ A+A GA + G+EM + QA F L+TG++ P E +R+ V
Sbjct: 221 SEHIVYDMVYNPTITPLLQAAQAVGASTIFGIEMLIGQAEQAFTLWTGEKMPTELVRQTV 280
Query: 516 LAKF 519
+AK
Sbjct: 281 MAKL 284
>gi|387929812|ref|ZP_10132489.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
gi|387586630|gb|EIJ78954.1| shikimate 5-dehydrogenase [Bacillus methanolicus PB1]
Length = 277
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 31/289 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K++G+I P+ HS P++HN F+ + Y P V DL+ + + +GF+V
Sbjct: 3 KLYGVIGDPISHSMSPVMHNDLFKVYGIDAHYHPFHVKRGDLEAAVQGLKAINCSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M F D++ PLA+AI AVNT++ + G+LIG+NTD RG+
Sbjct: 63 VPHKTEIMNFLDDIDPLAEAIGAVNTVVNK--GGRLIGFNTDG-------------RGFL 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 415
G + L ++ GAGGA +A+ + G + IDF R A+ ++ A
Sbjct: 108 EGLKRNFAVLDSTRVLIIGAGGAAKAIYYTMAHAGVK----HIDFCNRTAEKAAQLIEAC 163
Query: 416 RPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
PF N P + A ++ T +GM PN + P+S E L V D +Y P
Sbjct: 164 -PFSVQSNIYPREKAENRLSNYNLIIQTTSVGMSPNINASPLSLENLGIGAFVSDIIYNP 222
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+T +L+DA+ GA +G++MF+ Q F +TG E M++IVL
Sbjct: 223 LETVILRDAKRRGAGTQNGLDMFVFQGAFAFEKWTGIFPDIERMKQIVL 271
>gi|423070585|ref|ZP_17059361.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
gi|355365671|gb|EHG13393.1| shikimate dehydrogenase [Streptococcus intermedius F0413]
Length = 284
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 140/289 (48%), Gaps = 35/289 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+Y+ + DDLK D
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYLAWEISKDDLKATVENIRRYDMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ ++ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGADEIFVFTRKTSFERVSQQM 165
Query: 409 SDVMGAARPFEDILNFQPEK--------GAILANATPLGMHPNTDRVPVSEETLRDYQ-- 458
+ AA +L + + A+L N T LGM T VP +T+R +
Sbjct: 166 KQIQQAASTKISVLLLEQRELLQEKLNVSALLVNGTSLGMDEKTSPVP---DTIRLSKNL 222
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
LV D +Y P +T LK A+ V+G+ M L QA F L+TGK+ P
Sbjct: 223 LVADVIYQPFETPFLKWAKKQNVQAVNGLGMLLYQAAEAFKLWTGKDMP 271
>gi|310640411|ref|YP_003945169.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|386039559|ref|YP_005958513.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
gi|309245361|gb|ADO54928.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|343095597|emb|CCC83806.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 296
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 150/303 (49%), Gaps = 33/303 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ GL++ P+GHS P +HN F + N Y+ V + L++ + +
Sbjct: 6 RIDGRTQLIGLLATPIGHSLSPAMHNLAFEKLGLNNAYMAFEVGNEQLEEVVRGMRALNI 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G++V P K A++++ DE+ A+ AVNT++ +DGKL GY+TD
Sbjct: 66 RGYNVSMPNKTAILQYLDELDDSAKFTGAVNTVVN--TDGKLKGYSTDGS---------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G L G+ L G+GGA +A A G A + IF D F RA+
Sbjct: 114 ---GYVRNLQEHGIDLKGKKMTLVGSGGAATPIAIEAARAGLAEISIFARNDQFFARAEE 170
Query: 407 ---LASDVMGAARPFEDILNFQPEK--------GAILANATPLGMHPNTDRVPVSE-ETL 454
+ ++ M A+ +I + ++ I AN T +GM P + + + L
Sbjct: 171 NVRIINEEMKHAQVKANIYALEDQEKLREEILTSHIFANGTGVGMKPLEGKSVIEDVSML 230
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY+P K++L++ AE+ GA ++G+ M L Q F L+TG+E P +++E
Sbjct: 231 RSDLIVTDVVYSPAKSKLMEQAESVGATAINGLGMMLWQGALAFELWTGQEMPVAYIKEQ 290
Query: 515 VLA 517
+ A
Sbjct: 291 LFA 293
>gi|145577911|gb|ABP82674.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar kenyae]
Length = 238
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|42527148|ref|NP_972246.1| 3-dehydroquinate dehydratase [Treponema denticola ATCC 35405]
gi|449111792|ref|ZP_21748361.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|449113401|ref|ZP_21749906.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
gi|41817572|gb|AAS12157.1| 3-dehydroquinate dehydratase, type 1, putative/shikimate
5-dehydrogenase, putative [Treponema denticola ATCC
35405]
gi|448957063|gb|EMB37816.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 33521]
gi|448959611|gb|EMB40330.1| shikimate 5-dehydrogenase [Treponema denticola ATCC 35404]
Length = 493
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 231/520 (44%), Gaps = 54/520 (10%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----L 65
+T +C L +++E+ LS + + K + D+ E+R+D +N + + L P +
Sbjct: 2 STKVCLVLTEKTIEKNLSALEKYK-KFIDIAELRVDYLNQSEI-----LYLRNFPERAGI 55
Query: 66 PVLIVYRPKWAGGLYEGDEHKRLE------ALHLAEDL-GADYVDFELKVASNILGKQYS 118
P ++ R K GG + G E R+ A A+ + Y+D E S+ G + +
Sbjct: 56 PCILTVRRKSDGGNFTGGEGARMTIFARGLAFANADPIKNFSYIDLESDFDSS--GIEEA 113
Query: 119 SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS---VNDITEIARIFQL 175
+ + I S L + P + ++ V + DI KL F+ +ND++E+ + +L
Sbjct: 114 ARAFDIKIIRS--LHSKVPVK-NIVKTVEGLSRFETDIPKLAFTANCLNDVSELFKASKL 170
Query: 176 LSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSL-----KGTPVLGLPTVESLRQTYK 230
+ + + I +G GL S++LS K N +VY K L E+L + Y
Sbjct: 171 IKNQEY--ILSVMGPYGLSSRILSNKLNSQIVYTFTPEYIKKNKLEQELIDPETLEELYG 228
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
I+ +T ++G+I K V S P +HN F+ N N +Y+P+ K+ +
Sbjct: 229 FSKIDEETSLYGVIGKDVNTSLSPQIHNKGFKRKNLNSVYIPISAVSSKEALDFANLLKI 288
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G SV P+K ++ + + ++ I AVNT++ + K GYNTD + A+ + +
Sbjct: 289 KGLSVTAPFKSEIIPLINSISEASKFIGAVNTLV--SENKKWFGYNTDVDGFQQALMEFL 346
Query: 351 KE---RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 407
E R YK G V++ G + IF+ E+AK++
Sbjct: 347 NEKDLRKYKVAIIGAGGAARAVAEVISSLHG--------------KACIFNRTAEKAKNI 392
Query: 408 ASDVMGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
A + D +N + ++ T GM P+ P++ T + VF+ +Y
Sbjct: 393 A-EKYKFKWALLDPINIKQLHAFSELIIQTTNAGMEPDIYMDPLNFYTFTGKEKVFELIY 451
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
P T++LK A AG + +G +M QA QF F GKE
Sbjct: 452 RPETTKMLKRARTAGCQVCNGYKMLEYQAYHQFKAFAGKE 491
>gi|257898584|ref|ZP_05678237.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
gi|257836496|gb|EEV61570.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com15]
Length = 284
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM D+ P+ + ++ L
Sbjct: 167 FEQLSYRTSCEIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|365894088|ref|ZP_09432248.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
gi|365425153|emb|CCE04790.1| Shikimate dehydrogenase (modular protein) [Bradyrhizobium sp. STM
3843]
Length = 517
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 137/271 (50%), Gaps = 27/271 (9%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-----DDLKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V + L+ FAG +V
Sbjct: 242 GLIGAPIKHSASPAMHEEAASALGLRCHYQLIEVAGADRERLRGLLDGVRQMGFAGVNVT 301
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
FPYKEAV++ DE+ P A+AI AVNT++ R +G+L+G+NTD A+ +
Sbjct: 302 FPYKEAVVELLDELAPEAKAIGAVNTVVVR--EGRLVGHNTDTTGFARAVAPLV------ 353
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS---DVM 412
TAS P+A L GAGG G+A+AF S G + + I D D +A +LA+ D
Sbjct: 354 --TASGRGPVA-----LVGAGGVGKAIAFALASHGVSELRIMDSDLVKANALAALLCDHP 406
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
G + D ++ L N TP+GM PN D PV E L V DAVY+P T L
Sbjct: 407 GVS--VADNVDAALRGAVGLVNGTPVGMLPNRDS-PVPETLLHAGLWVADAVYSPLWTPL 463
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
L A+ GA ++SG ++ + QA F LFTG
Sbjct: 464 LSAAKTKGAQVMSGRDLAIYQAADAFQLFTG 494
>gi|255525064|ref|ZP_05392009.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
gi|255511217|gb|EET87512.1| shikimate 5-dehydrogenase [Clostridium carboxidivorans P7]
Length = 289
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 150/299 (50%), Gaps = 31/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 289
+ I+ T ++ LI PVGHS P ++N +F+ + + Y+ + ++ + + + +
Sbjct: 3 KRISGTTALYSLIGTPVGHSGSPAMYNYSFQKLGVDSAYLAFDISLEKVPDAIAAMKTLN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V+K+ DE+ P A+ + AVNTI+ ++GKL G TD + ++++
Sbjct: 63 IKGSNVTMPCKSEVVKYMDELSPAARIVGAVNTIVN--NNGKLTGNITDGVGFVRSLKEN 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF----- 401
G + G+ + GAGGA A+ GA+ + IF+I DF
Sbjct: 121 -------------GVDVKGKNITIIGAGGAATAIQVQCALDGAKEISIFNIKDDFYKRAE 167
Query: 402 ERAKSLASDVMGAARPFEDILNFQP--EKGA---ILANATPLGMHPNTDRVPVSEETL-R 455
E + L +V D+ + Q EK A IL NAT +GMHP+ D P+ + + R
Sbjct: 168 ETIEKLKQEVPQCVVELYDLEDRQKLREKIASSNILVNATKVGMHPHEDESPIKDNAVFR 227
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P++T+ LKDAEA G V G M L Q F L+TG E P + + E+
Sbjct: 228 KDLVVSDTVYNPKQTKFLKDAEAVGCKTVDGTGMLLWQGAEAFKLYTGLEMPAKEVEEL 286
>gi|51893090|ref|YP_075781.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
gi|81692083|sp|Q67N06.1|AROE_SYMTH RecName: Full=Shikimate dehydrogenase
gi|51856779|dbj|BAD40937.1| shikimate 5-dehydrogenase [Symbiobacterium thermophilum IAM 14863]
Length = 294
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 151/295 (51%), Gaps = 31/295 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTF----RHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
++ G++ PV HS P +HN F H Y VP L+K + + G +
Sbjct: 13 RILGILGHPVAHSASPAMHNAAFAAQGMHAMYGAFDVP--PSQLEKAIAGIRALGLLGVN 70
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KEAVM + D+V P A+ + AVNTI+ R G+LIGYNTD + ++E ERG
Sbjct: 71 VTIPHKEAVMAYLDDVAPTARQVGAVNTIVNR--GGRLIGYNTDGWGFLLSLE----ERG 124
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG 413
+ +AGR V+ GAGGA RA+A G AR+ I + +RA+ LA+D+
Sbjct: 125 VR---------VAGRNAVVLGAGGAARAVALHLGMAGVARLTIINRSRQRAEFLAADLAR 175
Query: 414 A--------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAV 464
A A P + + ++ N TPLGM P+T+ P+ + L + +V+D V
Sbjct: 176 AKTPVRAEVADPGSEEARAALAEAGLVVNCTPLGMEPDTESTPLEDVGLLPAHCVVYDTV 235
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +TRLL++A G I V+G+ M + Q + + G+ P + MR LA
Sbjct: 236 YRPLETRLLREARQHGLITVNGLAMLVHQGACAWEYWFGRRGPVDVMRTAALAAL 290
>gi|374603053|ref|ZP_09676038.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
gi|374391366|gb|EHQ62703.1| shikimate 5-dehydrogenase [Paenibacillus dendritiformis C454]
Length = 297
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 21/289 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ T VF +I P+ HSK P++HN R + N +Y V + L++ +
Sbjct: 16 IDSSTAVFAVIGDPIKHSKSPLMHNAALRELGLNAVYTAFHVAPEQLEQAIQGMRALGIG 75
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAVM + DEV A I AVNTI+ R +G+LIGYNTD + ++++ +
Sbjct: 76 GMNVTIPHKEAVMAYLDEVDESASVIGAVNTIVNR--NGRLIGYNTDGLGFVRSLQEEMI 133
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
S L +L GAGGA R +A+ G R + I + RA++LA D
Sbjct: 134 ------------SDLRESRILLIGAGGAARGIAYALLKAGCRRLHIANRTLGRAEALAHD 181
Query: 411 VMGAARPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ L +P A I+ + T +GMHP+ D VP + L +V D VY
Sbjct: 182 LSAFGTVSAVQLGERPAIDAHEVDIVIHTTSVGMHPDVDAVPFDPDWLLPDMIVSDIVYN 241
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
P +T LL++A G SG+ MF+ Q L+TG AP MRE V
Sbjct: 242 PLETALLREASKRGCRPHSGLGMFVYQGAIALELWTGAAAPAALMREQV 290
>gi|333371747|ref|ZP_08463689.1| shikimate dehydrogenase [Desmospora sp. 8437]
gi|332975676|gb|EGK12562.1| shikimate dehydrogenase [Desmospora sp. 8437]
Length = 283
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 147/291 (50%), Gaps = 26/291 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++A T+ GLI PV HSK P + N FR +Y+ V ++L + + S F
Sbjct: 3 LDAVTEKTGLIGHPVAHSKSPEMMNEAFRREGLPWVYLAFDVASEELGRAVAGLKSLGFR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G++V P+K AVM+ DEV A+ I AVNT+I R +G+LIG NTD + E ++
Sbjct: 63 GWNVTIPHKVAVMEHLDEVEESAREIGAVNTVIHR--NGRLIGTNTDGAGYL---ESLVR 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E G+ + GR V+ GAGGA RA+ + GA + R + A D+
Sbjct: 118 ETGFD---------VKGRRVVILGAGGAARAVGYTLARAGAEQIGI---VNRTEKKAQDL 165
Query: 412 MGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
R + P + +L T +GMHP+ + PV +L LV D +
Sbjct: 166 ADHLRRWTRADGISPGEADTAIREADLLVQTTSVGMHPHPEGCPVDPASLHKDLLVSDLI 225
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
Y PR+TRLL++A+ GA + SG+ M L Q F +TG++AP E M E++
Sbjct: 226 YHPRQTRLLQEAKTRGARVHSGLGMLLHQGALAFERWTGRQAPVERMGEVL 276
>gi|302674061|ref|XP_003026716.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
gi|300100400|gb|EFI91813.1| hypothetical protein SCHCODRAFT_83545 [Schizophyllum commune H4-8]
Length = 1635
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 149/532 (28%), Positives = 233/532 (43%), Gaps = 80/532 (15%)
Query: 36 GADVVEIRLDCINNFQPG------------KDLEIILTKKP-LPVLIVYRPKWAGGLYEG 82
G D VE+R+D + + Q G +D +L + LP++ R K GG +
Sbjct: 1132 GVDAVELRVDLLRSPQGGSAGVYIPPAAYVRDQVALLRRATNLPIVYTVRTKAQGGAFPD 1191
Query: 83 DEHKRLEALHLAEDL-GADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
D+ AL G +Y+D E+ + S+ + Q ++ + I S + D D
Sbjct: 1192 DQSAAAAALLDLALRLGVEYIDVEISLPSDHI-HQLVKNKGYAQLIASWH-DWTGAMRWD 1249
Query: 142 LGYLVSR--MQATGADIIKLVFSVNDITE-IARIFQLLSHCQVPIIAYSVGERGLVSQLL 198
+ ++ AT DI+K+V N + + +A + +H + P+IA ++GE G +S++L
Sbjct: 1250 GADVAAKYAQAATFGDIVKIVGKANALEDNLALLDFARAHDRKPLIALNMGEAGQMSRVL 1309
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPIL 256
F V S P P S Q + H+ K F L P+ HS P L
Sbjct: 1310 GTCF----VPVSHPKLPFKAAPGQLSFAQIQQALHLLGALPAKKFYLFGTPIAHSMSPTL 1365
Query: 257 HNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
HN F + Y+ + D++K + S+PDF G SV P+K V+ DE+
Sbjct: 1366 HNTGFAALGLPHTYSLLETSTVGDEIK---AAVSAPDFGGASVTIPFKLDVIPLLDELSD 1422
Query: 313 LAQAIAAVNTIIRRPSDGKLI--GYNTDCEASITAIEDAIKER--GYKNGTASFGSPLAG 368
A+ I AVNTII D K I G NTDC I+ A+ R G + G+A
Sbjct: 1423 AAKVIGAVNTIIPIQRDSKRILRGDNTDC----LGIQAAVTSRLAGARVGSA-------- 1470
Query: 369 RMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS-------------DVMGA 414
++ GAGG RA + + GA + +F+ +A+ L + D G
Sbjct: 1471 ---LVLGAGGTARAAIYALHALGASPIYLFNRTRSKAEELHAAFPNAPVLVLDKLDAWGE 1527
Query: 415 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ----LVFDAVYTPRKT 470
P +++ A A G+H +P + L +Q +V D Y P +T
Sbjct: 1528 NTPAPNVIVSCVPAAATTTEAGSEGLH-----LP---QGLLAHQNGPAVVVDMAYKPAET 1579
Query: 471 RLLKDAEAAGA---IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL+ A+A G V GVE+ L Q QF L+TG+ P+E + + V AK+
Sbjct: 1580 PLLQLAKAVGGEHWSTVPGVEVLLEQGFVQFELWTGRACPRESVSKTVWAKY 1631
>gi|145577917|gb|ABP82677.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
thompsoni]
Length = 238
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 132/250 (52%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L G+GGA RA+ F G + + + + +AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFQTKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|298531015|ref|ZP_07018416.1| shikimate 5-dehydrogenase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509038|gb|EFI32943.1| shikimate 5-dehydrogenase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 268
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 25/269 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+ +G++ + +GHS P LHN F+ +Y+ ++ +L F +G SV
Sbjct: 3 QAYGVLGRTLGHSLSPYLHNCAFQAAGMKRVYLKWEIEPENLGDFIRAVRILPLSGASVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM++ D + P A + AVNT+ L G NTDC + IED +
Sbjct: 63 IPYKEDVMEYLDYISPEASDMGAVNTLYWHRKS--LCGTNTDCRGFMAPIEDLQLDSA-- 118
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 415
++ GAGGA RA+ +G K G + + + + ++A ++A + +
Sbjct: 119 ---------------LILGAGGASRAVLYGLKRMGISNIYLTNRSKKKALAMAGEFNVKS 163
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
P+++ K +L N TPLG + + E ++ +++V+D VY P +TRLL+
Sbjct: 164 IPWDERYRL---KADLLVNTTPLGTAGDLQDLSPWESSIFPFKIVYDLVYNPLQTRLLQQ 220
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
A A GA VSG+ MF+ QA+ QF ++TG+
Sbjct: 221 ARAHGAHTVSGLSMFVHQALKQFKIWTGQ 249
>gi|256811286|ref|YP_003128655.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
gi|256794486|gb|ACV25155.1| shikimate 5-dehydrogenase [Methanocaldococcus fervens AG86]
Length = 282
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 160/295 (54%), Gaps = 25/295 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+A TKV GLI PV HS PI+HN F+ N +YV V ++LK +
Sbjct: 2 IDAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ AQ I AVNTI + +GK IGYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDRDAQLIGAVNTI--KIENGKAIGYNTDGIGARKALEEEIG 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E + G+ V+ GAGGA RA+AF ++ ++I + E+A+ LA ++
Sbjct: 120 E-------------VKGKNIVIYGAGGAARAVAFDL-AKDNNIIIANRTVEKAEKLAREI 165
Query: 412 MGA-ARPF-EDI----LNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 464
+ F E+I LN + ++ NATP+GM+PN D P V + LR+ +V D +
Sbjct: 166 AEKLNKKFGEEIKFGGLNVDLDDIDVVINATPIGMYPNVDVEPIVKADKLREDMVVMDLI 225
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LLK+A+ A A ++G+ M + Q F ++TG E E M+ ++ K
Sbjct: 226 YNPLETVLLKEAKKANAKAINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI 280
>gi|383753808|ref|YP_005432711.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365860|dbj|BAL82688.1| putative shikimate dehydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 283
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 139/283 (49%), Gaps = 28/283 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRH--VNYNGIYVPMFVDDLKKFFSTYSSPDFA 291
I T+ G+I P+ HS P+L N ++YN +P+ + L + + + +
Sbjct: 2 ITGKTQNLGVIGWPIAHSLSPVLQNAAIEKAGIDYNYTALPVAPEKLAEAVTGLKALHYR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G++V P+K A+M DE+ A+ I AVNT++ +GKL G+NTDC
Sbjct: 62 GWNVTIPHKTAIMPLLDEIDEDARIIGAVNTVVN--DNGKLKGFNTDC------------ 107
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 410
G+ + + G+ VL GAGGA RA+ +G K+ VV+ + +A+SLA++
Sbjct: 108 -LGFMGALTKRQAAIKGKKVVLLGAGGAARAVIWGLIKAEAQEVVLGVRNPAKAESLAAE 166
Query: 411 VMGAARPFEDILNFQPEK-------GAILANATPLGMHPNTDRVP-VSEETLRDYQLVFD 462
+ + +++ E+ A+L N TPLGM P D P V + +V+D
Sbjct: 167 FSRYGK--VTVCHWESEEFTQVLADCALLVNTTPLGMTPKVDACPPVDWSKVNPSAVVYD 224
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+YTP +T L+ A G +I++G EM Q L+TG E
Sbjct: 225 IIYTPAETLFLRQAREHGHVIINGEEMLAGQGAAALQLWTGCE 267
>gi|397690320|ref|YP_006527574.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
gi|395811812|gb|AFN74561.1| shikimate 5-dehydrogenase [Melioribacter roseus P3M]
Length = 293
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 140/291 (48%), Gaps = 34/291 (11%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAG 292
N +TK+ G+I P+ HS P++HN F N IY+P V LK + G
Sbjct: 8 NHNTKIIGIIGHPIKHSFSPLMHNLAFELTKLNYIYLPFDVPPTLLKDSLKGMIALGIKG 67
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
F+V P KE V+ ++ A I AVNTI+ +G L GYNTD I ++
Sbjct: 68 FNVTIPLKEKVIPLLKDISEEANIIGAVNTIVN--DEGVLRGYNTDVLGVIESLN----- 120
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI------------D 400
+ L + GAGGA R++ + A R +V +I +
Sbjct: 121 --------PYKEELQNSAVTVIGAGGAARSVIY-ALIRHFKVERINIVNRTEQIAESLKE 171
Query: 401 FERAKSLASDVMGAARPFEDILN-FQPEKGAILANATPLGMHPNTDRVPVS-EETLRDYQ 458
+ K L +++ D++N F K ++ N T +GM P+ D + E+ Q
Sbjct: 172 YFSTKMLFNNIKAYPLMPPDLVNTFNSSK--LIVNTTSMGMFPDIDDAATTIPESFNKEQ 229
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
+VFD VYTP KT+LLK AE+ GA I++G+ MF+ Q F L+TG+E PK+
Sbjct: 230 IVFDVVYTPIKTKLLKLAESRGARIITGLRMFVEQGAKSFELWTGEEMPKD 280
>gi|392960610|ref|ZP_10326077.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|421054632|ref|ZP_15517598.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|421058184|ref|ZP_15520904.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
gi|421067306|ref|ZP_15528799.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|421071495|ref|ZP_15532612.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392440621|gb|EIW18294.1| shikimate 5-dehydrogenase [Pelosinus fermentans B4]
gi|392447014|gb|EIW24280.1| Shikimate dehydrogenase [Pelosinus fermentans A11]
gi|392449968|gb|EIW27032.1| Shikimate dehydrogenase [Pelosinus fermentans A12]
gi|392454854|gb|EIW31668.1| Shikimate dehydrogenase [Pelosinus fermentans DSM 17108]
gi|392461302|gb|EIW37514.1| Shikimate dehydrogenase [Pelosinus fermentans B3]
Length = 281
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 158/290 (54%), Gaps = 26/290 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I + TK G++ P+GHS PI+HN F+ ++ + +Y+P+ V ++L + + + +F
Sbjct: 2 ITSKTKKIGILGWPLGHSLSPIMHNAAFKSLHLDYVYIPLPVHPENLAQAVAGLKAMEFT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K +M + DE+ AQ + AVNT++ + DGK IGYNTD
Sbjct: 62 GVNVTIPHKVEIMSYLDEIDFSAQLVGAVNTVVIK--DGKTIGYNTDA------------ 107
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERA----KS 406
+G+ S G + + ++ GAGGA RA+A G G + ++I + E+A K
Sbjct: 108 -QGFVQSILSNGIKITEQTAIILGAGGAARAVACGLFQNGIKNIIIGARNLEKAQQFVKL 166
Query: 407 LASDVMGAARPFEDILNFQP--EKGAILANATPLGMH-PNTDRVPVSEETLRDYQLVFDA 463
+++V A +ED FQ ++ IL N+TP+GM +T+ +P+ ETL V D
Sbjct: 167 FSTNVDIQAFDWED-SGFQNLLQECDILINSTPIGMSVHDTEVLPIPWETLNPEAAVCDL 225
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+Y P KT+LL AE G I ++G+ M + Q F L+T ++ P++ M E
Sbjct: 226 IYNPSKTQLLLSAEEHGHIAINGLGMLIEQGALAFELWTSEQGPRQIMSE 275
>gi|387783729|ref|YP_006069812.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
gi|338744611|emb|CCB94977.1| shikimate dehydrogenase [Streptococcus salivarius JIM8777]
Length = 285
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 33/291 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 407
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRDYQ 458
++ A D+ FQ E G +L NAT +GM + + +P+ +T +
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGM--DGESLPIPTDTKFPEGL 222
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
LV D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 223 LVADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|150400882|ref|YP_001324648.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
gi|166219472|sp|A6UU64.1|AROE_META3 RecName: Full=Shikimate dehydrogenase
gi|150013585|gb|ABR56036.1| shikimate 5-dehydrogenase [Methanococcus aeolicus Nankai-3]
Length = 278
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 33/295 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
IN+ TK+ GLI PV HS P +HN + + N +Y+ V+ +LK + + +
Sbjct: 2 INSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ D++ A+ I AVNT+ + + K IGYNTD + +IE+ I
Sbjct: 62 GFNITIPHKIEIMKYLDKIDNDAKLIGAVNTV--KIENNKAIGYNTDGIGARLSIEEIIG 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E N ++ GAGG+ RA+ ++ + I + E+A+ +A+D+
Sbjct: 120 EVKDYN-------------ILVIGAGGSSRAVCC-ELAKNNNLTIINRTVEKAEIIANDL 165
Query: 412 ---------MGAARPFEDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLRDYQLVF 461
G ++ NF I+ N T LGM+PN D + P+S + ++ +V
Sbjct: 166 SNKLNNAVYYGGLNHNYNMANFD-----IIINTTSLGMYPNVDNKPPISMQNIKKDAVVM 220
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
D +Y P++T LK+A+ G ++G+ M + Q F ++TG + M+ ++
Sbjct: 221 DLIYNPKETLFLKEAKEKGCATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAII 275
>gi|431429706|ref|ZP_19512808.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|431759137|ref|ZP_19547752.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
gi|430587940|gb|ELB26151.1| shikimate 5-dehydrogenase [Enterococcus faecium E1630]
gi|430626334|gb|ELB62910.1| shikimate 5-dehydrogenase [Enterococcus faecium E3346]
Length = 284
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTYDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMPSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM D+ P+ + + L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|145577909|gb|ABP82673.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar higo]
Length = 238
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 132/250 (52%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L G+GGA RA+ F G + + + + +AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVNKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPHVEYTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|354582185|ref|ZP_09001087.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
gi|353199584|gb|EHB65046.1| shikimate 5-dehydrogenase [Paenibacillus lactis 154]
Length = 284
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 22/286 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
G++ P+GHSK P +HN +N G Y+P+ + + L + + F G +V P
Sbjct: 13 LGVMGDPIGHSKSPAMHNAALAALNLQGAYIPLHIRPERLGDAIESVKTLGFRGVNVTIP 72
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYKN 357
+K VM++ D + A I AVNTI+ +G+L GYNTD + ++ E+A +
Sbjct: 73 HKVEVMRYLDAIDEGAARIGAVNTIVN--DNGRLTGYNTDGIGYVRSLKEEACPD----- 125
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAAR 416
L G+ + GAGGA R + + + + I + ++AK+LA + A
Sbjct: 126 --------LKGKRIAVLGAGGAARGIIYALIGEQPESISIINRTEDKAKALAQEWGTMAE 177
Query: 417 PF---EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
E+ + ++ N T +GMHP +PV E + + +V D +Y P KT LL
Sbjct: 178 LHGCGEEHAKEVLSRAEVIINTTSVGMHPRISEMPVHPEWIPEGAVVSDLIYNPLKTELL 237
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+E + G+ MF+ Q +TG AP E M+E VLA
Sbjct: 238 LQSEQRNCTVHGGLGMFINQGAYALEYWTGLRAPVEAMKEAVLASL 283
>gi|428313606|ref|YP_007124583.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
gi|428255218|gb|AFZ21177.1| shikimate dehydrogenase [Microcoleus sp. PCC 7113]
Length = 293
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 29/295 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
+ I TK+ G+I P+ HS P++HN + + IY+P + DL + +++
Sbjct: 1 MSQITGKTKLLGVIGDPIEHSLSPVMHNAAIAEMGLDYIYLPFPIKTADLGVAIAGFAAI 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GFSV P+K+A++ EV +A+ AVNT+ R ++ G NTD E + ++
Sbjct: 61 GVQGFSVTIPHKQAIISLLSEVSAIAKLTGAVNTVWR--TEQGWSGTNTDVEGFVAPLQA 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSL 407
R + T V+ G GGA RA+ G G A + + + ++
Sbjct: 119 L--NRDWSQSTP-----------VILGHGGAARAVVVGCTQLGCAEIHVVGRNVQKLSQF 165
Query: 408 ASDVMGAARP-------FEDILNFQPEKGAILANATPLGMHPNTDRVPV---SEETLRDY 457
+ A P ++++ P+ ++ N+TP+GM+PN D+ P+ + E LR
Sbjct: 166 QQSWVNAPLPITLNVHRWDELPELLPQAD-LVVNSTPVGMYPNVDQSPLDAAAMELLRPD 224
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+ +D +YTP T+ L+ A+ GA+ + G+EM ++Q ++ + P + MR
Sbjct: 225 AIAYDLIYTPNPTQFLQQAQEQGAVAIDGLEMLVQQGAAALKIWVEQTPPVDIMR 279
>gi|312863765|ref|ZP_07724003.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
gi|311101301|gb|EFQ59506.1| shikimate dehydrogenase [Streptococcus vestibularis F0396]
Length = 285
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 33/291 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 407
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRDYQ 458
++ A D+ FQ E G +L NAT +GM + + +P+ +T +
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQDDLLVNATSVGM--DGESLPIPTDTKFPEGL 222
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
LV D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 223 LVADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|384208166|ref|YP_005593886.1| shikimate 5-dehydrogenase [Brachyspira intermedia PWS/A]
gi|343385816|gb|AEM21306.1| shikimate 5-dehydrogenase [Brachyspira intermedia PWS/A]
Length = 296
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 152/299 (50%), Gaps = 33/299 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
INA+T + GL + P HS PI+HN F +N N IY+ VD +LK+ ++ + +
Sbjct: 15 QINAETILTGLFASPSKHSISPIMHNEAFNKLNLNYIYLAFEVDKSNLKEAVNSIKTLNM 74
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ P K+ V+K+ D++ A+ +VNTI+ +G L GY+TD E I ++E+
Sbjct: 75 RGGNLSMPNKKEVIKYLDKISEAAELSQSVNTIVN--DNGILTGYSTDGEGFIKSLEE-- 130
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAKSL 407
E+ + + + + G GGA A+ A G + + +F D ++ K +
Sbjct: 131 -EQVF----------IKDKNITILGTGGASIAIISQAALYGVKEIYVFKRDTNWNEQKKI 179
Query: 408 ASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDY 457
++ +DIL + + IL NAT +GM + V + E+T R+
Sbjct: 180 IDNIASKTNCNITLYSLENKDILKSKIDNSYILINATSVGMK---EDVSIIEDTSFFRND 236
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D +Y P KT+LLK AE G I++G+ M L Q F L+T K+ P E+++ I+
Sbjct: 237 LVVSDCIYHPAKTKLLKIAEKEGCKIINGMGMLLYQGALAFELWTNKKMPVEYVKNIIF 295
>gi|145577903|gb|ABP82670.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 131/249 (52%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEEALGEAVKGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
+ PLA+ I AVNT++ R DGKLIGYNTD + A++ +I E PL
Sbjct: 61 GIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-SISE-----------DPLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + I + ++AK+L S M L E
Sbjct: 107 KRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMANVNSHALSLECAAE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I+ T +GMHP+ + P+ + + +V D +Y P +T++L DA+ GAII
Sbjct: 167 NQGEYDIIIQTTTIGMHPHVEYTPLEIRSSKQGTIVSDIIYNPFETKILGDAKEQGAIIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|159906101|ref|YP_001549763.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
gi|238687001|sp|A9AB08.1|AROE_METM6 RecName: Full=Shikimate dehydrogenase
gi|159887594|gb|ABX02531.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C6]
Length = 279
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 152/293 (51%), Gaps = 23/293 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TK+ GLI PV HS PI+HN + + N Y+ V ++LK S + A
Sbjct: 2 IDSKTKLIGLIGHPVEHSFSPIMHNAAIKDLGINYTYLAFDVSEENLKYIVSGAKALQIA 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ A++I AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNVTIPHKINIMKYLDEIDEDAKSIGAVNTV--KIENGKTIGYNTDGIGVKRALEE--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
K+G + ++ G+GGA RA++F ++ + I + + E+AK L+ ++
Sbjct: 117 ----KSGILIN------KNILIIGSGGASRAVSFEL-AKENNLTIVNRNIEKAKILSEEL 165
Query: 412 MGAARPFEDI----LNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVYT 466
+ I LN + I+ N TP+GM+P+TD PV ++ +V D +Y
Sbjct: 166 STKLKKENSIKYGALNIDIKNFDIIINTTPVGMYPDTDVNPVIPLNDIKKSAVVMDLIYN 225
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P + LK+A G ++G+ M + Q F ++TGK+ M++ + +K
Sbjct: 226 PLEPVFLKEAMKYGVETINGLGMLVYQGAVSFQIWTGKKPDVYVMKKAINSKI 278
>gi|255542476|ref|XP_002512301.1| shikimate dehydrogenase, putative [Ricinus communis]
gi|223548262|gb|EEF49753.1| shikimate dehydrogenase, putative [Ricinus communis]
Length = 146
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 86/126 (68%)
Query: 390 RGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPV 449
+GARVV+ + F++AK LAS V G A ++ +F PE+G ILAN T +GM P D P+
Sbjct: 17 KGARVVVANRSFDKAKELASKVGGQAMTLAELKDFHPEEGMILANTTSVGMKPRIDDTPL 76
Query: 450 SEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
+E L+ Y LVFDA+YTP+ TRLL++A+ GA V G EMF+ QA QF FTG APK+
Sbjct: 77 PKEALKHYSLVFDAIYTPKLTRLLREAQECGATTVYGTEMFINQAFVQFERFTGLPAPKQ 136
Query: 510 FMREIV 515
+R+++
Sbjct: 137 LIRDVL 142
>gi|427720930|ref|YP_007068924.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
gi|427353366|gb|AFY36090.1| shikimate dehydrogenase [Calothrix sp. PCC 7507]
Length = 301
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 150/302 (49%), Gaps = 38/302 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRH-------VNYNGIYVPMFVD--DLKKFFST 284
I TK+ G+I PV HS P++HN + + +Y+P ++ +L +
Sbjct: 6 ITGKTKILGVIGHPVEHSLSPLMHNAALAQMVEDIAQLGLDYVYLPFPIEPQNLAVAIAG 65
Query: 285 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 344
+++ GF+V P+K+A++ E+ PLAQ++ AVNT+ R+ + + +G NTD E I
Sbjct: 66 FAAVGVVGFNVTIPHKQAIIPLLSEISPLAQSVGAVNTVTRQ--NNQWVGTNTDVEGFIV 123
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFER 403
++ ++ + ++ V+ G GGA RA+ G G A + I + E+
Sbjct: 124 PLQ------------TTYHQDWSQKIAVILGNGGAARAVVAGCHQLGFAEIHIVGRNHEK 171
Query: 404 AKSLASDVMGAARPFEDILNFQ-----PE---KGAILANATPLGMHPNTDRVPVSEE--- 452
+ + + P + L P+ + +L N TP+GM+P + P+S E
Sbjct: 172 LTAFRNS--WSNSPLNENLQVHEWLELPKLIPQADLLVNTTPIGMYPKINDSPLSAEEMS 229
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFM 511
+L + +D +Y P+ T+ L+ A+ GAI + G+EM ++Q + ++ +EA P + M
Sbjct: 230 SLSPNAIAYDLIYIPQPTQFLQQAQKQGAITIDGLEMLVQQGVAALKIWLQREAIPVDVM 289
Query: 512 RE 513
R+
Sbjct: 290 RQ 291
>gi|225028702|ref|ZP_03717894.1| hypothetical protein EUBHAL_02981 [Eubacterium hallii DSM 3353]
gi|224954012|gb|EEG35221.1| shikimate dehydrogenase [Eubacterium hallii DSM 3353]
Length = 636
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 27/307 (8%)
Query: 225 LRQTY-KVEHI---NADTKVFGLISKPVGHS-KGPILHNP-TFRHVNYNGIYVPMFVDDL 278
LR Y + E+I N ++ GL PV + GP++ + +NY I + + ++L
Sbjct: 120 LRSKYFRKEYILSKNYRAELVGLFGNPVDENPTGPMMEAGFAAQGLNYRYITMKVEKENL 179
Query: 279 KKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTD 338
K + + G ++ P+K AV+ F DE+ P A+ I AVN+I R DG+LIG NTD
Sbjct: 180 KDAIAGIRAIGMRGLNLTIPHKIAVIPFLDELSPAAKIIGAVNSI--RVQDGQLIGENTD 237
Query: 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF 397
+ +T++ + G L GR+ + G+GGA RA+A GA V I
Sbjct: 238 GKGFVTSLMET-------------GIELNGRIITVLGSGGAARAVAVECAISGAETVNIV 284
Query: 398 DIDFERAKSLASDVMGAARPFEDILNFQ-----PEKGAILANATPLGMHPNTDRVPVSEE 452
+ ER K LA + ++ PE +L N T +G++P+ ++ ++ E
Sbjct: 285 ARNEERGKELADLISEKTEAQGVYFTWKGSVPIPEGTEVLVNCTNVGLYPDENKPDITYE 344
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+R V D V+ P +T+ LK+A+A GA V+G+ M + QA + L+T APK+ M+
Sbjct: 345 DIRKNMTVCDVVFNPPETKFLKEAKARGAATVNGLGMLVNQAALNYCLWTENMAPKDMMK 404
Query: 513 EIVLAKF 519
E +L +F
Sbjct: 405 EALLREF 411
>gi|282891758|ref|ZP_06300239.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498342|gb|EFB40680.1| hypothetical protein pah_c197o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 674
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 214/471 (45%), Gaps = 35/471 (7%)
Query: 37 ADVVEIRLDCINNFQPGKDLEI--ILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLA 94
AD+VE+RLD N LE+ I + +P++ R + GG + E R+E ++
Sbjct: 25 ADLVELRLDLFVNVDETSLLELKSIFS---IPMIFTLRSQAQGGNFNQSEESRVEHIYRL 81
Query: 95 EDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154
L Y+D E + +++ + SS + I+S + ETP E+ +L + MQ A
Sbjct: 82 AALKPFYLDLESHMPEDVV-RDISSLHPEIQLILSYHNLQETP--ENFDHLYTDMQKIPA 138
Query: 155 DIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT 214
K+ + + R+ + +I S+G G + ++L P N + SL
Sbjct: 139 HFYKIAVTAKSSVDTMRLLVWSKNQNAKLIPISMGPNGQIGRILGPIVNHPFTFASLDED 198
Query: 215 PV--LGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV- 271
P LG + + L + Y+ + + T ++GLI PV S HN + +YV
Sbjct: 199 PKNPLGQLSAKLLIEQYRYRTLTSQTAIYGLIGDPVNLSISDETHNAVLAACGMDAVYVK 258
Query: 272 -PMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG 330
P+ +L F + G SV P K+++M F D + A+ I AVNT+ + +
Sbjct: 259 IPVKSTELSPFLELAKALPIRGLSVTMPLKKSIMSFIDHLDVKAEKIGAVNTL--QFKED 316
Query: 331 KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390
++ G+NTD ++ A+E K G + G+ V+ GAGGA RA+A+ A +
Sbjct: 317 QIYGFNTDGMGAMEALET-------KCG-------IQGKHVVIIGAGGAARAIAYEAVQK 362
Query: 391 GARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS 450
A V + + E+A +A + ++ IL N T + M P++
Sbjct: 363 KALVTVINRSPEKAYEIAHAFGCQGKGLHEMPACAQVGYDILINCTSVPM-------PIA 415
Query: 451 EETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLF 501
E + + V D P+ + L++A G ++ G +MF+ QA+GQF L+
Sbjct: 416 FEDILPHVFVMDIKTKPKVSLFLENALKKGCQVIFGYQMFIAQALGQFKLW 466
>gi|410460448|ref|ZP_11314126.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
gi|409927063|gb|EKN64209.1| shikimate 5-dehydrogenase [Bacillus azotoformans LMG 9581]
Length = 279
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 22/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGL+ PVGHS PI+HN F + + Y V ++L+ + + +GF+V
Sbjct: 3 KLFGLLGHPVGHSMSPIMHNDQFSFLGLDCYYHAFDVHPNELENAVNGIKALGLSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +MK+ DE+ A I AVNT++ R DGKL GYNTD + +++
Sbjct: 63 IPHKVEIMKYLDEIDEEALQIGAVNTVVNR--DGKLYGYNTDGKGFAVSLQTIA------ 114
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD----V 411
G+ + ++ GAGGA R + GA + I + E+A+ L S+ V
Sbjct: 115 ------GADFLNKKMLIVGAGGAARGVFVTLARMGANAIDIANRTVEKAEELISNNPYRV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
AR ++ E I+ N T +GM P + +P+ ++ ++ D +Y P +T+
Sbjct: 169 QSNARSIKEAEKNLAEY-QIIINTTSVGMSPKIEELPLQLTNMQPGTILSDIIYNPLETK 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+ + AGA+ +G+ MF+ Q F ++T ++ M +IV+ +
Sbjct: 228 WLKEGKIAGAVTQNGIGMFVGQGALAFEMWTKEKPDYNRMEQIVMKQL 275
>gi|206580594|ref|YP_002240458.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288937158|ref|YP_003441217.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|290512580|ref|ZP_06551946.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
gi|206569652|gb|ACI11428.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae 342]
gi|288891867|gb|ADC60185.1| shikimate 5-dehydrogenase [Klebsiella variicola At-22]
gi|289774921|gb|EFD82923.1| shikimate 5-dehydrogenase [Klebsiella sp. 1_1_55]
Length = 287
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 406 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + D L + + IL NAT +GM P ++ + ++ LR
Sbjct: 168 ETVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSILF 287
>gi|284047672|ref|YP_003398011.1| shikimate dehydrogenase [Acidaminococcus fermentans DSM 20731]
gi|283951893|gb|ADB46696.1| Shikimate dehydrogenase substrate binding domain protein
[Acidaminococcus fermentans DSM 20731]
Length = 288
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 143/287 (49%), Gaps = 21/287 (7%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
HI+ T+ L+ P+ S + N + N +Y + L +
Sbjct: 2 HIDIHTRFITLLGDPLAQSFAARMQNRGYEAAGLNLVYFYTITGQEHLGDIVNGLRYMPV 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
AGF+V P K V+++ DE+ PL + + + NT+++ P DG+L GYNTD TA+ +A
Sbjct: 62 AGFAVTKPNKVKVLEYLDELDPLCRKMGSSNTVVKLP-DGRLKGYNTDGTGFYTALTEA- 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
G + F G+GGAGRA+ GA ++ I D+ E A+SL
Sbjct: 120 ------------GIDVTKERFFCFGSGGAGRAMCSVLAYHGATKIWITDLFPESARSLVE 167
Query: 410 DVMGAARPFEDILNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
D+ P +++ ++ + ++ NA+ +GM + + P+ E ++ Q FDA Y
Sbjct: 168 DINKNFAPVAEMVPYEDFSKVGEATVVLNASGVGMGQSIGKTPLPPEFIQKDQFYFDACY 227
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
P +TR L++AE AG +++G+ M L Q Q L++G++AP+E MR
Sbjct: 228 NPARTRFLENAEKAGCRVMNGLTMSLYQGTAQVELWSGQKAPEEAMR 274
>gi|424935106|ref|ZP_18353478.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|407809293|gb|EKF80544.1| Shikimate dehydrogenase 2 [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 292
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 30/307 (9%)
Query: 225 LRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFF 282
+R E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK
Sbjct: 1 MRIFVMAERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVV 60
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
+ + GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD
Sbjct: 61 QGFRAMKLRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGY 118
Query: 343 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---D 398
+ A+ +A G + G+ + GAGGA AL A G + + IF D
Sbjct: 119 MRALSEA-------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRD 165
Query: 399 IDFERAKSLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVS 450
F A+ + + F+ D L + + IL NAT +GM P ++ +
Sbjct: 166 KFFANAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLP 225
Query: 451 EET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
+++ LR +V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P +
Sbjct: 226 DDSFLRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVD 285
Query: 510 FMREIVL 516
+++ I+
Sbjct: 286 YIKSILF 292
>gi|300811908|ref|ZP_07092369.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497105|gb|EFK32166.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 311
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 31/300 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ T + GL++ P+ H+ P +HN F + NG Y+ +D+ L + D
Sbjct: 25 LDGHTILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTLDMR 84
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K+ V+ + D++ +Q AVNTI+ G L GY TD + A++
Sbjct: 85 GSNISMPNKKKVIPYLDKLDKTSQMCDAVNTIVNE--HGVLTGYTTDGMGWLRALK---- 138
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLA-- 408
G + G++ LAGAGGA +A A GA+ + IF++D ++
Sbjct: 139 ---------KDGQDVKGKIITLAGAGGAATPIAVTASLEGAKEIRIFNLDDDKWAQAVKN 189
Query: 409 -------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQ 458
+D + + ED +F+ + I +AT +GM+P D+ V + + +
Sbjct: 190 VETINKETDCVASVHHLEDKEDFKQSIAESDIYCDATSVGMNPLQDQTLVEDPSWFHEDM 249
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
+V D VY PRKT+L++ AE AG I +G+ M + Q F L+TGKE P ++++EI+ A
Sbjct: 250 VVSDTVYAPRKTKLMEVAEKAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIMDA 309
>gi|145577931|gb|ABP82684.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
roskildiensis]
Length = 238
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDARYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L GAGGA RA+ F G R + + + ++AK L + V A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVREIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q E I+ T +GMHP P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQ-ENYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMI 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|145577893|gb|ABP82665.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
gi|145577895|gb|ABP82666.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + + + ++AK L + M L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
+ I+ T +GMHP + P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|69249504|ref|ZP_00604998.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257878246|ref|ZP_05657899.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257880974|ref|ZP_05660627.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257889556|ref|ZP_05669209.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257892504|ref|ZP_05672157.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260559796|ref|ZP_05831975.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|261207823|ref|ZP_05922508.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289566376|ref|ZP_06446804.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|293560591|ref|ZP_06677079.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|293569865|ref|ZP_06680952.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|294621710|ref|ZP_06700874.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|314937722|ref|ZP_07845045.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|314942645|ref|ZP_07849473.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|314948840|ref|ZP_07852211.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|314950852|ref|ZP_07853922.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|314992913|ref|ZP_07858311.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|314995671|ref|ZP_07860762.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|383328271|ref|YP_005354155.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|389868552|ref|YP_006375975.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|406581268|ref|ZP_11056426.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|406583572|ref|ZP_11058628.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|406585881|ref|ZP_11060835.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|406591382|ref|ZP_11065666.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410937496|ref|ZP_11369356.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|415891282|ref|ZP_11549686.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|416142973|ref|ZP_11599688.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|424790457|ref|ZP_18217001.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|424795666|ref|ZP_18221490.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|424819259|ref|ZP_18244382.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|424857325|ref|ZP_18281485.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|424864847|ref|ZP_18288746.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|424950425|ref|ZP_18365589.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|424953710|ref|ZP_18368654.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|424956712|ref|ZP_18371476.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|424959170|ref|ZP_18373771.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|424963383|ref|ZP_18377611.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|424969022|ref|ZP_18382613.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|424969603|ref|ZP_18383161.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|424973123|ref|ZP_18386414.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|424976239|ref|ZP_18389343.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|424980094|ref|ZP_18392912.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|424984020|ref|ZP_18396574.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|424987351|ref|ZP_18399729.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|424990468|ref|ZP_18402680.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|424993800|ref|ZP_18405775.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|424997154|ref|ZP_18408921.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|425000132|ref|ZP_18411713.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|425004114|ref|ZP_18415443.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|425006313|ref|ZP_18417493.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|425009912|ref|ZP_18420895.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|425014063|ref|ZP_18424759.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|425016425|ref|ZP_18426989.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|425019992|ref|ZP_18430322.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|425024056|ref|ZP_18434145.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|425031046|ref|ZP_18436191.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|425034089|ref|ZP_18439001.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|425038010|ref|ZP_18442643.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|425040819|ref|ZP_18445261.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|425044491|ref|ZP_18448650.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|425049209|ref|ZP_18453074.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|425051105|ref|ZP_18454787.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|425062417|ref|ZP_18465577.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|427394923|ref|ZP_18887845.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430825333|ref|ZP_19443538.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430828586|ref|ZP_19446706.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430830533|ref|ZP_19448591.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430844277|ref|ZP_19462175.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430846256|ref|ZP_19464116.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430854634|ref|ZP_19472347.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430862200|ref|ZP_19479552.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430870903|ref|ZP_19483490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430959924|ref|ZP_19487059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|431008916|ref|ZP_19489356.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|431195518|ref|ZP_19500496.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|431228613|ref|ZP_19501754.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|431258926|ref|ZP_19505103.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|431540493|ref|ZP_19517950.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|431745997|ref|ZP_19534833.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|431748492|ref|ZP_19537250.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|431754638|ref|ZP_19543299.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|431765421|ref|ZP_19553935.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|431770633|ref|ZP_19559032.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|431773158|ref|ZP_19561490.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|431775980|ref|ZP_19564249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|431778556|ref|ZP_19566766.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|431782083|ref|ZP_19570221.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|431785527|ref|ZP_19573552.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|447913136|ref|YP_007394548.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
gi|68194130|gb|EAN08666.1| Quinate/Shikimate 5-dehydrogenase [Enterococcus faecium DO]
gi|257812474|gb|EEV41232.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,230,933]
gi|257816632|gb|EEV43960.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,502]
gi|257825916|gb|EEV52542.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,410]
gi|257828883|gb|EEV55490.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,408]
gi|260074020|gb|EEW62343.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium C68]
gi|260078206|gb|EEW65912.1| quinate/Shikimate 5-dehydrogenase [Enterococcus faecium TC 6]
gi|289161814|gb|EFD09686.1| shikimate 5-dehydrogenase [Enterococcus faecium D344SRF]
gi|291587613|gb|EFF19490.1| shikimate 5-dehydrogenase [Enterococcus faecium E1071]
gi|291598719|gb|EFF29772.1| shikimate 5-dehydrogenase [Enterococcus faecium U0317]
gi|291605414|gb|EFF34860.1| shikimate 5-dehydrogenase [Enterococcus faecium E1162]
gi|313590144|gb|EFR68989.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a01]
gi|313592556|gb|EFR71401.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133B]
gi|313596985|gb|EFR75830.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133A]
gi|313598582|gb|EFR77427.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133C]
gi|313642925|gb|EFS07505.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0133a04]
gi|313644783|gb|EFS09363.1| shikimate 5-dehydrogenase [Enterococcus faecium TX0082]
gi|364089488|gb|EHM32174.1| shikimate 5-dehydrogenase [Enterococcus faecium E4452]
gi|364094077|gb|EHM36288.1| shikimate 5-dehydrogenase [Enterococcus faecium E4453]
gi|378937965|gb|AFC63037.1| shikimate 5-dehydrogenase [Enterococcus faecium Aus0004]
gi|388533801|gb|AFK58993.1| shikimate dehydrogenase [Enterococcus faecium DO]
gi|402920798|gb|EJX41286.1| shikimate dehydrogenase [Enterococcus faecium V689]
gi|402924110|gb|EJX44343.1| shikimate dehydrogenase [Enterococcus faecium S447]
gi|402926323|gb|EJX46367.1| shikimate dehydrogenase [Enterococcus faecium R501]
gi|402929074|gb|EJX48868.1| shikimate dehydrogenase [Enterococcus faecium R499]
gi|402933157|gb|EJX52612.1| shikimate dehydrogenase [Enterococcus faecium R496]
gi|402938462|gb|EJX57471.1| shikimate dehydrogenase [Enterococcus faecium R494]
gi|402939866|gb|EJX58747.1| shikimate dehydrogenase [Enterococcus faecium R497]
gi|402945304|gb|EJX63662.1| shikimate dehydrogenase [Enterococcus faecium R446]
gi|402949532|gb|EJX67586.1| shikimate dehydrogenase [Enterococcus faecium P1190]
gi|402949997|gb|EJX68022.1| shikimate dehydrogenase [Enterococcus faecium P1140]
gi|402951232|gb|EJX69181.1| shikimate dehydrogenase [Enterococcus faecium P1986]
gi|402959301|gb|EJX76568.1| shikimate dehydrogenase [Enterococcus faecium P1137]
gi|402963746|gb|EJX80595.1| shikimate dehydrogenase [Enterococcus faecium P1139]
gi|402967447|gb|EJX83999.1| shikimate dehydrogenase [Enterococcus faecium ERV99]
gi|402969940|gb|EJX86316.1| shikimate dehydrogenase [Enterococcus faecium ERV69]
gi|402970247|gb|EJX86605.1| shikimate dehydrogenase [Enterococcus faecium P1123]
gi|402974689|gb|EJX90713.1| shikimate dehydrogenase [Enterococcus faecium ERV38]
gi|402979659|gb|EJX95321.1| shikimate dehydrogenase [Enterococcus faecium ERV26]
gi|402981658|gb|EJX97173.1| shikimate dehydrogenase [Enterococcus faecium ERV168]
gi|402986775|gb|EJY01884.1| shikimate dehydrogenase [Enterococcus faecium ERV165]
gi|402989906|gb|EJY04808.1| shikimate dehydrogenase [Enterococcus faecium ERV161]
gi|402990517|gb|EJY05387.1| shikimate dehydrogenase [Enterococcus faecium ERV102]
gi|402997497|gb|EJY11816.1| shikimate dehydrogenase [Enterococcus faecium ERV1]
gi|402999714|gb|EJY13891.1| shikimate dehydrogenase [Enterococcus faecium E417]
gi|403001557|gb|EJY15603.1| shikimate dehydrogenase [Enterococcus faecium E422]
gi|403007094|gb|EJY20689.1| shikimate dehydrogenase [Enterococcus faecium C621]
gi|403008172|gb|EJY21700.1| shikimate dehydrogenase [Enterococcus faecium C1904]
gi|403010421|gb|EJY23803.1| shikimate dehydrogenase [Enterococcus faecium C497]
gi|403016457|gb|EJY29275.1| shikimate dehydrogenase [Enterococcus faecium 515]
gi|403020368|gb|EJY32910.1| shikimate dehydrogenase [Enterococcus faecium 513]
gi|403021388|gb|EJY33853.1| shikimate dehydrogenase [Enterococcus faecium 514]
gi|403027677|gb|EJY39552.1| shikimate dehydrogenase [Enterococcus faecium 511]
gi|403028708|gb|EJY40517.1| shikimate dehydrogenase [Enterococcus faecium 509]
gi|403029808|gb|EJY41540.1| shikimate dehydrogenase [Enterococcus faecium 510]
gi|403038452|gb|EJY49667.1| shikimate dehydrogenase [Enterococcus faecium 503]
gi|403038554|gb|EJY49765.1| shikimate dehydrogenase [Enterococcus faecium 506]
gi|404452798|gb|EJZ99949.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD4E]
gi|404456367|gb|EKA03090.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD3E]
gi|404461989|gb|EKA07837.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD2E]
gi|404467858|gb|EKA12918.1| shikimate 5-dehydrogenase [Enterococcus sp. GMD1E]
gi|410734109|gb|EKQ76030.1| shikimate dehydrogenase [Enterococcus sp. GMD5E]
gi|425724059|gb|EKU86943.1| shikimate 5-dehydrogenase [Enterococcus durans FB129-CNAB-4]
gi|430446226|gb|ELA55911.1| shikimate 5-dehydrogenase [Enterococcus faecium E0164]
gi|430483135|gb|ELA60234.1| shikimate 5-dehydrogenase [Enterococcus faecium E0333]
gi|430483419|gb|ELA60497.1| shikimate 5-dehydrogenase [Enterococcus faecium E0269]
gi|430496867|gb|ELA72926.1| shikimate 5-dehydrogenase [Enterococcus faecium E1050]
gi|430539050|gb|ELA79312.1| shikimate 5-dehydrogenase [Enterococcus faecium E1133]
gi|430548293|gb|ELA88198.1| shikimate 5-dehydrogenase [Enterococcus faecium E1392]
gi|430549491|gb|ELA89323.1| shikimate 5-dehydrogenase [Enterococcus faecium E1573]
gi|430556408|gb|ELA95916.1| shikimate 5-dehydrogenase [Enterococcus faecium E1576]
gi|430558702|gb|ELA98113.1| shikimate 5-dehydrogenase [Enterococcus faecium E1575]
gi|430560831|gb|ELB00123.1| shikimate 5-dehydrogenase [Enterococcus faecium E1578]
gi|430571896|gb|ELB10770.1| shikimate 5-dehydrogenase [Enterococcus faecium E1620]
gi|430574915|gb|ELB13678.1| shikimate 5-dehydrogenase [Enterococcus faecium E1622]
gi|430577021|gb|ELB15626.1| shikimate 5-dehydrogenase [Enterococcus faecium E1623]
gi|430593687|gb|ELB31669.1| shikimate 5-dehydrogenase [Enterococcus faecium E1731]
gi|430609424|gb|ELB46618.1| shikimate 5-dehydrogenase [Enterococcus faecium E2134]
gi|430613695|gb|ELB50698.1| shikimate 5-dehydrogenase [Enterococcus faecium E2297]
gi|430619232|gb|ELB56060.1| shikimate 5-dehydrogenase [Enterococcus faecium E2883]
gi|430628508|gb|ELB64943.1| shikimate 5-dehydrogenase [Enterococcus faecium E4215]
gi|430634900|gb|ELB71006.1| shikimate 5-dehydrogenase [Enterococcus faecium E1644]
gi|430637123|gb|ELB73161.1| shikimate 5-dehydrogenase [Enterococcus faecium E2369]
gi|430642095|gb|ELB77878.1| shikimate 5-dehydrogenase [Enterococcus faecium E2560]
gi|430643629|gb|ELB79348.1| shikimate 5-dehydrogenase [Enterococcus faecium E4389]
gi|430647496|gb|ELB82942.1| shikimate 5-dehydrogenase [Enterococcus faecium E6045]
gi|430648098|gb|ELB83521.1| shikimate 5-dehydrogenase [Enterococcus faecium E6012]
gi|445188845|gb|AGE30487.1| Shikimate, quinate 5-dehydrogenase I beta [Enterococcus faecium
NRRL B-2354]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + + L GAGGA +A+ A GA +V++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|251780543|ref|ZP_04823463.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084858|gb|EES50748.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 270
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 20/257 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 298
+G++ + + HS P++HN F ++ G Y V+ DLKKF + G +V P
Sbjct: 4 YGVLGEKLSHSISPMIHNKIFSLLDIKGAYKIFEVEREDLKKFADSLRVLKIKGCNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +MK+ DE+ P A+ I A+NTI+ + + KL G+N+D G+ +
Sbjct: 64 YKEDIMKYLDEISPEAKKIRAINTILLK--NNKLYGFNSDY-------------YGFNSI 108
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
+ ++ ++ G GGA +A RG + + +++ SL D + +
Sbjct: 109 LIRKNIEVNDKVAMVLGTGGASKAAVTLLLDRGIKKIYLVSRSKKSISLEEDKRIEYKTY 168
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
+I + KG IL NATP+GM+PN D PV+E+ + ++ ++ D +Y PR+T+ L++ +
Sbjct: 169 NNINDI---KGDILINATPVGMYPNVDFKPVNEKIIDNFDILIDLIYNPRETQFLQNGKI 225
Query: 479 AGAIIVSGVEMFLRQAI 495
+ G+EM + QAI
Sbjct: 226 LNKKVCGGLEMLVGQAI 242
>gi|83814489|ref|YP_446381.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294508318|ref|YP_003572376.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
gi|123528180|sp|Q2S0A0.1|AROE_SALRD RecName: Full=Shikimate dehydrogenase
gi|83755883|gb|ABC43996.1| shikimate 5-dehydrogenase [Salinibacter ruber DSM 13855]
gi|294344646|emb|CBH25424.1| shikimate 5-dehydrogenase [Salinibacter ruber M8]
Length = 285
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 32/290 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
++A T++ L+ PV HS P +HN FR + N YV P+ + L + + F
Sbjct: 3 LDATTQLVTLLGHPVEHSLSPRIHNTAFRAQDVNAAYVATPVRPEALGDAVAGLRALQFL 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAV+ DEV A+A+ AVNTI+R G+L G NTD + +E
Sbjct: 63 GANVTTPHKEAVLPVLDEVTERARAVGAVNTIVR--DGGRLHGDNTDIAGFLRPLE---- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS--RGARVVIFDIDFERAKSLAS 409
ERG G L G ++ GAGGA RA+ +G S R R+ I ++A+ LA+
Sbjct: 117 ERG--------GDALEGAPMLVFGAGGAARAVVYGLLSHYRPERLTIVARRPDQAEGLAA 168
Query: 410 DVM-----GAAR--PFEDI-LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 458
D+ GA R FE+ L+ + + ++ NATPLGM P+ R D+
Sbjct: 169 DLAAHDPDGALRVSSFEEAALSVRTSR--LVVNATPLGMAPDR-RGQTPWPNPVDFTADH 225
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 508
+V+D VYTP +TRLL++A A GA + G++M + QA + +T + P+
Sbjct: 226 VVYDLVYTPEETRLLREAAAEGATPIGGLDMLVEQAAAAYRQWTDRGMPQ 275
>gi|293553506|ref|ZP_06674134.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430833289|ref|ZP_19451302.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430835984|ref|ZP_19453969.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|431295209|ref|ZP_19507097.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|431767006|ref|ZP_19555466.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
gi|291602383|gb|EFF32607.1| shikimate 5-dehydrogenase [Enterococcus faecium E1039]
gi|430486744|gb|ELA63580.1| shikimate 5-dehydrogenase [Enterococcus faecium E0679]
gi|430488824|gb|ELA65472.1| shikimate 5-dehydrogenase [Enterococcus faecium E0680]
gi|430581299|gb|ELB19744.1| shikimate 5-dehydrogenase [Enterococcus faecium E1626]
gi|430631879|gb|ELB68179.1| shikimate 5-dehydrogenase [Enterococcus faecium E1321]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + + L GAGGA +A+ A GA +V++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|418963256|ref|ZP_13515095.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383343371|gb|EID21555.1| shikimate dehydrogenase [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRCYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+ V+ F DEV P AQ I AVNT++ + GKLIGYNTD
Sbjct: 63 GINLSMPYKQVVIPFLDEVTPAAQMIGAVNTVVNQ--HGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ V+ GAGGA A+ A G + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMVMLGAGGAATAIIVQAALDGTEEIFVFTRQSSFERVSQKM 165
Query: 409 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
++ P E ++L + A+L N T LGM +P S L LV
Sbjct: 166 KEIQQKTATKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIP-SSIRLPHSLLV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A+ +V+G+ M L QA F L+TGK+ P + + + + K+
Sbjct: 225 ADVIYQPFETPFLKWAKGQEVEVVNGLGMLLYQAAEAFKLWTGKKMPTKEIWQALEKKY 283
>gi|430822290|ref|ZP_19440869.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430864786|ref|ZP_19480611.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|431743724|ref|ZP_19532600.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
gi|430443348|gb|ELA53333.1| shikimate 5-dehydrogenase [Enterococcus faecium E0120]
gi|430553567|gb|ELA93253.1| shikimate 5-dehydrogenase [Enterococcus faecium E1574]
gi|430606513|gb|ELB43864.1| shikimate 5-dehydrogenase [Enterococcus faecium E2071]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHEDL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|383318782|ref|YP_005379623.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
gi|379320152|gb|AFC99104.1| shikimate 5-dehydrogenase [Methanocella conradii HZ254]
Length = 268
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 137/277 (49%), Gaps = 25/277 (9%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 297
++G+I P+ HS P +HN F+ + + Y V L + + + F G +V
Sbjct: 4 MYGVIGDPIAHSLSPAMHNAAFKALGMDCYYGAFHVKGRYLHEAVNGARALGFGGLNVTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+KEAV++F E A+ I A NTI R + YNTD +I ++ED+
Sbjct: 64 PHKEAVIRFV-EADAAAREIGAANTIDFRTNKA----YNTDAPGAIASLEDS-------- 110
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
G + GR ++ GAGGA RA+ +G GA V I + ++A LA+ +
Sbjct: 111 -----GVKVKGRSVLVLGAGGAARAVTYGLLKAGATVTIANRTAQKAADLAAYMREYGEV 165
Query: 418 FEDILNFQPEK---GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
F ++ EK I+ N T +GM D V+ + L D Q VFD VY P +TRLLK
Sbjct: 166 FGTGMDNLREKVSISDIIVNTTTVGM--GQDETLVTADMLSDRQTVFDLVYRPVETRLLK 223
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
+A AGA + G+ M +RQ F ++TG + P + M
Sbjct: 224 EARLAGARAIDGITMLVRQGALSFEIWTGVKPPIDVM 260
>gi|422806705|ref|ZP_16855136.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
gi|324112516|gb|EGC06493.1| shikimate 5-dehydrogenase [Escherichia fergusonii B253]
Length = 287
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD+ LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
+ G+ + GAGGA A+ A G + + IF D F A+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 406 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + F+ D L + + +L NAT +GM P ++ + + + LR
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDSSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE +G ++G+ M L Q F ++TGKE P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTINGLGMMLWQGAAAFEIWTGKEMPVDYIKSILF 287
>gi|152968656|ref|YP_001333765.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|262044888|ref|ZP_06017930.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012030|ref|ZP_08307247.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|365142635|ref|ZP_09347751.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|378976949|ref|YP_005225090.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386033134|ref|YP_005953047.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|419973485|ref|ZP_14488909.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980108|ref|ZP_14495395.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985021|ref|ZP_14500164.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419990105|ref|ZP_14505078.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995985|ref|ZP_14510789.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003092|ref|ZP_14517740.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007859|ref|ZP_14522351.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013830|ref|ZP_14528139.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420019141|ref|ZP_14533335.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024633|ref|ZP_14538645.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031626|ref|ZP_14545446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420037930|ref|ZP_14551581.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042184|ref|ZP_14555678.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420048366|ref|ZP_14561680.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053592|ref|ZP_14566769.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420059464|ref|ZP_14572471.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420065185|ref|ZP_14577992.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073114|ref|ZP_14585744.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420075986|ref|ZP_14588460.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084181|ref|ZP_14596446.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909952|ref|ZP_16339747.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421919298|ref|ZP_16348801.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424828935|ref|ZP_18253663.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078403|ref|ZP_18481506.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425079840|ref|ZP_18482937.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425089035|ref|ZP_18492128.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425089958|ref|ZP_18493043.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428151081|ref|ZP_18998826.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428931502|ref|ZP_19005097.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|428938468|ref|ZP_19011595.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|449051289|ref|ZP_21731888.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
gi|150953505|gb|ABR75535.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|259037615|gb|EEW38844.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534019|gb|EGF60671.1| shikimate dehydrogenase [Klebsiella sp. MS 92-3]
gi|339760262|gb|AEJ96482.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae KCTC 2242]
gi|363651417|gb|EHL90485.1| shikimate dehydrogenase [Klebsiella sp. 4_1_44FAA]
gi|364516360|gb|AEW59488.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397347024|gb|EJJ40134.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397348124|gb|EJJ41226.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397353005|gb|EJJ46082.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366106|gb|EJJ58725.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397367720|gb|EJJ60329.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397370399|gb|EJJ62982.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397379152|gb|EJJ71350.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397383945|gb|EJJ76072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389307|gb|EJJ81249.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398570|gb|EJJ90232.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397399773|gb|EJJ91423.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404887|gb|EJJ96373.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397415554|gb|EJK06739.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397416833|gb|EJK08003.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397423820|gb|EJK14737.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397432272|gb|EJK22936.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397435462|gb|EJK26077.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438255|gb|EJK28767.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447948|gb|EJK38133.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450431|gb|EJK40536.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405590264|gb|EKB63798.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405600173|gb|EKB73340.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405606765|gb|EKB79735.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405614522|gb|EKB87221.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410116082|emb|CCM82372.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410118329|emb|CCM91426.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|414706351|emb|CCN28055.1| putative shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305696|gb|EKV67813.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae VA360]
gi|426308001|gb|EKV70072.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae JHCK1]
gi|427538900|emb|CCM94964.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448876277|gb|EMB11271.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae hvKP1]
Length = 287
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 406 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + F+ D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 ETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSILF 287
>gi|312143784|ref|YP_003995230.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
gi|311904435|gb|ADQ14876.1| shikimate 5-dehydrogenase [Halanaerobium hydrogeniformans]
Length = 297
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 40/292 (13%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFA 291
N +TK++GL+ K + HS P LHN FR ++ N IY+ + + L+ + + + +F
Sbjct: 7 NNETKLYGLLGKTLSHSISPSLHNTGFRDLDINAIYLMLECKEKELLEDYIQSLKNLNFG 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G++V PYKE ++ + + LA+ AVNT++ R G+L GYNTD IE+A
Sbjct: 67 GWNVTIPYKEDIIPYLNGFSSLARDAGAVNTVLNR--RGRLTGYNTDVIGFQRQIEEA-- 122
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLAS- 409
G + + V+ GAGGA RA +A + A V I + E A L
Sbjct: 123 -----------GFVVKDKKAVVIGAGGAARAVIAALIQLNLAEVTIINRTLENAAELVEL 171
Query: 410 ------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNT--DRVPVSEETLR 455
+ + EDI N ++ N TP+GM+ N ++ ++ E +
Sbjct: 172 FKEKESKTEFSYAALKESEYKEDIKN-----ADLIINTTPIGMYSNKMEKKLVINPEYIN 226
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
+ Q V D +Y P KT LLK+AE GA I +G+ + QA F L+T KE P
Sbjct: 227 ENQFVLDLIYNPLKTELLKEAEKKGAQIGNGLPTLIYQAEAAFKLWT-KEMP 277
>gi|167043755|gb|ABZ08447.1| putative Shikimate / quinate 5-dehydrogenase [uncultured marine
crenarchaeote HF4000_APKG3B16]
Length = 273
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 32/290 (11%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
+ + +I P+ HS P +HN FRH+ + Y+ + +L + AGF+V
Sbjct: 2 SNTYAVIGDPIDHSLSPNIHNAAFRHLKLDHTYIAYKIPAGELSAGIEALKAIKIAGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K +MKF DE+ + I AVNT++ DGKL GYNTD + D IK++
Sbjct: 62 TIPHKIEMMKFLDEMDTTCKIIGAVNTVLNE--DGKLKGYNTD----MIGFLDPIKKKNL 115
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLA---SDV 411
+ +L GAGGA RA+ K + +++ I + E A LA +
Sbjct: 116 ---------TIKDSQVLLLGAGGAARAIVTAMVKEKASKITIVNRTMENANKLAEFAKKI 166
Query: 412 MGAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
G A D ++ Q I + N+T +GM + P+S E + +V+D VY
Sbjct: 167 GGNA----DTVSIQEANKLIADYKFIINSTSIGMR--NEPSPISTENISKDSIVYDIVYQ 220
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
P T L+K ++ GA I+ G EM L QA F ++ EAP + M++++L
Sbjct: 221 PINTDLIKKSKENGATIIYGYEMLLSQAACSFEIWHKMEAPYDVMKKMLL 270
>gi|430837903|ref|ZP_19455853.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430858336|ref|ZP_19475964.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|431369954|ref|ZP_19509653.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
gi|430492183|gb|ELA68597.1| shikimate 5-dehydrogenase [Enterococcus faecium E0688]
gi|430545545|gb|ELA85518.1| shikimate 5-dehydrogenase [Enterococcus faecium E1552]
gi|430583701|gb|ELB22059.1| shikimate 5-dehydrogenase [Enterococcus faecium E1627]
Length = 284
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESVRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|187932786|ref|YP_001887325.1| shikimate 5-dehydrogenase [Clostridium botulinum B str. Eklund 17B]
gi|187720939|gb|ACD22160.1| shikimate dehydrogenase [Clostridium botulinum B str. Eklund 17B]
Length = 270
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 20/257 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 298
+G++ + + HS P++HN F ++ G Y V+ DLKKF + G +V P
Sbjct: 4 YGVLGEKLSHSISPMIHNKIFSLLDIKGAYKIFEVEKEDLKKFADSLRVLKIKGCNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +MK+ DE+ P A+ I A+NTI+ + + KL G+N+D G+ +
Sbjct: 64 YKEDIMKYLDEISPEAKKIKAINTILLK--NNKLYGFNSDY-------------YGFNSI 108
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
++ ++ G GGA +A +G + + +++ L D R +
Sbjct: 109 LLRNNIEANDKVAMVLGTGGASKAAVTLLLDKGVKKIYLVSRSKKSIPLDLDNRIEYRIY 168
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
EDI N KG IL NATP+GM+PN D PV E+ + ++ ++ D +Y PR T+ L+ +
Sbjct: 169 EDIGNV---KGDILINATPVGMYPNVDNNPVDEKIINNFDVLIDLIYNPRDTKFLQCGKK 225
Query: 479 AGAIIVSGVEMFLRQAI 495
I G+EM + QAI
Sbjct: 226 LNKKICGGLEMLVGQAI 242
>gi|227551431|ref|ZP_03981480.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257895956|ref|ZP_05675609.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
gi|227179440|gb|EEI60412.1| shikimate dehydrogenase [Enterococcus faecium TX1330]
gi|257832521|gb|EEV58942.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium Com12]
Length = 284
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA+ ++ + F + K
Sbjct: 118 -----------GISVKKKKVTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM D+ P+ + + +L
Sbjct: 167 FEQLSYRTSCEIKVRDFADTYQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHEKL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y P +TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPSETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|188589771|ref|YP_001922266.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
gi|188500052|gb|ACD53188.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
Length = 270
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 20/257 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 298
+G++ + + HS P++HN F ++ G Y V+ DLKKF + G +V P
Sbjct: 4 YGVLGEKLSHSISPMIHNKIFSLLDIKGAYKIFEVEREDLKKFADSLRVLKIKGCNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +MK+ DE+ P A+ I A+NTI+ + + KL G+N+D G+ +
Sbjct: 64 YKEDIMKYLDEISPEAKKIRAINTILLK--NNKLYGFNSDY-------------YGFNSI 108
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
+ ++ ++ G GGA +A RG + + +++ SL D + +
Sbjct: 109 LIRNNIEVNDKVAMVLGTGGASKAAVTLLLDRGIKKIYLVSRSKKSISLDEDKRIEYKTY 168
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
+I + KG IL NATP+GM+PN D PV+E+ + ++ ++ D +Y PR+T+ L++ +
Sbjct: 169 NNINDI---KGDILINATPVGMYPNVDFKPVNEKIIDNFDILIDLIYNPRETQFLQNGKI 225
Query: 479 AGAIIVSGVEMFLRQAI 495
+ G+EM + QAI
Sbjct: 226 LNKKVCGGLEMLVGQAI 242
>gi|147837951|emb|CAN60562.1| hypothetical protein VITISV_034025 [Vitis vinifera]
Length = 124
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 78/102 (76%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67
+N+T+IC P+MA SV+Q+L + +AK G D+VEIRLD + NF P +DL+ ++ + PLP
Sbjct: 21 RNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPT 80
Query: 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVA 109
L+ YRP W GG Y+GDE KRL+AL LA +LGADY+D EL+V+
Sbjct: 81 LVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVS 122
>gi|298490426|ref|YP_003720603.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
gi|298232344|gb|ADI63480.1| shikimate 5-dehydrogenase ['Nostoc azollae' 0708]
Length = 298
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 29/296 (9%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I TK+ G+I PV HS P++HN + + +Y+P + ++L+ + +++
Sbjct: 10 QQITGKTKLLGVIGHPVEHSLSPVMHNAALTKLGLDYVYLPFPIAPENLEIAIAGFAAIG 69
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G SV P+K+A++ E+ P+AQAI AVNT+ + K +G NTD E I ++
Sbjct: 70 VVGLSVTIPHKQAIIPILTEISPIAQAIGAVNTVTHQ--GNKWVGTNTDVEGFIAPLQ-- 125
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLA 408
++ + + V+ G GGA RA+ G G A + + + + K
Sbjct: 126 ----------TTYQQDWSHKRAVILGNGGAARAIVAGCVQLGLAEIHLVGRNMYKLKEFR 175
Query: 409 SDVMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 458
+ +E++ P +L N TP+GM+P D P+S E + +
Sbjct: 176 HSWQYSPYVDKFQVHAWEELPKLIPLAN-LLVNTTPIGMYPQVDESPLSAEDMANLPSGA 234
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
+ +D +Y P+ T+ LK AE GAI + G+EM ++Q ++ +E P MR+
Sbjct: 235 IAYDLIYIPKPTKFLKLAETQGAIAIDGLEMLVQQGAAALKIWLQQETVPVAEMRQ 290
>gi|145577929|gb|ABP82683.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
pulsiensis]
Length = 238
