Query 010051
Match_columns 519
No_of_seqs 697 out of 3963
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 18:48:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010051.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010051hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 1.9E-47 6.6E-52 379.9 47.5 412 3-438 49-609 (611)
2 1nr0_A Actin interacting prote 100.0 9.7E-46 3.3E-50 367.7 39.2 352 7-405 141-608 (611)
3 2ynn_A Coatomer subunit beta'; 100.0 4.8E-45 1.6E-49 330.5 38.5 299 1-408 1-302 (304)
4 1vyh_C Platelet-activating fac 100.0 4.9E-45 1.7E-49 344.6 37.3 279 7-359 102-409 (410)
5 3ow8_A WD repeat-containing pr 100.0 1.1E-44 3.6E-49 330.2 37.7 282 6-359 25-319 (321)
6 1got_B GT-beta; complex (GTP-b 100.0 1.7E-43 5.8E-48 325.8 40.2 284 4-358 46-340 (340)
7 2ymu_A WD-40 repeat protein; u 100.0 6.2E-43 2.1E-47 347.1 46.4 396 2-436 46-576 (577)
8 4g56_B MGC81050 protein; prote 100.0 4.1E-44 1.4E-48 331.5 35.3 290 9-362 38-344 (357)
9 2pbi_B Guanine nucleotide-bind 100.0 4.2E-43 1.4E-47 324.5 39.9 287 4-358 55-354 (354)
10 4gqb_B Methylosome protein 50; 100.0 1.3E-43 4.4E-48 325.2 35.4 295 10-364 27-334 (344)
11 2ymu_A WD-40 repeat protein; u 100.0 1.7E-42 5.9E-47 343.9 41.9 317 2-405 251-577 (577)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-42 7.5E-47 318.9 38.2 294 5-364 7-338 (345)
13 3frx_A Guanine nucleotide-bind 100.0 1E-41 3.5E-46 310.8 38.3 295 7-406 11-315 (319)
14 2xzm_R RACK1; ribosome, transl 100.0 2.9E-41 9.7E-46 311.5 39.7 300 5-405 13-337 (343)
15 3iz6_a 40S ribosomal protein R 100.0 2.2E-42 7.6E-47 323.3 31.6 291 5-362 58-376 (380)
16 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-40 4.1E-45 359.4 45.4 419 6-459 608-1143(1249)
17 4ery_A WD repeat-containing pr 100.0 1.9E-40 6.3E-45 302.3 39.1 281 7-360 17-311 (312)
18 2hes_X YDR267CP; beta-propelle 100.0 9.3E-41 3.2E-45 306.0 37.0 300 4-406 5-326 (330)
19 1vyh_C Platelet-activating fac 100.0 4.2E-41 1.4E-45 317.7 35.6 294 57-405 101-408 (410)
20 2pm9_A Protein WEB1, protein t 100.0 5E-42 1.7E-46 326.3 29.4 338 11-406 10-412 (416)
21 1erj_A Transcriptional repress 100.0 1.2E-40 4.1E-45 313.0 37.3 295 9-362 60-390 (393)
22 3ow8_A WD repeat-containing pr 100.0 7.6E-41 2.6E-45 304.8 33.7 277 60-405 28-318 (321)
23 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-40 8.5E-45 356.9 41.0 374 3-409 647-1159(1249)
24 3vl1_A 26S proteasome regulato 100.0 9.2E-41 3.1E-45 318.0 32.5 348 15-407 58-418 (420)
25 1pgu_A Actin interacting prote 100.0 1.7E-39 5.9E-44 325.0 41.5 373 4-406 54-612 (615)
26 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-39 3.7E-44 335.4 37.6 408 7-438 11-659 (902)
27 3mkq_A Coatomer beta'-subunit; 100.0 4E-39 1.4E-43 332.9 41.1 382 1-455 1-438 (814)
28 1r5m_A SIR4-interacting protei 100.0 2.4E-39 8.3E-44 308.7 36.3 326 10-406 42-423 (425)
29 4h5i_A Guanine nucleotide-exch 100.0 3E-39 1E-43 299.6 35.6 298 12-362 13-344 (365)
30 1gxr_A ESG1, transducin-like e 100.0 1.6E-38 5.5E-43 293.2 39.5 283 7-360 45-336 (337)
31 2oaj_A Protein SNI1; WD40 repe 100.0 2.2E-39 7.4E-44 333.2 36.9 361 5-406 50-659 (902)
32 4g56_B MGC81050 protein; prote 100.0 2.6E-39 8.9E-44 299.3 30.7 310 17-407 9-342 (357)
33 1got_B GT-beta; complex (GTP-b 100.0 2E-38 6.8E-43 291.9 35.6 277 57-404 48-339 (340)
34 4aow_A Guanine nucleotide-bind 100.0 1E-37 3.4E-42 288.2 39.1 297 8-407 33-336 (340)
35 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-38 8.8E-43 291.7 34.6 294 58-408 9-335 (345)
36 2pm7_B Protein transport prote 100.0 3.7E-38 1.2E-42 284.3 34.5 256 7-361 3-285 (297)
37 3dm0_A Maltose-binding peripla 100.0 2.2E-38 7.4E-43 320.3 35.8 299 7-406 376-691 (694)
38 1gxr_A ESG1, transducin-like e 100.0 2.9E-38 9.8E-43 291.4 32.9 316 12-405 8-334 (337)
39 3zwl_B Eukaryotic translation 100.0 1.3E-37 4.5E-42 290.9 37.6 295 7-364 26-349 (369)
40 4gqb_B Methylosome protein 50; 100.0 8E-38 2.7E-42 286.7 35.0 281 62-408 28-331 (344)
41 3iz6_a 40S ribosomal protein R 100.0 9E-39 3.1E-43 298.9 28.5 291 57-408 59-375 (380)
42 3ei3_B DNA damage-binding prot 100.0 8.3E-38 2.8E-42 293.6 35.1 297 5-361 65-382 (383)
43 4e54_B DNA damage-binding prot 100.0 2E-39 6.9E-44 309.2 24.3 300 8-364 114-433 (435)
44 1k8k_C P40, ARP2/3 complex 41 100.0 1E-37 3.5E-42 292.0 35.4 298 8-406 3-359 (372)
45 1pgu_A Actin interacting prote 100.0 2.7E-37 9.2E-42 309.2 40.1 398 10-438 15-612 (615)
46 3k26_A Polycomb protein EED; W 100.0 3.6E-38 1.2E-42 294.3 30.5 311 7-360 12-365 (366)
47 3i2n_A WD repeat-containing pr 100.0 6.5E-38 2.2E-42 291.6 31.3 284 8-363 13-355 (357)
48 2pbi_B Guanine nucleotide-bind 100.0 2.9E-37 1E-41 285.4 35.3 278 57-404 57-353 (354)
49 1sq9_A Antiviral protein SKI8; 100.0 1.3E-37 4.4E-42 294.0 33.1 310 6-406 9-393 (397)
50 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-36 6.7E-41 289.9 40.9 312 5-401 110-430 (445)
51 4ery_A WD repeat-containing pr 100.0 1.3E-36 4.4E-41 276.9 36.5 281 56-406 15-310 (312)
52 3bg1_A Protein SEC13 homolog; 100.0 1.2E-37 4E-42 283.6 29.3 258 7-361 7-293 (316)
53 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-36 4.1E-41 277.5 36.2 285 4-368 9-303 (313)
54 2ynn_A Coatomer subunit beta'; 100.0 5E-37 1.7E-41 277.9 32.9 253 94-408 4-259 (304)
55 1erj_A Transcriptional repress 100.0 1.1E-36 3.9E-41 286.0 34.9 273 62-406 62-387 (393)
56 3dwl_C Actin-related protein 2 100.0 3.5E-38 1.2E-42 295.6 23.9 252 7-361 5-281 (377)
57 3v7d_B Cell division control p 100.0 2.4E-36 8.3E-41 291.2 36.5 313 5-405 113-459 (464)
58 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-38 2.3E-42 301.2 24.9 330 5-406 125-515 (524)
59 2hes_X YDR267CP; beta-propelle 100.0 1.8E-36 6.1E-41 277.5 32.9 252 12-361 57-328 (330)
60 2j04_A TAU60, YPL007P, hypothe 100.0 6.4E-38 2.2E-42 292.8 23.3 312 11-398 13-350 (588)
61 4a11_B DNA excision repair pro 100.0 1.5E-35 5.2E-40 280.9 39.5 313 4-365 34-369 (408)
62 3dw8_B Serine/threonine-protei 100.0 1.5E-36 5.1E-41 291.4 32.2 304 12-407 27-445 (447)
63 3gre_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 293.0 28.9 308 2-358 51-437 (437)
64 3f3f_A Nucleoporin SEH1; struc 100.0 8.3E-36 2.8E-40 276.4 34.9 275 7-366 5-342 (351)
65 3frx_A Guanine nucleotide-bind 100.0 6.6E-36 2.2E-40 272.4 33.2 285 94-439 8-316 (319)
66 1r5m_A SIR4-interacting protei 100.0 3.2E-36 1.1E-40 287.2 31.0 272 12-360 107-424 (425)
67 3jrp_A Fusion protein of prote 100.0 6.4E-36 2.2E-40 280.5 32.0 259 3-362 1-288 (379)
68 2pm7_B Protein transport prote 100.0 1.1E-35 3.9E-40 268.0 32.3 267 97-407 3-284 (297)
69 4aez_A CDC20, WD repeat-contai 100.0 2.7E-35 9.1E-40 277.8 35.8 288 11-409 89-381 (401)
70 1yfq_A Cell cycle arrest prote 100.0 8.6E-36 2.9E-40 275.5 31.7 290 6-401 4-315 (342)
71 2xzm_R RACK1; ribosome, transl 100.0 9.7E-35 3.3E-39 267.8 36.7 260 94-408 12-285 (343)
72 3mkq_A Coatomer beta'-subunit; 100.0 5.1E-35 1.7E-39 302.3 38.8 373 3-459 45-484 (814)
73 2pm9_A Protein WEB1, protein t 100.0 1.7E-36 5.9E-41 288.2 23.2 293 9-362 63-415 (416)
74 4gga_A P55CDC, cell division c 100.0 2.5E-34 8.7E-39 272.8 37.6 282 16-408 108-395 (420)
75 3vl1_A 26S proteasome regulato 100.0 1.8E-35 6.1E-40 281.4 29.6 275 14-361 98-419 (420)
76 4ggc_A P55CDC, cell division c 100.0 3.5E-34 1.2E-38 261.8 35.3 279 16-362 28-316 (318)
77 3zwl_B Eukaryotic translation 100.0 4E-34 1.4E-38 267.2 36.4 292 58-408 26-346 (369)
78 2j04_B YDR362CP, TAU91; beta p 100.0 8.8E-36 3E-40 286.6 24.8 286 9-362 203-518 (524)
79 3mmy_A MRNA export factor; mRN 100.0 1.8E-34 6.1E-39 269.5 32.7 287 4-400 30-337 (368)
80 3k26_A Polycomb protein EED; W 100.0 1E-34 3.6E-39 270.9 28.1 287 60-406 14-364 (366)
81 3bg1_A Protein SEC13 homolog; 100.0 6E-35 2.1E-39 265.6 24.9 266 98-407 8-292 (316)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.6E-33 1.2E-37 267.3 38.4 277 3-362 149-443 (445)
83 4e54_B DNA damage-binding prot 100.0 5.3E-34 1.8E-38 271.8 30.8 283 59-409 114-431 (435)
84 3ei3_B DNA damage-binding prot 100.0 1.1E-33 3.8E-38 265.4 31.6 281 56-407 65-381 (383)
85 4aow_A Guanine nucleotide-bind 100.0 6.7E-33 2.3E-37 255.8 34.7 284 94-440 29-337 (340)
86 3i2n_A WD repeat-containing pr 100.0 5.8E-34 2E-38 264.8 27.2 284 60-407 14-352 (357)
87 3jro_A Fusion protein of prote 100.0 3E-34 1E-38 291.3 26.8 254 6-361 2-285 (753)
88 3gre_A Serine/threonine-protei 100.0 1.8E-34 6E-39 276.0 23.4 313 20-402 34-433 (437)
89 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-32 4E-37 262.8 35.3 280 8-409 128-415 (435)
90 3dwl_C Actin-related protein 2 100.0 1.8E-34 6.2E-39 270.3 22.0 249 102-410 10-283 (377)
91 4aez_A CDC20, WD repeat-contai 100.0 7.5E-33 2.5E-37 261.1 33.0 249 10-365 131-384 (401)
92 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-33 1.7E-37 262.6 31.5 288 15-364 36-345 (402)
93 1sq9_A Antiviral protein SKI8; 100.0 3.3E-33 1.1E-37 263.7 30.1 261 5-362 54-396 (397)
94 2xyi_A Probable histone-bindin 100.0 3E-33 1E-37 266.1 29.9 264 7-362 122-411 (430)
95 3dm0_A Maltose-binding peripla 100.0 5.4E-33 1.9E-37 280.8 33.2 282 94-438 373-691 (694)
96 3odt_A Protein DOA1; ubiquitin 100.0 1.8E-32 6.2E-37 249.8 32.5 274 56-409 10-297 (313)
97 4gga_A P55CDC, cell division c 100.0 3.2E-32 1.1E-36 258.4 34.8 255 4-362 136-396 (420)
98 3jrp_A Fusion protein of prote 100.0 9.2E-33 3.1E-37 259.0 29.7 266 95-407 3-286 (379)
99 3vu4_A KMHSV2; beta-propeller 100.0 7.1E-32 2.4E-36 249.4 33.8 280 6-402 12-329 (355)
100 1k8k_C P40, ARP2/3 complex 41 100.0 3.9E-32 1.3E-36 254.0 32.1 246 101-408 6-274 (372)
101 3v7d_B Cell division control p 100.0 1.5E-31 5.2E-36 257.7 36.2 299 59-411 116-424 (464)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-31 6.2E-36 255.6 35.1 316 14-398 5-374 (450)
103 4h5i_A Guanine nucleotide-exch 100.0 1E-32 3.4E-37 255.8 25.4 277 64-407 14-342 (365)
104 4gq1_A NUP37; propeller, trans 100.0 7E-32 2.4E-36 253.1 31.3 271 70-360 104-388 (393)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-31 3.7E-36 253.5 30.3 270 73-405 53-339 (402)
106 4ggc_A P55CDC, cell division c 100.0 1.5E-30 5E-35 237.7 36.8 271 68-407 29-314 (318)
107 2xyi_A Probable histone-bindin 100.0 1.3E-31 4.5E-36 254.7 29.0 257 98-408 123-410 (430)
108 3f3f_A Nucleoporin SEH1; struc 100.0 6.2E-31 2.1E-35 243.6 32.0 262 97-408 5-337 (351)
109 3jro_A Fusion protein of prote 100.0 3.1E-31 1E-35 269.3 28.4 264 97-407 3-284 (753)
110 4a11_B DNA excision repair pro 100.0 5.4E-31 1.8E-35 249.6 27.7 303 34-409 22-366 (408)
111 3bws_A Protein LP49; two-domai 100.0 6.7E-30 2.3E-34 244.0 34.5 292 12-361 121-432 (433)
112 3lrv_A PRE-mRNA-splicing facto 100.0 3.9E-30 1.3E-34 237.1 31.5 275 20-362 43-334 (343)
113 1yfq_A Cell cycle arrest prote 100.0 1.9E-30 6.6E-35 239.5 28.8 242 6-358 49-321 (342)
114 3dw8_B Serine/threonine-protei 100.0 2.5E-30 8.6E-35 248.1 30.1 278 102-409 27-374 (447)
115 3bws_A Protein LP49; two-domai 100.0 3.9E-29 1.3E-33 238.7 35.4 324 12-406 59-430 (433)
116 2w18_A PALB2, fancn, partner a 100.0 1E-29 3.5E-34 222.9 28.4 275 16-359 42-355 (356)
117 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-29 3.8E-34 242.1 27.5 243 3-364 163-417 (435)
118 1l0q_A Surface layer protein; 100.0 5.8E-28 2E-32 227.3 34.6 264 26-369 3-283 (391)
119 3mmy_A MRNA export factor; mRN 100.0 6.1E-29 2.1E-33 231.9 27.3 248 7-362 80-347 (368)
120 3lrv_A PRE-mRNA-splicing facto 100.0 6.5E-29 2.2E-33 228.9 26.2 257 68-402 49-326 (343)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-28 7.6E-33 234.1 30.2 246 11-362 100-392 (450)
122 4gq1_A NUP37; propeller, trans 100.0 6.3E-30 2.1E-34 239.8 18.5 310 13-405 15-386 (393)
123 1l0q_A Surface layer protein; 100.0 2.1E-27 7.1E-32 223.5 35.1 304 6-397 25-366 (391)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.5E-28 8.4E-33 230.2 27.9 302 14-390 63-409 (415)
125 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-27 4.1E-32 221.1 28.1 243 94-409 10-272 (355)
126 2j04_A TAU60, YPL007P, hypothe 100.0 2.2E-28 7.4E-33 228.8 23.1 253 102-439 14-296 (588)
127 1nir_A Nitrite reductase; hemo 100.0 1.3E-26 4.5E-31 224.8 29.4 316 20-409 144-515 (543)
128 2w18_A PALB2, fancn, partner a 100.0 2.7E-27 9.1E-32 207.7 20.2 223 12-316 110-355 (356)
129 2ecf_A Dipeptidyl peptidase IV 100.0 1.5E-26 5E-31 236.2 29.1 320 13-397 36-443 (741)
130 1k32_A Tricorn protease; prote 100.0 6.1E-26 2.1E-30 239.2 33.4 348 2-400 41-493 (1045)
131 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-26 1.1E-30 233.3 24.3 344 14-397 17-428 (723)
132 2ojh_A Uncharacterized protein 99.9 6.4E-25 2.2E-29 198.0 27.7 253 75-399 20-292 (297)
133 1nir_A Nitrite reductase; hemo 99.9 1.3E-24 4.3E-29 211.0 31.5 282 16-369 181-522 (543)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.4E-24 4.6E-29 204.6 28.3 257 9-343 113-410 (415)
135 2z3z_A Dipeptidyl aminopeptida 99.9 5.5E-25 1.9E-29 223.3 24.0 323 15-408 27-435 (706)
136 3u4y_A Uncharacterized protein 99.9 1.7E-23 5.8E-28 191.9 30.9 285 19-410 3-306 (331)
137 1k32_A Tricorn protease; prote 99.9 5.7E-24 1.9E-28 224.2 28.6 352 3-410 235-639 (1045)
138 3vgz_A Uncharacterized protein 99.9 5.3E-23 1.8E-27 190.5 31.0 270 11-352 38-335 (353)
139 2z3z_A Dipeptidyl aminopeptida 99.9 2.2E-23 7.4E-28 211.6 29.9 278 14-363 82-437 (706)