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 129/250 (51%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L GAGGA RA+ F G + + + + ++AK L + V A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATK 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP + P+ +L++ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPRVEHTPLQISSLKNGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|335029401|ref|ZP_08522908.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
gi|334268698|gb|EGL87130.1| shikimate dehydrogenase [Streptococcus infantis SK1076]
Length = 284
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 148/308 (48%), Gaps = 49/308 (15%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNRAFEATNTNGVYLAWEVEGTDLAETVANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+G+ SF ++G+ VL GAGGA +A+ A G ++V +F + S
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILVQAILDGVSQVSVF---------VRSA 156
Query: 411 VMGAARPF-----------------EDILNFQP--EKGAILANATPLGMHPNTDRVPVSE 451
MG +P+ ED Q K +L NAT +GM + +P S
Sbjct: 157 SMGKTQPYLEKLQHETGFRVDLFALEDAQELQENIRKAELLVNATSVGMDGASQPIPTSI 216
Query: 452 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
L + LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P + +
Sbjct: 217 -VLPEKLLVADVIYQPFETPFLKWARSQGNHAVNGLGMLLYQAAEAFQLWTGKEMPTDQI 275
Query: 512 REIVLAKF 519
E++ K+
Sbjct: 276 WELLKQKY 283
>gi|110729183|gb|ABG88186.1| CPC-1 [Cucumis sativus]
Length = 130
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 252 KGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311
K P L+N F+ V + IYVP+ VDD KF TYSS D GFSV P+KEAV K+CDEV
Sbjct: 1 KLPALYNELFKLVGLDAIYVPLLVDDPTKFLDTYSSSDIGGFSVTIPHKEAVFKYCDEVD 60
Query: 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
P+A+A AVN ++RR SDGKL GYNTDC +I+AIED + G N + + S LAG++
Sbjct: 61 PVAKATGAVNFVLRRQSDGKLCGYNTDCYGAISAIEDGL--LGLHNDSFAVSSRLAGKL 117
>gi|424814987|ref|ZP_18240138.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
gi|325496007|gb|EGC93866.1| shikimate 5-dehydrogenase [Escherichia fergusonii ECD227]
Length = 287
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD+ LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
+ G+ + GAGGA A+ A G + + IF D F A+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 406 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + F+ D L + + +L NAT +GM P ++ + + + LR
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDCSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE +G V+G+ M L Q F ++TGKE P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTVNGLGMMLWQGAAAFEIWTGKEMPVDYIKSILF 287
>gi|336437054|ref|ZP_08616763.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006188|gb|EGN36224.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 288
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GL+ PV HS P++HN F+ + + Y+ V D L+ +
Sbjct: 3 ERITGKTRLTGLLGSPVTHSISPMMHNEAFKELGLDYAYLAFDVGTDKLEAAVEGLKVLN 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + CD + P A+ I AVNT++ DG L GY TD + +++DA
Sbjct: 63 VRGFNVTMPDKNLMCSLCDHLSPAAEIIGAVNTVVN--EDGVLTGYTTDGIGYMMSVKDA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAK 405
G + G+ + GAGGAG ++ A G A + +F+ FERA+
Sbjct: 121 -------------GYDVIGKKMTIFGAGGAGTSILVQAALDGVAEITVFNRRTPFFERAE 167
Query: 406 S----LASDVMGAARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
L R + E IL + + A+L NAT LGM PN + + + + L
Sbjct: 168 RIIGRLKEQTGCRIRLYDYDDESILRREIGESALLTNATSLGMAPNVETCILKDASMLHP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+V D +Y P++TRLL+ AG +G+ M L Q F ++TG++ P E ++E
Sbjct: 228 GVVVSDMIYNPKETRLLRMVREAGCRTFNGMYMLLYQGAEAFRIWTGQQMPVEHIKE 284
>gi|294618196|ref|ZP_06697782.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|431499460|ref|ZP_19515039.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|431618722|ref|ZP_19522767.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
gi|291595544|gb|EFF26851.1| shikimate 5-dehydrogenase [Enterococcus faecium E1679]
gi|430588096|gb|ELB26301.1| shikimate 5-dehydrogenase [Enterococcus faecium E1634]
gi|430603872|gb|ELB41383.1| shikimate 5-dehydrogenase [Enterococcus faecium E1904]
Length = 284
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + + L GAGGA +A+ A GA +V++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELLTKEKMP 275
>gi|339010605|ref|ZP_08643175.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
gi|338772760|gb|EGP32293.1| shikimate dehydrogenase [Brevibacillus laterosporus LMG 15441]
Length = 277
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 24/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 297
+ GL +PVGHS P++HN F Y V+D +K+ + G +V
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K AV+ + D++ PLA+ I AVNTI+ DG LIGYNTD + ++ ++E G
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIVNE--DGTLIGYNTDGTGYVRSL---LEETGID- 114
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAAR 416
L + L GAGGA RA+A RG + + I + ERA+ LA +G+
Sbjct: 115 --------LTEQTVTLLGAGGAARAVACTLVERGVKEIRIVNRSLERAELLAM-ALGSQI 165
Query: 417 PFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
P + +F + AI L N T +GM+P+ +PV + LR +V D +Y P +T+
Sbjct: 166 PIR-VYSFAQAELAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQ 224
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL+ A+ GA SG+ MF+ Q + L+TG+ AP + MREIVL
Sbjct: 225 LLQCAKEIGATHHSGLGMFINQGALAYELWTGEAAPTDKMREIVLQHL 272
>gi|383774973|ref|YP_005454042.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. S23321]
gi|381363100|dbj|BAL79930.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. S23321]
Length = 302
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 139/291 (47%), Gaps = 48/291 (16%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIY------------VPMFVDDLKKFFSTYSSPD 289
GLI P+ HS P +H + Y + M ++ +++
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRCHYQLIEVAGADAAGLAMMLEGVRRL-------G 67
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
FAG +V FPYKEAV+ D + P A A+ AVNT++ + DG+L G+NTD
Sbjct: 68 FAGVNVTFPYKEAVVPLLDALAPRAAAMGAVNTVVVK--DGRLTGHNTDTT--------- 116
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLA 408
G+ A +P +G + GAGG G+A+AF S + IFD + RA +L
Sbjct: 117 ----GFARAVAPLLAP-SGNAVAVIGAGGVGKAIAFALASLDVTDIRIFDSELARAATLV 171
Query: 409 SDVM--GAAR---PFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
S + G AR ED L+ GA L N TP+GM PN D PV+ L D V D
Sbjct: 172 SLLAPRGGARVAASVEDALH-----GATGLVNGTPVGMLPNRD-TPVAVTLLHDKLWVTD 225
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
AVY+P T LL A+ GA I++G E+ + QA F LFTG E M E
Sbjct: 226 AVYSPLITPLLAAAQERGARIMTGRELAIYQAADAFELFTGLAPSTEIMGE 276
>gi|428301034|ref|YP_007139340.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
gi|428237578|gb|AFZ03368.1| shikimate dehydrogenase [Calothrix sp. PCC 6303]
Length = 306
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 144/301 (47%), Gaps = 32/301 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+I PVGHS P++HN + + +Y+P + +L+ + +++
Sbjct: 15 ITGTTKLLGVIGDPVGHSLSPLMHNAAINTLGLDYVYLPFPIKPHNLRDAIACFAAIGVL 74
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GFSV P+K+A++ F EV LA+ + AVNT+ + D +G NTD I+ ++
Sbjct: 75 GFSVTIPHKQAIIPFLSEVSDLAKVVGAVNTVFYQ--DHHWVGTNTDVTGFISPLK---- 128
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDID----FERA 404
++ + V+ G GGA RA+ G G VV D++ F +
Sbjct: 129 --------TTYNRDWSQTSVVILGNGGAARAIVVGCTELGCGEIHVVGRDVEKIALFRDS 180
Query: 405 KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ------ 458
++ V D+L + +L N TP+GMHP +R P++ E + +
Sbjct: 181 WQNSTLVGNLQVHHWDMLPKLLPQANLLVNTTPVGMHPQIERSPLTIEEFKQFAVASSIN 240
Query: 459 --LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMREIV 515
+ +D Y P T+ L+ A + GA ++G+EM ++Q ++ ++ P + MR+ +
Sbjct: 241 PPIAYDLTYNPSPTKFLQQAASVGATTINGLEMLVQQGAAALKIWLQRDTVPVDVMRQTL 300
Query: 516 L 516
L
Sbjct: 301 L 301
>gi|21227376|ref|NP_633298.1| shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452209858|ref|YP_007489972.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
gi|24211496|sp|Q8PXE6.1|AROE_METMA RecName: Full=Shikimate dehydrogenase
gi|20905736|gb|AAM30970.1| Shikimate 5-dehydrogenase [Methanosarcina mazei Go1]
gi|452099760|gb|AGF96700.1| Shikimate 5-dehydrogenase I alpha [Methanosarcina mazei Tuc01]
Length = 280
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+VFG+ PVGHS P +HN F + + IY V + L+K + F G ++
Sbjct: 3 QVFGVFGDPVGHSLSPAMHNAAFSALGMDCIYHAFRVTPEKLEKAILGAEAMGFGGINLT 62
Query: 297 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED-AIKER 353
P KE +K D V P LA+ I AVNT++ G + GYNTD + A+ D ++ R
Sbjct: 63 VPLKEKALKL-DFVKPDPLAKRIGAVNTLVF-GKKGDIQGYNTDGPGAKQALLDTGVEIR 120
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMG 413
G + A G F LA + GA + + + ERA LA ++
Sbjct: 121 GSRMVVAGAGGAARAVAFQLA--------------ADGADITVINRTEERAVGLAREISA 166
Query: 414 AARP----------FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
A P +++L +L N T LGMHPNTD V+ E L VFD
Sbjct: 167 ADLPGKIRGTGLSGLKELL----RDADVLINTTTLGMHPNTDATIVTAEELHSGLTVFDI 222
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VY P +TRLL++A +GA +SGV M + Q F L+TG E P E M++ VL
Sbjct: 223 VYNPLETRLLREARTSGAKTISGVLMLVYQGAEAFRLWTGVEPPLELMKKTVL 275
>gi|425058431|ref|ZP_18461812.1| shikimate dehydrogenase [Enterococcus faecium 504]
gi|403038372|gb|EJY49588.1| shikimate dehydrogenase [Enterococcus faecium 504]
Length = 284
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVAYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|431071468|ref|ZP_19494439.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|431104340|ref|ZP_19497064.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|431582328|ref|ZP_19520277.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|431740200|ref|ZP_19529117.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
gi|430567101|gb|ELB06187.1| shikimate 5-dehydrogenase [Enterococcus faecium E1604]
gi|430569928|gb|ELB08907.1| shikimate 5-dehydrogenase [Enterococcus faecium E1613]
gi|430594218|gb|ELB32188.1| shikimate 5-dehydrogenase [Enterococcus faecium E1861]
gi|430603736|gb|ELB41249.1| shikimate 5-dehydrogenase [Enterococcus faecium E2039]
Length = 284
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + + L GAGGA +A+ A GA+ +V++ + F + K
Sbjct: 118 -----------GISVKKKKMTLLGAGGAAKAVTVQAALDGAKEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM D+ P+ + + L
Sbjct: 167 FEQLSYRTSCKVKVRDFADTDQLRKDLKESCLLVNATDIGMGKKIDQSPLLDINMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+ ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWAKEKMP 275
>gi|145577939|gb|ABP82688.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
finitimus]
Length = 238
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A+ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALRSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + + + ++AK L + M L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACMATVHSVALSLEKATE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
+ I+ T +GMHP + P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|407473822|ref|YP_006788222.1| shikimate 5-dehydrogenase [Clostridium acidurici 9a]
gi|407050330|gb|AFS78375.1| shikimate 5-dehydrogenase AroE [Clostridium acidurici 9a]
Length = 282
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+A+T ++ LI P+ S P +HN +F+ N Y+ + V +DL+ +
Sbjct: 3 IDANTNLYCLIGHPISKSLSPEIHNYSFKKNGINAKYIALDVSTEDLEDAVKGIKALGIR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K ++K+ DE+ A+ + AVNT+ + +GKLIGYNTD + ++D
Sbjct: 63 GCNVTIPHKIDIIKYLDEIDEEAELLGAVNTV--KNENGKLIGYNTDGRGFVQVLKDKNI 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS- 409
E KN + GAGGA RA++ G ++ IF+ E+AK +
Sbjct: 121 EIKNKN-------------IAVLGAGGAARAISIILAKEGINQITIFNRTIEKAKIIIDE 167
Query: 410 ------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
DV G E + IL N T +GM+PN D +PV ++ D
Sbjct: 168 IKEKFPDVTGMYSSLES-NKYDLSSVDILINCTSIGMYPNIDEMPVDPSIFPRQTVICDI 226
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
VY P KT+LL+ +E G I + G++M + Q I ++ K K+ + E + K
Sbjct: 227 VYKPLKTKLLEMSEKNGNIAIGGLDMLIYQGILSEEIWLQKNIDKDLVIEWIKEKI 282
>gi|78043133|ref|YP_359479.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123576787|sp|Q3AEF5.1|AROE_CARHZ RecName: Full=Shikimate dehydrogenase
gi|77995248|gb|ABB14147.1| shikimate 5-dehydrogenase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 280
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 28/292 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN +TK+ G+I P+ H+ P +HN F+ +N N +Y+P+ V + L + + +F
Sbjct: 3 INGETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNFR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKE V F DEV A+ I AVNTI+ G+LIGYNTD + ++++
Sbjct: 63 GINVTIPYKEKVFPFLDEVATEAKTIGAVNTIVH--DRGRLIGYNTDAPGFLLSLKENDV 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E + G+ +L GAGGA RA+A+ + GA ++I + ++AK LA D
Sbjct: 121 E-------------VTGKKVLLLGAGGAARAVAYALLTAGAELIIANRTIDKAKELAKDF 167
Query: 412 MGAARPFEDI------LNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVFDA 463
G + E + ++ P A+ N PLGMHP +++P + T D+ + +D
Sbjct: 168 QGVGKISEILELGDKPISLAPYHMAV--NTLPLGMHPYENQMPAVDFTGVTSDF-VAYDL 224
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+Y P +T+ LK ++ GA ++G+ M L Q + F +TG P + M++ +
Sbjct: 225 IYNPAETKFLKASKEKGARTINGLSMLLWQGVLAFEKWTGVSPPVKVMKKAI 276
>gi|291616254|ref|YP_003518996.1| AroE [Pantoea ananatis LMG 20103]
gi|378768567|ref|YP_005197040.1| shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
gi|386014647|ref|YP_005932924.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|291151284|gb|ADD75868.1| AroE [Pantoea ananatis LMG 20103]
gi|327392706|dbj|BAK10128.1| shikimater dehydrogenase AroE [Pantoea ananatis AJ13355]
gi|365188053|emb|CCF11003.1| Shikimate 5-dehydrogenase [Pantoea ananatis LMG 5342]
Length = 287
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +L+K + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V ++ D++ P AQ + AVNT++ +G L G+ TD
Sbjct: 63 LRGCNVSMPNKTEVCRYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITD----------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 409
GY A G + G+ + GAGGA A+ A G + + ++ + A
Sbjct: 110 --GTGYMRALAEEGIDILGKKMTILGAGGAATAICVQAALDGVKAISVFNQRDKFFANAQ 167
Query: 410 DVMGAARPFEDI------------LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + R D L + IL NAT +GM P ++ + +E+ LR
Sbjct: 168 ETVAKIRAHTDCEIHLFDLDDHDRLRAEINDSVILTNATGVGMKPFEGQMLLPDESFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G I++G+ M L Q F ++TGK P + ++ I+
Sbjct: 228 ELIVSDVVYIPRKTHLLETAEKKGCRIINGLGMMLWQGASAFEIWTGKPMPVDHIKNILF 287
>gi|225620102|ref|YP_002721359.1| shikimate 5-dehydrogenase [Brachyspira hyodysenteriae WA1]
gi|225214921|gb|ACN83655.1| shikimate 5-dehydrogenase [Brachyspira hyodysenteriae WA1]
Length = 283
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 35/299 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
INA+T + GL + P HS PI+HN F +N N Y+ VD +LK+ ++ + +
Sbjct: 3 INAETILTGLFASPSKHSISPIMHNEAFNKLNLNYTYLAFEVDKNNLKEAVNSIKTLNMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-- 349
G ++ P K+ V+K+ D++ A+ +VNTI+ +G LIGY+TD E I ++E+
Sbjct: 63 GVNLSMPNKKEVIKYLDKISEAAELSQSVNTIVN--DNGILIGYSTDGEGFIKSLEEENV 120
Query: 350 -IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK 405
IK++ + G GGA A+ A G + + +F D ++ K
Sbjct: 121 FIKDKN----------------ITILGTGGASIAIISQAALYGVKEIYVFKRDTNWNEQK 164
Query: 406 SLASDVMGAA------RPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
+ ++ ED IL + E +L NAT +GM + + + R+
Sbjct: 165 KIIDNIASKTNCNITLHSLEDKNILKSKIENSYVLINATSVGMKEDVSLIE-DKSFFRND 223
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D +Y P KT+LLK AE G I++G+ M L Q F L+T K+ P E+++ I+
Sbjct: 224 LVVSDCIYHPAKTKLLKIAEEEGCKIINGMGMLLYQGALAFELWTNKKMPVEYIKNIIF 282
>gi|228478338|ref|ZP_04062946.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
gi|228250017|gb|EEK09287.1| shikimate 5-dehydrogenase [Streptococcus salivarius SK126]
Length = 285
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 407
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 459
++ A D FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCHLEFHALNDFEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|16332159|ref|NP_442887.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|383323902|ref|YP_005384756.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383327071|ref|YP_005387925.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383492955|ref|YP_005410632.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384438223|ref|YP_005652948.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|451816311|ref|YP_007452763.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|9087124|sp|P74591.1|AROE_SYNY3 RecName: Full=Shikimate dehydrogenase
gi|1653788|dbj|BAA18699.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|339275256|dbj|BAK51743.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
gi|359273222|dbj|BAL30741.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276392|dbj|BAL33910.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359279562|dbj|BAL37079.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407960196|dbj|BAM53436.1| shikimate 5-dehydrogenase [Bacillus subtilis BEST7613]
gi|451782280|gb|AGF53249.1| shikimate 5-dehydrogenase [Synechocystis sp. PCC 6803]
Length = 290
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 31/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK+ G+I PVGHS P++HN + + + YV P+ +DL + +
Sbjct: 4 ITGKTKLLGVIGYPVGHSLSPVMHNAALQAMASDYAYVAFPIAPEDLTIAIAGLGASGVQ 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK-LIGYNTDCEASITAIEDAI 350
G SV P+K+ VM ++ A+ + AVNT+ R DG G NTD E
Sbjct: 64 GLSVTIPHKQVVMPLLTQITETARQVGAVNTLWR---DGHGWQGTNTDVE---------- 110
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
G+ +GR V+ G GGA RA+ G G +++ E+ A+
Sbjct: 111 ---GFLAPLLELKQDWSGRTAVILGYGGAARAVVVGLTQLGCPEIIVVGRSQEKLAQFAN 167
Query: 410 DVMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 459
P+E + P K ++L N+TP+GM P+ + P+ + E L +
Sbjct: 168 SWTDPKIKQALQVLPWEALSTVIP-KASLLINSTPVGMAPHPKQSPLDQSLVEKLPPTAI 226
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+D +YTPR TR L+ A+ G + + G EM ++Q ++ +E P + MR+ +L
Sbjct: 227 AYDLIYTPRPTRFLQHAQERGLVTIDGAEMLVQQGAAALKIWLQQEVPVDVMRQALL 283
>gi|386052745|ref|YP_005970303.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
gi|346645396|gb|AEO38021.1| shikimate 5-dehydrogenase [Listeria monocytogenes Finland 1998]
Length = 291
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 -ERAKSLASDVMGAARPFE----DILNFQPEKGAILANATPLGMHP-NTDRVPVSEETLR 455
+ + + S A+ F+ D L + + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINSKTDCKAQLFDIEDHDQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 516 L 516
Sbjct: 291 F 291
>gi|311069169|ref|YP_003974092.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|419820181|ref|ZP_14343794.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
gi|310869686|gb|ADP33161.1| shikimate 5-dehydrogenase [Bacillus atrophaeus 1942]
gi|388475693|gb|EIM12403.1| shikimate 5-dehydrogenase [Bacillus atrophaeus C89]
Length = 280
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 28/291 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P +HN + + +G Y V D+LK + G +V
Sbjct: 3 QLYGVIGNPIGHSMSPDIHNAALKDLGLDGHYHAFQVENDNLKDAVKGIKALGMIGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M+ D + A+ + AVNT+ R L+GYNTD E + ++ + +
Sbjct: 63 VPHKVAIMEHLDHIDESAKVLGAVNTV--RTEGDMLVGYNTDGEGFVKSLRKILDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
P+ ++ GAGGA RA+ + R I + E+A+ L + ++
Sbjct: 117 --------PVQDLSILMIGAGGAARAIFTTIVRENPKRFDICNRTLEKAEQL----IQSS 164
Query: 416 RPFED--ILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
F++ +L + E+ ++ + T +GM+P+ D VP+S + + +V D VY P
Sbjct: 165 PSFQNKQVLTIKEAEENLERYDVIIHTTSIGMYPDIDAVPISLQRAANRAIVCDIVYNPI 224
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+T LLK AE G + GV MF+ QA F L+TG+E + MR IV AK
Sbjct: 225 RTALLKQAEQKGLRTLDGVGMFVEQAALSFQLWTGQEPDIDKMRAIVEAKL 275
>gi|294616615|ref|ZP_06696391.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430849862|ref|ZP_19467629.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
gi|291590565|gb|EFF22298.1| shikimate 5-dehydrogenase [Enterococcus faecium E1636]
gi|430536557|gb|ELA76924.1| shikimate 5-dehydrogenase [Enterococcus faecium E1185]
Length = 284
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + ++ NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLIVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|218547527|ref|YP_002381318.1| shikimate 5-dehydrogenase [Escherichia fergusonii ATCC 35469]
gi|218355068|emb|CAQ87676.1| putative Quinate/shikimate dehydrogenase [Escherichia fergusonii
ATCC 35469]
Length = 287
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ VD+ LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D + P AQ + AVNT++ DG L G+ TD + A+++A
Sbjct: 63 LRGFNVSMPNKTEICQYLDNLSPAAQLVGAVNTVVN--DDGILTGHITDGTGYMRALKEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
+ G+ + GAGGA A+ A G + + IF D F A+
Sbjct: 121 -------------NIDVIGKKMTVLGAGGAATAICVQAALDGVKEISIFNKRDKFFPNAE 167
Query: 406 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + F+ D L + + +L NAT +GM P ++ + + + LR
Sbjct: 168 QTVAKIRNNTDCEIHLFDLDDHDKLRAEIDCSVLLTNATGVGMKPFEGQMLLPDASFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE +G ++G+ M L Q F ++TGKE P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAENSGCRTINGLGMMLWQGAAAFEIWTGKEMPVDYIKSILF 287
>gi|332799771|ref|YP_004461270.1| shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|332697506|gb|AEE91963.1| Shikimate dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
Length = 290
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 146/285 (51%), Gaps = 31/285 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
++ T+++ ++ P+ HS PI+HN F + N + I++ + D +LK S D
Sbjct: 7 VSGKTQIYAILGTPISHSLSPIIHNTLFCYNNLDKIFLALNTDTNNLKLAIDAVRSFDIK 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G S+ P KE V+K+CD++ P A+ I AVN I+ + +G L+GYNTDC
Sbjct: 67 GLSITMPLKEEVVKYCDKLLPEAEIIGAVNCILNK--NGTLVGYNTDC------------ 112
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + L R+F+ GAGG G+A+A +G ++ + + ++A++L
Sbjct: 113 -TGFSMSIINKVGVLPDRVFIF-GAGGVGKAIAAELILKGVKKLFLTNRSIDKAENLRKR 170
Query: 411 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPN---TDRVPVSEETLRDYQLV 460
+ ++ +I+ + ++ ++ N T LGM+ N D VP E +R L+
Sbjct: 171 LEHLSKTEVEIIPWDKKSWNEGIKESDLIINCTSLGMYNNGNLADIVP--WELVRSNTLI 228
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
++ +Y PR+T L+ A + ++ G+ + + QA + ++TG E
Sbjct: 229 YETIYEPRETTLISKARSLNLEVIEGINLLVYQAAAAYKIWTGLE 273
>gi|421452028|ref|ZP_15901389.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
gi|400182459|gb|EJO16721.1| Shikimate 5-dehydrogenase [Streptococcus salivarius K12]
Length = 285
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P Q I AVNT++ R DG LIG+NTD +++D
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAVQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKDF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 407
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPRDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRHQSLDKAKES 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 459
++ A D+ FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|422414971|ref|ZP_16491928.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313624974|gb|EFR94873.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 301
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 30/304 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 -ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLR 455
+ + + + A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINTKTNCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 516 LAKF 519
K
Sbjct: 291 XXKL 294
>gi|367477867|ref|ZP_09477203.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 285]
gi|365269803|emb|CCD89671.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 285]
Length = 293
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 137/280 (48%), Gaps = 29/280 (10%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V LK FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLKMLLEGVRQLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV++ DE+ P A A+ AVNT++ R DG+LIG+NTD T E A+ +
Sbjct: 75 YPYKEAVVELLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDT----TGFERAVAPLVAQ 128
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 415
+G + L GAGG G+A+AF + G A + I+D + R + L S +
Sbjct: 129 SGRG---------VVALIGAGGVGKAIAFALANLGVAGLRIYDTERTRVEKLTSSLPAG- 178
Query: 416 RPFEDILNFQPEKG----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
E ++ E+ A + N TP+GM PN PV + LR V DAVY+P T
Sbjct: 179 --MEAVIAESVEEALQGVAGVVNGTPIGMLPNRG-TPVPDHLLRADLWVADAVYSPLWTP 235
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
LLK A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 236 LLKAAKARGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|289433772|ref|YP_003463644.1| hypothetical protein lse_0405 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170016|emb|CBH26556.1| aroE-1 [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 291
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 -ERAKSLASDVMGAARPF----EDILNFQPEKGAILANATPLGMHP-NTDRVPVSEETLR 455
+ + + S A+ F E+ L + + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINSKTDCKAQLFDIEDEERLRKEISESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 516 L 516
Sbjct: 291 F 291
>gi|145577899|gb|ABP82668.1| shikimate 5-dehydrogenase [Bacillus cereus]
Length = 238
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V++ L + + +GF+V P+K A+M++ D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVEEELLGEAVRGLKALGISGFNVTTPHKVAIMEYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DG+LIGYNTD + A++ E PL G
Sbjct: 61 EIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNE------------PLQG 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L G+GGA RA+ F G + + + + ++AK L +DV A E
Sbjct: 107 KRILLLGSGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADVNSVALSLEKATE 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GM P+ + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMRPHVEHTPLQICSLKKGMIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|422411890|ref|ZP_16488849.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
gi|313620437|gb|EFR91825.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
Length = 308
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 30/304 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 13 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 72
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 73 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 130
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 131 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 177
Query: 402 -ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLR 455
+ + + + A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 178 EKTVEKINTKTNCKAQLFDMEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 237
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 238 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 297
Query: 516 LAKF 519
K
Sbjct: 298 XXKL 301
>gi|62185307|ref|YP_220092.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila abortus S26/3]
gi|424825347|ref|ZP_18250334.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
gi|62148374|emb|CAH64141.1| shikimate 5-dehydrogenase [Chlamydophila abortus S26/3]
gi|333410446|gb|EGK69433.1| bifunctional 3-dehydroquinate dehydrogenase/shikimate dehydrogenase
protein [Chlamydophila abortus LLG]
Length = 477
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 212/499 (42%), Gaps = 55/499 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+DC+ + + ++ L KKP+
Sbjct: 1 MLCATISGPTFAEAKQQLLHSL-----PLVDSIELRIDCLLSLSSNELKHLVSLAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R L LAE L +Y+D + L K ++
Sbjct: 56 TL-----RKHTSLSEIAWIER--TLQLAE-LQPEYLDIDKDFPKEALAKIQKNYPK---- 103
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
+ L + + E + L M A K+ + T+ R Q+ H
Sbjct: 104 -IKIILSYHSETSEHIPNLCKEMLRQQAHHYKIAITSTKSTDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++A+ +++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGIHAPKVAPGQLSIEDLL-AYNYTNLSAEARIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K A
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLAPYELNEFFSLTRDLPFGGLSVTMPFKTA 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ + K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFH--NNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
PL + G+GGA +A+A GA++ IF+ A+ L+ G A P +
Sbjct: 327 NIPLQNMHVGIVGSGGAAKAIATTFAYSGAQISIFNRTKAHAEKLSVLCHGQAFPLHSL- 385
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
+ IL P G+ PV + D P+++ K A+ G
Sbjct: 386 -SEHHNIDILILCLPPGVDIPEIYPPV----------IIDINTLPKESLYTKKAKERGCQ 434
Query: 483 IVSGVEMFLRQAIGQFNLF 501
I+ G EMF QA+ QF+L+
Sbjct: 435 ILYGYEMFAEQALLQFSLW 453
>gi|75761259|ref|ZP_00741241.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491241|gb|EAO54475.1| Shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 229
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 126/242 (52%), Gaps = 22/242 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
+++G+I P+GHS P++HN F H+N N Y V++ L + + +GF+V
Sbjct: 3 QLYGVIGNPIGHSLSPVMHNNAFEHLNMNAHYHAFLVEEEVLGEAVRGLKALGISGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A+M++ DE+ PLA+ I AVNT++ + +G+LIGYNTD + A++ E
Sbjct: 63 TPHKVAIMEYLDEIDPLARKIGAVNTVVHK--NGRLIGYNTDGIGFVRALQSISHE---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDV 411
PL G+ +L GAGGA RA+ F G + + + + ++AK L +DV
Sbjct: 117 --------PLQGKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAARTADV 168
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A E Q I+ T +GMHP+ + P+ +L+ +V D +Y P +T
Sbjct: 169 NSVALSLEKATEEQGNYD-IIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETN 227
Query: 472 LL 473
+
Sbjct: 228 FM 229
>gi|373494926|ref|ZP_09585521.1| shikimate 5-dehydrogenase [Eubacterium infirmum F0142]
gi|371967062|gb|EHO84539.1| shikimate 5-dehydrogenase [Eubacterium infirmum F0142]
Length = 291
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 146/290 (50%), Gaps = 30/290 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
+++I+ +K++ L + P HS P++ N F +N N +Y+ V D + + +
Sbjct: 1 MKNIDGKSKLYALFASPCEHSISPLIQNSAFEKMNINAVYMAFDVGTDKIADAVLSMRTL 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
AG ++ P K AV+K+ DE+ A+ AVNT++ R DGKL GYNTD S AIED
Sbjct: 61 GIAGANISMPNKTAVIKYLDEISDDARFCNAVNTVVNR--DGKLYGYNTDIFGSEKAIED 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIF----DIDFER 403
G + L G GGAG+A+ + AK+ +V +F I+F +
Sbjct: 119 -------------LGINITNSKVCLLGLGGAGQAVLYTLAKNNVNKVCVFVRQNSIEFRK 165
Query: 404 A------KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRD 456
+ + + DV A + +L+ + +L N T LGM + D+ P+ +E L +
Sbjct: 166 SYVDKIRSNFSIDVDIYAIEEQVLLSKHINEADLLINTTKLGMAQDIDKSPLDDEFKLPE 225
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKE 505
+ V D +Y P +TRLL A+A G I S G+ M + Q + F FTGK+
Sbjct: 226 HICVLDLIYNPGETRLLAKAKADGCIRYSNGLNMLVYQGVKSFEHFTGKK 275
>gi|398311509|ref|ZP_10514983.1| shikimate 5-dehydrogenase [Bacillus mojavensis RO-H-1]
Length = 278
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 24/289 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++G+I P+ HS P +HN + + +G Y V D L+ + G +V
Sbjct: 3 KLYGVIGNPIAHSMSPDIHNAALKDLGLDGHYHAFKVEEDSLEDAVKGIRALGLQGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++M D + A+ + AVNT+ RR D KL+GYNTD E + ++ + +
Sbjct: 63 VPHKVSIMDHLDHIDESAKVLGAVNTV-RREGD-KLVGYNTDGEGFVRSLMRILDK---- 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
P++ F++ GAGGA RA+ + + I + E+AK L +D +
Sbjct: 117 --------PISELSFLMIGAGGAARAIFTTIVRDNPEKFDICNRTIEKAKQL-TDSAPSF 167
Query: 416 RPFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
R E +L+ + E+ ++ + T +GM+PN + +P+S + +V D VY P +T
Sbjct: 168 RNVE-VLSIKEAEERLEQYDVIIHTTSVGMYPNVEDIPLSLQRAASSAVVCDIVYNPIQT 226
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LLK+A+ G + GV MF+ QA F L+TG E E MR IV+ K
Sbjct: 227 SLLKEAKQKGLKTLDGVGMFVEQAALSFRLWTGHEPDVEKMRSIVVGKL 275
>gi|385809656|ref|YP_005846052.1| shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
gi|383801704|gb|AFH48784.1| Shikimate 5-dehydrogenase [Ignavibacterium album JCM 16511]
Length = 290
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 155/304 (50%), Gaps = 36/304 (11%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ ++ T++ GL+ P+ H+ P +HN F + IY+P V +LK +
Sbjct: 3 DSMHLKTQLVGLVGHPIKHTYSPFIHNVAFELTGLDYIYLPFNVIPSNLKSAIKGLVALG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
+ GF+V P+K V +F +V A + A+NT++ +GK+ GYNTD + ++
Sbjct: 63 YKGFNVTIPHKVKVKEFMSKVSEEASFVGAINTVLIE--EGKMFGYNTDVAGVLESLYAY 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG--AKSRGARVVIFDIDFERAKSL 407
KE +A V+ GAGG+ RA+ + R +R+ + + +RA++L
Sbjct: 121 RKE-------------IADNECVVIGAGGSARAVIYTLIKHFRPSRIHLVNRTEQRAETL 167
Query: 408 A----------SDVMGAARP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
S + P +DI+ + ++ NAT +GMHP+ D ++++ L
Sbjct: 168 RQFFKTKIKFDSFTVNELIPPDIKDII----KNSVLIVNATSVGMHPDEDDAVLTQKDLF 223
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
Q+VFD VY P +T+LLK AE+AGA V G++M + QA F ++TG++ P E + +
Sbjct: 224 SKEQIVFDLVYNPAQTKLLKLAESAGAKTVDGIKMLVNQAAKSFEIWTGEKMPVEQVEKA 283
Query: 515 VLAK 518
+L K
Sbjct: 284 LLLK 287
>gi|327507667|sp|C0S433.1|ARO1_PARBP RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|225681904|gb|EEH20188.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb03]
Length = 1603
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 229/536 (42%), Gaps = 62/536 (11%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWA 76
SN+ + G+D VE+R+D + + Q P D + ++ ++ +P++ R K
Sbjct: 1074 SNILKEVTLGSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQ 1133
Query: 77 GGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D + L+ LA +G+++VD EL +L + + G I++ + D E
Sbjct: 1134 GGRFPDDAYDAALQLYRLAIRMGSEFVDLELSFPKQLL--RTVTEMKGFSKIIASHHDPE 1191
Query: 136 TPSEEDLGYLVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVG 189
G + D+IKLV + + A + + + + VP+IA ++G
Sbjct: 1192 GLLSWANGSWIQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMG 1251
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKP 247
+G +S++L NG + S P P S R+ K + + K F +I KP
Sbjct: 1252 YKGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLMGEIKAKKFAVIGKP 1307
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V S+ P +HN F+ + Y + D+++ SPDF G SV P K +M
Sbjct: 1308 VSSSRSPAMHNALFKQMGLPHTYGRIETDNVEDVKEFILSPDFGGASVTIPLKLDIMPLL 1367
Query: 308 DEVHPLAQAIAAVNTIIRRPS-------DGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
DE+ P A+ I AVNTI+ P+ +LIG NTD + + + DA G
Sbjct: 1368 DEIAPEAEMIGAVNTIVSVPAAPGDKFQSSRLIGRNTDWQGMVRCLSDA--------GAY 1419
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG--AARP 417
S +P ++ G GG RA F S + + I E+ +AS R
Sbjct: 1420 SAATPTTSSAGLIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYNIRI 1479
Query: 418 FEDILNFQPEKGAILANAT-----PLGMHPN---------TDRVPVSEET---LRDYQLV 460
+D+ E ++A T P+ +H ++ V E + +++
Sbjct: 1480 VDDVKAL--ESLPMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAERKTGITPKRIL 1537
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ Y P T L+K A AG ++ G+E+ + Q + Q +T E R+ V+
Sbjct: 1538 LEMAYKPSVTSLMKLASDAGWTVLPGLEVLVAQGVYQSEYWTDITPVYENARKAVM 1593
>gi|217965421|ref|YP_002351099.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|386007213|ref|YP_005925491.1| aroE-1 [Listeria monocytogenes L99]
gi|386025803|ref|YP_005946579.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
gi|217334691|gb|ACK40485.1| shikimate 5-dehydrogenase [Listeria monocytogenes HCC23]
gi|307570023|emb|CAR83202.1| aroE-1 [Listeria monocytogenes L99]
gi|336022384|gb|AEH91521.1| shikimate 5-dehydrogenase [Listeria monocytogenes M7]
Length = 291
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G+ + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GNDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|421873988|ref|ZP_16305597.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
gi|372457099|emb|CCF15146.1| shikimate 5-dehydrogenase [Brevibacillus laterosporus GI-9]
Length = 277
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 24/288 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 297
+ GL +PVGHS P++HN F Y V+D +K+ + G +V
Sbjct: 1 MVGLFGRPVGHSLSPVMHNTAFEQKQLPFAYAAFEVNDDQIKEAVEAIRALGMRGANVTI 60
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K AV+ + D++ PLA+ I AVNTI+ DG LIGYNTD + ++ ++E G
Sbjct: 61 PHKVAVIPYLDKIDPLAERIGAVNTIVNE--DGTLIGYNTDGTGYVRSL---LEETGID- 114
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAAR 416
L + L GAGGA RA+A RG + + I + ERA+ LA +G+
Sbjct: 115 --------LTEQTVTLLGAGGAARAVACTLVERGVKEIRIVNRSLERAELLAL-ALGSQI 165
Query: 417 PFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
P + +F + AI L N T +GM+P+ +PV + LR +V D +Y P +T+
Sbjct: 166 PIR-VYSFAHAELAIQDSTLLINTTSIGMYPHIHEMPVDRKCLRPDLIVSDLIYNPLETQ 224
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL+ A+ GA SG+ MF+ Q + L+TG+ AP + MREIVL
Sbjct: 225 LLQCAKEIGATHHSGLGMFINQGALAYELWTGEAAPTDKMREIVLQHL 272
>gi|45358499|ref|NP_988056.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
gi|74554623|sp|Q6LYQ2.1|AROE_METMP RecName: Full=Shikimate dehydrogenase
gi|44921257|emb|CAF30492.1| shikimate 5-dehydrogenase [Methanococcus maripaludis S2]
Length = 278
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 156/294 (53%), Gaps = 25/294 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ TK+ GLI PV HS PI+HN + + N Y V ++LK + + +F
Sbjct: 2 INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD A+E+
Sbjct: 62 GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV--KIENGKAIGYNTDGIGVKKALEE--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
K G + ++ G+GGA RA++F ++ + I + + E+A++L+ ++
Sbjct: 117 ----KTGILIN------KNILIIGSGGASRAVSFEL-AKDNNLTIVNRNIEKAENLSKEI 165
Query: 412 MGAARPFEDILNF-----QPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVY 465
+ E+ LN+ E I+ N TP+GM+P+T+ PV ++ +V D +Y
Sbjct: 166 SRKLKK-ENPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIY 224
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P + LK+A+ GA ++G+ M + Q F ++TG + M++ +++K
Sbjct: 225 NPLEPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGIKPDIFVMKKSIISKI 278
>gi|386080684|ref|YP_005994209.1| shikimate 5-dehydrogenase [Pantoea ananatis PA13]
gi|354989865|gb|AER33989.1| shikimate 5-dehydrogenase AroE [Pantoea ananatis PA13]
Length = 287
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +L+K + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGTAELEKVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V ++ D + P AQ + AVNT++ +G L G+ TD
Sbjct: 63 LRGCNVSMPNKTEVCRYLDTLSPAAQLVGAVNTVVN--DNGVLTGHITD----------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 409
GY A G + G+ + GAGGA A+ A G + + ++ + A
Sbjct: 110 --GTGYMRALAEEGIDILGKKMTILGAGGAATAICVQAALDGVKAISVFNQRDKFFANAQ 167
Query: 410 DVMGAARPFEDI------------LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + R D L + IL NAT +GM P ++ + +E+ LR
Sbjct: 168 ETVAKIRAHTDCEIHLFDLDDHDRLRAEINDSVILTNATGVGMKPFEGQMLLPDESFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G I++G+ M L Q F ++TGK P + ++ I+
Sbjct: 228 ELIVSDVVYIPRKTHLLETAEKKGCRIINGLGMMLWQGASAFEIWTGKPMPVDHIKNILF 287
>gi|365882753|ref|ZP_09421946.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 375]
gi|365288883|emb|CCD94477.1| putative Shikimate dehydrogenase [Bradyrhizobium sp. ORS 375]
Length = 293
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 133/277 (48%), Gaps = 23/277 (8%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGLRCHYQLIEVAGADRAGLSSLLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV++ DE+ P A+A+ AVNT++ R G+LIG+NTD A+ + + G
Sbjct: 75 YPYKEAVVELLDELAPKAEAMGAVNTVVVR--GGRLIGHNTDTTGFERAVAPLVNQTGRG 132
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDV-MGA 414
+ L GAGG G+A+AF + G + IFD + RA+ LA + G
Sbjct: 133 -------------VVALIGAGGVGKAIAFALANLGVVGLRIFDTERARAERLAQLLSTGT 179
Query: 415 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
D + + + N TP+GM PN PV + LR V DAVY+P T LLK
Sbjct: 180 KVTVVDSVEAALQDAVGVVNGTPIGMLPNRG-TPVPDHLLRADLWVADAVYSPLWTPLLK 238
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
A+A GA ++ G E+ + QA F LFTG A E M
Sbjct: 239 AAKARGAQVLLGRELAIYQAADAFELFTGLAASTEAM 275
>gi|303249289|ref|ZP_07335521.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
gi|302489295|gb|EFL49252.1| Shikimate dehydrogenase substrate binding domain protein
[Desulfovibrio fructosovorans JJ]
Length = 270
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 135/287 (47%), Gaps = 34/287 (11%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 295
++VFG+I P+GH+ P++HN F+ Y P ++L F G SV
Sbjct: 2 SRVFGIIGHPLGHTLSPLVHNWGFKRFGIKARYEAWPTLPEELGAFMVRLRETPVEGLSV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K VM + D V L +++ AVNT+ R DG+L NTD E
Sbjct: 62 TIPHKTPVMAYVDAVTDLGRSVGAVNTLYWR--DGELWAENTDVE--------------- 104
Query: 356 KNGTASFGSPL-----AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
F PL A R ++ G GG RA G G R+ + E+A LA
Sbjct: 105 -----GFCRPLVLRGIAPRAALILGCGGVARAAVAGLVRLGVERLAVTGRSAEKAAVLAG 159
Query: 410 DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPR 468
+ ++ +F +L NATP+GM + + P E L +V+D VYTP
Sbjct: 160 EFGLERVDWDRRADF---PAGLLVNATPMGMTGRLEGLSPYPAEALGPDHVVYDLVYTPD 216
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
T DA AAG ++VSG+EMFL QA+ QF L+TG+ P + +R ++
Sbjct: 217 PTHFGADALAAGGLVVSGMEMFLYQAVEQFRLWTGRILPDDELRTLL 263
>gi|254424583|ref|ZP_05038301.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7335]
gi|196192072|gb|EDX87036.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7335]
Length = 303
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 153/312 (49%), Gaps = 46/312 (14%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNG----IYVPMFV--DDLKKFFSTYSS 287
I T++ G+I P+ HS P++HN H+ G +Y+P V ++LK + +
Sbjct: 3 IKGTTQLLGVIGYPIKHSFSPLMHNAAIAHLRETGPADYVYLPFPVHPENLKDAIIGFKA 62
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
GF++ P+K+ ++ DEV +A+AI AVNT+ Y T + +
Sbjct: 63 IGLRGFNITIPHKQTIIPLLDEVSEVAKAIGAVNTVW----------YGTWNKG-----D 107
Query: 348 DAIKERGY---KNGTASFGSPLAG--------RMFVLAGAGGAGRALAFGAKSRGA-RVV 395
D+ +E G+ F SPL R VL G GGA RA+ G R+
Sbjct: 108 DSSQESGWCGTNTDAIGFLSPLQALKQDWTNTRAIVL-GNGGASRAVVAACHQLGCKRIS 166
Query: 396 IFDIDFER----AKSLASDVMGAAR----PFEDILNFQPEKGAILANATPLGMHPNTDRV 447
+ + E+ A+S A+ AAR +E++ + Q ++ ++ NATP+GMHPNTD
Sbjct: 167 VVGRNLEKLAWFAESWANSPDIAARLKVMTWEELPD-QLQRAGLVVNATPVGMHPNTDAS 225
Query: 448 PVSEETLR---DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
+S++ L + +D +YTPR T+ L+ A AAG V G+EM ++Q ++ +
Sbjct: 226 VLSDDELALLPTGAIAYDLIYTPRPTKFLRQAAAAGLTTVDGLEMLVQQGAAALEIWLDR 285
Query: 505 EAPKEFMREIVL 516
AP + MR +L
Sbjct: 286 PAPIDIMRRSLL 297
>gi|297571483|ref|YP_003697257.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
gi|296931830|gb|ADH92638.1| shikimate 5-dehydrogenase [Arcanobacterium haemolyticum DSM 20595]
Length = 288
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 136/293 (46%), Gaps = 39/293 (13%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
FGLI P+ HS P++HN +FR + + Y + V D+ ++ + AG +V P
Sbjct: 5 FGLIGDPIEHSLSPLIHNTSFRALGIDATYSLLEVPDHDVPSAIRSFKNLGIAGINVTMP 64
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK AV+ E+ P A+ +VNT+ R D ++IG++TD + + DA
Sbjct: 65 YKRAVLPALHELTPTAELAQSVNTVAFR--DNQIIGHSTDGLGMLKPLRDA--------- 113
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSLASDVMGA 414
G L+ ++ G+GGAG ++A A GAR V ERA LA+ +
Sbjct: 114 ----GIDLSHEHILILGSGGAGTSVALAAAQSGARRVTLMNREGAGLERAHRLAARI--- 166
Query: 415 ARPFED----------ILNFQPEK----GAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
R D + E+ ++ N T GM+PN PV E L + +V
Sbjct: 167 -RELPDESCTIGVVPLATTVETERCVRDATVILNCTAAGMNPNPHATPVPTEWLSNRHVV 225
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
DAVYTPR T+ L+DA AGA G+ M + QA L+ P E++ E
Sbjct: 226 MDAVYTPRVTQFLRDASVAGARTFDGLSMLVAQAALAEELWLECTMPTEYVIE 278
>gi|295660620|ref|XP_002790866.1| pentafunctional AROM polypeptide [Paracoccidioides sp. 'lutzii' Pb01]
gi|327507665|sp|C1H8L1.1|ARO1_PARBA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|226281118|gb|EEH36684.1| pentafunctional AROM polypeptide [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1523
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 227/525 (43%), Gaps = 68/525 (12%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWA 76
SN+ + G+D VE+R+D + + Q P D + ++ ++ +P++ R K
Sbjct: 985 SNILKEVTLGSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQ 1044
Query: 77 GGLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D + L+ LA +G+++VD EL +L + + G I++ + D E
Sbjct: 1045 GGRFPDDAYDAALRLYCLAIRMGSEFVDLELSFPEQLL--RTVTEMKGFSKIIASHHDPE 1102
Query: 136 TPSEEDLGYLVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVG 189
G + D+IKLV + + A + + + + VP+IA ++G
Sbjct: 1103 GLLSWANGSWIQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMG 1162
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKP 247
+G +S++L NG + S G P P S R+ K + + K F +I KP
Sbjct: 1163 YKGQLSRIL----NGFMTPVSHPGLPFKAAPGQLSAREIRKGLSLMGEIKAKKFAVIGKP 1218
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVD---DLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
V S+ P +HN F+ + Y + D D+K+F SPDF G SV P K +M
Sbjct: 1219 VSSSRSPAMHNALFKQMGLPHTYGRIETDNPEDVKEFIR---SPDFGGASVTIPLKLDIM 1275
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPS-------DGKLIGYNTDCEASITAIEDAIKERGYKN 357
DE+ P A+ I AVNTI+ P+ +LIG NTD + + + DA
Sbjct: 1276 PLLDEIAPEAEMIGAVNTIVSVPAAPGDKSQSSRLIGRNTDWQGMVRCLSDA-------- 1327
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG--A 414
G S +P ++ G GG RA F S + + I E+ +AS
Sbjct: 1328 GAYSAATPTTSSAGLIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYN 1387
Query: 415 ARPFEDILNFQPEKGAILANAT-----PLGMHPN---------TDRVPVSEET---LRDY 457
R +D+ E ++A T P+ +H ++ V E +
Sbjct: 1388 IRIVDDVKAL--ESLPMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAERRTGITPK 1445
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
+++ + Y P T L+K A AG ++ G+E+ + Q + Q +T
Sbjct: 1446 RILLEMAYKPSVTSLMKLASDAGWTVLPGLEVLVAQGVYQSEYWT 1490
>gi|422408579|ref|ZP_16485540.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
gi|313610573|gb|EFR85686.1| shikimate dehydrogenase [Listeria monocytogenes FSL F2-208]
Length = 298
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 13 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 72
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 73 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 130
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 131 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 177
Query: 402 -ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLR 455
+ + + S A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 178 EKTVEKINSKTDCKAKLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 237
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 238 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 297
Query: 516 L 516
Sbjct: 298 F 298
>gi|365902310|ref|ZP_09440133.1| shikimate 5-dehydrogenase [Lactobacillus malefermentans KCTC 3548]
Length = 293
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 146/302 (48%), Gaps = 31/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
E ++ T + GL++ P+ HS P +HN F + N Y+ + + L +
Sbjct: 2 TERLDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNFAYLAFEITNEKLPGAIDAIRTL 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G ++ P K+ V+ D++ P + I AVNT++ +G L GY TD
Sbjct: 62 DMRGSNISMPNKQKVIPLLDKLDPATEMIGAVNTVVN--DNGVLTGYTTDG--------- 110
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERA 404
G+ A G + G+ LAGAGGA +A A G + + IF D F+ A
Sbjct: 111 ----IGFMKSLADEGLDIRGKKMTLAGAGGAATPMAIQAALDGVKEISIFNRHDEFFDNA 166
Query: 405 K------SLASDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LR 455
K + +D ED +F+ E + I A+AT +GM+P D+ V++ T
Sbjct: 167 KRNVDIINEKTDCKATLHELEDQDDFKKEIASSYIYADATSVGMNPLQDQTLVTDPTWFS 226
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+ Q+VFD VY PR T+L+ AE AG + +G+ M L Q F L+T K+ P +++REI
Sbjct: 227 EDQIVFDTVYAPRDTKLMAVAEKAGVKHVFNGLGMMLEQGAAAFKLWTKKDMPVDYIREI 286
Query: 515 VL 516
+
Sbjct: 287 LF 288
>gi|340399205|ref|YP_004728230.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
gi|338743198|emb|CCB93706.1| shikimate dehydrogenase [Streptococcus salivarius CCHSS3]
Length = 285
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 139/290 (47%), Gaps = 31/290 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 407
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 459
++ A D+ FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCHLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|347447766|pdb|3TOZ|A Chain A, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447767|pdb|3TOZ|B Chain B, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447768|pdb|3TOZ|C Chain C, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447769|pdb|3TOZ|D Chain D, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447770|pdb|3TOZ|E Chain E, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447771|pdb|3TOZ|F Chain F, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447772|pdb|3TOZ|G Chain G, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347447773|pdb|3TOZ|H Chain H, 2.2 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Nad.
gi|347948704|pdb|3TNL|A Chain A, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948705|pdb|3TNL|B Chain B, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948706|pdb|3TNL|C Chain C, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad.
gi|347948707|pdb|3TNL|D Chain D, 1.45 Angstrom Crystal Structure Of Shikimate
5-Dehydrogenase From Listeria Monocytogenes In Complex
With Shikimate And Nad
Length = 315
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 30 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 89
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 90 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 147
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 148 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 194
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 195 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 253
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 254 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 313
Query: 515 VL 516
+
Sbjct: 314 LF 315
>gi|254829415|ref|ZP_05234102.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
gi|258601829|gb|EEW15154.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N3-165]
Length = 291
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHKQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|238854373|ref|ZP_04644715.1| shikimate dehydrogenase [Lactobacillus jensenii 269-3]
gi|260665066|ref|ZP_05865916.1| shikimate 5-dehydrogenase [Lactobacillus jensenii SJ-7A-US]
gi|313472984|ref|ZP_07813471.1| shikimate dehydrogenase [Lactobacillus jensenii 1153]
gi|238832995|gb|EEQ25290.1| shikimate dehydrogenase [Lactobacillus jensenii 269-3]
gi|239528824|gb|EEQ67825.1| shikimate dehydrogenase [Lactobacillus jensenii 1153]
gi|260561120|gb|EEX27094.1| shikimate 5-dehydrogenase [Lactobacillus jensenii SJ-7A-US]
Length = 307
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ T + GL++ P+ HS P +HN F + N Y+ +D+ L K + D
Sbjct: 16 LDGHTYLIGLMAYPIRHSMSPTMHNNAFAKLGLNFTYLCFEIDNKKLPKAVEAIRTLDMR 75
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K+ V+K+ D++ P ++ AVNTI+ +G L GY TD + ++ED
Sbjct: 76 GSNVSMPNKKEVIKYLDKLSPASEMCDAVNTIVN--DNGVLTGYTTDGIGFMKSLEDE-- 131
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
G + G+ LAGAGGA +A A G + + IF+++ ++ +
Sbjct: 132 -----------GIDIRGKKMCLAGAGGAATPIAVQAALDGVSEIEIFNLNDDKWAQAEKN 180
Query: 411 VM---------GAARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEET-LRDYQ 458
V + ED +F+ + I +AT +GM P D V + + +
Sbjct: 181 VKTINEKTNCKASLHHLEDKDDFKRAISECDIYCDATGVGMKPLEDMTLVEDPSWFHEDM 240
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VFD VY PR T+L+K A+ AG +++G+ M + Q + F L+TGK+ P +++RE++
Sbjct: 241 TVFDTVYAPRTTKLMKVAQKAGVKHVLNGIGMMIEQGVAAFKLWTGKDMPTDYIREVIF 299
>gi|311031592|ref|ZP_07709682.1| shikimate 5-dehydrogenase [Bacillus sp. m3-13]
Length = 278
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 24/283 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+ HS P++HN F + Y V D L+ + GF+V
Sbjct: 4 LYGVIGSPIAHSMSPLIHNDAFLQNGMDAHYHAFHVEPDQLETAVAGMRVLGINGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+KEA++ D V A I AVNT++ R DG+LIGYNTD + A+++ +K
Sbjct: 64 PHKEAIIPLLDSVDDAALQIGAVNTVVNR--DGELIGYNTDGRGFVEALKEVVK------ 115
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAAR 416
L + ++ GAGGA RA+ + A +G ++ I + +A+ L + R
Sbjct: 116 --------LKDKHVLIIGAGGAARAILYTLALEKGVQIDICNRTVSKAEDLIRE-FSLER 166
Query: 417 PFEDILNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
I Q ++ ++ T +GM+P + +P+ ++++ + + D +Y P +T+L
Sbjct: 167 ITRSITVDQAAREIQRYDVVVQTTSVGMYPKINDIPLPLKSIKQHAVFTDIIYNPIETKL 226
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
L++A+A GAI +G+ MF QA F ++TGK M+++V
Sbjct: 227 LQEAKAIGAITQNGIHMFAYQAALAFEIWTGKFPDTVRMKKLV 269
>gi|357051701|ref|ZP_09112869.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
gi|355379429|gb|EHG26591.1| shikimate 5-dehydrogenase [Enterococcus saccharolyticus 30_1]
Length = 289
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I T++ L +KP HS P +HN +F + +Y+ VD L + D
Sbjct: 5 ITGHTRLAALFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLL 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K A + DE+ P A+ I A+NTI+ G LIG+NTD + A+ D
Sbjct: 65 GVNLSMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDGIGFMRALGDIEV 122
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
S + G M V+ GAGGA A+ A G + +F+ + E + S
Sbjct: 123 ------------SIIGGTMTVI-GAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESK 169
Query: 411 VMGAARPF-----------EDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQ 458
+ A + L ++ +L NAT +GM P D P+ + LR+
Sbjct: 170 LQQIAAATTCNITLGDLDDQQALGLAIKESQLLVNATGVGMKPQEDASPLKDRGMLRESL 229
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y PR+TRLL+DA+AAGA +G+ M L Q F L+T K+ P E ++ ++
Sbjct: 230 AVYDVIYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWTDKKMPIEKVKTLI 286
>gi|315301589|ref|ZP_07872696.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
gi|313630036|gb|EFR98062.1| shikimate 5-dehydrogenase [Listeria ivanovii FSL F6-596]
Length = 291
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 -ERAKSLASDVMGAARPF----EDILNFQPEKGAILANATPLGMHP-NTDRVPVSEETLR 455
+ + + S A+ F E+ L + + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINSKTDCKAQLFDMEDEEQLRKEISESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T +E P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHREMPVDYIKEIL 290
Query: 516 L 516
Sbjct: 291 F 291
>gi|336248715|ref|YP_004592425.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
gi|334734771|gb|AEG97146.1| shikimate 5-dehydrogenase [Enterobacter aerogenes KCTC 2190]
Length = 287
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E + T++ GLI+ P+ HS P +HN F H+ + Y+ VD+ LK + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + ++ D++ P AQ + AVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
G + G+ + GAGGA A++ A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTILGAGGAATAISVQAALDGVKAISIFNRKDKFFANAE 167
Query: 406 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + F+ D L + + IL NAT +GM P ++ + ++ LR
Sbjct: 168 QTVAKIRDNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E+++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKEMPVEYVKSILF 287
>gi|84489456|ref|YP_447688.1| hypothetical protein Msp_0647 [Methanosphaera stadtmanae DSM 3091]
gi|121724206|sp|Q2NGK8.1|AROE_METST RecName: Full=Shikimate dehydrogenase
gi|84372775|gb|ABC57045.1| AroE [Methanosphaera stadtmanae DSM 3091]
Length = 283
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 30/283 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I T + G+I P+ HS P +HN ++ +N + YVP V+ +LK ++ + +
Sbjct: 2 ITGKTLITGVIGHPIEHSFSPPMHNNAYKLMNMDYKYVPFHVEVENLKHVITSAKTLNIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K ++ + DE+ A+ I AVNTI + DG GYNTD +I +IE
Sbjct: 62 GLNVTIPHKTTIIPYLDEIDETAEKIGAVNTINFK--DGIAKGYNTDGIGAIVSIEKY-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ L + ++ GAGGA +A+ F ++ ++++ + + A+ L ++
Sbjct: 118 ------------TSLKDKNIMIIGAGGASKAITFTLLNKNINQLIVANRSKDNAQKLITN 165
Query: 411 VMGAARPFEDI--LNFQPEKGAI-----LANATPLGMHPNTDRV--PVSEETLRDYQLVF 461
+ FE+I +N + I + N TP+GM+P D V P+ + + V
Sbjct: 166 LKNQTN-FENIDFINIKKTDNVIDDVDIIINTTPIGMYPK-DEVAPPIKTDKISSKHTVM 223
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
D +Y P +T+LLK ++ GA + G M + Q I F +FTGK
Sbjct: 224 DIIYNPLETQLLKQSKKQGATTIPGTHMLINQGIKAFEIFTGK 266
>gi|327507666|sp|C1FYJ9.1|ARO1_PARBD RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|226289074|gb|EEH44586.1| pentafunctional AROM polypeptide [Paracoccidioides brasiliensis Pb18]
Length = 1538
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 229/536 (42%), Gaps = 62/536 (11%)
Query: 27 SNMYQAKAEGADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWA 76
SN+ + G+D VE+R+D + + Q P D + ++ ++ +P++ R K
Sbjct: 985 SNILKEVTLGSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRVSVPLVFTIRTKSQ 1044
Query: 77 GGLYEGDEHKR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE 135
GG + D + L+ LA +G+++VD EL +L + + G I++ + D E
Sbjct: 1045 GGRFPDDAYDAALQLYRLAIRMGSEFVDLELSFPEQLL--RTVTEMKGFSKIIASHHDPE 1102
Query: 136 TPSEEDLGYLVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVG 189
G + D+IKLV + + A + + + + VP+IA ++G
Sbjct: 1103 GLLSWANGSWIQIYNKALQYGDVIKLVGVAKTLDDNASLKKFKTWAEAKHDVPLIAINMG 1162
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKP 247
+G +S++L NG + S P P S R+ K + + K F +I KP
Sbjct: 1163 YKGQLSRIL----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLMGEIKAKKFAVIGKP 1218
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
V S+ P +HN F+ + Y + D+++ SPDF G SV P K +M
Sbjct: 1219 VSSSRSPAMHNALFKQMGLPHTYGRIETDNVEDVKEFILSPDFGGASVTIPLKLDIMPLL 1278
Query: 308 DEVHPLAQAIAAVNTIIRRPS-------DGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
DE+ P A+ I AVNTI+ P+ +LIG NTD + + + DA G
Sbjct: 1279 DEIAPEAEMIGAVNTIVSVPAAPGDKSQSSRLIGRNTDWQGMVRCLSDA--------GAY 1330
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMG--AARP 417
S +P ++ G GG RA F S + + I E+ +AS R
Sbjct: 1331 SAATPTTSSAGLIIGGGGTARAAIFALNSMSYSPIYIVGRSPEKLACMASSFPADYNIRI 1390
Query: 418 FEDILNFQPEKGAILANAT-----PLGMHPN---------TDRVPVSEET---LRDYQLV 460
+D+ E ++A T P+ +H ++ V E + +++
Sbjct: 1391 VDDVKAL--ESLPMVAIGTIPGDKPIELHMREVLCEILSLCEKANVEAERKTGITPKRIL 1448
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ Y P T L+K A AG ++ G+E+ + Q + Q +T E R+ V+
Sbjct: 1449 LEMAYKPSVTSLMKLASDAGWTVLPGLEVLVAQGVYQSEYWTDITPVYENARKAVM 1504
>gi|16802533|ref|NP_464018.1| shikimate 5-dehydrogenase [Listeria monocytogenes EGD-e]
gi|46906736|ref|YP_013125.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093115|ref|ZP_00230891.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116871881|ref|YP_848662.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|226223116|ref|YP_002757223.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824236|ref|ZP_05229237.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|254853859|ref|ZP_05243207.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|254933245|ref|ZP_05266604.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|254992917|ref|ZP_05275107.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-064]
gi|255026373|ref|ZP_05298359.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-003]
gi|255522129|ref|ZP_05389366.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-175]
gi|284800765|ref|YP_003412630.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284993951|ref|YP_003415719.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290894365|ref|ZP_06557329.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|300765141|ref|ZP_07075127.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|386042817|ref|YP_005961622.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|386049417|ref|YP_005967408.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|386731259|ref|YP_006204755.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404280041|ref|YP_006680939.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404282928|ref|YP_006683825.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404285853|ref|YP_006692439.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404406955|ref|YP_006689670.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404409722|ref|YP_006695310.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|405748855|ref|YP_006672321.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|405751719|ref|YP_006675184.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|405754575|ref|YP_006678039.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|405757484|ref|YP_006686760.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|406703270|ref|YP_006753624.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|417314539|ref|ZP_12101236.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|417316779|ref|ZP_12103412.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|424713379|ref|YP_007014094.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424822233|ref|ZP_18247246.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|24211508|sp|Q8Y9N5.1|AROE_LISMO RecName: Full=Shikimate dehydrogenase
gi|67460331|sp|Q723F9.1|AROE_LISMF RecName: Full=Shikimate dehydrogenase
gi|16409866|emb|CAC98569.1| lmo0490 [Listeria monocytogenes EGD-e]
gi|46880001|gb|AAT03302.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018488|gb|EAL09245.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 4b H7858]
gi|116740759|emb|CAK19879.1| shikimate 5-dehydrogenase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|225875578|emb|CAS04281.1| Putative shikimate 5-dehydrogenase [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258607244|gb|EEW19852.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL R2-503]
gi|284056327|gb|ADB67268.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5578]
gi|284059418|gb|ADB70357.1| shikimate 5-dehydrogenase [Listeria monocytogenes 08-5923]
gi|290556072|gb|EFD89622.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J2-071]
gi|293584805|gb|EFF96837.1| shikimate 5-dehydrogenase [Listeria monocytogenes HPB2262]
gi|293593469|gb|EFG01230.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-194]
gi|300514112|gb|EFK41173.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL N1-017]
gi|328467560|gb|EGF38622.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1816]
gi|328475795|gb|EGF46531.1| shikimate 5-dehydrogenase [Listeria monocytogenes J1-220]
gi|332310913|gb|EGJ24008.1| Shikimate dehydrogenase [Listeria monocytogenes str. Scott A]
gi|345536051|gb|AEO05491.1| shikimate 5-dehydrogenase [Listeria monocytogenes 10403S]
gi|346423263|gb|AEO24788.1| shikimate dehydrogenase [Listeria monocytogenes FSL R2-561]
gi|384390017|gb|AFH79087.1| shikimate 5-dehydrogenase [Listeria monocytogenes 07PF0776]
gi|404218055|emb|CBY69419.1| shikimate 5-dehydrogenase [Listeria monocytogenes ATCC 19117]
gi|404220919|emb|CBY72282.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2378]
gi|404223775|emb|CBY75137.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2540]
gi|404226676|emb|CBY48081.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2755]
gi|404229548|emb|CBY50952.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC5850]
gi|404232430|emb|CBY53833.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2372]
gi|404235366|emb|CBY56768.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2479]
gi|404241104|emb|CBY62504.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC2376]
gi|404244782|emb|CBY03007.1| shikimate 5-dehydrogenase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406360300|emb|CBY66573.1| shikimate 5-dehydrogenase [Listeria monocytogenes L312]
gi|424012563|emb|CCO63103.1| Shikimate dehydrogenase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 291
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|322387345|ref|ZP_08060955.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|419842613|ref|ZP_14365950.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|321141874|gb|EFX37369.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
gi|385703558|gb|EIG40671.1| shikimate dehydrogenase [Streptococcus infantis ATCC 700779]
Length = 284
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A I AVNTI+ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIAYLDQLSEEACLIGAVNTIVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLA 408
+G+ SF ++ + VL GAGGA +A+ A G +++ IF E+ +
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAILAQAILDGVSQISIFVRSSSMEKTRPYL 165
Query: 409 SDVMGAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
+ A ED+ + Q K +L NAT +GM ++ +P S L + +V
Sbjct: 166 EKIQNATGFRVDLFALEDVQDLQDSITKADLLVNATSVGMDGSSQPIPTSI-VLPEKLMV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A+ G ++G+ M L QA F L+TGKE P + + E++ K+
Sbjct: 225 ADVIYQPFETPFLKWAKEQGNQSINGLGMLLYQAAEAFELWTGKEMPTDQIWELLKQKY 283
>gi|170742862|ref|YP_001771517.1| shikimate 5-dehydrogenase [Methylobacterium sp. 4-46]
gi|168197136|gb|ACA19083.1| shikimate 5-dehydrogenase [Methylobacterium sp. 4-46]
Length = 285
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 137/284 (48%), Gaps = 27/284 (9%)
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFA 291
+ + GLI P+ HS P +H + Y + + L+ FA
Sbjct: 7 NRALLGLIGAPIKHSASPAMHEAAAEALGMRAHYQLIEIAGADAGLLRSLLDGVRHLGFA 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V FPYKEAV+ D++ P A+A+ AVNT++ G+LIG+NTD A+
Sbjct: 67 GVNVTFPYKEAVLPLLDDLSPGARAVGAVNTVVV--EGGRLIGHNTDASGFGRAL----- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 410
+FG AG + L GAGG G+A+A + G + + D D +A++LA+
Sbjct: 120 -------VQTFGPAPAGPV-ALIGAGGVGKAIAVALSDVPGTEIRLVDTDPAKARALAAS 171
Query: 411 VMGAAR---PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
+ G A +G L N TP+GM PN D PV LR V DAVY+P
Sbjct: 172 LDGRAEIRVCAGAEEALAGARG--LVNGTPIGMLPNRD-APVPLHLLRPDLWVADAVYSP 228
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
T LL A A GA ++G + + QA+ F LFTG+EAP+ M
Sbjct: 229 LWTPLLTAARALGAPTMTGRALAIHQALDAFRLFTGREAPQAAM 272
>gi|47094716|ref|ZP_00232331.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|254911162|ref|ZP_05261174.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|254935490|ref|ZP_05267187.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|386046141|ref|YP_005964473.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
gi|47016856|gb|EAL07774.1| shikimate 5-dehydrogenase [Listeria monocytogenes str. 1/2a F6854]
gi|258608067|gb|EEW20675.1| shikimate 5-dehydrogenase [Listeria monocytogenes F6900]
gi|293589089|gb|EFF97423.1| shikimate 5-dehydrogenase [Listeria monocytogenes J2818]
gi|345533132|gb|AEO02573.1| shikimate 5-dehydrogenase [Listeria monocytogenes J0161]
Length = 291
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 -ERAKSLASDVMGAARPFEDILNFQP-----EKGAILANATPLGMHP-NTDRVPVSEETL 454
+ + + S A+ F DI N + + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINSKTDCKAQLF-DIENHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|417938182|ref|ZP_12581480.1| shikimate dehydrogenase [Streptococcus infantis SK970]
gi|343391272|gb|EGV03847.1| shikimate dehydrogenase [Streptococcus infantis SK970]
Length = 284
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 145/307 (47%), Gaps = 47/307 (15%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVGAIDLAETVANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+G+ SF ++G+ VL GAGGA +A+ A G V F R+ S+
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILAQAILDGVSQVSV---FVRSASIEK-- 160
Query: 412 MGAARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSEE 452
ARP+ ED + Q +L NAT +GM + +P S
Sbjct: 161 ---ARPYLEKLQHETGFRVDLFALEDHQDLQDSITHADLLVNATSVGMDGISQPIP-SSI 216
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
L D LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E +
Sbjct: 217 VLPDKLLVSDVIYQPFETPFLKWARSQGNHAVNGLGMLLYQAAEAFQLWTGKEMPTEQIW 276
Query: 513 EIVLAKF 519
E++ K+
Sbjct: 277 ELLTQKY 283
>gi|238893051|ref|YP_002917785.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238545367|dbj|BAH61718.1| shikimate 5-dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 292
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 30/307 (9%)
Query: 225 LRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFF 282
+R E I T++ GLI+ P+ HS P +HN F ++ + +Y+ V +LK
Sbjct: 1 MRIFVMAERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVV 60
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
+ + GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD
Sbjct: 61 QGFRAMKLRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGY 118
Query: 343 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---D 398
+ A+ +A G + G+ + GAGGA AL A G + + IF D
Sbjct: 119 MRALSEA-------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRD 165
Query: 399 IDFERAKSLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVS 450
F A+ + + F+ D L + + IL NAT +GM P ++ +
Sbjct: 166 KFFANAEETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLP 225
Query: 451 EET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
+++ LR +V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P +
Sbjct: 226 DDSFLRPDLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVD 285
Query: 510 FMREIVL 516
+++ I+
Sbjct: 286 YIKSILF 292
>gi|255022416|ref|ZP_05294402.1| shikimate 5-dehydrogenase [Listeria monocytogenes FSL J1-208]
gi|422808610|ref|ZP_16857021.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
gi|378752224|gb|EHY62809.1| Shikimate/quinate 5-dehydrogenase I beta [Listeria monocytogenes
FSL J1-208]
Length = 291
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|302392525|ref|YP_003828345.1| shikimate 5-dehydrogenase [Acetohalobium arabaticum DSM 5501]
gi|302204602|gb|ADL13280.1| shikimate 5-dehydrogenase [Acetohalobium arabaticum DSM 5501]
Length = 292
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 156/302 (51%), Gaps = 36/302 (11%)
Query: 231 VEHINADTK-VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 287
++H+N + + + GL PV HS P++HN F ++ + +Y+P V D+LK
Sbjct: 3 LDHLNLEERELVGLFGYPVKHSLSPVMHNTAFSKLDLDYLYLPFEVEPDNLKAAVEGIRG 62
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+ G ++ P+KEAV+ + D+V A+ I AVNTI + G+LIGYNTD
Sbjct: 63 LNLRGVNLTIPHKEAVIPYLDQVSKEAELIGAVNTI--KNEAGELIGYNTDG-------- 112
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKS 406
RG+ G + ++ GAGGA RA+AF G R+ + + F++A+
Sbjct: 113 -----RGFVRSLQEEGFMPQNKNVLIVGAGGAARAVAFQLGLEGVERLYVANRTFKKAED 167
Query: 407 LASDV-----MGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSE-ET 453
L SD+ M +P L + EK +L + TP+GMHP +D PV E E
Sbjct: 168 LVSDIKKGLEMETVQP----LPLKQEKLKKIISGIDLLVDTTPIGMHPESDVEPVIEPEL 223
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
++ +V D VY P +T LLK A+ GA VSG+ M + Q F ++TGK+AP + M E
Sbjct: 224 IQPDMVVSDLVYNPVETSLLKAAKDRGAKTVSGLGMLVHQGAISFEIWTGKKAPVKLMAE 283
Query: 514 IV 515
+
Sbjct: 284 TI 285
>gi|423127377|ref|ZP_17115056.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5250]
gi|376394416|gb|EHT07066.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5250]
Length = 287
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 148/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V ++LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD + A+++A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDGTGYMRALKEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKEISIFNRKDKFFANAE 167
Query: 406 SLASDVMG----AARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + A F+ D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCAIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHIKSILF 287
>gi|406026143|ref|YP_006724975.1| shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
gi|405124632|gb|AFR99392.1| Shikimate 5-dehydrogenase [Lactobacillus buchneri CD034]
Length = 290
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 148/289 (51%), Gaps = 33/289 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I+ TK+FGL++ P HS P++HN +F+ NGIY+ V L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P K V+ DE+ P A+ ++AVNT+I R DG+LIG +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV--------IFDIDFER 403
+ + ++ + GAGGAGRA+ A GA+ V +FD E+
Sbjct: 116 QDDIT---------IDEKVVTVLGAGGAGRAIISAAVDAGAKQVYVFKRTNDLFDARKEQ 166
Query: 404 AKSLASDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---Q 458
+ SDV+ P+ED ++ ++ I+ANAT +GM +PVS+ +
Sbjct: 167 LEGW-SDVV-TVLPYEDEGLIAEAFDESQIIANATNVGM-AGDQSLPVSQSVMNHLTPRH 223
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
+V DA+Y P +T + A+ G+ +G+ M + QA G F +TG+ P
Sbjct: 224 IVSDAIYFPLETPFIHAAKQRGSRTYNGIGMLVNQAAGSFLEWTGQRMP 272
>gi|409351411|ref|ZP_11234133.1| Shikimate dehydrogenase [Lactobacillus equicursoris CIP 110162]
gi|407876775|emb|CCK86191.1| Shikimate dehydrogenase [Lactobacillus equicursoris CIP 110162]
Length = 310
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%), Gaps = 31/298 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ T + GL++ P+ H+ P +HN F + NG Y+ +D+ L + D
Sbjct: 25 LDGHTILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTLDMR 84
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K+ V+ + D++ +Q AVNTI+ G L GY TD
Sbjct: 85 GSNVSMPNKKKVIPYLDKLDKTSQMCDAVNTIVN--DHGVLTGYTTDG------------ 130
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLA-- 408
G+ G + G++ LAGAGGA +A A GA+ + IF+++ ++ +
Sbjct: 131 -MGWLRSLNKDGQDVKGKVITLAGAGGAATPIAVTASLSGAKEIRIFNLNDDKWEQAVKN 189
Query: 409 -------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQ 458
+D + ED +F+ + I +AT +GM+P D+ V + + +
Sbjct: 190 VDTINKETDCVATVHHLEDREDFKKSIAESDIYCDATSVGMNPLQDQTLVDDPSWFHEDM 249
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY PRKT+L++ AE AG I +G+ M + Q F L+TGKE P ++++EI+
Sbjct: 250 VVSDTVYAPRKTKLMEVAEKAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIM 307
>gi|422421064|ref|ZP_16498017.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313639412|gb|EFS04281.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 291
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHERLRKEISESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|374585221|ref|ZP_09658313.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
gi|373874082|gb|EHQ06076.1| shikimate dehydrogenase [Leptonema illini DSM 21528]
Length = 292
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 141/302 (46%), Gaps = 39/302 (12%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFS-TYSSPD 289
++ I + VFG+ PV HS PILHN TF + +NG+YVP VD F
Sbjct: 1 MKGITGQSAVFGIFGNPVSHSISPILHNRTFEKMGFNGVYVPFCVDQTGPFLKKAVLHMG 60
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGKLI-GYNTDCEASITAIE 347
+G SV P+K K D+ L++ A NT+ +R +G+++ +NTD ++ A++
Sbjct: 61 LSGLSVTIPHKLWAAKAADQRDALSELTGAANTLLVRETRNGRILSAHNTDGPGAMRALQ 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRA------LAFGAKSRGA------RVV 395
A+ + L GR V+AG GG+ RA LA G K ++
Sbjct: 121 TAVPD-------------LKGRRVVIAGYGGSARAIVGQLLLASGVKQVAVTGRNMPKIK 167
Query: 396 IFDIDFERAKSLASDVMGAARPF--EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET 453
F F + + D P E +L+++ IL N TPLGM +PV E
Sbjct: 168 AFIRSFTKKRP---DWAAKLIPLKEEALLDYEAH---ILINTTPLGMKGFDLSLPVPESF 221
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP---KEF 510
LR V D VY P T +L A+ A IV G M L QA+ QF LFTG +A + F
Sbjct: 222 LRPGLAVMDIVYRPEMTPILIAAKKNRATIVPGYWMLLYQAVLQFELFTGMKAGPDVENF 281
Query: 511 MR 512
MR
Sbjct: 282 MR 283
>gi|223044396|ref|ZP_03614430.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
gi|222442265|gb|EEE48376.1| shikimate 5-dehydrogenase [Staphylococcus capitis SK14]
Length = 269
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 22/282 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE ++ + DEV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 417
L ++ GAGGA + +A K ++ I + R + D+ A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAIS 165
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
D + E I+ N TP GM N D V ++ L + LV D VY P KT +L +AE
Sbjct: 166 LNDAEKYLDEFD-IVINTTPAGMDKNNDSV-INLRNLSPHTLVSDIVYIPYKTPILLEAE 223
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+ G I +G++MF+ Q F ++TG++ + M+ VL K
Sbjct: 224 SKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|402782448|ref|YP_006637994.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|402543306|gb|AFQ67455.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 287
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F ++ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAYLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 406 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + F+ D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 ETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSILF 287
>gi|315281073|ref|ZP_07869790.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
gi|313615282|gb|EFR88710.1| shikimate 5-dehydrogenase [Listeria marthii FSL S4-120]
Length = 291
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVRGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|257869370|ref|ZP_05649023.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
gi|257803534|gb|EEV32356.1| shikimate 5-dehydrogenase [Enterococcus gallinarum EG2]
Length = 289
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 30/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I T++ L +KP HS P +HN +F + +Y+ VD L + D
Sbjct: 5 ITGHTRLATLFAKPAKHSISPAMHNLSFEDQKVDAVYLAFDVDPESLAASIQSIRQLDLL 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K A + DE+ P A+ I A+NTI+ G LIG+NTD + A+ D
Sbjct: 65 GVNLSMPHKMAAVPLVDELSPAAELIGAINTIVNHK--GHLIGHNTDGIGFMRALGDIEV 122
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
S + G M V+ GAGGA A+ A G + +F+ + E + S
Sbjct: 123 ------------SIIGGTMTVI-GAGGAATAIISQAALDGVETIHVFNRNDEFYPVIESK 169
Query: 411 VMGAARPF-----------EDILNFQPEKGAILANATPLGMHPNTDRVPVSEE-TLRDYQ 458
+ A + L ++ +L NAT +GM P D P+ + LR+
Sbjct: 170 LQQIAAATTCNITLGDLDDQQALGLAIKESQLLVNATGVGMKPQEDASPLKDRGMLRESL 229
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
V+D +Y PR+TRLL+DA+AAGA +G+ M L Q F L+T K+ P E ++ ++
Sbjct: 230 AVYDVIYNPRETRLLRDAKAAGAKTANGLSMLLYQGAAAFELWTDKKMPIEKVKTLI 286
>gi|422417941|ref|ZP_16494896.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
gi|313634787|gb|EFS01220.1| shikimate 5-dehydrogenase [Listeria seeligeri FSL N1-067]
Length = 291
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGRTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 QKTVEKINS-KTDCKAQLFDIEDHERLRKEISESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|296133259|ref|YP_003640506.1| shikimate 5-dehydrogenase [Thermincola potens JR]
gi|296031837|gb|ADG82605.1| shikimate 5-dehydrogenase [Thermincola potens JR]
Length = 293
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 27/295 (9%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 287
K++ I T V G+ PV HS P++HN F+ + +YVP V + L + S +
Sbjct: 4 KIQRITGKTGVIGIFGFPVEHSFSPVMHNAAFQAGGLDYVYVPFEVPPERLAEAVSAIRA 63
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
G +V P+KE V+++ D + A+ I AVNTI+R S +L GYNTD + ++E
Sbjct: 64 LKLRGVNVTIPHKERVVQYLDSLSEEARLIGAVNTIVR--SGDELKGYNTDAAGFLRSLE 121
Query: 348 D---AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERA 404
+ A++ A + LAGA G +V+ + + +A
Sbjct: 122 EKKVAVQGANVLLLGAGGAARAVAVQLALAGARRVG-------------IVVRNSGWRKA 168
Query: 405 KSLASDVMGAARP------FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDY 457
+ +A V G + FE+ + EKG I+ N TP+GMHPN +P +T+
Sbjct: 169 EGIAEIVAGHSCAKSTVALFENAQDLIAEKGNIIINCTPVGMHPNVMEMPPFKLDTIPAD 228
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+V D +Y P +T LK A+A G VSG M L Q + L+T ++AP + MR
Sbjct: 229 SVVCDLIYNPAETLFLKTAKARGLKTVSGSGMLLYQGTLAYELWTRQQAPVDIMR 283
>gi|16799568|ref|NP_469836.1| shikimate 5-dehydrogenase [Listeria innocua Clip11262]
gi|423099588|ref|ZP_17087295.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
gi|24211466|sp|Q92EG7.1|AROE_LISIN RecName: Full=Shikimate dehydrogenase
gi|16412933|emb|CAC95725.1| lin0493 [Listeria innocua Clip11262]
gi|370793944|gb|EHN61747.1| shikimate dehydrogenase [Listeria innocua ATCC 33091]
Length = 291
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 -ERAKSLASDVMGAARPF--EDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETLR 455
+ + + + A+ F ED + E + I NAT +GM P + + S + LR
Sbjct: 171 EKTVEKINTKTNCKAQLFDMEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 230
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI+
Sbjct: 231 PELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 290
Query: 516 L 516
Sbjct: 291 F 291
>gi|145577897|gb|ABP82667.1| shikimate 5-dehydrogenase [Bacillus mycoides]
Length = 238
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + + + ++AK L + L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
+ I+ T +GMHP P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|448419716|ref|ZP_21580560.1| shikimate 5-dehydrogenase [Halosarcina pallida JCM 14848]
gi|445674630|gb|ELZ27167.1| shikimate 5-dehydrogenase [Halosarcina pallida JCM 14848]
Length = 266
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 140/283 (49%), Gaps = 21/283 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 296
+VFGL+ PVGHS P +H + V+ + YV +DL + AG +V
Sbjct: 2 QVFGLVGNPVGHSLSPPMHEAAYDRVDMDARYVTFEPSPEDLSAAVEGAEALGIAGLNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++ E LA I AVNT+ DG GYNTD G +
Sbjct: 62 IPFKREMVDLV-EPDELAARIGAVNTVGF--GDGPPRGYNTDAA-------------GVR 105
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
A PL GR V+ GAGGAGRA +F GA V + + ERA SLA+DV GA
Sbjct: 106 RSFAHHDVPLDGRSAVVVGAGGAGRAASFALADAGASVHVANRTTERATSLAADVPGATG 165
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
D L+ + +L NAT +GM +D PV E L D V DAVY P +TRLL++A
Sbjct: 166 GGLDTLDGLADAD-LLVNATSVGME--SDETPVPAERLHDGLAVLDAVYAPVETRLLREA 222
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AAGA + G M L Q + F +TG++AP + M + + A
Sbjct: 223 AAAGATTIDGAWMLLFQGVEAFERWTGRDAPVDAMNDALRANL 265
>gi|418096456|ref|ZP_12733568.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
gi|353769141|gb|EHD49662.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA16531]
Length = 506
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 210/467 (44%), Gaps = 73/467 (15%)
Query: 89 EALHLAEDLGA----DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
E +HL +++ DY+DFE ++ + ++S + ETP E++
Sbjct: 76 EYIHLIKEVAQFYQPDYIDFEYYSYKDV----FEEMLDFPNLVLSYHNFQETP--ENMME 129
Query: 145 LVSRMQATGADIIKLVF------SVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLL 198
++S + ++K+ V D+ R F+ L+ Q + S+G+ G VS++
Sbjct: 130 ILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQ-EYVTISMGKVGKVSRIT 188
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HINADTKVFGLISKPVGHSKGPILH 257
+ + + SL G ++ S++++ + ++ T++ +++ P+ HS P +H
Sbjct: 189 ADVTGSSWSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIH 248
Query: 258 NPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
N F NG YV ++ DL + + G ++ PYKE V+ + D++ A+
Sbjct: 249 NRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEAR 308
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNT++ +G LIGYNTD +G+ SF ++G+ L G
Sbjct: 309 LIGAVNTVVNE--NGNLIGYNTDG-------------KGFFKCLPSFT--ISGKKMTLLG 351
Query: 376 AGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP-------- 426
AGGA +++ A G +++ +F + S M RP+ D L Q
Sbjct: 352 AGGAAKSILAQAILDGVSQISVF---------VRSVSMEKTRPYLDKLQEQTGFKVDLCA 402
Query: 427 -----------EKGAILANATPLGMHPNTDRVP---VSEETLRDYQLVFDAVYTPRKTRL 472
+ +L NAT +GM + VP V ETL LV D +Y P +T
Sbjct: 403 LEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLPETL----LVADIIYQPFETPF 458
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 459 LKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 505
>gi|258563398|ref|XP_002582444.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
gi|327507674|sp|C4JYG6.1|ARO1_UNCRE RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|237907951|gb|EEP82352.1| pentafunctional AROM polypeptide [Uncinocarpus reesii 1704]
Length = 1580
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 221/521 (42%), Gaps = 79/521 (15%)
Query: 36 GADVVEIRLDCI-----NNFQPGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + ++ P D + I+ ++ +P++ R K GG + D H
Sbjct: 1067 GSDAVELRVDLLVDPSSSSEMPSVDYVAEQISILRSRVSVPLVFTIRTKSQGGRFPDDAH 1126
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D G
Sbjct: 1127 NAALDLYRLAIRMGSEFVDLEVTFPEYVL--RAVTEMKGVSKIIASHHDVANRLSWRNGS 1184
Query: 145 LVS--RMQATGADIIKLVFSVNDITE-IA----RIFQLLSHCQVPIIAYSVGERGLVSQL 197
DIIKLV + + + IA +I+ +H +P+IA ++GERG +S++
Sbjct: 1185 WTQFYNKALQYGDIIKLVGIASQLDDNIALREFKIWAKKAH-DIPVIAINMGERGRLSRI 1243
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPI 255
L NG + S P P S ++ + + ++K F ++ KP+ S+ P
Sbjct: 1244 L----NGFMTPVSHPKLPFKAAPGQLSAKEIREGLSLMGEIESKKFAIVGKPISASRSPA 1299
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
LHN F V +Y + DD++ +PDF G S+ P K +M DE+ P A+
Sbjct: 1300 LHNALFADVGLPHVYGRLETDDVQNVKDLIHAPDFGGASITIPLKLDIMPLLDEIAPEAK 1359
Query: 316 AIAAVNTII---RRPSDGK----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D K LIGYNTD + + + G ++ P G
Sbjct: 1360 VIGAVNTIVPAPREPGDVKKGPRLIGYNTDWQGMVQCL-----RHGGAVSPSTSNDPAPG 1414
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
++ G GG RA S G + R++S +D+ A F N Q
Sbjct: 1415 ---LVIGGGGTARAAIHALHSMGYSPIYL---VGRSESKLNDM---ALSFPATYNLQ--- 1462
Query: 429 GAILANATPLGMHPNT--------------------------DRVPVSEETLRDYQLVFD 462
IL +A L + P+ R+ + L +++ +
Sbjct: 1463 --ILKDAESLEILPSVAIGTIPGDQPIDPSMREVLCRLFEMAARIDAELKELAPKRVLLE 1520
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P T L + A G + G+E + Q + QF L+TG
Sbjct: 1521 MAYKPTVTPLSQLASDCGWATIPGLEALVGQGVYQFQLWTG 1561
>gi|408410402|ref|ZP_11181620.1| Shikimate dehydrogenase [Lactobacillus sp. 66c]
gi|407875433|emb|CCK83426.1| Shikimate dehydrogenase [Lactobacillus sp. 66c]
Length = 310
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%), Gaps = 31/298 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ T + GL++ P+ H+ P +HN F + NG Y+ +D+ L + D
Sbjct: 25 LDGHTILVGLMAYPIRHTMSPTMHNNAFAKLGLNGAYLCFEIDNEKLPGAIDAIRTLDMR 84
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K+ V+ + D++ +Q AVNTI+ G L GY TD
Sbjct: 85 GSNVSMPNKKKVIPYLDKLDKTSQMCDAVNTIVN--DHGVLTGYTTDG------------ 130
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLA-- 408
G+ G + G++ LAGAGGA +A A GA+ + IF+++ ++ +
Sbjct: 131 -MGWLRSLNKDGQDVKGKVITLAGAGGAATPIAVTASLSGAKEIRIFNLNDDKWEQAVKN 189
Query: 409 -------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQ 458
+D + ED +F+ + I +AT +GM+P D+ V + + +
Sbjct: 190 VDTINKETDCVATVHHLEDREDFKKSIAESDIYCDATSVGMNPLQDQTLVDDPSWFHEDM 249
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY PRKT+L++ AE AG I +G+ M + Q F L+TGKE P ++++EI+
Sbjct: 250 VVSDTVYAPRKTKLMEVAERAGVKHIYNGIGMMIEQGAAAFKLWTGKEMPTDYIQEIM 307
>gi|402309392|ref|ZP_10828385.1| shikimate dehydrogenase [Eubacterium sp. AS15]
gi|400372359|gb|EJP25303.1| shikimate dehydrogenase [Eubacterium sp. AS15]
Length = 288
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 143/293 (48%), Gaps = 27/293 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GLI P+ HS+ P +HN F + Y+ + V + LK+ +
Sbjct: 4 RIQGTTRLIGLIGTPIKHSRSPHMHNSAFEKTGQDYAYLCLEVGKEGLKQALDALKLFNA 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ FP K+ V+++ DE+ A+ I +VNTI K+ GYNTD + +IE+
Sbjct: 64 KGSNITFPNKQEVIQYLDEISEDAKIIGSVNTITIDDETKKIKGYNTDGRGFVASIEE-- 121
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 409
++ YK G VL G GGAGRA+A G ++I DID E +
Sbjct: 122 RKIDYK-----------GNKVVLLGVGGAGRAIAIQLAYEGVGELIIKDID-EALMNEVR 169
Query: 410 DVMGAARPF--------EDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQ-L 459
+ + + P E+ L + + +L NATPLGM D + S + L D +
Sbjct: 170 ETINKSIPNCKVKLINDEETLKEELKDAVLLINATPLGMKGRVDMCAITSSDVLGDTKAF 229
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
V+D VY PR+T+L+K A+ G +G+ M L Q + ++ G + P +++R
Sbjct: 230 VYDIVYEPRETKLMKYAKEKGLQTTNGINMMLWQGALAYKIWLGVDMPIDYVR 282
>gi|448360171|ref|ZP_21548813.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
gi|445640121|gb|ELY93211.1| shikimate 5-dehydrogenase [Natrialba chahannaoensis JCM 10990]
Length = 278
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 141/292 (48%), Gaps = 26/292 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
VFGL+ PVGHS+ P +H + + Y+ YV D DL+ + + G +V
Sbjct: 2 NVFGLLGNPVGHSRSPPMHEAAYDELTYDARYVTFEPDPSDLEAAVAGADALGITGLNVT 61
Query: 297 FPYKEAVMKF-CDEVHPLAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAIEDA 349
P+K+ V++ E LA I AVNTI P S G+ G+NTD ++ A+ +
Sbjct: 62 IPFKQDVLELDLVEADELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRALRE- 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS 409
+AG V+ GAGGAGRA++F GA V I + A LA+
Sbjct: 121 ------------HDVTVAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHELAA 168
Query: 410 DVMGAARP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
DV A E +L IL NAT +GM D PV + L V DAVY P
Sbjct: 169 DVPDATGHGLDEGVLESLLADADILVNATSVGME--ADETPVPADALHGDLAVMDAVYQP 226
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+TRLL+DA AGA V G M L Q + F L+TG+EAP + M E + A+
Sbjct: 227 LETRLLRDATDAGATTVDGAWMLLYQGVEAFELWTGREAPVDVMNEALRAQL 278
>gi|15678270|ref|NP_275385.1| shikimate 5-dehydrogenase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621291|gb|AAB84748.1| shikimate 5-dehydrogenase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 260
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 133/267 (49%), Gaps = 25/267 (9%)
Query: 256 LHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
+HN FR + + IYVP V ++LK + G +V P+KEAV+++ D++H
Sbjct: 1 MHNAAFRSLGMDWIYVPFPVKPENLKAAVEGLRALGVEGVNVTIPHKEAVLEYIDDIHGT 60
Query: 314 AQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVL 373
A I AVNT+ + DG + GYNTD + A+E+ G G F L
Sbjct: 61 AALIGAVNTL--KFDDGTVRGYNTDASGCLRALEEVTSVEGSSVLILGAGGAARACAFQL 118
Query: 374 AGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE------DILNFQPE 427
A G + + I + E+A+ LA D M FE +++ +
Sbjct: 119 AEKGASD-------------ITILNRTPEKARLLAED-MADKLGFEASYGGYELIQGSVK 164
Query: 428 KGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSG 486
IL + TP+GMHP+TD P V E + + +V D VY P++T LL++AE A AI VSG
Sbjct: 165 SADILIDTTPVGMHPHTDDRPLVGAELMHEGLVVHDLVYNPQRTVLLREAERASAIPVSG 224
Query: 487 VEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+ M L Q + F ++TG++ P + M +
Sbjct: 225 IRMLLYQGVEAFRIWTGRDPPLDVMED 251
>gi|392409696|ref|YP_006446303.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
gi|390622832|gb|AFM24039.1| shikimate dehydrogenase [Desulfomonile tiedjei DSM 6799]
Length = 280
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 144/308 (46%), Gaps = 54/308 (17%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV------DDLKKFFSTYSS 287
+ T + G+I PV HS P +HN FR +N + YVP+ V D LK +
Sbjct: 2 VKGTTNLVGIIGFPVSHSLSPTMHNAAFRALNMDWKYVPLSVRPQNVPDALKGLIAL--- 58
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
F G +V P+KE V + +++ AQ I AVNTI+ + + L G+NTD
Sbjct: 59 -GFRGANVTVPHKEKVTPYLNDISADAQQIGAVNTILVQ--EDTLSGFNTDWS------- 108
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFD--------- 398
G+ N G +G ++ G+GG+ RA+++ RGA + I
Sbjct: 109 ------GFLNHLTEIGFDPSGAKALILGSGGSARAVSYSLCQRGADISILSRNTGTAGLI 162
Query: 399 IDFERAKSL--------ASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVS 450
ID ++S A + +AR F+ ++ N TPLGM P + P
Sbjct: 163 IDELSSQSAQNRIGSISAESLRDSARDFD-----------LVVNTTPLGMTPLEELSPWP 211
Query: 451 EET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
+ L +D VY P KTR L+ AE +GA+ V+G+ M + QA F ++T +EAP
Sbjct: 212 HDIGFPRRALAYDLVYNPAKTRFLEIAEDSGALAVNGLGMLVHQAAEAFKIWTDREAPVH 271
Query: 510 FMREIVLA 517
M+E +L+
Sbjct: 272 VMKEAILS 279
>gi|418120030|ref|ZP_12756981.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|418198134|ref|ZP_12834594.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
gi|353789143|gb|EHD69539.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA18523]
gi|353862772|gb|EHE42702.1| 3-dehydroquinate dehydratase, type I [Streptococcus pneumoniae
GA47778]
Length = 506
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 209/464 (45%), Gaps = 67/464 (14%)
Query: 89 EALHLAEDLGA----DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
E +HL +++ DY+DFE ++ + ++S + ETP E++
Sbjct: 76 EYIHLIKEVAQFYQPDYIDFEYYSYKDV----FEEMLDFPNLVLSYHNFQETP--ENMME 129
Query: 145 LVSRMQATGADIIKLVF------SVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQLL 198
++S + ++K+ V D+ R F+ L+ Q + S+G+ G VS++
Sbjct: 130 ILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQ-EYVTISMGKVGKVSRIT 188
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE-HINADTKVFGLISKPVGHSKGPILH 257
+ + + SL G ++ S++++ + ++ T++ +++ P+ HS P +H
Sbjct: 189 ADVTGSSWSFASLDEVSAPGQISLASMKKSGRFWMKLDGYTRLAAVVANPIKHSISPFIH 248
Query: 258 NPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
N F NG YV ++ DL + + G ++ PYKE V+ + D++ A+
Sbjct: 249 NRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEAR 308
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNT++ +G LIGYNTD +G+ SF ++G+ L G
Sbjct: 309 LIGAVNTVVNE--NGNLIGYNTDG-------------KGFFKCLPSF--TISGKKMTLLG 351
Query: 376 AGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPE------- 427
AGGA +++ A G +++ +F + S M RP+ D L Q
Sbjct: 352 AGGAAKSILAQAILDGVSQISVF---------VRSVSMEKTRPYLDKLQEQTGFKVDLYA 402
Query: 428 ------------KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ +L NAT +GM + VP S L + LV D +Y P +T LK
Sbjct: 403 LENVSELQARIVESDLLVNATSVGMDGQSSPVPESI-NLPETILVADIIYQPFETPFLKW 461
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 462 ARSQGKPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 505
>gi|37522847|ref|NP_926224.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
gi|35213849|dbj|BAC91219.1| shikimate 5-dehydrogenase [Gloeobacter violaceus PCC 7421]
Length = 285
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 137/288 (47%), Gaps = 26/288 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ GL+ PVGHS P++HN + + +YVP+ V DL + + F
Sbjct: 7 IRGTTRLLGLLGYPVGHSLSPVMHNAALARLGLDLVYVPLPVAPADLPQAVAGLRRAGFV 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ D + P A+ AVNT +R +DG L G NTD E + IE
Sbjct: 67 GFNVTIPHKQAIVPLLDTLTPEAKGAGAVNT-VRVETDGSLTGTNTDIEGFMGPIETV-- 123
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
P G +L G GG+ A+A G G R+ + D + + S
Sbjct: 124 -------------PFQGAATIL-GCGGSALAVALGCAQLGFTRIHVVGRDPAKLAAFKSH 169
Query: 411 VMGAARP----FEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVY 465
+ AA +E + + P G +L N TP+GM P T+ P+ + L V+D +Y
Sbjct: 170 LHPAATVEIDLWEQLESLLPGTG-LLINTTPVGMIPATEASPLEDLGALPLKACVYDLIY 228
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
PR TRLL+ A A G+ M + QA F +TG + P + M +
Sbjct: 229 RPRPTRLLQLAVARSLQTFDGLGMLVGQAEAAFYFWTGCKPPTQLMLQ 276
>gi|302390016|ref|YP_003825837.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
gi|302200644|gb|ADL08214.1| shikimate 5-dehydrogenase [Thermosediminibacter oceani DSM 16646]
Length = 288
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 147/303 (48%), Gaps = 35/303 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I DTKV G+I PV HS P++HN F + + +YVP V ++LK+ + +
Sbjct: 2 EIKGDTKVLGIIGYPVDHSLSPVIHNAAFEELKLSCVYVPFPVKPENLKEAIEGIRALNV 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+K VM + DE+ A I AVNTI+ + G+L+G+NTD + +DA+
Sbjct: 62 GGVNVTIPHKVKVMNYLDEISKEAAVIGAVNTIVNK--GGRLVGFNTDA----SGFKDAL 115
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI-----------FDI 399
Y+ G L G+ ++ GAGGA RA+ GA +I +
Sbjct: 116 ----YRIA----GVDLTGKRVLVLGAGGAARAVVGQCLLSGASSIIVSNRTKTRAKELEF 167
Query: 400 DFERAK--SLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTD-RVPVSEETLRD 456
F++A S S + +P+ + + I+AN G + + + + L
Sbjct: 168 HFKKAGMGSKISIIEWGKQPWRRV----ASRVDIIANTAGAGQKDDLGLELEIPWDDLDK 223
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ FDAVY TRLLK+A++ G + V G M L Q + F L+TG +AP E M E L
Sbjct: 224 NTVFFDAVYGSGSTRLLKEAQSRGHLTVPGKYMLLYQGVEAFKLWTGLDAPLEVM-EAAL 282
Query: 517 AKF 519
+F
Sbjct: 283 DRF 285
>gi|296813541|ref|XP_002847108.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
gi|327507651|sp|C5FQ73.1|ARO1_ARTOC RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|238842364|gb|EEQ32026.1| pentafunctional AROM polypeptide [Arthroderma otae CBS 113480]
Length = 1571
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 214/511 (41%), Gaps = 49/511 (9%)
Query: 24 QVLSNMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRP 73
Q+ +++ +A G+D +E+R+D + + + + + + P++ R
Sbjct: 1064 QLSADILRAATFGSDAIELRVDLLKDPSSTSGVPSVGYVAEQMSFLRSHASQPLIFTIRT 1123
Query: 74 KWAGGLYEGDE-HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K GG + D K LE LA +G+++VD EL +++L + G I++ +
Sbjct: 1124 KAQGGQFPDDAVDKALELYKLAIRMGSEFVDLELSFPNDLL--HAVTEMKGFSKIIASHH 1181
Query: 133 DCETPSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAY 186
D + G + DIIKL+ + + Q S + VPIIA
Sbjct: 1182 DVNSQLSWSNGSWIQYYNKALQHGDIIKLIGVAKTFEDNMALQQFKSWAEKSYPVPIIAI 1241
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISK 246
++G +G +S++L+ +F + + +L G + + +RQ + D K F L K
Sbjct: 1242 NMGNKGRLSRILN-RFMTPVSHPALPFKAAPGQVSAKDIRQALTLMG-ELDAKKFALFGK 1299
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
P+ S+ P LHN F + Y + D + S DF G SV P KE +M
Sbjct: 1300 PISASRSPALHNALFTQAGFPHDYGLLETDKAENVEKFIRSDDFGGASVTIPLKEQIMGL 1359
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDG---KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ G +LIGYNTD + ++DA G
Sbjct: 1360 LDEISPEAKIIGAVNTIVPITVSGRPPRLIGYNTDWQGMARCLKDA--------GAICSN 1411
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
+ G + G+GG RA + S G + R S S + + +I
Sbjct: 1412 N---GESALTIGSGGTARAAIYSLHSMGYSPIYL---VGRTPSNLSKLASSFPAEYNIQV 1465
Query: 424 FQPEKGAILANATPLGMHPNTDRV--PVSE------ETLRDYQ---LVFDAVYTPRKTRL 472
Q K A + P + P+ E E +D ++ D Y P T +
Sbjct: 1466 VQDIKSVQAAPKVAISTIPGDQELENPLPELITQIMEKGQDSSRECILLDMAYKPDVTTM 1525
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+ A AG I+ G+E+ + Q I QF +TG
Sbjct: 1526 ARLASPAGWKIIKGLEVLVAQGIYQFEHWTG 1556
>gi|315040954|ref|XP_003169854.1| pentafunctional AROM polypeptide [Arthroderma gypseum CBS 118893]
gi|311345816|gb|EFR05019.1| pentafunctional AROM polypeptide [Arthroderma gypseum CBS 118893]
Length = 1571
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 221/536 (41%), Gaps = 72/536 (13%)
Query: 24 QVLSNMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRP 73
Q N+ QA + G+D VE+R+D + + + + + ++ LP++ R
Sbjct: 1063 QPCGNILQAASFGSDAVELRVDLLKDPSSTSGIPSVNYVAEQISFLRSQVSLPLIFTIRT 1122
Query: 74 KWAGGLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNL 132
K GGL+ + L+ LA +G++++D E+ N+L + G I++ +
Sbjct: 1123 KAQGGLFPDNAFDEALGLYKLAIRMGSEFIDLEISFPDNLL--HVVTEMKGFSKIIASHH 1180
Query: 133 DCETPSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAY 186
D G + D+IKL+ + + + Q S + VPIIA
Sbjct: 1181 DVNGQLSWSNGSWIQYYNKALQHGDVIKLIGVAKSLDDNLSLKQFKSWAEKSYPVPIIAI 1240
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGL 243
++G++G +S++L NG + S P P + + +RQ + D K F L
Sbjct: 1241 NMGDKGRLSRIL----NGFMTPVSHPALPFKAAPGQISAKEIRQALTLMG-ELDAKKFAL 1295
Query: 244 ISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAV 303
KP+ S+ P LHN F + Y + DD+ S +F G SV P KE +
Sbjct: 1296 FGKPISASRSPALHNTLFAQAGFPHEYGRLETDDVGDVKEFIRSEEFGGASVTIPLKEHI 1355
Query: 304 MKFCDEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGT 359
M+ DE+ P A+ I AVNTI+ +G KL+G+NTD + ++DA K +
Sbjct: 1356 MELLDEISPEAKIIGAVNTIVPAFEEGKKSRKLVGFNTDWQGMARCLKDAGAMYLKKGES 1415
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFE 419
A ++ G+GG RA + S G + +++ F
Sbjct: 1416 A-----------LIIGSGGTARAAIYSLHSMGYSPIYL------VGRTPANLAKLGSSFP 1458
Query: 420 DILNFQPEKGAILANATPLGMHPNT--DRVPVSEET---LRDY--------------QLV 460
N Q ++ + + + P +P +E LRD ++
Sbjct: 1459 AGYNVQ-----VVEDIKSVKIAPKVAISTIPGDQEIVNPLRDLITLIMNKGQEDSAECII 1513
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
D Y P T + + A AG IV G+E+ + Q + QF +TG E R V+
Sbjct: 1514 LDMAYKPDVTAVAQLASPAGWKIVKGLEVLVAQGVYQFEHWTGLTPVYEDARAAVM 1569
>gi|419761794|ref|ZP_14288045.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397745335|gb|EJK92542.1| shikimate dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 287
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V +LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRAMK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K + ++ D++ P AQ + AVNT++ DG L G+ TD + A+ +A
Sbjct: 63 LRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DDGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 121 -------------GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAE 167
Query: 406 SLASDVMGAA----RPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + F+ D L + + IL NAT +GM P ++ + +++ L
Sbjct: 168 ETVAKIRHNTDCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLLP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGK+ P ++++ I+
Sbjct: 228 DLIVSDVVYNPRKTHLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSILF 287
>gi|331700628|ref|YP_004397587.1| shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
gi|329127971|gb|AEB72524.1| Shikimate dehydrogenase [Lactobacillus buchneri NRRL B-30929]
Length = 290
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 146/291 (50%), Gaps = 37/291 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I+ TK+FGL++ P HS P++HN +F+ NGIY+ V L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFQVTGINGIYLAFDVTSAGLADSLAAMRAMHIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P K V+ DE+ P A+ ++AVNT+I R DG+LIG +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVLPLLDEITPRAERLSAVNTVINR--DGRLIGDSTDGQGWV----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL---- 407
+ + ++ + GAGGAGRA+ A GA+ V F+R L
Sbjct: 116 QDDMT---------IDEKVVTVLGAGGAGRAIISAAVDAGAKQVYV---FKRTNDLFEAR 163
Query: 408 ------ASDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-- 457
SDV+ P+ED ++ ++ I+ANAT +GM +PVS+ +
Sbjct: 164 KEQLEGWSDVV-TVLPYEDEGLIAEAFDESQIIANATNVGM-AGDQSLPVSQSVMNHLTP 221
Query: 458 -QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
+V DA+Y P +T + A+ G+ +G+ M + QA G F +TG+ P
Sbjct: 222 QHIVSDAIYFPLETPFIHAAKQRGSRTYNGIGMLVNQAAGSFLEWTGQRMP 272
>gi|347753134|ref|YP_004860699.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
gi|347585652|gb|AEP01919.1| Shikimate dehydrogenase [Bacillus coagulans 36D1]
Length = 280
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 138/286 (48%), Gaps = 28/286 (9%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
++G+I P+ HS P +HN FR + + Y V ++L+ + + AGF+V
Sbjct: 4 LYGVIGDPIAHSLSPAMHNEAFRALGIDADYHAFHVTPENLEAAVNGMKAIGVAGFNVTI 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+A+M + DE+ LA+ I AVNT++R P GYNTD + A+++
Sbjct: 64 PHKQAIMPYLDEIDLLAETIGAVNTVVRTPHG--WAGYNTDGPGFMQALKE--------- 112
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
G ++G ++ GAGGA RA+ + GA V D ++ M P
Sbjct: 113 ---ESGRVISGEKVLVIGAGGAARAIYYTLCREGAVTV----DLCNRTVKKAEEMRDESP 165
Query: 418 F---EDILNF-----QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F +L Q + ++ T +GMHPNTD P+S L V D +Y P +
Sbjct: 166 FPCPSKVLTLKEAEEQLGEYTLIVQTTSIGMHPNTDAQPLSVRNLNPDAFVSDIIYNPFE 225
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
T+ LK+A+ GA + +G+ MF+ Q F +TG + M+ +V
Sbjct: 226 TKFLKEAKKRGARVQNGLGMFIYQGAIAFEKWTGVKPDTRKMKNVV 271
>gi|430852566|ref|ZP_19470297.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
gi|430541400|gb|ELA81545.1| shikimate 5-dehydrogenase [Enterococcus faecium E1258]
Length = 284
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+T LLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETCLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|314933766|ref|ZP_07841131.1| shikimate dehydrogenase [Staphylococcus caprae C87]
gi|313653916|gb|EFS17673.1| shikimate dehydrogenase [Staphylococcus caprae C87]
Length = 269
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 22/282 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFLLLRDIITEKKLSGFNVTIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE ++ + DEV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLDEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 417
L ++ GAGGA + +A K ++ I + R + D+ A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAIS 165
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
D + E I+ N TP GM N D V ++ L + LV D VY P KT +L +AE
Sbjct: 166 LNDAEKYLDEFD-IVINTTPAGMDKNNDSV-INLRNLSPHTLVSDIVYIPYKTPILLEAE 223
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+ G I +G++MF+ Q F ++TG++ + M+ VL K
Sbjct: 224 SKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|291522732|emb|CBK81025.1| shikimate dehydrogenase [Coprococcus catus GD/7]
Length = 289
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 30/297 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I T + GL+ PV HS P++HN +FR + + Y+ V D+LK
Sbjct: 3 DRITGHTVLTGLLGSPVAHSISPMMHNESFRQLGLDYAYLAFDVGTDNLKTAVEGLKVLG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF++ P K + +CD++ P A+ I AVNT++ +G L G+ TD + A DA
Sbjct: 63 VRGFNLTMPDKNLMCTYCDKLSPAAELIGAVNTVVN--DNGVLTGHTTDGIGYMEAARDA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK 405
G L G+ L G GGA A+ A G + + +F+I + R +
Sbjct: 121 -------------GYDLTGKTMTLLGGGGAATAICVQAALDGLKEIRVFNIKDQFYGRLE 167
Query: 406 SLASDVMGAAR---PFEDILNFQP-----EKGAILANATPLGMHPNTDRVPVSE-ETLRD 456
L +++ D+ + + E IL N T +GM PNTD + + + R
Sbjct: 168 KLTANITAKTSCKVTLHDLADERALYDSIETSDILTNGTSVGMAPNTDACLIKDTDVFRK 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+V D +Y P +T+LLK A G +G+ M L Q F ++TG++ P + ++E
Sbjct: 228 ELIVSDVIYNPEQTKLLKLASEKGCPTFNGLYMLLYQGAAAFKIWTGQDMPVDIIKE 284
>gi|375082963|ref|ZP_09730003.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
gi|374742310|gb|EHR78708.1| shikimate 5-dehydrogenase [Thermococcus litoralis DSM 5473]
Length = 272
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 150/281 (53%), Gaps = 23/281 (8%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAG 292
+A+T+++G+I PV HS P++HN F+ + N IY+ V + L + +G
Sbjct: 3 DAETRLYGVIGFPVRHSLSPVMHNAAFKALGINAIYLAFEVPPERLGDAMEGVRALGISG 62
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V P+KEAV+ F D + + I +VNT++ R GKL G+ TD + A+E AI+
Sbjct: 63 LNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNR--KGKLEGHTTDGLGARRALERAIE- 119
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-DV 411
L GR ++ GAGGAG+A+A+ S+ VV+ + E+AK+L +
Sbjct: 120 -------------LGGRRILIIGAGGAGKAIAY-ELSKDNEVVVLNRTPEKAKALERFGI 165
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
MG A E++ + E +L NAT +GM N+ PV E LR +V D VY P KTR
Sbjct: 166 MGEALNRENLGKYL-EWAEVLINATSVGM--NSWETPVPGEMLRKDLVVMDIVYKPLKTR 222
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
LL +AE G V G+ M + Q I F L+TG + + MR
Sbjct: 223 LLTEAELMGCKTVDGLWMLVYQGIESFKLWTGFKPDEGLMR 263
>gi|227498944|ref|ZP_03929083.1| shikimate dehydrogenase [Acidaminococcus sp. D21]
gi|352683445|ref|YP_004895428.1| shikimate dehydrogenase [Acidaminococcus intestini RyC-MR95]
gi|226904395|gb|EEH90313.1| shikimate dehydrogenase [Acidaminococcus sp. D21]
gi|350278098|gb|AEQ21288.1| shikimate dehydrogenase [Acidaminococcus intestini RyC-MR95]
Length = 287
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 146/294 (49%), Gaps = 26/294 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ +TK+ L+ P+ S + N + N +Y D+ L + +FA
Sbjct: 4 VDINTKMITLLGLPLTQSFAARMQNKGYEAAGLNMVYFYTETDNEHLGDIVNGLRYMNFA 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K V+++ DE+ PL Q + + NT+++ P +GKLIGYNTD TA+
Sbjct: 64 GFAVTKPNKVKVLEYLDELDPLCQKMGSSNTVVKTP-EGKLIGYNTDGVGFYTAL----- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER-AKSLASD 410
T G + +F G GGAGRA+ GAR + FE AKSL D
Sbjct: 118 -------TEEAGVKVDQCVFFCFGGGGAGRAMCSILAYHGARKIYITDKFEGCAKSLVDD 170
Query: 411 VMGAARPFEDILNFQP-------EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
+ + F + F P ++ NA+ +GM + P+ +E ++ QL FDA
Sbjct: 171 I---NKNFAPVAEFVPYGDFSKLSACDVVLNASGVGMGRSIGETPLPKEYMKPEQLYFDA 227
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
Y P KT+ L DAEA G I++G+ M L Q Q L+TGK+AP E MRE +LA
Sbjct: 228 CYNPAKTQFLLDAEAKGCRILNGLGMSLYQGAAQIELWTGKKAPVEAMREELLA 281
>gi|425054313|ref|ZP_18457820.1| shikimate dehydrogenase [Enterococcus faecium 505]
gi|403036076|gb|EJY47444.1| shikimate dehydrogenase [Enterococcus faecium 505]
Length = 284
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F + + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGKTKLAGLFADPASHSLSPLMHNTAFEANDIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIEKKKMTLLGAGGASKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + + L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTDQLRKDLKESCLLVNATDIGMGKKINQSPLLDINMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYEPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|390935057|ref|YP_006392562.1| shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570558|gb|AFK86963.1| Shikimate dehydrogenase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 283
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 26/287 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN+ T +FG+I P+GHS P++HN F ++++N +YV V +DLK +
Sbjct: 3 INSKTGIFGIIGHPIGHSLSPLIHNNAFENLDFNSVYVSFDVKQEDLKDAIMGVKALGIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE+V+K+ D + A+ I AVNTI R + G L GYNTD +T +++K
Sbjct: 63 GLNVTVPHKESVIKYLDRISDEAKLIGAVNTI--RNNAGLLEGYNTD----VTGFMESLK 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS- 409
E + G+ V+ GAGGA +A+A G GA+ + + + ++A L+
Sbjct: 117 EHNV---------DVEGKNAVILGAGGAAKAVATGLALLGAKSIYVCNRSIDKANELSIH 167
Query: 410 -----DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
++ + D LN E +L NAT +GMHPN D P+ E+ + + V+D +
Sbjct: 168 IENNFNIKSRGIAYND-LNMLDEID-MLINATSVGMHPNVDVSPIEEDVVAKAKFVYDII 225
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
Y P KT L AE ++G++M + QA F ++TG K+ +
Sbjct: 226 YNPEKTLFLSYAEKYQIRYINGLDMLVNQANDSFKIWTGVNFDKKII 272
>gi|427726034|ref|YP_007073311.1| shikimate dehydrogenase [Leptolyngbya sp. PCC 7376]
gi|427357754|gb|AFY40477.1| shikimate dehydrogenase [Leptolyngbya sp. PCC 7376]
Length = 291
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 140/298 (46%), Gaps = 31/298 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 290
I TK+ G+I PV HS P++HN + + +Y+ P+ ++LK + + D
Sbjct: 2 QIFGTTKLLGVIGDPVKHSFSPLMHNAAIAELGTDYVYLAFPISANNLKTALDGFRAIDL 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GFS+ P+K+++M + + P AQ + AVNT+ + + + G NTD I ++
Sbjct: 62 KGFSITIPHKQSIMAHLEAIAPEAQMVGAVNTVWQTETGWQ--GTNTDVAGFIAPLKALD 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
K+ S SP V+ G GGA RA+ G G ++ + + E+ + A
Sbjct: 120 KDW-------STVSP------VILGNGGAARAVVVGCHQLGCPQIHVIGRNPEKLTTFAK 166
Query: 410 DVMGAARPFEDI--------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DYQ 458
G P E LN L N+TP+GMHPN D PVS E ++
Sbjct: 167 SWQGT--PLEQKLQTHLWGDLNRLIPTTKFLVNSTPVGMHPNIDASPVSAELMKLLSSDS 224
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+ +D +YTP T+ L+ A+ GA I G+EM ++Q + + P MR+ +L
Sbjct: 225 IAYDLIYTPSPTQFLQLAQNQGATIFDGLEMLVQQGAIALEKWLAQPVPVATMRQALL 282
>gi|443321693|ref|ZP_21050737.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
gi|442788605|gb|ELR98294.1| shikimate 5-dehydrogenase [Gloeocapsa sp. PCC 73106]
Length = 282
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 33/295 (11%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSP 288
+E I TK+ G+I P+ HS P++HN + + + +YVP V DL + +
Sbjct: 1 MEIITGKTKLLGVIGDPIEHSLSPVMHNAAIKALGLDYVYVPFAVKSADLGGAIAGLQAI 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ GF+V P+K+A++ F E+ PLAQ + A NT+ R + + G NTD E + + +
Sbjct: 61 NCQGFNVTIPHKQAIIPFLREISPLAQMVGATNTVWREATHWQ--GTNTDVEGFLAPLRE 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDI----DF 401
ER + PL + G GGA RA+ K G RVV ++ DF
Sbjct: 119 I--ERPWHEI-----KPL------VLGYGGAARAVVVALKRLGCPEIRVVGRNLQKLADF 165
Query: 402 ERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ--- 458
S + + P PE +L N TP+GM+P+TD P+ + Q
Sbjct: 166 AANWSEITSYDSSCLP-----ELLPET-ELLINTTPVGMYPDTDASPIESSLIGLIQPGA 219
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+V+D +Y P T+LL + + G I + G+EM + Q ++ + P E MR+
Sbjct: 220 IVYDLIYIPNPTKLLLETQKQGVIALDGLEMLVNQGAIALGIWLQRPLPVEIMRQ 274
>gi|430820141|ref|ZP_19438778.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
gi|430439831|gb|ELA50141.1| shikimate 5-dehydrogenase [Enterococcus faecium E0045]
Length = 284
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 144/289 (49%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-- 405
G + + L GAGGA +A+ A GA +V++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ + + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSLLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+TRLLK+A+ GA +G+ M + Q F L+T ++ P
Sbjct: 227 AVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMP 275
>gi|145577957|gb|ABP82697.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
poloniensis]
Length = 238
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + + + ++AK L + L E
Sbjct: 107 KRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHSVALSLEKATE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
+ I+ T +GMHP + P+ +L +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|347547878|ref|YP_004854206.1| putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346980949|emb|CBW84873.1| Putative shikimate 5-dehydrogenase [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 291
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G++V P K + K+ D++ P A+ + AVNT++ +G L G+ TD + A+++
Sbjct: 66 NLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + S + L
Sbjct: 171 QKTVEKINS-KTDCKAQLFDIEDHEQLRKEISESVIFTNATGVGMKPFEGETLLPSADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|429123570|ref|ZP_19184103.1| shikimate 5-dehydrogenase [Brachyspira hampsonii 30446]
gi|426280532|gb|EKV57545.1| shikimate 5-dehydrogenase [Brachyspira hampsonii 30446]
Length = 283
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 151/299 (50%), Gaps = 33/299 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
+NA+T + GL + P HS PI+HN F +N N IY+ VD +LK+ ++ + +
Sbjct: 2 QVNAETILTGLFASPSKHSISPIMHNEGFNKLNLNYIYLAFEVDKNNLKEAVNSIRTLNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ P K+ V+K+ D + A+ +VNTI+ ++G L GY+TD E I ++E+
Sbjct: 62 RGVNLSMPNKKEVIKYLDNISEAAELSQSVNTIVN--NNGILTGYSTDGEGFIKSLEE-- 117
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAKSL 407
E+ + + + + G GGA A+ A G + + +F D ++ K +
Sbjct: 118 -EQVF----------IKDKNITILGTGGASIAIISQAALYGVKEIYVFKRDKNWNEQKKI 166
Query: 408 ASDVMGAAR------PFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDY 457
++ ED IL + E +L NAT +GM + V + EE+ R+
Sbjct: 167 IDNIACKTNCSITLYSLEDKNILKSKIENSYVLINATSVGMK---EDVSLIEESSFFRND 223
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D +Y P KT+LLK AE G I++G+ M L Q F L+T + P E+++ I+
Sbjct: 224 LVVSDCIYHPAKTKLLKIAEKEGCKIINGMGMLLYQGALAFELWTNNKMPVEYIKNIIF 282
>gi|161528058|ref|YP_001581884.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
gi|259585286|sp|A9A233.1|AROE_NITMS RecName: Full=Shikimate dehydrogenase
gi|160339359|gb|ABX12446.1| shikimate 5-dehydrogenase [Nitrosopumilus maritimus SCM1]
Length = 273
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 24/288 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K F +I P+ HS P +H+ FR +N + Y+ + D+L + AGF+V
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKDELGEGIEGLKKIQIAGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +MK+ D++ I AVNT++ +DG L GYNTD + + + +K+R +
Sbjct: 63 IPHKIEMMKYLDKIDESCSLIGAVNTVV--SNDGVLKGYNTDMDGFL----EPLKKRNIE 116
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ +L GAGGA RA+ G AK + + I + E+A +L +
Sbjct: 117 ---------IENSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANNLVEFAKKIS 167
Query: 416 RPFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
I Q + A I+ NAT +G+ + P+S E + + +V+D VY P T
Sbjct: 168 LDANAITIDQVGESAKDYNIIVNATSIGLQ--NESSPISFEGVNEKTVVYDIVYLPMNTD 225
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK A+ A I+ G EM L QA+ F ++ G EAP M++ +L F
Sbjct: 226 FLKKAKEKNATIIFGYEMLLGQAVRAFEIWHGMEAPYNAMKKALLGGF 273
>gi|145577927|gb|ABP82682.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
oswaldocruzi]
Length = 238
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 128/250 (51%), Gaps = 22/250 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H+N + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMDYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQFISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSL----ASDVMGAARPFEDILN 423
+ +L GAGGA RA+ F G + + + + ++AK L + V A E
Sbjct: 107 KRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATK 166
Query: 424 FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAII 483
Q I+ T +GMHP + P+ +L+ +V D +Y P +T++L +A+ GAII
Sbjct: 167 EQGNYDIII-QTTTIGMHPCVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAII 225
Query: 484 VSGVEMFLRQ 493
+G++MF+ Q
Sbjct: 226 QNGIDMFVYQ 235
>gi|444353151|ref|YP_007389295.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
gi|443903981|emb|CCG31755.1| Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
[Enterobacter aerogenes EA1509E]
Length = 287
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 142/303 (46%), Gaps = 36/303 (11%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPD 289
E + T++ GLI+ P+ HS P +HN F H+ + Y+ VD +LK + +
Sbjct: 3 ERLTGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYAYLAFEVDNQELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + ++ D++ P AQ + AVNT++ +G L G+ TD + A+ +A
Sbjct: 63 LRGYNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVN--DNGVLTGHITDGTGYMRALSEA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL-- 407
G + G+ + GAGGA A++ A G + + F R
Sbjct: 121 -------------GIDIIGKKMTILGAGGAATAISVQAALDGVKAISI---FNRKDKFFA 164
Query: 408 -ASDVMGAARPFEDI------------LNFQPEKGAILANATPLGMHPNTDRVPVSEET- 453
A + R D L + + IL NAT +GM P ++ + ++
Sbjct: 165 NAEQTVAKIRDNTDCEIHLFDLDDHAKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSF 224
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E+++
Sbjct: 225 LRPDLIVSDVVYNPRKTYLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKEMPVEYVKS 284
Query: 514 IVL 516
I+
Sbjct: 285 ILF 287
>gi|193213291|ref|YP_001999244.1| shikimate 5-dehydrogenase [Chlorobaculum parvum NCIB 8327]
gi|193086768|gb|ACF12044.1| shikimate 5-dehydrogenase [Chlorobaculum parvum NCIB 8327]
Length = 296
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 36/297 (12%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFAGFSV 295
KVFGLI + V +S P++HN F+ + IY + + + + + AGF+V
Sbjct: 8 KVFGLIGRNVDYSWSPLIHNTAFQALGLPSIYTIFNIAAPELVGNALTGARALGIAGFNV 67
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYK+ V+ F DE+ P AQAI AVNTI+ +G+L G+NTD G+
Sbjct: 68 TIPYKKTVVPFLDELSPEAQAIGAVNTIVN--DNGRLTGHNTDIA-------------GF 112
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAKSLASDVMG 413
+ G+ + G GGA A AF + V + + E+A+++
Sbjct: 113 AAPLLPMAEQIHGKPVCIFGNGGAALAAVEAFRLHFHPSSVRLMVRNLEKAEAMLEGY-- 170
Query: 414 AARPF-EDILNFQPE---------KGAILANATPLGMHPNTDR----VPVSEETLRDYQL 459
A R E L + + + ++ NATP+G +D VP + L + Q+
Sbjct: 171 AHRELVEPCLTAELDTPDGERLLGECCVIVNATPIGTAGRSDAIQSVVPARRKLLHEGQI 230
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
V+D VY P +T LL +A AAGA +SG+EM + QA F+++TG+E P + +R+ VL
Sbjct: 231 VYDMVYNPLETPLLAEARAAGAETISGIEMLIGQAARSFSIWTGQEMPVDTVRKTVL 287
>gi|306820400|ref|ZP_07454037.1| shikimate dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551563|gb|EFM39517.1| shikimate dehydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 288
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I T++ GLI P+ HS+ P +HN F + Y+ + V + LK+ +
Sbjct: 4 RIQGTTRLIGLIGTPIKHSRSPHMHNSAFEKTGQDYAYLCLEVGKEGLKQALDALKLFNA 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ FP K+ V+++ DE+ A+ I +VNTI K+ GYNTD + +IE+
Sbjct: 64 KGSNITFPNKQEVIQYLDEISEDAKIIGSVNTITIDDETKKIKGYNTDGRGFVASIEEL- 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 409
+ YK G VL G GGAGRA+A G ++I DID E +
Sbjct: 123 -KIDYK-----------GNKVVLLGVGGAGRAIAIQLAYEGVGELIIKDID-EALMNEVR 169
Query: 410 DVMGAARPF--------EDILNFQPEKGAILANATPLGMHPNTDRVPV-SEETLRDYQ-L 459
+ + + P E+ L + + +L NATPLGM D + S + L D +
Sbjct: 170 ETINKSIPNCKVKLINDEETLKEELKDAVLLINATPLGMKGRVDMCAISSSDVLGDTKAF 229
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
V+D VY PR+T+L+K A+ G +G+ M L Q + ++ G + P +++R
Sbjct: 230 VYDIVYEPRETKLMKYAKEKGLQTTNGINMMLWQGALAYKIWIGVDMPIDYVR 282
>gi|402571542|ref|YP_006620885.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
gi|402252739|gb|AFQ43014.1| shikimate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
Length = 279
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 28/283 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
K F +I P+ HS P +HN + + N Y V++ L++ + FAG++V
Sbjct: 3 KQFAVIGNPIKHSLSPAMHNAGYETLGINAEYQRFRVEEHCLEEAVKGLRALGFAGWNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ F D + P A+ AVNT+ + +G+LIG+NTD + + ++E+ + RG K
Sbjct: 63 LPHKEAIVSFMDTLTPEAEKAGAVNTV--KNQNGRLIGHNTDGKGFVRSVENDL--RGLK 118
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV--MGA 414
G+ VL GAGGA + +A +G + I + + E+AK+L + +G
Sbjct: 119 -----------GKKAVLLGAGGASKGIAMALAQQGMNLHILNRNPEKAKTLVQIIHSVGG 167
Query: 415 ARPFEDILNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
F + F+P E +L T +G+ N + P S E + LV D ++ P +T
Sbjct: 168 TATFGE---FEPGDWLENLDLLVQTTSVGL--NKEPFPFSLEGIDKEALVVDIIFNPLET 222
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
L++A+ G +G+EM L Q + + G++AP + MR+
Sbjct: 223 SFLREAKKLGCRTQNGLEMLLYQGALAWEFWLGEQAPLDAMRQ 265
>gi|146416639|ref|XP_001484289.1| hypothetical protein PGUG_03670 [Meyerozyma guilliermondii ATCC 6260]
Length = 1210
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 228/523 (43%), Gaps = 52/523 (9%)
Query: 26 LSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEG 82
+S+ +A G D VE+R+D + ++ + II +P++ R GG
Sbjct: 710 VSDKLEAVTAGCDAVELRVDLLEDYSSTFVAEQTAIIRKYLNIPIIFTVRTVSQGGKIPD 769
Query: 83 DEHKRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
++ + +E L L A LG Y+D +L S + K S++ T+ I S + S ++
Sbjct: 770 EDLETIERLSLLAIKLGVVYLDLQLTYPSKTIDKILSANVF-TKIIASFHDPKREFSWKE 828
Query: 142 LGYLVSRMQAT--GADIIKLVFS---VNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQ 196
+ QA GADI+KLV S V D ++ QL H P+IA ++GE+G +S+
Sbjct: 829 PEWDNRFQQAINIGADIVKLVGSAQLVQDNIDLESFRQL--HTSRPLIAINMGEQGKLSR 886
Query: 197 LLSPKFNGALVYGSLKGTPVLGLPTVESLRQ-TYKVEHINADTKVFGLISKPVGHSKGPI 255
+L+P + +L G TV + ++ ++A K F +I KP+ HS+ P
Sbjct: 887 VLNPVLT-PVTSDTLTEKAAPGQLTVSEINGIANQIGLLSA--KSFWVIGKPIQHSRSPP 943
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFST-YSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
LHN ++ + + DD KK F DF G ++ P K +MK+ DE+ A
Sbjct: 944 LHNAGYKCLGLPHKFDRFESDDAKKVFEKLMKKSDFGGLAITMPLKLDIMKYVDELSEAA 1003
Query: 315 QAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS-PLAGRMF 371
+ I AVNT+ +++ + +G NTD G N A FG+ + +
Sbjct: 1004 KTIGAVNTVCLVKKDNHQIFVGDNTDW-------------VGISNSFAKFGAYGSSTQCG 1050
Query: 372 VLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAI 431
++ G GG RA F G + + R S D+ + I E+
Sbjct: 1051 LVVGGGGTSRAAVFALHQMGCKKIYM---INRTASKVHDIKKSLPEEYGIEVLDSEELVN 1107
Query: 432 LANATPLGMHPNTDRVPVSEETLRDYQ---------------LVFDAVYTPRKTRLLKDA 476
LA L + P+ + L+ + + +A Y PR T +++ A
Sbjct: 1108 LAEPVTLAVSCIPADKPIEAQLLKYLETLLAKGSENSHGVTPTLLEAAYKPRVTPIMELA 1167
Query: 477 EAA-GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
+ +V GVEM + Q QF L TG +AP + + V+A+
Sbjct: 1168 QDKFKWTVVPGVEMLVHQGERQFELHTGFKAPYRVIYDAVVAE 1210
>gi|414085080|ref|YP_006993791.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum LMA28]
gi|412998667|emb|CCO12476.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum LMA28]
Length = 289
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 30/303 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
E ++ T++ GL++ P+ HS P +HN F + + Y+ V D L+ +
Sbjct: 2 TERLSGHTELIGLMATPIRHSLSPTMHNEAFAKLGLDYAYLAFEVGTDQLENGIQAIRAL 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G ++ P K+ V K+ D++ P A+ + AVNTI+ +G L G+ TD +
Sbjct: 62 GMRGSNISMPNKQVVTKYLDKLSPAAEMVGAVNTIVN--DNGILTGHITDGTGFM----- 114
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD------IDF 401
RG K S + G + GAGGA A+ A G + + IF+ +
Sbjct: 115 ----RGLKQSDVS----IIGEKMTICGAGGAATAICIQAALDGVKELSIFNRQDEFFKNA 166
Query: 402 ERAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LR 455
ER +L ++ D+ L Q + I NAT +GM P D +++ T LR
Sbjct: 167 ERTVALINEKTDCKATLYDLKDQESLRQQIAESVIFTNATGVGMKPLQDESLITDPTMLR 226
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY P +T+LLK A+ G V+G+ M L Q F ++TG+E P E++RE++
Sbjct: 227 KELVVADVVYVPSETKLLKLAKEQGCKTVNGLGMMLWQGAAAFEMWTGQEMPVEYIRELL 286
Query: 516 LAK 518
K
Sbjct: 287 FEK 289
>gi|385260745|ref|ZP_10038888.1| shikimate dehydrogenase [Streptococcus sp. SK140]
gi|385190988|gb|EIF38416.1| shikimate dehydrogenase [Streptococcus sp. SK140]
Length = 285
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 147/308 (47%), Gaps = 49/308 (15%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNQAFEATNTNGVYLAWEVEGTDLAETAANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+G+ SF ++G+ VL GAGGA +A+ A G ++V +F + S
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILAQAILDGVSQVSVF---------VRSA 156
Query: 411 VMGAARPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVPVSE 451
M +P+ + L ++ K +L NAT +GM + +P+S
Sbjct: 157 SMEKTKPYLEKLQYETGFRVDLFALEDAQELQENIRKAELLVNATSVGMDGASQPIPISI 216
Query: 452 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
L + LV D +Y P +T LK A G ++G+ M L QA F L+TGKE P +
Sbjct: 217 -VLPERLLVADVIYQPFETPFLKWARNQGNQAINGLGMLLYQAAEAFQLWTGKEMPTAQI 275
Query: 512 REIVLAKF 519
E++ K+
Sbjct: 276 WELLKQKY 283
>gi|322372563|ref|ZP_08047099.1| shikimate dehydrogenase [Streptococcus sp. C150]
gi|321277605|gb|EFX54674.1| shikimate dehydrogenase [Streptococcus sp. C150]
Length = 285
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 33/291 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+Y+ + DL + D
Sbjct: 2 QIDGYTRLAAVVANPIKHSISPFIHNLAFEKTQVNGVYLAWEIPESDLAETVENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+ V+ F DE+ P AQ I AVNT++ R DG LIG+NTD ++++
Sbjct: 62 FGINLSMPYKQKVISFLDELSPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI---DFERAKSL 407
SP + +L GAGGA +A+ A GA+ V + ++AK+
Sbjct: 119 -------------SPKGAHLMIL-GAGGAAKAIVTQAVLDGAKKVSIYVRPQSLDKAKNS 164
Query: 408 ASDVMGAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
+M D+ FQ E K +L NAT +GM + +P++++T+ L
Sbjct: 165 FKTLMDQTDGHLEFHALSDVDYFQEELGKADLLVNATSVGM--DGKSLPIAKDTIFPKGL 222
Query: 460 VF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
+ D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 223 LIADIIYQPFETPFLALARQQGLEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|417656004|ref|ZP_12305695.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|418665234|ref|ZP_13226684.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|420163035|ref|ZP_14669782.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|420167992|ref|ZP_14674644.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
gi|329737254|gb|EGG73508.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|374409209|gb|EHQ80009.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU081]
gi|394234724|gb|EJD80298.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM095]
gi|394238020|gb|EJD83506.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM087]
Length = 269
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 36/289 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 411
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 412 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+LK+AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILKEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIHKL 265
>gi|78185871|ref|YP_378305.1| shikimate 5-dehydrogenase [Synechococcus sp. CC9902]
gi|78170165|gb|ABB27262.1| shikimate dehydrogenase [Synechococcus sp. CC9902]
Length = 289
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFR--HVNYNGIYVPMFVDDLKKFFSTYSSPDFA 291
IN DT + GL+ PV HS P +HN + +N++ + +P ++LK+ + +
Sbjct: 2 INGDTGLVGLLGNPVRHSLSPAMHNAALQALQLNWSYLALPCASENLKEVLQGLRAVNCR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAI 350
G +V P+K+ V + C E+ PLA+ + AVNT+I P D G G NTD E +T + +
Sbjct: 62 GLNVTIPHKQDVAELCQELSPLAKRLGAVNTLI--PLDSGGWHGTNTDVEGFLTPLGE-- 117
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLAS 409
+ ++N + + G GG+ RA+A G +S R + + + E + +
Sbjct: 118 -QSSWQNCHGA-----------IIGCGGSARAIAAGLQSLRLSSITVIGRRQEALDAFIA 165
Query: 410 DVMGAARPFEDILNFQPE------KGAILANATPLGM--HPNTDRVPVSE---ETLRDYQ 458
D+ P L P+ + ++ N TP+GM H + P+ E L++
Sbjct: 166 DLQRKDAPLTACLQSSPDLASLMKRADLVVNTTPVGMAQHGDAQAFPLGEAIWSHLQESA 225
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVLA 517
+++D VYTPR T L+ ++ G + G+EM ++Q L++ + + P E MR A
Sbjct: 226 MLYDLVYTPRPTAWLRWGQSRGHRCIDGLEMLVQQGAASLRLWSDRNDVPVETMRRAAEA 285
Query: 518 KF 519
Sbjct: 286 AL 287
>gi|119491415|ref|ZP_01623434.1| shikimate 5-dehydrogenase [Lyngbya sp. PCC 8106]
gi|119453410|gb|EAW34573.1| shikimate 5-dehydrogenase [Lyngbya sp. PCC 8106]
Length = 287
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 31/293 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I P+ HS P++HN + + +Y+P + DL + +++
Sbjct: 2 IQGTTKLLGVIGDPIEHSLSPVMHNAAIAEMRVDYVYLPFPIQSTDLDAALAGFAAIGVQ 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ +V +A+A+ AVNT+ R + G NTD + +++
Sbjct: 62 GFNVTIPHKQAILSRLSKVSKIAEAVGAVNTVWRTSEGWE--GTNTDVAGFLAPLQN--- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+F S + V+ G GGA RA+ G G + + + ++ +
Sbjct: 117 -------INTFWSK---KTAVILGNGGASRAVVAGCVELGITEIYVIGRNLQKLEVFQQS 166
Query: 411 VMGAARPFEDILNFQP--------EKGAILANATPLGMHPNTDRVPVSE---ETLRDYQL 459
+ + P L Q + +L N TP+GM+P+ + PV+E + L+ +
Sbjct: 167 WLES--PLSLSLQIQTWENLTEIIHQADLLVNTTPVGMYPHVENSPVTEAVMDRLKSDAI 224
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+D +YTP T+ L A+A GAII+ G+EM ++Q L+ + P E MR
Sbjct: 225 AYDLIYTPNPTQFLSLAKAKGAIIIDGLEMLVQQGASALQLWLKQSVPVEVMR 277
>gi|402845078|ref|ZP_10893425.1| shikimate dehydrogenase [Klebsiella sp. OBRC7]
gi|423111495|ref|ZP_17099189.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5243]
gi|423112487|ref|ZP_17100178.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5245]
gi|376376694|gb|EHS89471.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5243]
gi|376390864|gb|EHT03546.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5245]
gi|402272678|gb|EJU21896.1| shikimate dehydrogenase [Klebsiella sp. OBRC7]
Length = 287
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V ++LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD T A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDG----TGYMRA 116
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
+KE G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 117 LKEEGID---------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRKDKFFANAE 167
Query: 406 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHVKNILF 287
>gi|253578605|ref|ZP_04855877.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850923|gb|EES78881.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 290
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
+ +I T + L+ PV HS P++HN +FR + + +Y+ V++ L + +
Sbjct: 1 MNNITGHTGLTALLGSPVAHSISPLMHNESFRLLGLDYVYLCFDVNEETLPAAVAGLKTC 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF++ P K +++ DE+ P AQ I AVNT++ +GKLIGYNTD + ++ D
Sbjct: 61 GIRGFNLTMPNKNKIVELLDELSPEAQLIGAVNTVLN--DNGKLIGYNTDGYGFMQSVRD 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFER---- 403
A G + G+ + G GGA A+ A A A V IF R
Sbjct: 119 A-------------GHDITGKNITVMGVGGASMAICAQSALDGAASVHIFARRTSRYWNR 165
Query: 404 ----AKSLASDVMGAARPFED----ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR 455
A++L++ F++ L + +L NAT +GM P+ D + + +L
Sbjct: 166 TQKFAENLSAKTGCQVCLFDNDDHTALRDSIAQSYLLINATSVGMVPDIDDTIIKDTSLF 225
Query: 456 DYQLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+LV D VY P++TRLL++A+A G +G+ M L Q F ++TG+E P ++E
Sbjct: 226 HPELVVADVVYEPQETRLLREAKATGCQTFNGMYMLLHQGAKAFQIWTGQEMPVSVIKE 284
>gi|449541458|gb|EMD32442.1| hypothetical protein CERSUDRAFT_161831 [Ceriporiopsis subvermispora
B]
Length = 1621
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 225/538 (41%), Gaps = 59/538 (10%)
Query: 22 VEQVLSNMYQAKAEGADVVEIRLDCINN---------FQPG-----KDLEIILTKKPLPV 67
+ + L ++ Q A G D VE+R+D + + + P + + +K LP+
Sbjct: 1102 ITRALPHIEQLTA-GVDAVELRVDLLRSPKDFDKLGPYVPSVAYVTDQVAALRSKTDLPI 1160
Query: 68 LIVYRPKWAGGLYEGDEHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
+ R GG + D K L H A LG +YVD E+ + + Q + G
Sbjct: 1161 VFTVRTVSQGGQFPDDAEKEAFTLFHTAIRLGVEYVDVEITWSEKSI--QDLVVRKGHSQ 1218
Query: 127 IVSCNLDCETPSEEDLGYLVS---RMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-- 181
IV+ D D G +V R+ DI+KLV N++ + +++ + +
Sbjct: 1219 IVASWHDWSGNMAWD-GKVVEAKYRIAHAFGDIVKLVGKANELDDSLALYRFVQRMRASS 1277
Query: 182 ---PIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NA 236
PIIA ++G G +S++L+ F+ S P P S Q ++
Sbjct: 1278 DAKPIIAINMGTEGQLSRILNSTFSPV----SHPLLPSKAAPGQLSFAQIQTALNLIGQL 1333
Query: 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
+ F L P+ HS P LHN F + Y + + + + +T +S DF G SV
Sbjct: 1334 PARRFFLFGNPIKHSMSPTLHNTGFEILGLPHKYELLETETIGEIKATLASSDFGGASVT 1393
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDGKLIGY--NTDCEASITAIEDAIKER 353
P+K V+ D + P A+AI AVNTII +R +DG I Y NTD +I A+
Sbjct: 1394 IPFKLDVLPLLDALSPEAEAIGAVNTIIPQRKADGSCILYGDNTDWLGISRSIRTAMP-- 1451
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVM 412
S P A ++ GAGG RA + G R+ +F+ A+ LA+
Sbjct: 1452 ------TSMKHPEAA---LVIGAGGTSRAAIYALHKLGVQRIYLFNRTRRSAEVLANAFP 1502
Query: 413 GAARPFEDILNFQPEKG---AILANATPLGMHP------NTDRVPVSEETLRDYQLVFDA 463
+ L P G I+ + P N +P+S +V D
Sbjct: 1503 DVEVEILETLGTWPAGGPAPTIIVSTVPASATTTDPSVKNALYLPISMFESATGGVVVDM 1562
Query: 464 VYTPRKTRLLKDAEAAG--AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LL AE G V GV++ L Q QF L+TG+ PK + E V + +
Sbjct: 1563 AYKPAETPLLALAENQGDQWKTVKGVQVLLEQGYEQFQLWTGRRCPKATVAERVWSAY 1620
>gi|27376170|ref|NP_767699.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 110]
gi|27349309|dbj|BAC46324.1| shikimate 5-dehydrogenase [Bradyrhizobium japonicum USDA 110]
Length = 292
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 138/284 (48%), Gaps = 34/284 (11%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + G Y + V L+ FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHERAAEALGLRGHYQLIEVAGADAAGLRLMLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV+ D + P A A+ AVNT++ R DG+L G+NTD G+
Sbjct: 75 YPYKEAVVPLLDALAPGAAAMGAVNTVVVR--DGRLTGHNTDTT-------------GFA 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDFERAKSLASDVM--- 412
A +P +G + G GG G+A+AF S A + IFD + RA+ LA+ +
Sbjct: 120 RAVAPLLAP-SGNAVAVIGTGGVGKAIAFALASLEVADLRIFDSEPARAEKLAALLAKHG 178
Query: 413 GA--ARPFEDILNFQPEKGAI-LANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
GA A+ ED L+ GA L N TP+GM PN +PV L + V DAVY+P
Sbjct: 179 GARVAKSVEDALD-----GATGLVNGTPVGMLPNRG-MPVPAALLHEKLWVADAVYSPLI 232
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
T LL A+ GA I++G E+ + QA F LFTG E M E
Sbjct: 233 TPLLAAAQERGAKIMTGRELAIYQAADAFELFTGLAPSTEVMGE 276
>gi|291545243|emb|CBL18352.1| shikimate 5-dehydrogenase [Ruminococcus champanellensis 18P13]
Length = 281
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGF 297
++ +GLI P+GHS P LH F + Y + + + G++V
Sbjct: 2 SEAYGLIGHPLGHSMSPFLHKALFALGGKDASYRLLDLAPETMEQQVQDMTGYLGWNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
PYKE ++ D + P A AVN + R P DG L GYNTDC + A+ D
Sbjct: 62 PYKERIIPLLDRLDPSAARYNAVNCVRREP-DGTLTGYNTDCTGFLHAVRD--------- 111
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK--SLASDVMGA- 414
L GR+ +L G GGAGR +A A + GA++ I + E+ + +LA+ + A
Sbjct: 112 ------FSLGGRVLLL-GCGGAGRMMATEAATAGAQLTIGVRNPEKPELTALAAHLRKAY 164
Query: 415 ------ARPFEDIL-NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
PF +I +F +L N+TP+GM P+T+ PV + +R VFDA+Y P
Sbjct: 165 PAAGVQLLPFGEISGDFD-----LLLNSTPVGMFPHTEGCPVPDAVIRRCGAVFDAIYNP 219
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+TRL++ A AG V G++M ++QA ++ G +
Sbjct: 220 EQTRLMELARQAGIPTVGGMDMLVQQAACAQEIWYGAQ 257
>gi|406927177|gb|EKD63250.1| hypothetical protein ACD_51C00313G0006 [uncultured bacterium]
Length = 257
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 27/278 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K FG+++ P GHS P +H F+ + + +Y V +DL+ F G +V
Sbjct: 2 KKFGILAHPAGHSLSPKMHKAAFKTLKVSAVYEAFDVKPNDLEDFMKNLHEKHVDGLNVS 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYK VM++ + P+A+ I AVN I ++ +GK G N D + I ++
Sbjct: 62 MPYKTEVMQYLAGIDPVAKKIGAVNCIYKK--NGKYHGTNYDWKGIIEPLKKI------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+PL G+ +L GAGGA +A +G K GA+V I + FE AK LA A
Sbjct: 113 -------TPLKGKKVLLLGAGGAAKAACYGLKKEGAKVFILNRTFESAKHLADQYGFKAT 165
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
+ F PE I+ N T +G N + P++ +D ++V D +Y KTR +KDA
Sbjct: 166 ---ETAEFMPE---IVINCTSVGFD-NPEESPINPRVFKDVKIVLDIIYG-HKTRFVKDA 217
Query: 477 EAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
AAG I++G+E+ L Q + G +APKE MRE
Sbjct: 218 RAAGVPYIITGLEVLLYQGYATLEKWLGVKAPKEVMRE 255
>gi|304316729|ref|YP_003851874.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778231|gb|ADL68790.1| shikimate 5-dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 283
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 28/292 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
H+NA T ++G+I P+GHS P +HN F VN N +YV V ++LK +
Sbjct: 2 HVNAKTDIYGIIGHPIGHSLSPFIHNAAFESVNLNSVYVSFDVHEENLKDAILGIKALGI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+KE VMK+ D + A+ I AVNTI + ++G L GYNTD +T +++
Sbjct: 62 KGINVTVPHKENVMKYLDYISDEAKLIGAVNTI--KNNNGILEGYNTD----VTGFTESL 115
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 409
KE + G+ V+ GAGGA RA+A G G + ++I + E+A++L++
Sbjct: 116 KEHDI---------VVEGKNAVILGAGGAARAVAVGLSLTGVKSIMIANRSKEKARNLSN 166
Query: 410 DV-----MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
+ + D LN Q E+ IL N T +GM P+ + PV E + V+D +
Sbjct: 167 YIKNNLGINCIDVTYDDLN-QLEEIDILVNVTSVGMFPDINLSPVDESIAVKAKFVYDII 225
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
Y P KT+LL AE ++G +M + QA F ++TG F + I+L
Sbjct: 226 YNPEKTQLLSYAEKHSIRNLNGFDMLINQANHSFKIWTG----MNFNKNIIL 273
>gi|169344492|ref|ZP_02865461.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
gi|169297412|gb|EDS79521.1| shikimate 5-dehydrogenase [Clostridium perfringens C str. JGS1495]
Length = 271
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPDIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|333910252|ref|YP_004483985.1| shikimate dehydrogenase [Methanotorris igneus Kol 5]
gi|333750841|gb|AEF95920.1| Shikimate dehydrogenase [Methanotorris igneus Kol 5]
Length = 283
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 154/291 (52%), Gaps = 23/291 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA TK+ GL+ PV HS PI+HN FR N N +Y+ V ++LK +
Sbjct: 2 INAKTKLIGLLGHPVEHSFSPIMHNAAFRDKNLNYVYLAFDVLPENLKYVIDGAKAMGIV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +MK+ DE+ A+ I AVNTI + + K +GYNTD + A+E+ I
Sbjct: 62 GFNVTIPHKIEIMKYLDEIDENAKLIGAVNTI--KIENNKAVGYNTDGLGARMALEEEI- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
G + + ++ GAGGA RA+AF ++ ++I + E+AK+LA ++
Sbjct: 119 -----------GKKVENKNIIIYGAGGAARAVAFEL-AKNNNIIIANRTVEKAKNLAEEI 166
Query: 412 MGAARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVY 465
E+ + + I+ NATP+GM+PN D P V E + +V D +Y
Sbjct: 167 REKLNKTEEEVKYSGLDANLDGIDIIINATPIGMYPNVDVKPIVKAEQMHKDMVVMDLIY 226
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
P +T LLK+A+ AGA ++G+ M + Q F ++T ++ E M+ ++
Sbjct: 227 NPLETVLLKEAKKAGAKAINGLGMLIYQGAIAFEIWTNEKPNIEVMKNAII 277
>gi|154506092|ref|ZP_02042830.1| hypothetical protein RUMGNA_03634 [Ruminococcus gnavus ATCC 29149]
gi|336433440|ref|ZP_08613260.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153793591|gb|EDN76011.1| shikimate dehydrogenase [Ruminococcus gnavus ATCC 29149]
gi|336016371|gb|EGN46158.1| shikimate 5-dehydrogenase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 287
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 143/302 (47%), Gaps = 30/302 (9%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
++ I T + GL PV HS P++HN +F H+ + +Y+ V D L +
Sbjct: 1 MKQITGHTGLTGLFGSPVAHSISPMMHNASFEHLGLDYVYLAFDVGTDKLAAAVDGLRAM 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ GF++ P K + + CD + P A+ AVNT++ +G L G+ TD + A +D
Sbjct: 61 NVRGFNLTMPDKNKMCELCDRLSPAAEISQAVNTVVN--DNGILTGHTTDGTGYLLAAKD 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERA 404
A G L G+ L GAGGA ++ A G + + +F I + RA
Sbjct: 119 A-------------GYDLIGKKMTLLGAGGAATSILVQAALDGLSEISVFSIHDQFYVRA 165
Query: 405 KSLASDVMGAAR------PFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRD 456
+ + + FED IL + IL N T +GM PNTD +++ +
Sbjct: 166 EQIVQTLNERTNCKVQLFDFEDDSILRREIADSYILTNGTSVGMAPNTDASIINDPSFFH 225
Query: 457 YQLVF-DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
L+ D +Y P++T+LL+ A AG +G+ M L Q F L+TG+E P E ++E+
Sbjct: 226 KDLIVSDVIYNPKETKLLRLAREAGCPTFNGLYMLLYQGAEAFKLWTGQEMPVEKIKELY 285
Query: 516 LA 517
+
Sbjct: 286 FS 287
>gi|145577945|gb|ABP82691.1| shikimate 5-dehydrogenase [Bacillus thuringiensis serovar
graciosensis]
Length = 238
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 20/249 (8%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCD 308
S P++HN F H++ + Y V + L + + +GF+V P+K A+M + D
Sbjct: 1 SLSPVMHNDAFEHLSMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVTTPHKVAIMNYLD 60
Query: 309 EVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
E+ PLA+ I AVNT++ + DGKLIGYNTD + A++ E PL
Sbjct: 61 EIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSE------------PLQE 106
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILNFQPE 427
+ +L GAGGA RA+ F G + + + + ++AK L + L E
Sbjct: 107 KRILLLGAGGASRAIYFSLTDVGVKEIDVANRTVDKAKELIAACTATVHSVALSLEKATE 166
Query: 428 KGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
+ I+ T +GMHP P+ +L+ +V D +Y P +T++L +A+ GA+I
Sbjct: 167 EQGNYDIIIQTTTIGMHPRVQHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQ 226
Query: 485 SGVEMFLRQ 493
+G++MF+ Q
Sbjct: 227 NGIDMFVYQ 235
>gi|392530088|ref|ZP_10277225.1| shikimate 5-dehydrogenase [Carnobacterium maltaromaticum ATCC
35586]
Length = 289
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 30/302 (9%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E ++ T++ GL++ P+ HS P +HN F + + Y+ V D L+ +
Sbjct: 3 ERLSGHTELIGLMATPIRHSLSPTMHNEAFAKLGLDYAYLAFEVGTDQLENGIQAIRALG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G ++ P K+ V K+ D++ P+A+ + AVNTI+ +G L G+ TD +
Sbjct: 63 MRGSNISMPNKQVVTKYLDKLSPVAEMVGAVNTIVN--DNGILTGHITDGTGFM------ 114
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFD------IDFE 402
RG K S + G + GAGGA A+ A G + + IF+ + E
Sbjct: 115 ---RGLKQSDVS----IIGEKMTICGAGGAATAICIQAALDGVKELSIFNRQDEFFKNAE 167
Query: 403 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
R +L ++ D+ L Q + I NAT +GM P + +++ T LR
Sbjct: 168 RTVALINEKTDCKATLYDLKDQESLRQQIAESVIFTNATGVGMKPLQEESLITDPTMLRK 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY P +T+LLK A+ G V+G+ M L Q F ++TG+E P E++RE++
Sbjct: 228 ELVVADVVYVPSETKLLKLAKEQGCKTVNGLGMMLWQGAAAFEMWTGQEMPVEYIRELLF 287
Query: 517 AK 518
K
Sbjct: 288 EK 289
>gi|334127717|ref|ZP_08501620.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
gi|333388853|gb|EGK60023.1| shikimate dehydrogenase [Centipeda periodontii DSM 2778]
Length = 288
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 141/295 (47%), Gaps = 25/295 (8%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSP 288
++ I TK+ G++ P+GHS PI+ N R + +Y +P+ D L
Sbjct: 1 MQMITGKTKLLGVLGAPIGHSLSPIIQNEALRAAGLDYVYAALPVRADALTSAVHGLRDA 60
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
AGF+V P+K ++ D++ A+ I AVNT++ +G+L+G+NTD
Sbjct: 61 GIAGFNVTIPFKTEIIPLMDDLSEDARRIHAVNTVVVE-ENGRLVGHNTDVT-------- 111
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 408
G+ G A G LAG+ VL GAGGA RA+ +G G +V+ + + +
Sbjct: 112 -----GFLAGFAERGIALAGKKAVLIGAGGAARAVLWGLLRSGVSLVVIGVRSAQKGAAL 166
Query: 409 SDVMGA-----ARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLV 460
+ A A F+D F G+ I+ TPLGM P+ +P V ++ +
Sbjct: 167 AADFAADGDVRAYAFDDP-AFTSALGSADIIVQTTPLGMTPHVGEMPPVDVAAIKSSAVF 225
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+D +YTP +TR L+ A A G ++G M + Q F L+TG E M+ ++
Sbjct: 226 YDLIYTPAETRFLRAAAAHGHETINGETMLVAQGAEAFFLWTGVRPDMELMKRVL 280
>gi|346976957|gb|EGY20409.1| pentafunctional AROM polypeptide [Verticillium dahliae VdLs.17]
Length = 1574
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 218/507 (42%), Gaps = 66/507 (13%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P + + + + +P++ R GG + ++H + +L+
Sbjct: 1071 GSDAVELRVDLLQDQTPESVARQVSALRSAAGMPIIFTLRTVSQGGRFPDEDHTQALSLY 1130
Query: 93 -LAEDLGADYVDFE-------LKVASNILGKQ--YSSHQSGTRFIVSCNLDCETPSEEDL 142
LA +G +++D E L+ +N+ G+ +SH R ++S TP
Sbjct: 1131 ILALRMGVEFIDLEMTWPEHILQTVTNLKGRSRIIASHHD-PRGVLSWKNGSWTP----- 1184
Query: 143 GYLVSRMQATGADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLL 198
+R G+ +IKLV S+ D ++AR +L+ PIIA ++G G +S++L
Sbjct: 1185 --FYNRALQWGS-VIKLVGTAQSMEDNYDLARFKSDMLASHPTPIIALNMGALGKLSRVL 1241
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPIL 256
NG L S P P S + + + N D + F L KP+ S+ P L
Sbjct: 1242 ----NGFLTPVSHPALPFKAAPGQLSAAEIRRALFLLGNIDAQSFYLFGKPISKSRSPAL 1297
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN F Y + D + + PDF G SV P K VM D+V A+
Sbjct: 1298 HNSLFDLTGLPHKYGLVETDQADEVAAVIREPDFGGASVTIPLKLDVMPLLDQVSESAKV 1357
Query: 317 IAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFV 372
I AVNTII P DG +L+G NTD + +E GT + + +
Sbjct: 1358 IGAVNTIIPIPLDGSQKRRLLGDNTDWRGMVHCLESIGVASESTAGTTTASA-------L 1410
Query: 373 LAGAGGAGRALAFGAKSRGARVVIF------DIDFERAKSLAS-DVMGAARPFE-DILNF 424
+ G+GG RA F KS G + ++ RA A D+ P E L
Sbjct: 1411 VIGSGGTTRAAIFALKSHGYHPIYMLARNEQSLETIRASFPADFDLRALGGPAEASALAV 1470
Query: 425 QPEKGAILANATPLG--MHPNTD-------RVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
P ++ + P M P+ + PVS+E R ++ + Y PR T ++
Sbjct: 1471 AP---TVVISTIPADKPMDPSLRETLEVVLKSPVSDERTR---VLLEMAYQPRHTAAMRL 1524
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFT 502
AE AG + G E+ Q QF ++T
Sbjct: 1525 AEDAGWRTIPGAEVLAAQGWHQFQMWT 1551
>gi|387761673|ref|YP_006068650.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
gi|339292440|gb|AEJ53787.1| shikimate 5-dehydrogenase [Streptococcus salivarius 57.I]
Length = 285
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + +
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ R DG LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNR--DGHLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA---KSRGARVVIFDIDFERAKSL 407
SP + +L GAGGA +A+ A ++ V + ++AK
Sbjct: 119 -------------SPRDAHLTIL-GAGGAAKAIVTQAVLDDAKKVSVYVRPQSLDKAKES 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 459
++ A D+ FQ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQATCQLEFHALNDLEYFQEELGQADLLVNATSVGMDGESLPIPTDTKFPKGL-L 223
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|418616268|ref|ZP_13179193.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
gi|374821094|gb|EHR85161.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU120]
Length = 269
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 36/289 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP++ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVYQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 411
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 412 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|404412569|ref|YP_006698156.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
gi|404238268|emb|CBY59669.1| shikimate 5-dehydrogenase [Listeria monocytogenes SLCC7179]
Length = 291
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 145/302 (48%), Gaps = 32/302 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I T++ GLI+ P+ HS P +HN F + + +Y+ V D LK + +
Sbjct: 6 TERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAM 65
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ G +V P K + K+ D++ P A+ + AVNT++ DG L G+ TD + A+++
Sbjct: 66 NLRGCNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN--DDGVLTGHITDGTGYMRALKE 123
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF---- 401
A G + G+ + GAGGA A+ A G + + IF+ DF
Sbjct: 124 A-------------GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANA 170
Query: 402 ----ERAKSLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHP-NTDRVPVSEETL 454
E+ S +D ED + E + I NAT +GM P + + + + L
Sbjct: 171 EKTVEKINS-KTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPNADML 229
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R +V D VY P KTRLL+ AE G ++G+ M L Q F ++T KE P ++++EI
Sbjct: 230 RPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEI 289
Query: 515 VL 516
+
Sbjct: 290 LF 291
>gi|377832060|ref|ZP_09815024.1| shikimate 5-dehydrogenase [Lactobacillus mucosae LM1]
gi|377554067|gb|EHT15782.1| shikimate 5-dehydrogenase [Lactobacillus mucosae LM1]
Length = 301
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLK--KFFSTYSSPDFA 291
+N T + GL++ P+ HS P +HN F + N Y+ +D+ K K + D
Sbjct: 14 LNGHTILIGLMADPIRHSMSPTMHNNAFAKLGLNYAYLCFEIDNQKLPKAIDAIRTLDMR 73
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K+ V+ + D + A+ AVNTI+ G L GY TD + +++D
Sbjct: 74 GSNISMPNKQKVIPYLDRLDESAELCQAVNTIVN--DHGILTGYTTDGIGFMQSLKDE-- 129
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
G + G+ VL GAGGAG +A A G + + +F+ID ++ ++ +
Sbjct: 130 -----------GLDITGQKMVLTGAGGAGTPIAMQAAIEGVKEIALFNIDDDKWENAVRN 178
Query: 411 V---------MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRDYQ 458
V ED + + E + I +AT +GM P D V + T
Sbjct: 179 VKIINEKTGAHATLHHLEDQADLKKELASCDIYVDATGVGMKPLEDMTLVEDPTWFHQDM 238
Query: 459 LVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
+V+D VY PR+T+L++ A+ AG + +G+ M L Q F L+TG++ P E++R ++
Sbjct: 239 IVYDTVYAPRETKLMQVAKQAGVDHVFNGLGMMLEQGAAAFKLWTGQDMPVEYIRNLLFK 298
Query: 518 K 518
+
Sbjct: 299 E 299
>gi|409385048|ref|ZP_11237769.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
gi|399207426|emb|CCK18684.1| Shikimate/quinate 5-dehydrogenase I beta [Lactococcus raffinolactis
4877]
Length = 272
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 28/284 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDF 290
IN TK+ +++ P+ HS P +HN F HV NG+Y+ DL + + D
Sbjct: 2 EINGYTKLAAVVANPIKHSLSPFIHNLAFDHVGENGVYLAFETPEADLGSVIESIKTLDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEA + + DE+ +A+ A+NTI+ R DGKL G +TD ++
Sbjct: 62 YGVNLSMPYKEAAVPYMDELSEVAKLTGAINTIVNR--DGKLFGTSTDGAGFFKSL---- 115
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLAS 409
+ +K + G + GAGGA R++ A +GAR + +++ ++ L +
Sbjct: 116 --KHFK---------VKGSTITVIGAGGAARSIIAEAAVQGARQITVYNRTYK--PELFT 162
Query: 410 DVMG--AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
+ G +P D+ G +L N T LGM + +P++ + +D LV D +Y P
Sbjct: 163 NYPGNIVFKPLSDLTELT---GDLLVNTTSLGMDGVSLPIPMALQLPKD-MLVADVIYQP 218
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
+T LL A++ G V+G+ M L QA F L+TG E P + +
Sbjct: 219 IETPLLTYAKSQGNSTVNGLGMLLYQAAESFKLWTGHEMPTDII 262
>gi|168217169|ref|ZP_02642794.1| shikimate 5-dehydrogenase [Clostridium perfringens NCTC 8239]
gi|182380759|gb|EDT78238.1| shikimate 5-dehydrogenase [Clostridium perfringens NCTC 8239]
Length = 271
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|257884631|ref|ZP_05664284.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
gi|257820469|gb|EEV47617.1| quinate/shikimate 5-dehydrogenase [Enterococcus faecium 1,231,501]
Length = 284
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 30/289 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ TK+ GL + P HS P++HN F N + +Y+ V+ +LK+ + + D