140 2ojh_A Uncharacterized protein 99.9 1.4E-23 4.8E-28 189.2 25.4 243 3-352 31-293 (297)
141 1pby_B Quinohemoprotein amine 99.9 1.2E-23 4.1E-28 193.5 24.8 277 26-371 2-320 (337)
142 1ri6_A Putative isomerase YBHE 99.9 4.6E-23 1.6E-27 190.1 28.7 252 9-360 33-307 (343)
143 2ecf_A Dipeptidyl peptidase IV 99.9 4E-23 1.4E-27 210.9 28.6 275 15-362 110-460 (741)
144 1ri6_A Putative isomerase YBHE 99.9 1.1E-21 3.8E-26 180.8 31.9 244 102-405 36-305 (343)
145 3hfq_A Uncharacterized protein 99.9 2.9E-22 1E-26 184.9 25.4 251 10-360 36-316 (347)
146 3u4y_A Uncharacterized protein 99.9 9.7E-22 3.3E-26 180.2 27.9 259 5-364 32-307 (331)
147 1xfd_A DIP, dipeptidyl aminope 99.9 2E-22 6.7E-27 205.2 25.1 286 4-350 48-429 (723)
148 1jmx_B Amine dehydrogenase; ox 99.9 8.8E-22 3E-26 182.0 24.1 296 18-371 4-335 (349)
149 3o4h_A Acylamino-acid-releasin 99.9 6.1E-22 2.1E-26 196.0 24.6 266 12-360 20-314 (582)
150 1z68_A Fibroblast activation p 99.9 7.3E-22 2.5E-26 200.7 24.3 313 17-396 19-427 (719)
151 3vgz_A Uncharacterized protein 99.9 1.1E-20 3.7E-25 175.0 28.2 249 77-399 69-334 (353)
152 3pe7_A Oligogalacturonate lyas 99.9 3.8E-21 1.3E-25 180.5 25.3 296 2-398 19-370 (388)
153 1pby_B Quinohemoprotein amine 99.9 1.6E-20 5.5E-25 172.5 28.1 273 70-408 4-310 (337)
154 4a5s_A Dipeptidyl peptidase 4 99.9 2.6E-20 9E-25 189.1 30.4 348 13-399 16-436 (740)
155 3scy_A Hypothetical bacterial 99.9 2.3E-19 7.8E-24 166.4 33.2 257 12-361 48-337 (361)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 6.2E-21 2.1E-25 180.1 22.4 217 12-363 35-280 (434)
157 3hfq_A Uncharacterized protein 99.9 8E-20 2.7E-24 168.6 29.0 277 76-405 15-314 (347)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 1.5E-19 5.2E-24 170.6 27.3 185 10-260 89-279 (434)
159 3scy_A Hypothetical bacterial 99.9 1.2E-18 4.2E-23 161.5 32.7 275 75-402 25-330 (361)
160 1z68_A Fibroblast activation p 99.9 1.3E-20 4.3E-25 191.6 21.0 294 5-364 48-446 (719)
161 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.9E-19 6.6E-24 166.9 25.6 250 12-362 38-342 (365)
162 3c5m_A Oligogalacturonate lyas 99.8 4.1E-19 1.4E-23 167.1 21.8 287 3-398 20-370 (396)
163 3o4h_A Acylamino-acid-releasin 99.8 1.4E-19 4.8E-24 179.1 18.9 232 103-406 21-274 (582)
164 4a5s_A Dipeptidyl peptidase 4 99.8 6.3E-18 2.1E-22 171.7 26.5 248 105-397 18-338 (740)
165 1jmx_B Amine dehydrogenase; ox 99.8 1.3E-17 4.5E-22 153.8 26.3 265 70-408 14-325 (349)
166 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.7E-17 9.4E-22 152.4 27.8 246 104-406 40-339 (365)
167 1q7f_A NHL, brain tumor CG1071 99.8 1.4E-16 4.6E-21 142.5 30.9 245 12-361 28-280 (286)
168 3fvz_A Peptidyl-glycine alpha- 99.8 1E-16 3.5E-21 146.1 29.5 282 13-362 23-323 (329)
169 3azo_A Aminopeptidase; POP fam 99.8 6.5E-17 2.2E-21 162.7 29.3 282 9-363 19-371 (662)
170 2oiz_A Aromatic amine dehydrog 99.8 7.3E-17 2.5E-21 148.6 25.3 290 23-391 13-360 (361)
171 3pe7_A Oligogalacturonate lyas 99.8 5.7E-17 2E-21 151.9 24.7 257 94-396 21-307 (388)
172 2dg1_A DRP35, lactonase; beta 99.8 1.8E-16 6.2E-21 145.1 26.0 249 100-399 41-300 (333)
173 2xdw_A Prolyl endopeptidase; a 99.7 5.1E-16 1.7E-20 157.0 27.2 249 12-363 123-416 (710)
174 3e5z_A Putative gluconolactona 99.7 4.4E-15 1.5E-19 133.3 30.2 247 3-364 17-289 (296)
175 3azo_A Aminopeptidase; POP fam 99.7 2.4E-16 8.1E-21 158.6 23.9 243 60-360 19-322 (662)
176 2dg1_A DRP35, lactonase; beta 99.7 1.3E-14 4.6E-19 132.6 33.0 191 102-352 85-301 (333)
177 2z2n_A Virginiamycin B lyase; 99.7 7.7E-14 2.6E-18 125.4 37.3 280 11-406 12-293 (299)
178 3e5z_A Putative gluconolactona 99.7 1.8E-15 6E-20 135.9 25.4 252 101-411 25-289 (296)
179 2gop_A Trilobed protease; beta 99.7 5.3E-15 1.8E-19 136.2 28.4 259 12-360 13-330 (347)
180 1q7f_A NHL, brain tumor CG1071 99.7 1.1E-14 3.7E-19 130.1 29.6 240 101-406 27-278 (286)
181 2oiz_A Aromatic amine dehydrog 99.7 6.3E-15 2.2E-19 135.7 25.8 274 18-343 54-360 (361)
182 2bkl_A Prolyl endopeptidase; m 99.7 8.4E-16 2.9E-20 154.9 21.5 249 11-364 118-400 (695)
183 3fvz_A Peptidyl-glycine alpha- 99.7 7.6E-15 2.6E-19 133.7 25.7 250 103-405 23-319 (329)
184 1qks_A Cytochrome CD1 nitrite 99.7 5.4E-14 1.8E-18 136.0 32.1 299 23-396 165-520 (567)
185 1rwi_B Serine/threonine-protei 99.7 3.8E-14 1.3E-18 125.4 27.3 241 15-363 25-266 (270)
186 3c5m_A Oligogalacturonate lyas 99.7 1.4E-15 4.9E-20 142.8 18.6 282 4-360 70-381 (396)
187 2xdw_A Prolyl endopeptidase; a 99.7 2.2E-14 7.6E-19 145.0 27.5 238 102-395 123-396 (710)
188 2gop_A Trilobed protease; beta 99.7 8.8E-15 3E-19 134.7 21.4 244 76-398 42-319 (347)
189 3sjl_D Methylamine dehydrogena 99.7 3.9E-14 1.3E-18 128.2 24.6 281 18-374 37-376 (386)
190 2bkl_A Prolyl endopeptidase; m 99.7 2.8E-14 9.7E-19 143.8 25.4 233 102-395 119-379 (695)
191 3dsm_A Uncharacterized protein 99.6 7.3E-14 2.5E-18 126.9 25.7 271 33-369 15-309 (328)
192 2qc5_A Streptogramin B lactona 99.6 7.7E-12 2.6E-16 112.3 36.9 276 12-403 18-295 (300)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4.5E-13 1.5E-17 121.4 28.7 246 11-362 15-300 (314)
194 1qks_A Cytochrome CD1 nitrite 99.6 1.4E-12 4.7E-17 126.2 33.0 271 70-397 170-458 (567)
195 1yr2_A Prolyl oligopeptidase; 99.6 2.8E-14 9.5E-19 144.9 20.9 249 12-363 161-443 (741)
196 2mad_H Methylamine dehydrogena 99.6 3.3E-12 1.1E-16 117.5 31.5 273 19-367 26-356 (373)
197 3no2_A Uncharacterized protein 99.6 1.3E-12 4.3E-17 115.1 27.0 230 24-360 4-250 (276)
198 3no2_A Uncharacterized protein 99.6 3.2E-13 1.1E-17 118.8 23.1 225 114-397 4-231 (276)
199 1yr2_A Prolyl oligopeptidase; 99.6 2.2E-13 7.6E-18 138.3 23.7 235 102-394 161-422 (741)
200 3dsm_A Uncharacterized protein 99.6 1.5E-12 5.3E-17 118.2 26.2 265 75-407 15-301 (328)
201 2z2n_A Virginiamycin B lyase; 99.6 2.9E-11 1E-15 108.4 32.9 198 102-362 97-296 (299)
202 1rwi_B Serine/threonine-protei 99.5 3.1E-12 1.1E-16 113.0 25.5 232 105-402 25-257 (270)
203 3hrp_A Uncharacterized protein 99.5 1.1E-11 3.7E-16 115.8 29.0 196 109-360 176-409 (409)
204 3g4e_A Regucalcin; six bladed 99.5 2E-11 6.9E-16 109.2 28.1 231 11-350 10-261 (297)
205 3c75_H MADH, methylamine dehyd 99.5 3.6E-12 1.2E-16 117.6 23.3 255 77-368 99-409 (426)
206 2qe8_A Uncharacterized protein 99.5 2.8E-12 9.5E-17 117.4 20.7 263 14-355 17-315 (343)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.9E-11 6.5E-16 110.6 26.0 251 102-406 16-297 (314)
208 3iuj_A Prolyl endopeptidase; h 99.5 3E-12 1E-16 128.8 21.4 248 11-363 126-407 (693)
209 2mad_H Methylamine dehydrogena 99.5 1.9E-10 6.3E-15 105.8 31.2 255 78-410 48-352 (373)
210 2ghs_A AGR_C_1268P; regucalcin 99.5 1.9E-10 6.5E-15 104.3 30.2 185 104-351 90-292 (326)
211 2qc5_A Streptogramin B lactona 99.4 3.6E-10 1.2E-14 101.3 31.1 194 103-359 103-298 (300)
212 1xip_A Nucleoporin NUP159; bet 99.4 2.5E-12 8.6E-17 116.9 16.2 119 15-178 39-157 (388)
213 3iuj_A Prolyl endopeptidase; h 99.4 6.1E-12 2.1E-16 126.5 20.6 236 102-397 127-389 (693)
214 3g4e_A Regucalcin; six bladed 99.4 8.4E-11 2.9E-15 105.2 25.5 241 102-398 11-261 (297)
215 3dr2_A Exported gluconolactona 99.4 8.7E-11 3E-15 105.5 25.7 241 3-352 34-298 (305)
216 3hrp_A Uncharacterized protein 99.4 1.9E-10 6.5E-15 107.4 27.2 241 104-402 131-403 (409)
217 1mda_H Methylamine dehydrogena 99.4 6.6E-11 2.2E-15 107.5 19.6 247 78-369 47-354 (368)
218 3sjl_D Methylamine dehydrogena 99.3 1.4E-10 4.6E-15 105.1 21.3 274 18-341 82-384 (386)
219 3dr2_A Exported gluconolactona 99.3 3.5E-10 1.2E-14 101.5 23.3 246 99-403 40-301 (305)
220 1xip_A Nucleoporin NUP159; bet 99.3 2.2E-11 7.6E-16 110.7 15.0 187 147-396 39-231 (388)
221 2ghs_A AGR_C_1268P; regucalcin 99.3 3.5E-10 1.2E-14 102.5 23.0 231 105-397 50-290 (326)
222 1yiq_A Quinohemoprotein alcoho 99.2 3.4E-09 1.2E-13 105.8 26.3 80 308-394 454-533 (689)
223 1fwx_A Nitrous oxide reductase 99.2 2.6E-10 8.9E-15 107.6 16.6 286 28-398 18-407 (595)
224 1kb0_A Quinohemoprotein alcoho 99.2 3.9E-09 1.3E-13 105.1 26.1 80 309-395 457-536 (677)
225 3c75_H MADH, methylamine dehyd 99.2 3.2E-09 1.1E-13 98.1 21.7 265 23-325 82-409 (426)
226 2ece_A 462AA long hypothetical 99.2 4.5E-08 1.5E-12 89.3 27.3 224 70-349 99-399 (462)
227 2qe8_A Uncharacterized protein 99.2 4.1E-09 1.4E-13 96.3 20.7 243 104-401 17-313 (343)
228 2ece_A 462AA long hypothetical 99.1 2.2E-07 7.6E-12 84.7 29.9 239 113-397 93-399 (462)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.3E-07 4.6E-12 87.5 28.2 281 24-369 52-345 (376)
230 1kb0_A Quinohemoprotein alcoho 99.1 1.6E-08 5.4E-13 100.7 22.6 303 24-347 127-536 (677)
231 1mda_H Methylamine dehydrogena 99.1 6.2E-09 2.1E-13 94.5 17.1 266 18-340 69-366 (368)
232 2iwa_A Glutamine cyclotransfer 99.1 3.8E-08 1.3E-12 84.3 20.7 213 9-259 14-237 (266)
233 3hxj_A Pyrrolo-quinoline quino 99.0 2.6E-08 8.8E-13 90.5 21.0 287 19-403 25-318 (330)
234 1yiq_A Quinohemoprotein alcoho 99.0 3.8E-08 1.3E-12 98.2 23.5 305 24-349 120-537 (689)
235 3q7m_A Lipoprotein YFGL, BAMB; 99.0 4.9E-07 1.7E-11 83.7 27.5 258 24-358 102-375 (376)
236 3hxj_A Pyrrolo-quinoline quino 99.0 3.1E-08 1.1E-12 90.0 18.1 264 15-362 61-325 (330)
237 2hz6_A Endoplasmic reticulum t 99.0 3.8E-10 1.3E-14 103.9 5.3 187 114-367 8-198 (369)
238 2iwa_A Glutamine cyclotransfer 98.9 7.5E-07 2.6E-11 76.3 24.3 206 94-362 10-238 (266)
239 1npe_A Nidogen, entactin; glyc 98.9 1.9E-06 6.5E-11 75.4 27.1 223 105-390 37-262 (267)
240 1fwx_A Nitrous oxide reductase 98.9 3.2E-08 1.1E-12 93.6 16.2 265 22-367 98-437 (595)
241 4a2l_A BT_4663, two-component 98.9 2.3E-05 7.8E-10 80.3 37.4 322 13-410 262-616 (795)
242 3nol_A Glutamine cyclotransfer 98.9 1.9E-07 6.3E-12 78.9 17.9 199 9-239 36-245 (262)
243 2hz6_A Endoplasmic reticulum t 98.9 1.2E-09 4.2E-14 100.5 5.0 224 24-363 8-238 (369)
244 2fp8_A Strictosidine synthase; 98.8 1.6E-06 5.5E-11 78.2 24.7 255 14-361 19-313 (322)
245 4a2l_A BT_4663, two-component 98.8 2.4E-05 8.4E-10 80.1 35.5 320 16-408 133-480 (795)
246 3nol_A Glutamine cyclotransfer 98.8 1.1E-06 3.7E-11 74.2 20.6 192 94-351 32-245 (262)
247 2p4o_A Hypothetical protein; p 98.8 9.5E-06 3.3E-10 72.5 27.3 238 14-352 32-279 (306)
248 1kv9_A Type II quinohemoprotei 98.8 2.6E-06 8.8E-11 84.8 25.3 78 307-391 436-513 (668)
249 3nok_A Glutaminyl cyclase; bet 98.8 9.6E-07 3.3E-11 74.5 18.7 200 8-239 47-255 (268)
250 1npe_A Nidogen, entactin; glyc 98.8 1.3E-05 4.4E-10 70.1 26.9 181 104-343 79-263 (267)
251 1k3i_A Galactose oxidase precu 98.7 1.1E-06 3.7E-11 87.7 21.6 245 105-398 244-530 (656)
252 2p4o_A Hypothetical protein; p 98.7 1.7E-05 5.7E-10 70.9 25.7 230 104-399 32-278 (306)
253 1kv9_A Type II quinohemoprotei 98.7 7.9E-06 2.7E-10 81.3 25.6 153 25-180 117-337 (668)
254 2ad6_A Methanol dehydrogenase 98.7 1.9E-05 6.4E-10 76.9 27.1 83 307-396 442-524 (571)
255 3v9f_A Two-component system se 98.6 0.00058 2E-08 69.7 39.0 326 14-409 211-569 (781)
256 3mbr_X Glutamine cyclotransfer 98.6 1E-05 3.6E-10 67.7 20.7 200 9-239 14-224 (243)
257 2xe4_A Oligopeptidase B; hydro 98.6 7.4E-06 2.5E-10 82.9 23.9 201 105-360 175-397 (751)
258 3nok_A Glutaminyl cyclase; bet 98.6 4.6E-06 1.6E-10 70.4 18.2 178 105-349 56-253 (268)
259 3v9f_A Two-component system se 98.6 0.00061 2.1E-08 69.6 36.7 332 14-407 163-523 (781)
260 2xe4_A Oligopeptidase B; hydro 98.6 9.9E-06 3.4E-10 82.0 23.0 113 15-177 175-305 (751)
261 3mbr_X Glutamine cyclotransfer 98.6 2.4E-05 8.1E-10 65.5 21.3 191 94-350 10-223 (243)
262 1w6s_A Methanol dehydrogenase 98.6 8.4E-05 2.9E-09 72.3 28.0 80 307-393 451-530 (599)
263 1flg_A Protein (quinoprotein e 98.5 0.00011 3.9E-09 71.5 28.1 80 308-394 465-544 (582)
264 2fp8_A Strictosidine synthase; 98.5 2.7E-05 9.3E-10 70.1 22.2 210 104-360 19-268 (322)
265 3tc9_A Hypothetical hydrolase; 98.5 7.8E-05 2.7E-09 69.8 25.5 115 103-258 178-300 (430)
266 4hw6_A Hypothetical protein, I 98.5 0.00015 5.1E-09 67.9 26.4 200 103-360 181-432 (433)
267 3qqz_A Putative uncharacterize 98.4 0.00051 1.8E-08 58.4 26.1 214 97-358 20-250 (255)
268 2ad6_A Methanol dehydrogenase 98.4 6.3E-05 2.1E-09 73.2 22.9 152 25-180 115-339 (571)
269 1w6s_A Methanol dehydrogenase 98.4 0.00022 7.6E-09 69.4 25.5 158 19-180 111-346 (599)
270 3v65_B Low-density lipoprotein 98.3 0.00057 1.9E-08 63.0 26.8 208 103-367 115-324 (386)
271 3v64_C Agrin; beta propeller, 98.3 0.0012 3.9E-08 60.0 28.4 240 15-326 35-283 (349)
272 3kya_A Putative phosphatase; s 98.3 0.00071 2.4E-08 63.5 27.1 71 104-175 186-277 (496)
273 3v65_B Low-density lipoprotein 98.3 0.00079 2.7E-08 62.0 27.2 238 18-327 81-327 (386)
274 3v64_C Agrin; beta propeller, 98.3 0.0019 6.5E-08 58.6 30.1 205 103-364 72-278 (349)
275 1flg_A Protein (quinoprotein e 98.3 0.00049 1.7E-08 67.1 26.5 73 108-181 250-360 (582)
276 3qqz_A Putative uncharacterize 98.3 0.0013 4.6E-08 55.8 25.9 117 11-175 24-150 (255)
277 1ijq_A LDL receptor, low-densi 98.3 0.0021 7.2E-08 57.4 29.0 230 27-326 3-246 (316)
278 1k3i_A Galactose oxidase precu 98.2 4E-05 1.4E-09 76.4 17.8 243 108-399 190-476 (656)
279 3p5b_L Low density lipoprotein 98.2 0.0034 1.2E-07 58.1 30.8 168 103-327 158-329 (400)
280 1ijq_A LDL receptor, low-densi 98.2 0.0037 1.3E-07 55.7 28.8 225 77-364 10-241 (316)
281 3tc9_A Hypothetical hydrolase; 98.1 0.00061 2.1E-08 63.7 22.4 156 104-317 137-300 (430)