Sbjct: 2 ISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFKVNPMNLKQAVESIRTFDML 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P K AV+ + DEV AQ I AVNTI+ G+LIGYNTD + ++++A
Sbjct: 62 GVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEK--GRLIGYNTDGAGFMQSVQEA-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAK-- 405
G + + L GAGGA +A+ A GA ++ + F + K
Sbjct: 118 -----------GISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKET 166
Query: 406 ----SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
S + R F D + + + +L NAT +GM ++ P+ + ++ L
Sbjct: 167 FEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENL 226
Query: 460 -VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
VFD +Y PR+T LLK+A+ GA +G+ M + Q F L T ++ P
Sbjct: 227 AVFDLIYAPRETCLLKEAKKVGAKGYNGLGMLIYQGAIAFELCTKEKMP 275
>gi|148257367|ref|YP_001241952.1| shikimate 5-dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146409540|gb|ABQ38046.1| shikimate dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 293
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 132/277 (47%), Gaps = 23/277 (8%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD-----LKKFFSTYSSPDFAGFSVG 296
GLI P+ HS P +H + Y + V L FAG +V
Sbjct: 15 GLIGAPIAHSASPAMHEHAAAALGVRCHYQLIEVAGADRAGLATLLEGVRRLGFAGVNVT 74
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKEAV++ DE+ P A A+ AVNT++ R DG+LIG+NTD G++
Sbjct: 75 YPYKEAVVELLDELAPKAAAMGAVNTVVVR--DGRLIGHNTDTT-------------GFE 119
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 415
A S L GAGG G+A+AF A A + I+D + RA+ LA + +
Sbjct: 120 RAVAPLLSQTGRGAVALIGAGGVGKAIAFALANLNVAGLRIYDTERARAERLARLLPAST 179
Query: 416 RPFE-DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
D + + A + N TP+GM PN PV + LR V DAVY+P T LLK
Sbjct: 180 GAVVVDSVERALQGAAGVVNGTPIGMLPNRG-TPVPDHLLRTDLWVADAVYSPLWTPLLK 238
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
A+A GA ++ G E+ + QA F LFTG E M
Sbjct: 239 AAKARGAQVLLGRELAIYQAADAFELFTGLAPSTEAM 275
>gi|326433195|gb|EGD78765.1| hypothetical protein PTSG_11780 [Salpingoeca sp. ATCC 50818]
Length = 1521
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 208/485 (42%), Gaps = 44/485 (9%)
Query: 38 DVVEIRLDCINN-----FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
D+VE+R+D ++ F G+ + ++ P+L R GG DE L
Sbjct: 1027 DMVELRVDLLDQPTDAAFIAGQ-IALLRASTAKPILFTVRSAKQGGKLALDEDGYFNLLS 1085
Query: 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQAT 152
L LG D +D E S+ + + + GT ++S + +++ LV
Sbjct: 1086 LGARLGCDALDVETCWDSSHI-ESVCAPLRGTTIVMSQHFGRPCTHVDEVLTLVQGSNLP 1144
Query: 153 GADIIKLVFSVNDITEIARIFQLLSHCQV------PIIAYSVGERGLVSQLLSPKFNGAL 206
D+IK+VF+ ++++ + Q P+I +GE+G +S++ + +
Sbjct: 1145 FVDVIKIVFTATEVSDCFLLQQARERVHAEKVVTKPMILLLMGEQGRLSRVTNTMLT-PV 1203
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNY 266
+ ++ GT G T E + + + + F ++ PV S P++H FR
Sbjct: 1204 THANMPGTAAPGQLTWEQVLRLRRTLGLLRPRSFF-IVGSPVALSPSPLMHRTGFRLAGL 1262
Query: 267 NGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRR 326
Y + + S ++S F G SV P+K++V+ + A+ I AVNT++R
Sbjct: 1263 PWTYERLDTTSMVDVRSVFASEGFMGASVTMPFKQSVLPLLAWMDEHARRIGAVNTVVRG 1322
Query: 327 PS-DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385
+ + +L+G+NTD + ++ A+ + G + VL GAGG RA +
Sbjct: 1323 GAGNTQLLGFNTDWVGIVKPLQSAMPAETRER---------TGNVLVL-GAGGTARAACY 1372
Query: 386 GAKSRG-ARVVIFDIDFERAKSLASD----VMGAARPFEDILNFQPEKGAILANATPLGM 440
G V + + ERA++L D + +A +D++ +
Sbjct: 1373 ALHYLGFTSVYVVNRTPERAEALCRDFGVRAIDSAEALDDVVLI-------------IST 1419
Query: 441 HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNL 500
P T V L+ +VFD Y PR T LL+ A AAG I G++M + Q I Q L
Sbjct: 1420 LPPTAAATVPATLLQSKPVVFDVTYIPRMTPLLEQAHAAGCRIFGGIDMLIAQGIEQQRL 1479
Query: 501 FTGKE 505
FT +
Sbjct: 1480 FTRRH 1484
>gi|375258961|ref|YP_005018131.1| shikimate 5-dehydrogenase [Klebsiella oxytoca KCTC 1686]
gi|397655934|ref|YP_006496636.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella oxytoca E718]
gi|365908439|gb|AEX03892.1| shikimate 5-dehydrogenase [Klebsiella oxytoca KCTC 1686]
gi|394344573|gb|AFN30694.1| Shikimate/quinate 5-dehydrogenase I beta [Klebsiella oxytoca E718]
Length = 287
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V + LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNETLKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD T A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDG----TGYMRA 116
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
+KE G + G+ + GAGGA AL A G + + IF D F A+
Sbjct: 117 LKEEGID---------IIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRKDKFFANAE 167
Query: 406 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHIKSILF 287
>gi|357512133|ref|XP_003626355.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Medicago truncatula]
gi|124360141|gb|ABN08157.1| 3-dehydroquinate dehydratase, putative [Medicago truncatula]
gi|355501370|gb|AES82573.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Medicago truncatula]
Length = 99
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 76/87 (87%), Gaps = 2/87 (2%)
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNF 424
PL GR+FV AG GAG+ALAFGAK+RGAR+VIFDIDF++++SLA V G + +++++NF
Sbjct: 9 PLDGRLFVRAG--GAGKALAFGAKTRGARIVIFDIDFDKSRSLACAVFGEVQSYKNLVNF 66
Query: 425 QPEKGAILANATPLGMHPNTDRVPVSE 451
QP KGAILANATP+GMHP+TDR+PV+E
Sbjct: 67 QPVKGAILANATPIGMHPDTDRIPVAE 93
>gi|206889174|ref|YP_002248270.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226697499|sp|B5YJ55.1|AROE_THEYD RecName: Full=Shikimate dehydrogenase
gi|206741112|gb|ACI20169.1| shikimate 5-dehydrogenase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 275
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 29/287 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G+ P+ H+ P++HN F ++ + YV V D LK+ + +
Sbjct: 2 ITGKTKIIGIFGDPIEHTLSPLIHNEAFSYLGLDYCYVAFNVKKDKLKEAVEAIRALNIR 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+KE V+++ DE+ + I AVNTI+ ++G L G+NTD I +++D
Sbjct: 62 GVNITVPHKETVIQYIDELSDEVKNIGAVNTILN--NEGILKGFNTDVNGFILSLKDE-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
G + + F++ GAGGA +A+ +G G +V I++ R S A +
Sbjct: 118 -----------GISMKNKNFLILGAGGAAKAIVYGILKEGGKVYIYN----RTPSNALAI 162
Query: 412 MGAARPFE--DILNFQP---EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ F +I+ EK ++ NAT LG+ + D +P++ E ++ + D VY
Sbjct: 163 KEKFKKFGFIEIVEMDKSVTEKIDVIVNATSLGLKKD-DPMPLNPELIKPEHVYCDIVYP 221
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+T L+++AE G +V G+ M L QA F ++T EAP E M++
Sbjct: 222 --ETPLMREAERIGCKVVGGIGMLLWQAAFAFKIWTEVEAPIEIMKK 266
>gi|337748424|ref|YP_004642586.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
gi|336299613|gb|AEI42716.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus KNP414]
Length = 299
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 150/294 (51%), Gaps = 23/294 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++G+ PV HSK P++ N F N Y + LK + + F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VM + DE+ A+ I AVNT++ G+LIGYNTD I ++++
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVN--EGGRLIGYNTDGIGYIRSLKE--- 126
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G L GR ++ GAGGA R + + GA + I + E+A LA
Sbjct: 127 ---------ETGIELKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 411 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ G + ++I + A++ N T +GM+PN D VP+ +R+ Q+V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELVGD-AALIVNNTLVGMYPNVDEVPMDISLIREDQVVSDLIYN 236
Query: 467 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL++A E GA + SG+ MF+ Q F +TG+ AP E MR+ VL F
Sbjct: 237 PLETRLLREAREMRGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|251780363|ref|ZP_04823283.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084678|gb|EES50568.1| shikimate dehydrogenase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 289
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F + + Y+ V + L+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPKMHNEAFAKLGLDYAYLAFEVGTEQLEDTIKGFRAMS 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V K+ D++ P A+ AVNT++ DG L G+ TD + A++DA
Sbjct: 63 VRGCNVSMPNKTVVHKYLDKLSPAAELCGAVNTVVN--DDGVLTGHITDGIGYMRALKDA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAK 405
G G+ + GAGGA A+ A G A + IF D F RA+
Sbjct: 121 -------------GINPIGKKMTIVGAGGAATAIEIQAALDGVAEISIFNRKDEFFARAE 167
Query: 406 SLASDV---MGAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEET-LRD 456
D+ D+ N K I NAT +GM P + + + + LR
Sbjct: 168 KTVKDINEKTNCKATLYDLANLDKLKEEIADSYLFTNATGMGMKPLEGKTYIPDSSFLRS 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY PR+T LL+ A G V+G+ M L Q F ++TGKE P E+M++I+
Sbjct: 228 DLIVSDVVYAPRETELLRMAREVGCKTVNGLGMMLFQGAAAFEMWTGKEMPIEYMKDIL 286
>gi|403384196|ref|ZP_10926253.1| shikimate dehydrogenase [Kurthia sp. JC30]
Length = 277
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 144/286 (50%), Gaps = 19/286 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K + +I P+ HS P++HN +G Y+P+ + ++L + F+ +GF+V
Sbjct: 3 KWYAVIGDPIEHSMSPLMHNTWMNAEERDGTYIPLHITKENLVEGFNGMKLLGCSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ D++ PLAQ + AVNT++R+ DG GYNTD + ++EDA+
Sbjct: 63 IPHKEAIIPLLDDIDPLAQKMGAVNTVVRQ-LDGTYKGYNTDGLGFVKSLEDAV------ 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS--DVMG 413
G+ + ++ GAGGA R + F G ++ I + +A+++ DV+
Sbjct: 116 ------GTHHKDKRVLVIGAGGASRGICFALAQEGYTKLSIANRTVAKAQAICDELDVVA 169
Query: 414 AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
A E+ E G I+ T G++ + +P+S E L + +V D VY P T L
Sbjct: 170 TAYSLEEAAASLDEFG-IIIQTTSAGLNNSAFSLPLSLEKLSNTAIVADIVYNPLMTPFL 228
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++ GA +V+G+ MF+ Q ++ + + ++ ++L +
Sbjct: 229 AQSQQKGATVVTGLGMFIHQGALAYSYWNDVYPTADTVKPVLLEQL 274
>gi|357010654|ref|ZP_09075653.1| shikimate 5-dehydrogenase [Paenibacillus elgii B69]
Length = 289
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 145/294 (49%), Gaps = 23/294 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++G+ P+ HSK PI+ N F N Y + LK + + F
Sbjct: 6 LDSHTILYGVFGDPIRHSKSPIMLNRAFEAAGINAAYGAFHILPGTLKDAVAGIRALQFR 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VM + DE+ A AI AVNTI+ G+LIGYNTD + ++ +
Sbjct: 66 GVNVTIPHKVEVMSYLDEIDEGAHAIGAVNTIVNE--GGRLIGYNTDGIGYMRSLREET- 122
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G L GR ++ GAGGA R + + GA + I + E+A LAS
Sbjct: 123 -----------GISLKGRKVLMIGAGGAARGVGYALAREGAEHIYIANRTKEKALDLASS 171
Query: 411 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ + ++I E A++ N T LGMHPN D VP+ +R +V D VY
Sbjct: 172 MSEFGSVSGHGLDEISKLAGE-AALIVNNTLLGMHPNVDEVPMDISLIRPETVVSDLVYN 230
Query: 467 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P TR L++A + GA+I SG+ MF+ Q F +TG+ AP MRE+V F
Sbjct: 231 PLITRFLREARDQRGAVIHSGLGMFIYQGAYAFEYWTGQPAPIAAMREVVEQSF 284
>gi|302418918|ref|XP_003007290.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
gi|327507675|sp|C9SE96.1|ARO1_VERA1 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|261354892|gb|EEY17320.1| pentafunctional AROM polypeptide [Verticillium albo-atrum VaMs.102]
Length = 1574
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 218/510 (42%), Gaps = 70/510 (13%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P + + + + +P++ R GG + +H + +L+
Sbjct: 1071 GSDAVELRVDLLQDQTPESVARQVSALRSAAGMPIIFTLRTVSQGGCFPDADHTQALSLY 1130
Query: 93 -LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLV---SR 148
LA +G +++D E+ +IL Q ++ G I++ + D G +R
Sbjct: 1131 ILALRMGVEFIDLEMTWPEHIL--QTVTNLKGRSRIIASHHDPRGELSWKNGSWTPFYNR 1188
Query: 149 MQATGADIIKLVF---SVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLL----SP 200
G+ +IKLV S+ D ++AR +L+ P+IA ++G G +S++L +P
Sbjct: 1189 ALQWGS-VIKLVGTAQSMEDNYDLARFKSDMLASHPTPVIALNMGALGKLSRVLNGFLTP 1247
Query: 201 KFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPT 260
+ AL + + G L E R + + +INA + F L KP+ S+ P LHN
Sbjct: 1248 VSHPALPFKAAPGQ----LSAAEIRRALFLLGNINAQS--FHLFGKPISKSRSPALHNSL 1301
Query: 261 FRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAV 320
F Y + D + + PDF G SV P K VM DEV A+ I AV
Sbjct: 1302 FNLTGLPHKYGLVETDQADEVAAVIREPDFGGASVTIPLKLDVMPLLDEVSESAKVIGAV 1361
Query: 321 NTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
NTII P DG +L+G NTD + +E + + ++ G+
Sbjct: 1362 NTIIPMPLDGSQKRRLLGDNTDWRGMVHCLESI-------GVASESTASTTTASALVIGS 1414
Query: 377 GGAGRALAFGAKSRGARVVI---------------FDIDFE-RAKSLASDVMGAARPFED 420
GG RA F KS G + F DF+ RA ++V A
Sbjct: 1415 GGTTRAAIFALKSHGYHPIYMLARNEQSLETIRASFPTDFDLRALGGPAEVFTLAVAPTV 1474
Query: 421 ILNFQPEKGAILANATPLGMHPNTD-------RVPVSEETLRDYQLVFDAVYTPRKTRLL 473
+++ P M P+ + PVSE+ R ++ + Y PR T +
Sbjct: 1475 VISTIPADKP---------MDPSLRETLEVVLKSPVSEQRTR---VLLEMAYQPRHTAAM 1522
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+ AE AG + G E+ Q QF ++TG
Sbjct: 1523 RLAEDAGWRTIPGAEVLAAQGWHQFQMWTG 1552
>gi|190347323|gb|EDK39572.2| hypothetical protein PGUG_03670 [Meyerozyma guilliermondii ATCC 6260]
Length = 1210
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 234/527 (44%), Gaps = 60/527 (11%)
Query: 26 LSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEG 82
+S+ +A G D VE+R+D + ++ + II +P++ R GG
Sbjct: 710 VSDKLEAVTAGCDAVELRVDLLEDYSSTFVAEQTAIIRKYLNIPIIFTVRTVSQGGKIPD 769
Query: 83 DEHKRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141
++ + +E L L A LG Y+D +L S + K S++ T+ I S + S ++
Sbjct: 770 EDLETIERLSLLAIKLGVVYLDLQLTYPSKTIDKILSANVF-TKIIASFHDPKREFSWKE 828
Query: 142 LGYLVSRMQAT--GADIIKLV---FSVNDITEIARIFQLLSHCQVPIIAYSVGERGLVSQ 196
+ QA GADI+KLV SV D ++ QL H P+IA ++GE+G +S+
Sbjct: 829 PEWDNRFQQAINIGADIVKLVGSAQSVQDNIDLESFRQL--HTSRPLIAINMGEQGKLSR 886
Query: 197 LLSPKFNGALVYGSLKGTPVLGLPTVESLRQ-TYKVEHINADTKVFGLISKPVGHSKGPI 255
+L+P + +L G TV + ++ ++A K F +I KP+ HS+ P
Sbjct: 887 VLNPVLT-PVTSDTLTEKAAPGQLTVSEINGIANQIGLLSA--KSFWVIGKPIQHSRSPP 943
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFST-YSSPDFAGFSVGFPYKEAVMKFCDEVHPLA 314
LHN ++ + + DD KK F DF G ++ P K +MK+ DE+ A
Sbjct: 944 LHNAGYKCLGLPHKFDRFESDDAKKVFEKLMKKSDFGGLAITMPLKLDIMKYVDELSEAA 1003
Query: 315 QAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGS-PLAGRMF 371
+ I AVNT+ +++ + +G NTD G N A FG+ + +
Sbjct: 1004 KTIGAVNTVCSVKKDNHQIFVGDNTDW-------------VGISNSFAKFGAYGSSTQCG 1050
Query: 372 VLAGAGGAGRALAFGAKSRGARVV---------IFDIDFERAKSL----------ASDVM 412
++ G GG RA F G + + + DI KSL + +++
Sbjct: 1051 LVVGGGGTSRAAVFALHQMGCKKIYMINRTASKVHDIK----KSLPEEYGIEVLDSEELV 1106
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
+A P ++ P I A L + T SE + + +A Y PR T +
Sbjct: 1107 NSAEPVTLAVSCIPADKPIEAQ---LLKYLETLLAKGSENSHGVTPTLLEAAYKPRVTPI 1163
Query: 473 LKDAEAA-GAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
++ A+ +V GVEM + Q QF L TG +AP + + V+A+
Sbjct: 1164 MELAQDKFKWTVVPGVEMLVHQGERQFELHTGFKAPYRVIYDAVVAE 1210
>gi|170078337|ref|YP_001734975.1| shikimate 5-dehydrogenase [Synechococcus sp. PCC 7002]
gi|169886006|gb|ACA99719.1| shikimate dehydrogenase [Synechococcus sp. PCC 7002]
Length = 287
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 29/292 (9%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSV 295
TK+ G+I PV HS PI+HN + + +Y+ P+ LK + + D GFS+
Sbjct: 7 TKLLGVIGDPVKHSFSPIMHNAAIAELGVDYVYLAFPVAAAALKAALDGFWAIDLQGFSI 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K+A+M + + P A+ + AVNT+ R + + G NTD + ++ ER +
Sbjct: 67 TIPHKQAIMAHLEAIAPEAELVGAVNTVWRTETGWQ--GTNTDVAGFVAPLQAL--ERDW 122
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGA 414
N T V+ G GGA RA+ G G ++ + D E+ +
Sbjct: 123 SNVTP-----------VILGNGGAARAVVVGCHQLGCPQIHVLGRDPEKLAQFSESWQNT 171
Query: 415 -------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLVFDAV 464
+ D P+ +L NATP+GM P D PVS+E + + + +D +
Sbjct: 172 PLAGKVQTHLWGDRQRLIPQ-AQLLINATPIGMFPKVDASPVSDELMANLPPGAIAYDLI 230
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
YTP T+ LK A+ GA I+ G EM ++Q + G+ P + MR+ +L
Sbjct: 231 YTPSPTQFLKQAQTQGAAIIDGSEMLVQQGAIALEKWLGQPVPVDTMRQALL 282
>gi|168209925|ref|ZP_02635550.1| shikimate 5-dehydrogenase [Clostridium perfringens B str. ATCC
3626]
gi|170711954|gb|EDT24136.1| shikimate 5-dehydrogenase [Clostridium perfringens B str. ATCC
3626]
Length = 271
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D ++A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKDKAFKKFEDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ D+ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGDLEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKNNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|89100813|ref|ZP_01173665.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89084459|gb|EAR63608.1| shikimate 5-dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 279
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 141/275 (51%), Gaps = 29/275 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+F +I P+GHS P +HN F + YVP+ V +DL + AGF+V
Sbjct: 3 KLFAVIGDPIGHSMSPAMHNDLFGIYGLDACYVPLKVRREDLGDAVKGLRAIGVAGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M F DE+ LA+AI AVNT++ + DGKLIGYNTD E GY
Sbjct: 63 VPHKTEIMPFLDEIDQLAEAIGAVNTVLNK--DGKLIGYNTDGE-------------GYV 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G AS + + ++AGAGGA +A+ + +G + ID + ++ +
Sbjct: 108 RGLASEVPDFSRKKILIAGAGGAAKAIYYTLAQKGVQA----IDICNRTAAKAEALADKC 163
Query: 417 PF---EDILNFQ--PEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
PF D L FQ EK A I+ TP+GM P+ + +P L+ V D +Y P
Sbjct: 164 PFPVRTDALGFQQAEEKLAEYDIIIQTTPIGMLPDVNALPFGLYNLKAGAFVSDIIYNPL 223
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+T+ L++A+ GA I +G++MF+ Q F +TG
Sbjct: 224 ETKFLREAKNKGASIQNGLKMFVCQGALAFERWTG 258
>gi|57640200|ref|YP_182678.1| shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
gi|73914165|sp|Q5JFT1.1|AROE_PYRKO RecName: Full=Shikimate dehydrogenase
gi|57158524|dbj|BAD84454.1| Shikimate 5-dehydrogenase [Thermococcus kodakarensis KOD1]
Length = 272
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 23/281 (8%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAG 292
+A+T+++G+I P HS P++HN FR + N +Y+ V ++L + + +G
Sbjct: 3 DAETRLYGVIGFPARHSLSPVMHNAAFRALGINAVYLAFEVPPEELGEAIGGAKALGISG 62
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
+V P+KEAV+ F D + + I +VNT++ R G+L G+ TD + A+E AI+
Sbjct: 63 LNVTMPHKEAVIHFLDSLSEDSGEIGSVNTVVNR--KGRLEGHTTDGLGARRALERAIE- 119
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-DV 411
L GR ++ GAGGAG+A+A+ SR VV+ + E+AK+L +
Sbjct: 120 -------------LGGRRILIIGAGGAGKAIAY-ELSRDNEVVVLNRTPEKAKALERFGI 165
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
G A E++ + E +L NAT +GM N+ PV E LR +V D VY P KTR
Sbjct: 166 TGDALNRENLGEYL-EWAEVLINATSVGM--NSWETPVPAELLRRDLVVMDIVYKPLKTR 222
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
LL +AE G V G+ M + Q I F L+TG + + MR
Sbjct: 223 LLTEAELRGCKTVDGLWMLVYQGIESFRLWTGFKPDEGLMR 263
>gi|188997216|ref|YP_001931467.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932283|gb|ACD66913.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 279
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 29/293 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ +T V+G+ PV HSK P F+H+ N +YVP V +D++K + D
Sbjct: 3 LDGNTLVYGIFGYPVKHSKSPTFQTAAFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE V+ + +E+ + I AVNTI + DG LIGYNTD
Sbjct: 63 GVNVTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDW------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ G +AG+ ++ GAGG+ RA+ +G ++GA ++ + + +RA++L D
Sbjct: 109 -YGFIEGLKEIMPDIAGKRVLVIGAGGSSRAIIYGLLNQGAGKIYLANRTIQRAENLIED 167
Query: 411 VMGAARPFEDI--------LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
R + I +N + ++ N T +G++ + + + V D
Sbjct: 168 FSNFYRIVKMIIKPISLEEINRILNEVELIVNTTSVGLNEDDPEI-FDYNLINSSHTVVD 226
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+Y ++T+LL+ A+ A +G M + Q F ++TGK AP E M++ +
Sbjct: 227 IIY--KETKLLRKAKEKNAKYQNGYPMLIYQGAKSFEIWTGKPAPIEVMKKAI 277
>gi|328949355|ref|YP_004366692.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
gi|328449679|gb|AEB15395.1| 3-dehydroquinate dehydratase [Treponema succinifaciens DSM 2489]
Length = 497
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 230/517 (44%), Gaps = 50/517 (9%)
Query: 13 ICAPLMAQSVEQVLS--NMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKP----LP 66
IC L +++ + L N Y++ D+ E+R+D +N +D + + P LP
Sbjct: 6 ICLTLTGKTLAEDLELLNKYRSYV---DMAELRVDFLN-----QDERLYARRFPSMAGLP 57
Query: 67 VLIVYRPKWAGGLY-EGDEHKRL---EALHLAEDLGAD---YVDFELKVASNILGKQYSS 119
++ R + GG + EG+ + + AL A++ YVDFE +I + ++
Sbjct: 58 CILTIRREIDGGKFVEGESARTILFARALSFADEDKTKNFAYVDFEEDF--HISSLEDAT 115
Query: 120 HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC 179
T+ I S + D + P L L + +G +I K+ F + + ++ +F+ S
Sbjct: 116 LAFETKVIRSFH-DMKNPVRNILERL-KELNPSGLEIPKIAFMPHSLDDVTNLFEQASKI 173
Query: 180 Q-VPIIAYSVGERGLVSQLLSPKFNGALVYGS----LKGTPVLGLPTVESLRQTYKVEHI 234
I ++G G+ +++L K L Y S ++ T + L Y+ + I
Sbjct: 174 SGNNHIMLAMGTMGIPTRVLGAKLKNFLTYTSAPESIQNTSNIAHLDAVKLGGLYRTKSI 233
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
N TK+FG+ P+ + P LHN + N +Y+P + ++ G S
Sbjct: 234 NESTKIFGITGWPLSGTSSPELHNTGYCRHGMNAVYIPFPAEKFEQAIDFSEQVGVQGLS 293
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+KEA + D V A I + NT+I++ DGK + YNTD E + A+ + + +
Sbjct: 294 VTVPHKEAALARADFVDNAALEIGSSNTLIKK--DGKWLAYNTDAEGFLKALLEFLNLKN 351
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS--DVM 412
K+ S + GAGGA +A+A+ + G + IF+ +AK LA D
Sbjct: 352 LKHKKIS-----------IIGAGGAAKAIAYAVYNSGGKACIFNRTLSKAKELAEKYDFK 400
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMH----PNTDRVPVSEETLRDYQLVFDAVYTPR 468
A FE + + I+ T GMH N + P+ + +FD +Y P+
Sbjct: 401 YAPLNFESVSTIRKYSDVII-QTTSKGMHCEEPSNPENDPLYFYDFTGKEALFDIIYMPK 459
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
T ++ A AG I +G M L Q QF L+TG E
Sbjct: 460 ATPIMVRAREAGCKICNGFSMLLYQGYRQFELYTGVE 496
>gi|415885593|ref|ZP_11547521.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
gi|387591262|gb|EIJ83581.1| shikimate 5-dehydrogenase [Bacillus methanolicus MGA3]
Length = 279
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 31/289 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+ HS P++HN F + Y P V DL + + +GF+V
Sbjct: 3 KLFGVIGDPISHSMSPVMHNDLFMVYGIDAHYHPFHVKRGDLGAAVQGLKAINCSGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M F DE+ PLA+AI AVNT++ +GKLIGYNTD + ++ +
Sbjct: 63 VPHKTEIMTFLDEIDPLAEAIGAVNTVVHE--EGKLIGYNTDGHGFLEGLK--------R 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASDVMGAA 415
T S + + ++ GAGGA +A+ + G + IDF R A+ ++ +
Sbjct: 113 KFTVSDSTKV-----LIIGAGGAAKAIFYSMAHAGVK----HIDFCNRTAEKAAQLIESC 163
Query: 416 RPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
PF N + A ++ T +GM PN D P+S E L V D +Y P
Sbjct: 164 -PFTVQSNIYTREEAEKRLSSYNLIIQTTSVGMSPNIDDSPLSLENLGTGAFVSDIIYNP 222
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+T +L+DA+ GA +G++MF+ Q F +TG M++ VL
Sbjct: 223 LETAILRDAKRRGAGTQNGLDMFVFQGALAFEKWTGIFPDTVRMKQNVL 271
>gi|288800100|ref|ZP_06405559.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
gi|288333348|gb|EFC71827.1| shikimate dehydrogenase [Prevotella sp. oral taxon 299 str. F0039]
Length = 247
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 28/268 (10%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGFPY 299
+GLI +GHS N F++ N + +Y+ + +++ F +S PD G +V PY
Sbjct: 4 YGLIGLKLGHSFSLNYFNEKFKNENIDAVYINYEISNIQDIFEIIASNPDLKGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
KE ++ + DEV P A AI AVN II + + L G+N+D +IE + ER +K
Sbjct: 64 KEQIIPYLDEVTPEATAIGAVNVVKIIHQENKTILKGFNSDVVGFTQSIEPLL-ERVHKK 122
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
++ G GG+ +A+AFG +S G V+ R + A
Sbjct: 123 A-------------LILGTGGSAKAIAFGLESLGLEVLFVS----RTPQV------NAIT 159
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKDA 476
+ ++ ++ ++ N TPLGM+PN+D P + E + L++D +Y P +T +K
Sbjct: 160 YNEVTEATIKEYKVIVNCTPLGMYPNSDSYPELPYEAMDSSHLLYDLIYNPNETTFMKKG 219
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
GA + +G+EM L QA + + GK
Sbjct: 220 AMHGATVKNGLEMLLLQAFVSWEYWHGK 247
>gi|256851823|ref|ZP_05557211.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 27-2-CHN]
gi|260661916|ref|ZP_05862826.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 115-3-CHN]
gi|297205445|ref|ZP_06922841.1| shikimate 5-dehydrogenase [Lactobacillus jensenii JV-V16]
gi|256615781|gb|EEU20970.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 27-2-CHN]
gi|260547385|gb|EEX23365.1| shikimate 5-dehydrogenase [Lactobacillus jensenii 115-3-CHN]
gi|297150023|gb|EFH30320.1| shikimate 5-dehydrogenase [Lactobacillus jensenii JV-V16]
Length = 307
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
++ T + GL++ P+ HS P +HN F + N Y+ +D+ L K + D
Sbjct: 16 LDGHTYLIGLMAYPIRHSMSPTMHNNAFAKLGLNFTYLCFEIDNKKLPKAVEAIRTLDMR 75
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P K+ V+K+ D++ P ++ AVNTI+ +G L GY TD + ++ED
Sbjct: 76 GSNVSMPNKKEVIKYLDKLSPASEMCDAVNTIVN--DNGVLTGYTTDGIGFMKSLEDE-- 131
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
G + G+ LAGAGGA +A A G + + IF+++ ++ +
Sbjct: 132 -----------GIDIRGKKMCLAGAGGAATPIAVQAALDGVSEIEIFNLNDDKWSQAEKN 180
Query: 411 V---------MGAARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPVSEET-LRDYQ 458
V + ED +F+ + I +AT +GM P D V + + +
Sbjct: 181 VKTINEKTNCKASLHHLEDKDDFKRAISECDIYCDATGVGMKPLEDMTLVEDPSWFHEDM 240
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VFD VY PR T+L+K A+ AG +++G+ M + Q F L+TG++ P +++R+++
Sbjct: 241 TVFDTVYAPRTTKLMKVAQKAGVKHVLNGIGMMIEQGAAAFKLWTGEDMPTDYIRQVIF 299
>gi|410466400|ref|ZP_11319313.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409980778|gb|EKO37456.1| shikimate 5-dehydrogenase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 274
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVG 296
++FG+I P+GH+ P++HN F + Y P ++L F AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEELPAFMERLRQTPIAGVSVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA-IEDAIKERGY 355
P+K AVM F DEV L QA AVNT+ R DG+LIG NTD E + I R
Sbjct: 62 IPHKTAVMAFVDEVSELGQAAGAVNTLYWR--DGRLIGDNTDVEGFCRPLVMRGIAPRRA 119
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
A + A +G G +R FE+A++LA + A
Sbjct: 120 LVLGAGGAARAAVLGLTRLDSG------VVGVTAR---------RFEQAQALAREFGVLA 164
Query: 416 RPFEDILNFQPEKGAI----LANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPRKT 470
P++ E+GA L NATP+GM + V P + L + FD VY P +T
Sbjct: 165 VPWD-------ERGAFGADFLTNATPMGMAGRFEGVSPYPAQALSPGMVAFDLVYNPYET 217
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
RL DA AAG +V G+EMFL QA+ QF L+TG+ P + +R ++L
Sbjct: 218 RLAADAAAAGGTVVPGLEMFLYQAVEQFRLWTGRLLPDDELRPLLL 263
>gi|420177912|ref|ZP_14684246.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
gi|420181401|ref|ZP_14687602.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394246317|gb|EJD91577.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM053]
gi|394247099|gb|EJD92347.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM057]
Length = 269
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 139/287 (48%), Gaps = 32/287 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLESTYEAINVPFNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAK--SLASDVM 412
NG + ++ GAGGA + +A K + I + R SL S+ +
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTITIANRTMSRFNNWSLNSNKI 164
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
+ + F I+ N TP GM+ N D V +S L + LV D VY P KT +
Sbjct: 165 NLSHAERHLDEFD-----IIINTTPAGMYGNKDSV-ISLNRLASHTLVSDIVYNPYKTPI 218
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L +AE G I +G++MF+ Q F ++T E E M+ +V+ +
Sbjct: 219 LIEAEQKGNPIYNGLDMFVHQGAESFKIWTNLEPDIEAMKNVVIHEL 265
>gi|331266124|ref|YP_004325754.1| shikimate 5-dehydrogenase [Streptococcus oralis Uo5]
gi|326682796|emb|CBZ00413.1| shikimate 5-dehydrogenase [Streptococcus oralis Uo5]
Length = 284
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++KP+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVAKPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ F DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVLPFLDELSDEARLIGAVNTVVNH--NGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF ++G+ + GAGGA R++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TISGKKMTILGAGGAARSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q + K +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDLSELQEKIAKADLLVNATSVGMDGKSSPVPESI-VLPEALLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|417907932|ref|ZP_12551699.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
gi|341595019|gb|EGS37697.1| shikimate dehydrogenase [Staphylococcus capitis VCU116]
Length = 269
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 135/282 (47%), Gaps = 22/282 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
F +I P+ HS PI+H+ F +++ N Y P+ + D+ + +GF+V P
Sbjct: 3 FAVIGHPISHSLSPIMHSANFSNLSLNYTYEPLDIPIDEFHLLRDIITEKKLSGFNVTIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE ++ + EV ++ + AVNT++ R DGK IGYNTD GY G
Sbjct: 63 HKERIIPYLYEVDEQSKTVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 417
L ++ GAGGA + +A K ++ I + R + D+ A
Sbjct: 108 LKQIYDDLKNAYILILGAGGASKGIANELTKFVEPKLTIANRTMSRFEDWNLDI--NAIS 165
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
D + E I+ N TP GM N D V ++ L + LV D VY P KT +L +AE
Sbjct: 166 LNDAEKYLDEFD-IVINTTPAGMDKNNDSV-INLRNLSPHTLVSDIVYIPYKTPILLEAE 223
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+ G I +G++MF+ Q F ++TG++ + M+ VL K
Sbjct: 224 SKGNPIYNGLDMFVYQGAESFKIWTGEQPNIQIMKNTVLDKL 265
>gi|327507649|sp|C5G8R4.1|ARO1_AJEDR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239607236|gb|EEQ84223.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ER-3]
Length = 1597
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 221/518 (42%), Gaps = 72/518 (13%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGELSWANGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV + + A + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + +K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKSKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
HN FR + IY + +D +KKF SPDF G S+ P K +M DE+ P
Sbjct: 1310 HNALFRQMGLPHIYGTLETEDPEIVKKFIR---SPDFGGASITIPLKLDIMPLLDEIAPE 1366
Query: 314 AQAIAAVNTIIRRP-------SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
A +I AVNTI+ P +LIG NTD + + + DA G +P
Sbjct: 1367 AVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--------GAYPAATPT 1418
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVM--GAARPFEDILN 423
++ G GG RA F +S G + + + ++ S+ S R ED+
Sbjct: 1419 TTSAGLVIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMTSTFAPDHDIRILEDVKA 1478
Query: 424 F-----------------QPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVFDAV 464
+P IL L N+D +E+ + +++ +
Sbjct: 1479 LESLPTVAIGTIPGDKPIEPHMREILCELFDLCEKANSD----AEQARGISTKRILLEMA 1534
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
Y P T L++ A +G ++ G+E + Q + Q +T
Sbjct: 1535 YKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWT 1572
>gi|414154642|ref|ZP_11410959.1| Shikimate dehydrogenase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453473|emb|CCO08863.1| Shikimate dehydrogenase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 294
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 23/298 (7%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
+ IN TKV GL PV HS P +HN + + N +YVP V + L++ +
Sbjct: 3 LPEINGKTKVCGLFGWPVEHSFSPAMHNAAYAGLGLNWVYVPYSVPPNCLRQAVEGMRAL 62
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
AG +V P+K++++ D+V A+ + AVNT+ R GKL+GYNTD I
Sbjct: 63 GLAGANVTVPHKQSIIPLLDKVDTAARIMGAVNTV--RLEQGKLVGYNTDGPGFIQ---- 116
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 408
+ A+F SP R+ ++ G A A + A + I + E+A+ LA
Sbjct: 117 ------FLAAEANF-SPQGKRVLLVGAGGAARAVAVALAGAGAAAIYITNRTPEKAEQLA 169
Query: 409 SDVMGAARPFEDILNFQPE-KGAILA------NATPLGMHPNTDRVPVSEET-LRDYQLV 460
DV A + +L + + G ++A TPLGM +D+VP T L+ QLV
Sbjct: 170 RDVAQAGQLTTRVLPWGRQLPGTVVAEVDLVIQTTPLGMGARSDQVPEFPFTALQPGQLV 229
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
D +Y P +T L+ A A GA + +G+ M L Q + F L+TG AP MRE +L +
Sbjct: 230 CDLIYNPNRTLFLQMAAARGATVFNGLGMLLYQGVLAFELWTGLPAPVAIMREALLKQ 287
>gi|168213889|ref|ZP_02639514.1| shikimate 5-dehydrogenase [Clostridium perfringens CPE str. F4969]
gi|170714608|gb|EDT26790.1| shikimate 5-dehydrogenase [Clostridium perfringens CPE str. F4969]
Length = 271
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|359410713|ref|ZP_09203178.1| Shikimate dehydrogenase [Clostridium sp. DL-VIII]
gi|357169597|gb|EHI97771.1| Shikimate dehydrogenase [Clostridium sp. DL-VIII]
Length = 270
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
+GL + + HS P +HN F+ N G Y V ++L K G +V P
Sbjct: 4 YGLFGEKLSHSLSPKIHNNFFKASNIEGAYKLFEVKKEELGKAVEAIKVLKVKGVNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK+ VMK+ D + AQ I A+NTI +GKL GYNTD T I KN
Sbjct: 64 YKQDVMKYLDFISEEAQKIGAINTI--HLDNGKLYGYNTDYFGFGTII---------KNN 112
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA--- 415
+ +A ++ G GGA +A+ +G + + R KS++SD
Sbjct: 113 SIEIKDNIA----MVLGNGGAAKAVITYLLDQGIKKIYL---VSRRKSISSDYNDEKIEI 165
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ +E+I + KG IL N TPLGM+PN D PV E+ + ++ + D +Y P++T+ LK
Sbjct: 166 KTYEEIGDI---KGDILINTTPLGMYPNVDATPVDEDIINNFNTLIDIIYNPKETKFLKI 222
Query: 476 AEAAGAIIVSGVEMFLRQAI 495
+ + G+EM + QAI
Sbjct: 223 GKKLSKKVCGGIEMLIGQAI 242
>gi|87123368|ref|ZP_01079219.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
gi|86169088|gb|EAQ70344.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. RS9917]
Length = 306
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 139/313 (44%), Gaps = 37/313 (11%)
Query: 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTY 285
T K NA T + GL+ PV HS P++HN + N I++ P +DL+
Sbjct: 6 TAKPTTANAQTALVGLLGDPVHHSLSPVMHNAALEAMGLNWIFLALPTPANDLETVVRGL 65
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
+ G +V P+K +V+ C E+ PLAQ + AVN ++ R DG G NTD E I
Sbjct: 66 RAVGCRGLNVTIPHKHSVVPLCAELSPLAQRLGAVNALVPR-VDGGWFGTNTDVEGFIAP 124
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK 405
+ +A + GR ++ G GG+ RA+ S G + I R
Sbjct: 125 LREAQSD-------------WQGRRALVLGCGGSARAIVAAITSLGCDQI--QIAGRRPD 169
Query: 406 SLAS--DVMGAARPFEDILNFQPEKGA--------ILANATPLGMHP--NTDRVPVSEET 453
+LA+ GA P L++ + ++ N TPLGM N D V S +
Sbjct: 170 ALAAFQQDCGAWAPSLTGLDWHHQAALEQALEAADLVVNTTPLGMASTHNPDAVLASPLS 229
Query: 454 LRDYQ------LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EA 506
D Q V+D +YTPR TRLL DA A G + G+EM ++Q L++ + +
Sbjct: 230 PGDIQRLKPECWVYDIIYTPRPTRLLTDAAAHGCRTLDGLEMLVQQGAAALRLWSERSDV 289
Query: 507 PKEFMREIVLAKF 519
P MR A
Sbjct: 290 PVAVMRHAAEAAL 302
>gi|422873291|ref|ZP_16919776.1| quinate/shikimate dehydrogenase [Clostridium perfringens F262]
gi|380305676|gb|EIA17953.1| quinate/shikimate dehydrogenase [Clostridium perfringens F262]
Length = 271
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|418018195|ref|ZP_12657751.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
gi|345527044|gb|EGX30355.1| shikimate 5-dehydrogenase [Streptococcus salivarius M18]
Length = 285
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ +++ P+ HS P +HN F NG+YV + DL + D
Sbjct: 2 QIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYKEAV+ F DE+ P AQ I AVNT++ DG+LIG+NTD ++++
Sbjct: 62 FGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVN--CDGRLIGHNTDGFGFFASLKNF- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL 407
SP + +L GAGGA +A+ A GA+ V + ++AK
Sbjct: 119 -------------SPKDAHLMIL-GAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKES 164
Query: 408 ASDVMGAA------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQL 459
++ D+ F+ E G +L NAT +GM + +P + + L
Sbjct: 165 FKSLLEQRTCHLEFHALNDLKYFKEELGQADLLVNATSVGMDGASLPIPTDTKFPKGL-L 223
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T L A G V+G+ M L QA G F L+TGK+ P +
Sbjct: 224 VADIIYQPFETPFLALARKQGIGAVNGLGMLLHQAAGAFKLWTGKDMPTD 273
>gi|422939616|ref|ZP_16966993.1| shikimate dehydrogenase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339890522|gb|EGQ79635.1| shikimate dehydrogenase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 288
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T + GLI P+ HS+ P +HN F + + +Y+ V +LK +
Sbjct: 5 IQGTTGLIGLIGDPLKHSRSPHMHNSAFDKLGLDYVYLCFEVPKGELKSGIEALKTFSAK 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ FP+K+ V+K+ D++ A+ I +VNTI P K+ GYNTD I ++++
Sbjct: 65 GSNITFPHKQEVLKYLDDISEDAKIIGSVNTIKIDPETKKITGYNTDGRGFIASLDE--- 121
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
P + VL G GGAGRA+A G + E K LA+++
Sbjct: 122 ----------LNIPFRKQKVVLIGVGGAGRAIAIQLAYEGVGELCIK---ELNKDLANEI 168
Query: 412 MGAARPF------------EDILNFQPEKGAILANATPLGMHPNTDRVPVS-EETLRDYQ 458
E+ L + + +L NATPLGM + +S E L
Sbjct: 169 KETINKHIPNVNVKILADDEETLKEELKDACLLVNATPLGMKGRENLCVISGPEVLHKDL 228
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
V+D VY PR+T L+K A+ AG +G+ M + Q F ++ + P++++R+ + K
Sbjct: 229 FVYDIVYDPRETLLMKYAKQAGCKTTNGINMMIWQGAIAFKIWFDIDMPQDYVRQELFEK 288
>gi|18309682|ref|NP_561616.1| shikimate 5-dehydrogenase [Clostridium perfringens str. 13]
gi|24211457|sp|Q8XMI8.1|AROE_CLOPE RecName: Full=Shikimate dehydrogenase
gi|18144359|dbj|BAB80406.1| shikimate 5-dehydrogenase [Clostridium perfringens str. 13]
Length = 271
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+ I AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKVIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|15613887|ref|NP_242190.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
gi|20137510|sp|Q9KD93.1|AROE_BACHD RecName: Full=Shikimate dehydrogenase
gi|10173940|dbj|BAB05043.1| shikimate 5-dehydrogenase [Bacillus halodurans C-125]
Length = 278
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
K+FGL+ PVGHS P++HN F+ ++++G Y V+ L+K + GF+V
Sbjct: 3 KLFGLLGHPVGHSLSPLMHNQMFQLLDFDGYYHAFDVEPSQLEKAVEGARALQMQGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +M + D V AQ I AVNT++ + DG+L G NTD + + ++ D +
Sbjct: 63 IPHKVTIMDYLDMVDEEAQEIGAVNTVVMK--DGQLFGSNTDGQGYLESLMDVVT----- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
+P + ++ GAGGA RA+ K R + ++A+ + A
Sbjct: 116 -------TPFPTQDVLIIGAGGAARAIGTVLKREKVRSI----------TIANRTLAKAE 158
Query: 417 PFEDILNF---------------QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
F +L Q E+ +++ N T +GM P D +P+S E L +V
Sbjct: 159 EFSGVLESSETSCSALSLKEAEQQLERFSVIINTTSVGMSPRVDDMPLSLERLSRETVVS 218
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T+ L++A+ GA V G+ MF+ Q F L+TG +E MR VL +
Sbjct: 219 DLIYNPLETKFLREAKQKGAKTVDGLGMFVNQGALAFELWTGLRPDREKMRRCVLEQL 276
>gi|428780823|ref|YP_007172609.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
gi|428695102|gb|AFZ51252.1| shikimate 5-dehydrogenase [Dactylococcopsis salina PCC 8305]
Length = 325
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 34/296 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++ N + + +YVP+ V DL + + +++ D
Sbjct: 24 ITGKTKLLGVIGDPVEHSLSPVMQNAALNELGLDYVYVPLPVKKGDLNRALAGFTAIDLV 83
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ D + P AQ + AVNT+ R ++ G NTD + I +
Sbjct: 84 GFNATIPHKQAIIPLLDRITPEAQKVGAVNTVWR--TEKGWEGTNTDVDGFIAPLIPL-- 139
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKS---- 406
+R + M V+ G GGA RA+ G + G ++V + + E+ +
Sbjct: 140 DRDWSQ-----------VMPVILGNGGAARAVIVGCEKLGCSKVAVVGRNREKLEQFQRS 188
Query: 407 -----LASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DYQ 458
L +++ ++D+ N + +L N TP+GM P + PV L+ +
Sbjct: 189 WEETGLKTEI--CPYSWQDLPNLLSQT-QLLVNTTPIGMSPQIESSPVEATALKHLPNGA 245
Query: 459 LVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+V+D +YTPR TR L+ A+ G + G+EM ++Q + + P E MRE
Sbjct: 246 IVYDLIYTPRPTRFLQLAQQLGEYTTIDGLEMLIQQGAIALETWLEQPIPIEVMRE 301
>gi|392407617|ref|YP_006444225.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
gi|390620753|gb|AFM21900.1| shikimate dehydrogenase [Anaerobaculum mobile DSM 13181]
Length = 290
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFA 291
N DT+ L P+ + P+LHN F N +Y P+ + DDL K T +
Sbjct: 5 NVDTRFIALYGNPLKQTLSPLLHNTVFESKKMNNLYYPLEIQSFDDLSKALKTMHVFNVI 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKE V++ D + A+ AVNT++ ++ LIGYNTD + + +
Sbjct: 65 GANVTMPYKEKVIELLDGLDKSAEQCGAVNTVVT--TEKGLIGYNTDGMGFLNSFME--- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
F G+ F+L GAGGA +A+ F + G ++V++++ RA SL
Sbjct: 120 ---------EFNVSPEGKTFLLIGAGGAAKAVVFAFLNAGVSKVIVYNNSQTRAMSLLER 170
Query: 411 V------MGAARPFEDILNFQP------EKGAILANATPLGMHPNTD-RVPVSEETLRDY 457
V RP LN +P + I+ NAT +GM + + V ++ R
Sbjct: 171 VEKFFPGKCEWRP----LNNKPVPPEGIAEADIIINATKVGMKGEAEGQSLVLPDSFRPG 226
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
Q V D VY P +T+LL DA+ AG I+SG M + QA F L+ G ++ E M+
Sbjct: 227 QFVCDVVYNPPETKLLADAKKAGCKILSGDGMLVYQAAAAFKLWFGIDSDVELMK 281
>gi|306521064|ref|ZP_07407411.1| shikimate 5-dehydrogenase [Clostridium difficile QCD-32g58]
Length = 273
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 139/283 (49%), Gaps = 31/283 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T +F LI PVGHSK P+++N +F+ ++ + Y+ + VD +K+ + +
Sbjct: 2 EISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNI 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K AV ++ DE+ P A+ I A NTI+ +GKL+G+ TD
Sbjct: 62 KGANVTMPCKSAVTEYMDELSPAARIIGACNTIVN--DNGKLVGHITD------------ 107
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI--DF-----E 402
GY G + G+ + GAGGA A+ GAR + IF+ DF +
Sbjct: 108 -GVGYVRNLKENGIEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQ 166
Query: 403 RAKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+++ DV D+ L + E IL NAT +GM P + + + + LR
Sbjct: 167 TVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFN 499
+V D VY P+KT++++DAEA G + G+ M L Q FN
Sbjct: 227 DLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFN 269
>gi|223933656|ref|ZP_03625634.1| shikimate 5-dehydrogenase [Streptococcus suis 89/1591]
gi|302023999|ref|ZP_07249210.1| shikimate 5-dehydrogenase [Streptococcus suis 05HAS68]
gi|330833048|ref|YP_004401873.1| shikimate 5-dehydrogenase [Streptococcus suis ST3]
gi|386584438|ref|YP_006080841.1| shikimate 5-dehydrogenase [Streptococcus suis D9]
gi|223897686|gb|EEF64069.1| shikimate 5-dehydrogenase [Streptococcus suis 89/1591]
gi|329307271|gb|AEB81687.1| shikimate 5-dehydrogenase [Streptococcus suis ST3]
gi|353736584|gb|AER17593.1| shikimate 5-dehydrogenase [Streptococcus suis D9]
Length = 289
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D++ A+ I AVNT+I + DGKLIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDDLTASARLIGAVNTVIHK--DGKLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 406
+ +G++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 RLKGFQ---------VKNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 407 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 457
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVPMQVLALDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
LV D +Y P +T LLK A++ G ++G+ M L QA F +TGKE P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQAWTGKEMPTDLIWDQLVQ 284
Query: 518 KF 519
K+
Sbjct: 285 KY 286
>gi|27468200|ref|NP_764837.1| shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
gi|32129422|sp|Q8CP09.1|AROE_STAES RecName: Full=Shikimate dehydrogenase
gi|27315746|gb|AAO04881.1|AE016748_115 shikimate dehydrogenease [Staphylococcus epidermidis ATCC 12228]
Length = 272
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 6 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 62
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 63 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 107
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 411
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 108 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 167
Query: 412 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 168 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 219
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 220 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 268
>gi|427736701|ref|YP_007056245.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
gi|427371742|gb|AFY55698.1| shikimate dehydrogenase [Rivularia sp. PCC 7116]
Length = 290
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 35/298 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I +TK+ G+I PV HS P++HN + + +Y+P ++ +L +++
Sbjct: 2 ITGNTKLLGVIGHPVEHSLSPLMHNAALEKLRLDYVYLPFPIEPQNLATALDGFAAIGVV 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+ P+K+A++ + P+A+A+ AVNT++R+ D K IG NTD E I ++ +
Sbjct: 62 GFNATIPHKQAIVPKLSNIEPIARAVGAVNTVVRK--DDKWIGTNTDVEGFIAPLQSLDR 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ N ++ G GGA RA+ G G A V + + ++ +
Sbjct: 120 DWSQTNA-------------LVLGNGGAARAVVAGCTQLGCASVRVVGRNLQKLEEFRDS 166
Query: 411 VMGAARPFEDI-LNFQ-------PE---KGAILANATPLGMHPNTDRVPVSEET---LRD 456
+ P + +N Q PE + +L N TP+GM+P D P++ + L
Sbjct: 167 WQDS--PLSPLKVNVQVHEWGYIPEIIKEANLLINTTPIGMYPKIDNSPINADLFLHLPK 224
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
+V+D +YTP T+ L+ A+ A + G+EM ++Q ++ +E P + MR+
Sbjct: 225 DTIVYDLIYTPSPTKFLQYAQQADKTAIDGLEMLVQQGAAALKIWLRRETVPVDVMRK 282
>gi|327351195|gb|EGE80052.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 1597
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 215/517 (41%), Gaps = 70/517 (13%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGELSWANGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV + + A + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + +K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKSKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
HN FR + Y + +D +KKF SPDF G S+ P K +M DE+ P
Sbjct: 1310 HNALFRQMGLPHTYGTLETEDPEIVKKFIR---SPDFGGASITIPLKLDIMPLLDEIAPE 1366
Query: 314 AQAIAAVNTIIRRP-------SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
A +I AVNTI+ P +LIG NTD + + + DA G +P
Sbjct: 1367 AVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--------GAYPAATPT 1418
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQP 426
++ G GG RA F +S G + R+ S +M P DI +
Sbjct: 1419 TTSAGLVIGGGGTARAAIFALQSMGYSPIYV---VGRSPDKLSSMMSTFAPDHDIRILED 1475
Query: 427 EKGAILANATPLGMHPNTDRV-PVSEETLRDY--------------------QLVFDAVY 465
K +G P + P E L + +++ + Y
Sbjct: 1476 VKALESLPTVAIGTIPGDKPIEPHMREVLCELFDLCEKANSDAEQARGISTKRILLEMAY 1535
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
P T L++ A +G ++ G+E + Q + Q +T
Sbjct: 1536 KPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWT 1572
>gi|325262925|ref|ZP_08129661.1| shikimate dehydrogenase [Clostridium sp. D5]
gi|324032019|gb|EGB93298.1| shikimate dehydrogenase [Clostridium sp. D5]
Length = 276
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 22/268 (8%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
FG++ +GHS P +H R N G Y + ++ + + G +V P
Sbjct: 11 FGVLGNQLGHSLSPEIHEDLLRQQNICGTYKKYELNENEAPHILEVMKAENIRGMNVTMP 70
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE + + D + P A+ I AVNTI+ + DGK GYNTD +++ +K+G
Sbjct: 71 YKEVIYQLMDVLDPHAEKIGAVNTILMK--DGKFYGYNTDYIGAVSMF--------HKDG 120
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
+ LAGR V+ G+GGA + L +G GA + E+A + P+
Sbjct: 121 VS-----LAGREIVILGSGGAAKGLIYGFHMDGAAKITVAARNEKAIEYLEERF----PY 171
Query: 419 EDILNFQP-EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
+ G IL N TPLGM+P+ PV +R +++ D VY P T L+ A+
Sbjct: 172 IHTCSLTDIPAGDILVNTTPLGMYPHIGESPVDVSVIRQFKVASDIVYNPLITEFLRIAK 231
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
G IV+G+ M + QAIG ++ K+
Sbjct: 232 EEGLQIVTGLMMLVDQAIGSEEIWLDKK 259
>gi|379723334|ref|YP_005315465.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
gi|378572006|gb|AFC32316.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus 3016]
Length = 302
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++G+ PV HSK P++ N F N Y + LK + + F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VM + DE+ A+ I AVNT++ G+LIGYNTD I ++++
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVN--EGGRLIGYNTDGIGYIRSLKE--- 126
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G L GR ++ GAGGA R + + GA + I + E+A LA
Sbjct: 127 ---------ETGIELKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 411 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ G + ++I + A++ N T +GM+PN D VP+ +R+ +V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELAGD-AALIVNNTLVGMYPNVDEVPMDISLIREDHVVSDLIYN 236
Query: 467 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL++A E GA + SG+ MF+ Q F +TG+ AP E MR+ VL F
Sbjct: 237 PLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|229597718|pdb|3DON|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis
gi|229597719|pdb|3DOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From
Staphylococcus Epidermidis Complexed With Shikimate
Length = 277
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 411
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 412 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|239905373|ref|YP_002952112.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
gi|239795237|dbj|BAH74226.1| shikimate dehydrogenase [Desulfovibrio magneticus RS-1]
Length = 274
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVG 296
++FG+I P+GH+ P++HN F + Y P +DL F AG SV
Sbjct: 2 QLFGIIGHPLGHTLSPLVHNWGFSRYGLDARYEAWPTPPEDLPAFMERLRQTPIAGASVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA-IEDAIKERGY 355
P+K AVM F DEV L QA AVNT+ R DG+L+G NTD E + I R
Sbjct: 62 IPHKTAVMAFVDEVTDLGQAAGAVNTLYWR--DGRLVGDNTDVEGFCRPLVMRGIAPRRA 119
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
A + A +G G +R FE+A++LA + A
Sbjct: 120 LVLGAGGAARAAVLGLTRLDSG------VVGVTAR---------RFEQAQALAREFGVLA 164
Query: 416 RPFEDILNFQPEKGAI----LANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPRKT 470
P++ E+GA L NATP+GM + V P + L + FD VY P +T
Sbjct: 165 VPWD-------ERGAFGADFLTNATPMGMAGRFEGVSPYPAQALAPGVVAFDLVYNPYET 217
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
RL DA AAG +V G+EMFL QA+ QF L+TG+ P + +R ++L
Sbjct: 218 RLAADAAAAGGTVVPGLEMFLYQALEQFRLWTGRLLPDDELRSLLL 263
>gi|407462089|ref|YP_006773406.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
gi|407045711|gb|AFS80464.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus koreensis AR1]
Length = 273
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K F +I P+ HS P +H+ FR +N + Y+ + ++L + GF+V
Sbjct: 3 KTFAVIGDPIDHSLSPNIHSAAFRELNLDCSYIAYRIPKEELGEGIEGLKKIKINGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +MK+ D++ I AVNT++ +DG L GYNTD + + + +K+R
Sbjct: 63 IPHKVEMMKYLDKIDESCSLIGAVNTVVN--NDGILKGYNTDMDGFL----EPLKKRNV- 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSL---ASDVM 412
+A +L GAGGA RA+ G AK + + I + E+A SL A +
Sbjct: 116 --------DIANSNVLLLGAGGAARAIVAGFAKEKAKSITIANRTIEKANSLVEFAQKIS 167
Query: 413 GAARPFE-DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+A D + + I+ NAT +G+ + P+S E + +V+D VY P T
Sbjct: 168 LSANAITVDKVGESAKNYNIIVNATSIGLK--NESSPISLEGIDKETVVYDIVYMPMHTD 225
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
LK A+ AI++ G EM L QA F ++ G EAP M++ +L
Sbjct: 226 FLKKAKEKNAIVIFGYEMLLGQAARAFEIWHGMEAPYNAMKKALL 270
>gi|194476868|ref|YP_002049047.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
gi|171191875|gb|ACB42837.1| shikimate / quinate 5-dehydrogenase [Paulinella chromatophora]
Length = 304
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 48/313 (15%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSV 295
T + G++ PV HS PI+HN + + N +Y+P+ +++ L+ S+ D GF++
Sbjct: 7 TALVGILGNPVSHSLSPIMHNAALKSLGLNWLYIPLPINNTSLEILVQNLSNIDCRGFNI 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRP-SDGKLIGYNTDCEASITAIEDAIKERG 354
P+KE + + E+ P+A+ + AVNT IR P ++ +G NTD E G
Sbjct: 67 TIPHKEIIAQLATELTPIAKRVGAVNTFIREPNTNNGWLGTNTDVE-------------G 113
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDI----DF-ERAKS 406
+ N + L+ + V+ G GG+ RA+ G RV+ DI F + +
Sbjct: 114 FINSLKNNHINLSQKRAVILGCGGSARAILVALVELGVASIRVIGRDIYKLTKFTDNYQY 173
Query: 407 LASDVMGAA-----------RPFEDILNFQPEKGAILANATPLGM-----HPNTDRVPVS 450
L D+ + FE L ++ N TP+GM + P++
Sbjct: 174 LHPDLSAVTWNETESKELELKLFEKTL----TNADLIVNTTPIGMTNVSISSSALLSPLT 229
Query: 451 E---ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEA 506
E + L+ +++D +YTPR T LLK + G I + G+EM + Q L+TG K
Sbjct: 230 ESYLDRLKSNVVIYDLIYTPRPTVLLKKSAERGFICIDGLEMLVEQGAASLKLWTGLKSV 289
Query: 507 PKEFMREIVLAKF 519
P MR L K
Sbjct: 290 PTNIMRNSALNKL 302
>gi|57867066|ref|YP_188739.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251811012|ref|ZP_04825485.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|282875976|ref|ZP_06284843.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|417913720|ref|ZP_12557383.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|418606026|ref|ZP_13169322.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|418609480|ref|ZP_13172632.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|418612796|ref|ZP_13175820.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|418625281|ref|ZP_13187934.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|418626391|ref|ZP_13189003.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|418629399|ref|ZP_13191907.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|419769474|ref|ZP_14295568.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771800|ref|ZP_14297846.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|420165585|ref|ZP_14672276.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|420170302|ref|ZP_14676863.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|420172648|ref|ZP_14679147.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|420197474|ref|ZP_14703198.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|420202365|ref|ZP_14707958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|420209101|ref|ZP_14714539.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|420211257|ref|ZP_14716631.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|420227385|ref|ZP_14732154.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|421606910|ref|ZP_16048161.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
gi|71152254|sp|Q5HNV1.1|AROE_STAEQ RecName: Full=Shikimate dehydrogenase
gi|57637724|gb|AAW54512.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis RP62A]
gi|251805522|gb|EES58179.1| shikimate dehydrogenease [Staphylococcus epidermidis BCM-HMP0060]
gi|281295001|gb|EFA87528.1| shikimate dehydrogenase [Staphylococcus epidermidis SK135]
gi|341654742|gb|EGS78480.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU109]
gi|374407694|gb|EHQ78546.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU065]
gi|374409465|gb|EHQ80256.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU057]
gi|374817873|gb|EHR82048.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU117]
gi|374825423|gb|EHR89359.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU125]
gi|374832825|gb|EHR96530.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU126]
gi|374834102|gb|EHR97762.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU127]
gi|383358093|gb|EID35554.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360619|gb|EID38014.1| shikimate dehydrogenase [Staphylococcus aureus subsp. aureus IS-K]
gi|394235386|gb|EJD80958.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM088]
gi|394240640|gb|EJD86063.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM070]
gi|394241809|gb|EJD87218.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM067]
gi|394266281|gb|EJE10927.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM020]
gi|394269773|gb|EJE14303.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM018]
gi|394279329|gb|EJE23637.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM003]
gi|394281710|gb|EJE25936.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM001]
gi|394297191|gb|EJE40800.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05003]
gi|406657379|gb|EKC83767.1| shikimate 5-dehydrogenase [Staphylococcus epidermidis AU12-03]
Length = 269
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 411
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 412 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|417659556|ref|ZP_12309156.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|417908509|ref|ZP_12552266.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|418605463|ref|ZP_13168787.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|420183257|ref|ZP_14689390.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|420194893|ref|ZP_14700690.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|420214055|ref|ZP_14719335.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|420216205|ref|ZP_14721421.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|420220541|ref|ZP_14725500.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|420221619|ref|ZP_14726546.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|420225792|ref|ZP_14730619.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|420229699|ref|ZP_14734404.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|420232110|ref|ZP_14736752.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|420234757|ref|ZP_14739317.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
gi|329735193|gb|EGG71485.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU045]
gi|341655870|gb|EGS79593.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU037]
gi|374402352|gb|EHQ73382.1| shikimate dehydrogenase [Staphylococcus epidermidis VCU041]
gi|394249720|gb|EJD94933.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM049]
gi|394263953|gb|EJE08674.1| shikimate dehydrogenase [Staphylococcus epidermidis NIHLM021]
gi|394283977|gb|EJE28138.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05005]
gi|394285894|gb|EJE29960.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04008]
gi|394290245|gb|EJE34109.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH08001]
gi|394292295|gb|EJE36054.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH05001]
gi|394293226|gb|EJE36949.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH06004]
gi|394298993|gb|EJE42548.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH04003]
gi|394301832|gb|EJE45286.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051668]
gi|394304000|gb|EJE47410.1| shikimate dehydrogenase [Staphylococcus epidermidis NIH051475]
Length = 269
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 36/289 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMF-VDDLKKFFSTYSSPDFAGFSV 295
F +I P+ HS P++H+ F+ +N Y I VP+ D+KK S S GF+V
Sbjct: 3 FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKS---IDGFNV 59
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE ++ + D+++ A+++ AVNT++ + DGK IGYNTD GY
Sbjct: 60 TIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDG-------------IGY 104
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDV--- 411
NG + ++ GAGGA + +A K + + + R + + ++
Sbjct: 105 VNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
Query: 412 -MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
+ A D + I+ N TP GM+ NTD V +S L + LV D VY P KT
Sbjct: 165 NLSHAESHLDEFD-------IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKT 216
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L +AE G I +G++MF+ Q F ++T E + M+ IV+ K
Sbjct: 217 PILIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL 265
>gi|392586617|gb|EIW75953.1| Pentafunctional AroM protein [Coniophora puteana RWD-64-598 SS2]
Length = 1637
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 221/526 (42%), Gaps = 62/526 (11%)
Query: 35 EGADVVEIRLDCINN-------FQPG----------KDLEIILTKKPLPVLIVYRPKWAG 77
EG D +E+R+D + PG + L + LP++ R G
Sbjct: 1129 EGVDALELRVDLLRAPKDLDKPVAPGTYIPPAAYVAEQLAALRRATSLPIVFTVRTVSQG 1188
Query: 78 GLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
G + +G E + E L LA G +YVD E+ + + + G IV+ D
Sbjct: 1189 GAFPDGAEKEAFELLELAVKNGVEYVDVEITFDQQRIKELATRAHRGHSQIVASFHDWSG 1248
Query: 137 PSEEDLGYLVSRMQATG--ADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVG 189
+ + + + +DI+K+V N++ + +F+ +S + PIIA ++G
Sbjct: 1249 SMKWSEALVKDKYKVASELSDIVKIVGKANELKDNFALFEFVSRVEAQPGAKPIIAINMG 1308
Query: 190 ERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKP 247
G +S++L N L + P P S Q + H+ + F L P
Sbjct: 1309 AEGQLSRVL----NRTLTPVTHPLLPSKAAPGQLSFAQIQQALHLAGQLPARRFFLFGTP 1364
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKEAVMKF 306
+ S P LHN F + Y + D+ ++ +T +SPDF G SV P+K VM
Sbjct: 1365 ISQSPSPTLHNTGFATLGLPHQYDLLETSDVGEQIRATLASPDFGGASVTIPHKLDVMPL 1424
Query: 307 CDEVHPLAQAIAAVNTIIRRPSDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTAS 361
D + P A+AI AVNTII S+G L+G NTD + I E+
Sbjct: 1425 LDRLTPAAEAIGAVNTIIPT-SEGASGARILVGDNTDW----LGMRACILEKQP------ 1473
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPFED 420
S A ++ GAGG RA + +S GA R+ + + +A++L A +
Sbjct: 1474 --SLAAPAAALVIGAGGTARAAIYALQSLGAKRIYVHNRTAAKAQALVDAFPNARVEVVE 1531
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ----LVFDAVYTPRKTRLLKDA 476
L P A + + P + ETL D +V D Y P +T LL A
Sbjct: 1532 RLGAWPGD----APSVIISTVPASAGAAGLPETLFDKAVARGIVVDMAYKPAETPLLALA 1587
Query: 477 EAAGA---IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+ + VSGVE+ L Q QF +TG++APK ++ VL +
Sbjct: 1588 RSVASQSWATVSGVEVLLAQGYEQFERWTGRKAPKGVVQRAVLEMY 1633
>gi|423106412|ref|ZP_17094113.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5242]
gi|376377849|gb|EHS90616.1| shikimate dehydrogenase [Klebsiella oxytoca 10-5242]
Length = 287
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 143/300 (47%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F H+ + +Y+ V ++LK + +
Sbjct: 3 ERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNEELKDVVQGFRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K + ++ D++ P A+ + AVNT++ +G L G+ TD T A
Sbjct: 63 LRGCNVSMPNKTEICQYLDKLSPAAELVGAVNTVVN--DNGVLTGHITDG----TGYMRA 116
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAK 405
+KE G + G+ + GAGGA AL A + + IF D F A+
Sbjct: 117 LKEEGID---------IIGKKMTVLGAGGAATALCVQAALDDVKAISIFNRKDKFFANAE 167
Query: 406 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ + D L + + IL NAT +GM P ++ + +++ LR
Sbjct: 168 QTVAKIRNNTNCEIHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPDDSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PRKT LL+ AE G ++G+ M L Q F ++TGKE P E ++ I+
Sbjct: 228 DLIVSDVVYNPRKTYLLEVAEKKGCRTINGLGMMLWQGARAFEIWTGKEMPVEHVKNILF 287
>gi|168204596|ref|ZP_02630601.1| shikimate 5-dehydrogenase [Clostridium perfringens E str. JGS1987]
gi|170663804|gb|EDT16487.1| shikimate 5-dehydrogenase [Clostridium perfringens E str. JGS1987]
Length = 271
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PN + V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K EI
Sbjct: 225 AKNNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEEI 263
>gi|386726061|ref|YP_006192387.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
gi|384093186|gb|AFH64622.1| shikimate 5-dehydrogenase [Paenibacillus mucilaginosus K02]
Length = 302
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
+++ T ++G+ PV HSK P++ N F N Y + LK + + F
Sbjct: 12 LDSHTILYGVFGDPVRHSKSPVMLNRAFDVAGINAAYGAFHILPGTLKDAVAGIRALGFR 71
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VM + DE+ A+ I AVNT++ G+LIGYNTD I ++++
Sbjct: 72 GVNVTVPHKLEVMSYLDEIDEGARVIGAVNTVVN--EGGRLIGYNTDGIGYIRSLKE--- 126
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G L GR ++ GAGGA R + + GA + I + E+A LA
Sbjct: 127 ---------ETGIELKGRKVLMIGAGGAARGVGYALAQEGAEHIYIANRTKEKALDLADA 177
Query: 411 VMG----AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ G + ++I + A++ N T +GM+PN D VP+ +R+ +V D +Y
Sbjct: 178 LGGYGSISGHGLDEIHELVGD-AALIVNNTLVGMYPNVDEVPMDISLIREDHVVSDLIYN 236
Query: 467 PRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL++A E GA + SG+ MF+ Q F +TG+ AP E MR+ VL F
Sbjct: 237 PLETRLLREAREKQGATVHSGLGMFIYQGAYAFEYWTGQPAPVEAMRKAVLDSF 290
>gi|295109164|emb|CBL23117.1| shikimate dehydrogenase [Ruminococcus obeum A2-162]
Length = 288
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 139/297 (46%), Gaps = 30/297 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+HI T + L+ PV HS P +HN + + Y+ V D + + +
Sbjct: 3 KHITGHTGLLCLLGSPVAHSVSPEMHNEACDQLGLDYTYLAFDVPEDKMPEAVQGLRTMG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G+++ P K + K D+V P ++ A NTI+ +G L Y TD
Sbjct: 63 ARGWNITMPGKNIMCKLADKVSPASEISGACNTIVN--DNGVLTAYTTD----------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAK 405
G+ A G + G+ L GAGGA A+ A G A + +F++ F RA+
Sbjct: 110 --GVGFMRAVAENGVDIIGKKMTLLGAGGAATAILVQAALDGVAEINVFNVRDNFFSRAE 167
Query: 406 SLA------SDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
+ ++ ++D IL + AIL N T +GM PN DR +++ ++
Sbjct: 168 EIVARLNERTECKVTLHDYDDPEILRASIAESAILVNGTSVGMAPNVDRTIITDTSMFHK 227
Query: 458 QL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
L VFD +Y P++TRLL++A+ AG +G+ M L Q F L+TG+E P E ++E
Sbjct: 228 DLFVFDVIYNPQETRLLREAKEAGCRTGNGMYMLLYQGAASFKLWTGEEMPVEIIKE 284
>gi|328857285|gb|EGG06402.1| hypothetical protein MELLADRAFT_74837 [Melampsora larici-populina
98AG31]
Length = 1581
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 228/521 (43%), Gaps = 59/521 (11%)
Query: 26 LSNMYQAKAEGADVVEIRLDCINNFQPGK--------DLEIILTK-------KPLPVLIV 70
LSN Q G D VE+R+D +++ GK L I + LP++
Sbjct: 1083 LSNFNQLTT-GCDAVELRVDLLSS--AGKTPQASTVPSLHFIRRQVAALRRLTTLPIIFT 1139
Query: 71 YRPKWAGGLY--EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIV 128
R GG + +G E + E L L G +YVD EL + ++ +Q + + G ++
Sbjct: 1140 VRTDGQGGKFPGQGSEKEYFELLELGLRTGCEYVDVELGHSPELI-RQLGAKK-GHSLLI 1197
Query: 129 SCNLDCETPSEEDLGYLVSRMQATG--ADIIKLVFSVNDITE-IARIFQLLSHCQV---P 182
D + + S+ QA ADI+KLV + + +A + +H P
Sbjct: 1198 GSYHDFAGKLSWNSKEMESKYQAIRKYADIVKLVTVAKSMDDNLALLNFRATHSSTSFPP 1257
Query: 183 IIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV--EHINADTKV 240
+I ++G G +S++LSP + L + L G T ++Q + +H ++
Sbjct: 1258 LITINMGLEGQMSRILSPVLS-PLTHELLPEPAAPGQLTYNQIQQALDLLGQH---PSRQ 1313
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNG-IYVPMFVDDLKK--FFSTYSSPDFAGFSVGF 297
F L P+GHS+ P++HN +F ++ +Y PM D L K + +PDF G SV
Sbjct: 1314 FWLFGNPIGHSRSPLMHNTSFEALSLRSHVYSPMETDTLDKESVKAVLRAPDFGGASVTI 1373
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P K V+ DE+ A+ + AVNTIIRR KLIG NTD A T I ++
Sbjct: 1374 PLKLEVLSLMDELTDEAREVGAVNTIIRR--GDKLIGDNTDWYAIATLIRRSLPADPTVR 1431
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSL--ASDVMGA 414
TA ++ GAGG RA + G R+ + + RA+ L A +
Sbjct: 1432 ATA-----------LVVGAGGTSRAAVYALHRLGVNRIGLVNRTRSRAEELVAAMPTSWS 1480
Query: 415 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
EDI + I+ + P +T +VP + ++ + Y +
Sbjct: 1481 IEVLEDIEEAMKLEPGIVISTVP----SDTTKVPKELLKRKGGGVLVELAYEINSG--YE 1534
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+ G V+G+E+ + Q QF ++TGK+ P + + +++
Sbjct: 1535 NVLGDGWKFVNGLEILIEQGSKQFEIWTGKKMPIDKVWKVI 1575
>gi|302309374|ref|NP_986731.2| AGR066Wp [Ashbya gossypii ATCC 10895]
gi|327507749|sp|Q74ZZ1.2|ARO1_ASHGO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|299788329|gb|AAS54555.2| AGR066Wp [Ashbya gossypii ATCC 10895]
Length = 1577
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 234/560 (41%), Gaps = 118/560 (21%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAE--GADVVEIRLDCINNFQPG---KDLEII-LT 61
K +T +C + + +L M + K G + VE+R+D + N+ K L + L
Sbjct: 1065 KRSTFVCL-----TFQNLLPEMERIKEAVYGCEAVEVRVDHLENYSQDFVLKQLTALRLA 1119
Query: 62 KKPLPVLIVYRPKWAGGLYEGDEHKRLE-ALHLAEDLGADYVDFELKVAS----NILGKQ 116
LP++ R K GG + +++ LE L + G +++D EL + S IL K+
Sbjct: 1120 TDSLPIVFTIRTKKQGGKFLDNDYSTLEDLLTVGLKAGVEFLDLELTLPSPIHQRILNKR 1179
Query: 117 YSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL 176
Y + G+ S E P E + ++ A D IK V + + + +
Sbjct: 1180 YKTRIIGSHHDFSGEFSWEHPEWE---HRYAQALAMQVDAIKFVATAKGFGDNLSLEEFR 1236
Query: 177 S-HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
S H P+IA ++ E G +S++L N L + P P +LRQ + +
Sbjct: 1237 SKHTDKPLIAINMRECGKLSRVL----NTILTPITSDVLPQAAAPGQLTLRQ---INELY 1289
Query: 236 AD------TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--------LKKF 281
A K+F ++ P+GHS+ PILHN YN + +P D +KK
Sbjct: 1290 ASIGGLRPKKMF-VVGSPIGHSRSPILHN-----TGYNSLGLPYTFDKFETDSAEIVKK- 1342
Query: 282 FSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEA 341
S S D G +V P K+ +M++ DE+ A+ I AVNTII + DG+ IG+NTD
Sbjct: 1343 -SLLSREDLGGIAVTIPLKQDIMQYLDELTDSAKCIGAVNTIIPK-KDGRFIGHNTDW-- 1398
Query: 342 SITAIEDAIKERGYKNGTASFGSP----LAGRMFVLAGAGGAGRALAFGAKSRGARVVI- 396
G KN + G P AG ++ G+GG RA A+ +
Sbjct: 1399 -----------LGIKNSLIANGVPEHVNTAG---LIVGSGGTARAAAYAFHEMQCSTIYM 1444
Query: 397 ------------------FDI----DFERAKSLASDV------MGAARPFEDILNFQPEK 428
F+I E+ + L+ V + + +P +D L+ +
Sbjct: 1445 INRTTSNLTELQKSFPQEFNIHVIESLEQIEQLSEPVGIAVSCVPSDKPLDDALS--QKL 1502
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA-EAAGAIIVSGV 487
A L+ + P + DA Y P T +LK A E G VSG
Sbjct: 1503 SAFLSRPSATNFIPT----------------ILDAAYKPLVTPVLKLASEVHGWRPVSGA 1546
Query: 488 EMFLRQAIGQFNLFTGKEAP 507
+M + Q + QF ++TG +AP
Sbjct: 1547 QMLVHQGVAQFEIWTGFKAP 1566
>gi|315645929|ref|ZP_07899050.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
gi|315278690|gb|EFU42004.1| shikimate 5-dehydrogenase [Paenibacillus vortex V453]
Length = 286
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 133/292 (45%), Gaps = 20/292 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I D + G++ P+GHSK P +HN + +G YVP+ V + L + + F
Sbjct: 7 IERDYLLLGVMGDPIGHSKSPAMHNAAITALGLSGAYVPLHVRPEGLGEAIQAVKALGFR 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VMK+ D V A+ I AVNTI+ +G L GYNTD + +++D
Sbjct: 67 GVNVTIPHKVEVMKYLDVVDEGARQIGAVNTIVN--DNGTLKGYNTDGIGYVRSLKD--- 121
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF---GAKSRGARVVIFDIDFERAKSLA 408
L G+ V+ GAGGA R + + G K +V A +
Sbjct: 122 ---------EACPDLKGKRIVVLGAGGAARGIIYALIGEKPETISIVNRTAAKALALAEE 172
Query: 409 SDVMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
+ R + ED ++ N T +GM P +P+ + + + +V D +Y P
Sbjct: 173 WSSLADLRGYGEDYAEEALLTADVIINTTSVGMFPRISEIPIPQGHIPEGIVVSDLIYNP 232
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
KT LL+ E + G+ MF+ Q +TG AP + M+E VL+ F
Sbjct: 233 LKTELLRQGELRQCTVHGGLGMFINQGAYALEYWTGLTAPVQAMKEAVLSSF 284
>gi|384452778|ref|YP_005665375.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
gi|334695467|gb|AEG88683.1| shikimate 5-dehydrogenase [Chlamydophila psittaci 08DC60]
Length = 477
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 218/499 (43%), Gaps = 55/499 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTP--VLGLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P V G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVVQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
L + + G+GGA +A+A GA++ IF+ A+ L+ G A P L
Sbjct: 327 NILLQNKHVGIVGSGGAAKAIATTFADSGAQISIFNRTKTHAEKLSVLCHGQAFP----L 382
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
N E I + L + P+ + + ++ D P+++ K A+ G
Sbjct: 383 NALSENHNI--DILILCLPPDVEIPEIYPP------VIIDINTLPKESLYTKKAKERGCQ 434
Query: 483 IVSGVEMFLRQAIGQFNLF 501
I+ G EMF QA+ QF+L+
Sbjct: 435 ILYGYEMFAEQALLQFSLW 453
>gi|374109982|gb|AEY98887.1| FAGR066Wp [Ashbya gossypii FDAG1]
Length = 1577
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 234/560 (41%), Gaps = 118/560 (21%)
Query: 8 KNTTMICAPLMAQSVEQVLSNMYQAKAE--GADVVEIRLDCINNFQPG---KDLEII-LT 61
K +T +C + + +L M + K G + VE+R+D + N+ K L + L
Sbjct: 1065 KRSTFVCL-----TFQNLLPEMERIKEAVYGCEAVEVRVDHLENYSQDFVLKQLTALRLA 1119
Query: 62 KKPLPVLIVYRPKWAGGLYEGDEHKRLE-ALHLAEDLGADYVDFELKVAS----NILGKQ 116
LP++ R K GG + +++ LE L + G +++D EL + S IL K+
Sbjct: 1120 TDSLPIVFTIRTKKQGGKFLDNDYSTLEDLLTVGLKAGVEFLDLELTLPSPIHQRILNKR 1179
Query: 117 YSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL 176
Y + G+ S E P E + ++ A D IK V + + + +
Sbjct: 1180 YKTRIIGSHHDFSGEFSWEHPEWE---HRYAQALAMQVDAIKFVATAKGFGDNLSLEEFR 1236
Query: 177 S-HCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235
S H P+IA ++ E G +S++L N L + P P +LRQ + +
Sbjct: 1237 SKHTDKPLIAINMRECGKLSRVL----NTILTPITSDVLPQAAAPGQLTLRQ---INELY 1289
Query: 236 AD------TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--------LKKF 281
A K+F ++ P+GHS+ PILHN YN + +P D +KK
Sbjct: 1290 ASIGGLRPKKMF-VVGSPIGHSRSPILHN-----TGYNSLGLPYTFDKFETDSAEIVKK- 1342
Query: 282 FSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEA 341
S S D G +V P K+ +M++ DE+ A+ I AVNTII + DG+ IG+NTD
Sbjct: 1343 -SLLSREDLGGIAVTIPLKQDIMQYLDELTDSAKCIGAVNTIIPK-KDGRFIGHNTDW-- 1398
Query: 342 SITAIEDAIKERGYKNGTASFGSP----LAGRMFVLAGAGGAGRALAFGAKSRGARVVI- 396
G KN + G P AG ++ G+GG RA A+ +
Sbjct: 1399 -----------LGIKNSLIANGVPEHVNTAG---LIVGSGGTARAAAYAFHEMQCSTIYM 1444
Query: 397 ------------------FDI----DFERAKSLASDV------MGAARPFEDILNFQPEK 428
F+I E+ + L+ V + + +P +D L+ +
Sbjct: 1445 INRTTSNLTELQKSFPQEFNIHVIESLEQIEQLSEPVGIAVSCVPSDKPLDDALS--QKL 1502
Query: 429 GAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA-EAAGAIIVSGV 487
A L+ + P + DA Y P T +LK A E G VSG
Sbjct: 1503 SAFLSRPSATNFIPT----------------ILDAAYKPLVTPVLKLASEVHGWRPVSGA 1546
Query: 488 EMFLRQAIGQFNLFTGKEAP 507
+M + Q + QF ++TG +AP
Sbjct: 1547 QMLVHQGVAQFEIWTGFKAP 1566
>gi|421277007|ref|ZP_15727827.1| shikimate dehydrogenase [Streptococcus mitis SPAR10]
gi|395876288|gb|EJG87364.1| shikimate dehydrogenase [Streptococcus mitis SPAR10]
Length = 284
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 49/308 (15%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEACLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+G+ SF ++ + VL GAGGA +A+ A G +++ +F + S
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAILAQAILDGVSQISVF---------VRSS 156
Query: 411 VMGAARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSE 451
M RP+ ED+ Q + +L NAT +GM + +P S
Sbjct: 157 SMEKTRPYLEKIQNTTGFRVDLLALEDVQELQDSITQADLLVNATSVGMDGFSQPIPTSI 216
Query: 452 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
L + LV D +Y P +T LK A G V+G+ M L QA F L+TGKE P + +
Sbjct: 217 -VLPEKLLVADVIYQPFETPFLKWARNQGNHAVNGLGMLLYQAAEAFELWTGKEMPTDQI 275
Query: 512 REIVLAKF 519
E++ K+
Sbjct: 276 WELLKQKY 283
>gi|110801505|ref|YP_698019.1| shikimate 5-dehydrogenase [Clostridium perfringens SM101]
gi|123341937|sp|Q0SV31.1|AROE_CLOPS RecName: Full=Shikimate dehydrogenase
gi|110682006|gb|ABG85376.1| shikimate dehydrogenase [Clostridium perfringens SM101]
Length = 271
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 130/273 (47%), Gaps = 20/273 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVRGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMNQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+ D
Sbjct: 113 ------KVDIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDKEKVFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEIHEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVALDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 508
A+ G V G+ M + Q + ++ G + K
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDK 257
>gi|296127375|ref|YP_003634627.1| shikimate 5-dehydrogenase [Brachyspira murdochii DSM 12563]
gi|296019191|gb|ADG72428.1| shikimate 5-dehydrogenase [Brachyspira murdochii DSM 12563]
Length = 283
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 35/299 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
IN+ T + GL + P HS PI+HN F +N N Y+ VD +LK ++ + +
Sbjct: 3 INSSTILTGLFASPCRHSISPIMHNEAFNKLNLNYAYLAFEVDKNNLKDAVNSIKTLNMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA-- 349
G ++ P K+ V+K+ DE+ A+ +VNTI+ +G L GY+TD E I ++E+
Sbjct: 63 GVNLSMPNKKEVIKYLDEISEAAELTQSVNTIVN--DNGILKGYSTDGEGFIKSLEEENI 120
Query: 350 -IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK 405
IK++ + G GGA A+ A G + + +F D ++ K
Sbjct: 121 FIKDKN----------------ITILGTGGASIAIISQAALYGVKGIYVFKRDTNWGEQK 164
Query: 406 SLASDVMGAAR--------PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
+ ++ ++IL + + +IL NAT +GM + + + RD
Sbjct: 165 KIIDNIAEKTNCSIELFSLENKNILKRKIDDSSILINATSVGMKEDVSLIE-DKTFFRDD 223
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D +Y+P KT+LL+ +E G I++G+ M L Q F L+T ++ P E+++ I+
Sbjct: 224 LVVSDCIYSPAKTKLLQISEKEGCKIINGMGMLLYQGALSFELWTNEKMPVEYIKNIIF 282
>gi|124026892|ref|YP_001016007.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. NATL1A]
gi|123961960|gb|ABM76743.1| Shikimate / quinate 5-dehydrogenase [Prochlorococcus marinus str.
NATL1A]
Length = 311
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 36/303 (11%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSS 287
K+ I T + GL+ +PV HS PI+HN + + + YV P DL+K
Sbjct: 16 KMSTITGKTNLVGLLGQPVNHSLSPIMHNAAYEEMGLDWCYVAMPCHSQDLEKVTKALRF 75
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
DF G ++ P+K+ V+K C+++ +A I AVNT+I + + IG NTD + +T ++
Sbjct: 76 LDFKGLNITIPHKQEVLKACNKLTEIANDIQAVNTLIPE-KNNQWIGANTDVQGFLTPLK 134
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 407
D L + V+ G GG+ RA+ G S + V E+ ++
Sbjct: 135 D---------------HNLKNKSVVVIGCGGSARAVVMGLSSLNIKKVTIISRNEKTLNI 179
Query: 408 ASDVMGAARPFEDI---------LNFQP--EKGAILANATPLGMH---PNTDRVPVSEET 453
DI LN P ++ ++ N TP+GM+ + VP+ E
Sbjct: 180 FVQSTSNLLSKRDISIESINNTKLNVLPYIQEADLIINTTPIGMNGSQAKQESVPLGHEV 239
Query: 454 ---LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEAPKE 509
L + +++D +YTPR T LK + + G++M + Q L+TG + P +
Sbjct: 240 WDCLSNKTILYDLIYTPRPTNWLKIGQQKNCFTIDGLDMLVEQGAFSIKLWTGFHDVPVQ 299
Query: 510 FMR 512
M+
Sbjct: 300 TMK 302
>gi|288818612|ref|YP_003432960.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384129366|ref|YP_005511979.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|288788012|dbj|BAI69759.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308752203|gb|ADO45686.1| shikimate 5-dehydrogenase [Hydrogenobacter thermophilus TK-6]
Length = 270
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+++ T+V+G++ PV HS P+ N F +++ + +YVP V D K+ F +
Sbjct: 2 NLSGKTEVYGIVGFPVKHSLSPVFQNAFFEYLSLDAVYVPFEVKPDSFKEAFLGLKALGV 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ P+KE + CD ++ I AVNT+ + +D ++ GYNTD + A+ +
Sbjct: 62 KGVNITVPFKERAFELCDLSDEPSKVIRAVNTV--KFTD-RIEGYNTDWIGFLRALRELE 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 410
KE L G+ ++ GAGG +A+ + G + IF+ +ERA LA +
Sbjct: 119 KE-------------LEGKKVLVLGAGGTAKAVVYALSREGCYIYIFNRTYERAIELARN 165
Query: 411 VMG-AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRDYQLVFDAVYTPR 468
+ ED+L+ I+ N T +G+ + D P+ + + LRD+ +VFD +Y R
Sbjct: 166 FSAQVVKKPEDVLD----DADIIINTTSVGL--SDDDPPLFDYQMLRDHHIVFDVIY--R 217
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
T L+K A GA +G+ M + Q + F ++TG EAP
Sbjct: 218 STPLVKTALKKGAKAQNGLSMLIYQGMESFRIWTGLEAP 256
>gi|421076099|ref|ZP_15537101.1| Shikimate dehydrogenase [Pelosinus fermentans JBW45]
gi|392525958|gb|EIW49082.1| Shikimate dehydrogenase [Pelosinus fermentans JBW45]
Length = 281
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 156/290 (53%), Gaps = 26/290 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I + T+ G++ P+GHS PI+HN F+ ++ + +Y+P+ V ++L + + + +F
Sbjct: 2 ITSKTQKIGILGWPLGHSLSPIMHNAAFKSLHLDYVYIPLPVHPENLAQAVAGLKAMEFT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K +M + DE+ AQ + AVNT++ + DGK IGYNTD +
Sbjct: 62 GVNVTIPHKVEIMSYLDEIDFSAQLVGAVNTVVIK--DGKSIGYNTDAQ----------- 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERA----KS 406
G+ S G + + V+ GAGGA RA+A G G + +I + E+A K
Sbjct: 109 --GFVQSILSNGIKITEQTAVILGAGGAARAVACGLFQHGIKKIIIGARNLEKAQQFVKL 166
Query: 407 LASDVMGAARPFEDILNFQP--EKGAILANATPLGMH-PNTDRVPVSEETLRDYQLVFDA 463
+++V A +ED F+ ++ IL N+TP+GM +T+ + + E L V D
Sbjct: 167 FSTNVDIQAYDWED-FGFKNLLQECDILINSTPIGMSVHDTEVLRIPWEILNPEAAVCDL 225
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+Y P KT+LL A+ G I ++G+ M + Q F L+TG++ P++ M +
Sbjct: 226 IYNPSKTQLLLSAKKHGHIAINGLGMLIEQGALAFELWTGEQGPRQIMSD 275
>gi|210622509|ref|ZP_03293214.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
gi|210154222|gb|EEA85228.1| hypothetical protein CLOHIR_01162 [Clostridium hiranonis DSM 13275]
Length = 294
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 139/285 (48%), Gaps = 28/285 (9%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSP---DFA 291
N++T++F L+ PV +S P +H+ F NG Y+ F + +K + T S +
Sbjct: 14 NSETRIFALLGHPVSNSFSPNMHSYLFEKYGVNGAYL-CFDIEPRKIYKTVESMRILNAV 72
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V PYK +M DE+ A+ I AVNT+ + DG L GYNTD + AI D
Sbjct: 73 GFNVTIPYKTDIMAGLDEIDRNAELIGAVNTV--KNEDGVLKGYNTDGRGFVKAIIDR-- 128
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLA-- 408
+ G+ ++ G+GGA R++A S G ++ I + E A+ +A
Sbjct: 129 -----------NISIIGKSALILGSGGACRSIAIEMASNGIGKIDIRNRSLENAEKIAKR 177
Query: 409 -SDVMGAARPF--EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV-FDAV 464
+ V G + E + EK L N TP+GM + P+ E D +V +D V
Sbjct: 178 VNSVFGTEVVYSKEVVTKNDLEKYDFLINTTPIGME--SKECPIDEGIEVDSDIVVYDIV 235
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
Y P +T L+K AE ++ G++M + Q I F ++TGK+ E
Sbjct: 236 YKPHRTNLIKWAEKNNLKVIHGIDMLINQGIDAFEIWTGKKVDSE 280
>gi|188587948|ref|YP_001920063.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
gi|188498229|gb|ACD51365.1| shikimate 5-dehydrogenase [Clostridium botulinum E3 str. Alaska
E43]
Length = 289
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HS P +HN F + + Y+ V + L+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSSSPTMHNEAFAKLGLDYAYLAFEVGTEQLEDTIKGFRAMS 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V K+ D++ P A+ AVNT++ DG L G+ TD + A++DA
Sbjct: 63 VRGCNVSMPNKTVVHKYLDKLSPAAELCGAVNTVVN--DDGVLTGHITDGIGYMRALKDA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAK 405
G G+ + GAGGA A+ A G A + IF D F RA+
Sbjct: 121 -------------GINPIGKKMTIVGAGGAATAIEIQAALDGVAEISIFNRKDEFFARAE 167
Query: 406 SLASDV---MGAARPFEDILNFQPEKGAIL-----ANATPLGMHPNTDRVPVSEET-LRD 456
D+ D+ + K I+ NAT +GM P + + + + LR
Sbjct: 168 KTVKDINEKTNCKATLYDLSDLDKLKEEIVDSYLFTNATGMGMKPLEGKTYIPDSSFLRS 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+V D VY PR+T LL+ A G V+G+ M L Q F ++TGKE P E+M++I+
Sbjct: 228 DLIVSDVVYAPRETELLRMAREVGCKTVNGLGMMLFQGAVAFEMWTGKEMPIEYMKDIL 286
>gi|353240388|emb|CCA72260.1| probable ARO1-Pentafunctional AROM polypeptide [Piriformospora indica
DSM 11827]
Length = 1615
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 230/525 (43%), Gaps = 75/525 (14%)
Query: 36 GADVVEIRLDCINNF----QPG--------KDLEIILTKKPLPVLIVYRPKWAGGLYEGD 83
G D VE+R+D ++ QP + L + LPV+ R GG +
Sbjct: 1114 GIDAVELRVDLLSPHGAAKQPNVPPREYVIQQLAWLKHITNLPVVYTVRTIAQGGAFPDK 1173
Query: 84 EHKRLEAL-HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H+ L AL L +G +Y+D E + + + ++ ++ + ++ I S + DL
Sbjct: 1174 AHEELFALLELGIQMGTEYIDVETTLPHSKI-RKLAARKGASKLIASYH-----DWSGDL 1227
Query: 143 GYLVSRMQA------TGADIIKLVFSVNDITEIARIFQLLSHCQV-----PIIAYSVGER 191
+ + ++A + DI+K+V N + E + + PIIA ++GE+
Sbjct: 1228 RWFGTEIEAIHTTASSLGDIVKIVGKANSLEENMELRSFTKSVKKANQSKPIIAINLGEQ 1287
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVG 249
G +S++L+ F + + L PV P S Q H+ K F L P+
Sbjct: 1288 GQLSRILNETFT-PVTHSQL---PVAAAPGQLSFSQIQSGLHLLGQLPAKRFYLFGNPIS 1343
Query: 250 HSKGPILHNPTFRHV----NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305
S P LHN F HV ++ ++ VD+ + S SP F G SV P+K +M+
Sbjct: 1344 KSPSPTLHNSGF-HVLGLPHHYELHQTETVDESVR--SIIRSPTFGGASVTIPHKLTIME 1400
Query: 306 FCDEVHPLAQAIAAVNTIIR-RPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASF 362
DE+ P A+ I AVNT+I +DGK L+G NTD + I +++ R TA
Sbjct: 1401 ALDELSPAAKLIGAVNTVIPVEQADGKTILLGDNTDWQ----GIRNSVLSRSACRWTAQ- 1455
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDV-----MGAAR 416
++ GAGG RA + G R+++++ + A LAS + A
Sbjct: 1456 ------DTGLIIGAGGTARAAVYALNQLGVGRILLWNRTYSSATQLASSFPVEYNITALT 1509
Query: 417 PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETL--RDYQLVFDAVYTPRKTRL 472
DI N P G + A+A G V ++ E R +V + Y P+ T L
Sbjct: 1510 DLSDISNVPPSIIIGTVPASAVTEG------GVKLAPEMFGCRQGGVVVEMAYRPKVTPL 1563
Query: 473 LKDAEAAGA--IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
L+ A A + V GV++ L Q + QF L+T AP+ + + V
Sbjct: 1564 LELASKASSKWTQVYGVDVLLEQGLRQFELWTTLRAPRRAITQSV 1608
>gi|327507647|sp|C6HCG7.1|ARO1_AJECH RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|240278751|gb|EER42257.1| pentafunctional AROM polypeptide [Ajellomyces capsulatus H143]
Length = 1595
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 222/529 (41%), Gaps = 66/529 (12%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRASVPLVFTIRTKGQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAVRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGQLSWVNGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV I + + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKAKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN FR + Y + D+ + SPDF G SV P K ++M DE+ P A +
Sbjct: 1310 HNTLFRQMGLPHTYGTLETDNPEVAKEFIRSPDFGGASVTIPLKLSIMPLLDEIAPEAMS 1369
Query: 317 IAAVNTIIRRPS--DGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
I AVNTI+ P DGK LIG+NTD + + + DA TAS G
Sbjct: 1370 IGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAG------ 1423
Query: 370 MFVLAGAGGAGRALAFGAKSRG---------------ARVVIFDID-----FERAKSLAS 409
++ G GG RA F ++ G + F D E K+L S
Sbjct: 1424 --LVIGGGGTARAAIFALQNMGYSPIYVLGRSPDKLSSMTSTFHTDHDIRILEDLKALES 1481
Query: 410 DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVFDAVYTP 467
A +P IL L N+D +E+ + +++ + Y P
Sbjct: 1482 LPTVAIGTIPGDKPIEPHMREILCRLFDLCEKANSD----TEQARGVSTKRILLEMAYKP 1537
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
T L++ A +G ++ G+E + Q + Q +T E+ R V+
Sbjct: 1538 SVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTNITPVYEYARNAVM 1586
>gi|116071826|ref|ZP_01469094.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. BL107]
gi|116065449|gb|EAU71207.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. BL107]
Length = 289
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 32/302 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
IN DT + GL+ PV HS P +HN + + N Y+P+ +LK+
Sbjct: 2 INGDTGLVGLLGNPVRHSLSPAMHNAALQALQLNWSYLPLPCTSQNLKEVLEGLRGVGCH 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSD-GKLIGYNTDCEASITAIEDAI 350
G +V P+K+ V C E+ PLA+ + AVNT+I P D G G NTD E +T + +
Sbjct: 62 GLNVTIPHKQDVAGLCQELSPLAKRLGAVNTLI--PLDSGGWHGTNTDVEGFLTPLGEPS 119
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS 409
+ + V+ G GG+ RA+A + G A + + +
Sbjct: 120 SWQNCRG--------------VIIGCGGSARAIAAALQGLGLASITVIGRRRDALDEFIQ 165
Query: 410 DVMGAARPFEDILNFQP------EKGAILANATPLGM--HPNTDRVPVSE---ETLRDYQ 458
D+ P L+ P E+ ++ N TP+GM H P+ E LR
Sbjct: 166 DLQHDDAPLTPCLHSNPMLASLIEQADLVVNTTPVGMAQHGEAQAFPLGEAIWSHLRGSA 225
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK-EAPKEFMREIVLA 517
+++D VYTPR T L ++ G + G+EM ++Q L++G+ + P E MR A
Sbjct: 226 VLYDLVYTPRPTAWLSWGQSRGHRCIDGLEMLVQQGAASLRLWSGRNDVPVETMRRAAEA 285
Query: 518 KF 519
Sbjct: 286 AL 287
>gi|436840750|ref|YP_007325128.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169656|emb|CCO23027.1| Shikimate dehydrogenase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 272
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 146/294 (49%), Gaps = 42/294 (14%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVG 296
K+FG+I P+GH+ P+LHN F N +Y+ P + ++ F T+ + +G SV
Sbjct: 8 KLFGIIGHPLGHTMSPLLHNWGFAQQNIRAVYMAWPTQPESIENFMHTFRTLPVSGASVT 67
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K +VM + D++ A+AI AVNT+ R + ++IG NTD
Sbjct: 68 IPHKISVMDYIDKLTDRAKAIGAVNTLYWR--NDQVIGDNTD------------------ 107
Query: 357 NGTASFGSPLAG-----RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLASD 410
TA PL + +L GAGGA RA G +S + I +I R +S A D
Sbjct: 108 --TAGVSEPLRPHCAQVKKALLIGAGGASRAAIVGLQS----LQIEEIHITNRTQSKAGD 161
Query: 411 VMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVY 465
+ A F D N + ++ N+T LGM +++ P+ + +V+D VY
Sbjct: 162 L---AEEFNVSTVDWDNRGDQHYDLIVNSTSLGMSGKLEKINPMILDNQDANTIVYDLVY 218
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +T LL++A A + G+EMFL Q + QF ++TG + + R+++L++
Sbjct: 219 NPLETVLLREAAARKCKTIHGIEMFLHQGLAQFKIWTGYDLDETAARKLLLSRL 272
>gi|417936145|ref|ZP_12579462.1| shikimate dehydrogenase [Streptococcus infantis X]
gi|343403054|gb|EGV15559.1| shikimate dehydrogenase [Streptococcus infantis X]
Length = 284
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ VD +L + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVDATELAETVANIRRYQMY 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEACLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLA 408
+G+ SF ++ + VL GAGGA +A+ A G V + E+ +
Sbjct: 109 -KGFFKSLPSF--KISRKRLVLLGAGGAAKAILAQAILDGVSQISVFVRSSSMEKTRPYL 165
Query: 409 SDVMGAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
+ A ED+ + Q + +L NAT +GM + +P S L + +V
Sbjct: 166 EKIQNATGFRVDLFALEDVQDLQDSITQADLLVNATSVGMDGTSQPIPTSI-VLPEKLMV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A G ++G+ M L QA F +TGKE P + + E++ K+
Sbjct: 225 ADVIYQPFETPFLKWARNQGNQSINGLGMLLYQAAEAFEFWTGKEMPTDQIWELLKQKY 283
>gi|429853054|gb|ELA28153.1| pentafunctional arom polypeptide [Colletotrichum gloeosporioides Nara
gc5]
Length = 1556
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 222/522 (42%), Gaps = 65/522 (12%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R D + ++ P + + ++ + +P++ R GG + + + LE
Sbjct: 1055 GSDAVELRADLLQDYSPEFVARQVALLRSVADVPIIFTLRTMAQGGKFPDEAFDQGLELY 1114
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
A +G +++D E+ + ++ + + +R I S + T S ++ + +A
Sbjct: 1115 QKASRMGVEFIDVEMTLPEKVI-QAVVERKGRSRIIASHHDPHGTLSWKNGSWTPFYNKA 1173
Query: 152 -TGADIIKLV---FSVNDITEIARI-FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGAL 206
D+IKLV S+ D ++AR ++L+ + PIIA ++G G +S++L NG L
Sbjct: 1174 LQWGDVIKLVGTAQSLEDNYDLARFKSEMLASHRTPIIALNMGSAGKLSRVL----NGCL 1229
Query: 207 VYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPVGHSKGPILHNPTFRHV 264
S P P S + K + D K F L KP+ S+ P LHN F V
Sbjct: 1230 TPVSHPDLPFKAAPGQLSAAEIRKALSLLGGIDPKSFYLFGKPISASRSPALHNSLFDLV 1289
Query: 265 NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII 324
Y D +PDF G SV P K +M DEV A+ I AVNTII
Sbjct: 1290 GLPHKYWRKETDVAADLRDIIRAPDFGGASVTIPLKLDIMNEIDEVSEAARVIGAVNTII 1349
Query: 325 RRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
G KL+G NTD + A++ GT + S ++ G+GG
Sbjct: 1350 PVSGSGQDGAKLVGDNTDWLGMVYALQ--------SEGTTARSSSGVQHAAMVIGSGGTT 1401
Query: 381 RALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI-LNFQPE-KGAILANATPL 438
RA F S G F +LA + G E + +F PE + L +A +
Sbjct: 1402 RAAIFALHSLG---------FGPIYALARNTNG----LETLKASFPPEFRIEALKSADQV 1448
Query: 439 GMHPNTDRVPVS--------EETLRDY--------------QLVFDAVYTPRKTRLLKDA 476
M ++ V VS + +LR+ +++ + Y PR T L++ A
Sbjct: 1449 PMLASSPTVVVSTIPADKPVDPSLRETLMAVLRHENVGDVTRVLLEMAYQPRHTPLMQLA 1508
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
E AG + G+E+ Q QF +T E RE VL +
Sbjct: 1509 EDAGWTTIPGLEVLAAQGWYQFQRWTDIVPQYETAREAVLGE 1550
>gi|325290050|ref|YP_004266231.1| shikimate dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
gi|324965451|gb|ADY56230.1| Shikimate dehydrogenase [Syntrophobotulus glycolicus DSM 8271]
Length = 273
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 141/284 (49%), Gaps = 34/284 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
+ +I PV HS P++H F +Y I VP +L + S + G+++
Sbjct: 3 YAVIGNPVKHSLSPVMHMAGFLASGIDASYEAITVPS--GELDAYVQMLSE-QYHGWNIT 59
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
+PYKE ++K+ D+V AQA+ AVNT+ + GKL GYNTD + A+++A
Sbjct: 60 YPYKEDMIKYLDDVSEEAQALGAVNTV--KNERGKLYGYNTDGAGFVAAVQNA------- 110
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G AG + GAGGA RA+ + A + I + + ++A LA +
Sbjct: 111 ------GFVPAGNRVAVIGAGGAARAVIYALAKEEAEITIVNRNQQKAGELARQI---EN 161
Query: 417 PFEDILNFQP-EKG------AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
F +N P +KG ++ TP+GM + P+ E +++ L D +Y P +
Sbjct: 162 KFGRPVNCVPFDKGEWMLSSGLIIQGTPIGMQ--DEPFPLVLEGIKEKVLAVDLIYKPLQ 219
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
T LK A+ G I++G+EM L Q ++++ G++AP E MR+
Sbjct: 220 TNFLKQAQNLGCRIMNGLEMLLYQGAYAWDIWFGRKAPVENMRK 263
>gi|237756605|ref|ZP_04585122.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691236|gb|EEP60327.1| shikimate 5-dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 279
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 29/290 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ +T V+GL PV HSK P F+H+ N +YVP V +D++K + D
Sbjct: 3 LDGNTLVYGLFGYPVKHSKSPTFQTAVFQHLGINAVYVPFQVKPEDIEKAVESLRVLDIK 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE V+ + +E+ + I AVNTI + DG LIGYNTD
Sbjct: 63 GVNVTIPHKENVIPYLNEISEEVKVIKAVNTI--KNIDGYLIGYNTDW------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
G+ G +AG+ ++ GAGG+ RA+ +G ++G ++ + + +RA++L D
Sbjct: 109 -YGFIEGLKEIMPDIAGKRVLVIGAGGSSRAIIYGLLNQGVGKIYLANRTIKRAENLIED 167
Query: 411 VMGAARPFE--------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFD 462
R + D +N + ++ N T +G++ + + + V D
Sbjct: 168 FSNFYRIVKMIIKPISLDEINRILNEVELIVNTTSVGLNEDDPEI-FDYNLINSSHTVVD 226
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+Y +T+LL+ A+ A +G M + Q F ++TGK AP E M+
Sbjct: 227 IIY--EETKLLQKAKEKNANYQNGYPMLIYQGAKSFEIWTGKPAPIEVMK 274
>gi|375361468|ref|YP_005129507.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451347892|ref|YP_007446523.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
gi|371567462|emb|CCF04312.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449851650|gb|AGF28642.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens IT-45]
Length = 303
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGVDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 407 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEIKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|403237574|ref|ZP_10916160.1| shikimate 5-dehydrogenase [Bacillus sp. 10403023]
Length = 281
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 131/285 (45%), Gaps = 23/285 (8%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
KV+G+I P+ HS P + N F + Y V +K G +V
Sbjct: 3 KVYGVIGNPISHSMSPAMLNDMFETYHIEARYHAFHVQTGQVKAAIEGIRGLGVYGINVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K V+ + DEV +A I AVNTI+ +GKLIGYNTD I ++ I +
Sbjct: 63 IPHKVEVIDYLDEVEEVAANIGAVNTIVNE--NGKLIGYNTDGNGFIRSLNRVISNEELR 120
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 415
+ ++ GAGGA R + + G +++ I + ERAK + D
Sbjct: 121 SANV-----------LIVGAGGAARGIFISLAAMGVSKIDIVNRTIERAKGIIDDCRFEV 169
Query: 416 RPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
L+F+ + + ++ N T +GMHPN D P+S E L +V D +Y P +T
Sbjct: 170 ESHP--LSFKEAEASLSKYQVVVNTTSVGMHPNVDDTPLSVENLAPKTIVSDIIYNPFET 227
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+ L+DA GAI +G+ MF+ Q F +TG + M +V
Sbjct: 228 KFLRDAAKYGAITQNGIGMFVYQGALAFEKWTGIFPDTDRMERLV 272
>gi|260592406|ref|ZP_05857864.1| shikimate dehydrogenase [Prevotella veroralis F0319]
gi|260535642|gb|EEX18259.1| shikimate dehydrogenase [Prevotella veroralis F0319]
Length = 250
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 299
+GLI P+GHS N F + N N Y+ + ++ F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFDNENINARYINFEIPSIEDFIEVIDSNPELRGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK---LIGYNTDCEASITAIEDAIKERGYK 356
KE V+ + D + P A AI AVN +IR GK L G+N+D +IE + ER +K
Sbjct: 64 KEQVIPYLDSLSPEATAIGAVN-VIRVTHKGKKTQLKGFNSDVIGFTRSIEPLL-ERHHK 121
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
++ G GGA +A+ FG KS G K ++
Sbjct: 122 KA-------------LILGTGGASKAIDFGLKSLGLE----------TKFVSRTKRDGIL 158
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKD 475
+EDI + ++ N TPLGM+PN D P + E + + L++D +Y P +T +
Sbjct: 159 CYEDITADIIREYNVIVNCTPLGMYPNVDSCPKLPYEAMDSHTLLYDLLYNPDETLFMTK 218
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
GA++ +G+EM L QA + + GKE
Sbjct: 219 GREQGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|182624165|ref|ZP_02951952.1| shikimate 5-dehydrogenase [Clostridium perfringens D str. JGS1721]
gi|177910781|gb|EDT73141.1| shikimate 5-dehydrogenase [Clostridium perfringens D str. JGS1721]
Length = 271
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + G GGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGTGGAARSILKYLEDSKAKKIVLVSRDKEKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PNT+ V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNTNSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|291551354|emb|CBL27616.1| shikimate dehydrogenase [Ruminococcus torques L2-14]
Length = 293
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 145/303 (47%), Gaps = 48/303 (15%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY---------VPMFVDDLKKFF 282
+ I T + LI PVGHS P ++N FR+ N + Y VP +D ++ F
Sbjct: 3 QRIKGTTGLLALIGSPVGHSGSPDMYNFCFRYHNLDYSYMAFDIKEDQVPAALDAMRLF- 61
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
G +V P K A + DE+ P A+ I AVNTI+ +GKLIG+ TD
Sbjct: 62 ------KMRGCNVTMPCKTAAAQNMDELSPAARIIGAVNTIVNE--NGKLIGHMTDGIGF 113
Query: 343 ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID- 400
+ + D G + G+ V+ GAGGA A+ GA + IF+ D
Sbjct: 114 VENLRD-------------HGVDVKGKKLVILGAGGAATAIQVQCALDGATSISIFNPDD 160
Query: 401 --FERAKSLASDVMGAARPFEDILNF----------QPEKGAILANATPLGMHPNTDRVP 448
+RAK A+ + P ++ F + EK IL N T +GM P+ DR P
Sbjct: 161 PFLDRAKGTAAKLKNEV-PDCNVQVFCLDDPGKLKEEIEKADILVNGTLVGMKPHEDRSP 219
Query: 449 VSEETL-RDYQLVFDAVYTPRKTRLLKDAEAAG-AIIVSGVEMFLRQAIGQFNLFTGKEA 506
++++++ R +V D VY P +T+LL++A+ AG A + G M L Q + + L+TG +
Sbjct: 220 ITDKSVFRSDLIVCDVVYNPEETKLLREAKEAGCAKTIGGKGMLLWQGVAAYKLYTGLDM 279
Query: 507 PKE 509
P E
Sbjct: 280 PVE 282
>gi|220931440|ref|YP_002508348.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
gi|254806746|sp|B8D2C6.1|AROE_HALOH RecName: Full=Shikimate dehydrogenase
gi|219992750|gb|ACL69353.1| shikimate 5-dehydrogenase [Halothermothrix orenii H 168]
Length = 289
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 147/290 (50%), Gaps = 29/290 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T+V GL+ P+GHS P +HN ++ + N +Y+P+ + D LK+ + +F G +V
Sbjct: 6 TQVVGLMGYPLGHSMSPAMHNRAYKDLGINYVYLPLEIKPDFLKEGIEGLRAFNFRGVNV 65
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ LA I AVNTI+ + GKL GYNTD +ED
Sbjct: 66 TIPYKEKVIPYLDEIDRLAGEIGAVNTIVN--NGGKLKGYNTDALGFKKMLED------- 116
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIFDIDFERAKSLAS----- 409
SF + G V+ GAGGA RA+ A A+ + + + + ++A L
Sbjct: 117 ---DCSF--EIKGTKAVIIGAGGASRAVGAVLAREGASEIFLLNRTLKKAAKLVGIWNKT 171
Query: 410 --DVMGAARPFEDILNFQP--EKGAILANATPLGMHPNTDRVPV-SEETLRDYQLVFDAV 464
+ A P ++ + P ++ ++ + TP+GM P PV ++E + LV D V
Sbjct: 172 YPGIKTVALPLDED-KYLPVVKRCDVIIDTTPVGMAPGIKGGPVIAKEAITRDTLVVDLV 230
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
Y P +T L+K GA ++G M + QA F L+TG + P+ F++ +
Sbjct: 231 YNPPETTLIKAGRQVGARTMNGFPMLIYQAAYAFKLWTGIK-PELFIKPV 279
>gi|410725322|ref|ZP_11363756.1| shikimate 5-dehydrogenase [Clostridium sp. Maddingley MBC34-26]
gi|410601974|gb|EKQ56468.1| shikimate 5-dehydrogenase [Clostridium sp. Maddingley MBC34-26]
Length = 270
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 20/265 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 298
+GLI + + HS P +HN F+ + G Y V+ +L K + G +V P
Sbjct: 4 YGLIGEKLSHSLSPKIHNTLFKALEIEGAYKLFEVEKENLSKLMDSLKLLKIKGVNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK+ VMK+ D + A+ I AVNTI + D KL GYNTD T + + N
Sbjct: 64 YKQDVMKYLDFISDEAKKIGAVNTIYLK--DNKLYGYNTDYFGFGTILNN--------NN 113
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
A + + ++ G GGA +A+ G + + + S +D + +
Sbjct: 114 IA-----VKDNIAMVLGNGGAAKAVINYLLDNGIKKIYLVSRKIKDNSSYNDKRIEYKTY 168
Query: 419 EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEA 478
EDI + KG IL N TPLGM+PN D PV+E+ + +Y + D +Y P++T+ LK
Sbjct: 169 EDISDI---KGDILINTTPLGMYPNIDNTPVNEDVISNYGSLVDIIYNPKETKFLKIGRT 225
Query: 479 AGAIIVSGVEMFLRQAIGQFNLFTG 503
+ G+EM + QAI ++ G
Sbjct: 226 LNKKVCGGIEMLVGQAIKAEEIWQG 250
>gi|375309511|ref|ZP_09774792.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
gi|375078820|gb|EHS57047.1| shikimate 5-dehydrogenase [Paenibacillus sp. Aloe-11]
Length = 290
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 136/285 (47%), Gaps = 22/285 (7%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+ G++ P+ HSK P++H + G +VP+ V D L+ + F G +V
Sbjct: 16 LLGVLGDPIKHSKSPLMHKIALQAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 75
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K VMK+ DE+ A+ I AVNTI+ +G+L GYNTD + R K
Sbjct: 76 PHKVEVMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYV---------RSLKE 124
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAAR 416
T+ L G + GAGGA R + + R V+I + E+A+ LA + A
Sbjct: 125 ETSV---ELKGAKIAVLGAGGAARGVIHALLEERPESVMILNRTREKAEQLAKEWTTEAI 181
Query: 417 PFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
P N + + +L N T +GM P +D +P+ + +V D +Y P +TRL
Sbjct: 182 PVTGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDLIYNPLETRL 241
Query: 473 LKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
L+++ E G I+ G+ MF+ Q F FTG + MR VL
Sbjct: 242 LRESREQRGCIVHGGLGMFVYQGAVAFEYFTGIAPAVDQMRAAVL 286
>gi|385799748|ref|YP_005836152.1| shikimate 5-dehydrogenase [Halanaerobium praevalens DSM 2228]
gi|309389112|gb|ADO76992.1| shikimate 5-dehydrogenase [Halanaerobium praevalens DSM 2228]
Length = 303
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 30/294 (10%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAG 292
N +T ++GL+ + + HS P LHN FR +N N +Y+ + DL + + + F+G
Sbjct: 7 NNETNLYGLLGRDLSHSISPSLHNNGFRDLNINAVYLMLESKEKDLANYIDSLKTLGFSG 66
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
++V PYKEA++ + + LA+A AVNT++ R G+L GYNTD IE++
Sbjct: 67 WNVTLPYKEAIIPYLNGFSSLARASGAVNTVLNR--RGRLTGYNTDVIGFQRQIEES--- 121
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDV 411
G + + V+ GAGG RA +A + + A ++I + ++A+ LA +
Sbjct: 122 ----------GVKVKNKKAVVIGAGGGARAVIAALVQLKLAEIMIINRSVDQAEKLAG-L 170
Query: 412 MGAARPFE--DILNFQPEKGA-------ILANATPLGMHPNT--DRVPVSEETLRDYQLV 460
P + D + + + A ++ + TP+GM+ + ++ + L + QLV
Sbjct: 171 FREENPEQNFDFCSLEENEYASYLKTADLVVDTTPVGMYNCQIEKELVINPDYLNENQLV 230
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
D VY P KT++L +AE GA I +G+ + QA F L+T + PK+ +I
Sbjct: 231 IDLVYNPLKTKILAEAEKRGAQIGNGLPTLIYQAEASFKLWTQEMPPKKKWYQI 284
>gi|365905896|ref|ZP_09443655.1| shikimate 5-dehydrogenase [Lactobacillus versmoldensis KCTC 3814]
Length = 297
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 135/301 (44%), Gaps = 31/301 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T + GL PVGHS P ++N +F+ N Y+ + D + T
Sbjct: 4 QIDGHTVMLGLFGSPVGHSGSPAMYNYSFQKAGINDSYLAFDIQEDQTAQALETMKFLHM 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G SV P K K D++ P A+ I AVNTI DG L G+NTD
Sbjct: 64 RGASVTMPCKTEAAKLVDKLSPAAKLIGAVNTITN--DDGVLTGHNTDG----------- 110
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IF---DIDFERAKS 406
+GY G G+ F L GAGGA A+A G + + IF D F+ A+
Sbjct: 111 --KGYVENLKQNGVDPKGKTFTLLGAGGASTAIAVQLALDGVKEIHIFNPKDSFFKNAEL 168
Query: 407 LASDVMGAARPF---------EDILNFQPEKGAILANATPLGMHPNTDRVPVSE-ETLRD 456
A + A ++ LN + +LANAT GM PN D+ + RD
Sbjct: 169 TAEKISKAVDTCKVTVGDINDQEQLNQSIAESDVLANATKAGMAPNVDQSNIKNLSVFRD 228
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY+P T+++ DA+A G+ + G M + Q + LFTG++ P + ++ +
Sbjct: 229 DLVVTDTVYSPEVTKMMADAKAHGSKTIGGKGMLVWQGAAAYKLFTGQDMPVDDVKRLFF 288
Query: 517 A 517
+
Sbjct: 289 S 289
>gi|386585864|ref|YP_006082266.1| shikimate 5-dehydrogenase [Streptococcus suis D12]
gi|353738010|gb|AER19018.1| shikimate 5-dehydrogenase [Streptococcus suis D12]
Length = 289
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 406
K RG++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 407 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 457
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVPMQVLVLDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
LV D +Y P +T LLK A++ G ++G+ M L QA F +TGKE P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQAWTGKEMPTDLIWDQLVQ 284
Query: 518 KF 519
K+
Sbjct: 285 KY 286
>gi|422413795|ref|ZP_16490754.1| shikimate dehydrogenase, partial [Listeria innocua FSL S4-378]
gi|313617612|gb|EFR89917.1| shikimate dehydrogenase [Listeria innocua FSL S4-378]
Length = 222
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 124/239 (51%), Gaps = 39/239 (16%)
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P K V+K+ DE+ P A+ I AVNTII DGKL G+ TD G
Sbjct: 1 VTMPCKSEVLKYMDELSPSARMIGAVNTIINE--DGKLTGHITDG-------------LG 45
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAK-SLAS 409
+ + G +AG+ + GAGGA A+ GA+ + IF+I +E+AK ++AS
Sbjct: 46 FASNLRDSGVDVAGKKMTIIGAGGAATAIQVQCALDGAKEIAIFNIKDDFYEKAKQTIAS 105
Query: 410 -------------DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL-R 455
D+ AA+ E+I IL NAT +GMHP+ + PV + T+ R
Sbjct: 106 IKQEVPDCIVHIYDLNDAAKLHEEIATSD-----ILVNATLVGMHPHENETPVKDTTVFR 160
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V D VY P+KTRLL DAEAAG+ + G+ M L Q + LFTGK+ P ++++
Sbjct: 161 KDLIVTDVVYNPKKTRLLLDAEAAGSKTIGGLGMLLWQGAEAYKLFTGKDMPVSEVKDL 219
>gi|171690198|ref|XP_001910024.1| hypothetical protein [Podospora anserina S mat+]
gi|327507669|sp|B2B223.1|ARO1_PODAN RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|170945047|emb|CAP71158.1| unnamed protein product [Podospora anserina S mat+]
Length = 1567
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 218/513 (42%), Gaps = 76/513 (14%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR-LEAL 91
G+D VE+R+D + + P + ++ + +P++ R GG + D++KR LE
Sbjct: 1069 GSDAVELRVDLLESLNPEFVATQVALLRSAAKIPIVYTIRTISQGGKFPDDDYKRALELY 1128
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP-SEEDLGYLVSRMQ 150
+ G +Y+D E+ + ++L Q + G I++ + D E S ++ G++ +
Sbjct: 1129 QIGLRTGVEYLDLEMTMPEDVL--QTVTETKGFTHIIASHHDPENKLSWKNGGWIPFYNK 1186
Query: 151 ATG-ADIIKLVFSVNDITEIARI----FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
A D+IKLV ++++ + ++L + PIIA ++G G +S++L NG
Sbjct: 1187 ALQYGDVIKLVGMAREVSDNFDLTNFKMRMLEAHKKPIIALNMGTAGKLSRVL----NGF 1242
Query: 206 LVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFR 262
L S P P + +RQ + + K F L KP+ S+ P LHN F
Sbjct: 1243 LTPVSHPALPSKAAPGQLSAAEIRQALSLVG-ELEPKSFYLFGKPISSSRSPALHNGLFA 1301
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
Y D S DF G SV P K ++ DEV A AI AVNT
Sbjct: 1302 QTGLPHQYSLFETDVAADVKDIIRSADFGGASVTIPLKLDIIPLLDEVSDAATAIGAVNT 1361
Query: 323 IIRRPSDGK----LIGYNTDCEASITAIEDA-IKERGYKNGTASFGSPLAGRMFVLAGAG 377
+I +G L G NTD + ++ A I R N P AG ++ G+G
Sbjct: 1362 VIPVSPEGSDKTILRGDNTDWMGMVFSLRQAGIAPRTKTN-------PGAG---MVVGSG 1411
Query: 378 GAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANAT 436
G RA + G + + I +R K++A PE I +T
Sbjct: 1412 GTTRAAVYALHDLGYSPIHIVARSPDRVKAIADSF--------------PEDYNIQTLST 1457
Query: 437 PLGMHPNTDRVPVS-----------EETLRDY---------------QLVFDAVYTPRKT 470
P + TD +P ++++R+ +++ + YTPR T
Sbjct: 1458 PEEVKAATDALPTVVISSIPADKPIDQSMREVLVASLRHPAKSEKEPRVLLEMAYTPRHT 1517
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
L++ AE AG + G+E+ Q QF L+TG
Sbjct: 1518 PLMQLAEDAGWKTIPGLEVLAAQGWYQFQLWTG 1550
>gi|325090339|gb|EGC43649.1| 3-dehydroquinate synthase [Ajellomyces capsulatus H88]
Length = 1574
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 225/536 (41%), Gaps = 78/536 (14%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1055 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRASVPLVFTIRTKGQGGRFPDDAY 1114
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1115 DAALQLYRLAVRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGQLSWVNGS 1172
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV I + + + + + VPIIA ++G++G +S++L
Sbjct: 1173 WIQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML 1232
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + K F +I PV S+ P +
Sbjct: 1233 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKAKKFAVIGNPVSASRSPAM 1288
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN FR + Y + D+ + SPDF G SV P K ++M DE+ P A +
Sbjct: 1289 HNTLFRQMGLPHTYGTLETDNPEVAKEFIRSPDFGGASVTIPLKLSIMPLLDEIAPEAMS 1348
Query: 317 IAAVNTIIRRP--SDGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
I AVNTI+ P DGK LIG+NTD + + + DA TAS G
Sbjct: 1349 IGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAG------ 1402
Query: 370 MFVLAGAGGAGRALAFGAKSRG---------------ARVVIFDID--------FERAKS 406
++ G GG RA F ++ G + F D E ++
Sbjct: 1403 --LVIGGGGTARAAIFALQNMGYSPIYVLGRSPDKLSSMTSTFHTDHDIRDLRRLESSRI 1460
Query: 407 LASDVMGAA---RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVF 461
L + +G +P E P IL L N+D +E+ + +++
Sbjct: 1461 LPTVAIGTIPGDKPIE------PHMREILCRLFDLCEKANSD----TEQARGVSTKRILL 1510
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
+ Y P T L++ A +G ++ G+E + Q + Q +T E+ R V+
Sbjct: 1511 EMAYKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTNITPVYEYARNAVMG 1566
>gi|219853166|ref|YP_002467598.1| shikimate 5-dehydrogenase [Methanosphaerula palustris E1-9c]
gi|219547425|gb|ACL17875.1| shikimate 5-dehydrogenase [Methanosphaerula palustris E1-9c]
Length = 457
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 23/274 (8%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
G+ P HS P ++ F + Y + + + + + + G SV P+KE
Sbjct: 206 GIAGFPASHSISPQMYAALFARFGLDYRYTRIEWPSIAEIIAVFRAGRLRGLSVTIPFKE 265
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
V+ D + P A AI AVNT++R +L G+NTD ++ ER
Sbjct: 266 QVIPLLDTIDPDATAIGAVNTVVR--CGDELAGFNTDWLGVRKPLQQHRGERA------- 316
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 421
VL GAGGA A A+ KS G + I + ER + LA+ + P
Sbjct: 317 ----------VLIGAGGAAAAAAYALKSLGMDLTILNRTEERGRVLAARFDCSTAPLSRF 366
Query: 422 LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGA 481
+ PE ++ +ATP+GMHP+T + ++ L + VFD VYTPR T LL++AEAAGA
Sbjct: 367 GDLDPE---VVVHATPVGMHPDTGTL-LTRADLDEGMTVFDLVYTPRMTPLLREAEAAGA 422
Query: 482 IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
++ G EMF+ QA QF FTG + + +R ++
Sbjct: 423 WVIPGTEMFIHQACAQFEHFTGIQVSPDLVRGVI 456
>gi|425737431|ref|ZP_18855704.1| shikimate 5-dehydrogenase [Staphylococcus massiliensis S46]
gi|425482779|gb|EKU49935.1| shikimate 5-dehydrogenase [Staphylococcus massiliensis S46]
Length = 265
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 135/282 (47%), Gaps = 28/282 (9%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
F +I P+ HS P++H+ F+ +N + Y + V D+ +S GF+V P
Sbjct: 3 FAVIGHPIDHSLSPVMHHANFQALNLDYGYEALNVPPKDMHLIKEIITSKGLDGFNVTIP 62
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+K +M + D + + AI AVNT+ + +GK IGYNTD GY G
Sbjct: 63 HKTEIMSYLDVIDEASCAIGAVNTV--KIENGKWIGYNTDG-------------IGYVKG 107
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAARP 417
L R ++ GAGGA + +A K +V + + R S DV +
Sbjct: 108 LIELDLHLKHRKILILGAGGASKGIAHALDKITEHKVTVANRTLSRFDSWQLDVHTMS-- 165
Query: 418 FEDILN---FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
LN + ++ I+ N TPLGM N + +P+ L+ LV D VYTP +T LK
Sbjct: 166 ----LNEAALELDQFDIVINTTPLGMKDNQE-LPIELTNLKRGALVSDIVYTPSETPFLK 220
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
A+A G I +G++MF++Q F ++TG A E M+ V+
Sbjct: 221 AAKAQGNPIYNGLDMFVQQGAESFKIWTGHTADIEAMKNKVI 262
>gi|150261273|pdb|2HK7|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261274|pdb|2HK7|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Mercury At 2.5 Angstrom
Resolution
gi|150261275|pdb|2HK8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261276|pdb|2HK8|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261277|pdb|2HK8|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261278|pdb|2HK8|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261279|pdb|2HK8|E Chain E, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261280|pdb|2HK8|F Chain F, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261281|pdb|2HK8|G Chain G, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
gi|150261282|pdb|2HK8|H Chain H, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus At 2.35 Angstrom Resolution
Length = 269
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 31/280 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E + + ++ GAGGA RA+ + GA+V +++ E+A LA
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 166
Query: 412 MGAARPFEDILNFQPE----KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
P E ++N PE K ++ N T +G+ + D + + ++ +V D +Y
Sbjct: 167 -----PLE-VVN-SPEEVIDKVQVIVNTTSVGLK-DEDPEIFNYDLIKKDHVVVDIIY-- 216
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
++T+LLK A+ GA ++ G+ M L Q I F ++ G E P
Sbjct: 217 KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 256
>gi|150261283|pdb|2HK9|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261284|pdb|2HK9|B Chain B, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261285|pdb|2HK9|C Chain C, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
gi|150261286|pdb|2HK9|D Chain D, Crystal Structure Of Shikimate Dehydrogenase From Aquifex
Aeolicus In Complex With Shikimate And Nadp+ At 2.2
Angstrom Resolution
Length = 275
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 31/280 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 8 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 67
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 68 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 125
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E + + ++ GAGGA RA+ + GA+V +++ E+A LA
Sbjct: 126 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 172
Query: 412 MGAARPFEDILNFQPE----KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
P E ++N PE K ++ N T +G+ + D + + ++ +V D +Y
Sbjct: 173 -----PLE-VVN-SPEEVIDKVQVIVNTTSVGLK-DEDPEIFNYDLIKKDHVVVDIIY-- 222
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
++T+LLK A+ GA ++ G+ M L Q I F ++ G E P
Sbjct: 223 KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 262
>gi|322391590|ref|ZP_08065059.1| shikimate dehydrogenase [Streptococcus peroris ATCC 700780]
gi|321145673|gb|EFX41065.1| shikimate dehydrogenase [Streptococcus peroris ATCC 700780]
Length = 284
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 142/307 (46%), Gaps = 47/307 (15%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F N NG+Y+ V+ DL + +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNSAFEATNTNGVYLAWEVEATDLAETVANIRRYQMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYKE V+ + D++ A+ I AVNT++ R +G LIGYNTD
Sbjct: 63 GINLSMPYKEQVIPYLDQLSEEARLIGAVNTVVNR--EGTLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+G+ SF ++G+ VL GAGGA +A+ A G + F R+ SL
Sbjct: 109 -KGFFKSLPSF--KISGKRMVLLGAGGAAKAILTQAILDGVSQISV---FVRSASLEK-- 160
Query: 412 MGAARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSEE 452
RP+ ED Q + +L NAT +GM + +P
Sbjct: 161 ---TRPYLKKLQIETGFKVDLFALEDSQKLQDSITQADLLVNATSVGMDGTSQPIPTGI- 216
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
L LV D +Y P +T LK A + G +G+ M L QA F L+TGKE P + +
Sbjct: 217 VLPKQLLVADVIYQPFETPFLKWARSQGNHAFNGLGMLLYQAAEAFELWTGKEMPTDQIW 276
Query: 513 EIVLAKF 519
E++ K+
Sbjct: 277 ELLKQKY 283
>gi|385263902|ref|ZP_10041989.1| shikimate dehydrogenase [Bacillus sp. 5B6]
gi|385148398|gb|EIF12335.1| shikimate dehydrogenase [Bacillus sp. 5B6]
Length = 303
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELANSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGVDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 407 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCQTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|418977324|ref|ZP_13525148.1| shikimate dehydrogenase [Streptococcus mitis SK575]
gi|383350027|gb|EID27931.1| shikimate dehydrogenase [Streptococcus mitis SK575]
Length = 284
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF + G+ L GAGGA +++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVFELQARIAESDLLVNATSVGMDGKSSPVPESI-VLSETLLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|134045782|ref|YP_001097268.1| shikimate 5-dehydrogenase [Methanococcus maripaludis C5]
gi|132663407|gb|ABO35053.1| shikimate dehydrogenase [Methanococcus maripaludis C5]
Length = 280
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 148/289 (51%), Gaps = 27/289 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TK+ GLI PV HS PI+HN + N Y+ V ++LK + + A
Sbjct: 3 IDSKTKLLGLIGHPVDHSFSPIMHNAAIEDLGINYRYLAFDVSEENLKDVVAGAKAFQIA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K +MK+ DE+ A+AI AVNT+ + +GK IGYNTD + A+E+
Sbjct: 63 GFNITIPHKMNIMKYLDEIDDDAKAIGAVNTV--KIENGKAIGYNTDGIGAKKALEE--- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
K G + ++ G+GG RA+++ ++ ++ I + + E+AK L+ ++
Sbjct: 118 ----KTGILIN------KNILIIGSGGGSRAVSY-ELAKENKLTIINRNIEKAKILSEEL 166
Query: 412 MGAARPFEDI----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ---LVFDAV 464
+ I LN + I+ N TP+GM+PN + PV L D + +V D +
Sbjct: 167 SKNLKKQNSITYGDLNVDIKDFDIIINTTPVGMYPNMNVKPVI--PLNDIKYGAVVMDLI 224
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
Y P + LK+A GA ++G+ M + Q F ++ GK+ M++
Sbjct: 225 YNPLEPVFLKEAIKYGAETINGIGMLVYQGAVSFEIWAGKKPDVYVMKK 273
>gi|300727225|ref|ZP_07060641.1| shikimate dehydrogenase [Prevotella bryantii B14]
gi|299775463|gb|EFI72057.1| shikimate dehydrogenase [Prevotella bryantii B14]
Length = 250
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 127/272 (46%), Gaps = 34/272 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYS-SPDFAGFSVGFPY 299
+GLI P+GHS N F N + Y + +++ +P+ G +V PY
Sbjct: 4 YGLIGFPLGHSFSKNYFNQKFADENIDAEYANYEIPNIENLSEVLDLNPELKGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
KE V+ + D + P A+AI AVN I + D L G+N+D +IE IK
Sbjct: 64 KEKVISYLDNISPEARAIGAVNVIRITHKGKDTILKGFNSDVIGFTRSIEPLIK------ 117
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
P + +L G GGA +A+ +G KS G V F +ER ++
Sbjct: 118 -------PHHKKALIL-GTGGASKAINYGLKSLGLETV-FVSRYERPGTIQYQ------- 161
Query: 418 FEDILNFQPE---KGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLL 473
N PE + ++ N TP GM+PN D P + + L D L++D +Y P +T +
Sbjct: 162 -----NITPEIIKEYNVIVNCTPCGMYPNVDECPDIPYDALNDKCLLYDLLYNPDETLFM 216
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
K A GA++ +G+EM L QA + + GKE
Sbjct: 217 KKGAAKGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|289582440|ref|YP_003480906.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
gi|289531993|gb|ADD06344.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
Length = 280
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 142/293 (48%), Gaps = 28/293 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 296
VFGL+ PVGHS P +H + + Y+ YV DL+ + + G +V
Sbjct: 4 DVFGLLGNPVGHSLSPPMHEAAYDELAYDARYVTFEPAPTDLETAITGADALGITGLNVT 63
Query: 297 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAIED 348
P+K+ V+ D V P LA I AVNTI P S G+ G+NTD ++ A+
Sbjct: 64 IPFKQDVLDL-DLVEPDELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRAL-- 120
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 408
+E +AG V+ GAGGAGRA++F GA V I + A LA
Sbjct: 121 --REHDVT---------IAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHDLA 169
Query: 409 SDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+DV A D +L + +L NAT +GM D PV + L V DAVY
Sbjct: 170 ADVPDATGHGLDGTVLESLLAEADVLVNATSVGME--EDATPVPADALHGELTVMDAVYQ 227
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL+DA AAGA V G M L Q + F L+TG++AP M E + A+
Sbjct: 228 PLETRLLRDAAAAGATTVDGAWMLLFQGVEAFELWTGQDAPVGVMNEALRARL 280
>gi|417090798|ref|ZP_11956121.1| shikimate 5-dehydrogenase [Streptococcus suis R61]
gi|353533416|gb|EHC03071.1| shikimate 5-dehydrogenase [Streptococcus suis R61]
Length = 289
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAKS- 406
K RG++ + + + G GGA A+ A GA+ + IF ER ++
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 407 -----LASDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 457
A+ V ED +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVSMRVLALEDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
LV D +Y P +T LLK A++ G ++G+ M L QA F +TGKE P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQAWTGKEMPTDLIWDQLVQ 284
Query: 518 KF 519
K+
Sbjct: 285 KY 286
>gi|448282140|ref|ZP_21473429.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
gi|445576774|gb|ELY31222.1| shikimate 5-dehydrogenase [Natrialba magadii ATCC 43099]
Length = 278
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 142/293 (48%), Gaps = 28/293 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 296
VFGL+ PVGHS P +H + + Y+ YV DL+ + + G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELAYDARYVTFEPAPTDLETAITGADALGITGLNVT 61
Query: 297 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAIED 348
P+K+ V+ D V P LA I AVNTI P S G+ G+NTD ++ A+
Sbjct: 62 IPFKQDVLDL-DLVEPDELATRIGAVNTIDFEPDSSRSNSSGRATGHNTDAAGALRAL-- 118
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 408
+E +AG V+ GAGGAGRA++F GA V I + A LA
Sbjct: 119 --REHDVT---------IAGADAVVVGAGGAGRAISFALADAGATVAIANRTESTAHDLA 167
Query: 409 SDVMGAARPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+DV A D +L + +L NAT +GM D PV + L V DAVY
Sbjct: 168 ADVPDATGHGLDGTVLESLLAEADVLVNATSVGME--EDATPVPADALHGELTVMDAVYQ 225
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL+DA AAGA V G M L Q + F L+TG++AP M E + A+
Sbjct: 226 PLETRLLRDAAAAGATTVDGAWMLLFQGVEAFELWTGQDAPVGVMNEALRARL 278
>gi|313901109|ref|ZP_07834597.1| shikimate dehydrogenase [Clostridium sp. HGF2]
gi|346314397|ref|ZP_08855918.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 2_2_44A]
gi|373121312|ref|ZP_09535180.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 21_3]
gi|422327326|ref|ZP_16408353.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|312954067|gb|EFR35747.1| shikimate dehydrogenase [Clostridium sp. HGF2]
gi|345906755|gb|EGX76479.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 2_2_44A]
gi|371663631|gb|EHO28818.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 6_1_45]
gi|371665330|gb|EHO30495.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 21_3]
Length = 290
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I+ T++ GLI+ P+ HSK P +HN F + + Y+ V ++L+ + +
Sbjct: 3 ERISGHTELIGLIATPIRHSKSPKMHNEAFAKLGLDYAYLAFEVGNEELEDAVKGFKALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + ++ D + P A+ AVNT++ +G L G+ TD + +++DA
Sbjct: 63 VRGYNVSMPNKTVIGQYLDHLSPAAELCGAVNTVVN--DNGVLTGHITDGIGYMRSLKDA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERA- 404
G AG+ + GAGGA A+ G + + IF D +ERA
Sbjct: 121 -------------GIEPAGKKVTITGAGGAATAIEIQMALDGVKEISIFNRRDEFWERAE 167
Query: 405 ---KSLASDVMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
K++ A F+ + + E + ANAT +GM P ++ + + + LR
Sbjct: 168 QNVKNINEKTSCKATLFDLADTEAFKREIEDSYLFANATGVGMKPLEGQMVIPDASFLRK 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY P +T LL+ A+ G ++G+ M L Q F L+TGKE P ++M+EI+
Sbjct: 228 DLIVTDVVYMPTETELLRVAKEVGCKTMNGLGMMLYQGAAAFELWTGKEMPIDYMKEILD 287
Query: 517 AKF 519
KF
Sbjct: 288 IKF 290
>gi|87301533|ref|ZP_01084373.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
gi|87283750|gb|EAQ75704.1| shikimate / quinate 5-dehydrogenase [Synechococcus sp. WH 5701]
Length = 312
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 44/299 (14%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDF 290
I+A T + ++ P+ HS P +HN R + + +Y+ P+ +DL + D
Sbjct: 4 EISAHTSLVAVLGDPIRHSLSPAMHNAALRQLGLDWVYLALPVQANDLAVVVRALEAIDC 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P+K AV + E+ PLA+ + AVNT++RR G L G NTD E + +
Sbjct: 64 RGLNVTLPHKRAVAELAAELTPLARRVGAVNTLVRREGGGWL-GTNTDVEGFLAPL---- 118
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAK----- 405
RG N LAG ++ G GG+ RA+ + ++ ER +
Sbjct: 119 --RGIANAEGVSVPDLAGGRALVLGCGGSARAVV---------AALVELGLERIQLAGRR 167
Query: 406 ------------SLASDVMGAARPFE-----DILNFQPEKGAILANATPLGMHPNTDRVP 448
S A+ + G A P D++ E ++ N TP+GM ++ P
Sbjct: 168 PDALAAFQAECGSWAAQLSGVAWPAAAGERGDLIKALAEAD-LVVNTTPVGMGASSSACP 226
Query: 449 VSE---ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK 504
+ + LR L++D +YTPR +RLL++ G ++ G+EM ++Q L+ G+
Sbjct: 227 LDAAELDALRAGSLIYDLIYTPRPSRLLQEGRQRGCGVLDGLEMLVQQGAAALRLWLGE 285
>gi|212694466|ref|ZP_03302594.1| hypothetical protein BACDOR_03994 [Bacteroides dorei DSM 17855]
gi|237711195|ref|ZP_04541676.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265750787|ref|ZP_06086850.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|423228191|ref|ZP_17214597.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|423239305|ref|ZP_17220421.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
gi|423243454|ref|ZP_17224530.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|212662967|gb|EEB23541.1| putative shikimate dehydrogenase [Bacteroides dorei DSM 17855]
gi|229455039|gb|EEO60760.1| shikimate 5-dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263237683|gb|EEZ23133.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392636974|gb|EIY30852.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T00C15]
gi|392645207|gb|EIY38939.1| shikimate 5-dehydrogenase [Bacteroides dorei CL02T12C06]
gi|392647092|gb|EIY40798.1| shikimate 5-dehydrogenase [Bacteroides dorei CL03T12C01]
Length = 246
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 28/268 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 297
K +GLI P+GHS N F N + YV + +K+ S ++PD GF+V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A AI AVN I+R+ KLIGYN+D +I D + E +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
K ++ G GGA +A+A+G K G +++L +++
Sbjct: 121 KKA-------------LILGTGGASKAIAYGLKKLGLECKFV------SRNLREEMLTYN 161
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 474
+ +I+ ++ ++ N TP+GM+P D P + + L L++D +Y P T +K
Sbjct: 162 QLTPEIM----DEYKVIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
GAI +G+EM L QA G ++++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|384264354|ref|YP_005420061.1| shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380497707|emb|CCG48745.1| Shikimate 5-dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 303
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 407 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCSTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|222529868|ref|YP_002573750.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
gi|254806728|sp|B9MKW9.1|AROE_ANATD RecName: Full=Shikimate dehydrogenase
gi|222456715|gb|ACM60977.1| shikimate 5-dehydrogenase [Caldicellulosiruptor bescii DSM 6725]
Length = 288
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 128/271 (47%), Gaps = 43/271 (15%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFSVGFP 298
LI K + HS P +HN + + IY + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEMLKEFVEMVRKDEDVVGFNITIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +++FCDEV + I A NT+ + DGKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKEDGKLLAYNTDW-------------IGFKRS 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARP 417
G + + ++ G+GGA +A +G GA+ V + + +E+A+ L
Sbjct: 111 LEDRGVDVKDKKILVLGSGGAAKACIYGLYRMGAKEVFVANRTYEKAEKLKE-------V 163
Query: 418 FEDILNFQPE--------KGAILANATPLGMHPNTDRVPVSEETLRDY-----QLVFDAV 464
F+DIL P K I+ N T +GM PN + P E +Y V+D +
Sbjct: 164 FQDILKILPVEWLRRYEFKYDIIINTTSVGMFPNIESSPFDFE---NYVAGVPVFVYDMI 220
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAI 495
Y P KT LK+AE G I +G++M + QAI
Sbjct: 221 YNPLKTAFLKEAEKKGIKIENGLKMLVYQAI 251
>gi|345515156|ref|ZP_08794662.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
gi|229434416|gb|EEO44493.1| shikimate 5-dehydrogenase [Bacteroides dorei 5_1_36/D4]
Length = 246
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 28/268 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 297
K +GLI P+GHS N F N + YV + +K+ S ++PD GF+V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGFNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A AI AVN I+R+ KLIGYN+D +I D + E +
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTKLIGYNSDVIGFTQSI-DPLLEPQH 120
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
K ++ G GGA +A+A+G K G +++L +++
Sbjct: 121 KKA-------------LILGTGGASKAIAYGLKKLGLECKFV------SRNLREEMLTYD 161
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 474
+ +I+ ++ ++ N TP+GM+P D P + + L L++D +Y P T +K
Sbjct: 162 QLTPEIM----DEYKVIVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
GAI +G+EM L QA G ++++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|302386967|ref|YP_003822789.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
gi|302197595|gb|ADL05166.1| shikimate 5-dehydrogenase [Clostridium saccharolyticum WM1]
Length = 290
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPD 289
+ I+ T + GLI PVGHS P ++N F + + Y+ + V+++ K +
Sbjct: 3 KRISGKTGLLGLIGSPVGHSGSPAMYNYCFEKLGLDYAYLAFDIQVEEVPKAMEAIRTFH 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K +K+ DE+ P A+ I AVNTI+ DGKL+G+ TD
Sbjct: 63 MRGCNVTMPCKNEAVKYMDELSPAARIIGAVNTIVN--EDGKLVGHITD----------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
G+ + G +AG+ ++ G GGA A+ GAR + IF D FER
Sbjct: 110 --GHGFVDNLRDHGVEIAGKKIIVCGGGGAAAAIQVQCALEGAREISIFNRKDGFFERTL 167
Query: 406 SLAS-------DVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETL-R 455
A D + D+ + E G+ ILANAT LGM P + + + T+ R
Sbjct: 168 QTAERIRQEKPDCIVNVYDIGDMETMRAEMGSSDILANATILGMKPMDNESVIKDVTMFR 227
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V DAVY P++T++LK+A+AAG ++G M + Q F L+TG E P E ++++
Sbjct: 228 PGLVVVDAVYNPKETKMLKEAKAAGCTCINGQGMLVWQGAEAFKLYTGLEMPVEEVKKL 286
>gi|329943069|ref|ZP_08291843.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|332287652|ref|YP_004422553.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|384450809|ref|YP_005663409.1| 3-dehydroquinate dehydratase [Chlamydophila psittaci 6BC]
gi|384451804|ref|YP_005664402.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|384453757|ref|YP_005666353.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|384454736|ref|YP_005667331.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|392376882|ref|YP_004064660.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|407454281|ref|YP_006733389.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|407456971|ref|YP_006735544.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
gi|313848225|emb|CBY17226.1| shikimate 5-dehydrogenase [Chlamydophila psittaci RD1]
gi|325506567|gb|ADZ18205.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 6BC]
gi|328814616|gb|EGF84606.1| shikimate 5-dehydrogenase [Chlamydophila psittaci Cal10]
gi|328914903|gb|AEB55736.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila psittaci 6BC]
gi|334692538|gb|AEG85757.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci C19/98]
gi|334693514|gb|AEG86732.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 01DC11]
gi|334694493|gb|AEG87710.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci 02DC15]
gi|405781040|gb|AFS19790.1| shikimate 5-dehydrogenase [Chlamydia psittaci 84/55]
gi|405784232|gb|AFS22979.1| shikimate 5-dehydrogenase [Chlamydia psittaci VS225]
Length = 477
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 218/499 (43%), Gaps = 55/499 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
L + + G+GGA +A+A GA++ IF+ A+ L+ G A P L
Sbjct: 327 NILLQNKHVGIVGSGGAAKAIATTFADSGAQISIFNRTKTHAEKLSVLCHGQAFP----L 382
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
N E I + L + P+ + + ++ D P+++ K A+ G
Sbjct: 383 NALSENHNI--DILILCLPPDVEIPEIYPP------VIIDINTLPKESLYTKKAKERGCQ 434
Query: 483 IVSGVEMFLRQAIGQFNLF 501
I+ G EMF QA+ QF+L+
Sbjct: 435 ILYGYEMFAEQALLQFSLW 453
>gi|340751883|ref|ZP_08688693.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
gi|229420848|gb|EEO35895.1| shikimate 5-dehydrogenase [Fusobacterium mortiferum ATCC 9817]
Length = 273
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 23/277 (8%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+GL+ K +GHS P +HN F + Y ++D K GF++ PYK
Sbjct: 4 YGLVGKKLGHSLSPEIHNYIFDKLGVEAEYSLYEIEDGKDILKLMEEKGIKGFNITIPYK 63
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E VM D + A+ I AVN + + +G+ GYN+D + +E
Sbjct: 64 EIVMSQLDFISEEAEKIGAVNLV--KIKNGESYGYNSDYYGVVEMLE------------- 108
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVMGAARP 417
+ G++ + G+GGA +++ GA+ VV D++ +R +
Sbjct: 109 KHDVKVKGKICYVLGSGGASKSVIVALHDLGAKEIVVVTRDVESKRRELKNRFRNIEVVS 168
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
+E+I+ G I+ N TPLGM+PN D P+ EE L+ + + D VY P+ T+ L+ A+
Sbjct: 169 YENIIG-----GDIVVNTTPLGMYPNIDSSPLDEEILKRFDIAVDIVYNPKTTKFLQLAK 223
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
V GV M + QAI L+ G + ++ E+
Sbjct: 224 NCSLKCVDGVSMLVGQAIKSDELWEGIDIDRDTREEV 260
>gi|317486523|ref|ZP_07945346.1| shikimate 5-dehydrogenase [Bilophila wadsworthia 3_1_6]
gi|316922198|gb|EFV43461.1| shikimate 5-dehydrogenase [Bilophila wadsworthia 3_1_6]
Length = 274
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 32/288 (11%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVGF 297
+ G+I P+GHS P++HN FR +N G+Y+ P+ L F + G S+
Sbjct: 9 LHGIIGYPLGHSMSPLMHNTAFRTLNLPGVYLSWPIEPGRLPAFVDAARLLNIRGCSITI 68
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG-KLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++ D+ + + A NT+ R DG K+ G NTD + +++R
Sbjct: 69 PHKIDIIPLLDKTSENVREMGACNTLYR---DGEKICGENTD----VIGFTAPLRKRSLS 121
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAA 415
T R+ VL GAGG RA G + G A + + + ERA++L ++
Sbjct: 122 PET---------RVLVL-GAGGVSRAAIAGLRRLGLANITLTNRRKERAEALCNEFGLLC 171
Query: 416 RPFEDILNFQPEKGAILA----NATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
P+E E+G + A N TPLGM + +D + +D +YTP +TR
Sbjct: 172 APWE-------ERGDVPADLIINTTPLGMTGAQEHETPYPRAFQDNGIAYDLIYTPFQTR 224
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
L+DA AAG VSG++MF+ Q QF+L+TG P+E + + A +
Sbjct: 225 FLRDAAAAGWETVSGLDMFIGQGDAQFHLWTGHHLPEEAITAVTSALY 272
>gi|387897283|ref|YP_006327579.1| shikimate dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387171393|gb|AFJ60854.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 294
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 67 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 407 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQAAGCSTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|294497741|ref|YP_003561441.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
gi|294347678|gb|ADE68007.1| shikimate 5-dehydrogenase [Bacillus megaterium QM B1551]
Length = 298
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 33/301 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
V IN T++ GL++ P+GHS P +HN F+ + N Y+ V D L+ +
Sbjct: 4 VGRINGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRAL 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ GF+V P K ++ F DE+ A+ AVNT++ +G L+G++TD
Sbjct: 64 NVKGFNVSMPNKTKILPFLDELADSAKFSGAVNTVVN--DNGVLVGHSTDG--------- 112
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---------- 397
GY G + G+ L G+GGA +A A G + IF
Sbjct: 113 ----MGYIRNLKEHGVDITGKKMTLIGSGGAATPIAIQAALEGLEELTIFARHDEFYSKA 168
Query: 398 ----DIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-E 452
I E K ++ + D+L + IL N T +GM P + + +
Sbjct: 169 VENVKIINEEMKHVSCKAKLYSLEDTDMLREEIRTSDILTNGTGVGMKPLEEFSIIEDIS 228
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
LR +V D VY P +++LL+ AE+ G ++G+ M + Q F L+TGKE P E+++
Sbjct: 229 MLRPDLIVTDVVYMPMRSKLLEQAESIGCHTINGIGMMIWQGAMAFELWTGKEMPVEYIK 288
Query: 513 E 513
E
Sbjct: 289 E 289
>gi|407464424|ref|YP_006775306.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
gi|407047612|gb|AFS82364.1| shikimate 5-dehydrogenase [Candidatus Nitrosopumilus sp. AR2]
Length = 273
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 26/290 (8%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
+K F +I P+ HS P +H+ FR +N + Y+ + +L + GF+V
Sbjct: 2 SKSFAVIGDPIDHSLSPNIHSAAFREMNLDSSYIAYRIPKGELAEGIEGLKKIKIDGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K +MK+ D++ I AVNT+ + DG L GYNTD + + + K++
Sbjct: 62 TIPHKIEMMKYLDKIDESCSLIGAVNTVSNK--DGVLKGYNTDMDGFL----EPFKKKEL 115
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLAS----- 409
K ++ +L GAGGA RA+ G AK + + I + E+AK L+
Sbjct: 116 K---------ISDTKVLLLGAGGAARAIVAGFAKEKAKSITIANRTLEKAKDLSKFAKSI 166
Query: 410 DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
+ A ED+ + I+ NAT +G+ + P+S + + + +V+D VY P
Sbjct: 167 GLDANAIKIEDVKESAKDYD-IIVNATSIGLR--NEPSPISLDGINEKTIVYDIVYMPMN 223
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
T +K+A+ +II+ G EM L QA+ F ++ G EAP M++ +L F
Sbjct: 224 TDFIKNAKEKKSIIIYGYEMLLGQAVRSFEIWHGIEAPYNAMKKALLGGF 273
>gi|110799915|ref|YP_695145.1| shikimate 5-dehydrogenase [Clostridium perfringens ATCC 13124]
gi|123148920|sp|Q0TT95.1|AROE_CLOP1 RecName: Full=Shikimate dehydrogenase
gi|110674562|gb|ABG83549.1| shikimate 5-dehydrogenase [Clostridium perfringens ATCC 13124]
Length = 271
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K+FGLI + +GHS P +HN F+ N +G+Y V D + G +V
Sbjct: 2 KLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYKE VM D + A+AI AVNTI+ + DGK GYNTD +E A
Sbjct: 62 IPYKEKVMDQLDIISHEAKAIGAVNTILIK--DGKSYGYNTDYYGFGKMLERA------- 112
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ G F + GAGGA R+ L + S+ ++V+ D E+A D
Sbjct: 113 ------KVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINF 166
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ E L N TP GM+PN + V VSE+ ++ +++ D VY P +T+ LK
Sbjct: 167 MSYGELEEINEE--FALINTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKM 224
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+ G V G+ M + Q + ++ G + K +I
Sbjct: 225 AKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDI 263
>gi|160934875|ref|ZP_02082261.1| hypothetical protein CLOLEP_03750 [Clostridium leptum DSM 753]
gi|156866328|gb|EDO59700.1| shikimate dehydrogenase [Clostridium leptum DSM 753]
Length = 281
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 141/282 (50%), Gaps = 42/282 (14%)
Query: 239 KVFGLISKPVGHSKGPILHNPTF--RHVNYN-GIY-VPMFVDDLKKFFSTYSSPDFAGFS 294
K + +I P+GH+ P +H F R ++ + G+Y +P +DL S D GF+
Sbjct: 4 KRYAVIGHPIGHTMSPFIHKRLFEMRDIDADYGVYDIP--TEDLIGKIQELKSLD--GFN 59
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
+ P+K+A++ F ++ A +VNT+ ++G L GY TD + ++A+ A
Sbjct: 60 ITIPHKQAIIPFLKQMDQKASLYQSVNTV---KNNGCLEGYTTDPDGFLSALGQA----- 111
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL--ASDVM 412
G PL GR+ +L G GG R +A+ A G V++ R KSL A+ +
Sbjct: 112 --------GIPLKGRVVIL-GTGGVARTIAYEATMAGCFVMLA----VRRKSLSHAASLS 158
Query: 413 GAARPFEDILNFQPEKGAI---------LANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
GA R D+ N E + L NATP+GM+P D +PV E L + + VFDA
Sbjct: 159 GALR--NDVHNGDTETCRLDCLSGHIDLLINATPVGMYPQIDEMPVGREILENTEYVFDA 216
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
VY P +T+LLK A G ++ G+ M + QA ++ G +
Sbjct: 217 VYNPMETKLLKTARECGCKVLGGLSMLVWQAAASHKIWDGSQ 258
>gi|428203364|ref|YP_007081953.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
gi|427980796|gb|AFY78396.1| shikimate 5-dehydrogenase [Pleurocapsa sp. PCC 7327]
Length = 288
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 27/291 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I TK+ G+I PV HS P++HN H+ N +YVP V DL+K + + +
Sbjct: 4 ITGKTKLLGVIGDPVEHSLSPVMHNAAIAHLRVNYVYVPFPVKGKDLEKAIAGFEAIGVV 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ EV AQ + AVNT+ R ++ G NTD E + +++
Sbjct: 64 GFNITIPHKQAIIPLLSEVSAAAQLVGAVNTVWR--TEAGWCGTNTDVEGFLAPLKEL-- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
+R + T ++ G GGA RA+ G G ++ + D + +
Sbjct: 120 DRDWTQVTP-----------IILGNGGAARAVVVGCAEIGCPKIRVVGRDRTKLEKFKQS 168
Query: 411 VMGAARPFEDILNFQPE------KGAILANATPLGMHPNTDRVPVSE---ETLRDYQLVF 461
+A E ++ E +L N TP+GM+P + PV E + + +
Sbjct: 169 WQNSALKTEIEVHEWSELAELVSDTKLLVNTTPVGMYPKVNESPVDAVVMEKMPTDAIAY 228
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
D +YTP T+ L A+ GA + G++M + Q ++ + P + MR
Sbjct: 229 DLIYTPNPTQFLVRAKERGAKAIDGLKMLVEQGASALKIWLQQPVPVDVMR 279
>gi|335040463|ref|ZP_08533591.1| Shikimate dehydrogenase [Caldalkalibacillus thermarum TA2.A1]
gi|334179652|gb|EGL82289.1| Shikimate dehydrogenase [Caldalkalibacillus thermarum TA2.A1]
Length = 302
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 15/291 (5%)
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGF 293
+ ++FGL + PVGHS P++HN F+ + Y P + + L + + + G
Sbjct: 4 SQKQLFGLFAHPVGHSLSPVMHNRAFQALGLPFYYHPFDIPPERLPEAVAGLKALGIRGI 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI--EDAIK 351
+V P+KE ++ DE+ P A+AI AVNT++ + G+L+GYNTD + ++ E I
Sbjct: 64 NVTIPHKENIVPLLDELDPEAEAIGAVNTVVLSET-GRLVGYNTDGAGYVQSLLSETGIN 122
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ G L G A +A + + + +R + + D
Sbjct: 123 LKETNVLLLGAGGAAKAIAVYLIKHGCASLTIANRTEHKAETLAH---HVQRYAAQSHDG 179
Query: 412 MGAARPFE-DILNF-QPEKGAILA-----NATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
G++ P ++ ++ Q ++ + A N TP+GM PN +VP+ + L +V D V
Sbjct: 180 KGSSSPVRINVHSWSQLDRDGVKAYQLIINTTPVGMWPNVGQVPLELKELSPGTIVSDIV 239
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
Y P +T LK AE GA + G+ MF+ Q F LFTG EAP E MR++V
Sbjct: 240 YNPLQTAFLKAAEQRGAQVHQGLGMFIFQGALAFKLFTGYEAPLEVMRKVV 290
>gi|268609155|ref|ZP_06142882.1| shikimate 5-dehydrogenase [Ruminococcus flavefaciens FD-1]
Length = 277
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 25/283 (8%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
F L P+GHS P++H F + Y + ++ K S G +V P+K
Sbjct: 4 FALTGHPLGHSMSPLIHEKLFALSGRDAEYELIDIEPEKLAQSRELFLSLGGMNVTIPHK 63
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
+AV+ DE+ A +VN I + +G+LIGYNTDC+ + + E
Sbjct: 64 QAVIPLMDELAESALRYNSVNCI--KNDNGRLIGYNTDCDGFLRSAE------------- 108
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI--DFERAKSLASDVM----GA 414
G P+ G+ +L G GG GR +A G + + I DF+ A+ L ++++ GA
Sbjct: 109 --GLPIGGKAAIL-GCGGVGRMIAIEVARHGGDITLAVIPQDFKNAQILMAEILEKCSGA 165
Query: 415 ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
+ +I + K IL NATP+GM P D VS++ + D VFD +Y P +T L+K
Sbjct: 166 SVRIVNISELEG-KFDILINATPVGMFPKVDACAVSDKVIEDCGSVFDVIYNPIETLLMK 224
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
A A G V G M + QA+ ++ G E + I+ A
Sbjct: 225 KARAMGKTAVGGAAMLVYQAVKAHEIWYGGTFTNEDIAPIIKA 267
>gi|311067270|ref|YP_003972193.1| shikimate dehydrogenase [Bacillus atrophaeus 1942]
gi|419823494|ref|ZP_14347040.1| putative shikimate dehydrogenase [Bacillus atrophaeus C89]
gi|310867787|gb|ADP31262.1| putative shikimate dehydrogenase [Bacillus atrophaeus 1942]
gi|388472397|gb|EIM09174.1| putative shikimate dehydrogenase [Bacillus atrophaeus C89]
Length = 294
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 35/305 (11%)
Query: 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTY 285
T + IN T++ GL++ P+GHS P +HN F+ + N Y+ V + L+ +
Sbjct: 2 TKDLGRINGKTQLIGLLATPIGHSLSPTMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGM 61
Query: 286 SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITA 345
+ GF+V P K ++ + D++ A+ AVNT++ +G L G++TD
Sbjct: 62 RALGVRGFNVSMPNKMKIIPYLDQLADSAKFSGAVNTVVN--DNGTLTGHSTDG------ 113
Query: 346 IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDF 401
GY G +AG+ L G+GGA +A + G A + IF D F
Sbjct: 114 -------MGYVRNLKEHGVDIAGKKMTLIGSGGAATPIAIQSALEGLAEISIFARNDAFF 166
Query: 402 ERAKSLA---------SDVMGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVS 450
E+A S+ P ED + E + ILAN T +GM P + + V
Sbjct: 167 EKAVENVRIINEDMKDSNCKANVYPLEDQETLRAEIASSDILANGTGVGMKP-FEGLSVI 225
Query: 451 EET--LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPK 508
E+ LR +V D VY P K++LL+ AE AG ++G+ M + Q F L+TGKE P
Sbjct: 226 EDVSMLRPDLIVSDVVYNPVKSKLLEQAEEAGCKTINGLGMMVWQGAMAFELWTGKEMPV 285
Query: 509 EFMRE 513
++ E
Sbjct: 286 AYINE 290
>gi|154685261|ref|YP_001420422.1| shikimate dehydrogenase [Bacillus amyloliquefaciens FZB42]
gi|154351112|gb|ABS73191.1| putative Shikimate dehydrogenase [Bacillus amyloliquefaciens FZB42]
Length = 303
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 76 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 407 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|291531999|emb|CBK97584.1| Shikimate 5-dehydrogenase [Eubacterium siraeum 70/3]
Length = 300
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 140/294 (47%), Gaps = 32/294 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSP 288
++ + VFG++ P+GH+ P +H F Y + P + L F + S
Sbjct: 19 NMTENKNVFGILGHPLGHTLSPQIHTRLFEISGEQAEYKILDTP--PEKLTDSFEYFKS- 75
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF++ PYK ++K CD + A+ +VN I +G GYNTDC
Sbjct: 76 -LTGFNITIPYKIDIIKMCDTLDDTAKRYNSVNCIAN--VNGVSTGYNTDCT-------- 124
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF--DIDFERAKS 406
G+ + G L ++ +L G GG GR +A A G + I D D AK+
Sbjct: 125 -----GFTKAIGAMGMTLTNKVLLL-GCGGVGRMMAIEAVREGGELTIAVRDADIPVAKA 178
Query: 407 LASDV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--VF 461
L ++ +A+ +L+ ++ NATP+GM+PNTD P++EETL L F
Sbjct: 179 LCEEIKQNYNSAKVGFCLLSEVKGDFDLMVNATPVGMYPNTDASPLTEETLGRITLNGFF 238
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
DA+Y PR+T+L+K G VS G++M + QA +++G E E ++ I
Sbjct: 239 DAIYNPRETKLMKMVSDKGVKKVSGGMQMLVWQAAVAHTIWSGAEYTAEQVQAI 292
>gi|261200843|ref|XP_002626822.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
gi|327507650|sp|C5JKE6.1|ARO1_AJEDS RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|239593894|gb|EEQ76475.1| 3-dehydroquinate synthase [Ajellomyces dermatitidis SLH14081]
Length = 1597
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 220/518 (42%), Gaps = 72/518 (13%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDSEIPSVDYVAEQISVLRSRTSVPLVFTIRTKAQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAIRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIIASHHDPKGELSWANGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV + + A + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSLDDNASLKKFKTWAEEKHDVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + +K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKSKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
HN FR + Y + +D +KKF SPDF G S+ P K +M DE+ P
Sbjct: 1310 HNALFRQMGLPHTYGTLETEDPEIVKKFIR---SPDFGGASITIPLKLDIMPLLDEIAPE 1366
Query: 314 AQAIAAVNTIIRRP-------SDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
A +I AVNTI+ P +LIG NTD + + + DA G +P
Sbjct: 1367 AVSIGAVNTIVCAPPAPDDQSQAPRLIGRNTDWQGMVRCLSDA--------GAYPAATPT 1418
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVM--GAARPFEDILN 423
++ G GG RA F +S G + + + ++ S+ S R ED+
Sbjct: 1419 TTSAGLVIGGGGTARAAIFALQSMGYSPIYVVGRSPDKLSSMTSTFAPDHDIRILEDVKA 1478
Query: 424 F-----------------QPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVFDAV 464
+P +L L N+D +E+ + +++ +
Sbjct: 1479 LESLPTVAIGTIPGDKPIEPHMREVLCELFDLCEKANSD----AEQARGISTKRILLEMA 1534
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
Y P T L++ A +G ++ G+E + Q + Q +T
Sbjct: 1535 YKPSVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWT 1572
>gi|434394200|ref|YP_007129147.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
gi|428266041|gb|AFZ31987.1| shikimate dehydrogenase [Gloeocapsa sp. PCC 7428]
Length = 287
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 29/292 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I TK+ G++ PV HS P +HN H+ + +Y+P+ V + L F+ ++ +
Sbjct: 2 ITGKTKLLGVMGYPVEHSMSPAMHNAAIAHLKLDYVYLPLSVKPEALTTAFAGLAAINCT 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+A++ E+ P+AQA+ AVNT+ R+ +G NTD + ++D
Sbjct: 62 GFNVTIPHKQAILPLLSEISPVAQAVGAVNTVWRQ--GDAWVGTNTDIVGFLAPLQDM-- 117
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASD 410
+ S +A ++ G GGA RA+ G + + + ++ + ++
Sbjct: 118 -------NCDWNSAVA----LILGYGGAARAVVAACAQLGCPTIHVIGRNLQKLQQFSAS 166
Query: 411 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET---LRDYQLV 460
A ++ + P+ +L N TP+GMHP+ + P+S L +
Sbjct: 167 WHDADITDKLQVHVWDKLPQLIPQ-ATLLVNTTPVGMHPHAEASPLSVAEMMLLPPNAIA 225
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+D +YTP T+ L+ AE GAI + G EM ++Q ++ + P E MR
Sbjct: 226 YDLIYTPSPTQFLQQAEKQGAIAIDGREMLVQQGAAALKIWLQQPVPVEVMR 277
>gi|421732532|ref|ZP_16171653.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407073661|gb|EKE46653.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 294
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 67 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 407 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|310643105|ref|YP_003947863.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|309248055|gb|ADO57622.1| Shikimate 5-dehydrogenase [Paenibacillus polymyxa SC2]
gi|392303905|emb|CCI70268.1| shikimate 5-dehydrogenase [Paenibacillus polymyxa M1]
Length = 289
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 28/294 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I D + G++ P+ HSK P++H + +G +VP+ V D L+ + F
Sbjct: 9 IERDLVLLGVLGDPIKHSKSPLMHKIALQAAGVDGDFVPLHVTPDQLEDAVKGIRALHFR 68
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K +MK+ DE+ A+ I AVNTI+ +G+L GYNTD +
Sbjct: 69 GVNVTIPHKVEIMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYV-------- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASD 410
R K T+ L G + GAGGA R + + + V+I + ++A+ LA +
Sbjct: 119 -RSLKEETSV---ELKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALE 174
Query: 411 VMGAARPFEDILNFQPEKGA-------ILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
A P ++ + E+ +L N T +GM P +D +PV + + +V D
Sbjct: 175 WTTEAIP---VMGYSNEEARNVLTTVDVLINTTSVGMSPLSDELPVETSLIPEGIIVSDL 231
Query: 464 VYTPRKTRLLKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+Y P +TRLL+++ E G + G+ MF+ Q F FTG + MR VL
Sbjct: 232 IYNPLETRLLRESREQRGCTVHGGLGMFVYQGAVAFEYFTGVAPAVDQMRAAVL 285
>gi|451342998|ref|ZP_21912077.1| shikimate 5-dehydrogenase [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449338366|gb|EMD17515.1| shikimate 5-dehydrogenase [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 283
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 138/294 (46%), Gaps = 27/294 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGF 293
I T++ G+I+ P+ HS P++HN F ++N + +Y+ + LK+ + G+
Sbjct: 3 ITGYTQLIGIIADPIRHSLSPMMHNACFEYLNLDYVYLAFETEALKETIEGLKAIKARGW 62
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
+V PYK+ ++ + DE+ ++Q +VNT+I G L G +TD
Sbjct: 63 NVSMPYKKRIIPYLDEISLVSQLSDSVNTVIN--DQGYLKGTSTD-------------GL 107
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDF-------ERAK 405
G+K G + + VL GAGGA A +A GA + +F ER +
Sbjct: 108 GWKYGLKEKNISIQDKTLVLLGAGGAATAIMAQGAIDGLKEIYVFKRKNQTWSQIQERIE 167
Query: 406 SLAS----DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
+ S ++ +++L + IL NAT +GM P+ + E L VF
Sbjct: 168 HMMSHTNTQIILCDIEDKELLKEKISDADILTNATDIGMSPHDKECLIDREWLHKDLTVF 227
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
D +Y P +T LL+ A+ G + +SG+ M L Q F L+T ++ P + R+ +
Sbjct: 228 DCIYHPLETLLLQYAKEKGCMCISGLSMLLYQGAVSFELWTNRKMPIDIARKAI 281
>gi|15606233|ref|NP_213611.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
gi|9087118|sp|O67049.1|AROE_AQUAE RecName: Full=Shikimate dehydrogenase
gi|2983425|gb|AAC07007.1| shikimate 5-dehydrogenase [Aquifex aeolicus VF5]
Length = 269
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 141/280 (50%), Gaps = 31/280 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA T+++G+I PV HS P+ N R+ N +Y+ + ++LKK F + +
Sbjct: 2 INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KE ++ D V A+ I AVNT+ + +GK GYNTD + +++ I