282 2ism_A Putative oxidoreductase 98.1 0.0047 1.6E-07 56.0 29.1 29 12-41 29-57 (352)
283 3sov_A LRP-6, low-density lipo 98.1 0.0034 1.2E-07 55.9 25.8 165 105-327 80-247 (318)
284 3p5b_L Low density lipoprotein 98.1 0.0063 2.2E-07 56.2 29.0 229 76-367 91-326 (400)
285 2xbg_A YCF48-like protein; pho 98.0 0.0064 2.2E-07 54.5 32.7 275 11-358 33-319 (327)
286 3m0c_C LDL receptor, low-densi 98.0 0.0088 3E-07 60.2 28.7 116 104-259 471-589 (791)
287 3sov_A LRP-6, low-density lipo 98.0 0.0057 1.9E-07 54.5 24.5 230 76-367 12-244 (318)
288 4hw6_A Hypothetical protein, I 98.0 0.003 1E-07 59.1 23.5 197 104-359 139-372 (433)
289 2p9w_A MAL S 1 allergenic prot 98.0 0.002 6.7E-08 56.5 20.4 217 103-359 12-263 (334)
290 3amr_A 3-phytase; beta-propell 97.9 0.0049 1.7E-07 54.6 21.8 199 115-368 40-271 (355)
291 3amr_A 3-phytase; beta-propell 97.8 0.0053 1.8E-07 54.3 21.2 149 24-176 39-210 (355)
292 2ism_A Putative oxidoreductase 97.8 0.01 3.5E-07 53.8 23.6 71 103-176 30-114 (352)
293 3a9g_A Putative uncharacterize 97.8 0.021 7E-07 51.7 31.2 50 300-349 278-330 (354)
294 1n7d_A LDL receptor, low-densi 97.8 0.00022 7.4E-09 71.2 12.9 165 105-327 454-623 (699)
295 3m0c_C LDL receptor, low-densi 97.7 0.018 6.2E-07 58.0 25.9 207 102-364 422-635 (791)
296 1n7d_A LDL receptor, low-densi 97.7 0.00045 1.5E-08 68.9 13.2 226 76-364 385-617 (699)
297 3kya_A Putative phosphatase; s 97.5 0.06 2.1E-06 50.6 26.1 63 105-167 140-214 (496)
298 2xzh_A Clathrin heavy chain 1; 97.5 0.037 1.3E-06 48.1 30.3 269 34-364 48-335 (365)
299 4a0p_A LRP6, LRP-6, low-densit 97.5 0.1 3.5E-06 51.3 29.2 229 70-363 9-239 (628)
300 3a9g_A Putative uncharacterize 97.4 0.046 1.6E-06 49.4 22.4 72 103-176 28-114 (354)
301 3sre_A PON1, serum paraoxonase 97.4 0.042 1.4E-06 49.3 20.9 156 16-176 52-252 (355)
302 2g8s_A Glucose/sorbosone dehyd 97.4 0.078 2.7E-06 47.9 29.6 59 300-359 290-350 (353)
303 1bpo_A Protein (clathrin); cla 97.3 0.089 3E-06 47.8 31.0 271 34-364 47-334 (494)
304 2xbg_A YCF48-like protein; pho 97.3 0.091 3.1E-06 46.9 31.1 240 103-410 35-281 (327)
305 1cru_A Protein (soluble quinop 97.3 0.13 4.3E-06 48.3 34.7 76 8-84 21-99 (454)
306 2vpj_A Kelch-like protein 12; 97.2 0.034 1.2E-06 49.0 19.0 63 114-178 62-139 (301)
307 3pbp_A Nucleoporin NUP82; beta 97.2 0.13 4.5E-06 46.7 21.7 113 220-357 67-208 (452)
308 3sre_A PON1, serum paraoxonase 97.2 0.1 3.5E-06 46.8 20.7 199 105-351 51-287 (355)
309 3ii7_A Kelch-like protein 7; p 97.1 0.032 1.1E-06 49.4 17.3 63 114-178 55-129 (306)
310 3ei3_A DNA damage-binding prot 97.1 0.42 1.4E-05 50.5 33.5 101 70-176 526-636 (1158)
311 3s94_A LRP-6, low-density lipo 97.0 0.28 9.4E-06 48.1 37.6 344 14-393 84-449 (619)
312 2p9w_A MAL S 1 allergenic prot 97.0 0.068 2.3E-06 46.9 17.9 174 219-406 13-213 (334)
313 2g8s_A Glucose/sorbosone dehyd 97.0 0.17 6E-06 45.6 23.6 59 104-163 18-86 (353)
314 3sbq_A Nitrous-oxide reductase 96.9 0.13 4.5E-06 48.3 18.9 280 27-361 72-408 (638)
315 3ei3_A DNA damage-binding prot 96.9 0.62 2.1E-05 49.3 34.0 36 13-48 553-595 (1158)
316 3pbp_A Nucleoporin NUP82; beta 96.9 0.22 7.6E-06 45.2 19.9 148 110-285 27-193 (452)
317 2xn4_A Kelch-like protein 2; s 96.9 0.12 4.3E-06 45.4 18.8 63 114-178 61-135 (302)
318 3das_A Putative oxidoreductase 96.8 0.28 9.7E-06 43.7 29.8 75 6-83 24-101 (347)
319 3s25_A Hypothetical 7-bladed b 96.8 0.11 3.9E-06 45.5 17.3 198 113-396 23-240 (302)
320 1xi4_A Clathrin heavy chain; a 96.7 0.3 1E-05 51.6 22.1 271 34-363 47-333 (1630)
321 2vpj_A Kelch-like protein 12; 96.7 0.11 3.6E-06 45.8 16.9 63 114-178 14-89 (301)
322 4a0p_A LRP6, LRP-6, low-densit 96.7 0.57 1.9E-05 46.0 41.5 151 14-178 80-239 (628)
323 1zgk_A Kelch-like ECH-associat 96.7 0.14 4.9E-06 45.2 17.6 63 114-178 70-148 (308)
324 4asc_A Kelch repeat and BTB do 96.6 0.27 9.3E-06 43.5 19.0 67 110-178 41-128 (315)
325 3das_A Putative oxidoreductase 96.6 0.39 1.3E-05 42.9 26.6 265 102-397 30-326 (347)
326 3s94_A LRP-6, low-density lipo 96.5 0.73 2.5E-05 45.2 38.7 158 10-177 36-203 (619)
327 2xzh_A Clathrin heavy chain 1; 96.4 0.41 1.4E-05 41.8 26.8 200 18-260 71-291 (365)
328 1bpo_A Protein (clathrin); cla 96.4 0.52 1.8E-05 42.9 27.7 237 74-368 45-296 (494)
329 1tl2_A L10, protein (tachylect 96.2 0.38 1.3E-05 39.3 18.4 187 115-362 4-209 (236)
330 3ott_A Two-component system se 96.2 1.3 4.4E-05 44.8 29.6 196 104-363 63-262 (758)
331 2xn4_A Kelch-like protein 2; s 96.1 0.23 8E-06 43.6 15.8 53 309-364 173-232 (302)
332 3ii7_A Kelch-like protein 7; p 96.0 0.72 2.5E-05 40.5 20.4 94 77-178 70-180 (306)
333 2uvk_A YJHT; unknown function, 95.9 0.64 2.2E-05 41.9 18.1 61 310-373 286-354 (357)
334 1zgk_A Kelch-like ECH-associat 95.9 0.26 9.1E-06 43.4 15.0 53 309-364 184-243 (308)
335 3s25_A Hypothetical 7-bladed b 95.7 0.98 3.3E-05 39.5 22.3 64 109-177 109-177 (302)
336 1xi4_A Clathrin heavy chain; a 95.7 0.99 3.4E-05 48.0 19.5 142 19-177 71-236 (1630)
337 1cru_A Protein (soluble quinop 95.6 0.45 1.6E-05 44.5 15.8 53 220-282 28-87 (454)
338 3q6k_A 43.2 kDa salivary prote 95.4 1.4 4.9E-05 39.6 18.7 65 77-141 123-197 (381)
339 1tl2_A L10, protein (tachylect 95.2 0.75 2.6E-05 37.6 13.7 66 105-175 42-115 (236)
340 2woz_A Kelch repeat and BTB do 95.1 1.6 5.6E-05 38.4 20.6 66 111-178 53-138 (318)
341 2wg3_C Hedgehog-interacting pr 95.0 2.3 7.9E-05 39.8 27.3 69 14-84 14-91 (463)
342 4asc_A Kelch repeat and BTB do 94.6 2.2 7.5E-05 37.5 19.6 59 118-178 8-78 (315)
343 2zwa_A Leucine carboxyl methyl 94.4 2 6.7E-05 42.9 17.6 66 113-178 396-479 (695)
344 3sbq_A Nitrous-oxide reductase 93.3 1.8 6.2E-05 40.9 13.5 126 218-369 322-486 (638)
345 2woz_A Kelch repeat and BTB do 92.8 4.7 0.00016 35.4 15.7 92 79-178 80-186 (318)
346 2zwa_A Leucine carboxyl methyl 92.3 3.4 0.00012 41.2 15.4 148 24-178 451-637 (695)
347 2be1_A Serine/threonine-protei 92.3 0.84 2.9E-05 40.5 9.7 145 26-173 11-181 (339)
348 4hvt_A Ritya.17583.B, post-pro 91.9 11 0.00037 37.6 21.6 56 307-363 318-383 (711)
349 4hvt_A Ritya.17583.B, post-pro 86.4 28 0.00095 34.7 20.1 95 249-360 319-429 (711)
350 4gq2_M Nucleoporin NUP120; bet 84.2 28 0.00094 36.2 15.7 38 104-141 236-273 (950)
351 4gq2_M Nucleoporin NUP120; bet 83.0 4.1 0.00014 42.3 9.1 38 14-51 236-273 (950)
352 3ott_A Two-component system se 80.9 49 0.0017 33.2 37.3 245 105-405 192-445 (758)
353 2wg3_C Hedgehog-interacting pr 80.8 37 0.0013 31.7 27.6 53 104-156 14-79 (463)
354 3qhy_B Beta-lactamase inhibito 80.2 27 0.00094 29.9 22.5 89 76-176 41-129 (282)
355 2i32_E Histone regulatory homo 77.9 0.52 1.8E-05 27.7 0.3 16 504-519 38-53 (57)
356 2uvk_A YJHT; unknown function, 76.7 40 0.0014 29.9 21.5 21 24-44 19-40 (357)
357 2be1_A Serine/threonine-protei 76.1 6.2 0.00021 35.0 6.8 66 300-365 11-80 (339)
358 3zwu_A Alkaline phosphatase PH 74.4 14 0.00046 35.7 9.1 72 273-348 477-548 (592)
359 3f7f_A Nucleoporin NUP120; nuc 74.1 11 0.00037 37.1 8.3 37 15-53 223-259 (729)
360 4a9v_A PHOX; hydrolase, beta-p 72.1 23 0.00078 33.8 9.7 41 309-349 509-549 (592)
361 2z34_C Protein HIR1; histone c 68.7 1.2 4.1E-05 22.2 0.2 13 505-517 12-24 (29)
362 3q6k_A 43.2 kDa salivary prote 66.0 76 0.0026 28.6 22.6 157 13-176 86-306 (381)
363 3zwu_A Alkaline phosphatase PH 63.2 28 0.00094 33.6 8.6 59 105-163 477-548 (592)
364 4fhn_B Nucleoporin NUP120; pro 62.8 20 0.00067 38.2 8.3 38 105-142 239-276 (1139)
365 4a9v_A PHOX; hydrolase, beta-p 62.4 44 0.0015 32.0 9.5 61 104-164 476-549 (592)
366 3f7f_A Nucleoporin NUP120; nuc 50.6 28 0.00095 34.3 6.3 37 105-143 223-259 (729)
367 4fhn_B Nucleoporin NUP120; pro 47.5 9.9 0.00034 40.5 3.0 39 14-52 238-276 (1139)
368 3uc1_A DNA gyrase subunit A; D 43.9 1.7E+02 0.0057 25.7 17.7 161 12-176 93-279 (327)
369 3no0_A DNA gyrase subunit A; D 43.5 1.5E+02 0.0052 25.1 17.5 158 12-176 66-246 (276)
370 1q47_A Semaphorin 3A; beta pro 36.5 1.6E+02 0.0055 27.6 9.0 57 300-356 422-487 (495)
371 3al9_A Plexin-A2; beta-propell 28.3 1E+02 0.0035 29.4 6.3 58 299-356 413-476 (539)
372 3uc1_A DNA gyrase subunit A; D 27.3 3.1E+02 0.011 23.9 24.1 72 103-175 94-175 (327)
373 3b7f_A Glycosyl hydrolase, BNR 23.1 4E+02 0.014 23.7 26.9 266 13-338 54-390 (394)
374 4gz8_A Semaphorin-3A; multi-do 21.1 3.5E+02 0.012 26.5 8.5 57 300-356 430-495 (667)
375 4d9s_A UVB-resistance protein 20.9 4.6E+02 0.016 23.6 34.5 156 13-176 15-201 (406)
376 3al9_A Plexin-A2; beta-propell 20.7 2.3E+02 0.008 26.9 7.1 67 105-171 401-476 (539)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-47 Score=379.88 Aligned_cols=412 Identities=16% Similarity=0.154 Sum_probs=294.3
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCcccc--ccc----------------------------
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQK--KIP---------------------------- 52 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~--~~~---------------------------- 52 (519)
+..+..+.+|...|++++|||+|++||+|+.|++|+|||+.+++... .+.
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 45667778999999999999999999999999999999987543211 110
Q ss_pred -------cccccccccccCcceeEEEEccC----------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCC
Q 010051 53 -------TASYQNSLSYHGSAINILRFSPC----------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDG 115 (519)
Q Consensus 53 -------~~~~~~~~~~~~~~v~~~~~~~~----------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 115 (519)
.......+.+|...|++++|+|+ |+.|++||.... +....+.+|...|++++|+|+|
T Consensus 129 ~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~------~~~~~l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 129 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF------KFKSTFGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB------EEEEEECCCSSCEEEEEECTTS
T ss_pred eEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC------eEeeeeccccCceEEEEECCCC
Confidence 01122346788899999999987 477999998765 6777889999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCceEEEec-------ccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccc-
Q 010051 116 AFLLSGSVDNSCIIWDVNKGSVLQILD-------AHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNY- 187 (519)
Q Consensus 116 ~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~- 187 (519)
++|++|+.|++|++||+.+++.+..+. +|.+.|.+++|+|++++|++++.|++|++||+.+++.........
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC
Confidence 999999999999999999999888874 799999999999999999999999999999998765432211100
Q ss_pred --eeeEEEeccCcccccCCcccccee---------eecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEe
Q 010051 188 --VCQHVITKAGQHSTDDSKSAKNHL---------FHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFS 256 (519)
Q Consensus 188 --~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~ 256 (519)
.....+...+.............+ .....|...|.+++|+|+|++|++++.+ +.|++||
T Consensus 283 ~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D----------~~v~~Wd 352 (611)
T 1nr0_A 283 IEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAE----------GHINSWD 352 (611)
T ss_dssp GGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT----------SCEEEEE
T ss_pred ccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC----------CcEEEEE
Confidence 000000001111111111111111 2234677889999999999999998887 6899999
Q ss_pred ccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCc------------------------------------------
Q 010051 257 RKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGF------------------------------------------ 294 (519)
Q Consensus 257 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~------------------------------------------ 294 (519)
+...........+|...|.+++|++++.. ++++.++.
T Consensus 353 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~l-~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~ 431 (611)
T 1nr0_A 353 ISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY 431 (611)
T ss_dssp TTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEES
T ss_pred CCCCceeeecccCCcceEEEEEECCCCcE-EEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeC
Confidence 87643322222457777777777665432 22211110
Q ss_pred ------------------------ccccceEEEEEecCCeEEEEeCCCCCce--EEEeccccccEEEEEEcCCCCEEEEE
Q 010051 295 ------------------------FKLPYRLIFAIATLNSLYIYDTESVPPI--AILAGLHYAAITDIAWSNNARYLALS 348 (519)
Q Consensus 295 ------------------------~~~~~~~~~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~i~~~~~s~~g~~l~~~ 348 (519)
+..+.+++++++.|+.|++||+.++... .. .+ |...|++++|+|+|++|+++
T Consensus 432 ~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~-h~~~v~~v~fspdg~~las~ 509 (611)
T 1nr0_A 432 KHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IV-HPAEITSVAFSNNGAFLVAT 509 (611)
T ss_dssp SEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EE-CSSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cC-CCCceEEEEECCCCCEEEEE
Confidence 0112468999999999999999876542 33 45 99999999999999999999
Q ss_pred eCCCcEEEEEecC-CcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCCCCccc-ccc-c-------
Q 010051 349 SQDGYCTLVEFEN-DELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKEPDKRK-TEA-E------- 417 (519)
Q Consensus 349 ~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~~~~~~-~~~-~------- 417 (519)
+.|++|++|++.+ ++........+ +...|.+++|+|||.+|++++.|+.| +|+........ ... .