Sbjct: 62 GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLKSLIP 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
E + + ++ GAGGA RA+ + GA+V +++ E+A LA
Sbjct: 120 E-------------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 166
Query: 412 MGAARPFEDILNFQPE----KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTP 467
P E ++N PE K ++ N T +G+ + D + + ++ +V D +Y
Sbjct: 167 -----PLE-VVN-SPEEVIDKVQVIVNTTSVGLK-DKDPEIFNYDLIKKDHVVVDIIY-- 216
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
++T+LLK A+ GA + G+ M L Q I F ++ G E P
Sbjct: 217 KETKLLKKAKEKGAKLFDGLPMLLWQGIEAFKIWNGCEVP 256
>gi|394992367|ref|ZP_10385148.1| putative shikimate dehydrogenase [Bacillus sp. 916]
gi|429504288|ref|YP_007185472.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452854760|ref|YP_007496443.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|393806811|gb|EJD68149.1| putative shikimate dehydrogenase [Bacillus sp. 916]
gi|429485878|gb|AFZ89802.1| shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452079020|emb|CCP20773.1| Shikimate dehydrogenase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 294
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G+LIG++TD
Sbjct: 67 RGFNVSMPNKMNILPYLDELADSAKFTGAVNTVVNE--NGRLIGHSTDG----------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 407 ----LASDVMGA---ARPF----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G+ A+ F +D L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKAKVFPLEDQDALRAEIASSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+AAG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQAAGCNTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|417924193|ref|ZP_12567645.1| shikimate dehydrogenase [Streptococcus mitis SK569]
gi|342836247|gb|EGU70463.1| shikimate dehydrogenase [Streptococcus mitis SK569]
Length = 284
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV + V DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEVSDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF + G L GAGGA +++ A G V + + E+ + +
Sbjct: 112 FKSLPSF--TITGEKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVP---VSEETLRDYQLVF 461
ED+ Q + +L NAT +GM + VP V ETL LV
Sbjct: 170 EKTGFKVDLYALEDVPELQARIAESDLLVNATSVGMDGQSSPVPENIVLPETL----LVA 225
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A + G +V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 226 DIIYKPFETPFLKWARSQGNPVVNGLGMLLYQAAAAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|443318685|ref|ZP_21047931.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 6406]
gi|442781693|gb|ELR91787.1| shikimate 5-dehydrogenase [Leptolyngbya sp. PCC 6406]
Length = 308
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 16/293 (5%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I T+V G+I P+ HS P + N R + ++GIYVP V + + +
Sbjct: 10 ITGKTQVLGIIGDPIAHSLSPPMQNAALRALGWDGIYVPFPVRAAAVDTALAGLWALGVV 69
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+AVM EV PLAQA+ AVNT+ R+ + G NTD + ++D
Sbjct: 70 GFNVTIPHKQAVMAALAEVTPLAQAVGAVNTVWRQ--EQGWAGTNTDVLGFVAPLQDWGH 127
Query: 352 ERGYKNGTASFGSPLAG-RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASD 410
E + + P + R +L G A A+A ++ + + D + +S A
Sbjct: 128 EALVPESSLAGHLPWSQRRAVILGNGGAARAAVAGCSQLHCGEIWVVGRDRNKLQSFAES 187
Query: 411 VMGA-------ARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY---QLV 460
+ ++ + PE +L N TPLGMHP D+ PVS + L +
Sbjct: 188 WQDSPLCPTLQVASWDQLPALLPET-TLLVNTTPLGMHPREDQSPVSPQDLAQLPSDAIA 246
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+D +YTP T+ L+ A G + GVEM ++Q ++ + P MR
Sbjct: 247 YDLIYTPSPTQFLRWATERGLHTIDGVEMLVQQGAAALEIWIHQPPPIAVMRH 299
>gi|167750656|ref|ZP_02422783.1| hypothetical protein EUBSIR_01633 [Eubacterium siraeum DSM 15702]
gi|167656335|gb|EDS00465.1| putative shikimate dehydrogenase [Eubacterium siraeum DSM 15702]
Length = 281
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 139/293 (47%), Gaps = 32/293 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSPD 289
+ + VFG++ P+GH+ P +H F Y + P + L F + S
Sbjct: 1 MTENKNVFGILGHPLGHTLSPQIHTRLFEISGEQAEYKILDTP--PEKLTDSFEYFKS-- 56
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF++ PYK ++K CD + A+ +VN I +G GYNTDC
Sbjct: 57 LTGFNITIPYKIDIIKMCDTLDDTAKRYNSVNCIAN--VNGVSTGYNTDC---------- 104
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF--DIDFERAKSL 407
G+ + G L ++ +L G GG GR +A A G + I D D AK+L
Sbjct: 105 ---TGFTKAVGAMGMTLTNKVLLL-GCGGVGRMMAIEAVREGGELTIAVRDADIPVAKAL 160
Query: 408 ASDV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--VFD 462
++ +A+ +L+ ++ NATP+GM+PNTD P++EE L L FD
Sbjct: 161 CEEIKQNYNSAKVEFCLLSEVKGDFDLMVNATPVGMYPNTDASPLTEEALGRITLNGFFD 220
Query: 463 AVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
A+Y PR+T+L+K A G VS G++M + QA +++G E E ++ I
Sbjct: 221 AIYNPRETKLMKMASDKGVKKVSGGMQMLVWQAAVAHTIWSGAEYTAEQVQAI 273
>gi|452852866|ref|YP_007494550.1| Shikimate dehydrogenase [Desulfovibrio piezophilus]
gi|451896520|emb|CCH49399.1| Shikimate dehydrogenase [Desulfovibrio piezophilus]
Length = 272
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 132/285 (46%), Gaps = 22/285 (7%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSV 295
+ ++G+I P+GH+ P LHN FR + Y P+ D + F F G SV
Sbjct: 2 SGLYGIIGWPLGHTMSPTLHNWGFRQSGADAAYAAYPLEPDQIPDFMRRVRDEPFLGLSV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K VM+F D + A + AVNT+ +GKL G NTD I +
Sbjct: 62 TIPHKRTVMEFLDHMTDRAVRVGAVNTLYW--DEGKLCGENTDVLGLIAPLRHM------ 113
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
PL +L G A A+ + A + I + E+A++LA + A
Sbjct: 114 --------QPLPASAMILGAGGAARAAVVGFKELGIADIAIANRTGEKAEALAEEFSIRA 165
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRV-PVSEETLRDYQLVFDAVYTPRKTRLLK 474
+E + +P A++ N TPLGM + P + V+D VY P +TRLL+
Sbjct: 166 VAWESRMEEEP---ALICNTTPLGMSGTMETFSPWDAKRFPAGCTVYDIVYNPLETRLLR 222
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+A A G VSG+EMFL Q + QF L+TGK+ + R ++L
Sbjct: 223 EAAAVGCGTVSGLEMFLHQGLAQFRLWTGKDMDEAGARALLLCAL 267
>gi|389856373|ref|YP_006358616.1| shikimate 5-dehydrogenase [Streptococcus suis ST1]
gi|353740091|gb|AER21098.1| shikimate 5-dehydrogenase [Streptococcus suis ST1]
Length = 289
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 406
K RG++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 407 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 457
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIAQATGVPMQVLALDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
LV D +Y P +T L+K A++ G ++G+ M L QA F +TG+E P + + + ++
Sbjct: 225 LLVADVIYQPFETPLMKHAQSQGNPTINGLGMLLFQAAEAFQAWTGQEMPTDLIWDQLVQ 284
Query: 518 KF 519
K+
Sbjct: 285 KY 286
>gi|335031420|ref|ZP_08524859.1| putative shikimate dehydrogenase [Streptococcus anginosus SK52 =
DSM 20563]
gi|333769670|gb|EGL46768.1| putative shikimate dehydrogenase [Streptococcus anginosus SK52 =
DSM 20563]
Length = 261
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 133/274 (48%), Gaps = 31/274 (11%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQTGVNGVYVAWEISQDDLKATVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DEV P AQ I A+NT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDEVTPAAQMIGALNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ V+ GAGGA A+ A GA + +F FER
Sbjct: 109 -KGFFMSLPSF--VITGKKLVMLGAGGAATAIIVQAVLDGAEEIFVFTRHSSFERVSQKM 165
Query: 409 SDVM--GAAR----PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
++ AA+ P E ++L + A+L N T LGM +P S + LV
Sbjct: 166 KEIQQKTAAKIWVLPLENQELLQEKINVSALLVNGTSLGMDGKALPIPSSIRLPHSF-LV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
D +Y P +T LK A+ +V+G+ M L QA
Sbjct: 225 ADVIYQPFETPFLKWAKGQDVEVVNGLGMLLYQA 258
>gi|384048441|ref|YP_005496458.1| shikimate dehydrogenase [Bacillus megaterium WSH-002]
gi|345446132|gb|AEN91149.1| Putative Shikimate dehydrogenase [Bacillus megaterium WSH-002]
Length = 298
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 137/301 (45%), Gaps = 33/301 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
V IN T++ GL++ P+GHS P +HN F+ + N Y+ V D L+ +
Sbjct: 4 VGRINGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRAL 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ GF+V P K ++ F DE+ A+ AVNT++ +G L+G++TD
Sbjct: 64 NVKGFNVSMPNKTKILPFLDELADSAKFSGAVNTVVN--DNGVLVGHSTDG--------- 112
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---------- 397
GY G + G+ L G+GGA +A A G + IF
Sbjct: 113 ----MGYIRNLKENGVDITGKKMTLVGSGGAATPIAIQAALEGLEELTIFARHDEFYSKA 168
Query: 398 ----DIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-E 452
I E K ++ + D L + IL N T +GM P + + +
Sbjct: 169 VENVKIINEEMKHVSCKAKLYSLEDTDRLREEIRTSDILTNGTGVGMKPLEEFSIIEDIS 228
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
LR +V D VY P K++LL+ AE+ G V+G+ M + Q F L+TGKE P E+++
Sbjct: 229 MLRPDLIVTDVVYMPMKSKLLEQAESIGCHTVNGIGMMIWQGAMAFELWTGKEMPVEYIK 288
Query: 513 E 513
E
Sbjct: 289 E 289
>gi|403379143|ref|ZP_10921200.1| shikimate 5-dehydrogenase [Paenibacillus sp. JC66]
Length = 292
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 140/293 (47%), Gaps = 22/293 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T ++G+ P+ HSK P++ N F N Y + L+ + + F
Sbjct: 10 IDTATVMYGVFGDPIAHSKSPLMLNRAFAEKGLNAAYAAFHIKPGTLRDAVNGIRALGFR 69
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VM + D V A AI AVNTI+ R DGKL GYNTD + ++++
Sbjct: 70 GVNVTIPHKLEVMDYLDHVDEHALAIGAVNTIVNR--DGKLTGYNTDGIGYVRSLKE--- 124
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF-----DIDFERAKS 406
A F G+ VL GAGGA + + + G + +I D ++ AK
Sbjct: 125 -------EAHFAP--KGKTVVLVGAGGAAKGIGYALIQEGVKKLIIANRTPDKAYDLAKD 175
Query: 407 LASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
L + P +I ++ E ++ + T +GMHP+ +P S + + + LV D VY
Sbjct: 176 LQAWTETEGIPLTEIGSYL-EDSELVVHTTRVGMHPHIHDIPFSPQHIHNQLLVSDIVYN 234
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P TRLL +A GA G+ MF+ Q F +TG AP E MRE V A F
Sbjct: 235 PLDTRLLSEARLRGAKTHGGLGMFVYQGAYAFEYWTGLAAPVEAMREAVEASF 287
>gi|420158311|ref|ZP_14665132.1| putative shikimate dehydrogenase [Clostridium sp. MSTE9]
gi|394754991|gb|EJF38277.1| putative shikimate dehydrogenase [Clostridium sp. MSTE9]
Length = 303
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 144/286 (50%), Gaps = 20/286 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I+ +TK+ LI P+ S + N ++ N +Y D L + +FA
Sbjct: 3 IDINTKMVTLIGTPLKQSFAAQMQNTGYQAAGLNMVYFYTEADKDHLGDIVNGLRYMNFA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K V+++ DE+ PL Q + A NT+++ P DGKL+GYNTD T++
Sbjct: 63 GFAVTKPNKVRVLRYLDELDPLCQKMGASNTVVKTP-DGKLVGYNTDGIGFYTSL----- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASD 410
T G + +F G GGAGRA+ GAR + I D+ AK+L +D
Sbjct: 117 -------TQEGGIKVDQCVFFCFGGGGAGRAMCSVLAYHGARKIYITDVFEPCAKALVAD 169
Query: 411 VMGAARPFEDILNF----QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ P + ++ + ++ NA+ +GM + R P+ +E ++ Q FDA Y
Sbjct: 170 INANFAPVAEFVHHGDFSKLSACDVVMNASGVGMGDSIGRSPLPKEYIQPSQFYFDACYN 229
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
P KT+ L DAE G +++G+ M L Q + Q L++G++AP E MR
Sbjct: 230 PEKTQFLLDAEEKGCRVLNGLGMSLYQGVAQIELWSGQKAPVEAMR 275
>gi|346309564|ref|ZP_08851648.1| shikimate 5-dehydrogenase [Dorea formicigenerans 4_6_53AFAA]
gi|345898693|gb|EGX68558.1| shikimate 5-dehydrogenase [Dorea formicigenerans 4_6_53AFAA]
Length = 291
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 52/305 (17%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I+ T + LI PVGHS P +HN +F + + Y+ + D + +F
Sbjct: 3 KRISGTTTLLALIGSPVGHSSSPAMHNYSFEKLGLDYAYMAFEIKEDQVGEFLDAARLLK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K V + DE+ P AQ + A NT++ +GKLIG+NTD
Sbjct: 63 IRGFNVTMPCKMEVARQVDELSPAAQIMGASNTVVNE--NGKLIGHNTDG---------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD---IDFERAK 405
G+ A G + + L G GGAG A+ GA + +F+ +FE+ +
Sbjct: 111 ---VGFVKNLAEHGVSVKDKTITLMGGGGAGTAIFVQLALDGASEIRVFNRKGANFEKLE 167
Query: 406 SLASDVMGAARPFEDILNFQPE-------------------KGAILANATPLGMHPNTDR 446
+A + IL F PE + IL NAT +GM PN
Sbjct: 168 KIA----------KKILEFAPECKIQVCDMADKKALYKSIGESDILVNATNVGMKPNEKG 217
Query: 447 VPVSEETL-RDYQLVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGK 504
+ + ++ R+ +V + +Y P++TR++++A+ AG ++ G M L Q F+LFTG+
Sbjct: 218 TMIQDTSVYREDLVVAEIIYNPKETRMMREAKEAGVKCVIGGKGMLLWQGAEAFHLFTGQ 277
Query: 505 EAPKE 509
E P E
Sbjct: 278 EMPVE 282
>gi|306824984|ref|ZP_07458327.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432811|gb|EFM35784.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 284
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 37/298 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSL----- 407
SF ++ + + GAGGA +++ A G V + + E+ +
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLTKLQ 169
Query: 408 -ASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVS---EETLRDYQLVF 461
+D EDI Q + K +L NAT +GM + VP S ETL LV
Sbjct: 170 EQTDFKVGLYALEDISELQEKIAKSDLLVNATSVGMDGQSSPVPESINLPETL----LVA 225
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 226 DIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSLTEKY 283
>gi|408382533|ref|ZP_11180077.1| shikimate dehydrogenase [Methanobacterium formicicum DSM 3637]
gi|407814888|gb|EKF85511.1| shikimate dehydrogenase [Methanobacterium formicicum DSM 3637]
Length = 283
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 133/295 (45%), Gaps = 29/295 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I T + G++ PV HS P +HN F + + +YVP V +L +
Sbjct: 2 ITGKTGLVGIMGDPVEHSLSPPMHNAAFHQLKLDYVYVPFHVKRGNLASAIEGARTMGIK 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ P+K V+ + DE+ A+ I AVNT+ + ++ K +GYNTD ++ AIE+
Sbjct: 62 GLNLTIPHKIEVINYLDELDEAAELIGAVNTV--KFTENKAVGYNTDGFGAVKAIEETTS 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ K G F L SR V+I + E+A +L D+
Sbjct: 120 VQDKKIIIIGAGGAARAISFQLL-------------LSRVGEVLIANRTREKACNLRDDL 166
Query: 412 MG------AARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-DAV 464
+D L + E +L N TP+GMHP+ D PV + LV D V
Sbjct: 167 KERFNTSLGCLGLDDELGIELEDTDVLINTTPVGMHPHQDDKPVVTSDMMHSDLVVNDIV 226
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE-----FMREI 514
Y P +T LL++A GA V G +M + Q IG F ++TG P E MRE+
Sbjct: 227 YNPLETGLLREAGKVGATTVHGTKMLIYQGIGAFRIWTGINPPVEVFETALMREL 281
>gi|347548873|ref|YP_004855201.1| putative shikimate 5-dehydrogenase AroD [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346981944|emb|CBW85929.1| Putative shikimate 5-dehydrogenase (AroD) [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 273
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 243 LISKPVGHSKGPILHNPTFRHV----NYNGIYVP--MFVDDLKKFFSTYSSPDFAGFSVG 296
+I P+ HS P + N F+ + YN + + F ++KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMDAEYNSVLIEEDAFETEIKKLMVS----GIRGFNIT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ F DE+ PLA AVNT++R+ +GK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEPLAADSGAVNTVLRK--EGKWYGFNTDG-------------KGYL 106
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFERAKSLASD----- 410
G S ++ GAGGA +A+ K+ A++ I + E+A + +
Sbjct: 107 EGLEEIRSITENDSILITGAGGASKAIYLALKNHTNAKITIANRTSEKAVEMTKNHDNHY 166
Query: 411 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
M +++ NF I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEEAEKNLANF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+A+ GAII +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAIIQNGLSMFVNQGALAFEIWTGVKPKRSLMKEAVLEQL 270
>gi|300811894|ref|ZP_07092355.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497091|gb|EFK32152.1| shikimate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 310
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 37/301 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV-----PMFVDDLKKFFSTYSSP 288
++ T + GL + P+ HS P +HN + NG Y+ P + D K T
Sbjct: 25 LDGHTILLGLFADPIRHSVSPTMHNNAMAKLGLNGAYLCFEIGPDRIGDAVKALRTL--- 81
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+A++ + D++ P A+ AVNT++ G L GY TD + ++++
Sbjct: 82 DMRGVNVSMPNKQAIIPYLDKLDPAAEICGAVNTVVN--DHGFLTGYTTDGTGWLRSLQE 139
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV----IFDIDFERA 404
G + G++ LAGAGGA +A GA+ + I D ++E A
Sbjct: 140 D-------------GQDVKGQVVTLAGAGGAAIPIAVATAMGGAKEIRIFNIHDRNWEPA 186
Query: 405 K---SLASDVMGAA---RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LR 455
K + ++ G A P ED F+ + I +AT +GM P D V + L
Sbjct: 187 KDKVAAINEATGCACSLNPMEDKEAFKQSIAESGIYCDATGVGMPPLDDLSLVEAPSWLH 246
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+ +V D VY PR+T+L++ A+ AG I +G+ M + Q F L+TGKE P ++++EI
Sbjct: 247 EDMVVSDTVYEPRETKLMRIAKEAGVKHIYNGLGMVVGQGAESFKLWTGKEMPTDYIQEI 306
Query: 515 V 515
V
Sbjct: 307 V 307
>gi|325270150|ref|ZP_08136757.1| shikimate dehydrogenase [Prevotella multiformis DSM 16608]
gi|324987451|gb|EGC19427.1| shikimate dehydrogenase [Prevotella multiformis DSM 16608]
Length = 250
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 299
+GLI P+GHS N F + + N +Y+ + + F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFHNEHINAVYINFEIPSIDGFIEVIDSNPELCGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
KE VM + D + P A+AI AVN I + S L G+N+D +IE + ER +K
Sbjct: 64 KEQVMDYLDSLSPEAEAIGAVNVIRVTHKGSKTLLKGFNSDVIGFTRSIEPLL-ERHHKK 122
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
++ G GGA +A+ +G KS G +F +R L D + A
Sbjct: 123 A-------------LILGTGGASKAVNYGLKSLGLE-TMFVSRTKREGVLTYDEVTPALI 168
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKDA 476
E ++ N TPLGM+PN D P + E + + L++D +Y P +T +
Sbjct: 169 REY---------NVVVNCTPLGMYPNADVCPALPYEAMDSHTLLYDLLYNPDETLFMAKG 219
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
GA++ +G+EM L QA + + GKE
Sbjct: 220 RERGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|402074932|gb|EJT70403.1| pentafunctional AROM polypeptide [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1575
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 225/512 (43%), Gaps = 54/512 (10%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P K + ++ LP++ R GG Y D ++ L+
Sbjct: 1081 GSDAVELRVDLLEDHSPEFVTKQVALLRYVCNLPIVFTVRTASQGGRYPDDNYEGALTLY 1140
Query: 93 L-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQ 150
L A LG +YVD E+ + +++ K ++ G I++ + D + T S + ++ +
Sbjct: 1141 LLAIRLGVEYVDVEMTMPDDVIEK--TTQAKGKTSIIASHHDPKGTLSWRNGSWIPFYNK 1198
Query: 151 A-TGADIIKLV-FSVNDITEIA----RIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
A D++KLV +S D A + +H P+IA ++GE G +S++L+ F
Sbjct: 1199 ALRHGDVVKLVGWSRGDDDNFALAGFKARMSSAHKNTPLIALNMGEAGKLSRVLN-GFLA 1257
Query: 205 ALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHV 264
+ + L G + +R+ + + F L KP+ S+ P LHN F
Sbjct: 1258 PVTHSCLTAAAAPGQLSAAEIRRGLHLLG-KLPRRRFHLFGKPISKSRSPALHNTLFEQN 1316
Query: 265 NYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII 324
IY D + +PDF G SV P K V+ DEV A+ I AVNTII
Sbjct: 1317 GLPHIYSNFETDVASEMQELIRAPDFGGASVTIPLKLGVIPLLDEVSDSAKTIGAVNTII 1376
Query: 325 -RRPSDG--KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGR 381
+ DG +L+G NTD + + R P + R V+ GAGG R
Sbjct: 1377 PTQQPDGSVRLVGENTDWRGMALCLRSSGVVR-----------PPSPRPAVVLGAGGTAR 1425
Query: 382 ALAFGAKSRGARVVIFDIDFERAKSLAS-DVMGAARPFE-DI---------LNFQPEKGA 430
A F S G F + A+S A+ + M ++ P E DI L+ P + A
Sbjct: 1426 AAIFALHSLG-----FAPIYVVARSAANVETMASSFPSEYDIKHLCEPLTRLDQAPPQVA 1480
Query: 431 ILA----NATPLGMHPNTD--RVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIV 484
I AT GM TD + +S +++ + Y P T +++ AEA+G V
Sbjct: 1481 ISTIPADKATDPGM---TDVFKSVLSLAPAAGTRVLLEMAYFPPVTAMMELAEASGWATV 1537
Query: 485 SGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
G + Q QF L+TG E + IVL
Sbjct: 1538 PGATVLAAQGKYQFELWTGVAPLIEDCKSIVL 1569
>gi|339641659|ref|ZP_08663103.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339454928|gb|EGP67543.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 285
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 139/302 (46%), Gaps = 37/302 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
I+ T++ G+I+KP+ HS P +HN + N N +Y+ + VD DL K
Sbjct: 3 IDGHTRLAGVIAKPIKHSISPFIHNMAYHLTNTNAVYLALEVDSKDLGKAVENIKLYHML 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYK V++F DE+ A+ I AVNTII R G LIGYNTD ++ D
Sbjct: 63 GANVSMPYKSEVIQFLDELDESAREIGAVNTIINR--HGCLIGYNTDGVGFFKSLPDF-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLAS-- 409
L G+ + GAGG A+ A G + V F R+K+L+
Sbjct: 119 -------------NLKGKNLTILGAGGGASAIISQAVKEGVKRVFV---FSRSKNLSKTE 162
Query: 410 DVMGA----------ARPFEDI--LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY 457
D + + ED+ L+ + A+ NAT +GM+ + +P S +
Sbjct: 163 DRLTQLSKRLSHPIIVQAIEDLSALDTAVGQSALFVNATGVGMNGKSLPIPNSF-IFPKH 221
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
LV D Y P KT L+ A G V+G+ M L QA F L TGK P E ++ +L
Sbjct: 222 ILVADIAYNPMKTPFLQMASEQGLSTVNGLGMLLYQADRAFELMTGKAMPTEPIKNALLK 281
Query: 518 KF 519
F
Sbjct: 282 HF 283
>gi|309775585|ref|ZP_07670585.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916679|gb|EFP62419.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
Length = 290
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 148/303 (48%), Gaps = 30/303 (9%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I+ T++ GLI+ P+ HSK P +HN F + + Y+ V ++L+ + +
Sbjct: 3 ERISGHTELIGLIATPIRHSKSPKMHNEAFAKLGLDYAYLAFEVGNEELEDAVKGFKALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + ++ D + P A+ AVNT++ +G+L G+ TD + +++DA
Sbjct: 63 VRGYNVSMPNKTVIGQYLDHLSPAAELCGAVNTVVN--DNGELTGHITDGIGYMRSLKDA 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
G + G+ + GAGGA A+ G + + IF D +ERA+
Sbjct: 121 -------------GIDVVGKKVTIVGAGGAATAIEIQMALDGVKELSIFNRRDEFWERAE 167
Query: 406 SLASDV---MGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
++ D+ L + E + ANAT +GM P ++ + + + LR
Sbjct: 168 QNVKNINEKTSCKATLYDLADTAALKQEIEDSYLFANATGVGMKPLEGQMVIPDASFLRK 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY P +T LL+ A+ G ++G+ M L Q F L+TGKE P ++M+EI+
Sbjct: 228 ELIVTDVVYMPTETELLRVAKEVGCKTMNGLGMMLYQGAAAFELWTGKEMPIDYMKEILD 287
Query: 517 AKF 519
F
Sbjct: 288 IHF 290
>gi|422412979|ref|ZP_16489938.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
gi|313618856|gb|EFR90731.1| shikimate 5-dehydrogenase [Listeria innocua FSL S4-378]
Length = 273
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD------LKKFFSTYSSPDFAGFSVG 296
+I P+ HS P + N F+ + N Y + +++ +KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEVEIKKLMDS----GVRGFNIT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ F DE+ LA A AVNT++R+ DGK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDG-------------KGYL 106
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFERAKSLASD----- 410
G S ++ GAGGA +A+ KS A++ + + E+A + D
Sbjct: 107 EGLEEIRSITKDDSILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHH 166
Query: 411 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
M + +++ +F I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEQAEKELADF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+A+ GAI +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQL 270
>gi|406592611|ref|YP_006739791.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|406594387|ref|YP_006741890.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|410858665|ref|YP_006974605.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
gi|405782819|gb|AFS21567.1| shikimate 5-dehydrogenase [Chlamydia psittaci MN]
gi|405788483|gb|AFS27226.1| shikimate 5-dehydrogenase [Chlamydia psittaci CP3]
gi|410811560|emb|CCO02213.1| shikimate 5-dehydrogenase [Chlamydia psittaci 01DC12]
Length = 477
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 218/499 (43%), Gaps = 55/499 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKQHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
L + + G+GG+ +A+A GA++ IF+ A+ L+ G A P L
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFNRTKTHAEKLSVLCHGQAFP----L 382
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
N E I + L + P+ + + ++ D P+++ K A+ G
Sbjct: 383 NALSENHNI--DILILCLPPDVEIPEIYPP------VIIDINTLPKESLYTKKAKERGCQ 434
Query: 483 IVSGVEMFLRQAIGQFNLF 501
I+ G EMF QA+ QF+L+
Sbjct: 435 ILYGYEMFAEQALLQFSLW 453
>gi|327507646|sp|C0NL63.1|ARO1_AJECG RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|225560322|gb|EEH08604.1| pentafunctional AROM polypeptide [Ajellomyces capsulatus G186AR]
Length = 1595
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 221/529 (41%), Gaps = 66/529 (12%)
Query: 36 GADVVEIRLDCINNFQ-----PGKD-----LEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + Q P D + ++ ++ +P++ R K GG + D +
Sbjct: 1076 GSDAVELRVDLLKDPQSDNEIPSVDYVAEQISVLRSRTSVPLVFTIRTKGQGGRFPDDAY 1135
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
L+ LA +G+++VD E+ +L + + G I++ + D + G
Sbjct: 1136 DAALQLYRLAVRMGSEFVDLEISFPEQLL--RTVTEMKGFSKIITSHHDPKGQLSWVNGS 1193
Query: 145 LVS--RMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQLL 198
+ D+IKLV I + + + + + VPIIA ++G++G +S++L
Sbjct: 1194 WIQFYNKALQYGDVIKLVGVARSIDDNISLKKFKTWAEEKHNVPIIAINMGDKGQLSRML 1253
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKPVGHSKGPIL 256
NG + S P P S R+ K + + K F +I PV S+ P +
Sbjct: 1254 ----NGFMTPVSHPSLPFKAAPGQLSAREIRKGLSLIGEIKAKKFAVIGNPVSASRSPAM 1309
Query: 257 HNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316
HN FR + Y + D+ + SP F G SV P K ++M DE+ P A +
Sbjct: 1310 HNTLFRQMGLPHTYGTLETDNPEVAKEFIRSPGFGGASVTIPLKISIMPLLDEIAPEAMS 1369
Query: 317 IAAVNTIIRRPS--DGK-----LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGR 369
I AVNTI+ P DGK LIG+NTD + + + DA TAS G
Sbjct: 1370 IGAVNTIVCAPPAPDGKSQTPRLIGHNTDWQGMVRCLSDAGAYAAATPTTASAG------ 1423
Query: 370 MFVLAGAGGAGRALAFGAKSRG---------------ARVVIFDID-----FERAKSLAS 409
++ G GG RA F ++ G + F D E K+L S
Sbjct: 1424 --LVIGGGGTARAAIFALQNMGYSPIYVLGRSPDKLSSMTSTFHTDHDIRILEDVKALES 1481
Query: 410 DVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET--LRDYQLVFDAVYTP 467
A +P IL L N+D +E+ + +++ + Y P
Sbjct: 1482 LPTVAIGTIPGDKPIEPHMREILCRLFDLCEKANSD----TEQARGVSTKRILLEMAYKP 1537
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
T L++ A +G ++ G+E + Q + Q +T E+ R V+
Sbjct: 1538 SVTSLMQLASDSGWTVLPGLEALVAQGVYQCEYWTNITPVYEYARNAVM 1586
>gi|399925231|ref|ZP_10782589.1| shikimate kinase [Peptoniphilus rhinitidis 1-13]
Length = 503
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 35/274 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+GLI + + HSK +H +FR NYN + LK FF +F G +V PYK
Sbjct: 93 YGLIGESLSHSKSKEIH-ESFRKYNYNLKNIEK--SKLKDFFK---KRNFTGINVTIPYK 146
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E +K+ D++ PLA+ I AVNTI+ R +GKLIGYNTD G+
Sbjct: 147 ETSLKYLDKIDPLAKEIGAVNTIVNR--NGKLIGYNTDY-------------LGFSYSIK 191
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
FG L + ++ G+GGA +++V ++ AK++ + +E+
Sbjct: 192 HFGISLKNKKVLILGSGGA------------SKMVQKFVEDNLAKNVTVISRSSKNNYEN 239
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ F+ ++ NATP+GM+P+ + + + V D +Y P T+L+ DA+ G
Sbjct: 240 LNKFKD--YNVIINATPVGMYPDNLECKLDLNIFKSLESVVDLIYNPLNTKLILDAKKLG 297
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+SG+ M + QA +F ++ + + E+
Sbjct: 298 LKTMSGLLMLVAQAFYAAEIFLNEKLDENLIEEM 331
>gi|403668288|ref|ZP_10933563.1| shikimate dehydrogenase [Kurthia sp. JC8E]
Length = 279
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 19/269 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K + +I P+ HS P +HN + Y+P+ V + L+ F +GF+V
Sbjct: 5 KWYAVIGDPIEHSMSPFMHNLWMTSEGRDATYIPLHVSRESLRASFEGMKVLGCSGFNVT 64
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ DEV LA+ + AVNT++R+ +DGK GYNTD + ++ED +
Sbjct: 65 IPHKEAIIPLLDEVDALAEKMGAVNTVVRQ-ADGKYKGYNTDGLGFVRSLEDVV------ 117
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAA 415
G+ ++ GAGGA R + F G R + I + E+A+++ ++ +
Sbjct: 118 ------GTSHKQEKVLVLGAGGASRGICFALWQEGYRDITIANRTVEKARAICLEMDPSV 171
Query: 416 RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
+ + E GA I+ T G++ + +P+S E L + +V D VY P T L
Sbjct: 172 KAC-SLQQASDELGAYGIVIQTTSAGLNHSQFALPISLEHLANTAIVADIVYNPLMTPFL 230
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
+ ++ GA +V+G+ MF+ Q + +T
Sbjct: 231 EQSQKQGATVVTGLGMFIHQGALAYEHWT 259
>gi|144899674|emb|CAM76538.1| Quinate/Shikimate 5-dehydrogenase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 278
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 134/278 (48%), Gaps = 22/278 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
++ K+ G++ PVGHS+ P LH + +G YVP+ V +D F FA
Sbjct: 3 LSGKAKLAGVLGWPVGHSRSPRLHGYWLERLGIDGAYVPLPVRPEDFASVFRALPKMGFA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASI-TAIEDAI 350
G +V P+KE + DEV PLA+ I AVNT++ R DG ++G NTD + +E
Sbjct: 63 GANVTVPHKEQALILADEVEPLAKRIGAVNTLVVR-EDGSILGLNTDAFGFMQNLLETHP 121
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS 409
GY N R V+ GAGGA RA+ G + + + ERA+ LA+
Sbjct: 122 ASLGYLN-----------RPAVVLGAGGAARAVIAALADAGVPEIRLVNRSLERAEKLAA 170
Query: 410 DVMGAARPFEDILNFQPEKGAILANATPLGM--HPNTDRVPVSEETLRDYQLVFDAVYTP 467
++ G R + +L N T LGM P D + L +V D VY P
Sbjct: 171 EIGGPIR-VQQWDRLDLAGAGLLVNTTSLGMTGQPPLD---LDLSALPQDAVVNDIVYAP 226
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
R T LL A+A G +V G+ M L QA+ F+L+ G++
Sbjct: 227 RVTDLLLRAQARGNPVVDGLGMLLWQAVRGFSLWFGQQ 264
>gi|383811576|ref|ZP_09967039.1| putative shikimate dehydrogenase [Prevotella sp. oral taxon 306
str. F0472]
gi|383355819|gb|EID33340.1| putative shikimate dehydrogenase [Prevotella sp. oral taxon 306
str. F0472]
Length = 250
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 299
+GLI P+GHS N F + N N Y+ + ++ F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFDNENINARYINFEIPSIEDFIEVIDSNPELRGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGK---LIGYNTDCEASITAIEDAIKERGYK 356
KE V+ + D + P A AI AVN +IR GK L G+N+D +IE + ER +K
Sbjct: 64 KEQVIPYLDSLSPEATAIGAVN-VIRVTHKGKKTQLKGFNSDVIGFTRSIEPLL-ERHHK 121
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
++ G GGA +A+ +G +S G K ++
Sbjct: 122 KA-------------LILGTGGASKAIDYGLRSLGL----------ETKFVSRTKRDGIL 158
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLKD 475
+EDI +K ++ N TPLGM+PN D P + E + + L++D +Y P +T +
Sbjct: 159 CYEDITADIIQKYNVIVNCTPLGMYPNVDSCPKLPYEAMDSHTLLYDLLYNPDETLFMTK 218
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
GA++ +G+EM L QA + + G E
Sbjct: 219 GREQGAVVKNGLEMLLLQAFASWEFWNGDE 248
>gi|16800593|ref|NP_470861.1| hypothetical protein lin1525 [Listeria innocua Clip11262]
gi|16413998|emb|CAC96756.1| lin1525 [Listeria innocua Clip11262]
Length = 273
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD------LKKFFSTYSSPDFAGFSVG 296
+I P+ HS P + N F+ + N Y + +++ +KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFETEIKKLMDS----GVRGFNIT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ F DE+ LA A AVNT++R+ DGK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDG-------------KGYL 106
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD----- 410
G S ++ GAGGA +A+ KS A++ + + E+A + D
Sbjct: 107 EGLEEIRSITKDDSILITGAGGASKAIYLALKSHTEAKITVANRTTEKAIEMTKDNDNHH 166
Query: 411 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
M + +++ +F I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEQAEKELADF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+A+ GAI +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSMMKEAVLEQL 270
>gi|166030991|ref|ZP_02233820.1| hypothetical protein DORFOR_00672 [Dorea formicigenerans ATCC
27755]
gi|166029258|gb|EDR48015.1| shikimate dehydrogenase [Dorea formicigenerans ATCC 27755]
Length = 291
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 141/305 (46%), Gaps = 52/305 (17%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I+ T + LI PVGHS P +HN +F + + Y+ + D + +F
Sbjct: 3 KRISGTTTLLALIGSPVGHSGSPAMHNYSFEKLGLDYAYMAFEIKEDQVGEFLDAARLLK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF+V P K V + DE+ P AQ + A NT++ +GKLIG+NTD
Sbjct: 63 IRGFNVTMPCKMEVARQVDELSPAAQIMGASNTVVNE--NGKLIGHNTDG---------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFD---IDFERAK 405
G+ A G + + L G GGAG A+ GA + +F+ +FE+ +
Sbjct: 111 ---VGFVKNLAEHGVSVKDKTITLMGGGGAGTAIFVQLALDGASEIHVFNRKGANFEKLE 167
Query: 406 SLASDVMGAARPFEDILNFQPE-------------------KGAILANATPLGMHPNTDR 446
+A + IL F PE + IL NAT +GM PN
Sbjct: 168 KIA----------KKILEFAPECKIQVCDMADKKALYKSIGESDILVNATNVGMKPNEKG 217
Query: 447 VPVSEETL-RDYQLVFDAVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGK 504
+ + ++ R+ +V + +Y P++TR++++A+ AG +V G M L Q F+LFTG+
Sbjct: 218 TMIQDTSVYREDLVVAEIIYNPKETRMMREAKEAGVKCVVGGKGMLLWQGAEAFHLFTGQ 277
Query: 505 EAPKE 509
E P E
Sbjct: 278 EMPVE 282
>gi|72383151|ref|YP_292506.1| shikimate 5-dehydrogenase [Prochlorococcus marinus str. NATL2A]
gi|72003001|gb|AAZ58803.1| shikimate dehydrogenase [Prochlorococcus marinus str. NATL2A]
Length = 311
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 36/303 (11%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSS 287
K+ I T + GL+ +PV HS PI+HN + + + YV M + DL+K
Sbjct: 16 KMSTITGKTNLVGLLGQPVNHSLSPIMHNAAYEEMGLDWCYVAMPCESQDLEKVTKALRF 75
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
DF G ++ P+K+ V+K C+++ ++ I AVNT+I + + IG NTD + +T ++
Sbjct: 76 LDFKGLNITIPHKQEVLKACNKLTEISNEIQAVNTLIPE-ENNQWIGANTDVQGFLTPLK 134
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI--------FDI 399
D L + V+ G GG+ RA+ G S + V +I
Sbjct: 135 D---------------HNLKNKNVVVIGCGGSARAVVMGLSSLNVKKVTIIGRNDSSLNI 179
Query: 400 DFERAKSLASDVMGAARPFEDI-LNFQP--EKGAILANATPLGMH---PNTDRVPVSEE- 452
+ ++L S + + LN P ++ ++ N TP+GM+ N + VP+ E
Sbjct: 180 FVKSTRNLLSRRGISIESINNKELNVSPYIQEADLIINTTPIGMNDSKTNQENVPLGREI 239
Query: 453 --TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG-KEAPKE 509
L + +++D +YTPR T L+ + + G++M + Q L++G + P +
Sbjct: 240 WDCLSNKTILYDLIYTPRPTNWLQIGQQKNCFTIDGLDMLVEQGAFSIRLWSGFHDVPVQ 299
Query: 510 FMR 512
M+
Sbjct: 300 TMK 302
>gi|313895569|ref|ZP_07829125.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975695|gb|EFR41154.1| shikimate dehydrogenase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 286
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK+ G++ P+ HS P+L N R + +YV P+ D L+ F
Sbjct: 2 ITGRTKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKRDALRSAVLGLRDAGFC 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K ++ D + A+ I AVNT++ +DG+L G+NTD
Sbjct: 62 GFNVTIPFKTEIIAVLDALDEDARRIGAVNTVVV-GADGRLTGHNTDAA----------- 109
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASD 410
G+ G + G L G V+ GAGGA RA+ G GA V + + + + L +D
Sbjct: 110 --GFLAGFTACGVSLRGAYVVVLGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCAD 167
Query: 411 VM--GAARPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 464
G R F D F+ G+ +L TPLGM P+ + +P V + V+D +
Sbjct: 168 FAADGDVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLI 227
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
YTP +TR L++A G V+G M Q F L+TG MR ++
Sbjct: 228 YTPAETRFLREAARRGHRCVNGETMLAAQGAEAFFLWTGVRPDLLCMRRVL 278
>gi|291558262|emb|CBL35379.1| Shikimate 5-dehydrogenase [Eubacterium siraeum V10Sc8a]
Length = 300
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 139/294 (47%), Gaps = 32/294 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFR----HVNYNGIYVPMFVDDLKKFFSTYSSP 288
++ + VFG++ P+GH+ P +H F Y + P + L F + S
Sbjct: 19 NMTENKNVFGILGHPLGHTLSPQIHTRLFEISGEQAEYKILDTP--PEKLTDSFEYFKS- 75
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
GF++ PYK ++K CD + A+ +VN I +G GYNTDC
Sbjct: 76 -LTGFNITIPYKIDIIKMCDTLDDTAKRYNSVNCIAN--VNGVSTGYNTDCT-------- 124
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF--DIDFERAKS 406
G+ + G L ++ +L G GG GR +A G + I D D AK+
Sbjct: 125 -----GFTKAVGAMGMTLTNKVLLL-GCGGVGRMMAIETVREGGELTIAVRDADIPVAKA 178
Query: 407 LASDV---MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL--VF 461
L ++ +A+ +L+ ++ NATP+GM+PNTD P++EETL L F
Sbjct: 179 LCEEIKQNYNSAKVGFCLLSEVKGDFDLMVNATPVGMYPNTDASPLTEETLGRITLNGFF 238
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVS-GVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
DA+Y PR+T+L+K G VS G++M + QA +++G E E ++ I
Sbjct: 239 DAIYNPRETKLMKMVSDKGVKKVSGGMQMLVWQAAVAHTIWSGAEYTAEQVQTI 292
>gi|406576618|ref|ZP_11052245.1| shikimate 5-dehydrogenase [Streptococcus sp. GMD6S]
gi|404461165|gb|EKA07142.1| shikimate 5-dehydrogenase [Streptococcus sp. GMD6S]
Length = 284
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 31/283 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRMAAVVANPIKHSISPFIHNSAFEATATNGVYVAWEIEASDLAETVTNIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ F DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPFLDELSDEARLIGAVNTVVNH--NGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLASDVM 412
SF ++G+ + GAGGA +++ A G ++V +F + E+ + + +
Sbjct: 112 FKSLPSF--TISGKKMAILGAGGAAKSILAQAILDGVSQVSVFVRSVSMEKTRPYLTKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ + Q + K +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDLSDLQEKIAKSDLLVNATSVGMDGQSSPVPESI-VLPETLLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
Y P +T LK A + G V+G+ M L QA F L+TGKE P
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMP 271
>gi|374851393|dbj|BAL54354.1| quinate/shikimate 5-dehydrogenase [uncultured Chloroflexi
bacterium]
Length = 265
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSV 295
T+ GLI P+GHS P LH F + Y +P+ + L + + + + GF+V
Sbjct: 2 TERVGLIGWPLGHSLSPFLHQRAFAACGLDWRYDLLPVEAETLAERIQEWVAQGYRGFNV 61
Query: 296 GFPYKEAVMKFC--DEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
P+K V++ + +A+ A NT++R DG L NTD
Sbjct: 62 TIPHKRRVLELALITQRSAEVEALQAANTLVRL-EDGSLRAENTDW-------------L 107
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER-AKSLASDVM 412
G+ + G +AG ++ G GG+ +A+A+ + GA + F R + ++ DV+
Sbjct: 108 GFLQDLQAHGVEVAGASCLILGTGGSAQAVAYALECSGAAEIAFLSRSPRHPRHVSWDVL 167
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFDAVYTPRKTR 471
R +D L E+ ++ N TPLGM+P + P E+ L +V+D VY PR+TR
Sbjct: 168 ---RRSQDWL----ERVKLVVNCTPLGMYPQVESSPWPEDLPLPPQAIVYDLVYNPRRTR 220
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
L+ AE G + G+ M LRQA F L+TG+E
Sbjct: 221 FLEQAEKQGLPAIGGIGMLLRQAALSFTLWTGRE 254
>gi|406593670|ref|YP_006740849.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
gi|405789542|gb|AFS28284.1| shikimate 5-dehydrogenase [Chlamydia psittaci NJ1]
Length = 477
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 218/499 (43%), Gaps = 55/499 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQINMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
L + + G+GG+ +A+A GA++ IF+ A+ L+ G A P L
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFNRTKTHAEKLSVLCHGQAFP----L 382
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
N E I + L + P+ + + ++ D P+++ K A+ G
Sbjct: 383 NALSENHNI--DILILCLPPDVEIPEIYPP------VIIDINTLPKESLYTKKAKERGCQ 434
Query: 483 IVSGVEMFLRQAIGQFNLF 501
I+ G EMF QA+ QF+L+
Sbjct: 435 ILYGYEMFAEQALLQFSLW 453
>gi|86136752|ref|ZP_01055330.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
gi|85826076|gb|EAQ46273.1| shikimate 5-dehydrogenase [Roseobacter sp. MED193]
Length = 277
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 131/268 (48%), Gaps = 17/268 (6%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPY 299
G+I PV HSK P L + G YVPM V+ DL+ T F G +V P+
Sbjct: 10 GVIGCPVAHSKSPQLQTHWLKTHGIAGHYVPMHVEPEDLETVIRTLPKAGFVGVNVTIPH 69
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEAVMK D+V A+ + A NTII R SDG ++ NTD IT ++
Sbjct: 70 KEAVMKIADKVTDRAKLMGAANTIIFR-SDGSILADNTDGYGFITNLQQG---------- 118
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPF 418
A P +G VL GAGGA RA+ G +++ + ERA+ L SD +
Sbjct: 119 APDWVPTSGPAAVL-GAGGACRAVVASLIEAGVPEILLTNRTRERAEQLHSDFGKRIQVV 177
Query: 419 EDILNFQP-EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
+ +L E A++ N T LGM R+ V + L+ +V D +Y+P KT LL+ AE
Sbjct: 178 DWVLAGNIIEDAALVVNTTSLGM-VGKPRLRVPLDGLKPNMVVTDLIYSPLKTNLLQTAE 236
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
G +V G+ M L QA+ F + G+
Sbjct: 237 EMGCTVVDGLGMLLHQAVPGFERWFGQR 264
>gi|365853974|ref|ZP_09394229.1| putative shikimate dehydrogenase [Lactobacillus parafarraginis
F0439]
gi|363711647|gb|EHL95371.1| putative shikimate dehydrogenase [Lactobacillus parafarraginis
F0439]
Length = 296
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 31/303 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
V+ I+ T + GL++ P+ HS P +HN +F + N Y+ V +L + S
Sbjct: 2 VDRIDGHTILIGLMAYPIRHSMSPTMHNTSFVKLGLNYAYLAFEVGNKELPDAIQSIRSL 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
G ++ P K+ V+ D++ P+A+ + AVNTI+ DG L GY TD
Sbjct: 62 GMRGSNISMPNKQKVIPLLDKLDPVAKMVGAVNTIVN--DDGVLTGYTTDG--------- 110
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI------DF 401
G+ A + G ++GAGGAG A+ A + G + + IF+I +
Sbjct: 111 ----TGFMKSLADENLDIRGEKMTISGAGGAGTAIEIQAANDGVKEMSIFNIKDATWANA 166
Query: 402 ERAKSLASDVMGAARPFEDILN---FQPE--KGAILANATPLGMHPNTDRVPVSEET-LR 455
ER + ++ D+ + F+ E AI ++T +GM P D+ VS+ +
Sbjct: 167 ERNVKIINEQTDCKAQLFDLADQDAFKREIADSAIYCDSTGVGMKPLEDKTLVSDPSFFH 226
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+V+D VY PR T+L+ AE AG + +G+ M L Q F L+TG++ P +++R I
Sbjct: 227 KDMIVYDTVYAPRTTKLMTVAEEAGVNHVFNGLGMMLEQGAEAFKLWTGEDMPVDYIRNI 286
Query: 515 VLA 517
+ +
Sbjct: 287 LFS 289
>gi|388545085|ref|ZP_10148369.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
gi|388276725|gb|EIK96303.1| shikimate/quinate 5-dehydrogenase [Pseudomonas sp. M47T1]
Length = 271
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 129/265 (48%), Gaps = 22/265 (8%)
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN + + + +V V+D + + G +V PYK+AVM D + AQ
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVTAIRTLGVRGMNVSMPYKQAVMPHLDAIDESAQ 82
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNTI DG L GYNTD ++ A+++ + L G+ + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEVTR--------------LNGKRVAIVG 126
Query: 376 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 435
AGGA RA+ +G GA+V +F+ ER LA + A+ + +F + I+ NA
Sbjct: 127 AGGAARAVVYGCTQAGAQVTVFNRSAERGSELAQSL--GAQWGGAVEHFHAKAFDIVINA 184
Query: 436 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
T +G P+++ + + L+ + +V D + P +T LL+ A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLQSHLIVMDVAFMPVQTALLRQARTLGCGTVAGTRMLVHQA 241
Query: 495 IGQFNLFTGKEAPKEFMREIVLAKF 519
Q L+TG +AP + M + +L +
Sbjct: 242 CRQIELYTGHDAPIDVMEQAMLQEI 266
>gi|307701915|ref|ZP_07638924.1| shikimate 5-dehydrogenase [Streptococcus mitis NCTC 12261]
gi|307616730|gb|EFN95918.1| shikimate 5-dehydrogenase [Streptococcus mitis NCTC 12261]
Length = 284
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 143/307 (46%), Gaps = 55/307 (17%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F + NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATDTNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVISYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 414
SF ++G+ L GAGGA +++ A G +++ +F + S M
Sbjct: 112 FKSLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISVF---------VRSVSMKK 160
Query: 415 ARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVP---VSEE 452
RP+ ED+ Q + +L NAT +GM + VP V E
Sbjct: 161 TRPYLNKLQEQTGFKVDLYALEDVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLSE 220
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
TL LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E +
Sbjct: 221 TL----LVADIIYKPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIW 276
Query: 513 EIVLAKF 519
+ + K+
Sbjct: 277 QSLTEKY 283
>gi|295703111|ref|YP_003596186.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
gi|294800770|gb|ADF37836.1| shikimate 5-dehydrogenase [Bacillus megaterium DSM 319]
Length = 298
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 33/301 (10%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSP 288
V IN T++ GL++ P+GHS P +HN F+ + N Y+ V D L+ +
Sbjct: 4 VGRINGKTQLIGLLATPIGHSLSPSMHNMAFKKLGLNYAYLAFEVGNDSLEDAIKGLRAL 63
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
+ GF+V P K ++ F DE+ A+ AVNT++ +G L+G++TD
Sbjct: 64 NVKGFNVSMPNKTKILPFLDELADSAKFSGAVNTVVN--DNGVLVGHSTDG--------- 112
Query: 349 AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---------- 397
GY G + G+ L G+GGA +A A G + IF
Sbjct: 113 ----MGYIRNLKEHGVDITGKKMTLIGSGGAATPIAIQAALEGLEELTIFARHDEFYSKA 168
Query: 398 ----DIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSE-E 452
I E K ++ + D L + + IL N T +GM P + + +
Sbjct: 169 VENVKIINEEMKHVSCKAKLYSLEDTDRLREEIKTSDILTNGTGVGMKPLEEFSIIEDIS 228
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
LR +V D VY P +++LL+ AE+ G ++G+ M + Q F L+TGKE P E+++
Sbjct: 229 MLRPDLIVTDVVYMPMRSKLLEQAESIGCHTINGIGMMIWQGAMAFELWTGKEMPVEYIK 288
Query: 513 E 513
E
Sbjct: 289 E 289
>gi|448355080|ref|ZP_21543834.1| shikimate 5-dehydrogenase [Natrialba hulunbeirensis JCM 10989]
gi|445636424|gb|ELY89586.1| shikimate 5-dehydrogenase [Natrialba hulunbeirensis JCM 10989]
Length = 278
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 132/294 (44%), Gaps = 30/294 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
VFGL+ PVGHS+ P +H + + Y+ YV D DL+ + + G +V
Sbjct: 2 DVFGLLGNPVGHSRSPPMHEAAYDELAYDARYVTFEPDPSDLETAVAGADALGITGLNVT 61
Query: 297 FPYKEAVMKFCDEVHP--LAQAIAAVNTIIRRP------SDGKLIGYNTDCEASITAI-E 347
P+K+ V+ D V P LA I AVNTI P S G + G+NTD ++ A+ E
Sbjct: 62 IPFKQDVLAL-DLVEPDDLATRIGAVNTIDFEPDSSRPNSSGHVTGHNTDAAGALRALRE 120
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 407
+ G G F LA AG A V I + A L
Sbjct: 121 HDVTAAGADAVVVGAGGAGRAISFALADAG--------------ATVTIANRTESTAHEL 166
Query: 408 ASDVMGAAR--PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVY 465
A DV A E +L IL NAT +GM D PV L V DAVY
Sbjct: 167 ADDVPNATGYGLGEGVLESLLADADILVNATSVGME--EDATPVPAGALHVDLAVMDAVY 224
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
P +TRLL+DA AAGA V G M L Q + F L+TG++AP + M E + A+
Sbjct: 225 QPLETRLLRDAAAAGATTVDGAWMLLYQGVEAFELWTGRDAPVDVMNEALRAQL 278
>gi|417915530|ref|ZP_12559139.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. SK95]
gi|342833369|gb|EGU67650.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. SK95]
Length = 284
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAVDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + D++ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDKLSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF ++G+ + GAGGA +++ A G V + + E+ K + +
Sbjct: 112 FKSLPSF--TISGKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTKPYLTKLQ 169
Query: 413 GAAR------PFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVHLCALEDVSELQSRIADSHLLVNATSVGMDGQSSPVPESI-NLPETLLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|254432172|ref|ZP_05045875.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
gi|197626625|gb|EDY39184.1| shikimate 5-dehydrogenase [Cyanobium sp. PCC 7001]
Length = 295
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 135/299 (45%), Gaps = 36/299 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I+A T + G++ PV HS P +HN + + IY+ P +L + D
Sbjct: 5 ISASTALVGVLGDPVRHSLSPAMHNAALAALGLDWIYLALPTPAGELAAVVHALEALDCR 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEAV C E+ PLA + AVNT++RR + G L G NTD E + +
Sbjct: 65 GLNVTLPHKEAVAACCAELSPLAARVGAVNTLVRRQAGGWL-GTNTDVEGFLAPLR---- 119
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
+ G A GS R VL G GG+ RA+ G G + + +A +L
Sbjct: 120 ----REGHAWQGS----RAVVL-GCGGSARAVVAGLVELGCGAIA--VAGRQAANLERFA 168
Query: 412 MGAARPFEDILNFQPEK--------GAILANATPLGMHPNTD-----RVPVSE---ETLR 455
G R + L+ +L N TP+GM TD P+ E L
Sbjct: 169 AG-CRAWAPQLSLHAWHRLGELLPGCQLLVNTTPVGMASPTDPAAARACPLDEAGLAALT 227
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMRE 513
V+D +YTPR ++LL+ A G + G+EM ++Q L++G A P E MRE
Sbjct: 228 PQAWVYDLIYTPRPSQLLRRAAGRGCRTLDGLEMLVQQGAASLRLWSGTAAVPVEAMRE 286
>gi|320585990|gb|EFW98669.1| dehydroquinase class 1 [Grosmannia clavigera kw1407]
Length = 1584
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 219/520 (42%), Gaps = 59/520 (11%)
Query: 36 GADVVEIRLDCINNFQPGK-DLEIILTK---KPLPVLIVYRPKWAGGLY-EGDEHKRLEA 90
GAD VE+R+D + +F ++ L + K LP++ R GG + + D + L
Sbjct: 1080 GADAVELRVDLLESFAVDSVSTQVALLRSVAKKLPIIFTVRTVSQGGRFPDADTDQALAL 1139
Query: 91 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQ 150
+A +G +YVD E+ + +++ + + + TR I S + T S + G++ +
Sbjct: 1140 YRIAIRMGIEYVDLEMTMPDHVI-EAVTKSKGKTRIIASHHDPKGTLSWRNGGWMPHFNK 1198
Query: 151 A-TGADIIKLV---FSVNDITEIA--RIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNG 204
A DIIKL+ S+ D +A + L +H + P+IA ++G +G +S++L NG
Sbjct: 1199 ALQHGDIIKLIGVARSMEDNFAVAAFKTRMLATHAK-PMIALNMGSQGKLSRVL----NG 1253
Query: 205 ALVYGSLKGTPVLGLPTVESLRQTYKVEHINAD--TKVFGLISKPVGHSKGPILHNPTFR 262
L S P P S R+ + + D + F L P+ S+ P LH F
Sbjct: 1254 FLTPVSHPDLPFAAAPGQLSAREIRQALSLIGDLEQRRFVLFGMPIAKSRSPALHQALFD 1313
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
Y + SPDF G SV P K VM DEV A+AI AVNT
Sbjct: 1314 LTGLPHTYGLAETSSVADVLPIVRSPDFGGASVTIPLKLDVMDVVDEVTEAARAIGAVNT 1373
Query: 323 IIR-------RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
II + +LIG NTD I A+ A ER + +A AG ++ G
Sbjct: 1374 IIPVAASKGGKAGGARLIGDNTDWRGMIHALRGAGVERPSTSQSA------AG---LVVG 1424
Query: 376 AGGAGRALAFGAKSRG--------------ARVV-----IFDIDFERAKSLASDVMGAAR 416
+GG RA + + G A++V +++ S +S AA
Sbjct: 1425 SGGTTRAAVYALHALGYGPIYLAARNSANAAKIVDGFPASYNVQLLGPSSTSSTGADAAT 1484
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
P I+ P + + L + TL +++ + Y PR T +K A
Sbjct: 1485 PPSVIITTVPADKPLDDSVQGL-----LTTLLQRSTTLPGPRVLLEMAYMPRVTPAMKLA 1539
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
E G V G+E+ Q QF L+TG E R V+
Sbjct: 1540 EGFGWKTVPGLEVLAAQGWHQFQLWTGITPLYEDARAAVM 1579
>gi|407459542|ref|YP_006737645.1| shikimate 5-dehydrogenase [Chlamydia psittaci M56]
gi|405786336|gb|AFS25081.1| shikimate 5-dehydrogenase [Chlamydia psittaci M56]
Length = 477
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 213/500 (42%), Gaps = 57/500 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ +
Sbjct: 56 TL-----RKNPSLSEMAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNY-PNIKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKKHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++ +++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSEARIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPHELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
L + + G+GG+ +A+A GA++ IF+ A+ L+ G A P +
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFNRTKTHAEKLSVLCHGQAFPLHAVS 386
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-QLVFDAVYTPRKTRLLKDAEAAGA 481
IL +P E Y ++ D P+++ K A+ G
Sbjct: 387 ENHNIDILILC-------------LPPDVEIPEIYPPVIIDINTLPKESLYTKKAKERGC 433
Query: 482 IIVSGVEMFLRQAIGQFNLF 501
I+ G EMF QA+ QF+L+
Sbjct: 434 QILYGYEMFTEQALLQFSLW 453
>gi|153831888|ref|ZP_01984555.1| shikimate dehydrogenase [Vibrio harveyi HY01]
gi|148871886|gb|EDL70709.1| shikimate dehydrogenase [Vibrio harveyi HY01]
Length = 279
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 29/278 (10%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIY-VPMFVDD----LKKFFSTYSSPDFAGFSVGF 297
LI + + S+ P HN R +N + +Y + FV D L+K D ++ +
Sbjct: 6 LIGQNIQRSQSPSFHNQLARELNVDLLYQLEEFVTDSCETLQKRTQQLFDNDIDSANITY 65
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
PYKE ++ D++ P AQ + A NT+I+R + K++ +NTD I A +
Sbjct: 66 PYKEQILAVADQISPCAQRVNAANTLIKR--NNKIVAFNTDYSGFIAAFQ---------- 113
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLAS-----DV 411
F L G + VL G GG G+AL F GA ++ ++D D + K LA D+
Sbjct: 114 ---QFECQLPGHV-VLIGCGGVGKALCFSLVDLGATQIALYDHDENKMKQLAESLNKEDI 169
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
++ ++ +L N TP+G H +T P+ + L VFDAVYTP +T
Sbjct: 170 NTVCLDASNLADYVMNADGVL-NCTPVG-HYSTPGCPIEQSWLETQSWVFDAVYTPHETE 227
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
L A+ +SG E+F QA F LFTG +E
Sbjct: 228 FLLAAKHKYIPTLSGFELFFYQAHDAFKLFTGVTPTQE 265
>gi|422415991|ref|ZP_16492948.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
gi|313623707|gb|EFR93855.1| shikimate 5-dehydrogenase [Listeria innocua FSL J1-023]
Length = 273
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 36/289 (12%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD------LKKFFSTYSSPDFAGFSVG 296
+I P+ HS P + N F+ + N Y + +++ +KK + GF++
Sbjct: 6 VIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDTFEAEVKKLMDS----GVRGFNIT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ F DE+ LA A AVNT++R+ DGK G+NTD +GY
Sbjct: 62 TPFKERILPFLDELEDLAAASGAVNTVLRK--DGKWYGFNTDG-------------KGYL 106
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFERAKSLASD----- 410
G S ++ GAGGA +A+ KS A++ + + E+A + D
Sbjct: 107 EGLEEIRSITKDDSILITGAGGASKAIYLALKSHTDAKITVANRTTEKAIEMTKDNDNHH 166
Query: 411 VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKT 470
M + +++ +F I+ T +G+ + ++ P+S L + D +Y P +T
Sbjct: 167 AMTLEQAEKELADF-----TIIIQTTSIGLEASKNKSPISLSNLTKGTICSDIIYNPAET 221
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LK+A+ GAI +G+ MF+ Q F ++TG + + M+E VL +
Sbjct: 222 AFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQL 270
>gi|269925229|ref|YP_003321852.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
gi|269788889|gb|ACZ41030.1| shikimate 5-dehydrogenase [Thermobaculum terrenum ATCC BAA-798]
Length = 289
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 40/295 (13%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K G+I P+ HS P+ F + IY V +DL+ FF + ++ G +V
Sbjct: 2 KQVGVIGYPIKHSISPVFQQAAFDALGIEAIYKAYEVPPEDLRSFFFNLRNGNWLGVNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K A K DE A NTII +G+L +NTD I A+E E G++
Sbjct: 62 IPHKSAAAKLADERSQEVSFTGAANTIISM--NGRLKAHNTDISGFILALE----ENGFQ 115
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ + V+ G+GG RA+ + A + + ++ SL S++
Sbjct: 116 ---------IKSKRAVVLGSGGTTRAVVYALAICEAQSIAVIGRSQDKVHSLISEL---- 162
Query: 416 RPF--------------EDILNFQPEKGAILANATPLGMHPNTDR---VPVSEETLRDYQ 458
+PF +D + Q + IL N TP+GM TD+ PVS+E L
Sbjct: 163 KPFFEHKQVTVTGHSWEKDSIRRQIQNSDILINTTPIGMK-GTDQEHLSPVSKEDLSSDL 221
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+VFD VY P T LL A+ GA +SG+EM + Q F L+TG+E P + MR+
Sbjct: 222 IVFDVVYNPIMTPLLTYAKDVGASTISGIEMLIYQGAESFRLWTGQEPPVDIMRK 276
>gi|310659677|ref|YP_003937398.1| Shikimate dehydrogenase [[Clostridium] sticklandii]
gi|308826455|emb|CBH22493.1| Shikimate dehydrogenase [[Clostridium] sticklandii]
Length = 278
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 133/269 (49%), Gaps = 22/269 (8%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 298
FGLI K + HS +LH + G Y V+ +L+K ++ + AG +V P
Sbjct: 6 FGLIGKTLDHSISDVLHQEIMKEAGIKGSYGMFEVEPENLEKVIASIRVLNIAGLNVTIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK+ +M++ DE+ A I AVNTI + + K IG NTD + G+K
Sbjct: 66 YKQDIMRYLDEIDQKAIEIGAVNTITLK--ENKAIGTNTDYD-------------GFKLC 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
G ++ F L GAGGA +A + + +++ + + ++ K D P
Sbjct: 111 LDKAGISISKNGFTLLGAGGAAKAVIKVLQDEQASKITLISRNPDKTKLEYPDF--EILP 168
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
+++I + + L N TP+G +PN + P+ +E ++ Y V D +Y P+KT+LLK A+
Sbjct: 169 YDEIHEIKDK--YCLINCTPVGTYPNIEECPIKKEDIKKYSNVVDLIYNPQKTKLLKLAD 226
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEA 506
G ++G+ M + QAI ++ K+A
Sbjct: 227 EYGINNINGLYMLIGQAIKAQEIWASKQA 255
>gi|407455557|ref|YP_006734448.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|407458292|ref|YP_006736597.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|407460913|ref|YP_006738688.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449071371|ref|YP_007438451.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
gi|405782100|gb|AFS20849.1| shikimate 5-dehydrogenase [Chlamydia psittaci GR9]
gi|405784707|gb|AFS23453.1| shikimate 5-dehydrogenase [Chlamydia psittaci WS/RT/E30]
gi|405787510|gb|AFS26254.1| shikimate 5-dehydrogenase [Chlamydia psittaci WC]
gi|449039879|gb|AGE75303.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
protein [Chlamydophila psittaci Mat116]
Length = 477
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 219/499 (43%), Gaps = 55/499 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P A++ +Q+L ++ D +E+R+D + + + +I L KKP+
Sbjct: 1 MLCATISGPTFAEAEQQLLHSL-----PLVDSIELRIDYLLSLSSDELKHLIALAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LAE L +Y+D + L K ++ + +
Sbjct: 56 TL-----RKNPSLSEIAWIER--TIQLAE-LQPEYLDIDKDFPKEALAKIQKNYLN-IKI 106
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
I+S + D + E + L + M A K+ + + R Q+ H
Sbjct: 107 ILSYHSD----TSEHIPNLCNEMLRRQAHHYKIAITSTKSIDTLRCIQIKQHLPENTTLL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++++++GLI
Sbjct: 163 CMGNAGIASRILSPLMKNAINYASGINAPKVAQGQLSIEDLL-AYNYTNLSSESRIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
PV S + HN F + N Y+ + + +L +FFS F G SV P+K
Sbjct: 222 GNPVDRSISHLSHNKLFSELQLNMSYIKILLTPYELNEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+++ D + P Q + NT++ R D K+ GYNTD G N
Sbjct: 282 VLEYIDILDPSVQQCQSCNTLVFR--DNKIAGYNTD-------------GLGLLNLLKRK 326
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
L + + G+GG+ +A+A GA++ IF+ A+ L+ G A P L
Sbjct: 327 NILLQNKHVGIVGSGGSAKAIATTFADSGAQISIFNRTKTHAEKLSVLCHGQAFP----L 382
Query: 423 NFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
N E I + L + P+ + + ++ D P+++ K A+ G
Sbjct: 383 NALSENHNI--DILILCLPPDVEIPEIYPP------VIIDINTLPKESLYTKKAKERGCQ 434
Query: 483 IVSGVEMFLRQAIGQFNLF 501
I+ G EMF QA+ QF+L+
Sbjct: 435 ILYGYEMFAEQALLQFSLW 453
>gi|110596793|ref|ZP_01385083.1| shikimate 5-dehydrogenase [Chlorobium ferrooxidans DSM 13031]
gi|110341480|gb|EAT59940.1| shikimate 5-dehydrogenase [Chlorobium ferrooxidans DSM 13031]
Length = 290
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 36/298 (12%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFSTYSSPDFAGFSV 295
K+ GLI + V +S P++HN ++ Y + D + + AGF+V
Sbjct: 6 KILGLIGRAVDYSWSPLIHNTASELLDLPYCYTIFNIADPEMIGDALRGAKALGIAGFNV 65
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYK+ V+ F DE+ A I AVNTII R DGK+ G+NTD E G+
Sbjct: 66 TIPYKKTVVPFLDELSREAATIGAVNTIIIR--DGKMTGHNTDIE-------------GF 110
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRAL--AFGAKSRGARVVIFDIDFERAKSLASD--- 410
+ S + G + G GGA A AF +++++ D E+A ++
Sbjct: 111 ATPLKPYASLIEGNPVSVFGCGGAALAAIEAFRLFFSPRKIMVYARDPEKATAMLDGYEY 170
Query: 411 ----VMGAARPFEDILNFQPEKGAILANATPLGMHP-NTDR----VPVSEETLRDYQLVF 461
+ R E+ Q A++ NATP+G N D+ VP+ E + Q+V+
Sbjct: 171 KELVTICHQRLVEE----QLRSCAVMVNATPIGTKGGNNDQTESIVPLDRELIHKGQIVY 226
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D VY P T LL +A+ GA +SG+EM + QA F L+TGK P E ++++++ +
Sbjct: 227 DMVYNPLDTPLLLEAKRKGATTISGIEMLIGQAALSFALWTGKAMPVEAVKKVIMQEI 284
>gi|427393579|ref|ZP_18887357.1| shikimate 5-dehydrogenase [Alloiococcus otitis ATCC 51267]
gi|425730580|gb|EKU93415.1| shikimate 5-dehydrogenase [Alloiococcus otitis ATCC 51267]
Length = 430
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 35/274 (12%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYK 300
+GLI + HSK +H F + +Y + +P DL+ F S F G +V PYK
Sbjct: 20 YGLIGASLSHSKSQEIHE-AFGYYSYRLVNIP--AQDLEAFMKQRS---FKGINVTIPYK 73
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
E VM + D V P AQ I AVNTI+ + +G L+GYNTD G+ +
Sbjct: 74 ETVMYYLDYVDPRAQEIGAVNTIVNQ--NGHLLGYNTDY-------------LGFAHSLK 118
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFED 420
++G L G+ ++ G+GGA + + AK A+ +I V+ + P +
Sbjct: 119 AYGIHLKGKKVMVLGSGGASKMVQTYAKDHSAQEII--------------VISRSGPKDY 164
Query: 421 ILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
+ Q + + NATP+GM+P+ + + V D +Y P KT+LL +A+ G
Sbjct: 165 YMLDQFQDFDTIINATPVGMYPHNLESKIDLANFQHLDSVIDLIYNPLKTKLLLEAKEKG 224
Query: 481 AIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
I+SG+ M + QA +FTG++ + + +
Sbjct: 225 VKIMSGLLMLVAQAFYACQIFTGQDLEEALLAHV 258
>gi|146318905|ref|YP_001198617.1| shikimate 5-dehydrogenase [Streptococcus suis 05ZYH33]
gi|146321113|ref|YP_001200824.1| shikimate 5-dehydrogenase [Streptococcus suis 98HAH33]
gi|253751980|ref|YP_003025121.1| shikimate 5-dehydrogenase [Streptococcus suis SC84]
gi|253753805|ref|YP_003026946.1| shikimate 5-dehydrogenase [Streptococcus suis P1/7]
gi|253755319|ref|YP_003028459.1| shikimate 5-dehydrogenase [Streptococcus suis BM407]
gi|386578100|ref|YP_006074506.1| shikimate 5-dehydrogenase [Streptococcus suis GZ1]
gi|386580154|ref|YP_006076559.1| shikimate 5-dehydrogenase [Streptococcus suis JS14]
gi|386582177|ref|YP_006078581.1| shikimate 5-dehydrogenase [Streptococcus suis SS12]
gi|386588364|ref|YP_006084765.1| shikimate 5-dehydrogenase [Streptococcus suis A7]
gi|403061736|ref|YP_006649952.1| shikimate 5-dehydrogenase [Streptococcus suis S735]
gi|166219225|sp|A4W235.1|AROE_STRS2 RecName: Full=Shikimate dehydrogenase
gi|166219227|sp|A4VVS8.1|AROE_STRSY RecName: Full=Shikimate dehydrogenase
gi|145689711|gb|ABP90217.1| Shikimate 5-dehydrogenase [Streptococcus suis 05ZYH33]
gi|145691919|gb|ABP92424.1| Shikimate 5-dehydrogenase [Streptococcus suis 98HAH33]
gi|251816269|emb|CAZ51897.1| shikimate 5-dehydrogenase [Streptococcus suis SC84]
gi|251817783|emb|CAZ55535.1| shikimate 5-dehydrogenase [Streptococcus suis BM407]
gi|251820051|emb|CAR46278.1| shikimate 5-dehydrogenase [Streptococcus suis P1/7]
gi|292558563|gb|ADE31564.1| Shikimate 5-dehydrogenase [Streptococcus suis GZ1]
gi|319758346|gb|ADV70288.1| shikimate 5-dehydrogenase [Streptococcus suis JS14]
gi|353734323|gb|AER15333.1| shikimate 5-dehydrogenase [Streptococcus suis SS12]
gi|354985525|gb|AER44423.1| shikimate 5-dehydrogenase [Streptococcus suis A7]
gi|402809062|gb|AFR00554.1| shikimate 5-dehydrogenase [Streptococcus suis S735]
Length = 289
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 146/302 (48%), Gaps = 32/302 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
+I+ T++ +++KP+ HS P +HN F+ NG+YV + +DL D
Sbjct: 2 NIDGYTRLAAVVAKPIKHSISPFIHNLAFKETGVNGVYVAWEIPEEDLAVTLENIKRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+AV+ + D + A+ I AVNT+I + DG LIG+NTD ++E
Sbjct: 62 FGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVIHQ--DGLLIGHNTDGIGFFKSLE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF--DIDFERAK-S 406
K RG++ + + + G GGA A+ A GA+ + IF ER + S
Sbjct: 117 KLRGFQ---------VRNKRLTILGGGGASTAIIAQATLDGAKEITIFCRQQSLERTQAS 167
Query: 407 LASDVMGAARPFE-------DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR--DY 457
L P + +L +L N T +GM + VP T+R +
Sbjct: 168 LTPIARATGVPMQILALDDSQLLQEHITNSDLLVNGTSVGMDGYSQPVP---STIRFPEN 224
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
LV D +Y P +T LLK A++ G ++G+ M L QA F +TG+E P + + + ++
Sbjct: 225 LLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQSWTGQEMPTDLIWDQLVQ 284
Query: 518 KF 519
K+
Sbjct: 285 KY 286
>gi|320536898|ref|ZP_08036890.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
gi|320146254|gb|EFW37878.1| putative shikimate 5-dehydrogenase [Treponema phagedenis F0421]
Length = 496
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 226/524 (43%), Gaps = 64/524 (12%)
Query: 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-----P 64
T IC L ++E+ L + Q D+ E+R D + QP E++L ++
Sbjct: 2 TPKICLVLTEDTIEKNLV-LVQKYRSLIDIAELRADFL---QPQ---EVLLIRRFPELAG 54
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRL----EALHLAEDLGA---DYVDFE--LKVAS----- 110
+PV++ R + GG + E R+ L ++ A Y+D E L+ S
Sbjct: 55 IPVILTVRRRIDGGRFTAGEATRVTIFARGLAFSDPDPAKNFSYIDLEGDLQAPSIEEAA 114
Query: 111 -----NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165
I+ +Y+ ++ T ++D E + +++ + +I+K+ + N
Sbjct: 115 RAFNITIIRSKYNHKKAIT------DIDAE----------IQQVRRSDDEIVKIAYKANS 158
Query: 166 ITEIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVY---GSLKGTPVLGLPTV 222
++++ +F+ +H + I ++G G+ S+LL+ + N + Y + GL
Sbjct: 159 LSDVTNLFRFANHERGRCILVAMGAYGVPSRLLAGRLNSEITYVMPQEKTSEFIPGLIDP 218
Query: 223 ESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFF 282
SL Y+ + IN TK+FG++ V S GP +HN + N N +Y+P+ +
Sbjct: 219 FSLVYLYRFKQINEKTKIFGVVGSDVSESLGPQMHNKAYAKQNINAVYIPINARVSEDVI 278
Query: 283 STYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEAS 342
+G S+ P+K+ ++ +E AI A NT + S+G +NTD E+
Sbjct: 279 EFAEVAGVSGLSIDHPFKKPIVSSMNECSKTTTAIRAANTAVY--SNGSWKAFNTDVESF 336
Query: 343 ITAIEDAIKERGYK-NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401
A+++ ++ + + N A G+ A + A G+A F A+ + F
Sbjct: 337 SKALQEFLQVKNLRFNRVAIIGAGGAAQAVAYAVKQLHGKACIFNRTVEKAKQIALPYRF 396
Query: 402 ERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
+ A ++ A + + +I+ T +G + P+ T + VF
Sbjct: 397 KWA------ILAPAS-----VKLLEKYSSIIIQTTTVGNSFSLAEDPLFFYTFTGKEAVF 445
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
D Y P KT LL AE AG I +G M Q QF +FTG++
Sbjct: 446 DLNYKPEKTALLTHAEEAGCKITNGYRMLEYQTYRQFKIFTGED 489
>gi|404482073|ref|ZP_11017301.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
gi|404344769|gb|EJZ71125.1| shikimate 5-dehydrogenase [Clostridiales bacterium OBRC5-5]
Length = 289
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 144/290 (49%), Gaps = 24/290 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-DDLKKFFSTYSSPDFAG 292
I+ADTKV+G+I PV HS PIL N + +N + Y V +++K+ + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
F+V PYK+ ++ ++ A+ I A+NT+I+ + K GYNTD ++
Sbjct: 62 FNVTIPYKKDMLDIVSDIDDRAKKIGAINTLIKTENGYK--GYNTDIIGLGMSL------ 113
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDV 411
Y N + + G+ ++ GAGGA +A+ + A G + + + + + +AK L ++V
Sbjct: 114 --YNNSLS-----IKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELKAEV 166
Query: 412 ------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-QLVFDAV 464
+ + + +N + + T +GMHPN + + EE + D +
Sbjct: 167 GIKDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAFYEKCNSGIDLI 226
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
YTP +T +K ++ G I ++G++M + Q + F ++ + K+ + ++
Sbjct: 227 YTPFETSFIKKMKSKGKICINGLDMLILQGVASFEIWNNIKVKKDTIEKV 276
>gi|164688577|ref|ZP_02212605.1| hypothetical protein CLOBAR_02222 [Clostridium bartlettii DSM
16795]
gi|164602990|gb|EDQ96455.1| putative shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 289
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 31/296 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFR--HVNYNGIYVPMFVDDLKKFFSTYSSPDF 290
I+ T + GLI PVGHS P ++N +F ++Y + + V+ + + + + +
Sbjct: 2 EISGRTGLLGLIGSPVGHSGSPAMYNYSFEILDLDYKYLAFDIPVEKTEDAVNAFRTFNM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K V K+ DE+ P ++ I A NTII + DGKLIG TD
Sbjct: 62 KGGNVTMPCKGEVAKYMDELSPASRIIGACNTIINK--DGKLIGDITDG----------- 108
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK- 405
+GY G + G+ + GAGGA A+ A GAR + IF D FE+A+
Sbjct: 109 --KGYVRNLKENGVDIKGKKMTIMGAGGAATAIQVQAALDGAREISIFNKKDAFFEKAQK 166
Query: 406 ---SLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETL-RD 456
S+ +V DI L + IL NAT +GM P + + + ++ R
Sbjct: 167 TVESIKKEVPDCIVNLFDIDDTETLYAEIATSDILTNATLIGMKPYDNETNIKDTSVFRK 226
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+V D VY P KT+++ DAE AG ++ G M L Q + F LF E P E ++
Sbjct: 227 DLVVTDVVYNPIKTKMILDAEEAGCKVIGGKGMLLYQGVEAFKLFMECEMPVEEVK 282
>gi|71019047|ref|XP_759754.1| hypothetical protein UM03607.1 [Ustilago maydis 521]
gi|74701529|sp|Q4P8F6.1|ARO1_USTMA RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|46099277|gb|EAK84510.1| hypothetical protein UM03607.1 [Ustilago maydis 521]
Length = 1715
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 226/548 (41%), Gaps = 92/548 (16%)
Query: 29 MYQAKAEGADVVEIRLDCIN-NFQP------------GKDLEIILTKKPLPVLIVYRPKW 75
+ ++ G+D +E R D +N + QP L + + LP++ R
Sbjct: 1177 LIRSMESGSDALEFRADLLNPSGQPVTTPQIPPTEYVKNQLAALRHRTSLPIVFTVRTHS 1236
Query: 76 AGGLY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN--- 131
GG++ +G +H+ E + LA +Y+D EL ++L + + ++ I S +
Sbjct: 1237 QGGMFPDGKQHEYFELISLALRHACEYIDLELGWDDDLLSAVVQA-KGNSQIIASWHDWS 1295
Query: 132 --LDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYSV 188
LD E+ S + R A II ++ D + R +S P++A ++
Sbjct: 1296 GRLDWESESTAKIYEKACRFGDI-AKIIGKATTMEDNYSLERFRAKVSATATKPLLAVNM 1354
Query: 189 GERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISK 246
G G +S++++P F + + P P S RQ + AD + F L
Sbjct: 1355 GSVGQLSRIVNPVFTPI----THEAMPFKAAPGQLSFRQVQTALSLIGQADARRFALFGS 1410
Query: 247 PVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVMK 305
P+GHS P+LHN F + Y + ++ + + SPDF G SV P+K ++K
Sbjct: 1411 PIGHSLSPLLHNTGFAALGLPHQYELLESTEINDAVAAFVRSPDFGGASVTIPHKLNIIK 1470
Query: 306 FCDEVHPLAQAIAAVNTIIR-RPSDG---KLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
DEV A+ I AVNTII R + G L+G NTD A T +++ T
Sbjct: 1471 LLDEVTDEAKTIGAVNTIIPIRDAQGVVTSLVGDNTDWIAIETLARRSLR-------TVH 1523
Query: 362 FGSP-LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPFE 419
P L G ++ GAGG+ RA F G R+++F+ A+ LA +V P E
Sbjct: 1524 LADPNLTG---LVIGAGGSARAALFALYRLGVKRILLFNRTLANAEKLAREV-----PPE 1575
Query: 420 ---DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-----------------L 459
+L E + A+ +P + N +P TL +
Sbjct: 1576 WNVSVLTSLDEVAQLSADQSPSVVVSN---IPAEGSTLDASSRGLIHLPTCMLRNPAGGV 1632
Query: 460 VFDAVYTPRKTRLLKDAEAAGA-------------------IIVSGVEMFLRQAIGQFNL 500
V D Y P T LL+ A+ V G+ + L Q QF+
Sbjct: 1633 VIDMSYKPHYTSLLQLAQQVNTNHELAIGTNATKAPTRKLWAAVPGITILLEQGCHQFHR 1692
Query: 501 FTGKEAPK 508
+TG+EAP+
Sbjct: 1693 WTGREAPR 1700
>gi|354594119|ref|ZP_09012162.1| shikimate dehydrogenase [Commensalibacter intestini A911]
gi|353673230|gb|EHD14926.1| shikimate dehydrogenase [Commensalibacter intestini A911]
Length = 279
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 134/274 (48%), Gaps = 21/274 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I K+ ++ P+ HS+ P+LHN + +G Y+P+ V +D K + F
Sbjct: 4 ITGKAKIAAVLGWPIEHSRSPLLHNFWLQRHQIDGAYIPLAVKAEDFKNVIQGMKAAGFK 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+KEA + CD V A+ + +VNT + DGK+ G +TD + + ++DA
Sbjct: 64 GCNVTIPHKEAAYQCCDIVDETAKKMGSVNT-LWFTEDGKIHGTSTDGDGFVANLKDA-- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV 411
L + ++ GAGGA R++A+ GA++ I + +RA+ L D
Sbjct: 121 -----------DVTLTDKKVLILGAGGAARSVAYSLIQDGAQITITNRTLQRAEQLVRD- 168
Query: 412 MGAARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
+GA + E ++ E G +L N T LGM D + + +D +V D VY PR
Sbjct: 169 LGAGQIIE-WQSWIKELGQFDVLVNTTSLGMEGKDDYLFDLQHASKDL-VVTDIVYVPRI 226
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
T LL+ AE G V G+ M L QA F+ + G
Sbjct: 227 TPLLEAAELKGLKTVEGLGMLLHQARLGFSKWFG 260
>gi|300711893|ref|YP_003737707.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|448295583|ref|ZP_21485647.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|299125576|gb|ADJ15915.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
gi|445583682|gb|ELY38011.1| shikimate 5-dehydrogenase [Halalkalicoccus jeotgali B3]
Length = 273
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 137/286 (47%), Gaps = 29/286 (10%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGF 297
V+GL+ PVGHS P +H +R + + YV D L+ S S+ G +V
Sbjct: 3 VYGLLGNPVGHSLSPPMHEAAYRELGMDARYVTFEPDPESLEAAISGASALGIKGLNVTI 62
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K+ V+ E+ LA I AVNTI G GYNTD + A+E
Sbjct: 63 PFKQEVLTLV-ELDDLADRIGAVNTI---DLTGTPTGYNTDAAGARRALE---------- 108
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV---MGA 414
L G VL GAGGA RA+AF GA + I + ERA+ LA+ V G
Sbjct: 109 ---RHDVDLDGARAVLIGAGGAARAIAFVLADEGATIQIANRTKERAEELATAVPQTTGH 165
Query: 415 ARP-FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
P D+L E +L NAT +GM TD PV E+L + V D VY P +TRLL
Sbjct: 166 GLPDLPDLL----ENADVLINATSVGME--TDTSPVPAESLHRHLTVMDVVYRPLETRLL 219
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+DA+ GA V G M L Q + +TG+EAP E M E + +
Sbjct: 220 RDAKQTGAETVDGGWMLLYQGVEALERWTGREAPVEAMNETLRGEL 265
>gi|238598730|ref|XP_002394684.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
gi|215464118|gb|EEB95614.1| hypothetical protein MPER_05383 [Moniliophthora perniciosa FA553]
Length = 518
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 224/527 (42%), Gaps = 65/527 (12%)
Query: 36 GADVVEIRLDCINNFQPGKDLEI-----------------ILTKKPLPVLIVYRPKWAGG 78
G D +E+R+D + + +D+EI + PLP++ R GG
Sbjct: 7 GVDALELRVDLLRS---PRDVEIAGHHIPDRSYVADQVAALRRVSPLPIVYTVRTASQGG 63
Query: 79 LY-EGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP 137
+ + K E L LA LG +Y+D E+ + + K S + ++ I S + D
Sbjct: 64 AFPDNAPDKAFELLELALILGVEYIDVEISLPEEKI-KTLISRKGASQIIASWH-DWSGN 121
Query: 138 SEEDLGYLVSR--MQATGADIIKLVFSVNDITEIARIFQLLSHCQ-----VPIIAYSVGE 190
+ D + ++ + + DI+K+V N++ + + ++ P +A ++G
Sbjct: 122 MKWDGAEVQAKYDLADSLGDIVKIVGKANNLQDNPELQHFVTKVNRRTNAKPFLAINMGT 181
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHI--NADTKVFGLISKPV 248
G +S++L N + P P S + + H+ K F L P+
Sbjct: 182 EGQMSRIL----NTTTTPVTHPLLPNRAAPGQLSFAEIQQALHLLGQKPHKKFYLFGNPI 237
Query: 249 GHSKGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
HS P LHN F+ + Y D + K+ ++P+F G SV P+K ++
Sbjct: 238 SHSLSPTLHNTGFQLLGLPYDYSLFQTDGIGKEIRDIIAAPNFGGASVTIPFKLDIISVL 297
Query: 308 DEVHPLAQAIAAVNTII-RRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASFGS 364
DE+ P A+++ AVNTI+ + +DG L G NTD G K ++ +
Sbjct: 298 DELSPAAKSMGAVNTIVAKSAADGSRILYGDNTDW-------------LGIKGSISARIA 344
Query: 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMGAARPFEDILN 423
P + ++ G+GG RA + GA+ + +++ E+A +L + A D L
Sbjct: 345 PGSIHAALIIGSGGTARAAIYALHDLGAKCIYLYNRTREKAVALQKEFTEANIQVLDKLG 404
Query: 424 FQPEK--------GAILANATPLGMHPNTDRVPVSEETLRDYQ-LVFDAVYTPRKTRLLK 474
E + A T + PN+ +P S RD +V D Y P +T LLK
Sbjct: 405 QWSESTPPANIIISTVPATDTSIEPQPNSLYLPASLFAYRDGPGVVIDMAYKPVETPLLK 464
Query: 475 DA--EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
A A GVE+ L+Q QF +TG+ APK + + V K+
Sbjct: 465 LAITTANNWATAQGVEVLLQQGYYQFEAWTGRRAPKASISKTVWEKY 511
>gi|293400587|ref|ZP_06644732.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305613|gb|EFE46857.1| shikimate dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 290
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 30/303 (9%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I T++ GLI+ P+ HSK P +HN F + + Y+ V + L+ + +
Sbjct: 3 ERITGHTELIGLIATPIRHSKSPTMHNEAFAKLGLDYAYLAFEVGNEQLEDAVKGFKALS 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + K+ D + P A+ AVNT++ G L G+ TD + A++D
Sbjct: 63 VRGWNVSMPNKTVIGKYLDHLSPAAELCGAVNTVVN--DHGVLTGHITDGIGYMRALKDN 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
+ G+ + GAGGA A+ A G + + +F D +ERA+
Sbjct: 121 -------------NIDVIGKKMTIVGAGGAATAIEIQAALDGVKELSVFNRKDEFWERAQ 167
Query: 406 SLASDV---MGAARPFEDILNFQPEKGAI-----LANATPLGMHPNTDRVPVSEET-LRD 456
++ D+ + + + I ANAT +GM P ++ + + + LR
Sbjct: 168 QNVKNINEKTNCKATLYDLADTESLRREIADSYLFANATGVGMKPLEGQMVIPDASFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY P KT+LL+ AE+ G ++G+ M L Q F ++TGKE P E+M+EI+
Sbjct: 228 ELIVTDVVYMPEKTKLLEVAESVGCKNMNGMGMMLYQGAAAFEMWTGKEMPIEYMKEILN 287
Query: 517 AKF 519
F
Sbjct: 288 IHF 290
>gi|358464538|ref|ZP_09174502.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 058 str.
F0407]
gi|357066938|gb|EHI77071.1| shikimate dehydrogenase [Streptococcus sp. oral taxon 058 str.