T Consensus 510 s~d~~v~~w~~~~~~~~~~~~~~~~----H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~ 585 (611)
T 1nr0_A 510 DQSRKVIPYSVANNFELAHTNSWTF----HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVN 585 (611)
T ss_dssp ETTSCEEEEEGGGTTEESCCCCCCC----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEE
T ss_pred cCCCCEEEEEcCCCCceeeeeeeee----cccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCee
Confidence 9999999999987 43322111112 34689999999999999999999888 77765432111 000 0
Q ss_pred ----cCCCceEEeccccceeeeecc
Q 010051 418 ----TKDDETAINGSIAAESRLIEP 438 (519)
Q Consensus 418 ----~~~~~~~~~~~~~~~~~~~~~ 438 (519)
.++.. +++++.|+.+++|+.
T Consensus 586 ~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 586 SVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEEEEETTE-EEEEETTSCEEEEEC
T ss_pred EEEEcCCCE-EEEecCCCCEEEEec
Confidence 11222 667777888887753
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9.7e-46 Score=367.67 Aligned_cols=352 Identities=15% Similarity=0.167 Sum_probs=264.2
Q ss_pred EEecCCCCCEEEEEEecCCC-EEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------C
Q 010051 7 QINWHDTKPVLTLDFHPISG-LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------G 76 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~-~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~ 76 (519)
..+.+|.+.|++++|+|++. +|++|+.|++|+|||..+++.. ..+.+|...|++++|+|+ |
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~---------~~l~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK---------STFGEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE---------EEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe---------eeeccccCceEEEEECCCCCEEEEEECC
Confidence 34568999999999999997 6999999999999998776543 346779999999999998 5
Q ss_pred CeEEEEEcccCCCcccceeeeccc-------cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEE----------
Q 010051 77 GELIIWKLHTTETGQAWKVLKNLS-------FHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQ---------- 139 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~---------- 139 (519)
+.|+|||+.++ +....+. +|...|.+++|+|+|++|++++.|++|++||+.+++.+.
T Consensus 212 ~~i~lwd~~~g------~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 212 GTIVLYNGVDG------TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp SCEEEEETTTC------CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred CcEEEEECCCC------cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccc
Confidence 88999999876 3344442 799999999999999999999999999999998876543
Q ss_pred ---------------------------------EecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCcccccc--
Q 010051 140 ---------------------------------ILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEK-- 184 (519)
Q Consensus 140 ---------------------------------~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-- 184 (519)
.+.+|...|++++|+|++++|++++.|+.|++||+.+++......
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~ 365 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 365 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCS
T ss_pred eeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccC
Confidence 335788999999999999999999999999999998765322110
Q ss_pred -ccceeeEEEeccCcccccCC--------------------------------------------ccccceeee-----c
Q 010051 185 -MNYVCQHVITKAGQHSTDDS--------------------------------------------KSAKNHLFH-----D 214 (519)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~-----~ 214 (519)
........+...+ ...... ......++. .
T Consensus 366 h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~ 444 (611)
T 1nr0_A 366 HATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTE 444 (611)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEE
T ss_pred CcceEEEEEECCCC-cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceee
Confidence 0000000000000 000000 000000111 0
Q ss_pred CCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc-ccccCCCCCCCeEEEEEcCCcccccccCCCC
Q 010051 215 ETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-PALQLPGASKPVVAVRFCPLAFNLRESNSAG 293 (519)
Q Consensus 215 ~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 293 (519)
..+...+.+++|+|+|++|++++.+ +.|++|++..... .... .+|...|++++|+|+|
T Consensus 445 ~~~~~~v~~va~spdg~~lasgs~D----------~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg---------- 503 (611)
T 1nr0_A 445 VPISYNSSCVALSNDKQFVAVGGQD----------SKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNG---------- 503 (611)
T ss_dssp EECSSCEEEEEECTTSCEEEEEETT----------SEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTS----------
T ss_pred eecCCCceEEEEeCCCCEEEEeCCC----------CeEEEEEccCCceeeeec-cCCCCceEEEEECCCC----------
Confidence 1134567899999999999998887 6999999875422 1222 5789999999999998
Q ss_pred cccccceEEEEEecCCeEEEEeCCC-CCceEE-EeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeec
Q 010051 294 FFKLPYRLIFAIATLNSLYIYDTES-VPPIAI-LAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLS 371 (519)
Q Consensus 294 ~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 371 (519)
+++++++.|+.|++|++.+ ++.+.. +...|...|++++|+|||++||+++.|++|++|++..+.......+.
T Consensus 504 ------~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~ 577 (611)
T 1nr0_A 504 ------AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG 577 (611)
T ss_dssp ------SEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETT
T ss_pred ------CEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhc
Confidence 6688889999999999987 554443 22239999999999999999999999999999999876422212344
Q ss_pred CCcccccCCCCcccccCCccEEEeecCCcee-eec
Q 010051 372 GNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAE 405 (519)
Q Consensus 372 ~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~ 405 (519)
+|. ...+.+++|+|++. |++++.|+.| +|+
T Consensus 578 ~h~---~~~v~~v~fs~d~~-l~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 578 AHA---MSSVNSVIWLNETT-IVSAGQDSNIKFWN 608 (611)
T ss_dssp SST---TSCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred cCc---ccCeeEEEEcCCCE-EEEecCCCCEEEEe
Confidence 442 36899999999999 8888888877 665
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.8e-45 Score=330.52 Aligned_cols=299 Identities=17% Similarity=0.204 Sum_probs=251.4
Q ss_pred CCCCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEE
Q 010051 1 MKGGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELI 80 (519)
Q Consensus 1 ~~~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 80 (519)
|+-...+.+.+|.+.|++++|+|++++||+|+.||.|+|||+.++..
T Consensus 1 ~~l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~--------------------------------- 47 (304)
T 2ynn_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE--------------------------------- 47 (304)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE---------------------------------
T ss_pred CcceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce---------------------------------
Confidence 45566778889999999999999999999999999999999877642
Q ss_pred EEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeE
Q 010051 81 IWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYV 160 (519)
Q Consensus 81 vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 160 (519)
+..+..|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|
T Consensus 48 ---------------~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 112 (304)
T 2ynn_A 48 ---------------VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV 112 (304)
T ss_dssp ---------------EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred ---------------eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEE
Confidence 23344578889999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEecCC
Q 010051 161 ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGS 239 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~ 239 (519)
++++.||+|++||++.+... ......|...|.+++|+| ++..|++++.+
T Consensus 113 ~sgs~D~~v~lWd~~~~~~~------------------------------~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 113 LSGSDDLTVKLWNWENNWAL------------------------------EQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp EEEETTSCEEEEEGGGTTEE------------------------------EEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred EEECCCCeEEEEECCCCcch------------------------------hhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 99999999999998764210 011234667899999999 67889988877
Q ss_pred cceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCC
Q 010051 240 YKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV 319 (519)
Q Consensus 240 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~ 319 (519)
+.|++||+...........+|...+..+.|+|... + .++++++.|+.|++||+.++
T Consensus 163 ----------~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~------~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 163 ----------RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD--------K------PYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp ----------SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTT--------C------CEEEEEETTSEEEEEETTTT
T ss_pred ----------CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCC--------C------CEEEEEcCCCeEEEEeCCCC
Confidence 79999999766555555567778899999987431 1 57899999999999999999
Q ss_pred CceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCcc--EEEeec
Q 010051 320 PPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDM--IIEAST 397 (519)
Q Consensus 320 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~l~~~~ 397 (519)
+++..+.+ |...|++++|+|++++|++++.||+|++||+.+.+....+. .+ ...+.+++|+|++. ++++++
T Consensus 219 ~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~asg~ 291 (304)
T 2ynn_A 219 SCVATLEG-HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN--VG----LERSWCIATHPTGRKNYIASGF 291 (304)
T ss_dssp EEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC--CS----SSSEEEEEECTTCGGGCEEEEE
T ss_pred ccceeeCC-CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc--CC----CccEEEEEECCCCCceEEEEec
Confidence 99999999 99999999999999999999999999999998876544432 22 35678899999875 689999
Q ss_pred CCceeeecCCC
Q 010051 398 NDKLVTAETKE 408 (519)
Q Consensus 398 ~d~~i~~~~~~ 408 (519)
+++.+++....
T Consensus 292 ~~g~~~~~~~~ 302 (304)
T 2ynn_A 292 DNGFTVLSLGN 302 (304)
T ss_dssp TTEEEEEECC-
T ss_pred CCceEEEEecc
Confidence 99998877543
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-45 Score=344.56 Aligned_cols=279 Identities=20% Similarity=0.355 Sum_probs=247.8
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CC
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GG 77 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~ 77 (519)
..+.+|.++|++++|+|++++||+|+.||+|+|||+.+++... .+.+|...|.+++|+|+ |+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~---------~l~~h~~~V~~v~~~~~~~~l~sgs~D~ 172 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER---------TLKGHTDSVQDISFDHSGKLLASCSADM 172 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE---------EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE---------EEeccCCcEEEEEEcCCCCEEEEEeCCC
Confidence 4567899999999999999999999999999999999887544 36679999999999987 58
Q ss_pred eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCC
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLS 157 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 157 (519)
.|++||+.+. +.+..+.+|...|.+++|+|++++|++|+.|++|++||+.++.++..+.+|...|.++.|+|++
T Consensus 173 ~i~iwd~~~~------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 173 TIKLWDFQGF------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 (410)
T ss_dssp CCCEEETTSS------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred eEEEEeCCCC------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCC
Confidence 8999999876 6788889999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC--------
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD-------- 229 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~-------- 229 (519)
.+|++++.|+.|++||+.+.+.. .....+...|.+++|+|+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~~~~-------------------------------~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATKECK-------------------------------AELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp SEEEEEETTSCEEEEETTTCCEE-------------------------------EEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred CEEEEEcCCCeEEEEECCCCcee-------------------------------eEecCCCceEEEEEEcCcccccchhh
Confidence 99999999999999999876421 111245567889999986
Q ss_pred ------------CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccc
Q 010051 230 ------------GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKL 297 (519)
Q Consensus 230 ------------g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~ 297 (519)
|.++++++.+ +.|++||+... .++..+.+|...|.+++|+|++
T Consensus 296 ~~~~~~~~~~~~g~~l~sgs~D----------~~i~iwd~~~~-~~~~~~~~h~~~v~~v~~~~~g-------------- 350 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLSGSRD----------KTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGG-------------- 350 (410)
T ss_dssp CCSCC-------CCEEEEEETT----------SEEEEEETTTT-EEEEEEECCSSCEEEEEECSSS--------------
T ss_pred hccccccccCCCCCEEEEEeCC----------CeEEEEECCCC-ceEEEEECCCCcEEEEEEcCCC--------------
Confidence 5678887776 79999999754 5566778899999999999998
Q ss_pred cceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q 010051 298 PYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEF 359 (519)
Q Consensus 298 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~ 359 (519)
+++++++.|+.|++||+.+++++..+.+ |...|++++|+|++.+|++|+.||+|++|++
T Consensus 351 --~~l~s~s~D~~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 351 --KFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp --SCEEEEETTTEEEEECCTTSCCCEEEEC-CSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred --CEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 5688899999999999999999999998 9999999999999999999999999999986
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=330.19 Aligned_cols=282 Identities=20% Similarity=0.290 Sum_probs=246.8
Q ss_pred eEEecCCCCCEEEEEEecC----CCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC------
Q 010051 6 LQINWHDTKPVLTLDFHPI----SGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC------ 75 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~----~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 75 (519)
++...+|.+.|++++|+|+ +.+||+|+.|++|+||++..+... ....+.+|...|.+++|+++
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~-------~~~~l~gh~~~v~~~~~~~~~~~l~s 97 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD-------LQWSLEGHQLGVVSVDISHTLPIAAS 97 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE-------EEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee-------eeeeeccCCCCEEEEEECCCCCEEEE
Confidence 3455789999999999985 569999999999999999876532 12346789999999999887
Q ss_pred ---CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEE
Q 010051 76 ---GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVA 152 (519)
Q Consensus 76 ---~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 152 (519)
|+.|++||+.++ +.+..+..|...+.+++|+|++++|++|+.||.|++|++.+++....+..|...|.+++
T Consensus 98 ~s~D~~i~lWd~~~~------~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 98 SSLDAHIRLWDLENG------KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp EETTSEEEEEETTTT------EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred EeCCCcEEEEECCCC------CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 699999999887 67777888899999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe
Q 010051 153 WDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF 232 (519)
Q Consensus 153 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 232 (519)
|+|++++|++++.||.|++||+++++.. .....+...|.+++|+|++++
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~~~~-------------------------------~~~~~h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATGKLL-------------------------------HTLEGHAMPIRSLTFSPDSQL 220 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEE-------------------------------EEECCCSSCCCEEEECTTSCE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEE-------------------------------EEEcccCCceeEEEEcCCCCE
Confidence 9999999999999999999999876421 112245677899999999999
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
|++++.+ +.|++||+... .....+.+|...|.+++|+|++ .++++++.|+.|+
T Consensus 221 l~s~s~d----------g~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp~~----------------~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 221 LVTASDD----------GYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDD----------------THFVSSSSDKSVK 273 (321)
T ss_dssp EEEECTT----------SCEEEEETTTC-CEEEEECCCSSCEEEEEECTTS----------------SEEEEEETTSCEE
T ss_pred EEEEcCC----------CeEEEEECCCc-ceeEEEcCCCCceEEEEECCCC----------------CEEEEEeCCCcEE
Confidence 9998877 68999999754 4566788999999999999998 6688999999999
Q ss_pred EEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q 010051 313 IYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEF 359 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~ 359 (519)
+||+.+++++..+.+ |...|++++|+|++++|++++.||.|+|||+
T Consensus 274 iwd~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 274 VWDVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEeCCCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 999999999999998 9999999999999999999999999999996
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-43 Score=325.77 Aligned_cols=284 Identities=17% Similarity=0.247 Sum_probs=243.8
Q ss_pred CeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 4 GTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 4 ~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
.....+.+|.+.|++++|+|++++|++|+.||+|+|||+.+++.... +..|...|.+++|+|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~---------~~~~~~~v~~~~~s~~~~~l~s~~ 116 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHA---------IPLRSSWVMTCAYAPSGNYVACGG 116 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE---------EECSSSCEEEEEECTTSSEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceE---------eecCCccEEEEEECCCCCEEEEEe
Confidence 34566789999999999999999999999999999999988875543 4558888999999997
Q ss_pred -CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEc
Q 010051 76 -GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWD 154 (519)
Q Consensus 76 -~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 154 (519)
++.|++|++.+... .......+.+|...|.++.|++++. |++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 117 ~d~~v~iw~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 193 (340)
T 1got_B 117 LDNICSIYNLKTREG--NVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193 (340)
T ss_dssp TTCEEEEEETTTCSB--SCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCCeEEEEECccCCC--cceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEEC
Confidence 58899999976532 2245667788999999999998775 8899999999999999999999999999999999999
Q ss_pred CCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEE
Q 010051 155 PLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLL 234 (519)
Q Consensus 155 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 234 (519)
|++++|++++.||.|++||++++... .....+...|.+++|+|++.+|+
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~-------------------------------~~~~~h~~~v~~v~~~p~~~~l~ 242 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCR-------------------------------QTFTGHESDINAICFFPNGNAFA 242 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEE-------------------------------EEECCCSSCEEEEEECTTSSEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeE-------------------------------EEEcCCcCCEEEEEEcCCCCEEE
Confidence 99999999999999999999876421 11224567799999999999999
Q ss_pred EecCCcceeeeecccceEEEEeccCCCcccccC--CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 235 VPAGSYKISSMSESINSAYIFSRKDLSRPALQL--PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 235 ~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
+++.+ +.+++||++.... ...+ ..+...|.+++|+|++ +++++++.|+.|+
T Consensus 243 s~s~d----------~~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~~g----------------~~l~~g~~d~~i~ 295 (340)
T 1got_B 243 TGSDD----------ATCRLFDLRADQE-LMTYSHDNIICGITSVSFSKSG----------------RLLLAGYDDFNCN 295 (340)
T ss_dssp EEETT----------SCEEEEETTTTEE-EEEECCTTCCSCEEEEEECTTS----------------SEEEEEETTSEEE
T ss_pred EEcCC----------CcEEEEECCCCcE-EEEEccCCcccceEEEEECCCC----------------CEEEEECCCCeEE
Confidence 98877 6999999976432 2222 2344579999999998 6688899999999
Q ss_pred EEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010051 313 IYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVE 358 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd 358 (519)
+||+.+++.+..+.+ |...|++++|+|+|.+|++|+.||.|+|||
T Consensus 296 vwd~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 296 VWDALKADRAGVLAG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETTTCCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEcccCcEeeEeec-CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999998 999999999999999999999999999996
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.2e-43 Score=347.09 Aligned_cols=396 Identities=22% Similarity=0.327 Sum_probs=293.6
Q ss_pred CCCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC-----
Q 010051 2 KGGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG----- 76 (519)
Q Consensus 2 ~~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----- 76 (519)
.+..++.+.+|.+.|++++|+||+++||+++.|++|+|||.. ++.+. .+.+|...|.+++|+|++
T Consensus 46 ~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~-~~~~~---------~~~~~~~~v~~~~~s~d~~~l~~ 115 (577)
T 2ymu_A 46 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQ---------TLTGHSSSVRGVAFSPDGQTIAS 115 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEE---------EECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC-CCEEE---------EEECCCCCEEEEEECCCCCEEEE
Confidence 456778889999999999999999999999999999999964 44332 244556666666666542
Q ss_pred --------------------------------------------------------------------------------
Q 010051 77 -------------------------------------------------------------------------------- 76 (519)
Q Consensus 77 -------------------------------------------------------------------------------- 76 (519)
T Consensus 116 ~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 195 (577)
T 2ymu_A 116 ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTI 195 (577)
T ss_dssp EETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEE
Confidence
Q ss_pred ------CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEE
Q 010051 77 ------GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQG 150 (519)
Q Consensus 77 ------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 150 (519)
+.|++|+... +.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+
T Consensus 196 ~~~~~d~~v~~w~~~~-------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~ 267 (577)
T 2ymu_A 196 ASASDDKTVKLWNRNG-------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNG 267 (577)
T ss_dssp EEEETTSEEEEECTTS-------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEE
T ss_pred EEEcCCCEEEEEeCCC-------cEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEE
Confidence 3444444321 345566779999999999999999999999999999996 67788889999999999
Q ss_pred EEEcCCCCeEEEeeCCCeEEEEecCCCCcccccccc-ceeeEEEeccCcccccCCccccceee--------ecCCCccee
Q 010051 151 VAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMN-YVCQHVITKAGQHSTDDSKSAKNHLF--------HDETLPSFF 221 (519)
Q Consensus 151 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~i 221 (519)
++|+|+++.|++++.|+.|++|+............. ......+.+.+..+..........++ ....+...+
T Consensus 268 v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v 347 (577)
T 2ymu_A 268 VAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSV 347 (577)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCE
T ss_pred EEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCE
Confidence 999999999999999999999997543221111111 11112233333333332222233333 234567789
Q ss_pred eEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccc----
Q 010051 222 RRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKL---- 297 (519)
Q Consensus 222 ~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~---- 297 (519)
.+++|+|+|+++++++.+ +.+++|+.. ......+.+|...|.+++|+|+++++++++.++.+.+
T Consensus 348 ~~~~~s~~g~~l~~~~~d----------g~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~ 415 (577)
T 2ymu_A 348 WGVAFSPDGQTIASASDD----------KTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 415 (577)
T ss_dssp EEEEECTTSSEEEEEETT----------SEEEEEETT--CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEEEECCCCCEEEEEeCC----------CEEEEEcCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 999999999999998877 689999964 3556677889999999999999999999988876543
Q ss_pred ---------------------cceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEE
Q 010051 298 ---------------------PYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTL 356 (519)
Q Consensus 298 ---------------------~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~v 356 (519)
+.+++++++.|+.|++||. +++.+..+.+ |...|++++|+|++++|++++.|+.|++
T Consensus 416 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~-~~~~v~~~~~spd~~~las~~~d~~i~i 493 (577)
T 2ymu_A 416 GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKL 493 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEEC-CSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence 2367889999999999996 5677888888 9999999999999999999999999999
Q ss_pred EEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCCCCcc--------cc-ccccCCCceEEe
Q 010051 357 VEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKEPDKR--------KT-EAETKDDETAIN 426 (519)
Q Consensus 357 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~~~~~--------~~-~~~~~~~~~~~~ 426 (519)
|+... + ....+.+|. ..+.+++|+||+.+|++++.|+.| +|+...+... ++ ....++...+++
T Consensus 494 w~~~~-~--~~~~~~~h~----~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 494 WNRNG-Q--LLQTLTGHS----SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIAS 566 (577)
T ss_dssp EETTS-C--EEEEEECCS----SCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred EcCCC-C--EEEEEeCCC----CCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 99643 2 233444443 678999999999999999999887 7764321111 11 112334445555
Q ss_pred ccccceeeee
Q 010051 427 GSIAAESRLI 436 (519)
Q Consensus 427 ~~~~~~~~~~ 436 (519)
++.|+..++|
T Consensus 567 ~~~D~~i~~W 576 (577)
T 2ymu_A 567 ASSDKTVKLW 576 (577)
T ss_dssp EETTSCEEEE
T ss_pred EeCCCEEEEe
Confidence 6666666655
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.1e-44 Score=331.48 Aligned_cols=290 Identities=15% Similarity=0.160 Sum_probs=230.7
Q ss_pred ecCCCCCEEEEEEecCCCEEEEEcC------CCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------
Q 010051 9 NWHDTKPVLTLDFHPISGLLATGGA------DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC------- 75 (519)
Q Consensus 9 ~~~h~~~V~~~~~sp~~~~la~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------- 75 (519)
...|.+.|++++|||||++||+|+. |+.|++|+..++.....+ ......|...|.+++|+|+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~-----~~~~~~~~~~V~~~~~s~d~~~l~~s 112 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL-----CTAGVQTEAGVTDVAWVSEKGILVAS 112 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG-----CSEEEECSSCEEEEEEETTTEEEEEE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE-----ecccCCCCCCEEEEEEcCCCCEEEEE
Confidence 3469999999999999999999997 778999988877654432 2234568889999999998
Q ss_pred -CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEc
Q 010051 76 -GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWD 154 (519)
Q Consensus 76 -~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 154 (519)
++.|+|||+.++.... .......+|...|++++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.+++|+
T Consensus 113 ~dg~v~lWd~~~~~~~~--~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 113 DSGAVELWEILEKESLL--VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp TTSCEEEC--------C--CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCCEEEEeeccccceeE--EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 5899999998763221 1122345799999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCC-Ce
Q 010051 155 PLSK-YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDG-SF 232 (519)
Q Consensus 155 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~ 232 (519)
+++. +|++++.||.|++||+++++..... ....+...+.+++|+|++ .+
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~-----------------------------~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKPKPATRI-----------------------------DFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSSSCBCBC-----------------------------CCTTCCSCEEEEEECTTSTTE
T ss_pred cCCCceeeeeccCCceEEEECCCCceeeee-----------------------------eeccccccccchhhhhcccce
Confidence 9875 7899999999999999887532211 112344668899999985 56
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
|++++.+ +.|++||++.. .....+.+|...|++++|+|++. ++|++++.|++|+
T Consensus 242 la~g~~d----------~~i~~wd~~~~-~~~~~~~~~~~~v~~l~~sp~~~---------------~~lasgs~D~~i~ 295 (357)
T 4g56_B 242 FACGDET----------GNVSLVNIKNP-DSAQTSAVHSQNITGLAYSYHSS---------------PFLASISEDCTVA 295 (357)
T ss_dssp EEEEESS----------SCEEEEESSCG-GGCEEECCCSSCEEEEEECSSSS---------------CCEEEEETTSCEE
T ss_pred EEEeecc----------cceeEEECCCC-cEeEEEeccceeEEEEEEcCCCC---------------CEEEEEeCCCEEE
Confidence 6666665 68999999764 55677889999999999999874 3478899999999
Q ss_pred EEeCCCCCceEEEeccccccEEEEEEcC-CCCEEEEEeCCCcEEEEEecCC
Q 010051 313 IYDTESVPPIAILAGLHYAAITDIAWSN-NARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
|||+.+++++..+ + |...|++++|+| ++++|++++.||+|++|++...
T Consensus 296 iwd~~~~~~~~~~-~-H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 296 VLDADFSEVFRDL-S-HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EECTTSCEEEEEC-C-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEECCCCcEeEEC-C-CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999998877655 5 999999999998 7999999999999999999754
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.2e-43 Score=324.50 Aligned_cols=287 Identities=16% Similarity=0.213 Sum_probs=243.6
Q ss_pred CeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 4 GTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 4 ~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
.....+.+|.+.|++++|+|++++||+|+.||+|+|||..+++.... +..|...|.+++|+|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~---------~~~~~~~v~~~~~sp~g~~lasg~ 125 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHA---------VTMPCTWVMACAYAPSGCAIACGG 125 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---------EECSSSCCCEEEECTTSSEEEEES
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceE---------EecCCCCEEEEEECCCCCEEEEee
Confidence 34567789999999999999999999999999999999988775443 4457788999999998
Q ss_pred -CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEc
Q 010051 76 -GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWD 154 (519)
Q Consensus 76 -~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 154 (519)
++.+++|++..............+.+|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.++.|+
T Consensus 126 ~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~ 205 (354)
T 2pbi_B 126 LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLA 205 (354)
T ss_dssp TTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEE
Confidence 4788999987653332223455667899999999999999999999999999999999999999999999999999998
Q ss_pred C--CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe
Q 010051 155 P--LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF 232 (519)
Q Consensus 155 ~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 232 (519)
| ++++|++++.||.|++||+++++.. .....|...|.+++|+|++.+
T Consensus 206 ~~~~g~~l~sgs~Dg~v~~wd~~~~~~~-------------------------------~~~~~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 206 PSETGNTFVSGGCDKKAMVWDMRSGQCV-------------------------------QAFETHESDVNSVRYYPSGDA 254 (354)
T ss_dssp CCSSCCEEEEEETTSCEEEEETTTCCEE-------------------------------EEECCCSSCEEEEEECTTSSE
T ss_pred eCCCCCEEEEEeCCCeEEEEECCCCcEE-------------------------------EEecCCCCCeEEEEEeCCCCE
Confidence 7 4689999999999999999876421 112245678999999999999
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccC--CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCe
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQL--PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNS 310 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~ 310 (519)
|++++.+ +.+++||++.... ...+ ..+...+.+++|+|++ .++++++.|+.
T Consensus 255 l~s~s~D----------~~v~lwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~g----------------~~l~~g~~d~~ 307 (354)
T 2pbi_B 255 FASGSDD----------ATCRLYDLRADRE-VAIYSKESIIFGASSVDFSLSG----------------RLLFAGYNDYT 307 (354)
T ss_dssp EEEEETT----------SCEEEEETTTTEE-EEEECCTTCCSCEEEEEECTTS----------------SEEEEEETTSC
T ss_pred EEEEeCC----------CeEEEEECCCCcE-EEEEcCCCcccceeEEEEeCCC----------------CEEEEEECCCc
Confidence 9998877 6999999975432 2222 2334578999999998 66888899999
Q ss_pred EEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010051 311 LYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVE 358 (519)
Q Consensus 311 i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd 358 (519)
|++||+.+++.+..+.+ |...|++++|+|+|++|++|+.||+|+||+
T Consensus 308 i~vwd~~~~~~~~~l~~-h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 308 INVWDVLKGSRVSILFG-HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTTCSEEEEECC-CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCceEEEEEC-CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999988 999999999999999999999999999995
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=325.16 Aligned_cols=295 Identities=18% Similarity=0.175 Sum_probs=228.7
Q ss_pred cCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccc--cccccccccccccccCcceeEEEEccC--------CCeE
Q 010051 10 WHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQ--KKIPTASYQNSLSYHGSAINILRFSPC--------GGEL 79 (519)
Q Consensus 10 ~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~i 79 (519)
..|...|.+++|+|||++|++++ |+++++||....... ...+..........+...|.+++|+|+ +|.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v 105 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAV 105 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEE
Confidence 35678899999999999999887 778888874321110 000111112223346678999999987 6999
Q ss_pred EEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCC-
Q 010051 80 IIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSK- 158 (519)
Q Consensus 80 ~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~- 158 (519)
+|||+.++.... .....+.+|...|++++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|++++.
T Consensus 106 ~lWd~~~~~~~~--~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 106 ELWELDENETLI--VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEECTTSSCE--EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEEeccCCCcee--EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 999998774322 22234558999999999999999999999999999999999999999999999999999999875
Q ss_pred eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCC-CeEEEec
Q 010051 159 YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDG-SFLLVPA 237 (519)
Q Consensus 159 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~ 237 (519)
+|++++.|++|++||+++++.... +....+...+.+++|+|++ .++++++
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKPASQ-----------------------------IGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSCEEE-----------------------------CC----CCCEEEEEECSSCTTEEEEEE
T ss_pred ceeeeccccccccccccccceeee-----------------------------eecceeeccceeeeecCCCCcceEEec
Confidence 689999999999999988753211 1111233457899999964 5667766
Q ss_pred CCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC
Q 010051 238 GSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE 317 (519)
Q Consensus 238 ~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~ 317 (519)
.+ +.|++||++.. .++..+.+|...|++++|+|++. ++|++++.|++|+|||+.
T Consensus 235 ~d----------g~v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp~g~---------------~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 235 EN----------GTVSLVDTKST-SCVLSSAVHSQCVTGLVFSPHSV---------------PFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp TT----------SEEEEEESCC---CCEEEECCSSCEEEEEECSSSS---------------CCEEEEETTSCEEEECTT
T ss_pred cC----------CcEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCC---------------eEEEEEeCCCeEEEEECC
Confidence 66 69999999754 56777889999999999999874 347889999999999999
Q ss_pred CCCceEEEeccccccEEEEEEcCCCC-EEEEEeCCCcEEEEEecCCcc
Q 010051 318 SVPPIAILAGLHYAAITDIAWSNNAR-YLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~~~ 364 (519)
+++++ .+.+ |...|++++|+|+++ +|++++.||+|++|++.+..+
T Consensus 289 ~~~~~-~~~~-H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 289 LSELF-RSQA-HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CCEEE-EECC-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCcEE-EEcC-CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 88754 5667 999999999999986 577899999999999987543
No 11
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-42 Score=343.90 Aligned_cols=317 Identities=23% Similarity=0.352 Sum_probs=268.4
Q ss_pred CCCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC------
Q 010051 2 KGGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC------ 75 (519)
Q Consensus 2 ~~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 75 (519)
.+..+..+.+|...|++++|+|++++|++++.|+.|++|+... +. ...+.+|...|.+++|+|+
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~---------~~~~~~h~~~v~~~~~~~~~~~l~t 320 (577)
T 2ymu_A 251 NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QL---------LQTLTGHSSSVWGVAFSPDGQTIAS 320 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CE---------EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cE---------EEEEecCCCCeEEEEECCCCCEEEE
Confidence 3456677789999999999999999999999999999999643 32 2236679999999999997
Q ss_pred ---CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEE
Q 010051 76 ---GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVA 152 (519)
Q Consensus 76 ---~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 152 (519)
++.|++|++... .+..+.+|...+.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++
T Consensus 321 ~~~d~~i~~w~~~~~-------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~ 392 (577)
T 2ymu_A 321 ASDDKTVKLWNRNGQ-------HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVA 392 (577)
T ss_dssp EETTSCEEEEETTSC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEE
T ss_pred EeCCCeEEEEeCCCC-------eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEE
Confidence 478999998643 45667789999999999999999999999999999995 6788888999999999999
Q ss_pred EcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe
Q 010051 153 WDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF 232 (519)
Q Consensus 153 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 232 (519)
|+|++++|++++.|+.|++||..... . .....+...|.+++|+|++++
T Consensus 393 ~s~dg~~l~~~~~d~~v~~~~~~~~~-----------~---------------------~~~~~~~~~v~~~~~s~d~~~ 440 (577)
T 2ymu_A 393 FSPDGQTIASASDDKTVKLWNRNGQL-----------L---------------------QTLTGHSSSVWGVAFSPDDQT 440 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTTCCE-----------E---------------------EEEECCSSCEEEEEECTTSSE
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCCE-----------E---------------------EEecCCCCCeEEEEECCCCCE
Confidence 99999999999999999999954321 0 111245677899999999999
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
|++++.+ +.+++|+.. ......+.+|...|++++|+|++ +++++++.|+.|+
T Consensus 441 l~~~~~d----------~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~----------------~~las~~~d~~i~ 492 (577)
T 2ymu_A 441 IASASDD----------KTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDG----------------QTIASASDDKTVK 492 (577)
T ss_dssp EEEEETT----------SEEEEEETT--SCEEEEEECCSSCEEEEEECTTS----------------CEEEEEETTSEEE
T ss_pred EEEEcCC----------CEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCC----------------CEEEEEeCCCEEE
Confidence 9998877 689999974 35566778899999999999998 6688888999999
Q ss_pred EEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccE
Q 010051 313 IYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMI 392 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 392 (519)
+||. +++++..+.+ |...|++++|+|+|++|++++.||.|+|||... + ....+.+|. ..|.+++|+|||.+
T Consensus 493 iw~~-~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~-~--~~~~~~~h~----~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 493 LWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-Q--LLQTLTGHS----SSVWGVAFSPDGQT 563 (577)
T ss_dssp EEET-TSCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-C--EEEEEECCS----SCEEEEEECTTSSC
T ss_pred EEcC-CCCEEEEEeC-CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC-C--EEEEEcCCC----CCEEEEEEcCCCCE
Confidence 9995 6888899998 999999999999999999999999999999643 2 233444554 68999999999999
Q ss_pred EEeecCCcee-eec
Q 010051 393 IEASTNDKLV-TAE 405 (519)
Q Consensus 393 l~~~~~d~~i-~~~ 405 (519)
|++++.|+.+ +|+
T Consensus 564 l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 564 IASASSDKTVKLWN 577 (577)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEeCCCEEEEeC
Confidence 9999998877 664
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=318.88 Aligned_cols=294 Identities=22% Similarity=0.379 Sum_probs=235.4
Q ss_pred eeEEecCCCC-CEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 5 TLQINWHDTK-PVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 5 ~~~~~~~h~~-~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
.+..+.+|.+ .|++++|+|+|++||+|+.|++|+|||+.++...... ....+|...|.+++|+|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~------~~~~~h~~~v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKS------VLSEGHQRTVRKVAWSPCGNYLASAS 80 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEE------EECSSCSSCEEEEEECTTSSEEEEEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeee------eeccccCCcEEEEEECCCCCEEEEEE
Confidence 3455668877 9999999999999999999999999999877532211 113579999999999998
Q ss_pred -CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---eEEEecccccCeEEE
Q 010051 76 -GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS---VLQILDAHFHYVQGV 151 (519)
Q Consensus 76 -~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~ 151 (519)
|+.|+||++.... ...+..+.+|...|.+++|+|++++|++|+.|+.|++||+.++. .+..+.+|...|.++
T Consensus 81 ~D~~v~iw~~~~~~----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 81 FDATTCIWKKNQDD----FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp TTSCEEEEEECCC-----EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred CCCcEEEEEccCCC----eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 5889999987542 24567888999999999999999999999999999999998764 456778999999999
Q ss_pred EEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCC
Q 010051 152 AWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGS 231 (519)
Q Consensus 152 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 231 (519)
+|+|++++|++++.|+.|++||+...... .......|...|.+++|+|+|+
T Consensus 157 ~~~p~~~~l~s~s~d~~i~~w~~~~~~~~-----------------------------~~~~~~~h~~~v~~l~~sp~g~ 207 (345)
T 3fm0_A 157 VWHPSQELLASASYDDTVKLYREEEDDWV-----------------------------CCATLEGHESTVWSLAFDPSGQ 207 (345)
T ss_dssp EECSSSSCEEEEETTSCEEEEEEETTEEE-----------------------------EEEEECCCSSCEEEEEECTTSS
T ss_pred EECCCCCEEEEEeCCCcEEEEEecCCCEE-----------------------------EEEEecCCCCceEEEEECCCCC
Confidence 99999999999999999999998764310 0112235677899999999999
Q ss_pred eEEEecCCcceeeeecccceEEEEeccCCCcc--------------cccCCC-CCCCeEEEEEcCCcccccccCCCCccc
Q 010051 232 FLLVPAGSYKISSMSESINSAYIFSRKDLSRP--------------ALQLPG-ASKPVVAVRFCPLAFNLRESNSAGFFK 296 (519)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~--------------~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~g~~~ 296 (519)
+|++++.+ +.|++|+....... +..+.+ |...|.+++|+|++
T Consensus 208 ~l~s~s~D----------~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~------------- 264 (345)
T 3fm0_A 208 RLASCSDD----------RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT------------- 264 (345)
T ss_dssp EEEEEETT----------SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT-------------
T ss_pred EEEEEeCC----------CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC-------------
Confidence 99998887 68999986432211 112223 78899999999988
Q ss_pred ccceEEEEEecCCeEEEEeCCCCC----ce----EE-EeccccccEEEEEEcCCC-CEEEEEeCCCcEEEEEecCCcc
Q 010051 297 LPYRLIFAIATLNSLYIYDTESVP----PI----AI-LAGLHYAAITDIAWSNNA-RYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 297 ~~~~~~~~~~~d~~i~vwd~~~~~----~~----~~-~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
..+++++.|+.|++|+...+. +. .. ..+ |...|++++|+|++ .+||+|+.||+|++|++..++.
T Consensus 265 ---~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 265 ---GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQA-HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp ---CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTS-SSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred ---CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccc-ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 567888899999999987542 11 11 234 89999999999998 5999999999999999987653
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1e-41 Score=310.76 Aligned_cols=295 Identities=16% Similarity=0.201 Sum_probs=240.9
Q ss_pred EEecCCCCCEEEEEEecCC-CEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 7 QINWHDTKPVLTLDFHPIS-GLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~-~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
..+.+|.+.|++++|+|++ ++|++|+.|++|++|++.......
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~------------------------------------ 54 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF------------------------------------ 54 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE------------------------------------
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc------------------------------------
Confidence 3457899999999999976 799999999999999986432110
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 165 (519)
+ ..+..+.+|...|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.
T Consensus 55 -~------~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 127 (319)
T 3frx_A 55 -G------VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR 127 (319)
T ss_dssp -E------EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred -c------ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC
Confidence 0 245566789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC------CCeEEEecCC
Q 010051 166 DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD------GSFLLVPAGS 239 (519)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~------g~~l~~~~~~ 239 (519)
|++|++||++... +.....+...+.++.|+|. +..+++++.+
T Consensus 128 D~~i~vwd~~~~~--------------------------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 175 (319)
T 3frx_A 128 DKTIKVWTIKGQC--------------------------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGND 175 (319)
T ss_dssp TSCEEEEETTSCE--------------------------------EEEECCCSSCEEEEEECCC------CCEEEEEETT
T ss_pred CCeEEEEECCCCe--------------------------------EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCC
Confidence 9999999986431 1112245677889999985 4478887776
Q ss_pred cceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCC
Q 010051 240 YKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV 319 (519)
Q Consensus 240 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~ 319 (519)
+.+++||+... .....+.+|...|.+++|+|++ +++++++.|+.|++||+.++
T Consensus 176 ----------~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~g----------------~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 176 ----------KMVKAWNLNQF-QIEADFIGHNSNINTLTASPDG----------------TLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp ----------SCEEEEETTTT-EEEEEECCCCSCEEEEEECTTS----------------SEEEEEETTCEEEEEETTTT
T ss_pred ----------CEEEEEECCcc-hhheeecCCCCcEEEEEEcCCC----------------CEEEEEeCCCeEEEEECCCC
Confidence 69999999754 4456678899999999999998 66889999999999999999
Q ss_pred CceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeee--cCCcccccCCCCcccccCCccEEEeec
Q 010051 320 PPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISL--SGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 320 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
+.+..+.. ...|.+++|+|++.+|++++. +.+++|+++.......+.. .+........+.+++|+|||.+|++++
T Consensus 229 ~~~~~~~~--~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 229 KAMYTLSA--QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EEEEEEEC--CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred cEEEEecC--CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 99888875 468999999999999998875 5599999987644332221 111223345678899999999999999
Q ss_pred CCcee-eecC
Q 010051 398 NDKLV-TAET 406 (519)
Q Consensus 398 ~d~~i-~~~~ 406 (519)
.|+.| +|+.
T Consensus 306 ~Dg~i~vWd~ 315 (319)
T 3frx_A 306 TDNVIRVWQV 315 (319)
T ss_dssp TTSCEEEEEE
T ss_pred cCceEEEEEE
Confidence 99877 6653
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.9e-41 Score=311.46 Aligned_cols=300 Identities=17% Similarity=0.194 Sum_probs=237.9
Q ss_pred eeEEecCCCCCEEEEEE-----ec-CCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCe
Q 010051 5 TLQINWHDTKPVLTLDF-----HP-ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGE 78 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~-----sp-~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 78 (519)
....+.+|.+.|++++| ++ ++++||+|+.|++|+|||+..++.....
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~--------------------------- 65 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYF--------------------------- 65 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBS---------------------------
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccccc---------------------------
Confidence 35567899999999999 77 8999999999999999999765421100
Q ss_pred EEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCC
Q 010051 79 LIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSK 158 (519)
Q Consensus 79 i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 158 (519)
......+.+|...|.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|+++
T Consensus 66 --------------~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~ 131 (343)
T 2xzm_R 66 --------------GIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR 131 (343)
T ss_dssp --------------EEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT
T ss_pred --------------ccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC
Confidence 023455678999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCC--------
Q 010051 159 YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDG-------- 230 (519)
Q Consensus 159 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-------- 230 (519)
+|++++.|+.|++||+...... .......+...|.+++|+|++
T Consensus 132 ~l~s~~~d~~i~~wd~~~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 182 (343)
T 2xzm_R 132 QILSAGAEREIKLWNILGECKF-----------------------------SSAEKENHSDWVSCVRYSPIMKSANKVQP 182 (343)
T ss_dssp EEEEEETTSCEEEEESSSCEEE-----------------------------ECCTTTSCSSCEEEEEECCCCCSCSCCCS
T ss_pred EEEEEcCCCEEEEEeccCCcee-----------------------------eeecccCCCceeeeeeeccccccccccCC
Confidence 9999999999999998632100 001112455678899999987
Q ss_pred --CeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecC
Q 010051 231 --SFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL 308 (519)
Q Consensus 231 --~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d 308 (519)
.++++++.+ +.|++||.. ......+.+|...|.+++|+|+| ++|++++.|
T Consensus 183 ~~~~l~s~~~d----------~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g----------------~~l~sgs~d 234 (343)
T 2xzm_R 183 FAPYFASVGWD----------GRLKVWNTN--FQIRYTFKAHESNVNHLSISPNG----------------KYIATGGKD 234 (343)
T ss_dssp SCCEEEEEETT----------SEEEEEETT--TEEEEEEECCSSCEEEEEECTTS----------------SEEEEEETT
T ss_pred CCCEEEEEcCC----------CEEEEEcCC--CceeEEEcCccccceEEEECCCC----------------CEEEEEcCC
Confidence 678887776 799999943 34455677899999999999998 668889999
Q ss_pred CeEEEEeCCC-CCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCc-------ccccCC
Q 010051 309 NSLYIYDTES-VPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNK-------VSKDEN 380 (519)
Q Consensus 309 ~~i~vwd~~~-~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-------~~~~~~ 380 (519)
+.|++||+.. ......+. +...|++++|+|++++|+++ .|+.|++|++.+........+.... ..+...
T Consensus 235 g~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (343)
T 2xzm_R 235 KKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ 311 (343)
T ss_dssp CEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCC
T ss_pred CeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCc
Confidence 9999999954 44444443 45679999999999888755 5888999999877544322222111 123456
Q ss_pred CCcccccCCccEEEeecCCcee-eec
Q 010051 381 KSPLVTKSEDMIIEASTNDKLV-TAE 405 (519)
Q Consensus 381 ~~~~~~s~~~~~l~~~~~d~~i-~~~ 405 (519)
+.+++|+|+|.+|++++.|+.| +|+
T Consensus 312 v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 312 CTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp EEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred eEEEEECCCCCeEEEecCCceEEEEE
Confidence 8899999999999999999888 554
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.2e-42 Score=323.32 Aligned_cols=291 Identities=20% Similarity=0.272 Sum_probs=240.3
Q ss_pred eeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------
Q 010051 5 TLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC--------- 75 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------- 75 (519)
..+.+.+|.+.|++++|+|++++||+|+.|++|+|||+.+++.... +..|...|.+++|+|+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~---------~~~h~~~v~~~~~s~~g~~las~~~ 128 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHA---------IKLHCPWVMECAFAPNGQSVACGGL 128 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE---------EECCCTTCCCCEECTTSSEEEECCS
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceE---------EecCCCCEEEEEECCCCCEEEEeeC
Confidence 4466789999999999999999999999999999999988875543 5568888999999988
Q ss_pred CCeEEEEEcccCCCc-ccceeeeccccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceEEEe-----cccccCe
Q 010051 76 GGELIIWKLHTTETG-QAWKVLKNLSFHRKDVLDLQWSTDG-AFLLSGSVDNSCIIWDVNKGSVLQIL-----DAHFHYV 148 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~-----~~h~~~v 148 (519)
|+.+++|++...... ........+.+|...|.++.|+|++ ..|++|+.|++|++||+.+++.+..+ .+|...|
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 478899999764321 1123455678899999999999974 57999999999999999999988777 6789999
Q ss_pred EEEEEcC-CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 149 QGVAWDP-LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 149 ~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
.++.|++ ++++|++++.||.|++||++..... +.....|...|.+++|+
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~------------------------------~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRA------------------------------VRTYHGHEGDINSVKFF 258 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCC------------------------------CEEECCCSSCCCEEEEC
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcc------------------------------eEEECCcCCCeEEEEEe
Confidence 9999986 7899999999999999999743210 11223466789999999
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCC-------CCCCCeEEEEEcCCcccccccCCCCcccccce
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLP-------GASKPVVAVRFCPLAFNLRESNSAGFFKLPYR 300 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~ 300 (519)
|++.+|++++.+ +.+++||++.... ...+. .+...|++++|+|+| +
T Consensus 259 p~~~~l~s~s~D----------~~i~lwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g----------------~ 311 (380)
T 3iz6_a 259 PDGQRFGTGSDD----------GTCRLFDMRTGHQ-LQVYNREPDRNDNELPIVTSVAFSISG----------------R 311 (380)
T ss_dssp TTSSEEEEECSS----------SCEEEEETTTTEE-EEEECCCCSSSCCSSCSCSEEEECSSS----------------S
T ss_pred cCCCeEEEEcCC----------CeEEEEECCCCcE-EEEecccccccccccCceEEEEECCCC----------------C
Confidence 999999999887 6999999976432 22222 223358999999998 6
Q ss_pred EEEEEecCCeEEEEeCCCCCceEEE----eccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 301 LIFAIATLNSLYIYDTESVPPIAIL----AGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 301 ~~~~~~~d~~i~vwd~~~~~~~~~~----~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
++++|+.||.|++||+..++.+..+ .+ |...|++++|+|+|++|++|+.||+|++|++...
T Consensus 312 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 312 LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNS-HEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCSCSS-CCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred EEEEEECCCCEEEEECCCCceEEEEecccCC-CCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 6788888899999999999888777 45 9999999999999999999999999999998764
No 16
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-40 Score=359.38 Aligned_cols=419 Identities=16% Similarity=0.164 Sum_probs=321.0
Q ss_pred eEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------C
Q 010051 6 LQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------G 76 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~ 76 (519)
...+.+|.+.|++++|+|+|++||+|+.||.|+|||+.+++.... +.+|...|.+++|+|+ +
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~---------~~~h~~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD---------IKAHEDEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---------ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE---------eccCCCCEEEEEEecCCCEEEEEeCC
Confidence 345678999999999999999999999999999999999875543 5679999999999998 4
Q ss_pred CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEc
Q 010051 77 GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST--DGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWD 154 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 154 (519)
+.|+|||+.++ +.+..+.+|...|.+++|+| ++.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 679 ~~v~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~s 752 (1249)
T 3sfz_A 679 KKVKIWDSATG------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFS 752 (1249)
T ss_dssp SEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEEC
T ss_pred CeEEEEECCCC------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEe
Confidence 88999999887 67788889999999999999 55689999999999999999999999999999999999999
Q ss_pred CCCCeEEEeeCCCeEEEEecCCCCccccccccc---------------eeeEEEeccCcccccCCccccceee-------
Q 010051 155 PLSKYVASLSSDRTCRIYANRPTKSKGVEKMNY---------------VCQHVITKAGQHSTDDSKSAKNHLF------- 212 (519)
Q Consensus 155 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~------- 212 (519)
|++++|++++.||.|++||+..++......... .....+.+.+....... .....++
T Consensus 753 p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~ 831 (1249)
T 3sfz_A 753 PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGL 831 (1249)
T ss_dssp SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCE
T ss_pred cCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCc
Confidence 999999999999999999998764322111000 00000111111111110 1111111
Q ss_pred ---ecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCccccccc
Q 010051 213 ---HDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRES 289 (519)
Q Consensus 213 ---~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 289 (519)
....+...+.+++|+|++.++++++.+ +.+++|+.... .....+.+|...|.+++|+|++..++++
T Consensus 832 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----------g~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~s~ 900 (1249)
T 3sfz_A 832 LAEIHTGHHSTIQYCDFSPYDHLAVIALSQ----------YCVELWNIDSR-LKVADCRGHLSWVHGVMFSPDGSSFLTA 900 (1249)
T ss_dssp EEEEECSSSSCCCEEEECSSTTEEEEECSS----------SCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred eeEEcCCCCCceEEEEEcCCCCEEEEEeCC----------CeEEEEEcCCC-ceeeecCCCccceEEEEECCCCCEEEEE
Confidence 123567889999999999999998877 68999999754 5567788999999999999999999999
Q ss_pred CCCCcccccc---------------------------------------------------------------eEEEEEe
Q 010051 290 NSAGFFKLPY---------------------------------------------------------------RLIFAIA 306 (519)
Q Consensus 290 ~~~g~~~~~~---------------------------------------------------------------~~~~~~~ 306 (519)
+.++.+.+|. +++++++
T Consensus 901 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~ 980 (1249)
T 3sfz_A 901 SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGD 980 (1249)
T ss_dssp ETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEE
T ss_pred eCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEc
Confidence 9888765432 4688899
Q ss_pred cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccc
Q 010051 307 TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVT 386 (519)
Q Consensus 307 ~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
.+|.|++|++.+++....+.+ |...|++++|+|+|++|++++.||.|++|++.+++.. ...+ +...+.++.|
T Consensus 981 ~~g~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~---~~~~----~~~~v~~~~~ 1052 (1249)
T 3sfz_A 981 EDGAIKIIELPNNRVFSSGVG-HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV---FLQA----HQETVKDFRL 1052 (1249)
T ss_dssp TTSCCEEEETTTTSCEEECCC-CSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE---CCBC----CSSCEEEEEE
T ss_pred CCCCEEEEEcCCCceeeeccc-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE---EEec----CCCcEEEEEE
Confidence 999999999999999999888 9999999999999999999999999999999887543 2222 2467888999
Q ss_pred cCCccEEEeecCCceeeecCCCCCcc----------ccccccCCCceEEeccccceeeeeccccc--------ccccccc
Q 010051 387 KSEDMIIEASTNDKLVTAETKEPDKR----------KTEAETKDDETAINGSIAAESRLIEPERN--------EAESRKA 448 (519)
Q Consensus 387 s~~~~~l~~~~~d~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 448 (519)
++++.+++.+.++...+|+....... ......++...++.++.++..++|+.... +......
T Consensus 1053 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~ 1132 (1249)
T 3sfz_A 1053 LQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRC 1132 (1249)
T ss_dssp CSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEE
T ss_pred cCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEE
Confidence 99877666555555558876543221 11122345556777888888888865432 2222333
Q ss_pred ceeccCCceec
Q 010051 449 EAETEDGKRTT 459 (519)
Q Consensus 449 ~~~~~~~~~~~ 459 (519)
..+.+++...+
T Consensus 1133 ~~~s~dg~~la 1143 (1249)
T 3sfz_A 1133 SAFSLDGILLA 1143 (1249)
T ss_dssp EEECSSSSEEE
T ss_pred EEECCCCCEEE
Confidence 44556665544
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.9e-40 Score=302.29 Aligned_cols=281 Identities=24% Similarity=0.327 Sum_probs=238.1
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CC
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GG 77 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~ 77 (519)
..+.+|.+.|++++|+|++++||+|+.||.|+||++.+++... .+.+|...|.+++|+|+ ++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~---------~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK---------TISGHKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE---------EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch---------hhccCCCceEEEEEcCCCCEEEEECCCC
Confidence 4457899999999999999999999999999999998877543 35679999999999997 58
Q ss_pred eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCC
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLS 157 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 157 (519)
.|++||+.++ +.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|...|.+++|+|++
T Consensus 88 ~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 88 TLKIWDVSSG------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 161 (312)
T ss_dssp EEEEEETTTC------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEECCCC------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC
Confidence 9999999877 5777888899999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
++|++++.||.|++||+++++.... ....+...+..++|+|+++++++++
T Consensus 162 ~~l~~~~~d~~i~~wd~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTASGQCLKT------------------------------LIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEE------------------------------ECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCceeeE------------------------------EeccCCCceEEEEECCCCCEEEEEc
Confidence 9999999999999999987642110 0112345678899999999999988
Q ss_pred CCcceeeeecccceEEEEeccCCCcccccCCCCCCCeE--EEEEc-CCcccccccCCCCcccccceEEEEEecCCeEEEE
Q 010051 238 GSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVV--AVRFC-PLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIY 314 (519)
Q Consensus 238 ~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~--~~~~s-p~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vw 314 (519)
.+ +.+++||+... .....+.+|..... ...++ +++ .++++++.||.|++|
T Consensus 212 ~d----------~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~l~sg~~dg~i~vw 264 (312)
T 4ery_A 212 LD----------NTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGG----------------KWIVSGSEDNLVYIW 264 (312)
T ss_dssp TT----------TEEEEEETTTT-EEEEEECSSCCSSSCCCEEEECSSS----------------CEEEECCTTSCEEEE
T ss_pred CC----------CeEEEEECCCC-cEEEEEEecCCceEEEEEEEEeCCC----------------cEEEEECCCCEEEEE
Confidence 77 69999999754 34445555554332 22333 333 568889999999999
Q ss_pred eCCCCCceEEEeccccccEEEEEEcCCCCEEEEEe--CCCcEEEEEec
Q 010051 315 DTESVPPIAILAGLHYAAITDIAWSNNARYLALSS--QDGYCTLVEFE 360 (519)
Q Consensus 315 d~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--~dg~i~vwd~~ 360 (519)
|+.+++.+..+.+ |...|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 265 d~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 265 NLQTKEIVQKLQG-HTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ETTTCCEEEEECC-CSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ECCCchhhhhhhc-cCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999998 999999999999999999987 69999999864
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-41 Score=305.98 Aligned_cols=300 Identities=19% Similarity=0.280 Sum_probs=228.5
Q ss_pred CeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEE
Q 010051 4 GTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWK 83 (519)
Q Consensus 4 ~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~ 83 (519)
..++.+.+|.+.|++++|+|+ +||+|+.|+.|+|||+..+..