F0407]
Length = 284
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF ++ + + GAGGA +++ A G V + + E+ + + +
Sbjct: 112 FKSLPSF--KISDKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLNKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q K +L NAT +GM + VP S D LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQERIAKSDLLVNATSVGMDDQSSPVPTSIVLPEDL-LVADVI 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|410670626|ref|YP_006922997.1| shikimate 5-dehydrogenase [Methanolobus psychrophilus R15]
gi|409169754|gb|AFV23629.1| shikimate 5-dehydrogenase [Methanolobus psychrophilus R15]
Length = 273
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 141/283 (49%), Gaps = 24/283 (8%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
VF + PVGHS P +HN F + Y V ++LK + + F G ++
Sbjct: 4 VFAVFGDPVGHSLSPAMHNAAFEALGMECTYHAFKVGRENLKDALAGAKAMGFGGVNLTV 63
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P K+ + D PLA AI AVNTI + + GYNTD + A+E+
Sbjct: 64 PLKQEALSIAD-ADPLAAAIGAVNTIDFKEG---MKGYNTDGLGAKRALEEE-------- 111
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDV--MGAA 415
G + G ++AGAGGA RA+AF GA V I + E+A LA+DV +G
Sbjct: 112 -----GVDIRGSEVLIAGAGGAARAIAFQFARDGASVTIANRTPEKALELAADVSPVGKV 166
Query: 416 RP--FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
R FE++ E L N T LGMHP+T+R + E + VFD VY P +TRLL
Sbjct: 167 RGCGFENLRALIGESDT-LVNCTVLGMHPDTERTIATSEDMHPDLTVFDIVYNPLETRLL 225
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
K+A AGA V+GV M + Q F ++TG E P + M+ VL
Sbjct: 226 KEARLAGAKRVNGVMMLVYQGAEAFRIWTGVEPPVDIMKRAVL 268
>gi|427711504|ref|YP_007060128.1| shikimate dehydrogenase [Synechococcus sp. PCC 6312]
gi|427375633|gb|AFY59585.1| shikimate dehydrogenase [Synechococcus sp. PCC 6312]
Length = 290
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 31/300 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I T++ G+I PV HS P++HN + + +Y+P + DL+ S
Sbjct: 3 IRGTTQLLGVIGYPVKHSLSPVIHNAALESLELDYVYLPFSIAPGDLETALSGMLVIGVQ 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P+K+A++ V PL + AVNT+ R G IG NTD + ++
Sbjct: 63 GFNITIPHKQAIIPCLKSVSPLVDQVGAVNTVKRE--AGAWIGTNTDVAGFLAPLQAL-- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+ N T +L G GGA RA+ G A + + D + ++ +
Sbjct: 119 NLNWSNQTG-----------LLLGCGGAARAVVVACWQLGLAELTVSGRDLAKLQAFQAS 167
Query: 411 VMGAARPFEDILNFQPEKG--------AILANATPLGMHPNTDRVPVSEETLRDY---QL 459
P L P +G A++ N+TPLGM P + P++ + L +
Sbjct: 168 WQDILPP--GFLKVVPWEGWAKELAAAALVVNSTPLGMAPEMNHSPLAPKDLDQLPASAI 225
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
++D +YTP T+LL + G + G+EM ++Q F + G+ AP + MR A+
Sbjct: 226 IYDLIYTPNPTQLLAWGQERGLKTIDGLEMLIQQGAAAFQWWLGQPAPVDVMRAQAWARL 285
>gi|398890972|ref|ZP_10644441.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM55]
gi|398187570|gb|EJM74907.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM55]
Length = 271
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 22/262 (8%)
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN + + + +V V+D + + G +V PYK VM D + AQ
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTVVMPHLDRIDESAQ 82
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNTI DG L GYNTD ++ A+++ + L+ + + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEV--------------TELSDKRIAVIG 126
Query: 376 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 435
AGGA RA+ +G A V +F+ FER +LA D+ AR + F + I+ NA
Sbjct: 127 AGGAARAVVYGCLQEAAEVTVFNRSFERGAALAEDL--GARWGGSVEMFTAKTFDIVINA 184
Query: 436 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
T +G P+++ + + L + +V D + P +T LL A+A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLASHLIVMDVAFMPVQTALLLQAKALGCSTVAGTRMLVHQA 241
Query: 495 IGQFNLFTGKEAPKEFMREIVL 516
Q L+TGK+AP + M + +L
Sbjct: 242 CRQIELYTGKDAPIDIMEQAML 263
>gi|389640335|ref|XP_003717800.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|374095368|sp|A4RD09.2|ARO1_MAGO7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|351640353|gb|EHA48216.1| pentafunctional AROM polypeptide [Magnaporthe oryzae 70-15]
gi|440466367|gb|ELQ35639.1| pentafunctional AROM polypeptide [Magnaporthe oryzae Y34]
gi|440487854|gb|ELQ67619.1| pentafunctional AROM polypeptide [Magnaporthe oryzae P131]
Length = 1590
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 218/500 (43%), Gaps = 52/500 (10%)
Query: 36 GADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92
G+D VE+R+D + + P + + ++ + +P++ R GG + +H AL+
Sbjct: 1089 GSDAVELRVDLLQDHSPEFVVRQVALLRSLCKMPIIFTVRTVSQGGRFPDADHAGALALY 1148
Query: 93 -LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQA 151
+A +G +YVD E+ + +++ + + + T I S + T S + ++ +A
Sbjct: 1149 RVALRMGVEYVDVEMTMPEDVI-ETVTKAKGYTSIIASHHDPKGTLSWRNGAWMQYYNKA 1207
Query: 152 TG-ADIIKLV-FSVNDITEIA----RIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGA 205
D+IKLV + D + + L +H PIIA ++GE+G +S++L+ F
Sbjct: 1208 LHYGDVIKLVGWCRTDEDNFSLLTFKTRMLAAHESTPIIALNMGEQGKLSRVLN-GFMTP 1266
Query: 206 LVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVN 265
+ + +L G T +RQ + + F L KP+ S+ PILHN F+
Sbjct: 1267 VTHAALPAAAAPGQLTAAEIRQALSLLS-KIPKRKFYLFGKPISKSRSPILHNTLFQQTG 1325
Query: 266 YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325
Y + D + + +T + DF G SV P K +M DE+ A+ I AVNTII
Sbjct: 1326 LPHTYSRLETDKVAEVETTIRASDFGGASVTIPLKLDIMPMLDEITDAAKTIGAVNTIIP 1385
Query: 326 RPSDG---KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRA 382
P +L G NTD + ++ A T P +G V+ G+GG RA
Sbjct: 1386 VPVQAGKQRLRGDNTDWCGMVHSLRMA-------GVTGKRACPASG---VVVGSGGTTRA 1435
Query: 383 LAFGAKSRG-ARVVIFDIDFERAKSLASD----------------VMGAARPFEDILNFQ 425
F S G + + I + +++AS G ARP E +++
Sbjct: 1436 AIFALHSLGFSPIYIIARNATSVETIASSFPAEYDIRNLQGTLAYTEGMARP-EVVISTI 1494
Query: 426 PEKGAILANATPLGMHPNTDRV---PVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAI 482
P G + G+ D V P+ +++ + YTP T ++ A+ AG
Sbjct: 1495 PATGDV-----DEGILMAVDSVLTLPMGTSNTGAARVLLEMAYTPTFTNMMARAKDAGWG 1549
Query: 483 IVSGVEMFLRQAIGQFNLFT 502
V G E+ Q QF L+T
Sbjct: 1550 TVPGFEVLAAQGWFQFQLWT 1569
>gi|323136819|ref|ZP_08071900.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
gi|322398136|gb|EFY00657.1| shikimate 5-dehydrogenase [Methylocystis sp. ATCC 49242]
Length = 281
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 132/280 (47%), Gaps = 19/280 (6%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPY 299
G++ P+ HS+ P +HN +G+YVP+ ++ L+ + FAG ++ P+
Sbjct: 12 GVMGWPISHSRSPKIHNYWMSQYGIDGVYVPLAIEPGKLEAALRALPALCFAGCNLTIPH 71
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGT 359
KEA + F D + P A I AVN ++ DG+LIG N D I ++ +A + G
Sbjct: 72 KEAALNFLDRIEPAAARIGAVNCVVVG-QDGELIGRNYDGYGFIASLREAAPDWGAARAP 130
Query: 360 ASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARPF 418
V+ GAGG RA+ G GAR + +F+ ERAK+LA+D G R
Sbjct: 131 C-----------VVIGAGGGARAIVSGLIEAGAREIRLFNRTMERAKALAADFGGPVRAC 179
Query: 419 EDILNFQPEKGA-ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
+ GA +L N T GM + +S L LV D VY P +T LL +A
Sbjct: 180 AWQERHEALAGAGLLVNTTSQGM-VGQQPLDLSLAALPATALVADIVYAPLETPLLAEAR 238
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTG--KEAPKEFMREIV 515
GA V G+ M + QA F ++G EA E IV
Sbjct: 239 RMGATAVDGLGMLMHQARPAFRDWSGVMPEATPELRARIV 278
>gi|319934857|ref|ZP_08009302.1| hypothetical protein HMPREF9488_00133 [Coprobacillus sp. 29_1]
gi|319810234|gb|EFW06596.1| hypothetical protein HMPREF9488_00133 [Coprobacillus sp. 29_1]
Length = 423
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 26/296 (8%)
Query: 230 KVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS 287
K I T ++G+++ P+ HS P++HN F+ + + +Y+ V + L + ++ +
Sbjct: 142 KKNRITGYTGLYGIVANPIRHSFSPMMHNTAFQTLGIDDVYLAFEVAENQLSDYITSVKT 201
Query: 288 PDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIE 347
+ GF+V PYK +M + D++ A+ AVNT+ + +GKLIG+ +D + + A E
Sbjct: 202 LNIKGFNVSMPYKLKIMDYLDDLTTEAKLCQAVNTV--KNVNGKLIGHISDGKGFVMACE 259
Query: 348 DAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID-----F 401
ER + + + V+ GAGGA A+ +GA+ +V+++
Sbjct: 260 ----EREWH---------IQNQKIVVLGAGGAACAIIVEMALQGAKEIVVYNRSEKPFIK 306
Query: 402 ERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF 461
E + L D+ + +D L + +L T +GM PN D+ + E L V
Sbjct: 307 ELNQKLNCDIHLKSLSNKDELKQDLKDAYLLVQTTNVGMSPNVDQCLIDESYLSHQLKVA 366
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
D +Y P +T+LLK AE G ++G M L Q F +TG++ P ++E+ +A
Sbjct: 367 DIIYKPAQTKLLKMAERLGLEYMNGEGMILYQGAVSFEFWTGQKMP---IKEVKIA 419
>gi|118575407|ref|YP_875150.1| shikimate 5-dehydrogenase [Cenarchaeum symbiosum A]
gi|118193928|gb|ABK76846.1| shikimate 5-dehydrogenase [Cenarchaeum symbiosum A]
Length = 268
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 30/287 (10%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYK 300
+I P+ HS P LHN F + + Y+ + +L++ + GF+V P+K
Sbjct: 1 MIGDPINHSLSPTLHNAAFMELGMDCTYIAYRIPRGELEEGIGSLKDTGVEGFNVTIPHK 60
Query: 301 EAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTA 360
AVMK+ D + A NT+ + DG L GYNTD + D IK+RG
Sbjct: 61 VAVMKYMDRLDETCSMAGAANTVSIK--DGVLKGYNTD----MGGFLDPIKKRGIG---- 110
Query: 361 SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER--------AKSLASDVM 412
+ G ++ GAGGA RA+ GAR + ++ A+ L +D +
Sbjct: 111 -----IEGTEALVLGAGGAARAVTVALAGEGARRITIANRTQQGAREIALLARRLGADAV 165
Query: 413 GAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
A ED+ + + N TP+GM VP EE+++D +V+D VY P +T +
Sbjct: 166 PA--DLEDVGRLA-RRSKFIVNCTPVGMGGEPSLVP--EESIQDTSVVYDIVYMPLETDM 220
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+K A+A A+ + G EM L QA F ++ EAP + M+++++
Sbjct: 221 IKKAKARNAVYIRGFEMLLGQACRAFEIWHEVEAPYKAMKQMMVGDL 267
>gi|453086579|gb|EMF14621.1| Pentafunctional AroM protein [Mycosphaerella populorum SO2202]
Length = 1559
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 232/546 (42%), Gaps = 65/546 (11%)
Query: 17 LMAQSVEQVLSNMYQAKAEGADVVEIRLDCI---------NNFQPG---KDLEIILTKKP 64
L + +++Q++ + + G+D +E+R+D + +++PG + + ++
Sbjct: 1034 LTSPTIQQIVPILPEVTM-GSDAIELRVDLLVDPDKEPGETHWRPGFLSEQVALLRASTT 1092
Query: 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL--GADYVDFELKVASNILGKQYS-SHQ 121
LP++ R GG + + ++ AL+ AE L G D+VD EL A + K+Y SH+
Sbjct: 1093 LPLIFTLRSVSQGGQFPDEATEQAIALY-AEGLRMGFDFVDLELTAAPEL--KEYVLSHR 1149
Query: 122 SGTRFIVSCN-----LDCETPSEEDLGYLVSRMQATGADIIKLV-----FSVNDITEIAR 171
I S + L +EE + + Q DI+KL+ ND + +
Sbjct: 1150 KMCTIISSHHDPKGQLSWADGAEEWRAHFDAARQY--GDIVKLIGVAKDSDANDDLKAFK 1207
Query: 172 IFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV 231
+P+IA ++GE G +S++ NG + S PV P S + KV
Sbjct: 1208 KTVAKEFPHLPVIAMNMGELGKMSRVT----NGFMTPVSHPALPVKAAPGQVSAAEIRKV 1263
Query: 232 EHINAD--TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD 289
I + K F L KPV S+ P LHN F IY D SP+
Sbjct: 1264 LGIVGEIPAKKFYLFGKPVQQSRSPALHNTLFNLTGLPHIYGTHETDQASSAADIIRSPE 1323
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTII-RRPSDGK--LIGYNTDCEASITAI 346
F G SV P K +M D + P AQ I AVNTI+ + S GK L+G+NTD + + A+
Sbjct: 1324 FGGASVTIPLKLDIMPLLDAIDPAAQTIGAVNTIVPTKSSSGKNMLVGHNTDWQGMVLAL 1383
Query: 347 EDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKS 406
+A G S + ++ ++ G GG RA + K+ G + R K+
Sbjct: 1384 RNA--------GAQSTPAAVSREAGMVVGGGGTARAAIYALKNMGYSPIYL---LGRNKT 1432
Query: 407 -LASDVMGAARPFEDILNFQPEKG--AILANATPLGMHPNTDRVPVSEETLRDY------ 457
LA + L PE+ + +G P + + E++
Sbjct: 1433 KLAQLTASFPAEYNITLLSSPEEARQVAVPPVVAVGTIPGDLPIDTTLESILQTVFAQSA 1492
Query: 458 -----QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+++ + Y P T+L++ AE +G V G+E + Q + QF L+T E R
Sbjct: 1493 ATTRSKVLLEMAYKPAVTQLMELAEKSGWNTVPGLEALVAQGVHQFKLWTDIMPLYEVSR 1552
Query: 513 EIVLAK 518
VL +
Sbjct: 1553 NAVLGR 1558
>gi|150005076|ref|YP_001299820.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|294778884|ref|ZP_06744300.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|319642584|ref|ZP_07997231.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345520174|ref|ZP_08799574.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423311983|ref|ZP_17289920.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
gi|149933500|gb|ABR40198.1| shikimate 5-dehydrogenase [Bacteroides vulgatus ATCC 8482]
gi|254836003|gb|EET16312.1| shikimate 5-dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294447193|gb|EFG15777.1| putative shikimate 5-dehydrogenase [Bacteroides vulgatus PC510]
gi|317385818|gb|EFV66750.1| shikimate 5-dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392689362|gb|EIY82640.1| shikimate 5-dehydrogenase [Bacteroides vulgatus CL09T03C04]
Length = 246
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 28/268 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGF 297
K +GLI P+GHS N F N + YV + +K+ S ++PD G +V
Sbjct: 2 KKYGLIGYPLGHSFSKNFFNEKFHSENIDAEYVNFEIPSIKELPSVLLANPDLVGLNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNT--IIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A AI AVN I+R+ +LIGYN+D +IE ++
Sbjct: 62 PYKEQVISYLDELDKDAAAIGAVNVIKIVRQKGKTRLIGYNSDVIGFTQSIEPLLE---- 117
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
P + +L G GGA +A+A+G K G +++L +++
Sbjct: 118 ---------PQHKKALIL-GTGGASKAIAYGLKKLGLECKFV------SRNLREEMLTYD 161
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 474
+ +I+ ++ ++ N TP+GM+P D P + + L L++D +Y P T +K
Sbjct: 162 QLTPEIM----DEYKVVVNCTPVGMYPRADEYPNIPYQYLTPNHLLYDLLYNPDTTLFMK 217
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
GAI +G+EM L QA G ++++
Sbjct: 218 KGADKGAITKNGLEMLLLQAFGAWDIWN 245
>gi|402312231|ref|ZP_10831161.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
gi|400370892|gb|EJP23874.1| shikimate dehydrogenase [Lachnospiraceae bacterium ICM7]
Length = 289
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 24/290 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV-DDLKKFFSTYSSPDFAG 292
I+ADTKV+G+I PV HS PIL N + +N + Y V +++K+ + D G
Sbjct: 2 ISADTKVYGIIGNPVSHSLSPILQNTLAKEMNIDMSYSAFHVTENIKEAIKGAFALDIKG 61
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
F+V PYK+ ++ ++ A+ I A+NT+I+ K GYNTD ++
Sbjct: 62 FNVTIPYKKDMLDIVSDIDERAKKIGAINTLIKTEKGYK--GYNTDIIGLGMSL------ 113
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDV 411
Y N + + G+ ++ GAGGA +A+ + A G + + + + + +AK L ++V
Sbjct: 114 --YNNSLS-----IKGKDIIILGAGGAAKAVLYLAIEEGVKSITLVNRNISKAKELRAEV 166
Query: 412 ------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-QLVFDAV 464
+ + + +N + + T +GMHPN + + EE + D +
Sbjct: 167 GIKDISVISLDDLKSNINLLDKDNYFVFQTTNVGMHPNVEDCIIEEEAFYEKCNSGIDLI 226
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
YTP +T +K ++ G I ++G++M + Q + F ++ + K+ + ++
Sbjct: 227 YTPFETTFIKKMKSKGKICINGLDMLILQGVASFEIWNNIKVKKDTIEKV 276
>gi|424812401|ref|ZP_18237641.1| shikimate 5-dehydrogenase [Candidatus Nanosalinarum sp. J07AB56]
gi|339756623|gb|EGQ40206.1| shikimate 5-dehydrogenase [Candidatus Nanosalinarum sp. J07AB56]
Length = 245
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 23/257 (8%)
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN + + Y+ + +D+++ + + +F G SV P+ + ++ D + +
Sbjct: 1 MHNAGYEAKELDYTYIAIGAEDIREVLGSVQNLEFKGLSVSMPFNQEIVSLLDNTNDDVE 60
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I A NT++ DG+ GYNTD +I A+++ S L + G
Sbjct: 61 TIGACNTVV--IEDGETTGYNTDWRGAINALKET--------------SELDVEKAEIIG 104
Query: 376 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA-ILAN 434
+GG RA+A+G K V I E+ K L D+ A E L Q E GA ++ N
Sbjct: 105 SGGVARAIAYGLKKEQIEVHISARSEEQRKELVQDLNLAG---EINLEGQGEAGAELVVN 161
Query: 435 ATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
ATP+ P + PV E + + + D V+T +T ++++AE G G M L QA
Sbjct: 162 ATPVAQQPGS---PVELEKHENGEWLLDVVFTELQTDIIQEAEGKGWNTTKGWRMLLHQA 218
Query: 495 IGQFNLFTGKEAPKEFM 511
+ QF L+TG+E P E M
Sbjct: 219 LKQFELYTGEEPPTEEM 235
>gi|373859362|ref|ZP_09602091.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
gi|372450861|gb|EHP24343.1| shikimate 5-dehydrogenase [Bacillus sp. 1NLA3E]
Length = 292
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 146/299 (48%), Gaps = 33/299 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDF 290
I+ TK+ GL++ P+GHS P +HN + R + N Y+ V + L + + +
Sbjct: 6 RIDGRTKLLGLLATPIGHSLSPAMHNMSLRKLGLNYAYMAFEVGNAQLADVVTGMRALNV 65
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ DE+ P AQ AVNT++ DGKLIG+ TD
Sbjct: 66 RGFNVSMPNKTKILPLLDELSPAAQFAGAVNTVVNE--DGKLIGHITDG----------- 112
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID---FERAKS 406
GY G G + G+ L GAGGA A+A A G A + IF+ D F RA+
Sbjct: 113 --TGYMRGLKEAGIDVIGKKITLLGAGGAATAIAIQAALDGVAEISIFNRDDEFFARAEK 170
Query: 407 ----LASDVMG-----AARPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-L 454
+ ++ G ED+ + E + IL NAT +GM P + + + L
Sbjct: 171 NVQIINEEIKGINCKATVYRLEDVETLKAEIASSDILTNATGVGMKPLEGESLIQDASWL 230
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
R +V D VY PRKT+LL AE G ++G+ M L Q F ++TG+E P E+++E
Sbjct: 231 RPELIVSDVVYIPRKTKLLAMAETVGCQTLNGLGMMLWQGAKAFEIWTGQEMPVEYVKE 289
>gi|388854816|emb|CCF51497.1| probable ARO1-Pentafunctional AROM polypeptide [Ustilago hordei]
Length = 1708
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 232/537 (43%), Gaps = 78/537 (14%)
Query: 29 MYQAKAEGADVVEIRLDCIN-NFQP------------GKDLEIILTKKPLPVLIVYRPKW 75
+ ++ GAD +E R D +N + QP L + + LP++ R
Sbjct: 1181 LIRSMESGADALEFRADLLNPSGQPVTTPQVPPNDFVRNQLAALRHRTSLPIVFTVRTHS 1240
Query: 76 AGGLYEGDEHKR-LEALHLAEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSC 130
GG++ + K + + LA G +Y+D EL + + ++ + +S + S
Sbjct: 1241 QGGMFPDNHQKEYFDLISLALRHGCEYIDLELGFDDSLLTAVVEAKANSQIIASHHDWSG 1300
Query: 131 NLDCETPSEEDLGYLVSRMQATG--ADIIKLVFSVNDITEIARIFQLLSHCQV-PIIAYS 187
NLD E+ + + +R G A II S+ D + R +S P++A +
Sbjct: 1301 NLDWES---DTTAAIYTRACQFGDIAKIIGKANSMEDNYSLERFRAKVSASATKPLLAVN 1357
Query: 188 VGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLIS 245
+G G S++++P F + + ++ PV P + RQ + T F L
Sbjct: 1358 MGAAGQFSRVVNPVFT-PITHETM---PVKAAPGQLTFRQIQTALALIGQTTALKFALFG 1413
Query: 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPYKEAVM 304
P+ HS P+LHN F + Y ++ + Y S DF G SV P+K A++
Sbjct: 1414 SPISHSLSPVLHNTAFGALGLPHHYELFETAEVDDAIAAYVRSGDFGGASVTIPHKLAII 1473
Query: 305 KFCDEVHPLAQAIAAVNTIIR-RPSDGK---LIGYNTDCEASITAIEDAIKERGYKNGTA 360
K+ D+V A+AI AVNT+I R ++GK L+G NTD A T +++ T
Sbjct: 1474 KYLDQVSDEAKAIGAVNTVIPIRDAEGKVTALLGDNTDWIAIETLARRSLR-------TV 1526
Query: 361 SFGSP-LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAARPF 418
P L G ++ GAGG+ RA F G ++++F+ A++LA V P
Sbjct: 1527 HLADPNLTG---LVIGAGGSARAALFALYRLGVKKILLFNRTLANAENLAKQV-----PV 1578
Query: 419 E---DILNFQPEKGAILANATP-----------LGMHPNTD---RVPVSEETLRDYQLVF 461
E +L E G++ A P + PN +PV +V
Sbjct: 1579 EWNVQVLTSLDEIGSLPAELAPSVVVSNIPAEGATLDPNAQGLIHLPVGILKNPAGGVVI 1638
Query: 462 DAVYTPRKTRLLKDAE------AAGAIIVS---GVEMFLRQAIGQFNLFTGKEAPKE 509
D Y P T LL+ A+ AAG + S G+ + L Q QF ++G+EAP+E
Sbjct: 1639 DMSYRPYSTSLLQLAQQVNTAVAAGKKLWSAIPGITILLEQGCHQFLRWSGREAPRE 1695
>gi|389577330|ref|ZP_10167358.1| shikimate 5-dehydrogenase [Eubacterium cellulosolvens 6]
gi|389312815|gb|EIM57748.1| shikimate 5-dehydrogenase [Eubacterium cellulosolvens 6]
Length = 289
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 144/298 (48%), Gaps = 31/298 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
+ I T + GL+ PV HS P++HN +FRH+ + +Y+ V DLK+ +
Sbjct: 3 DSITGRTGLTGLLGSPVSHSLSPMMHNDSFRHLGLDYVYLCFDVGEKDLKEAVNGLKICG 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
GF++ P K + + D + P A I AVNT++ +G+L G+NTD
Sbjct: 63 IRGFNLTMPDKNRMTELADSLSPAAALIGAVNTVVN--DNGRLTGHNTD----------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID----FERA 404
G+ A +G G+ L GAGGA A+A A G + IF +R
Sbjct: 110 --GIGFMRSLADYGFSPKGKKVTLLGAGGASTAIAAQAALDGVEELTIFARPQSRFHDRT 167
Query: 405 KSLASDV--MGAAR-PFEDILNFQPEKG-----AILANATPLGMHPNTDRVPVSEETLRD 456
L D+ A R ED+ + + ++L N TP+GM P+TD +++ ++
Sbjct: 168 LRLVEDINRQTACRCSLEDLADTSTLRATLADSSLLVNGTPVGMAPDTDACLINDTSMFH 227
Query: 457 YQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
L V D +Y PR+TRLL+ A+ AG +G+ M L Q F L+TG+E P ++E
Sbjct: 228 EDLFVSDIIYNPRETRLLRMAKEAGCRTSNGLFMLLYQGAEAFRLWTGQEMPVSIIKE 285
>gi|242238828|ref|YP_002987009.1| quinate/shikimate dehydrogenase [Dickeya dadantii Ech703]
gi|242130885|gb|ACS85187.1| Shikimate dehydrogenase substrate binding domain protein [Dickeya
dadantii Ech703]
Length = 289
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 138/306 (45%), Gaps = 52/306 (16%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNP---------TFRHVNYNGIYVPMFVDDLKKFFST 284
+ A ++ GL++ P+ HS P + N T+ + PM ++ LK
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALDKEGLPYTYMAFEVDNESFPMAIEGLKAL--- 59
Query: 285 YSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASIT 344
G V P K+ ++ DE+ P A+ + A+NTI+ +G L GYNTD I
Sbjct: 60 ----KMRGTGVSMPNKQLACEYVDELTPAARLVGAINTIVN--DNGYLKGYNTDGTGHIR 113
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DID 400
AI KE G+ + G+ VL GAGGA A+ A G + + D
Sbjct: 114 AI----KESGFD---------IKGKTMVLVGAGGASTAIGAQAAIEGIKAIKLFNRKDEF 160
Query: 401 FERAKSLASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP 448
+E+A A V +G + F D + IL N T LGM P + P
Sbjct: 161 YEKALDFAKRVNENTDCTVTVHDLGDQQAFADAI----ATADILTNGTKLGMKPLENESP 216
Query: 449 VSEET-LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
V+++T LR LV + VY P T+LL+ A+ G V G M L Q QF L+TGK+ P
Sbjct: 217 VTDKTMLRPELLVTECVYNPHITKLLQMAQDVGCKTVDGYGMLLWQGAEQFKLWTGKDFP 276
Query: 508 KEFMRE 513
E+++E
Sbjct: 277 LEYIKE 282
>gi|327302676|ref|XP_003236030.1| 3-dehydroquinate synthase [Trichophyton rubrum CBS 118892]
gi|326461372|gb|EGD86825.1| 3-dehydroquinate synthase [Trichophyton rubrum CBS 118892]
Length = 1570
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 222/511 (43%), Gaps = 56/511 (10%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ Q + G+ VE+R+D + + + + + ++ LP++ R K G
Sbjct: 1066 NILQRASFGSHAVELRVDLLKDPTSTSAIPSINYVAEQISFLRSQVSLPLIFTIRTKAQG 1125
Query: 78 GLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + L+ LA +G+D++D E+ N+L + G I++ + D
Sbjct: 1126 GLFPDNAVDEALGLYKLAIRMGSDFIDLEISFPDNLL--HAVTEIKGYSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IKL+ + + + Q + + +P+IA ++G
Sbjct: 1184 QLSWSNGSWIQYYNKALQYGDVIKLIGVAESLDDNLALQQFKAWAERSYPIPMIAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGH 250
+G +S++L+ +F + + +L G + + +RQ + D K F L KP+
Sbjct: 1244 KGRLSRILN-RFMTPVSHPALPFKAAPGQLSAKEIRQALTLMG-ELDAKEFALFGKPISA 1301
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
S+ P LHN F + Y + D+++ + S +F G SV P KE +M+ DE+
Sbjct: 1302 SRSPALHNTLFAEAGFPHEYGRLETDNVEDVKESIYSEEFGGASVTIPLKERIMELLDEI 1361
Query: 311 HPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPL 366
P A+ I AVNTI+ +G KL+GYNTD + ++DA G
Sbjct: 1362 SPEAKIIGAVNTIVPIVEEGKATRKLVGYNTDWQGMARCLKDA--------GAIYLKK-- 1411
Query: 367 AGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA--ARPFEDILN 423
G + G+GG RA + S G + + + LAS + EDI +
Sbjct: 1412 -GESALTIGSGGTARAAIYSLHSMGYSPIYLVGRTPANLTKLASSFPAEYNVQVVEDIKS 1470
Query: 424 FQ--PEKGAILANATPLGMHPNTDRVPVSE---ETLRDYQ------LVFDAVYTPRKTRL 472
Q P+ +A +T G ++ P+ E ++D Q ++ D Y P T +
Sbjct: 1471 IQTFPK----VAISTIPGDQEISE--PLQELIALIMKDGQESSEKCIILDMAYKPDVTAI 1524
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+ AG IV G+E+ + Q + QF +TG
Sbjct: 1525 AQLVSPAGWKIVKGLEVLVAQGVYQFEHWTG 1555
>gi|410456866|ref|ZP_11310717.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
gi|409927248|gb|EKN64391.1| shikimate 5-dehydrogenase [Bacillus bataviensis LMG 21833]
Length = 277
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVG 296
K++ ++ P+GHS P++ N F + Y+P V +DL + GF+V
Sbjct: 3 KLYAVLGDPIGHSMSPVMLNDLFSFYQIDAHYLPFQVKTEDLGDAVKGLRAIGVGGFNVT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K ++ F D V LA +I AVNT++ GKLIGYNTD G+
Sbjct: 63 IPHKSTIIPFLDVVDELALSIGAVNTVVN--DGGKLIGYNTDGP-------------GFL 107
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD----V 411
+ ++G+ ++ GAGGA R + F AK + + I + ERA +L +D +
Sbjct: 108 RSLNPYVPSVSGQRILVIGAGGAARGIYFAMAKEKPLVIDIANRTLERAVNLIADCPYDI 167
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
A ++ E I+ T +GM P P++ + L +V D +Y P +T+
Sbjct: 168 SSKALSLQEASEIIGEYDLII-QTTMIGMSPRMADQPLNLDNLAKQSIVCDIIYNPLETQ 226
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
LL+DA + GA +GV+MF+ Q F +TG E MR VL +
Sbjct: 227 LLQDAASKGARTQTGVDMFVYQGALAFEKWTGIFPDVERMRNNVLLQL 274
>gi|260886325|ref|ZP_05897588.1| shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
gi|260864044|gb|EEX78544.1| shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
Length = 311
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSV 295
TK +I P+GHS P + N R V + YV P+ + L+ + F GF+V
Sbjct: 21 TKNLAVIGSPIGHSLSPAMQNAAIRAVGLDYAYVALPVLPERLEDGVRGLRALGFRGFNV 80
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K A++ DEV A+AI AVNT++ G+L G+NTD E G+
Sbjct: 81 TIPHKSAILPLLDEVDEAARAIGAVNTVV--CEAGRLKGFNTDVE-------------GF 125
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASDV--- 411
A+ G + G+ VL GAGGA RA +G GA V + + +A+SLA +
Sbjct: 126 LGALAARGFSVEGKRVVLLGAGGAARAALYGLLRSGAAEVTLGVRNAPKARSLAEEFAQY 185
Query: 412 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPR 468
+ A E K A++ N TPLGM P T +P V + + + +D +YTP
Sbjct: 186 GEVCALDWNEAAFEEAVRKAALVVNTTPLGMAPQTQAMPPVPWQAVHERTFFYDIIYTPA 245
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA 506
KT+ L+ AE+ G ++G M + Q F L+TG+EA
Sbjct: 246 KTQFLQRAESLGCPTLNGEAMLVGQGAAAFRLWTGREA 283
>gi|148243617|ref|YP_001228774.1| shikimate dehydrogenase [Synechococcus sp. RCC307]
gi|147851927|emb|CAK29421.1| Shikimate dehydrogenase [Synechococcus sp. RCC307]
Length = 298
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 27/283 (9%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
INA T++ G+I +P+ HS P++HN + N Y+ V D L++ ++
Sbjct: 9 INASTELLGVIGQPIHHSLSPVMHNAAIAELGLNWRYLAFAVAPDRLQQAIEGLAAMGCR 68
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G SV P+KE V V +A+ + AVN +I G G NTD +T + ++
Sbjct: 69 GLSVTIPHKETVQPLLSSVDAVARELGAVNCLIPD-GQGGWRGTNTDWSGFLTPLSGRLQ 127
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
E G+ +L G+GG RA+ G +VV+ + + ++LA D
Sbjct: 128 E--------------GGQALIL-GSGGVVRAVLRSCCELGIEQVVLRGRNRSKLEALAED 172
Query: 411 VMGAARPF-----EDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLR---DYQLVFD 462
V A P ++ L E+ ++ N TPLGM D+ P+S + L +V+D
Sbjct: 173 VRNWAPPLLLSSGDEPLEPLLERSNLVVNGTPLGMAEMRDQTPLSAQQLSLLPASAVVYD 232
Query: 463 AVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
VYTPR T LLK A G + G+EM ++Q L+TG E
Sbjct: 233 VVYTPRPTLLLKLAAQRGLSVFDGLEMLVQQGAAALKLWTGLE 275
>gi|397165245|ref|ZP_10488698.1| shikimate / quinate 5-dehydrogenase family protein [Enterobacter
radicincitans DSM 16656]
gi|396093352|gb|EJI90909.1| shikimate / quinate 5-dehydrogenase family protein [Enterobacter
radicincitans DSM 16656]
Length = 288
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 30/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRAL-AFGAKSRGARVVIF---DIDFERAKSL 407
E G+ + G+ VL GAGGA A+ A GA + +F D FE+A +
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDDFFEKAVAF 167
Query: 408 ASDVMGAARPFEDILNFQPEKGA--------ILANATPLGMHPNTDRVPVSE-ETLRDYQ 458
A V + + +K IL N T +GM P D+ +S+ LR
Sbjct: 168 ARRVNENTDCVVTVTDLADQKAFAAALATADILTNGTKIGMKPLDDQSLISDISLLRPGL 227
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
LV + VY P T+LL+ A+ AG + G M L Q QF L+TGKE P E+++ ++
Sbjct: 228 LVTECVYNPHITKLLQQAQQAGCKTIDGYGMLLWQGAEQFKLWTGKEFPLEYVKHVM 284
>gi|307705053|ref|ZP_07641936.1| shikimate dehydrogenase [Streptococcus mitis SK597]
gi|307621401|gb|EFO00455.1| shikimate dehydrogenase [Streptococcus mitis SK597]
Length = 284
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLASDVM 412
SF + G+ L GAGGA +++ A G +++ +F + E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQERIAESDLLVNATSVGMDGQSSPVPESI-VLSETLLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEDIWKSLTEKY 283
>gi|304382673|ref|ZP_07365167.1| shikimate dehydrogenase [Prevotella marshii DSM 16973]
gi|304336298|gb|EFM02540.1| shikimate dehydrogenase [Prevotella marshii DSM 16973]
Length = 248
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 133/271 (49%), Gaps = 32/271 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGF 297
+GLI P+GHS N F + N Y +++L + T+ D G +V
Sbjct: 4 YGLIGYPLGHSFSLDFFNEKFENEGINAQYENFEISSIENLPEIIDTHQ--DLCGLNVTS 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE VM + D + P A++I AVN + I + + L G+NTD +IE I ER +
Sbjct: 62 PYKEQVMSYLDAISPEARSIGAVNVVKVIHKGNKTILRGFNTDAIGFRKSIE-PILERFH 120
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
K ++ G GGA +A+A+G K+ G ID + +D G
Sbjct: 121 KKA-------------LILGTGGAAKAVAYGLKALG-------IDTQYVSR--TDRKGCI 158
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 474
R +E I E+ ++ N TP GM+P+T+ P + E + ++ L++D +Y P +T LK
Sbjct: 159 R-YEQITPETIEEYNVIVNCTPCGMYPHTEEYPKLPYEAMDNHTLLYDLIYNPDETLFLK 217
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
+ G II +G+EM L QA + L+ KE
Sbjct: 218 KGKEQGTIIKNGLEMLLLQAFASWELWNEKE 248
>gi|29840484|ref|NP_829590.1| bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Chlamydophila caviae GPIC]
gi|29834833|gb|AAP05468.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase
[Chlamydophila caviae GPIC]
Length = 477
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 214/501 (42%), Gaps = 59/501 (11%)
Query: 12 MICA----PLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEII-LTKKPLP 66
M+CA P ++ +Q+L ++ D +E+R+DC+ + + ++ L KKP+
Sbjct: 1 MLCATISGPSFFEAKQQLLHSL-----PFVDSIELRIDCLLSLSSDQLKHLVCLAKKPIL 55
Query: 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRF 126
L + L E +R + LA+ L DY+D + L K + + +
Sbjct: 56 TL-----RRHASLSEIAWVER--TMELAK-LQPDYLDIDKDFPKEALRKIRNQYPN---- 103
Query: 127 IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQVPIIAY 186
+ L + + E + L + M A K+ + + R+ Q+ H
Sbjct: 104 -IKIILSYHSQTSEHVPTLYNEMLKQQAHHYKIAITSTKSVDALRLIQIKKHLPENTTVL 162
Query: 187 SVGERGLVSQLLSPKFNGALVYGSLKGTPVL--GLPTVESLRQTYKVEHINADTKVFGLI 244
+G G+ S++LSP A+ Y S P + G ++E L Y +++++ +++GLI
Sbjct: 163 CMGNEGIASRILSPLMKNAINYASGIHAPKVAPGQLSIEDLL-AYNYANLSSEARIYGLI 221
Query: 245 SKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPYKEA 302
P+ S + HN F ++ Y+ + + DLK+FFS F G SV P+K
Sbjct: 222 GNPIDRSISHLSHNKLFSELHMKTSYIKILLSSADLKEFFSLTRDLPFGGLSVTMPFKTD 281
Query: 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASF 362
V+ + D P + + NT++ + K+ G+NTD + + +K +
Sbjct: 282 VLDYIDVFDPSVKHCQSCNTLVF--NKNKITGHNTDG----LGLLNLLKRKNIAVHNTHV 335
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDIL 422
G + G+GGA +A+A GA + IF+ E K LA G A P +
Sbjct: 336 G---------IVGSGGAAKAIATTFAYSGACISIFNRTEENGKKLAELCNGNAFPLSSL- 385
Query: 423 NFQPEKGAILANATPLGMHPNTDRV--PVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAG 480
EK AI L H + PV V D P+++ + A+A G
Sbjct: 386 ---SEKHAIDILILCLPPHVKIPEIFPPV----------VIDINTLPKESPYTRKAKAQG 432
Query: 481 AIIVSGVEMFLRQAIGQFNLF 501
++ G EMF QA+ QF+L+
Sbjct: 433 CHVLYGYEMFAEQALLQFSLW 453
>gi|390453029|ref|ZP_10238557.1| shikimate 5-dehydrogenase [Paenibacillus peoriae KCTC 3763]
Length = 289
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 22/285 (7%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+ G++ P+ HSK P++H + G +VP+ V D L+ + F G +V
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALQVAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K VMK+ DE+ A+ I AVNTI+ +G+L GYNTD + R K
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYV---------RSLKE 123
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAAR 416
T+ L G + GAGGA R + + + V+I + ++A+ LA + +
Sbjct: 124 ETSV---ELKGARIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLAQEWTTESI 180
Query: 417 PFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
P + N + + +L N T +GM P +D +P+ + +V D +Y P +TRL
Sbjct: 181 PVKGYANDEAKNVLATVDVLINTTSVGMSPLSDELPLETSLIPKGIIVSDLIYNPLETRL 240
Query: 473 LKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
L+++ E G I+ G+ MF+ Q F FTG + MR VL
Sbjct: 241 LRESREQRGCIVHGGLGMFVYQGAVAFEYFTGVVPAVDQMRAAVL 285
>gi|374710081|ref|ZP_09714515.1| shikimate 5-dehydrogenase [Sporolactobacillus inulinus CASD]
Length = 295
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 146/308 (47%), Gaps = 38/308 (12%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-FVDDLKKFFSTYSSPD 289
++ IN T+++GL + P HS P++HN +FR N +Y+ DL ++ D
Sbjct: 2 IDTINGHTRLYGLFAHPAKHSLSPLMHNLSFRKRGINAVYLAFDMTGDLGDAVNSIRQFD 61
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G ++ P+K V+ F DE+ P A I AVNTI+ R DG LIG NTD
Sbjct: 62 MGGVNLSMPFKRTVIPFLDELTPTADLIGAVNTIMNR--DGHLIGANTDGT--------- 110
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKS--- 406
G+ A+ G + + GAGGAG ++ S+G + F+R +
Sbjct: 111 ----GFFAHLAANGYATNRKTATVLGAGGAGLSIIAAGASKGLSTIHV---FKRRNASFP 163
Query: 407 LASDVM---GAARPFEDILNFQPEKGAI---------LANATPLGMHPNTDRVPVSE--- 451
SD + AA P L+ ++ A+ L N+T +GM + ++PV+E
Sbjct: 164 AVSDQLRQIAAAYPTTIQLHDYNDEAALQRALSESDFLINSTNIGMGDDA-KLPVAEALI 222
Query: 452 ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
+ L +V DA+Y PR+TR L A+ G I +G+ M + Q F +T +E P + +
Sbjct: 223 DCLSPSAVVCDAIYEPRQTRFLHAAKQHGCITFNGLGMLIYQGAQAFQRWTDQEMPIDDV 282
Query: 512 REIVLAKF 519
+ +L +
Sbjct: 283 EDALLKEL 290
>gi|224024792|ref|ZP_03643158.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
gi|224018019|gb|EEF76026.1| hypothetical protein BACCOPRO_01520 [Bacteroides coprophilus DSM
18228]
Length = 249
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSS-PDFAGFSVGF 297
K FGLI P+GHS N F N + YV + ++ F ++ P+ AG +V
Sbjct: 2 KKFGLIGFPLGHSFSKNFFNEKFHSENIDAEYVNFEIPTIEDFPKVLAANPNLAGLNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+AI AVN I ++ KLIGYN+D +IE ++
Sbjct: 62 PYKEKVIPYLDELDKDAEAIGAVNVIKLVQTKGKRKLIGYNSDLLGFTQSIEPLLE---- 117
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
P + +L G GGA +A+ G + G + R++ A+ V
Sbjct: 118 ---------PFHKKALIL-GTGGASKAINHGLQQLGLETLFVS----RSRHDANTVT--- 160
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 474
+E++ + ++ N TP+GM+P D+ P + E L L++D +Y P T +K
Sbjct: 161 --YEELTPEIMAEYKVIVNCTPVGMYPQADKCPEIPYECLTPQHLLYDLLYNPDTTLFMK 218
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFT 502
GA++ +G+EM L QA G ++++
Sbjct: 219 KGSDQGAVVKNGLEMLLLQAFGSWDIWN 246
>gi|417941019|ref|ZP_12584306.1| shikimate dehydrogenase [Streptococcus oralis SK313]
gi|343388312|gb|EGV00898.1| shikimate dehydrogenase [Streptococcus oralis SK313]
Length = 284
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 143/307 (46%), Gaps = 55/307 (17%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 414
SF ++ + + GAGGA +++ A G +++ +F + S M
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGASKSILVQAILDGVSQISVF---------VRSTSMEK 160
Query: 415 ARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVS---EE 452
RP+ ED+ Q + +L NAT +GM + VP S E
Sbjct: 161 TRPYLDKLQEQTGFKVDLYALEDVSELQSRIAESDLLVNATSVGMDGKSSPVPESIVLPE 220
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
TL LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E +
Sbjct: 221 TL----LVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIW 276
Query: 513 EIVLAKF 519
+ + K+
Sbjct: 277 QSLTEKY 283
>gi|347532892|ref|YP_004839655.1| shikimate 5-dehydrogenase [Roseburia hominis A2-183]
gi|345503040|gb|AEN97723.1| shikimate 5-dehydrogenase [Roseburia hominis A2-183]
Length = 289
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVP--MFVDDLKKFFSTYSSPDF 290
I+ T + LI PVGHS P ++N +F + + +YV + V+++ + +
Sbjct: 4 RISGHTGLLALIGSPVGHSGSPAMYNYSFERLGLDYVYVAFDIKVEEVADAIAAMRTFKM 63
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G +V P K V+K+ DE+ P AQ I AVNTI+ +G+L G+ TD E
Sbjct: 64 RGCNVTMPCKTEVVKYMDELSPAAQIIGAVNTIVN--DNGRLTGHITDGE---------- 111
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID---FERAKS 406
G+ + + G + G+ +AG GGA A+ GAR + IF+I FER
Sbjct: 112 ---GFVHNLKNHGIDIKGKKITVAGGGGAATAIQVQCALDGAREISIFNIKDAFFERTLK 168
Query: 407 LASDVMGAA-------RPFEDILNFQPEKGA--ILANATPLGMHPNTDRVPVSEET-LRD 456
A + A D E + I ANAT +GM P + V + + R
Sbjct: 169 TAEKIRAAVPSCVVNVYDIADTARMTAEIASSDIFANATIVGMKPMENESVVKDTSAFRP 228
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
+V DAVY P +TRLL++A+ AGA + G M L Q + F L+TGK+ P E ++E
Sbjct: 229 GLVVADAVYNPEETRLLREAKEAGATCIGGKGMLLWQGVAAFKLYTGKDMPVEEVKE 285
>gi|392576505|gb|EIW69636.1| hypothetical protein TREMEDRAFT_44120 [Tremella mesenterica DSM 1558]
Length = 1595
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 222/525 (42%), Gaps = 71/525 (13%)
Query: 35 EGADVVEIRLDCINNFQP-------------GKDLEIILTKKPLPVLIVYRPKWAGGLYE 81
EGAD +E+R D +N G+ L ++ LP++ R K GG +
Sbjct: 1094 EGADAIELRADLLNPTGQVVNAPSIPSLEYVGRQLSLLRLVTNLPIVYSVRSKEQGGFFP 1153
Query: 82 GDEHKRLE-ALHLAEDLGADYVDFELK----VASNILGKQYSSHQSGTRFIVSCNLDCET 136
D+ E + L +YVD E+ V +I+ + SH + S ++ +
Sbjct: 1154 SDQPDAYEETVILGLRSACEYVDMEVAWPVPVMDSIVSHRGQSHIIASWHDWSGSMKWSS 1213
Query: 137 PSEEDLGYLVSRMQATGADIIKLVFSV---NDITEIARIFQLLSHCQVPIIAYSVGERGL 193
E Y+ A DI+K+V + +D +++ LS P++A ++GE G
Sbjct: 1214 -HEVRNKYIEC---AKYGDIVKIVGTAKTSSDNSQLQLFVSSLSPNSKPLLAINMGELGQ 1269
Query: 194 VSQL----LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINA--DTKVFGLISKP 247
+S++ L+P + L P P S+++ H+ +K F + P
Sbjct: 1270 LSRITNLILTPITHPLL--------PSRAAPGQLSVKEILLARHLIGMLPSKKFYIAGSP 1321
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVM 304
+ HS P LHN F+ Y +Y + +DD +F S + G S+ P K +M
Sbjct: 1322 ISHSMSPTLHNAAFKACGYPHVYTRLEAATIDD--EFLEILHSDETGGMSITMPLKLLIM 1379
Query: 305 KFCDEVHPLAQAIAAVNTIIRRPSDGK--LIGYNTDCEASITAIEDAIKERGYKNGTASF 362
D V P A+ + AVNT+I +GK L G NTD +A A + K
Sbjct: 1380 DHLDSVSPDARLLGAVNTVIPSIRNGKRWLHGENTDWQAIYEAASTNLPSSSSKQ----- 1434
Query: 363 GSPLAGRMFVLAGAGGAGRALAFGAK-SRGARVVIFDIDFERAKSLASDVMGAARPFE-- 419
L G ++ GAGG RA S+ R+ +++ A+ + S + F
Sbjct: 1435 --TLEG---LVIGAGGTCRAALMALHTSKAKRIYLYNRTLSNAEKVKSSF---PKEFNIE 1486
Query: 420 -----DILNFQPEKGAILANATP---LGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
I++ +K ++ + P L + + +SE + + D Y PRKT
Sbjct: 1487 IIDDLSIISHLDQKPQVIISTVPGESLTLKEGQG-IYLSESIFGEEGVAIDLAYKPRKTA 1545
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
L++ AE G VSG+E+ Q Q L+ GK+APK+ + E V+
Sbjct: 1546 LIQLAEKKGWKAVSGIEILCLQGYKQHELWMGKKAPKKKIYEGVM 1590
>gi|445059505|ref|YP_007384909.1| shikimate 5-dehydrogenase [Staphylococcus warneri SG1]
gi|443425562|gb|AGC90465.1| shikimate 5-dehydrogenase [Staphylococcus warneri SG1]
Length = 269
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 136/288 (47%), Gaps = 34/288 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
F +I P+ HS P++HN F ++ Y + VP +++ K GF++
Sbjct: 3 FAVIGDPISHSLSPLMHNKNFESLDLKFTYEAVNVP--IENFKHIREIIEEKHLDGFNIT 60
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++ + DE+ + ++ AVNT++ R DGK IGYNTD GY
Sbjct: 61 IPHKERIIPYLDEIDAQSSSVGAVNTVLIR--DGKWIGYNTDG-------------IGYV 105
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDV---- 411
G + L ++ GAGGA + +A K ++ + + +R ++ +V
Sbjct: 106 TGLKQVYNDLENAYILILGAGGASKGIANELIKFVNTKLTVANRTMKRFETWDLEVNQIS 165
Query: 412 MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
+ A D + I+ N TP GM N D +P+ + L LV D VY P KT
Sbjct: 166 LEQAESHLDEFD-------IIINTTPAGMDDNQD-IPIDLKYLNPETLVSDIVYIPYKTP 217
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+L AE G I +G++MF+ Q F ++TG +A + M++ VL K
Sbjct: 218 ILIAAENKGNPIYNGLDMFVYQGAESFKIWTGLQADIKTMKKSVLNKL 265
>gi|239637593|ref|ZP_04678565.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
gi|239596811|gb|EEQ79336.1| shikimate 5-dehydrogenase [Staphylococcus warneri L37603]
Length = 271
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 22/282 (7%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIY--VPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
F +I P+ HS P++HN F ++ Y V + ++D GF++ P
Sbjct: 5 FAVIGDPISHSLSPLMHNKNFESLDLKYTYEAVNISIEDFDHIKEIIEGKSLDGFNITIP 64
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
+KE ++ + DE+ + ++ AVNT++ R DGK IGYNTD GY G
Sbjct: 65 HKERIIPYLDEIDHQSSSVGAVNTVLIR--DGKWIGYNTDG-------------IGYVTG 109
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAARP 417
+ L ++ GAGGA + +A K ++ + + +R +S DV +
Sbjct: 110 LRQVYNDLENAYILILGAGGASKGIANELNKFVQPKLTVANRTMKRFESWDLDVNQISL- 168
Query: 418 FEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
D ++ I+ N TP GM N D +P+ + L LV D VY P KT +L AE
Sbjct: 169 --DQAESHLDEFDIIINTTPAGMDNNQD-IPIDLKYLNPETLVSDIVYIPYKTPILIAAE 225
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
G I +G++MF+ Q F ++TG +A + M+ VL +
Sbjct: 226 KKGNPIYNGLDMFVYQGAESFKIWTGLQADIKTMKNSVLNEL 267
>gi|385262165|ref|ZP_10040280.1| shikimate dehydrogenase [Streptococcus sp. SK643]
gi|385191906|gb|EIF39318.1| shikimate dehydrogenase [Streptococcus sp. SK643]
Length = 284
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV ++ +L+ + G ++
Sbjct: 7 TRLVAVVANPIKHSISPFIHNSAFEATTTNGAYVAWEIEAAELEVTVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLASDVM 412
SF + G+ L G GGA +++ A G +++ IF I E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGGGGAAKSILAQAILDGVSQISIFVRSISMEKTGTYLDKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q + +L NAT +GM + VPVS L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQARIAESDLLVNATSVGMDGQSSPVPVSI-VLPETLLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G ++G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YKPFETPFLKWARSQGNPAINGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|299473659|emb|CBN78053.1| Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
[Ectocarpus siliculosus]
Length = 696
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 215/516 (41%), Gaps = 43/516 (8%)
Query: 27 SNMYQAKAEGADVVEIRLDCI-NNFQPGKDLE--IILTKKP--LPVLIVYRPKWAGGLYE 81
+++ EG D +E+R+D + +N P L IL + LPV+ R K G +
Sbjct: 196 TDLLPTLTEGVDAMELRVDLLADNEDPYTVLRQLSILRRHTGYLPVVFTIRSKGQCGAFP 255
Query: 82 GDEHKRLEALHLAEDLGADYVDFELKVASNI---LGKQYSSHQSGTRFIVSCNLDCETPS 138
D K G + +D E + L ++ + G + S ++ +
Sbjct: 256 DDPEKIFRLARWGLRAGCEVMDVEANWPMSYREGLIREAGENYPGAVLVGSYHVVGRKTT 315
Query: 139 EEDLGYLVSRMQATGA-DIIKLVFSVNDITEIARIFQLLSHCQVPI--IAYSVGERGLVS 195
EE L GA D +K+V + + + R+ +P+ I + E G +S
Sbjct: 316 EEQAKELFMECYHDGAVDGVKVVTTAFEPEDSIRVHAAAKSLALPVPYIGLCLTETGKLS 375
Query: 196 QLLSPKFNGALVYGSLKGTPVLGLPTVESLRQT--YKVEHINADTKVFGLISKPVGHSKG 253
++L+ +F + + P + P S ++ ++ E + F L P+ S
Sbjct: 376 RVLNKRFTPV----THENLPFVAAPGQMSSKEIMHHRAELGLCPPRSFFLFGSPISASPS 431
Query: 254 PILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPL 313
P +HN FR Y +D S PDF G SV P+K+ V+ DEV
Sbjct: 432 PDMHNAGFRSTGLPHEYFLCEGEDPAIMAEALSRPDFGGASVTIPHKQNVLPLLDEVSEA 491
Query: 314 AQAIAAVNTII--RRPSDG--KLIGYNTDCEASITAIEDAIK-ERGYKNGTASFGSPLAG 368
A+AI AVNT++ P G +L G NTD + ++ ++ G++ G G
Sbjct: 492 AEAIGAVNTVVVGTDPETGARRLRGDNTDWLGILRPVKARLEASSGWEQGR-------GG 544
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
V+ G A AL F + G VV+++ +A+ LA GAA D +
Sbjct: 545 VALVVGAGGAAMGAL-FAMQRLGLEVVVYNRTPSKAEELAGRFGGAAVSALDAETLEKAC 603
Query: 429 GAILANATPLGMHPNTDRVPVSEE-TLRDYQL-----VFDAVYTPRKTRLLKDAEAAGAI 482
GA + +P + E TL DY L VFDA Y P T LL A+ A
Sbjct: 604 GAAAVDVV-------VSTIPAAAEFTLPDYLLESKPVVFDAAYKPALTSLLAQAKEAQCP 656
Query: 483 IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
V G +M + Q + QF L+T + AP+E M V AK
Sbjct: 657 YVQGADMLVEQGLEQFQLWTERRAPREEMEGAVFAK 692
>gi|257877328|ref|ZP_05656981.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
gi|257811494|gb|EEV40314.1| shikimate 5-dehydrogenase [Enterococcus casseliflavus EC20]
Length = 282
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I+ TK+ GLI PVGHS P ++N F ++ + +Y+ + D + + + +
Sbjct: 3 EKISGKTKLLGLIGTPVGHSGSPAMYNYGFDQLDIDAVYLAFDIKEDQVAQAIEAFRTFK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
+G +V P K A ++ DE+ P A+ + A+NTI+ +GKL+G+ TD
Sbjct: 63 MSG-NVTMPCKTAAAEYMDELTPAAKMVGAINTIVN--DEGKLVGHITDG---------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID---FERAK 405
G+ + + + + FV+ GAGGA A+ GA + IF+I +E+ K
Sbjct: 110 ---VGFVDNLQAHDVKMKDKKFVVIGAGGAATAIQVQLAIEGAASIAIFNIKDAFYEKGK 166
Query: 406 -----------SLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL 454
LA ++ A + +L + + L NAT +GM P+++ L
Sbjct: 167 ETVARIKEYYPDLAIEIYDLAD--QALLAEKINEADCLVNATTVGMGEGNTATPIADTDL 224
Query: 455 RDYQL-VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
L V DA+Y P T+LLKDA A G V G M + Q F LFTGKE P
Sbjct: 225 LHADLTVADAIYNPPMTQLLKDASAKGCKTVGGKGMLIGQGKAAFKLFTGKELP 278
>gi|339446050|ref|YP_004712054.1| hypothetical protein EGYY_26520 [Eggerthella sp. YY7918]
gi|338905802|dbj|BAK45653.1| hypothetical protein EGYY_26520 [Eggerthella sp. YY7918]
Length = 290
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 31/296 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T+ LI PV HS P +HN +F + + YV V ++L+ +
Sbjct: 7 ISGHTQTIALIGSPVEHSMSPAMHNASFEKLGLDYAYVVFDVQPENLEAVVKGMKAMGIP 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K ++ + DE+ A+ + AVNT++ + DGKL+G+NTD
Sbjct: 67 GFNVTMPLKTPILPYLDELSDAAKLMGAVNTVVLQ--DGKLVGHNTDG------------ 112
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV----IFDIDFE----R 403
G+ G + G+ ++GAGGAG A+ A G + + I D +E R
Sbjct: 113 -AGFMRNLKENGVDVIGKKVTISGAGGAGSAIFTQAALDGVKEIDVYNIRDSFYEATERR 171
Query: 404 AKSLASDVMGAARPFEDI-----LNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ 458
LA+ G A D+ L A+ NAT +GM P + + E+ L +
Sbjct: 172 IAELAAQT-GCAVTLHDLADKDDLRASVADSALFINATRVGMPPLENECTLDEDMLHEGL 230
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
+ D VY PR T+LL +A G V+G+ M L QA ++TG+E P +++ E+
Sbjct: 231 ALADTVYNPRTTKLLAMGQAHGNKTVNGLGMLLWQAAIGEKIWTGQEMPVDYIEEL 286
>gi|294494923|ref|YP_003541416.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
gi|292665922|gb|ADE35771.1| shikimate dehydrogenase [Methanohalophilus mahii DSM 5219]
Length = 268
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 140/280 (50%), Gaps = 20/280 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
KVFG++ P+ HS P +HN FR + + Y V LK + F G ++
Sbjct: 3 KVFGVLGDPIEHSLSPAMHNAAFRELEMDCEYHAFRVRHKYLKNAILGAQAMGFGGLNIT 62
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE ++F + LA+ I AVNT+ +DG + G+NTD + A+ +A
Sbjct: 63 VPHKEKALEFTNP-DTLARRIGAVNTV--SFNDG-IRGHNTDGLGAEMALLEA------- 111
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G + VL GAGGA RA+AF +GA V I + E+A+ LA DV +
Sbjct: 112 ------GVGINASNVVLVGAGGAARAIAFHFAEKGAGVTIANRTPEKAEVLAEDVGCSHA 165
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
E++ + IL NAT GMHP+ D S + L VFD VY P +T+LL A
Sbjct: 166 GLENLKELLQDSD-ILINATSAGMHPHIDSTIASRDILHPGLAVFDIVYNPLQTKLLHQA 224
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
E AGA + GV M + Q F ++TG++ P E MR VL
Sbjct: 225 ELAGAKPIGGVAMLVHQGAEAFRIWTGQKPPVEVMRNAVL 264
>gi|312135613|ref|YP_004002951.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
gi|311775664|gb|ADQ05151.1| shikimate 5-dehydrogenase [Caldicellulosiruptor owensensis OL]
Length = 283
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFSVGFP 298
LI K + HS P +HN + + +Y + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSELGIDAVYSNVELSDFVKLKEFVEMVRKDKDVVGFNITIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE +++FCDEV + I A NT+ + +GKL+ YNTD G+K
Sbjct: 66 YKEDILEFCDEVSEDVRIIKAANTV--KKKNGKLLAYNTDW-------------IGFKRS 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGAARP 417
G + + ++ G+GGA +A +G G + V + + +E+ +S+ S
Sbjct: 111 LEDIGVDVKDKKILVLGSGGAAKACIYGLYRMGVKEVFVTNRTYEKTESIKS-------L 163
Query: 418 FEDILNFQPE--------KGAILANATPLGMHPNTDRVPVSEETLRDY-----QLVFDAV 464
FEDIL P K I+ N T +GM PN + P E +Y V+D +
Sbjct: 164 FEDILKIIPVEWLKKYDFKYDIIINTTSVGMFPNIENSPFDFE---NYVAGIPVFVYDII 220
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P KT LK+AE G +G++M + QA+ ++ G
Sbjct: 221 YNPLKTTFLKEAEIRGIKTGNGLKMLVYQAVEAEKIWFG 259
>gi|193215315|ref|YP_001996514.1| shikimate 5-dehydrogenase [Chloroherpeton thalassium ATCC 35110]
gi|193088792|gb|ACF14067.1| shikimate 5-dehydrogenase [Chloroherpeton thalassium ATCC 35110]
Length = 296
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 36/302 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVN---YNGIYVPMFVDDLKKFFSTYSSPDFAGFSV 295
K+ G++ + +S P++HN H+ Y I+ + + + AGF+V
Sbjct: 5 KILGILGHKIDYSLSPLIHNTAAEHLGLDYYYTIFNIHSAESIPAAIEGMRALGIAGFNV 64
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+K+ D++ P A + AVNTI+ + DG LIGYNTD E G+
Sbjct: 65 TIPYKERVVKYLDQLAPSASVVQAVNTIVNQ--DGLLIGYNTDVE-------------GF 109
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS--RGARVVIFDIDFERAKSLASDVMG 413
F + L + + G GGA RA K+ + + + + + + L D++
Sbjct: 110 AEPLLPFQAQLKHQSVAIFGNGGAARATVEALKNLFEPSSIHLIVRNMRKGEELKQDLVR 169
Query: 414 AARPFEDILNFQPEKGAI--------LANATPLGM-----HPNTDRVPV---SEETLRDY 457
+ + ++ E + + NATP+G P T P+ S D
Sbjct: 170 RSMYLKISVHETDEPATLELLKTCRLIVNATPIGTVYANAEPGTKSEPLLPGSSYIWNDQ 229
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
+ +D VY+P T L+DA+ GA ++SG++M + QA F L+TGK+ P + ++ V+
Sbjct: 230 HIAYDLVYSPPMTAFLEDAKNHGATVISGIDMLIGQAARAFQLWTGKDMPLDIVKAAVMK 289
Query: 518 KF 519
K
Sbjct: 290 KI 291
>gi|398868804|ref|ZP_10624196.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM78]
gi|398232420|gb|EJN18385.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM78]
Length = 271
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 22/262 (8%)
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN + + + +V V+D + + G +V PYK AVM + D+V A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMPYLDKVDESAR 82
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNTI DG L GYNTD ++ A+++ + R + + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAVRALQEVTELRDKR--------------IAVIG 126
Query: 376 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 435
AGGA RA+ +G V +F+ ER +LA D+ AR I F + I+ NA
Sbjct: 127 AGGAARAVVYGCLQAAGEVTVFNRSIERGTALAEDL--GARWGGSIEAFTAKSFDIVINA 184
Query: 436 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
T +G P+++ + + L + +V D + P T LL A+A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLASHLIVMDVAFMPVHTALLLQAKALGCSTVAGTRMLVHQA 241
Query: 495 IGQFNLFTGKEAPKEFMREIVL 516
Q L+TGKEAP + M + +L
Sbjct: 242 CRQIELYTGKEAPIDIMEQAML 263
>gi|338814240|ref|ZP_08626271.1| shikimate 5-dehydrogenase [Acetonema longum DSM 6540]
gi|337273771|gb|EGO62377.1| shikimate 5-dehydrogenase [Acetonema longum DSM 6540]
Length = 291
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 130/282 (46%), Gaps = 32/282 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSVG 296
+ +GL+ + + HS P +H FR +N YV P+ D L + + G +V
Sbjct: 2 RFYGLLGETLSHSLSPEIHGYLFRRLNIEAAYVLFPVAADKLAEAVNGLRLLGAGGVNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
PYK +++ DE+ A+ + AVNT++ R DG+ IGYNTD + G+
Sbjct: 62 IPYKISIVPLLDELSVEARMLGAVNTVLFR--DGRAIGYNTDYD-------------GFG 106
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G AG+ V+ G GGA R A+ + GA V L S
Sbjct: 107 LMLQQHGIAAAGKTAVVLGTGGAARTAAYWLRDHGAAAV----------KLVSRRPAGTE 156
Query: 417 PFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
PFE D L P +L NATP+G +P+T+ P+ + L + + D +Y P +TRL
Sbjct: 157 PFETLPYDRLKVLPPTD-LLVNATPVGTYPHTEETPLDRDLLSRFANLVDLIYNPPETRL 215
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
L++A G V+G+ M QA+ ++ G+ E + +
Sbjct: 216 LREARQQGIPAVNGLTMLAAQAVAAEEIWQGRSLAGELLEPL 257
>gi|363900511|ref|ZP_09327016.1| shikimate 5-dehydrogenase [Oribacterium sp. ACB1]
gi|395209196|ref|ZP_10398361.1| shikimate dehydrogenase [Oribacterium sp. ACB8]
gi|361956385|gb|EHL09703.1| shikimate 5-dehydrogenase [Oribacterium sp. ACB1]
gi|394705797|gb|EJF13323.1| shikimate dehydrogenase [Oribacterium sp. ACB8]
Length = 289
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 40/295 (13%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T+++GL+ PV HS P +HN FR ++ N Y+ V +DL+
Sbjct: 5 EIDGKTRLYGLLGNPVSHSLSPFIHNEGFRRLSLNARYLAFSVKEEDLENTLFALRKMGV 64
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ P KEAV+ CD + A+ ++VNT++ +GK+ G +TD A+E
Sbjct: 65 GGLNLTMPLKEAVLSLCDSLSKEARLSSSVNTLVF-SENGKMTGCSTDGIGFFRALEA-- 121
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF-ERAKSLAS 409
+NG + G+ L G GGAG+A+ SR I +I +RA S+
Sbjct: 122 -----ENGVVN------GKKLCLMGLGGAGKAIL----SRAVYTEISEIRLLQRASSIEK 166
Query: 410 D---------------VMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL 454
+ ++G+ +E+ L PE+ IL N+T +GM +P + L
Sbjct: 167 NRAFIEKVERETGKQILLGS---YEENLAEFPEESDILVNSTNVGMGAEASLIP-EVKLL 222
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T+LL A AG ++G+ M QA F L+TGK+ P+E
Sbjct: 223 HKGLFVADCIYHPFETKLLSQAREAGLRYMNGLPMLFYQAAEAFRLWTGKDYPEE 277
>gi|392870671|gb|EAS32492.2| pentafunctional AROM polypeptide [Coccidioides immitis RS]
Length = 1589
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 217/519 (41%), Gaps = 72/519 (13%)
Query: 36 GADVVEIRLDCINNFQPGKDL----------EIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D+ ++ ++ LP++ R K GG + D H
Sbjct: 1071 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1130
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE---TPSEED 141
L+ LA +G+++VD E+ ++L + + G I++ + D + +
Sbjct: 1131 DAALDLYRLAVRMGSEFVDLEVTFPEHML--RAVTEMKGFSKIIASHHDVSGSLSWANGS 1188
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
G ++ G DIIKLV + + + + + Q +P+IA ++GE+G +S++
Sbjct: 1189 WGQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAREIPVIAINMGEKGRLSRI 1247
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + + F + KPV S+ P
Sbjct: 1248 L----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSLMGEIEPRKFAIFGKPVSASRSPT 1303
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F V Y + D+++ +PDF G SV P K +M DE+ P AQ
Sbjct: 1304 MHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEAQ 1363
Query: 316 AIAAVNTII---RRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D +LIGYNTD + + + RG K + SF
Sbjct: 1364 VIGAVNTIVPIPRGPGDMTGHPRLIGYNTDWQGMVRCL-----RRG-KAISPSFADTAVP 1417
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
+ + G GG RA S G I+ I AK V A F + + Q K
Sbjct: 1418 GLVI--GGGGTARAAIHALYSMGYS-PIYLIGRSEAK-----VAEMASTFPEKYSVQVLK 1469
Query: 429 GAILANATPL---GMHPNTDRV-PVSEETL---------RDYQL-----------VFDAV 464
A P+ G P + P E L D +L + +
Sbjct: 1470 DATSLENLPMVAIGTIPGDRPIDPSMREVLCRLFENAARVDSELSAKGEVPAKRVLLEMA 1529
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P T L + A +G + G+E + Q + QF L+TG
Sbjct: 1530 YKPDITPLSQLASDSGWSTIPGLEALVGQGVHQFELWTG 1568
>gi|322371081|ref|ZP_08045633.1| shikimate 5-dehydrogenase [Haladaptatus paucihalophilus DX253]
gi|320549071|gb|EFW90733.1| shikimate 5-dehydrogenase [Haladaptatus paucihalophilus DX253]
Length = 267
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFP 298
V+GL+ PVGHS P +H + ++ + YV + + ++ +G +V P
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEVAYDELDMDARYVTFEPEAIGPAIEGANALGISGLNVTIP 61
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGKLIGYNTDCEASITAIE-DAIKERGYK 356
+KE + E LA+ I AVNT+ P D G+NTD E + A E + G
Sbjct: 62 FKEDALSHV-EPDSLAEHIGAVNTVDFSAPDDSVPTGHNTDAEGARRAFERHGVSRDGAS 120
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G F+LA GA V I + RA+SLA+DV GA+
Sbjct: 121 AVVVGAGGAARAIAFMLA--------------DDGATVEIANRTVSRAESLAADVDGASA 166
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
D L +L NAT +GM +D PV L V DAVY+P TRLL++A
Sbjct: 167 HGLDELPGLVSGADVLVNATSVGM--ESDESPVPATALHGDLAVMDAVYSPLDTRLLREA 224
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
A GA + G M L Q + F L+TGK+AP E M
Sbjct: 225 SARGATTIDGAWMLLFQGVAAFELWTGKDAPVERM 259
>gi|283833360|ref|ZP_06353101.1| shikimate dehydrogenase [Citrobacter youngae ATCC 29220]
gi|291071004|gb|EFE09113.1| shikimate dehydrogenase [Citrobacter youngae ATCC 29220]
Length = 288
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 407
E G+ + G+ VL GAGGA A+ A G + + D FE+A++
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKLFNRKDEFFEKAQAF 167
Query: 408 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
A V + + F D L IL N T +GM P + V++ +L
Sbjct: 168 AKRVNENTDCVVTVIDLADRQAFADAL----ATADILTNGTKVGMKPLDNESLVTDVSLL 223
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R LV + VY P T+LL+ A+ AG + G M L Q QF L+TGK+ P E+++++
Sbjct: 224 RPELLVTECVYNPHMTKLLQQAQLAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQV 283
Query: 515 V 515
+
Sbjct: 284 M 284
>gi|350269991|ref|YP_004881299.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
gi|348594833|dbj|BAK98793.1| shikimate dehydrogenase [Oscillibacter valericigenes Sjm18-20]
Length = 286
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 20/291 (6%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
I+ +TK+ LI P+ S + N + N Y D L +FA
Sbjct: 3 IDINTKMVTLIGTPLSQSFAARMQNAGYEAAGLNMFYFYTEADKEHLGDIVGGLRYMNFA 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P K ++++ DE+ PL + + A NT+++ P +GKLIGYNTD T +
Sbjct: 63 GFAVTKPNKVRILRYLDELDPLCRKMGASNTVVKTP-EGKLIGYNTDGIGFYTTL----- 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFER-AKSLASD 410
T G + +F G GGAGRA+ GAR + FE AKSLA+D
Sbjct: 117 -------TQDGGIEVDQSVFFCFGGGGAGRAMCSVLAYYGARKIYITDAFEPCAKSLAAD 169
Query: 411 VMGAARPFEDILNF----QPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYT 466
+ + P + +++ + ++ NA+ +GM + P+ E ++ Q FDA Y
Sbjct: 170 INESFAPVAEFVHYGDLSKLAACDVVLNASGIGMGATIGQSPMPPEYIQPSQFYFDACYN 229
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLA 517
P KTR L +AE G +++G+ M L Q Q L+TG++AP E MR +LA
Sbjct: 230 PDKTRFLLNAEEKGCRVLNGLGMSLHQGTAQIELWTGQKAPVEAMRRELLA 280
>gi|308182041|ref|YP_003926169.1| shikimate 5-dehydrogenase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308047532|gb|ADO00076.1| shikimate 5-dehydrogenase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 296
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 17/295 (5%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L + +
Sbjct: 2 TERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNKKLPSAIESIRTL 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ V+ D++ P A+ AVNTI+ DG L GY TD + +++D
Sbjct: 62 DMRGSNVSMPNKQKVLPLLDKLDPAAEMCGAVNTIVN--DDGILTGYTTDGIGFMKSLDD 119
Query: 349 -AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF--ERAK 405
I RG+K T + + V A G F ++D ER
Sbjct: 120 EGINIRGHKM-TLAGAGGAGTAIAVQAALDGVSEMSIFNLHDAEWENAKHNVDLINERTS 178
Query: 406 SLASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFD 462
A+ ED +F+ E I +AT +GM P D+ V + + LR +VFD
Sbjct: 179 CHAT-----LHELEDRDDFKKEIQDSYIYTDATGVGMKPLEDKTLVDDPSWLRKDLIVFD 233
Query: 463 AVYTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
VY PR T+L+K A+ AG + +G+ M L Q F L+TG++ P +++R I+
Sbjct: 234 TVYAPRTTKLMKVAQEAGVEHVFNGLGMMLEQGAAAFKLWTGEDMPVDYIRHILF 288
>gi|308172646|ref|YP_003919351.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|384163203|ref|YP_005544582.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
gi|307605510|emb|CBI41881.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|328910758|gb|AEB62354.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens LL3]
Length = 303
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 16 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 75
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G LIG++TD
Sbjct: 76 RGFNVSMPNKMKILPYLDELADSAKFTGAVNTVVNE--NGTLIGHSTDG----------- 122
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 123 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 180
Query: 407 ----LASDVMGAA-----RPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G++ P ED L + I N T +GM P + + V E+T
Sbjct: 181 NVRIINEEMKGSSCKANIFPLEDQDALRAEIATSDIFTNGTGVGMKP-LEGLSVIEDTSM 239
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+ AG ++G+ M L Q F +TG+E P ++++E
Sbjct: 240 LRPDLIVTDVVYNPVTSKLLEQAQEAGCKTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 299
>gi|85077284|ref|XP_956000.1| pentafunctional AROM polypeptide [Neurospora crassa OR74A]
gi|74622647|sp|Q8X071.1|ARO1_NEUCR RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|18376380|emb|CAD21207.1| probable PENTAFUNCTIONAL AROM POLYPEPTIDE [Neurospora crassa]
gi|28917040|gb|EAA26764.1| pentafunctional AROM polypeptide [Neurospora crassa OR74A]
Length = 1563
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 219/496 (44%), Gaps = 45/496 (9%)
Query: 36 GADVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK-RLEAL 91
G+D VE+R+D + ++ P K + ++ + +P++ R GG + D+++ L+
Sbjct: 1070 GSDAVELRVDLLEDYDPEFVAKQVALLRSAARIPIVYTVRTVSQGGKFPDDDYELALKLY 1129
Query: 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE-TPSEEDLGYLVSRMQ 150
G +Y+D E+ + ++ + +++ G I++ + D + T S ++ G++ +
Sbjct: 1130 RTGLQAGVEYLDLEMTMPDEVI--EAVTNEKGYTHIIASHHDPKATLSWKNGGWIQYYNK 1187
Query: 151 A-TGADIIKLVFSVNDITE---IARIFQLLSHCQ-VPIIAYSVGERGLVSQLLSPKFNGA 205
A D++KLV ++ + +AR L+ P+IA ++G G +S++L NG
Sbjct: 1188 ALQHGDVVKLVGVARELADNFALARFKASLAAAHDKPLIALNMGAAGKLSRVL----NGF 1243
Query: 206 LVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHNPTFR 262
L S P P + +RQ + + + F L P+ S+ P LHN FR
Sbjct: 1244 LTPVSHPALPSKAAPGQLSAAEIRQALALIG-ELEPRSFHLFGNPISASRSPALHNALFR 1302
Query: 263 HVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNT 322
Y D+ +P F G SV P K +M DEV A+ I AVNT
Sbjct: 1303 DNGLPHQYSLFETDNAADVKDLIRAPGFGGASVTIPLKLDIMPLLDEVSDAAKVIGAVNT 1362
Query: 323 II--RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAG 380
II R L G NTD + A+ +A + K SP AG ++ GAGG
Sbjct: 1363 IIPVRNGDKVTLRGDNTDWMGMVYALRNAGVVKCTKE------SPTAG---MVVGAGGTT 1413
Query: 381 RALAFGAKSRG-ARVVIFDIDFERAKSLAS------DVMGAARPFEDILNFQPEKGAILA 433
RA G A + + + +R K+LA D+ + P E++ + +++
Sbjct: 1414 RAAVHALHDLGFAPIYVVARNADRVKALAESFPAEYDIRSLSTP-EEVAAESTAQPSVVI 1472
Query: 434 NATPLGMHPNTDRVPVSEETLRD------YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGV 487
+ P + V +LR ++ + YTPR T L++ AE A + G+
Sbjct: 1473 STIPADKPIDQSMREVIVASLRHPSVADGKHVLLEMAYTPRHTPLMQLAEDAHWQTIPGL 1532
Query: 488 EMFLRQAIGQFNLFTG 503
E+ Q QF L+TG
Sbjct: 1533 EVLAAQGWYQFQLWTG 1548
>gi|384158319|ref|YP_005540392.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|384167370|ref|YP_005548748.1| shikimate dehydrogenase [Bacillus amyloliquefaciens XH7]
gi|328552407|gb|AEB22899.1| quinate/shikimate dehydrogenase [Bacillus amyloliquefaciens TA208]
gi|341826649|gb|AEK87900.1| putative shikimate dehydrogenase [Bacillus amyloliquefaciens XH7]
Length = 294
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
IN T++ GL + P+GHS P +HN F+ + N Y+ V + L+ + + +
Sbjct: 7 RINGKTQLIGLFATPIGHSLSPAMHNLAFKKLGLNYAYLAFEVGNEQLEDVVTGMRALNV 66
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
GF+V P K ++ + DE+ A+ AVNT++ +G LIG++TD
Sbjct: 67 RGFNVSMPNKMKILPYLDELADSAKFTGAVNTVVNE--NGTLIGHSTDG----------- 113
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF---DIDFERAKS 406
GY G + G+ L G+GGA +A + G + IF D FE+A+
Sbjct: 114 --MGYVRNLKEHGIDITGKKMTLVGSGGAATPIAIQSALEGLGEISIFARNDAFFEKAEE 171
Query: 407 ----LASDVMGAA-----RPFED--ILNFQPEKGAILANATPLGMHPNTDRVPVSEET-- 453
+ ++ G++ P ED L + I N T +GM P + + V E+T
Sbjct: 172 NVRIINEEMKGSSCKANIFPLEDQDALRAEIATSDIFTNGTGVGMKP-LEGLSVIEDTSM 230
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
LR +V D VY P ++LL+ A+ AG ++G+ M L Q F +TG+E P ++++E
Sbjct: 231 LRPDLIVTDVVYNPVTSKLLEQAQEAGCKTINGLGMMLWQGAMAFEYWTGREMPVQYIKE 290
>gi|150019383|ref|YP_001311637.1| shikimate 5-dehydrogenase [Clostridium beijerinckii NCIMB 8052]
gi|189046309|sp|A6M251.1|AROE_CLOB8 RecName: Full=Shikimate dehydrogenase
gi|149905848|gb|ABR36681.1| shikimate 5-dehydrogenase [Clostridium beijerinckii NCIMB 8052]
Length = 270
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 24/259 (9%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFP 298
+GLI + + HS P +HN F+ + G Y V+ +L K + G +V P
Sbjct: 4 YGLIGEKLSHSLSPKIHNTLFKDLKIEGAYKLFEVEKENLGKLIESIKLLKIKGVNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YK+ VM++ D + A+ I AVNTI D KL GYNTD Y G
Sbjct: 64 YKQDVMEYLDFISDEAKKIGAVNTIYLE--DNKLYGYNTDY---------------YGFG 106
Query: 359 TASFGSPLAGR--MFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
T + + R + ++ G GGA +A+ G + + + S D +
Sbjct: 107 TILNNNEIVIRDNVAMVLGNGGAAKAVITYLLDHGIKKIYLVSRKIKGNSADKDERIEFK 166
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
+E+I KG IL N TPLGM+P D PV+E+ + ++ + D +Y PR+TR LK
Sbjct: 167 TYEEISEI---KGDILINTTPLGMYPKVDDTPVNEDIINNFNSLIDIIYNPRETRFLKIG 223
Query: 477 EAAGAIIVSGVEMFLRQAI 495
+ + + G+EM + QAI
Sbjct: 224 KNSNKKVCGGIEMLVGQAI 242
>gi|397906480|ref|ZP_10507280.1| Shikimate 5-dehydrogenase I alpha [Caloramator australicus RC3]
gi|397160437|emb|CCJ34617.1| Shikimate 5-dehydrogenase I alpha [Caloramator australicus RC3]
Length = 271
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 22/280 (7%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
+++GL+ K +G+S PI+HN + +N NG+Y V D L F + G +V
Sbjct: 2 NEIYGLLGKKLGYSFSPIIHNIILKELNINGLYCLFEVEEDKLNLAFEGFKILKIKGINV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYK ++ DE+ A+ I ++NTI + +G IGYNTD G+
Sbjct: 62 TIPYKIKTIELVDELSLEAKNIGSINTI--KFMEGYSIGYNTDY-------------FGF 106
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+ + + ++ + G GGA RA+ K ++ +I R K D+
Sbjct: 107 IRSLSKYNIDVKNKIVYVLGTGGASRAVIQALKDLNSKKII---AVTRNKKNKKDLDVEL 163
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKD 475
+ ++ + KG IL N TPLGM+P+ D +P+ + + ++ +V+D +Y P++T L+K
Sbjct: 164 IDYYEL--SKKGKGDILINCTPLGMNPDLDILPIERDIIANFSIVYDLIYNPKETILMKW 221
Query: 476 AEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
A+ +G+ M + QAI ++ G + +I+
Sbjct: 222 AKQFNIPSYNGMAMLVYQAIKAQEVWNGTNLDIKLTDKII 261
>gi|292670694|ref|ZP_06604120.1| shikimate dehydrogenase [Selenomonas noxia ATCC 43541]
gi|292647640|gb|EFF65612.1| shikimate dehydrogenase [Selenomonas noxia ATCC 43541]
Length = 287
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPD--FA 291
I TKV +I P+ HS PI+ N + + +Y + V + Y D
Sbjct: 3 ITGKTKVLAVIGAPIAHSLSPIIQNAALQAAGIDCVYAALPVRPGALSSAVYGLRDAGVV 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K +M+ D + AQ I AVNT++ + +DG L+G+NTD
Sbjct: 63 GFNVTIPFKTEIMELMDALSEDAQRIRAVNTVVVQ-TDGTLMGHNTDVV----------- 110
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLA-- 408
G+ G A G AG+ V+ GAGGA RA+ +G G V + + + +L
Sbjct: 111 --GFLAGFAEHGVVPAGKRAVVLGAGGAARAVLWGLLRSGISSVCVGVRNGAKGAALCEE 168
Query: 409 ----SDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDA 463
DV A D L I+ TP+GM P+ D +P V + +V+D
Sbjct: 169 FAADGDVRSAVFDNPDFLACIGSAD-IVVQTTPMGMTPHIDAMPPVDVAAINSSAVVYDL 227
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+YTP KTRLL++AEA G ++G M Q F L+T MR ++
Sbjct: 228 IYTPAKTRLLREAEARGHETINGEMMLAAQGAEAFFLWTNVRPDMALMRRVL 279
>gi|119186687|ref|XP_001243950.1| hypothetical protein CIMG_03391 [Coccidioides immitis RS]
Length = 1543
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 217/519 (41%), Gaps = 72/519 (13%)
Query: 36 GADVVEIRLDCINNFQPGKDL----------EIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D+ ++ ++ LP++ R K GG + D H
Sbjct: 1025 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1084
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE---TPSEED 141
L+ LA +G+++VD E+ ++L + + G I++ + D + +
Sbjct: 1085 DAALDLYRLAVRMGSEFVDLEVTFPEHML--RAVTEMKGFSKIIASHHDVSGSLSWANGS 1142
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
G ++ G DIIKLV + + + + + Q +P+IA ++GE+G +S++
Sbjct: 1143 WGQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAREIPVIAINMGEKGRLSRI 1201
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + + F + KPV S+ P
Sbjct: 1202 L----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSLMGEIEPRKFAIFGKPVSASRSPT 1257
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F V Y + D+++ +PDF G SV P K +M DE+ P AQ
Sbjct: 1258 MHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEAQ 1317
Query: 316 AIAAVNTII---RRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D +LIGYNTD + + + RG K + SF
Sbjct: 1318 VIGAVNTIVPIPRGPGDMTGHPRLIGYNTDWQGMVRCL-----RRG-KAISPSFADTAVP 1371
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
+ + G GG RA S G I+ I AK V A F + + Q K
Sbjct: 1372 GLVI--GGGGTARAAIHALYSMGYS-PIYLIGRSEAK-----VAEMASTFPEKYSVQVLK 1423
Query: 429 GAILANATPL---GMHPNTDRV-PVSEETL---------RDYQL-----------VFDAV 464
A P+ G P + P E L D +L + +
Sbjct: 1424 DATSLENLPMVAIGTIPGDRPIDPSMREVLCRLFENAARVDSELSAKGEVPAKRVLLEMA 1483
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P T L + A +G + G+E + Q + QF L+TG
Sbjct: 1484 YKPDITPLSQLASDSGWSTIPGLEALVGQGVHQFELWTG 1522
>gi|303317582|ref|XP_003068793.1| 3-dehydroquinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|327507658|sp|C5PA86.1|ARO1_COCP7 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|240108474|gb|EER26648.1| 3-dehydroquinate synthase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1589
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 217/519 (41%), Gaps = 72/519 (13%)
Query: 36 GADVVEIRLDCINNFQPGKDL----------EIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G+D VE+R+D + + D+ ++ ++ LP++ R K GG + D H
Sbjct: 1071 GSDAVELRVDLLVDPSSANDIPSVDYVAEQISMLRSRVSLPLVFTIRTKSQGGRFPDDAH 1130
Query: 86 KR-LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCE---TPSEED 141
L+ LA +G+++VD E+ +IL + + G I++ + D + +
Sbjct: 1131 DAALDLYRLAVRMGSEFVDLEVTFPEHIL--RAVTEMKGFSKIIASHHDVSGSLSWANGS 1188
Query: 142 LGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGERGLVSQL 197
G ++ G DIIKLV + + + + + Q +P+IA ++GE+G +S++
Sbjct: 1189 WGQFYNKALQYG-DIIKLVGVAKCLDDNIALRKFKTWAQDAHEIPVIAINMGEKGRLSRI 1247
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADT--KVFGLISKPVGHSKGPI 255
L NG + S P P S + K + + + F + KPV S+ P
Sbjct: 1248 L----NGFMTPVSHPKLPFKAAPGQLSAQDIRKGLSLMGEIEPRKFAIFGKPVSASRSPA 1303
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN F V Y + D+++ +PDF G SV P K +M DE+ P AQ
Sbjct: 1304 MHNALFAQVGLPHAYSRLETDNVEDVREFIHAPDFGGASVTIPLKLDIMPLLDEISPEAQ 1363
Query: 316 AIAAVNTII---RRPSD----GKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
I AVNTI+ R P D +LIGYNTD + + + R K + SF
Sbjct: 1364 VIGAVNTIVPIPRGPGDMTGYPRLIGYNTDWQGMVRCL------RHGKAISPSFADTAVP 1417
Query: 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEK 428
+ + G GG RA A A + I+ I AK V A F + + Q K
Sbjct: 1418 GLVI--GGGGTARA-AIHALYSMSYSPIYLIGRSEAK-----VAEMASTFPEKYSVQVLK 1469
Query: 429 GAILANATPL---GMHPNTDRV-PVSEETL---------RDYQL-----------VFDAV 464
A P+ G P + P E L D +L + +
Sbjct: 1470 DATSLENLPMVAIGTIPGDRPIDPSMREVLCRLFENAARVDSELSAKGEVPAKRVLLEMA 1529
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P T L + A +G + G+E + Q + QF L+TG
Sbjct: 1530 YKPDITPLSQLASDSGWSTIPGLEALVGQGVHQFELWTG 1568
>gi|448350577|ref|ZP_21539389.1| shikimate 5-dehydrogenase [Natrialba taiwanensis DSM 12281]
gi|445636146|gb|ELY89309.1| shikimate 5-dehydrogenase [Natrialba taiwanensis DSM 12281]
Length = 271
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 137/286 (47%), Gaps = 21/286 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 296
VFGL+ PVGHS P +H + + ++ YV D+L ++ G +V
Sbjct: 2 DVFGLLGNPVGHSLSPPMHEAAYDELGFDARYVTFEPDSDELAAAIDGAAALGITGLNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTI-IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K+ + E LA I AVNTI S + GYNTD ++ A+ + E
Sbjct: 62 IPFKQDALDLV-EPDDLAARIGAVNTIDFADASTEQPTGYNTDAAGALRALRE--HEVTI 118
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
+N TA AGGAGRA++F GA V I + A LA+DV GA
Sbjct: 119 ENATAVVVG-----------AGGAGRAISFALSDAGADVAIANRTESTAHDLAADVPGAT 167
Query: 416 --RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLL 473
+D L+ + +L NAT +GM N PV + L +V DAVY P +TRLL
Sbjct: 168 GHDLADDTLDSLLTQANVLVNATSVGMEDNA--TPVPADALHAELVVMDAVYRPLETRLL 225
Query: 474 KDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+DA A GA V G M L Q + F L+T ++AP + M E + ++
Sbjct: 226 RDAAAIGAQTVDGAWMLLYQGVEAFELWTDRDAPVDEMNEALRSRL 271
>gi|330839701|ref|YP_004414281.1| Shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
gi|329747465|gb|AEC00822.1| Shikimate dehydrogenase [Selenomonas sputigena ATCC 35185]
Length = 296
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFAGFSV 295
TK +I P+GHS P + N R V + YV P+ + L+ + F GF+V
Sbjct: 6 TKNLAVIGSPIGHSLSPAMQNAAIRAVGLDYAYVALPVLPERLEDGVRGLRALGFRGFNV 65
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K A++ DEV A+AI AVNT++ G+L G+NTD E G+
Sbjct: 66 TIPHKSAILPLLDEVDEAARAIGAVNTVV--CEAGRLKGFNTDVE-------------GF 110
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASDV--- 411
A+ G + G+ VL GAGGA RA +G GA V + + +A+SLA +
Sbjct: 111 LGALAARGFSVEGKRVVLLGAGGAARAALYGLLRSGAAEVTLGVRNAPKARSLAEEFAQY 170
Query: 412 --MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPR 468
+ A E K A++ N TPLGM P T +P V + + + +D +YTP
Sbjct: 171 GEVCALDWNEAAFEEAVRKAALVVNTTPLGMAPQTQAMPPVPWQAVHERTFFYDIIYTPA 230
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA 506
KT+ L+ AE+ G ++G M + Q F L+TG+EA
Sbjct: 231 KTQFLQRAESLGCPTLNGEAMLVGQGAAAFRLWTGREA 268
>gi|323702295|ref|ZP_08113961.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333924359|ref|YP_004497939.1| shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532785|gb|EGB22658.1| shikimate 5-dehydrogenase [Desulfotomaculum nigrificans DSM 574]
gi|333749920|gb|AEF95027.1| Shikimate dehydrogenase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 293
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 17/292 (5%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
IN +TKV GL PV HS P +HN ++ ++ N YVP V L + + A
Sbjct: 6 INGNTKVCGLFGWPVEHSFSPAMHNAAYQRLSLNYTYVPFNVHPASLPQAVQAVRALGLA 65
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K+AV+ D++ AQ I AVNTI+ DGKL+GYNTD + ++ + +
Sbjct: 66 GVNVTVPHKQAVLPLLDQIDAAAQMIGAVNTIVN--VDGKLVGYNTDGSGFVKSLIEGAR 123
Query: 352 ERGYKNGTA---SFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLA 408
KN TA G LA +G AG + +R A + S
Sbjct: 124 -FAPKNKTALILGAGGAARAVAVQLALSGLAGLYITNRTPARAA-------ELAEHVSRT 175
Query: 409 SDVMGAARPF-EDILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFDAVYT 466
+ V A P+ D+ + ++ T +GM P+ D+ P T L QLV D +Y
Sbjct: 176 TGVQAVALPWGHDLPADIVMEVDLVVQTTSMGMSPHIDQCPDFPLTALHAGQLVCDLIYN 235
Query: 467 PRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAK 518
P +T L+ A A GA ++G+ M L Q + F L+TG+ AP + MRE +L +
Sbjct: 236 PDQTAFLRGAAARGAATLNGLGMLLYQGVLAFELWTGQTAPVDVMREALLKQ 287
>gi|347759215|ref|YP_004866777.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
gi|347591733|gb|AEP10775.1| shikimate 5-dehydrogenase [Micavibrio aeruginosavorus ARL-13]
Length = 280
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 27/276 (9%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T+ GLI PV HS P++H + +G Y + + DDL + GF+V
Sbjct: 2 TRKTGLIGHPVSHSLSPVIHTHWLQQYRIDGTYTAIDIAPDDLSTRVRALVDDGYVGFNV 61
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+KE + CD++ AQA+ AVNT+ + G+L G+NTD + I ++ ++ +
Sbjct: 62 TLPHKEEIAFLCDDLDDTAQAVGAVNTVT-IDNRGRLHGHNTDVDGFINHLKSSVPD--- 117
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGA 414
L+G+ V+ GAGGA RA+ + + + + + ERA ++A+D+
Sbjct: 118 --------FHLSGKHAVVLGAGGAARAVLYALLREDFEWITLINRTRERAVAVANDLDDD 169
Query: 415 ARPFEDILNFQPEKGA-----ILANATPLGMHPNTDRVPVSEET--LRDYQLVFDAVYTP 467
R I++++ GA +L N T LGM T + P+ + L +V+D VY P
Sbjct: 170 GRVL--IVDWEKRGGALADTDLLVNTTSLGM---TGQAPLDMDVGGLSPNAVVYDIVYRP 224
Query: 468 RKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
T LL+ A+ G IV+G+ M L QA F+ + G
Sbjct: 225 LMTPLLQQAKMRGNTIVTGLGMLLHQARPAFDAWYG 260
>gi|357042456|ref|ZP_09104161.1| hypothetical protein HMPREF9138_00633 [Prevotella histicola F0411]
gi|355369408|gb|EHG16803.1| hypothetical protein HMPREF9138_00633 [Prevotella histicola F0411]
Length = 250
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 128/273 (46%), Gaps = 36/273 (13%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 299
+GLI P+GHS N F + + N Y+ + ++ F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSVGYFNEKFSNEHINAKYINFEIPSIEDFAEVIESNPELRGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
KE V+ + D + P A AI AVN I R+ L G+N+D +IE + ER +K
Sbjct: 64 KEQVIPYLDSLSPEANAIGAVNVIRITRKGDKTHLKGFNSDVIGFTRSIEPLL-ERHHKK 122
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARP 417
++ G GGA +A+ +G +S G V RP
Sbjct: 123 A-------------LILGTGGASKAVDYGLRSLGIETKF--------------VSRTKRP 155
Query: 418 ----FEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRL 472
+E+I + I+ N TPLGM+PNTD P + E + + L++D +Y P +T
Sbjct: 156 GFFTYEEITPEIIKDYNIIVNCTPLGMYPNTDVCPTLPYEAMDSHNLLYDLLYNPDETLF 215
Query: 473 LKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
++ + GAI +G+EM L QA + + GKE
Sbjct: 216 MQKGKEHGAITKNGLEMLLLQAFASWEFWNGKE 248
>gi|433639425|ref|YP_007285185.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
gi|433291229|gb|AGB17052.1| shikimate 5-dehydrogenase [Halovivax ruber XH-70]
Length = 291
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 133/295 (45%), Gaps = 27/295 (9%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVG 296
V+GL+ PVGHS P +H + + YV D L SS AG +V
Sbjct: 2 DVYGLLGNPVGHSLSPPMHEAAYEARGMDATYVTFEPDRDALGDAIRGASSLGIAGLNVT 61
Query: 297 FPYKEAVMKFCDEVHP--LAQAIAAVNTII----------RRPSDGKLIGYNTDCEASIT 344
P+KE + D V P LA I AVNTI R + + G+NTD ++
Sbjct: 62 IPFKEGAI---DHVEPDDLAARIGAVNTIAFPEGGSAGADDRDAVTRPTGHNTDAAGAVR 118
Query: 345 AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERA 404
A+ +ERG+ + S A + LA GA V + + ERA
Sbjct: 119 AL----RERGFADRDDSLDGATAVVVGAGGAGRAIAFGLA----EAGATVRVANRTVERA 170
Query: 405 KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
+LAS+V A+ D L +L NAT +GM + VP E L + +V DAV
Sbjct: 171 TALASEVPDASGHGLDDLPTLLADATVLVNATSVGMESDESIVP--SEALHEDLVVMDAV 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y PR+TRLL+DA A GA V G M L Q F +TG++AP M ++ + F
Sbjct: 229 YRPRETRLLRDAAATGATAVDGTWMLLYQGAAAFERWTGRDAPVAAMGRVLRSSF 283
>gi|419766401|ref|ZP_14292605.1| shikimate dehydrogenase [Streptococcus mitis SK579]
gi|383354137|gb|EID31713.1| shikimate dehydrogenase [Streptococcus mitis SK579]
Length = 284
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 140/307 (45%), Gaps = 55/307 (17%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEVGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 414
SF + G+ L GAGGA +++ A G +++ +F F K+
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSFSMEKT-------- 161
Query: 415 ARPFEDILNFQP-------------------EKGAILANATPLGMHPNTDRVP---VSEE 452
RP+ D L Q + +L NAT +GM + VP V E
Sbjct: 162 -RPYLDKLQEQTGFRVNLYALGDVSELQARIAESDLLVNATSVGMDGQSSPVPENIVLSE 220
Query: 453 TLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
TL LV D +Y P +T LK A + G ++G+ M L QA F L+TGKE P E +
Sbjct: 221 TL----LVADIIYQPFETPFLKWARSQGNPAINGLGMLLYQAAEAFQLWTGKEMPTEEIW 276
Query: 513 EIVLAKF 519
+ + K+
Sbjct: 277 QSLTEKY 283
>gi|148655701|ref|YP_001275906.1| shikimate 5-dehydrogenase [Roseiflexus sp. RS-1]
gi|148567811|gb|ABQ89956.1| shikimate dehydrogenase [Roseiflexus sp. RS-1]
Length = 283
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 136/282 (48%), Gaps = 29/282 (10%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVGFPY 299
G+I PV HS P LHN F H+ Y +L + ++ +P G +V P+
Sbjct: 7 GVIGDPVDHSLSPFLHNAAFEHLGIVARYERWRTSSAELPQRIASLRAPHILGANVTLPH 66
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAI-EDAIKERGYKNG 358
K AV+ D + P A+ I AVNTI+R P DG+L G NTD A+I + EDA G+
Sbjct: 67 KIAVIPLLDRLDPQAEQIGAVNTIVRLP-DGQLEGCNTDAPATIATLREDA----GFD-- 119
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGA--AR 416
P R+ +L +G A A ++ + + + ERA+ L +DV+ A
Sbjct: 120 ------PTGKRIVLLGASGAARAAACALIAAQATALTVINRTLERAEELLADVLANSDAD 173
Query: 417 PFEDILNFQ----PEKGA---ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRK 469
P+ L PE A ++ NAT LG H D P+ + LVFD VY P
Sbjct: 174 PYLRALTPDDPDVPEAIASADLIINATSLGWH--ADETPLPGHLIPATALVFDMVYRP-- 229
Query: 470 TRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFM 511
TRLL++A AGA + G M +RQA F +TG AP + M
Sbjct: 230 TRLLREAAQAGAATLDGRGMLVRQAALSFERWTGVSAPLDVM 271
>gi|282859528|ref|ZP_06268633.1| putative shikimate 5-dehydrogenase [Prevotella bivia JCVIHMP010]
gi|424900957|ref|ZP_18324499.1| shikimate 5-dehydrogenase [Prevotella bivia DSM 20514]
gi|282587756|gb|EFB92956.1| putative shikimate 5-dehydrogenase [Prevotella bivia JCVIHMP010]
gi|388593157|gb|EIM33396.1| shikimate 5-dehydrogenase [Prevotella bivia DSM 20514]
Length = 249
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGF 297
+GLI P+GHS N F++ N Y+ ++DL + + +P+ G +V
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFQNEGINAKYINFEIPSIEDLTEILAL--NPELKGLNVTI 61
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE ++ + DE+ P A+AI AVN I R+ L G+N+D +IE + +
Sbjct: 62 PYKEQIIPYLDEISPEAKAIGAVNVIRITRKGHKTILKGFNSDVIGFTQSIEPLLMPHWH 121
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
K ++ G GGA +A+ +G KS G D K + ++
Sbjct: 122 KKA-------------LVLGTGGAAKAINYGLKSLG-----LDTKLVSRKPMLEEISYEK 163
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 474
E I ++ ++ N TPLGM+PN + P + E + +++D +Y P +T +K
Sbjct: 164 ITPEIIKDYN-----VIVNCTPLGMYPNVETCPKLPYEAMNTKTILYDLIYNPDQTLFMK 218
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
A GA + +G+EM L QA + + GKE
Sbjct: 219 KGAAQGATVKNGLEMLLLQAFASWEFWHGKE 249
>gi|417848344|ref|ZP_12494290.1| shikimate dehydrogenase [Streptococcus mitis SK1073]
gi|339452870|gb|EGP65491.1| shikimate dehydrogenase [Streptococcus mitis SK1073]
Length = 284
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 141/298 (47%), Gaps = 37/298 (12%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNSAFEATATNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLAS-DVMG 413
SF + G+ L GAGGA +++ A G +++ +F R K+ D +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSISREKTRPYLDKLQ 169
Query: 414 AARPF-------EDILNFQPE--KGAILANATPLGMHPNTDRVPVS---EETLRDYQLVF 461
F ED+ Q + +L NAT +GM + VP S ETL LV
Sbjct: 170 EQTGFKVDLYALEDVSELQARIAESDLLVNATSVGMDGQSSPVPESIVLPETL----LVA 225
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 226 DIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPAEEIWKSLTEKY 283
>gi|438003027|ref|YP_007272770.1| shikimate 5-dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|432179821|emb|CCP26794.1| shikimate 5-dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
Length = 287
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 24/280 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFA 291
++ T+++ ++ P+ HS PI+HN F + N + I++ + D +LK S D
Sbjct: 7 VSGKTQIYAILGTPISHSLSPIIHNTLFCYNNLDKIFLALNTDTNNLKLAIDAVRSFDIK 66
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G S+ P KE V+K+CD++ P A+ I AVN I+ + +G L+GYNTDC
Sbjct: 67 GLSITMPLKEEVVKYCDKLLPEAEIIGAVNCILNK--NGTLVGYNTDCT----------- 113
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASD 410
G+ + L R+F+ GAGG G+A+A +G ++ + + ++A++L
Sbjct: 114 --GFSMSIINKVGVLPDRVFIF-GAGGVGKAIAAELILKGVKKLFLTNRSIDKAENLRKR 170
Query: 411 VMGAARPFEDILNFQP---EKGAILANATPLGMHPNTDRVPV--SEETLRDYQLVFDAVY 465
+ ++ +I+ + E+ + L + N P + E +R L+++ +Y
Sbjct: 171 LEHLSKTEVEIIPWDKKVMERRHKRISHYKLYISRNVQWKPCYSAVELVRSNTLIYETIY 230
Query: 466 TPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
PR+T L+ A + ++ G+ + + QA + ++TG E
Sbjct: 231 EPRETTLISKARSLNLEVIEGINLLVYQAAAAYKIWTGLE 270
>gi|326479819|gb|EGE03829.1| pentafunctional AROM polypeptide [Trichophyton equinum CBS 127.97]
Length = 1570
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 212/519 (40%), Gaps = 72/519 (13%)
Query: 28 NMYQAKAEGADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ QA + G+ VE+R+D + + + + + ++ LP++ R K G
Sbjct: 1066 NILQAVSFGSHAVELRVDLLKDPSSTSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQG 1125
Query: 78 GLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + L+ LA +G+++VD E+ N+L + G I++ + D
Sbjct: 1126 GLFPDNAVDEALGLYKLAIRMGSEFVDLEISFPDNLL--HAVTEIKGFSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IKL+ + + + Q + + +PIIA ++G
Sbjct: 1184 QLSWANGSWIQYYNKALQYGDVIKLIGVAKSLGDNMALQQFKAWAEKSYPIPIIAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKP 247
+G +S++L NG + S P P + + +RQ + D K F L KP
Sbjct: 1244 KGRLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTLIG-ELDAKEFALFGKP 1298
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S+ P LHN F + Y + D+++ S +F G SV P KE +M+
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 308 DEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ +G KL+GYNTD + ++DA G
Sbjct: 1359 DEISPEAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA--------GAIYLK 1410
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
G + G+GG RA + S G + +++ A F N
Sbjct: 1411 K---GESALTIGSGGTARAAIYSLHSMGYSPIYL------VGRTPANLTKLASSFPAEYN 1461
Query: 424 FQPEKGAILANATPLGMHPNT--DRVPVSEETLRDYQ-----------------LVFDAV 464
Q ++ + + P +P +E + Q ++ D
Sbjct: 1462 VQ-----VVEDIKSVQTFPKVAISTIPGDQEIAKPLQELIALIMKRSQGGSDECIILDMA 1516
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P T + + A AG IV G+E+ + Q + QF +TG
Sbjct: 1517 YKPDVTAIAQLASPAGWKIVKGLEVLVAQGVYQFEHWTG 1555
>gi|307708917|ref|ZP_07645377.1| shikimate dehydrogenase [Streptococcus mitis SK564]
gi|307620253|gb|EFN99369.1| shikimate dehydrogenase [Streptococcus mitis SK564]
Length = 284
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELRDEARLIGAVNTVVN--DNGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIF--DIDFERAKSLASDVM 412
SF + G+ L GAGGA +++ A G +++ +F + E+ + +
Sbjct: 112 FKSLPSF--TITGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKADLYALEDVSELQERIAESDLLVNATSVGMDGQSSPVPESI-NLPETILVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P E + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNSAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKY 283
>gi|237731300|ref|ZP_04561781.1| quinate/shikimate dehydrogenase [Citrobacter sp. 30_2]
gi|226906839|gb|EEH92757.1| quinate/shikimate dehydrogenase [Citrobacter sp. 30_2]
Length = 288
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 407
E G+ + G+ VL GAGGA A+ A G + + D F +A+
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKLFNRQDEFFAKAQEF 167
Query: 408 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
A+ V + + F D L IL N T +GM P + V++ +L
Sbjct: 168 ANRVNENTDCVVTVIDLADRQAFADAL----ASADILTNGTKVGMKPLENESLVTDASLL 223
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R LV + VY P T+LL+ A++AG + G M L Q QF L+TGK+ P E+++++
Sbjct: 224 RPELLVTECVYNPHMTKLLQQAQSAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQV 283
Query: 515 V 515
+
Sbjct: 284 M 284
>gi|448377077|ref|ZP_21560001.1| shikimate 5-dehydrogenase [Halovivax asiaticus JCM 14624]
gi|445656303|gb|ELZ09141.1| shikimate 5-dehydrogenase [Halovivax asiaticus JCM 14624]
Length = 291
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 133/299 (44%), Gaps = 37/299 (12%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFAGFSVGF 297
V+GL+ PVGHS P +H + + YV D L S AG +V
Sbjct: 3 VYGLLGNPVGHSLSPPMHEAAYEACEMDATYVTFEPDRDALGDAIRGAGSLGIAGLNVTI 62
Query: 298 PYKEAVMKFCDEVHP--LAQAIAAVNTII---------------RRPSDGKLIGYNTDCE 340
P+KE + D V P LA I AVNTI RP+ G+NTD
Sbjct: 63 PFKEGAI---DHVEPDELAARIGAVNTIAFPEPDAAGADDRDAVARPT-----GHNTDAA 114
Query: 341 ASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400
++ A+ +ERG+ + S A + LA GA V + +
Sbjct: 115 GAVRAL----RERGFADRDDSLDGATAVVVGAGGAGRAIAFGLA----EAGATVRVVNRT 166
Query: 401 FERAKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLV 460
ERA SLAS+V A+ D L +L NAT +GM + VP E L + +V
Sbjct: 167 VERATSLASEVPDASGHGLDGLPTLLAGATVLVNATSVGMESDESIVPT--EALHEDLVV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
DAVY PR+TRLL+DA AAGA V G M L Q F +TG++AP M + + + F
Sbjct: 225 MDAVYRPRETRLLRDATAAGATAVDGTWMLLYQGAAAFERWTGRDAPVAAMGQALRSSF 283
>gi|420263650|ref|ZP_14766286.1| shikimate dehydrogenase [Enterococcus sp. C1]
gi|394769092|gb|EJF48955.1| shikimate dehydrogenase [Enterococcus sp. C1]
Length = 282
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 44/298 (14%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I+ TK+ GLI PVGHS P ++N F ++ + +Y+ + D + + + +
Sbjct: 3 EKISGKTKLLGLIGTPVGHSGSPAMYNYGFDQLDIDAVYLAFDIKEDQVAQAIEAFRTFK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
+G +V P K A ++ DE+ P A+ + A+NTI+ +GKL+G+ TD
Sbjct: 63 MSG-NVTMPCKTAAAEYMDELTPAAKMVGAINTIVN--DEGKLVGHITDG---------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID---FERAK 405
G+ + + + + FV+ GAGGA A+ GA + IF+I +E+ K
Sbjct: 110 ---VGFVDNLQAHDVKMKDQKFVVIGAGGAATAIQVQLAIEGAASIAIFNIKDAFYEKGK 166
Query: 406 SLASDVMGAARPFE-------DILNFQPE-------KGA-ILANATPLGMHPNTDRVPVS 450
AR E DI + + KGA L NAT +GM P++
Sbjct: 167 ETV------ARIKEYYPDLVIDIYDLTDQALLAEKIKGADCLVNATTVGMGEGNTATPIA 220
Query: 451 E-ETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
+ E L V DA+Y P T+LLKDA A G V G M + Q F LFTGKE P
Sbjct: 221 DTEVLHADLTVADAIYNPPMTQLLKDASAKGCKTVGGKGMLVGQGKAAFKLFTGKELP 278
>gi|398849576|ref|ZP_10606310.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM80]
gi|398250644|gb|EJN35952.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM80]
Length = 271
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 22/262 (8%)
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN + + + +V V+D + + G +V PYK AVM D++ AQ
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMSCLDKIDESAQ 82
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNTI +G L GYNTD ++ A+++ + L+G+ + G
Sbjct: 83 VIGAVNTI--NNVEGVLTGYNTDYLGAVRALQEV--------------TELSGKRIAVIG 126
Query: 376 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 435
AGGA RA+ +G A V +F+ ER +LA D+ AR ++ F I+ NA
Sbjct: 127 AGGAARAVVYGCLQAAAEVTVFNRSIERGAALAEDL--GARWGGNVGAFAATSFDIVINA 184
Query: 436 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
T +G P ++ + + L + +V D + P +T LL A+ G V+G M + QA
Sbjct: 185 TSVGFKQPESNPL---DGVLASHLIVMDVAFMPVQTALLLQAKTLGCRTVAGTRMLVHQA 241
Query: 495 IGQFNLFTGKEAPKEFMREIVL 516
Q L+TG++AP + M + +L
Sbjct: 242 CRQIELYTGRDAPIDIMEQAML 263
>gi|409721662|ref|ZP_11269827.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
gi|448723857|ref|ZP_21706372.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
gi|445786924|gb|EMA37678.1| shikimate 5-dehydrogenase [Halococcus hamelinensis 100A6]
Length = 265
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 134/283 (47%), Gaps = 21/283 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+VFGL+ PV HS P +H + + + YV D DL+ + G +V
Sbjct: 2 QVFGLLGNPVSHSLSPPMHEAAYDELGMDARYVTFEPDESDLETAIEGARALGIEGLNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+K+AV+ CD LA I AVNT+ ++ G+NTD G
Sbjct: 62 IPFKQAVLDHCDP-DDLATRIGAVNTLDFGGE--EVTGHNTDA-------------VGVT 105
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
A PLAGR VL GAGGAGRA AF G V I + A LA V GA+
Sbjct: 106 RAFAHHDVPLAGRA-VLVGAGGAGRAAAFALADEGIEVSIANRTVGTAHDLAEAVDGASG 164
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
D L+ +L NAT +GM D PV E L V DAVY+P +TRLL+DA
Sbjct: 165 HGLDELDGLLAGADLLVNATSVGM--EGDESPVPEGALHGDLAVLDAVYSPIETRLLRDA 222
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AAGA V G M L Q + F +TG+EAP E M + A+
Sbjct: 223 RAAGATTVDGGWMLLYQGVAAFERWTGREAPIEAMNRALRARI 265
>gi|325568698|ref|ZP_08144991.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
gi|325157736|gb|EGC69892.1| shikimate dehydrogenase [Enterococcus casseliflavus ATCC 12755]
Length = 282
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 138/292 (47%), Gaps = 32/292 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPD 289
E I+ TK+ GLI PVGHS P ++N F ++ + +Y+ + D + + + +
Sbjct: 3 EKISGKTKLLGLIGTPVGHSGSPAMYNYGFDQLDIDAVYLAFDIKEDQVAQAIEAFRTFK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
+G +V P K A ++ DE+ P A+ + A+NTI+ +GKL+G+ TD
Sbjct: 63 MSG-NVTMPCKTAAAEYMDELTPAAKMVGAINTIVN--DEGKLVGHITDG---------- 109
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID---FERAK 405
G+ + + + + FV+ GAGGA A+ GA + IF+I +E+ K
Sbjct: 110 ---VGFVDNLQAHDVKMKDQKFVVIGAGGAATAIQVQLAIEGAASIAIFNIKDAFYEKGK 166
Query: 406 SLASD--------VMGAARPFEDILNFQPEKGA-ILANATPLGMHPNTDRVPVSE-ETLR 455
V+ + L + KGA L NAT +GM P+++ E L
Sbjct: 167 ETVVRIKEYYPDLVIDIYDLTDQALLAEKIKGADCLVNATTVGMGEGNTATPIADTEVLH 226
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
V DA+Y P T+LLKDA A G V G M + Q F LFTGKE P
Sbjct: 227 ADLTVADAIYNPPMTQLLKDASAKGCKTVGGKRMLVGQGKAAFKLFTGKELP 278
>gi|210610027|ref|ZP_03288206.1| hypothetical protein CLONEX_00392 [Clostridium nexile DSM 1787]
gi|210152638|gb|EEA83644.1| hypothetical protein CLONEX_00392 [Clostridium nexile DSM 1787]
Length = 291
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 142/303 (46%), Gaps = 30/303 (9%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E I T++ GL++ P+ HS P + N F + Y+ Y+ VD+ L+ +
Sbjct: 3 ERITGHTELIGLMAYPIRHSSSPAMQNEAFAKLGYDYAYLAFEVDNDTLEDAIKGLRALK 62
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G +V P K V K+ DE+ P A+ AVNTI+ +G L G+ TD + A++D
Sbjct: 63 MRGSNVSMPNKTVVHKYLDELSPAAKMCGAVNTIVN--DNGHLTGHITDGIGYMAALKDN 120
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDID-------F 401
+ G+ + GAGGA A+ A G A + IF+I
Sbjct: 121 -------------NIDVIGKKMTIVGAGGAATAIEIQAALDGVAEMSIFNIKDKFWANAE 167
Query: 402 ERAKSLASDVMGAARPFE----DILNFQPEKGAILANATPLGMHPNTDRVPVSEET-LRD 456
E K + + A ++ D L + + AN T +GM P + + +++ LR
Sbjct: 168 ETVKKINENTNCKATLYDLADLDKLKEEIADSYLFANGTGMGMKPLEGQTYIPDKSFLRP 227
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PR+T LLK A+ G ++G+ M L Q F L+TG+ P E+M+EI+
Sbjct: 228 DLIVTDVVYAPRETALLKMAKEVGCKTMNGLGMMLFQGSAAFELWTGEPMPIEYMKEILD 287
Query: 517 AKF 519
K+
Sbjct: 288 IKY 290
>gi|406981986|gb|EKE03361.1| shikimate 5-dehydrogenase [uncultured bacterium]
Length = 289
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 135/282 (47%), Gaps = 13/282 (4%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFP 298
G+I P+GH+ P++H H++ G Y+ + +DL F GF+V P
Sbjct: 4 LGIIGHPLGHTLSPVMHKAALDHLDIEGDYIALDTPPEDLVTRIKYLKVQGFKGFNVTIP 63
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
K + +EV A AVNT+I + L G NTD + I++I + ++
Sbjct: 64 LKVWITPLLNEVDEYANLAGAVNTVIIS-ENKSLYGCNTDIDGFISSIPENVRASLKSKN 122
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPF 418
A FG A R + A + + F A++ V I +I F + ++ + F
Sbjct: 123 AAVFGVGGAARAVAIGLAMIGVKEITFYARNPQKAVKIKNIIFSSFPEIKVNI----QEF 178
Query: 419 EDILNFQPEKGAILANATPLGMHP-NTDRVPVSEET---LRDYQLVFDAVYTPRKTRLLK 474
+ N +I+ N TPLG+ N D P++++ L + +V+D +Y PR+TRL+
Sbjct: 179 NEFANLG--YASIVINTTPLGLQGVNEDISPLNKKAVGGLVENTIVYDLIYKPRETRLIT 236
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
A++ G + G+EM + Q F+L+ KEAP + MRE VL
Sbjct: 237 YAKSRGLYTIDGLEMLVLQGAKAFSLWMDKEAPVDIMREAVL 278
>gi|452205994|ref|YP_007486116.1| shikimate dehydrogenase [Natronomonas moolapensis 8.8.11]
gi|452082094|emb|CCQ35345.1| shikimate dehydrogenase [Natronomonas moolapensis 8.8.11]
Length = 264
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSVG 296
+VFGLI PVGHS P +H + + YV D + + + + AG +V
Sbjct: 2 QVFGLIGNPVGHSVSPPMHEAAYEVCGMDARYVTFEPDPGSIDRVLTGADALGIAGLNVT 61
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KE V D PLA I AVNT+ DG GYNTD + A+E +
Sbjct: 62 IPFKEDVAAAVD-TDPLAGRIGAVNTVAFE--DGP-TGYNTDASGVVRALEHHDVALSGR 117
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAAR 416
G F LA G V I + ERA++LA+ V GA+
Sbjct: 118 AVVVGAGGAGRAAAFALA--------------DGGMDVHIANRTVERAEALAAAVPGASS 163
Query: 417 PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDA 476
D L +L NAT +GM ++ PV + L V DAVY P +TRLL DA
Sbjct: 164 GGLDGLTAALSGADVLVNATSVGME--SEETPVPKAALHADLAVLDAVYAPLETRLLADA 221
Query: 477 EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
GA V G M L Q + F ++TG++AP E M E
Sbjct: 222 AEVGATTVDGAWMLLFQGVEAFEIWTGRDAPVETMNE 258
>gi|448698250|ref|ZP_21698889.1| shikimate 5-dehydrogenase [Halobiforma lacisalsi AJ5]
gi|445780869|gb|EMA31739.1| shikimate 5-dehydrogenase [Halobiforma lacisalsi AJ5]
Length = 268
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 140/291 (48%), Gaps = 34/291 (11%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM--FVDDLKKFFSTYSSPDFAGFSVG 296
VFGL+ PVGHS P +H + + + YV DDL+ ++ AG +V
Sbjct: 2 DVFGLVGNPVGHSLSPPMHEVAYDALEIDARYVTFEPAPDDLETALEGAAALGIAGLNVT 61
Query: 297 FPYKE-AVMKFCDEVHPLAQAIAAVNTII---RRPSDGKLIGYNTDCEASITAIEDAIKE 352
P+KE A+ LA I AVNTI RP+ G+NTD ++ A+ +E
Sbjct: 62 IPFKEDALASDLVAADELANRIGAVNTIDFSGDRPT-----GHNTDAAGALRAL----RE 112
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 412
R + G V+ GAGGAGRA++FG GA V I + +A LA +V
Sbjct: 113 RDVT---------VDGARAVVVGAGGAGRAISFGLADAGATVSIANRTEAKAHDLADEVP 163
Query: 413 GAA----RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
GA ED+L IL NAT +GM D PV E L V DAVY P
Sbjct: 164 GATGHGLETLEDLL----ADAEILVNATSVGME--EDATPVPAEALHGGLAVLDAVYRPL 217
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
+TRLL DA AAGA V G M L Q + F L+TG++AP M E + A+
Sbjct: 218 ETRLLSDAAAAGATTVDGARMLLYQGVEAFELWTGRDAPVSTMDEALRARL 268
>gi|289550633|ref|YP_003471537.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis HKU09-01]
gi|385784261|ref|YP_005760434.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis N920143]
gi|418413937|ref|ZP_12987153.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180165|gb|ADC87410.1| Shikimate 5-dehydrogenase I alpha, AroDI alpha [Staphylococcus
lugdunensis HKU09-01]
gi|339894517|emb|CCB53798.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis N920143]
gi|410877575|gb|EKS25467.1| shikimate 5-dehydrogenase [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 271
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 132/285 (46%), Gaps = 28/285 (9%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVN----YNGIYVPMFVDDLKKFFSTYSSPDFAGFSVG 296
F +I P+ HS P++HN F+ +N Y I+VP + + + GF+V
Sbjct: 3 FAVIGDPISHSLSPLMHNANFKALNMRHTYEAIHVPR--EHFHHIKDIIAEKEIDGFNVT 60
Query: 297 FPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYK 356
P+KEA++ + D + A+ I AVNTI + GK IGYNTD GY
Sbjct: 61 IPHKEAIIPYLDVIDDTAKNIGAVNTIAIK--QGKWIGYNTDG-------------IGYV 105
Query: 357 NGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASDVMGAA 415
G + ++ GAGGA + +A K ++ I + +R S DV +
Sbjct: 106 TGLKHIYPDIEHAYILILGAGGASKGIAHELIKYVEPKITIANRTAKRFDSWTLDVNKIS 165
Query: 416 -RPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLK 474
E LN + I+ N TP+GM + V VS L LV D VY P KT L
Sbjct: 166 LETAERHLN----QFDIIINTTPVGMSQSKASV-VSLSNLSPQTLVSDIVYIPAKTPFLD 220
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
AE G I +G++MF+ Q FN++TG+ A M++ V+ K
Sbjct: 221 QAEQNGNPIYNGLDMFILQGAASFNIWTGQTANINTMKQTVINKL 265
>gi|404329984|ref|ZP_10970432.1| shikimate dehydrogenase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 304
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 132/293 (45%), Gaps = 37/293 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPM-FVDDLKKFFSTYSSPDFAG 292
I+ T+++GL + P HS P++HN +FR N +Y+ D + + G
Sbjct: 5 IDGRTRLYGLFAHPAVHSLSPLMHNLSFRRRQINAVYLAFDITSDFSDAIRSIRQLNMGG 64
Query: 293 FSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKE 352
++ P+K+ V+ + +E+ P A+ + AVNT++ R G LIG NTD T ++
Sbjct: 65 VNLSMPFKKQVIPYLNELTPTAKMVGAVNTVVHR--QGHLIGANTDG----TGFFANLRA 118
Query: 353 RGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM 412
R Y L G+ + GAGGAG ++ S G ++ F+R V
Sbjct: 119 RHYT---------LRGKTATVLGAGGAGLSIIAAGASEGLGMIHV---FKRRNVTFPKVE 166
Query: 413 GAARPFEDI---------------LNFQPEKGAILANATPLGMHPNTDRVPVSEE---TL 454
R F I L L N T +GM + +P++ E L
Sbjct: 167 AKLREFAQIYQTPILLHAYDDQTDLKRAVRASDFLINTTNIGMGNDRQSMPLTGEEMGAL 226
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
+V D +Y PRKTRLL++AEA G V+G+ M + Q F L+T +E P
Sbjct: 227 LPSSVVCDIIYEPRKTRLLQEAEARGCETVNGLGMLIYQGAQSFKLWTHEEMP 279
>gi|306829743|ref|ZP_07462932.1| shikimate dehydrogenase [Streptococcus mitis ATCC 6249]
gi|304428094|gb|EFM31185.1| shikimate dehydrogenase [Streptococcus mitis ATCC 6249]
Length = 284
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 39/299 (13%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F + NG YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATDTNGAYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF ++ + + GAGGA +++ A GA V + + E+ + D +
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGAAKSILAQAILDGASQISVFVRSVSMEKTRPYL-DKL 168
Query: 413 GAARPF-------EDILNFQPE--KGAILANATPLGMHPNTDRVPVS---EETLRDYQLV 460
F ED+ + Q + +L NAT +GM + VP S ETL LV
Sbjct: 169 QVQTGFKVDLYALEDLSDLQSRIAESDLLVNATSVGMDGKSSPVPESIVLPETL----LV 224
Query: 461 FDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
D +Y P +T LK A + V+G+ M L QA F L+TGKE P E + + ++ K+
Sbjct: 225 ADIIYQPFETPFLKWARSQDNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLIEKY 283
>gi|255941492|ref|XP_002561515.1| Pc16g12160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|327507668|sp|B6HAA7.1|ARO1_PENCW RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|211586138|emb|CAP93886.1| Pc16g12160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1586
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 220/524 (41%), Gaps = 88/524 (16%)
Query: 36 GADVVEIRLDCINNFQPGKD------------LEIILTKKPLPVLIVYRPKWAGGLYEGD 83
G+D VE+R+D + + P D + ++ + LPV+ R K GG + D
Sbjct: 1075 GSDAVELRVDLLKD--PAVDGDIPSIDYVNEQMSLLRRRTTLPVIFTIRTKSQGGRFPDD 1132
Query: 84 EHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDL 142
H L+ LA G ++VD E+ +L + + + ++ I S + T S ++
Sbjct: 1133 AHDAAMQLYRLAFRCGCEFVDLEIAFPDAML-RAVTEMKGYSKIIASHHDPKGTLSWANM 1191
Query: 143 GYLVSRMQATG-ADIIKLVFSVN--DITEIARIFQLLSH--CQVPIIAYSVGERGLVSQL 197
++ S +A D+IKLV N D R F+ + VP+IA ++G+ G +S++
Sbjct: 1192 SWIPSYNRALEYGDVIKLVGVANTLDDNNALRKFKTWAEEAHDVPLIAINMGDSGQLSRI 1251
Query: 198 LSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKV--FGLISKPVGHSKGPI 255
L NG + S P P S + + + + K F + PV S+ P
Sbjct: 1252 L----NGFMTPVSHPSLPFKAAPGQLSAAEIRRGLSLMGEIKAQKFAIFGSPVSGSRSPA 1307
Query: 256 LHNPTFRHVNYNGIYVPM---FVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312
LHN F + Y + V+D+K F +PDF G SV P K +M DEV
Sbjct: 1308 LHNTLFAKMGLPHDYSRLETTKVEDVKDFIR---APDFGGASVTIPLKLDIMPLLDEVAQ 1364
Query: 313 LAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAG 368
A+ I AVNTI+R S+G +LIGYNTD + I + +A G T S
Sbjct: 1365 EAEIIGAVNTIVRV-SNGNNPPRLIGYNTDWQGMIRCMRNA----GVYGSTGS------- 1412
Query: 369 RMFVLAGAGGAGRALAFGAKSRG--------------------------ARVVIFDIDFE 402
+ V+ G GG RA F + G RVV +
Sbjct: 1413 QSAVVIGGGGTARAAIFALHNMGFSPIYVVGRTASKLESMVSTFPTNYNIRVVDNRAQLD 1472
Query: 403 RAKSLASDVMGAARPFEDILN---FQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
+A + A RP + ++ + A + T +G +T + +++
Sbjct: 1473 TVPQVAIGTIPADRPIDPVMRETLCHMFERAQEIDGTLIGKSSDTSK----------HRV 1522
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
+ + Y P T L++ A AG + G+E+ + Q + QF +TG
Sbjct: 1523 LLEMAYKPAVTALMQLASDAGWSTIPGLEVLVGQGVHQFVHWTG 1566
>gi|19115593|ref|NP_594681.1| pentafunctional aromatic polypeptide Aro1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|15213935|sp|Q9P7R0.1|ARO1_SCHPO RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName:
Full=3-dehydroquinate synthase; Short=DHQS; Includes:
RecName: Full=3-phosphoshikimate
1-carboxyvinyltransferase; AltName:
Full=5-enolpyruvylshikimate-3-phosphate synthase;
Short=EPSP synthase; Short=EPSPS; Includes: RecName:
Full=Shikimate kinase; Short=SK; Includes: RecName:
Full=3-dehydroquinate dehydratase;
Short=3-dehydroquinase; Includes: RecName: Full=Shikimate
dehydrogenase
gi|7019762|emb|CAB75770.1| pentafunctional aromatic polypeptide Aro1 (predicted)
[Schizosaccharomyces pombe]
Length = 1573
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 216/502 (43%), Gaps = 45/502 (8%)
Query: 36 GADVVEIRLDCINNFQP----------GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85
G D +E+R+D + + + + + ++ LP++ R GGL+ D+
Sbjct: 1077 GCDAIEVRVDYLKDPKSSNGISSLDFVAEQISLLRCSTTLPIIFTIRTISQGGLFPNDKE 1136
Query: 86 KRLEALHL-AEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGY 144
+ + L L A G D+VD EL +S + Y H+ T+ I+S + T S
Sbjct: 1137 EEAKELMLSAMRYGCDFVDVELGWSSETINILYQ-HKGYTKLIMSWHDLSGTWSWARPHE 1195
Query: 145 LVSRMQ--ATGADIIKLVFSVNDITEIARI----FQLLSHCQVPIIAYSVGERGLVSQLL 198
+ +++ ++ AD+IKLV N++ + + ++ + +P+I +++G G +S++L
Sbjct: 1196 WMQKVELASSYADVIKLVGMANNLNDNLELEEFRTRITNSMDIPLILFNMGRFGQLSRIL 1255
Query: 199 SPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHINADTKVFGLISKPVGHSKGPILHN 258
+ KF + + L G TV+ L + +V + F L KP+ HS+ PILH+
Sbjct: 1256 N-KFMTPVTHPLLPSKAAPGQLTVKQLNEA-RVLIGEILPEKFFLFGKPIKHSRSPILHS 1313
Query: 259 PTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIA 318
+ + Y D + + + PDF G +V PYK +VMKF DE+ A+
Sbjct: 1314 TAYELLGLPHTYEAFETDTVDEVQKVLNLPDFGGANVTIPYKLSVMKFMDELSDEARFFG 1373
Query: 319 AVNTIIRRPSDGKLI--GYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGA 376
AVNTII KL+ G NTD +A+ G L ++ GA
Sbjct: 1374 AVNTIIPIRIGDKLVLRGDNTDWRGIYDTFANALD-----------GVSLRDTNGLVIGA 1422
Query: 377 GGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGAARPFE--DILNFQPEKGAILA 433
GG RA + G +R+ + + + + DV D N E+ + +
Sbjct: 1423 GGTSRAAIYSLHRLGVSRIYLLNRTLANSYRV-QDVFPPDYNIHIIDSDNIPSEELSSVT 1481
Query: 434 NATPLGMHPNTDRVPVSEETL--------RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVS 485
+ + P +P ++ D + D Y P T L+ A +
Sbjct: 1482 LSAVVSTIPADIELPEKVASVIKALLANKADGGVFLDMAYKPLHTPLMAVASDLEWKCCN 1541
Query: 486 GVEMFLRQAIGQFNLFTGKEAP 507
G+E +RQ + F+L+TG AP
Sbjct: 1542 GLEALVRQGLASFHLWTGMTAP 1563
>gi|334882465|emb|CCB83483.1| shikimate 5-dehydrogenase [Lactobacillus pentosus MP-10]
gi|339638180|emb|CCC17245.1| shikimate dehydrogenase 2 [Lactobacillus pentosus IG1]
Length = 296
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 13/293 (4%)
Query: 231 VEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSP 288
E I+ T + GL++ P+ HS P +HN F + N Y+ +D+ L + +
Sbjct: 2 TERIDGHTLLIGLMAYPIRHSMSPTMHNNAFAKLGLNYAYLAFEIDNKKLPSAIESIRTL 61
Query: 289 DFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIED 348
D G +V P K+ V+ D++ P A+ AVNTI+ DG L GY TD + +++D
Sbjct: 62 DMRGSNVSMPNKQKVLPLLDKLDPAAEMCGAVNTIVN--DDGVLTGYTTDGIGFMKSLDD 119
Query: 349 -AIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSL 407
I RG+K T + + V A G F ++D ++
Sbjct: 120 EGINIRGHKM-TLAGAGGAGTAIAVQAALDGVKEMSIFNLHDAEWENAQHNVDLINERTS 178
Query: 408 ASDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRDYQLVFDAV 464
+ A ED +F+ E I +AT +GM P D+ V + + LR +VFD V
Sbjct: 179 CHATLHA---LEDRDDFKKEIQDSFIYTDATGVGMKPLEDKTLVDDPSWLRKDLVVFDTV 235
Query: 465 YTPRKTRLLKDAEAAGA-IIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
Y PR T+L+K A+ AG + +G+ M L Q F L+TG++ P +++R I+
Sbjct: 236 YAPRTTKLMKVAQEAGVEHVFNGLGMMLEQGAAAFKLWTGEDMPVDYIRHILF 288
>gi|254466135|ref|ZP_05079546.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
gi|206687043|gb|EDZ47525.1| shikimate 5-dehydrogenase [Rhodobacterales bacterium Y4I]
Length = 277
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 129/272 (47%), Gaps = 17/272 (6%)
Query: 236 ADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGF 293
A + G+I PV HSK P LH + G YVPM V+ DL + F G
Sbjct: 4 AKIPLAGVIGCPVSHSKSPQLHGHWLKTHRIAGHYVPMHVEPADLAEAIRAMPKMGFVGA 63
Query: 294 SVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKER 353
+V P+KEAVM D+V A+ I A NT+I R DG ++ NTD +T + +
Sbjct: 64 NVTIPHKEAVMGIADKVTDRAKLIGAANTLIFR-EDGTILADNTDGYGFVTNLHQGAPDW 122
Query: 354 GYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVM 412
++G A V+ GAGGA RA+ G +++ + ERA+ L D
Sbjct: 123 DPQSGPA-----------VVLGAGGACRAVVASLIEAGVPEILLSNRTRERAEQLQKDFG 171
Query: 413 GAARPFEDILNFQP-EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTR 471
R E + E+G ++ N T LGM R+ V + LR +V D +Y P KT
Sbjct: 172 NRIRVVEWLQAGNAIEEGRLIVNTTSLGM-VGKPRLRVPLDGLRSDAVVTDLIYAPLKTG 230
Query: 472 LLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
LL+ AE AG +V G+ M L QA+ F + G
Sbjct: 231 LLETAEEAGCTVVDGLGMLLHQAVPGFERWFG 262
>gi|417934921|ref|ZP_12578241.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. F0392]
gi|340771491|gb|EGR94006.1| shikimate dehydrogenase [Streptococcus mitis bv. 2 str. F0392]
Length = 284
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRMAAVVANPIKHSISPFIHNKAFEATAANGVYVAWEIEAGDLAETIANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF ++ + + GAGGA +++ A GA V + + E+ + +
Sbjct: 112 FKSLPSFA--ISDKKMTILGAGGAAKSILAQAILDGASQISVFVRSVSMEKTRPYLDKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 KQTGFKVDLYALEDVSKLQARIAESDLLVNATSVGMDGQSFPVPESI-NLPENLLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDQIWQSLTEKY 283
>gi|332653770|ref|ZP_08419514.1| shikimate dehydrogenase [Ruminococcaceae bacterium D16]
gi|332516856|gb|EGJ46461.1| shikimate dehydrogenase [Ruminococcaceae bacterium D16]
Length = 407
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 42/278 (15%)
Query: 242 GLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKE 301
GLI + +GHS P +H+ NY +P+ +++ F +F G +V PYK+
Sbjct: 4 GLIGRKLGHSFSPKIHSLLG---NYPYRLIPLEPEEVGDFLR---KGEFHGLNVTIPYKK 57
Query: 302 AVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTAS 361
VM++C E+ P A+ I + NTI+RRP DG L+G NTD + + ++ A
Sbjct: 58 TVMEYCAELTPAARRIGSANTILRRP-DGTLLGDNTDYDGFLYLLKSA------------ 104
Query: 362 FGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDI 421
G+ + GR ++ G+GGA S R V+ ++ A +++ +R E+
Sbjct: 105 -GAQVEGRKALVLGSGGA---------SLTVRSVLSELG-------AREIITISRSGEN- 146
Query: 422 LNFQP----EKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAE 477
N+Q I+ NATP+GM+P PV + + VFD +Y P KT+LL A+
Sbjct: 147 -NYQNLDRHADAQIIVNATPVGMYPGNGVSPVDLDQFPQCEGVFDLIYNPSKTQLLLQAQ 205
Query: 478 AAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
G I +G+ M + QA F GK+ P E + +I
Sbjct: 206 RRGLIWGNGLGMLVAQAKAASERFQGKKLPDELVADIT 243
>gi|289522730|ref|ZP_06439584.1| shikimate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504566|gb|EFD25730.1| shikimate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 290
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 35/295 (11%)
Query: 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV---DDLKKFFSTYSSPDFA 291
NADT+ + P+ + P+LHN F N +Y P+ + +DL K T +
Sbjct: 5 NADTRYVVIFGNPLKQTLSPLLHNTVFESKKMNNLYYPLEIQSLEDLSKALKTMHVFNVI 64
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V PYKE V++ D + A+ AVNTI+ ++ LIGYNTD + + +
Sbjct: 65 GANVTMPYKEKVIELLDGLDKSAEQCGAVNTIVT--TEKGLIGYNTDGMGFLNSFMEE-- 120
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
S SP G+ +L GAGGA +A+ F + G ++V++++ RA SL
Sbjct: 121 ---------SNVSP-EGKTLLLIGAGGAAKAVVFAFLNAGVSKVIVYNNSQTRAMSLVER 170
Query: 411 V------MGAARPFEDILNFQP------EKGAILANATPLGMHPNTD-RVPVSEETLRDY 457
V RP LN +P + I+ NAT +GM + + V ++ R
Sbjct: 171 VEKFFPGKSEWRP----LNNKPVPPEGIAEADIIINATKVGMKGEAEGQSLVLPDSFRPG 226
Query: 458 QLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
Q V D VY P +T+LL D++ AG +SG M + QA F L+ G ++ E M+
Sbjct: 227 QFVCDVVYNPPETKLLADSKKAGCKTLSGDGMLVYQAAAAFKLWFGVDSDLELMK 281
>gi|307706840|ref|ZP_07643643.1| shikimate dehydrogenase [Streptococcus mitis SK321]
gi|307617781|gb|EFN96945.1| shikimate dehydrogenase [Streptococcus mitis SK321]
Length = 284
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 140/306 (45%), Gaps = 53/306 (17%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG YV + DDL+ + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEVTATNGAYVAWEIEADDLEVTVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + D + A+ I AVNT++ +G LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDVLSDEARLIGAVNTVVNE--NGNLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAA 415
SF ++G+ L GAGGA +++ A G + F R+ S M
Sbjct: 112 FKSLPSF--TISGKKMTLLGAGGAAKSILAQAILDGVSQISV---FVRSVS-----MEKT 161
Query: 416 RPFEDILNFQ-------------PEKGA------ILANATPLGMHPNTDRVP---VSEET 453
RP+ D L Q PE A +L NAT +GM + VP V ET
Sbjct: 162 RPYLDKLQEQTGFKVDLYALEDVPELQARIAGADLLVNATSVGMDGQSSPVPENIVLPET 221
Query: 454 LRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
L LV D +Y P +T LK A G +V+G+ M L QA F L+TGKE P E + +
Sbjct: 222 L----LVADIIYQPFETSFLKWARNQGNPVVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQ 277
Query: 514 IVLAKF 519
+ K+
Sbjct: 278 SLTEKY 283
>gi|317968332|ref|ZP_07969722.1| shikimate 5-dehydrogenase [Synechococcus sp. CB0205]
Length = 303
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 137/315 (43%), Gaps = 36/315 (11%)
Query: 224 SLRQTYKVE-HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKK 280
S R T E I T + G++ PV HS P++HN + + Y+ P +L
Sbjct: 6 SARTTVNAEARIQGSTALVGVLGDPVRHSLSPVMHNVALEAMGLDWAYLALPTPTAELGT 65
Query: 281 FFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCE 340
+ G +V P+K+AV C E+ PLA+ + AVNT++ R G L G NTD E
Sbjct: 66 VVQALEAMGCRGLNVTIPHKQAVAALCSELSPLAERLGAVNTLVPRQGGGWL-GTNTDVE 124
Query: 341 ASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDI 399
+ + S+ S R VL G GG+ RA+ G G A +V+
Sbjct: 125 GFCAPLRE-----------VSWSSK---RALVL-GCGGSARAVVAGLVELGFAEIVLAGR 169
Query: 400 DFERAKSLASDVMGAARPFEDILNFQPEKGAILA------NATPLGMHPNTDRVPVSEET 453
E ++ +D A P L++ A LA N TP+GM TD
Sbjct: 170 RPEVLEAFQADCRSWA-PQLSTLSWDSGIAATLAQADLLVNTTPVGMASATDPAAAQACP 228
Query: 454 LRDYQL--------VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGK- 504
L D +L V+D +YTPR T LL+ A A G + G+ M + Q L++G+
Sbjct: 229 LSDSELAALSAEAWVYDLIYTPRPTALLQRATAKGCRSLDGLRMLVEQGAASLRLWSGRS 288
Query: 505 EAPKEFMREIVLAKF 519
E P E M + L +
Sbjct: 289 EVPVEVMHQAALRQL 303
>gi|409043576|gb|EKM53058.1| hypothetical protein PHACADRAFT_210784 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1377
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 225/531 (42%), Gaps = 80/531 (15%)
Query: 36 GADVVEIRLDCI------NNFQP--------GKDLEIILTKKPLPVLIVYRPKWAGGLY- 80
G D VE+R+D + +F+P + + + K LP++ R GG +
Sbjct: 868 GVDAVEVRVDLLRSPVDTESFEPYIPPTAYVCEQIAALRQKTNLPIVFTCRTVSQGGSFP 927
Query: 81 EGDEHKRLEALHLAEDLGADYVDFEL----KVASNILGKQYSSHQSGTRFIVSCNLDCET 136
+ E + + H A LG +Y+D EL K ++ ++ SS + S N T
Sbjct: 928 DTAEKQAFDLFHAALRLGVEYIDVELTWSKKQIDALVQRKGSSQIIASYHDWSGNFKWGT 987
Query: 137 PSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLL-----SHCQVPIIAYSVGER 191
+D+ R A G DI+K+V N+ + +++ + + PIIA ++G
Sbjct: 988 AQSKDV---YDRAAAFG-DIVKIVGKANNFEDNFSLYRFVEERTKADGSKPIIAINMGVE 1043
Query: 192 GLVSQLLSPKFNGALVYGSLKGTPVLG--LPTVESLRQTYKVEHINA-------DTKVFG 242
G S++L+ F +PV LP+ + Q V+ NA +K F
Sbjct: 1044 GQTSRILNKTF-----------SPVTHPLLPSKAAPGQLSFVQIQNALNLLGLLPSKRFF 1092
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDL-KKFFSTYSSPDFAGFSVGFPYKE 301
L P+ S P +HN + + Y + + + ++ + + P+F G SV PYK
Sbjct: 1093 LFGNPISQSMSPTIHNTAHEILGFPHKYELLETETVGEEIKAAVTLPEFGGASVTIPYKL 1152
Query: 302 AVMKFCDEVHPLAQAIAAVNTII---RRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
V+ D + P A+A+ AVNTI+ R L G NTD I +
Sbjct: 1153 DVIPLLDTLSPHAEAVGAVNTIVPIKREDGSTVLHGENTDWVGMRECIVSHL-------- 1204
Query: 359 TASFGSPLAGRMF---VLAGAGGAGRALAFGAKSRGAR-VVIFDIDFERAKSLASDVMGA 414
P+ GR ++ GAGG RA + KS + + +F+ A++LA
Sbjct: 1205 ------PVTGRSIEAALVIGAGGTSRAAIYALKSLSVKNIYLFNRTRASAEALALTFSDT 1258
Query: 415 ARPFEDILNFQPEKGA--------ILANATPLGMHP-NTDRVPVSEETLRDYQLVFDAVY 465
+ L PE + + A+AT L + N +P S +V D Y
Sbjct: 1259 NVKIVEKLGVWPEGASPPSVVISTVPASATTLDLSATNALYLPSSVLDKSVQGVVVDMAY 1318
Query: 466 TPRKTRLLKDAEAAGAI-IVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
P T LL+ A A + IV G+++ L Q QF L+TG+EAPK + E+V
Sbjct: 1319 RPAVTPLLELASKADSWKIVRGLDVLLEQGFAQFKLWTGREAPKSKVAEVV 1369
>gi|421844137|ref|ZP_16277296.1| quinate/shikimate 5-dehydrogenase, NAD(P)-binding protein
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411775044|gb|EKS58512.1| quinate/shikimate 5-dehydrogenase, NAD(P)-binding protein
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455646342|gb|EMF25369.1| quinate/shikimate 5-dehydrogenase, NAD(P)-binding protein
[Citrobacter freundii GTC 09479]
Length = 288
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 137/301 (45%), Gaps = 38/301 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 407
E G+ + G+ VL GAGGA A+ A G + + D F +A+
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKLFNRQDEFFAKAQEF 167
Query: 408 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
A V + + F D L IL N T +GM P + V++ +L
Sbjct: 168 AKRVNENTDCVVTVIDLADRQAFADAL----ASADILTNGTKVGMKPLENESLVTDASLL 223
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREI 514
R LV + VY P T+LL+ A++AG + G M L Q QF L+TGK+ P E+++++
Sbjct: 224 RPELLVTECVYNPHMTKLLQQAQSAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQV 283
Query: 515 V 515
+
Sbjct: 284 M 284
>gi|312621914|ref|YP_004023527.1| shikimate 5-dehydrogenase [Caldicellulosiruptor kronotskyensis
2002]
gi|312202381|gb|ADQ45708.1| shikimate 5-dehydrogenase [Caldicellulosiruptor kronotskyensis
2002]
Length = 288
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 243 LISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD---LKKFFS-TYSSPDFAGFSVGFP 298
LI K + HS P +HN + + IY + + D LK+F D GF++ P
Sbjct: 6 LIGKSLKHSISPFIHNRILSEFDIDAIYSNLELLDTEKLKEFVEMVRKDEDVVGFNITIP 65
Query: 299 YKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNG 358
YKE ++KFCDEV + I A NT+ + + KL+ YNTD G+K
Sbjct: 66 YKEDILKFCDEVSEDVRIIKAANTV--KKENEKLLAYNTDW-------------IGFKRS 110
Query: 359 TASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFERAKSLASDVMGAAR- 416
+ + ++ G+GGA +A +G GA V + + +E+A+SL +
Sbjct: 111 LEDMEVDVKDKKILVLGSGGAAKACIYGLYRMGAEEVFVANRTYEKAESLKETFQNILKI 170
Query: 417 -PFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDY-----QLVFDAVYTPRKT 470
P E I ++ K I+ N T +GM PN + P E +Y V+D +Y P KT
Sbjct: 171 VPVEWIRRYEF-KYDIIINTTSVGMFPNIESSPFDFE---NYVAGIPVFVYDMIYNPLKT 226
Query: 471 RLLKDAEAAGAIIVSGVEMFLRQAI 495
LK+AE G I +G++M + QAI
Sbjct: 227 AFLKEAEKKGIKIENGLKMLVYQAI 251
>gi|343525459|ref|ZP_08762414.1| putative shikimate dehydrogenase [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343395729|gb|EGV08267.1| putative shikimate dehydrogenase [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 250
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 125/259 (48%), Gaps = 35/259 (13%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ T++ +++ P+ HS P +HN F NG+YV + DDLK +
Sbjct: 3 IDGYTRLAAVVANPIKHSISPFIHNAAFEQAGVNGVYVAWEISEDDLKTTVENIRRYNMF 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G ++ PYK+AV+ F DE+ P AQ I AVNT++ + +GKLIGYNTD
Sbjct: 63 GINLSMPYKQAVIPFLDELTPAAQMIGAVNTVVNQ--NGKLIGYNTDG------------ 108
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIF--DIDFERAKSLA 408
+G+ SF + G+ ++ GAGGA A+ A G + +F FER
Sbjct: 109 -KGFFMSLPSF--VIKGKKMLILGAGGAATAIIVQAVLEGVDEIFVFTRKTSFERVSQQM 165
Query: 409 SDVMGAAR------PFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQ-- 458
+ AA P E ++L + A+L N T LGM T VP +T+R +
Sbjct: 166 KQIQQAASTKISVLPLEQRELLQEKLNASALLVNGTSLGMDEKTSPVP---DTIRLSKSL 222
Query: 459 LVFDAVYTPRKTRLLKDAE 477
LV D +Y P +T LK A+
Sbjct: 223 LVADVIYQPFETPFLKWAK 241
>gi|320528873|ref|ZP_08029965.1| shikimate 5-dehydrogenase [Selenomonas artemidis F0399]
gi|320138503|gb|EFW30393.1| shikimate 5-dehydrogenase [Selenomonas artemidis F0399]
Length = 286
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK+ G++ P+ HS P+L N R + +YV P+ + L+
Sbjct: 2 ITGRTKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKREALRSAVLGLRDAGVC 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K ++ D + A+ I AVNT++ +DG+L G+NTD
Sbjct: 62 GFNVTIPFKTEIIAVLDALDEDARRIGAVNTVVV-GADGRLTGHNTDAA----------- 109
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASD 410
G+ G + G L G V+ GAGGA RA+ G GA V + + + + L +D
Sbjct: 110 --GFLAGFTACGVSLRGAHAVVFGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCAD 167
Query: 411 VM--GAARPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 464
G R F D F+ G+ +L TPLGM P+ + +P V + V+D +
Sbjct: 168 FAADGGVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLI 227
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
YTP +TR L++A G V+G M Q F L+TG +MR ++
Sbjct: 228 YTPAETRFLREAARRGHRCVNGETMLAAQGAEAFFLWTGVRPDLVYMRRVL 278
>gi|392957244|ref|ZP_10322768.1| shikimate 5-dehydrogenase [Bacillus macauensis ZFHKF-1]
gi|391876651|gb|EIT85247.1| shikimate 5-dehydrogenase [Bacillus macauensis ZFHKF-1]
Length = 281
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 29/288 (10%)
Query: 239 KVFGLISKPVGHSKGPILHNPTFRH----VNYNGIYVPMFVDDLKKFFSTYSSPDFAGFS 294
++ GL+ PV HS P + N F Y VP + L++ + + G +
Sbjct: 3 QLTGLLGYPVHHSVSPQMQNAAFNEQGLSFEYEKFNVP--PEQLQQAVEALKTFHYKGCN 60
Query: 295 VGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERG 354
V P+K AVM F DE+ A+ I AVNTI+ +G L+GYNTD + +E + R
Sbjct: 61 VTIPHKTAVMPFLDEISEEARRIGAVNTIVNE--NGVLVGYNTDGAGFVKGVERLMNRRI 118
Query: 355 YKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDIDFERAKSLASDVMG 413
T ++ GAGGA RA+ + ++ +VV I + +A +A+D +
Sbjct: 119 SSQDT-----------ILVIGAGGASRAICYALANKNPKVVAIANRTEAKATQIANDCL- 166
Query: 414 AARPFEDILNFQPEKG-----AILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPR 468
R + +L+ Q + I+ N T +GM+ + D +P+S L + V D +Y P
Sbjct: 167 --RESDVVLSLQQAEEQLASFGIVINTTSMGMNED-DPLPLSLTHLNEGTYVIDIIYNPF 223
Query: 469 KTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+T+ L A+ GAII +GV M + Q F +TGKE M +IV+
Sbjct: 224 QTKWLTLAKEKGAIIDNGVAMLVFQGALAFTKWTGKEPNVSLMEQIVV 271
>gi|326471134|gb|EGD95143.1| hypothetical protein TESG_02636 [Trichophyton tonsurans CBS 112818]
Length = 1570
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 213/519 (41%), Gaps = 72/519 (13%)
Query: 28 NMYQAKAEGADVVEIRLDCI-----NNFQP-----GKDLEIILTKKPLPVLIVYRPKWAG 77
N+ QA + G+ VE+R+D + N+ P + + + ++ LP++ R K G
Sbjct: 1066 NILQAVSFGSHAVELRVDLLKDPSSNSAIPSISYVAEQISFLRSQVSLPLIFTIRTKAQG 1125
Query: 78 GLYEGDEHKRLEALH-LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCET 136
GL+ + L+ LA +G+++VD E+ N+L + G I++ + D
Sbjct: 1126 GLFPDNAVDEALGLYKLAIRMGSEFVDLEISFPDNLL--HAVTEIKGFSKIIASHHDVNG 1183
Query: 137 PSEEDLGYLVSRMQAT--GADIIKLVFSVNDITEIARIFQLLSHCQ----VPIIAYSVGE 190
G + D+IK + + + + Q + + +PI+A ++G
Sbjct: 1184 QLSWANGSWIQYYNKALQYGDVIKFIGVAKSLGDNMALQQFKAWAEKSYPIPIVAINMGN 1243
Query: 191 RGLVSQLLSPKFNGALVYGSLKGTPVLGLP---TVESLRQTYKVEHINADTKVFGLISKP 247
+G +S++L NG + S P P + + +RQ + D K F L KP
Sbjct: 1244 KGCLSRIL----NGFMTPVSHPALPFKAAPGQLSAKEIRQALTLIG-ELDAKEFALFGKP 1298
Query: 248 VGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFC 307
+ S+ P LHN F + Y + D+++ S +F G SV P KE +M+
Sbjct: 1299 ISASRSPALHNTLFAEAGFPHEYGRLETDNVEDVKEFIYSEEFGGASVTIPLKERIMELL 1358
Query: 308 DEVHPLAQAIAAVNTIIRRPSDG----KLIGYNTDCEASITAIEDAIKERGYKNGTASFG 363
DE+ P A+ I AVNTI+ +G KL+GYNTD + ++DA G
Sbjct: 1359 DEISPEAKIIGAVNTIVPIIEEGKATRKLVGYNTDWQGMARCLKDA--------GAIYLK 1410
Query: 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILN 423
G + G+GG RA + S G + +++ A F N
Sbjct: 1411 K---GESALTIGSGGTARAAIYSLHSMGYSPIYL------VGRTPANLTKLASSFPAEYN 1461
Query: 424 FQPEKGAILANATPLGMHPNT--DRVPVSEETLRDYQ-----------------LVFDAV 464
Q ++ + + P +P +E + Q ++ D
Sbjct: 1462 VQ-----VVEDIKSVQTFPKVAISTIPGDQEIAKPLQELIALIMKRSQGGSDECIILDMA 1516
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P T + + A AG IV G+E+ + Q + QF +TG
Sbjct: 1517 YKPDVTAIAQLASPAGWKIVKGLEVLVAQGVYQFEHWTG 1555
>gi|271499360|ref|YP_003332385.1| Shikimate dehydrogenase substrate-binding domain-containing protein
[Dickeya dadantii Ech586]
gi|270342915|gb|ACZ75680.1| Shikimate dehydrogenase substrate binding domain protein [Dickeya
dadantii Ech586]
Length = 288
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 137/299 (45%), Gaps = 38/299 (12%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
+ A ++ GL++ P+ HS P + N V Y+ VD+ + + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEEVGLPYTYMAFEVDNTTFPQAIAGLKALKMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G V P K+ + DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACDYVDELTPAAKLVGAINTIVN--DDGYLKGYNTDGTGHIRAI----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF----DIDFERAKSL 407
E G+ + G+ VL GAGGA A+ A G + + D +E+A +
Sbjct: 117 ESGFD---------IKGKTMVLVGAGGASTAIGAQAAIEGIKAIKLFNRRDEFYEKALAF 167
Query: 408 ASDV------------MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETL- 454
A V +G + F D + IL N T LGM P + V++++L
Sbjct: 168 AKRVNDNTDCIVTVHDLGDQQAFADAI----ASADILTNGTKLGMKPLENESIVTDKSLL 223
Query: 455 RDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMRE 513
R LV + VY P T+LL+ A AG + G M L Q QF L+TGK+ P E++++
Sbjct: 224 RPGLLVTECVYNPHITKLLQMAMDAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYIKK 282
>gi|417794869|ref|ZP_12442104.1| shikimate dehydrogenase [Streptococcus oralis SK255]
gi|334266731|gb|EGL85203.1| shikimate dehydrogenase [Streptococcus oralis SK255]
Length = 284
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASDVMGA 414
SF ++ + + GAGGA +++ A G +++ +F + S M
Sbjct: 112 FKSLPSF--TISDKKMTILGAGGAAKSILAQAILDGISQISVF---------VRSVSMKK 160
Query: 415 ARPF-----------------EDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLR 455
RP+ ED+ Q + K +L NAT +GM + VP S L
Sbjct: 161 TRPYLDKLQEQTGFKVDLYALEDLSELQEKIAKSDLLVNATSVGMDGQSSPVPESI-NLP 219
Query: 456 DYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
+ LV D +Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + +
Sbjct: 220 EALLVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSL 279
Query: 516 LAKF 519
K+
Sbjct: 280 TEKY 283
>gi|270292497|ref|ZP_06198708.1| shikimate dehydrogenase [Streptococcus sp. M143]
gi|270278476|gb|EFA24322.1| shikimate dehydrogenase [Streptococcus sp. M143]
Length = 284
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVD--DLKKFFSTYSSPDFAGFSV 295
T++ +++ P+ HS P +HN F NG+YV ++ DL + + G ++
Sbjct: 7 TRLAAVVANPIKHSISPFIHNRAFEATATNGVYVAWEIEAGDLAETVANIRRYQMFGINL 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
PYKE V+ + DE+ A+ I AVNT++ + DG LIGYNTD +G+
Sbjct: 67 SMPYKEQVIPYLDELSDEARLIGAVNTVVNQ--DGTLIGYNTDG-------------KGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDIDFERAKSLASDVM 412
SF ++ + + GAGGA +++ A G V + + E+ + + +
Sbjct: 112 FKSLPSFA--ISDKKMTILGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLAKLQ 169
Query: 413 GAA------RPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDAV 464
ED+ Q + +L NAT +GM + VP S L + LV D +
Sbjct: 170 EQTGFKVDLYALEDVSELQSRIAESDLLVNATSVGMDGQSSPVPESI-NLPEALLVADII 228
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVLAKF 519
Y P +T LK A + G V+G+ M L QA F L+TGKE P + + + + K+
Sbjct: 229 YQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTDEIWQSLTEKY 283
>gi|398899911|ref|ZP_10649237.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM50]
gi|398181938|gb|EJM69476.1| shikimate 5-dehydrogenase [Pseudomonas sp. GM50]
Length = 272
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 251 SKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310
S G +HN + H+ +V V+D + G +V PYK AVM+ DE+
Sbjct: 18 SLGEKIHNAAYDHLGLEYRFVCFGVEDPAAAVQAIRTLGVRGMNVSMPYKTAVMEHLDEI 77
Query: 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRM 370
AQ I AVNTI DG L GYNTD S+ A+ + I P R+
Sbjct: 78 DEAAQVIGAVNTI--NNVDGVLTGYNTDYLGSLAALREVI-------------DPTDRRV 122
Query: 371 FVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGA 430
V+ GAGGA RA+ +G GA V +F+ R + LA + + I +F +
Sbjct: 123 AVI-GAGGAARAVVYGCLQTGAHVTVFNRSAARGRDLAQSL--GIQYGGGIEDFLASEFD 179
Query: 431 ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMF 490
I+ NAT +G T V E L + +V D + P +T L+ A G + VSG M
Sbjct: 180 IVINATSVGFRQPT--VNPLEGRLASHLVVMDVAFIPAQTALIGQARQLGCVTVSGTRML 237
Query: 491 LRQAIGQFNLFTGK-EAPKEFMREIVLAKF 519
+ QA Q L+TG EAP E M +L +
Sbjct: 238 VHQARKQIELYTGHYEAPLEVMEHAMLQEI 267
>gi|365838921|ref|ZP_09380176.1| shikimate dehydrogenase [Anaeroglobus geminatus F0357]
gi|364566130|gb|EHM43830.1| shikimate dehydrogenase [Anaeroglobus geminatus F0357]
Length = 292
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 30/300 (10%)
Query: 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPD 289
E + T++ GLI+ P+ HS P +HN F+ + + +YV VD+ L+ +
Sbjct: 8 ERVTGHTELIGLIAYPIRHSMSPTMHNEAFKKLGLDYVYVCFEVDNSTLEDTVKGLRAMK 67
Query: 290 FAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDA 349
G++V P K + ++ D++ P++Q + A NT++ +G L G TD ++ +
Sbjct: 68 VRGWNVSMPNKGPITRYLDKLSPVSQIVGACNTVVN--DNGVLTGTITDGTGAM----QS 121
Query: 350 IKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAK 405
+KE G + G+M V+ GAGGA A+ A GA+ + +F D F +A+
Sbjct: 122 LKEEGV--------DYVGGKMTVV-GAGGAATAIIVQAALDGAKEITVFNRRDEFFPKAE 172
Query: 406 SLA------SDVMGAARPFEDILNFQPE--KGAILANATPLGMHPNTDRVPVSEET-LRD 456
+ +D D N + E I + T GM P D V + +++ L
Sbjct: 173 KVVAQLNDRTDCKVTLYDLADHENLKRELDSSDIYIDGTSCGMKPLEDVVAIPDKSYLHK 232
Query: 457 YQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
+V D VY PR+T+L++ AE G +G+ M L Q F L+TGK+ P +++++I+
Sbjct: 233 ELIVMDTVYAPRETKLMRWAEEVGCHTFNGLGMMLYQGAAAFKLWTGKDMPVDYIKDILF 292
>gi|325852020|ref|ZP_08171103.1| putative shikimate dehydrogenase [Prevotella denticola CRIS 18C-A]
gi|327312413|ref|YP_004327850.1| putative shikimate dehydrogenase [Prevotella denticola F0289]
gi|325484576|gb|EGC87492.1| putative shikimate dehydrogenase [Prevotella denticola CRIS 18C-A]
gi|326944488|gb|AEA20373.1| putative shikimate dehydrogenase [Prevotella denticola F0289]
Length = 250
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 241 FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTY-SSPDFAGFSVGFPY 299
+GLI P+GHS N F + + N Y+ + + F S+P+ G +V PY
Sbjct: 4 YGLIGYPLGHSFSIGYFNEKFHNEHINAAYINFEIPSIDDFIEVVDSNPELRGLNVTIPY 63
Query: 300 KEAVMKFCDEVHPLAQAIAAVNTI--IRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
KE V+ + D + P A+AI AVN I + S L G+N+D +IE + ER +
Sbjct: 64 KEQVIDYLDSLSPEAKAIGAVNVIRVTHKGSKTLLKGFNSDVIGFTRSIEPLL-ERHH-- 120
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVM--GAA 415
R ++ G GGA +A+ +G KS G +F +R L D + G
Sbjct: 121 -----------RKALILGTGGASKAVNYGLKSLGLET-MFVSRTKRNGVLTYDEITPGIV 168
Query: 416 RPFEDILNFQPEKGAILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAVYTPRKTRLLK 474
R + ++ N TPLGM+P TD P + E + + L++D +Y P +T +
Sbjct: 169 REYN-----------VIVNCTPLGMYPKTDVCPALPYEAMDSHTLLYDLLYNPDETLFMA 217
Query: 475 DAEAAGAIIVSGVEMFLRQAIGQFNLFTGKE 505
GA++ +G+EM L QA + + GKE
Sbjct: 218 KGREQGAVVKNGLEMLLLQAFASWEFWNGKE 248
>gi|420366577|ref|ZP_14867414.1| shikimate / quinate 5-dehydrogenase family protein [Shigella
flexneri 1235-66]
gi|391324093|gb|EIQ80704.1| shikimate / quinate 5-dehydrogenase family protein [Shigella
flexneri 1235-66]
Length = 288
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 30/297 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDD--LKKFFSTYSSPDFA 291
+ A ++ GL++ P+ HS P + N Y+ VD+ + +
Sbjct: 3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNSTFANAIAGLKALKMR 62
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G V P K+ ++ DE+ P A+ + A+NTI+ DG L GYNTD I AI K
Sbjct: 63 GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAI----K 116
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIF---DIDFERAKSL 407
E G+ + G+ VL GAGGA A+ A G + + IF D F +A++
Sbjct: 117 ESGFD---------IKGKTMVLLGAGGASTAIGAQAAIEGIKEIKIFNRKDEFFAKAQAF 167
Query: 408 ASDVMGAARPFEDILNFQPEKG--------AILANATPLGMHP-NTDRVPVSEETLRDYQ 458
A V +++ + IL N T +GM P + + + LR
Sbjct: 168 AKRVNENTDCVVTVIDLADRQAFAEALASADILTNGTKVGMKPLDNESIVTDVSLLRPEL 227
Query: 459 LVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
LV + VY P TRLL+ A+ AG + G M L Q QF L+TGK+ P E++++++
Sbjct: 228 LVTECVYNPHMTRLLQQAQHAGCKTIDGYGMLLWQGAEQFKLWTGKDFPLEYVKQVM 284
>gi|373464004|ref|ZP_09555572.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
gi|371763400|gb|EHO51877.1| shikimate dehydrogenase [Lactobacillus kisonensis F0435]
Length = 289
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 31/288 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I+ TK+FGL++ P HS P++HN +F+ NG Y+ V D L + +
Sbjct: 2 IDGHTKLFGLLAHPAAHSLSPLIHNTSFKITGINGAYLAFDVTSDGLADSLAAMRAMGIG 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF++ P K V+ DEV P A+ + AVNT+I R +G L G +TD + + DA+K
Sbjct: 62 GFNLSMPLKTDVIPLLDEVTPRAERLQAVNTVINR--NGHLTGDSTDGQGFV----DALK 115
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFERAKSLASD 410
+R + LAG + GAGGAGR++ A G ++ +F + +
Sbjct: 116 QRAIE---------LAGATLTVLGAGGAGRSIISAAVDAGVTKIHVFKRNNASFMPVKHQ 166
Query: 411 VMGAARPFEDILNFQPEKGAILA--------NATPLGMHPNTDRVPVSEETLRDYQ---L 459
+ + E + ++ E I A NAT LGM +++ +P+++ + ++ +
Sbjct: 167 LEAWSTAIE-VTDYDDEAAMIHAVDTSQIVVNATNLGMAADSE-LPINQAVIDHFKPEHV 224
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAP 507
V D +Y P T L A+ G+ +G+ M + QA G F +TG++ P
Sbjct: 225 VVDVIYFPLTTPFLVAAKKRGSHTYNGIGMLVHQAAGSFLEWTGQKMP 272
>gi|402302379|ref|ZP_10821493.1| shikimate dehydrogenase [Selenomonas sp. FOBRC9]
gi|400380598|gb|EJP33412.1| shikimate dehydrogenase [Selenomonas sp. FOBRC9]
Length = 286
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYV--PMFVDDLKKFFSTYSSPDFA 291
I TK+ G++ P+ HS P+L N R + +YV P+ + L+ F
Sbjct: 2 ITGRTKLLGVLGAPIEHSLSPVLQNAALRAAGLDYVYVALPVKREALRSAVLGLRDAGFC 61
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K ++ D + A+ I AVNT++ +DG+L G+NTD
Sbjct: 62 GFNVTIPFKTEIIAVLDTLDEDARRIGAVNTVVV-GADGRLTGHNTDTA----------- 109
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFERAKSLASD 410
G+ G + G L G V+ GAGGA RA+ G GA V + + + + L +D
Sbjct: 110 --GFLAGFTACGVSLRGAHAVVFGAGGAARAVLCGLLRAGAAQVSIGVRNLVKGEKLCAD 167
Query: 411 VM--GAARPFE-DILNFQPEKGA--ILANATPLGMHPNTDRVP-VSEETLRDYQLVFDAV 464
G R F D F+ G+ +L TPLGM P+ + +P V + V+D +
Sbjct: 168 FAADGDVRAFRFDDAAFRARLGSADVLVQTTPLGMSPHPEEMPPVDWAVVHPAAFVYDLI 227
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIV 515
YTP +TR L++A G V+G M Q F L+TG MR ++
Sbjct: 228 YTPAETRFLREAARHGHRCVNGETMLAAQGAEAFFLWTGVRPDLLCMRRVL 278
>gi|374324961|ref|YP_005078090.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
gi|357203970|gb|AET61867.1| shikimate 5-dehydrogenase [Paenibacillus terrae HPL-003]
Length = 289
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 22/285 (7%)
Query: 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGF 297
+ G++ P+ HSK P++H + G +VP+ V D L+ + F G +V
Sbjct: 15 LLGVLGDPIKHSKSPLMHKIALKAAGIEGDFVPLHVKPDQLEDAMKGIRALHFRGVNVTI 74
Query: 298 PYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKN 357
P+K VMK+ DE+ A+ I AVNTI+ +G+L GYNTD + ++++ +
Sbjct: 75 PHKVEVMKYLDEIDEGARLIGAVNTIVN--DNGRLKGYNTDGIGYVRSLKEETSVK---- 128
Query: 358 GTASFGSPLAGRMFVLAGAGGAGRALAFGA-KSRGARVVIFDIDFERAKSLASDVMGAAR 416
L G + GAGGA R + + + V+I + ++A+ LA + A
Sbjct: 129 --------LKGTRIAVLGAGGAARGVIHALLEEQPESVIILNRTRDKAEQLALEWTTEAI 180
Query: 417 PFEDILNFQPEKGA----ILANATPLGMHPNTDRVPVSEETLRDYQLVFDAVYTPRKTRL 472
P N + E +L N T +GM P +D +P+ + + +V D +Y P +TR
Sbjct: 181 PVTGYSNDEAESVLASVDVLINTTSVGMSPLSDELPLETSLIPEGIIVSDLIYNPLETRF 240
Query: 473 LKDA-EAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMREIVL 516
L+++ E G + G+ MF+ Q F F G + MR VL
Sbjct: 241 LRESREQRGCTVHGGLGMFVYQGAVAFEYFMGVAPAVDEMRAAVL 285
>gi|402701993|ref|ZP_10849972.1| shikimate/quinate 5-dehydrogenase [Pseudomonas fragi A22]
Length = 271
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 124/262 (47%), Gaps = 22/262 (8%)
Query: 256 LHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315
+HN + + + +V V+D + + G +V PYK AVM D + A+
Sbjct: 23 IHNAAYAALGLDYTFVCFGVEDPVAAVAAIRALGVRGMNVSMPYKTAVMPHLDAIDESAR 82
Query: 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG 375
I AVNTI DG L GYNTD +I A+++ R + + G
Sbjct: 83 VIGAVNTI--NNVDGVLTGYNTDYLGAIRALQEVTGLRDKR--------------IAVIG 126
Query: 376 AGGAGRALAFGAKSRGARVVIFDIDFERAKSLASDVMGAARPFEDILNFQPEKGAILANA 435
AGGA RA+ FG ARV +F+ ER +LA D+ AR + F I+ NA
Sbjct: 127 AGGAARAVVFGCLQAAARVTLFNRTAERGTALAEDL--GARWGGSVEAFTASNFDIVINA 184
Query: 436 TPLGM-HPNTDRVPVSEETLRDYQLVFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQA 494
T +G P+++ + + L + +V D + P T LL+ A+A G V+G M + QA
Sbjct: 185 TSVGFKQPDSNPL---DGRLASHLIVMDVAFMPVHTALLQQAKALGCTTVAGTRMLVHQA 241
Query: 495 IGQFNLFTGKEAPKEFMREIVL 516
Q L+T KEAP + M + +L
Sbjct: 242 CRQIELYTEKEAPLDIMEQAML 263
>gi|291519149|emb|CBK74370.1| shikimate 5-dehydrogenase [Butyrivibrio fibrisolvens 16/4]
Length = 284
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSV 295
T+++ L+ PV HS P +HN F + + Y+ V DDL K + + GF+
Sbjct: 7 TRLYCLLGNPVSHSISPAMHNLAFDTLGLDNSYMAFNVEPDDLSKVVEGLKAINCGGFNC 66
Query: 296 GFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGY 355
P+K +++ DE+ +A +VNT++ R DGKL GY TD G+
Sbjct: 67 TMPFKTSIIPLLDEIDEVASLAHSVNTVVNR--DGKLFGYTTD-------------GIGF 111
Query: 356 KNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFD---------IDFER-- 403
A G + GAGG ++ A + G +++ IF +D+
Sbjct: 112 LQSMAECNIKYKGATISMLGAGGVATSIMTQAATEGVSKISIFKRKNATFDNVVDYADRI 171
Query: 404 AKSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVFDA 463
+K+ DV +DI+ F ++ IL N T +GM + D V +E L V D
Sbjct: 172 SKATECDVFVYDIADKDIMEFSLQESDILINGTNVGMGDD-DTSLVPKEFLHQNLTVCDT 230
Query: 464 VYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKEFMR 512
+Y P TRLLKDA + G ++G M L Q F L+T ++ P + ++
Sbjct: 231 IYHPEMTRLLKDAASLGCKTMNGKYMLLYQGAAAFKLWTNQDMPVDIVK 279
>gi|312865146|ref|ZP_07725374.1| shikimate dehydrogenase [Streptococcus downei F0415]
gi|311099257|gb|EFQ57473.1| shikimate dehydrogenase [Streptococcus downei F0415]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDF 290
I+ T++ ++++P+ HS P +HN F NG+YV + +DL++ D
Sbjct: 2 QIDGHTRMAAVVARPIRHSISPFIHNYAFDASGINGVYVAWDIPEEDLEESVQNVRRYDM 61
Query: 291 AGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAI 350
G ++ PYK+ V+ F DE+ A+ I AVNT++ R G+LIGYNTD A+E
Sbjct: 62 FGINISMPYKQVVIPFLDELDQAAELIGAVNTVVNR--QGRLIGYNTDGYGFFKALE--- 116
Query: 351 KERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFD----IDFERAK 405
K+ G+ +AG+ + G GGA +L A GA+ + IF+ ++ AK
Sbjct: 117 KDDGF---------TIAGKTMTILGGGGAATSLIVQAALDGAKKINIFNQTQFLEETEAK 167
Query: 406 SL----ASDVMGAARPFE--DILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQL 459
+ A+ V P E D++ + + +L NAT +GM + V + L
Sbjct: 168 AQKYEEATGVTLEVFPVENQDLIQEKILESQLLVNATSVGMDGKS-MVLADDTELPAGLR 226
Query: 460 VFDAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEAPKE 509
V D +Y P +T L A + G +G+ M L QA F L+TG + P +
Sbjct: 227 VADTIYQPFETSFLAYARSKGLKASNGLGMLLYQAAKSFQLWTGSQMPTD 276
>gi|56751646|ref|YP_172347.1| shikimate 5-dehydrogenase [Synechococcus elongatus PCC 6301]
gi|81301276|ref|YP_401484.1| shikimate 5-dehydrogenase [Synechococcus elongatus PCC 7942]
gi|56686605|dbj|BAD79827.1| shikimate 5-dehydrogenase [Synechococcus elongatus PCC 6301]
gi|81170157|gb|ABB58497.1| shikimate dehydrogenase [Synechococcus elongatus PCC 7942]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFA-- 291
+ T++ G+I P+ HS P++ N + + YVP V +
Sbjct: 4 LTGRTRLLGIIGDPIEHSLSPLIQNAAIAELGLDYCYVPFPVKGADLATALAGLAAIGVQ 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
GF+V P+K+AVM +V LAQ++ +VNT+ + ++ +G NTD
Sbjct: 64 GFNVTIPHKQAVMPLLSQVSELAQSVGSVNTVWQ--TEQGWVGTNTDV------------ 109
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR---VVIFDID----FERA 404
G+ + S +G VL G GGA RA+ G G V+ D F+++
Sbjct: 110 -LGFLAPLQTLRSDWSGCRVVLLGCGGAARAVVAGCLQLGCSAIATVVRDAQKGDAFQQS 168
Query: 405 KSLASDVMGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPV---SEETLRDYQLVF 461
+D + + DI + ++ N TPLGM P+ +R P+ + + LR + +
Sbjct: 169 WGDRADSL-TIHDWSDIPDVL-STADLVVNTTPLGMDPHIERSPLDNSAAQQLRPETIAY 226
Query: 462 DAVYTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTGKEA-PKEFMREIVLAKF 519
D +YTP TR L+ A A G + G+EM ++Q ++TG EA P + MR ++ A
Sbjct: 227 DLIYTPSPTRFLQQAIAQGCHAIDGLEMLVQQGAAGLKIWTGAEAVPVDTMRSVLNAHL 285
>gi|164688575|ref|ZP_02212603.1| hypothetical protein CLOBAR_02220 [Clostridium bartlettii DSM
16795]
gi|164602988|gb|EDQ96453.1| shikimate dehydrogenase [Clostridium bartlettii DSM 16795]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 131/279 (46%), Gaps = 25/279 (8%)
Query: 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFA 291
I++ TKV+ +I PV S P +HN F + + +YV V D +K+
Sbjct: 4 ISSKTKVYSVIGHPVSQSFSPKIHNYLFEKYDIDAVYVSYDVNPDRVKEGIEGIRHLGIM 63
Query: 292 GFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIK 351
G +V P+K VMK+ DE+ A+ AVNTI + DGKL GYNTD +I D
Sbjct: 64 GTNVTIPHKIEVMKYLDEIDKKAKLFGAVNTI--KNVDGKLYGYNTDGTGLTKSIRD--- 118
Query: 352 ERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFG-AKSRGARVVIFDIDFERAKSLASD 410
S G + G+ ++ GAGGA R++A A A + I + E+A+ +A
Sbjct: 119 ---------SSGEDIKGKKVLIIGAGGACRSIAIQLAIEEAASIEIVNRSIEKAQIIADT 169
Query: 411 V-----MGAARPFEDILNFQPEKGAILANATPLGMHPNTDRVPVSEETLRDYQLVF-DAV 464
+ A + I + IL N TP+GM TD P+ + ++ DAV
Sbjct: 170 INSHFETKAIASSKTITQDDIDNVDILINTTPIGM--GTDESPIDTSLVPPKNMIVADAV 227
Query: 465 YTPRKTRLLKDAEAAGAIIVSGVEMFLRQAIGQFNLFTG 503
Y P +T L+K I G++M + Q I F+++TG
Sbjct: 228 YKPHETALIKWGLKYNLKIAYGIQMLINQGIHSFSIWTG 266
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,057,459,267
Number of Sequences: 23463169
Number of extensions: 352020057
Number of successful extensions: 979696
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 3942
Number of HSP's that attempted gapping in prelim test: 960103
Number of HSP's gapped (non-prelim): 8092
length of query: 519
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 372
effective length of database: 8,910,109,524
effective search space: 3314560742928
effective search space used: 3314560742928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)