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~------------------------------------ 46 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF------------------------------------ 46 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC------------------------------------
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe------------------------------------
Confidence 456677899999999999987 999999999999999875431
Q ss_pred cccCCCcccceeeecc--ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-------CceEEEecccccCeEEEEEc
Q 010051 84 LHTTETGQAWKVLKNL--SFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK-------GSVLQILDAHFHYVQGVAWD 154 (519)
Q Consensus 84 ~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~ 154 (519)
.....+ .+|...|++++|+|++++|++|+.|++|++||+.. .+.+..+.+|...|.+++|+
T Consensus 47 ----------~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s 116 (330)
T 2hes_X 47 ----------TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS 116 (330)
T ss_dssp ----------EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEEC
T ss_pred ----------EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEEC
Confidence 111112 23889999999999999999999999999999853 35667789999999999999
Q ss_pred CCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEE
Q 010051 155 PLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLL 234 (519)
Q Consensus 155 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 234 (519)
|++++|++++.|++|++||++..... ..+ +.....|...|.+++|+|++.+|+
T Consensus 117 p~g~~las~s~D~~v~iwd~~~~~~~------~~~---------------------~~~~~~h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 117 NDGYYLATCSRDKSVWIWETDESGEE------YEC---------------------ISVLQEHSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp TTSCEEEEEETTSCEEEEECCTTCCC------CEE---------------------EEEECCCSSCEEEEEECSSSSEEE
T ss_pred CCCCEEEEEeCCCEEEEEeccCCCCC------eEE---------------------EEEeccCCCceEEEEECCCCCEEE
Confidence 99999999999999999999543210 000 112234667899999999999999
Q ss_pred EecCCcceeeeecccceEEEEeccCCC-cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEE
Q 010051 235 VPAGSYKISSMSESINSAYIFSRKDLS-RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYI 313 (519)
Q Consensus 235 ~~~~~~~~~~~~~~~~~i~i~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~v 313 (519)
+++.+ +.|++|+..... .++..+.+|...|.+++|+|++.. .++++++.|++|++
T Consensus 170 s~s~D----------~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--------------~~l~s~s~D~~v~i 225 (330)
T 2hes_X 170 SSSYD----------DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGV--------------FRLCSGSDDSTVRV 225 (330)
T ss_dssp EEETT----------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSS--------------CEEEEEETTSCEEE
T ss_pred EEcCC----------CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCe--------------eEEEEEeCCCeEEE
Confidence 98887 699999986532 456778899999999999998421 46889999999999
Q ss_pred EeCCCC--------CceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceee-ecCCcccccCCCCcc
Q 010051 314 YDTESV--------PPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPIS-LSGNKVSKDENKSPL 384 (519)
Q Consensus 314 wd~~~~--------~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~ 384 (519)
||+..+ .....+...|...|++++|++++ +|++++.||.|++|++.+++...... ..+|. ...+.++
T Consensus 226 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~---~~~v~~v 301 (330)
T 2hes_X 226 WKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHG---VYEINVV 301 (330)
T ss_dssp EEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTT---TSCEEEE
T ss_pred EEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccc---cceEEEE
Confidence 998754 23344444488999999999765 89999999999999998764322211 12332 1278899
Q ss_pred cccC--CccEEEeecCCcee-eecC
Q 010051 385 VTKS--EDMIIEASTNDKLV-TAET 406 (519)
Q Consensus 385 ~~s~--~~~~l~~~~~d~~i-~~~~ 406 (519)
+|+| ++.+|++++.|+.+ +|+.
T Consensus 302 ~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 302 KWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EEC-----CCEEEEETTSEEEEEEC
T ss_pred EEecCCCceEEEEecCCCcEEEEEe
Confidence 9999 78999999999887 6654
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.2e-41 Score=317.71 Aligned_cols=294 Identities=16% Similarity=0.245 Sum_probs=249.2
Q ss_pred cccccccCcceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 010051 57 QNSLSYHGSAINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSC 127 (519)
Q Consensus 57 ~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 127 (519)
...+.+|...|++++|+|+ |+.|+|||+.++ +....+.+|...|++++|+|++++|++|+.|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~------~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG------DFERTLKGHTDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC------CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 4457789999999999997 589999999887 5677888999999999999999999999999999
Q ss_pred EEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccc
Q 010051 128 IIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSA 207 (519)
Q Consensus 128 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (519)
++||+.+++++..+.+|...|.+++|+|++++|++++.|++|++||++++... .
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~----------~---------------- 228 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV----------K---------------- 228 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE----------E----------------
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE----------E----------------
Confidence 99999999999999999999999999999999999999999999999876421 1
Q ss_pred cceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCccccc
Q 010051 208 KNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLR 287 (519)
Q Consensus 208 ~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 287 (519)
....+...|.++.|+|+|.++++++.+ +.+++||+... .....+.+|...|.+++|+|++.+..
T Consensus 229 -----~~~~h~~~v~~~~~~~~g~~l~s~s~D----------~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 229 -----TFTGHREWVRMVRPNQDGTLIASCSND----------QTVRVWVVATK-ECKAELREHRHVVECISWAPESSYSS 292 (410)
T ss_dssp -----EEECCSSCEEEEEECTTSSEEEEEETT----------SCEEEEETTTC-CEEEEECCCSSCEEEEEECCSCGGGG
T ss_pred -----EEeCCCccEEEEEECCCCCEEEEEcCC----------CeEEEEECCCC-ceeeEecCCCceEEEEEEcCcccccc
Confidence 112355678899999999999998887 69999999754 45567788999999999999876543
Q ss_pred ccCCCCc----ccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCc
Q 010051 288 ESNSAGF----FKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDE 363 (519)
Q Consensus 288 ~~~~~g~----~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~ 363 (519)
.....+. ......++++++.|+.|++||+.++.++..+.+ |...|++++|+|+|++|++++.||.|++||+.+++
T Consensus 293 ~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp GGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred hhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 3222110 001236899999999999999999999999998 99999999999999999999999999999998775
Q ss_pred ccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eec
Q 010051 364 LGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAE 405 (519)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~ 405 (519)
.... +.+| ...|.+++|+|++.+|++++.|+.+ +|+
T Consensus 372 ~~~~--~~~h----~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 372 CMKT--LNAH----EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp CCEE--EECC----SSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred eEEE--EcCC----CCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 4433 3344 3578999999999999999999888 665
No 20
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-42 Score=326.32 Aligned_cols=338 Identities=17% Similarity=0.239 Sum_probs=264.3
Q ss_pred CCCCCEEEEEEecCCC-EEEEE----------cCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC----
Q 010051 11 HDTKPVLTLDFHPISG-LLATG----------GADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---- 75 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~-~la~~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---- 75 (519)
.+...|.+++|+|+++ +||+| +.|+.|+|||+.++.....+ ....|...|.+++|+|+
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~l 82 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPI-------ASLQVDSKFNDLDWSHNNKII 82 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCS-------CCCCCSSCEEEEEECSSSSCE
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEE-------EEEecCCceEEEEECCCCCeE
Confidence 3456799999999997 99999 88999999999987643211 12247889999999987
Q ss_pred -----CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCc------eEE---E
Q 010051 76 -----GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTD-GAFLLSGSVDNSCIIWDVNKGS------VLQ---I 140 (519)
Q Consensus 76 -----~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~------~~~---~ 140 (519)
++.|++|++....... ..+..+.+|...|++++|+|+ +.+|++++.|+.|++||+.+++ ... .
T Consensus 83 ~~~~~dg~v~vw~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 83 AGALDNGSLELYSTNEANNAI--NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp EEEESSSCEEEECCSSTTSCC--CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred EEEccCCeEEEeecccccccc--cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc
Confidence 5899999998732211 367778889999999999998 8999999999999999999886 332 3
Q ss_pred ecccccCeEEEEEcCC-CCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcc
Q 010051 141 LDAHFHYVQGVAWDPL-SKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPS 219 (519)
Q Consensus 141 ~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (519)
+..|...|.+++|+|+ +.+|++++.||.|++||++..+....... . .....+..
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~----------~---------------~~~~~~~~ 215 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSY----------T---------------SPNSGIKQ 215 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECC----------C---------------CCSSCCCC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEec----------c---------------ccccccCC
Confidence 3678899999999998 78999999999999999987642111000 0 00012257
Q ss_pred eeeEEEEccCC-CeEEEecCCcceeeeecccceEEEEeccCCCcccccCC-CCCCCeEEEEEcC-CcccccccCCCCccc
Q 010051 220 FFRRLAWSPDG-SFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLP-GASKPVVAVRFCP-LAFNLRESNSAGFFK 296 (519)
Q Consensus 220 ~i~~~~~sp~g-~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~~g~~~ 296 (519)
.+.+++|+|++ .++++++.++ ..+.+++||++....+...+. +|...|.+++|+| ++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~-------~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~------------- 275 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSD-------NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE------------- 275 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCS-------SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-------------
T ss_pred ceEEEEECCCCCCEEEEEECCC-------CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-------------
Confidence 79999999998 5677766551 012899999987767777787 8999999999999 66
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCC-CEEEEEeCCCcEEEEEecCCcccceeee-----
Q 010051 297 LPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNA-RYLALSSQDGYCTLVEFENDELGIPISL----- 370 (519)
Q Consensus 297 ~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~~~~~~~~~----- 370 (519)
+++++++.|+.|++||+.+++.+..+.. |...|++++|+|++ .+|++++.||.|++|++...........
T Consensus 276 ---~~l~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 351 (416)
T 2pm9_A 276 ---HLLLSSGRDNTVLLWNPESAEQLSQFPA-RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQ 351 (416)
T ss_dssp ---SCEEEEESSSEEEEECSSSCCEEEEEEC-SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------
T ss_pred ---CeEEEEeCCCCEEEeeCCCCccceeecC-CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccc
Confidence 5688889999999999999999999998 99999999999999 8999999999999999987653221100
Q ss_pred ---------c---------------CCcccccCCCCcccccCCccEEEeecCCcee-eecC
Q 010051 371 ---------S---------------GNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAET 406 (519)
Q Consensus 371 ---------~---------------~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~ 406 (519)
. .........+..++|+|+|++|++++.|+.| +|+.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 352 QESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp ---------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred cCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 0 0001134567789999999999999988876 5543
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-40 Score=313.03 Aligned_cols=295 Identities=21% Similarity=0.269 Sum_probs=238.1
Q ss_pred ecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCcccccccccccc---------ccccccCcceeEEEEccC----
Q 010051 9 NWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQ---------NSLSYHGSAINILRFSPC---- 75 (519)
Q Consensus 9 ~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~~~---- 75 (519)
..+|...|++++|||||++||+|+ ++.++||++.+++.+..+...... .....+...|.+++|+|+
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred ecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 347999999999999999999987 688999999998876554321100 001123345899999998
Q ss_pred -----CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEE
Q 010051 76 -----GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQG 150 (519)
Q Consensus 76 -----~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 150 (519)
|+.|+|||+.++ +.+..+.+|...|++++|+|++++|++++.|++|++||+++++....+. +...+.+
T Consensus 139 ~s~~~d~~i~iwd~~~~------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~ 211 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENR------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTT 211 (393)
T ss_dssp EEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEE
T ss_pred EEEcCCCeEEEEECCCC------cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEE
Confidence 588999999877 6778888999999999999999999999999999999999998877776 4578999
Q ss_pred EEEcC-CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 151 VAWDP-LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 151 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
++|+| ++++|++++.||.|++||++++........ .......|...|.+++|+|+
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~------------------------~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS------------------------ENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------------------------CCCSSCEEEEEECTT
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc------------------------cccCCCCCCCCEEEEEECCC
Confidence 99999 899999999999999999987642110000 00011246678999999999
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCC-----------cccccCCCCCCCeEEEEEcCCcccccccCCCCccccc
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLS-----------RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLP 298 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~-----------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~ 298 (519)
|++|++++.+ +.|++||+.... .+...+.+|...|.+++|+|++
T Consensus 268 g~~l~s~s~d----------~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--------------- 322 (393)
T 1erj_A 268 GQSVVSGSLD----------RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND--------------- 322 (393)
T ss_dssp SSEEEEEETT----------SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG---------------
T ss_pred CCEEEEEeCC----------CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC---------------
Confidence 9999998877 699999986532 2234566899999999999988
Q ss_pred ceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcC------CCCEEEEEeCCCcEEEEEecCC
Q 010051 299 YRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSN------NARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 299 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~------~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
.++++++.|+.|++||+.+++++..+.+ |...|.+++|++ ++++|++|+.||+|+||++...
T Consensus 323 -~~l~sgs~D~~v~iwd~~~~~~~~~l~~-h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 323 -EYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp -CEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred -CEEEEEeCCCeEEEEECCCCeEEEEECC-CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 6688999999999999999999999999 999999999986 6889999999999999998653
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.6e-41 Score=304.75 Aligned_cols=277 Identities=19% Similarity=0.269 Sum_probs=237.7
Q ss_pred ccccCcceeEEEEccC-------------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCe
Q 010051 60 LSYHGSAINILRFSPC-------------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNS 126 (519)
Q Consensus 60 ~~~~~~~v~~~~~~~~-------------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 126 (519)
+.+|.+.|.+++|+|+ |+.|+||++.... ......+.+|...|.+++|++++.++++++.|++
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~----~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER----LDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC----eeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 4569999999999874 6899999997652 1345568899999999999999999999999999
Q ss_pred EEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCcc
Q 010051 127 CIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKS 206 (519)
Q Consensus 127 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (519)
|++||+.+++.+..+..|...+.+++|+|++++|++++.||.|++|++..++..
T Consensus 104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~-------------------------- 157 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE-------------------------- 157 (321)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE--------------------------
T ss_pred EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee--------------------------
Confidence 999999999999999999999999999999999999999999999999876421
Q ss_pred ccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccc
Q 010051 207 AKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNL 286 (519)
Q Consensus 207 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 286 (519)
.....+...+.+++|+|+|++|++++.+ +.|++||+... ..+..+.+|..+|.+++|+|++
T Consensus 158 -----~~~~~~~~~v~~~~~spdg~~lasg~~d----------g~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spd~--- 218 (321)
T 3ow8_A 158 -----YSLDTRGKFILSIAYSPDGKYLASGAID----------GIINIFDIATG-KLLHTLEGHAMPIRSLTFSPDS--- 218 (321)
T ss_dssp -----EEEECSSSCEEEEEECTTSSEEEEEETT----------SCEEEEETTTT-EEEEEECCCSSCCCEEEECTTS---
T ss_pred -----EEecCCCceEEEEEECCCCCEEEEEcCC----------CeEEEEECCCC-cEEEEEcccCCceeEEEEcCCC---
Confidence 1112334568899999999999998877 68999999754 5566788999999999999998
Q ss_pred cccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccc
Q 010051 287 RESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGI 366 (519)
Q Consensus 287 ~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~ 366 (519)
+++++++.|+.|++||+.++..+..+.+ |...|++++|+|++++|++++.|++|++||+.+++...
T Consensus 219 -------------~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 219 -------------QLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp -------------CEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred -------------CEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 5688888899999999999999999998 99999999999999999999999999999998875433
Q ss_pred eeeecCCcccccCCCCcccccCCccEEEeecCCcee-eec
Q 010051 367 PISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAE 405 (519)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~ 405 (519)
.+.+| ...+.+++|+|++.+|++++.|+.+ +|+
T Consensus 285 --~~~~h----~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 285 --TFFDH----QDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp --EECCC----SSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred --EEcCC----CCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 33344 3678999999999999999998877 665
No 23
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.5e-40 Score=356.87 Aligned_cols=374 Identities=15% Similarity=0.161 Sum_probs=295.9
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC------- 75 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------- 75 (519)
+..+..+.+|.+.|++++|+|++++||+|+.|+.|+|||+.+++.+.. +.+|...|.+++|+|+
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~~~l~ 717 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHT---------YDEHSEQVNCCHFTNKSNHLLLA 717 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---------EECCSSCEEEEEECSSSSCCEEE
T ss_pred CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEE---------EcCCCCcEEEEEEecCCCceEEE
Confidence 455667778999999999999999999999999999999999876543 5568999999999884
Q ss_pred ----CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEe----------
Q 010051 76 ----GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQIL---------- 141 (519)
Q Consensus 76 ----~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---------- 141 (519)
++.|++||+.++ .....+.+|...|++++|+|++++|++++.||.|++||+.+++....+
T Consensus 718 sg~~d~~v~vwd~~~~------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 791 (1249)
T 3sfz_A 718 TGSNDFFLKLWDLNQK------ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSE 791 (1249)
T ss_dssp EEETTSCEEEEETTSS------SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC----
T ss_pred EEeCCCeEEEEECCCc------chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccC
Confidence 588999999887 577788899999999999999999999999999999999876544332
Q ss_pred ---------------------------------------------cccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCC
Q 010051 142 ---------------------------------------------DAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRP 176 (519)
Q Consensus 142 ---------------------------------------------~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 176 (519)
.+|...|.+++|+|+++++++++.||.|++||+.+
T Consensus 792 ~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 792 DPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp ----CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTT
T ss_pred CccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCC
Confidence 15667788888888888888888888888888877
Q ss_pred CCccccccc--cceeeEEEeccCcccccCCccccceeeecC---------------------------------------
Q 010051 177 TKSKGVEKM--NYVCQHVITKAGQHSTDDSKSAKNHLFHDE--------------------------------------- 215 (519)
Q Consensus 177 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 215 (519)
+........ .......+.+.+.............+|...
T Consensus 872 ~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1249)
T 3sfz_A 872 RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAG 951 (1249)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEE
T ss_pred CceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEec
Confidence 643322111 111222333334344444444444444311
Q ss_pred -------CCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccc
Q 010051 216 -------TLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRE 288 (519)
Q Consensus 216 -------~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 288 (519)
.....+.+++|+|+++++++++.+ +.+++|+.... .....+.+|...|.+++|+|++.++++
T Consensus 952 ~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~----------g~i~i~d~~~~-~~~~~~~~h~~~v~~l~~s~dg~~l~s 1020 (1249)
T 3sfz_A 952 KTGQIDYLPEAQVSCCCLSPHLEYVAFGDED----------GAIKIIELPNN-RVFSSGVGHKKAVRHIQFTADGKTLIS 1020 (1249)
T ss_dssp SSCCEEEECCSCEEEEEECTTSSEEEEEETT----------SCCEEEETTTT-SCEEECCCCSSCCCCEEECSSSSCEEE
T ss_pred CcceEEEcccCcEEEEEEcCCCCEEEEEcCC----------CCEEEEEcCCC-ceeeecccCCCceEEEEECCCCCEEEE
Confidence 012357778888888888887766 68999998754 556677899999999999999999999
Q ss_pred cCCCCccccc------------------------ceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCE
Q 010051 289 SNSAGFFKLP------------------------YRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARY 344 (519)
Q Consensus 289 ~~~~g~~~~~------------------------~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 344 (519)
++.+|.+.+| ...+++++.|+.|++||+.+++.+..+.+ |...|++++|+|++++
T Consensus 1021 ~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~~v~~~~~s~d~~~ 1099 (1249)
T 3sfz_A 1021 SSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC-HQGTVLSCAISSDATK 1099 (1249)
T ss_dssp ECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEEC-CSSCCCCEEECSSSSS
T ss_pred EcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcc-cCCcEEEEEECCCCCE
Confidence 9998876543 25688999999999999999999999998 9999999999999999
Q ss_pred EEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCCC
Q 010051 345 LALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKEP 409 (519)
Q Consensus 345 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~~ 409 (519)
|++++.||.|++||+.++..... +.+| ...+.+++|+|+|.+|++++.|+.+ +|+....
T Consensus 1100 l~s~s~d~~v~iwd~~~~~~~~~--l~~h----~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1100 FSSTSADKTAKIWSFDLLSPLHE--LKGH----NGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159 (1249)
T ss_dssp CEEECCSSCCCEECSSSSSCSBC--CCCC----SSCEEEEEECSSSSEEEEEETTSCCCEEESSSS
T ss_pred EEEEcCCCcEEEEECCCcceeee--eccC----CCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 99999999999999988754332 3333 3678999999999999999988877 7876543
No 24
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.2e-41 Score=317.98 Aligned_cols=348 Identities=16% Similarity=0.087 Sum_probs=256.7
Q ss_pred CEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccce
Q 010051 15 PVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWK 94 (519)
Q Consensus 15 ~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~ 94 (519)
.+++++|+|++++|++++.|+.|++||+.+++....+....... +......-..++....++.|++||+..+ +
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~------~ 130 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTA-VDTAKLQMRRFILGTTEGDIKVLDSNFN------L 130 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEE-EEEECSSSCEEEEEETTSCEEEECTTSC------E
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceE-EEEEecCCCEEEEEECCCCEEEEeCCCc------c
Confidence 45589999999999999999999999998887655432211100 0000001112333334689999999876 6
Q ss_pred eeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEec
Q 010051 95 VLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYAN 174 (519)
Q Consensus 95 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 174 (519)
....+.+|...|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 67777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccc-----eeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeeccc
Q 010051 175 RPTKSKGVEKMNY-----VCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESI 249 (519)
Q Consensus 175 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~ 249 (519)
++++......... .....+...... .....+...+.+++|+|+++++++++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------------~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------- 268 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDR------------QLHEISTSKKNNLEFGTYGKYVIAGHVS---------- 268 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCS------------SCGGGCCCCCCTTCSSCTTEEEEEEETT----------
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcc------------eeeecccCcccceEEcCCCCEEEEEcCC----------
Confidence 8875332211100 000000000000 0011124567789999999999998877
Q ss_pred ceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCc-eEEEecc
Q 010051 250 NSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPP-IAILAGL 328 (519)
Q Consensus 250 ~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~-~~~~~~~ 328 (519)
+.+++||+............|...|.+++|+|++. .++++++.||.|++||+.+++. +..+...
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~ 333 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNA---------------NYIYAGYENGMLAQWDLRSPECPVGEFLIN 333 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCT---------------TEEEEEETTSEEEEEETTCTTSCSEEEEES
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCC---------------CEEEEEeCCCeEEEEEcCCCcCchhhhhcc
Confidence 68999999876655556667889999999999983 1688999999999999998754 6777764
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCC---cccccCCCCcccccCCcc----EEEeecCCce
Q 010051 329 HYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGN---KVSKDENKSPLVTKSEDM----IIEASTNDKL 401 (519)
Q Consensus 329 ~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~----~l~~~~~d~~ 401 (519)
|...|+++.| +++++|++++.||.|++|++.............. ...+...+..++|+|++. ++++++.+..
T Consensus 334 ~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~ 412 (420)
T 3vl1_A 334 EGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFC 412 (420)
T ss_dssp TTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEE
T ss_pred CCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceE
Confidence 6778888855 5788999999999999999987533222211111 113457899999999999 5666666655
Q ss_pred eeecCC
Q 010051 402 VTAETK 407 (519)
Q Consensus 402 i~~~~~ 407 (519)
.+|...
T Consensus 413 ~~~~~~ 418 (420)
T 3vl1_A 413 ALYNLS 418 (420)
T ss_dssp EEEESC
T ss_pred EEEecc
Confidence 577654
No 25
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-39 Score=325.04 Aligned_cols=373 Identities=16% Similarity=0.161 Sum_probs=271.8
Q ss_pred CeeEEecCCCCC-EEEEEEec--CCCEEEEEcCCCcEEEEEecCC--------cccccccc-------------------
Q 010051 4 GTLQINWHDTKP-VLTLDFHP--ISGLLATGGADYDIKIWLINSG--------EKQKKIPT------------------- 53 (519)
Q Consensus 4 ~~~~~~~~h~~~-V~~~~~sp--~~~~la~~~~dg~i~iwd~~~~--------~~~~~~~~------------------- 53 (519)
..+..+.+|.+. |++++|+| ++++||+|+.||.|+|||+.++ .....+..
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 467778899999 99999999 9999999999999999999754 22222110
Q ss_pred ----------------ccccccccccCcceeEEEEccCC----------CeEEEEEcccCCCcccceeeeccccCCC---
Q 010051 54 ----------------ASYQNSLSYHGSAINILRFSPCG----------GELIIWKLHTTETGQAWKVLKNLSFHRK--- 104 (519)
Q Consensus 54 ----------------~~~~~~~~~~~~~v~~~~~~~~~----------~~i~vw~~~~~~~~~~~~~~~~~~~~~~--- 104 (519)
......+..|...|.+++|+|++ +.|++||+... +.+..+.+|..
T Consensus 134 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~------~~~~~~~~~~~~~~ 207 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF------KFSASDRTHHKQGS 207 (615)
T ss_dssp EECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB------EEEEEECSSSCTTC
T ss_pred eccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc------ceeeeecccCCCCc
Confidence 01123345677888888888874 78999998776 67778888999
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceEEEe-c---ccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCc
Q 010051 105 DVLDLQWSTD-GAFLLSGSVDNSCIIWDVNKGSVLQIL-D---AHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKS 179 (519)
Q Consensus 105 ~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 179 (519)
.|++++|+|+ +++|++++.||.|++||+.+++.+..+ . .|...|.+++|+ ++++|++++.||.|++||+.+++.
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999999 999999999999999999999999988 6 899999999999 999999999999999999987654
Q ss_pred ccccccc-----ceeeEEEeccCcccccCCccccc--------------------------------------eeeec--
Q 010051 180 KGVEKMN-----YVCQHVITKAGQHSTDDSKSAKN--------------------------------------HLFHD-- 214 (519)
Q Consensus 180 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~-- 214 (519)
....... ..........+............ .++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~ 366 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSS 366 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTE
T ss_pred EEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchh
Confidence 3322211 00000000011111111100000 00000
Q ss_pred --CCCcceeeEEEEccCCCeEEEecCCcceeee-----------------------------------------------
Q 010051 215 --ETLPSFFRRLAWSPDGSFLLVPAGSYKISSM----------------------------------------------- 245 (519)
Q Consensus 215 --~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~----------------------------------------------- 245 (519)
..+...|.+++| +++..+++++.++.+..+
T Consensus 367 ~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (615)
T 1pgu_A 367 MHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 445 (615)
T ss_dssp EECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred hcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeeccc
Confidence 234445555555 334455555444333222
Q ss_pred ----------------ecc-cceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecC
Q 010051 246 ----------------SES-INSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL 308 (519)
Q Consensus 246 ----------------~~~-~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d 308 (519)
... ++.+++|++.........+.+|...|++++|+|++ +++++++.|
T Consensus 446 ~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----------------~~l~~~~~d 509 (615)
T 1pgu_A 446 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE----------------TYIAAGDVM 509 (615)
T ss_dssp SSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS----------------SEEEEEETT
T ss_pred CCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCC----------------CEEEEcCCC
Confidence 122 57788888765322115667888999999999988 668888899
Q ss_pred CeEEEEeCCCCCceEEEeccccccEEEEEEcC----------CCCEEEEEeCCCcEEEEEecCCcccceeeecCCccccc
Q 010051 309 NSLYIYDTESVPPIAILAGLHYAAITDIAWSN----------NARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKD 378 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~----------~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 378 (519)
+.|++||+.+++.+..+.+.|...|++++|+| ++++|++++.||.|++|++.++. .....+.+| .
T Consensus 510 g~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~h----~ 584 (615)
T 1pgu_A 510 GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAH----K 584 (615)
T ss_dssp SCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-CCEEETTSS----T
T ss_pred CeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc-eechhhhcC----c
Confidence 99999999999988887765899999999999 99999999999999999998763 122233444 4
Q ss_pred CCCCcccccCCccEEEeecCCcee-eecC
Q 010051 379 ENKSPLVTKSEDMIIEASTNDKLV-TAET 406 (519)
Q Consensus 379 ~~~~~~~~s~~~~~l~~~~~d~~i-~~~~ 406 (519)
..+.+++|+|++. |++++.|+.+ +|+.
T Consensus 585 ~~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 585 DGVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp TCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred cceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 6899999999999 9999988876 6653
No 26
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-39 Score=335.44 Aligned_cols=408 Identities=13% Similarity=0.100 Sum_probs=277.0
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------CCe
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC--------GGE 78 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~ 78 (519)
...++|.+.|++++|+|++++||+|+.||.|+||+....+.... ..|...|.+++|+|. |+.
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~----------~~~~~~V~~l~fspg~~L~S~s~D~~ 80 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK----------LEDRSAIKEMRFVKGIYLVVINAKDT 80 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE----------CSSCCCEEEEEEETTTEEEEEETTCE
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE----------cCCCCCEEEEEEcCCCEEEEEECcCe
Confidence 34578999999999999999999999999999999876654332 226778899998874 588
Q ss_pred EEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceE-----------EEecccccC
Q 010051 79 LIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVL-----------QILDAHFHY 147 (519)
Q Consensus 79 i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~-----------~~~~~h~~~ 147 (519)
|+|||+.++ +.+..+. |...|++++|+|++++|++|+.||.|++||+.+++.. ..+.+|.+.
T Consensus 81 v~lWd~~~~------~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~ 153 (902)
T 2oaj_A 81 VYVLSLYSQ------KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSP 153 (902)
T ss_dssp EEEEETTTC------SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCC
T ss_pred EEEEECCCC------cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCC
Confidence 999999876 4555554 6688999999999999999999999999999988753 234678889
Q ss_pred eEEEEEcCC-CCeEEEeeCCCeEEEEecCCCCccccccc--------------------cceeeEEEeccCcccccCCcc
Q 010051 148 VQGVAWDPL-SKYVASLSSDRTCRIYANRPTKSKGVEKM--------------------NYVCQHVITKAGQHSTDDSKS 206 (519)
Q Consensus 148 v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 206 (519)
|.+++|+|+ +..|++++.||.| +||+++.+....... .......+.+.+..+.....+
T Consensus 154 V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D 232 (902)
T 2oaj_A 154 IVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED 232 (902)
T ss_dssp CCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC
Confidence 999999996 4688899999999 999987654322111 112223344444444433333
Q ss_pred ccceeeecC---------------------------CCcceeeEEEEc----cCC-CeEEEecCCc-----ceeee----
Q 010051 207 AKNHLFHDE---------------------------TLPSFFRRLAWS----PDG-SFLLVPAGSY-----KISSM---- 245 (519)
Q Consensus 207 ~~~~~~~~~---------------------------~~~~~i~~~~~s----p~g-~~l~~~~~~~-----~~~~~---- 245 (519)
....+|... .+...|.+++|+ |++ ..+++++.+. .+..+
T Consensus 233 g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~ 312 (902)
T 2oaj_A 233 NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGY 312 (902)
T ss_dssp CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCC
Confidence 333333211 123468899995 443 3455543321 11111
Q ss_pred ---------------------------------------------------------ecccceEEEEeccCCCcc-----
Q 010051 246 ---------------------------------------------------------SESINSAYIFSRKDLSRP----- 263 (519)
Q Consensus 246 ---------------------------------------------------------~~~~~~i~i~~~~~~~~~----- 263 (519)
...++.+++|++......
T Consensus 313 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~ 392 (902)
T 2oaj_A 313 TPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASL 392 (902)
T ss_dssp CCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGG
T ss_pred CCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccccc
Confidence 011366888887543211
Q ss_pred -cccCCCCCCCeEEEEEcCCccc--------------ccccCCCCc----ccccceEEEEEecCCeEEEEeCCCCCce--
Q 010051 264 -ALQLPGASKPVVAVRFCPLAFN--------------LRESNSAGF----FKLPYRLIFAIATLNSLYIYDTESVPPI-- 322 (519)
Q Consensus 264 -~~~~~~~~~~v~~~~~sp~~~~--------------l~~~~~~g~----~~~~~~~~~~~~~d~~i~vwd~~~~~~~-- 322 (519)
...+..|...|++++|++.... ...+..... +....+++++++.|++|++||+.++...
T Consensus 393 ~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~ 472 (902)
T 2oaj_A 393 FPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN 472 (902)
T ss_dssp SCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT
T ss_pred CCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC
Confidence 1234556678888888642211 111111100 1113478999999999999999887532
Q ss_pred --EEEe-------ccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccc----------------------------
Q 010051 323 --AILA-------GLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELG---------------------------- 365 (519)
Q Consensus 323 --~~~~-------~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~---------------------------- 365 (519)
..+. + |...|++++|+|+|++||+|+.||+|+||++.+++..
T Consensus 473 ~~~~~~l~~~~~~~-h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (902)
T 2oaj_A 473 ASFEVNLSRTLNKA-KELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV 551 (902)
T ss_dssp BCEEEEHHHHTTCS-SSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred ceEEeechhhcCCC-CCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence 1111 4 8889999999999999999999999999999876320
Q ss_pred ---------------ceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCCCCcc------cc---------
Q 010051 366 ---------------IPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKEPDKR------KT--------- 414 (519)
Q Consensus 366 ---------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~~~~~------~~--------- 414 (519)
....+.+ +...|++++||||| +||+++.|+.| +|+....... .+
T Consensus 552 ~~~~~~~~~~~~g~~~~~~l~~----h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~ 626 (902)
T 2oaj_A 552 DVRDRAPTGVRQGFMPSTAVHA----NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVT 626 (902)
T ss_dssp ECGGGCCTTCSEEEEEEEEECC----CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEE
T ss_pred cccccCCCCCCCccceeEEEEc----CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceE
Confidence 0122223 35789999999999 99999999976 8876543221 01
Q ss_pred c-ccc-----CC---CceEEeccccceeeeecc
Q 010051 415 E-AET-----KD---DETAINGSIAAESRLIEP 438 (519)
Q Consensus 415 ~-~~~-----~~---~~~~~~~~~~~~~~~~~~ 438 (519)
. ... ++ ...+++++.+...++|+.
T Consensus 627 sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 627 CIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 0 111 22 357888999999999986
No 27
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4e-39 Score=332.91 Aligned_cols=382 Identities=15% Similarity=0.163 Sum_probs=295.5
Q ss_pred CCCCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-----
Q 010051 1 MKGGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC----- 75 (519)
Q Consensus 1 ~~~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 75 (519)
|+=...+.+.+|.+.|++++|||++++||+|+.||.|+|||+.+++.... +..|...|.+++|+|+
T Consensus 1 m~l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~---------~~~~~~~v~~~~~s~~~~~l~ 71 (814)
T 3mkq_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRS---------IQVTETPVRAGKFIARKNWII 71 (814)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---------EECCSSCEEEEEEEGGGTEEE
T ss_pred CCcccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE---------EecCCCcEEEEEEeCCCCEEE
Confidence 34456678889999999999999999999999999999999998875543 5568999999999997
Q ss_pred ----CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceEEEecccccCeEE
Q 010051 76 ----GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKG-SVLQILDAHFHYVQG 150 (519)
Q Consensus 76 ----~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~ 150 (519)
++.|++|++.++ +.+..+.+|...|++++|+|++++|++++.||.|++||+.++ .....+.+|...|.+
T Consensus 72 ~~~~dg~i~vw~~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 72 VGSDDFRIRVFNYNTG------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (814)
T ss_dssp EEETTSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEE
T ss_pred EEeCCCeEEEEECCCC------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEE
Confidence 589999999877 677778889999999999999999999999999999999987 677788899999999
Q ss_pred EEEcC-CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-
Q 010051 151 VAWDP-LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP- 228 (519)
Q Consensus 151 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp- 228 (519)
++|+| +++.|++++.||.|++||+........ ....+...+..++|+|
T Consensus 146 ~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~------------------------------~~~~~~~~v~~~~~~~~ 195 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT------------------------------LTTGQERGVNYVDYYPL 195 (814)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEETTCSSCSEE------------------------------EECCCTTCCCEEEECCS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeE------------------------------EecCCCCCEEEEEEEEC
Confidence 99999 889999999999999999976542111 0112336688999999
Q ss_pred -CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec
Q 010051 229 -DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT 307 (519)
Q Consensus 229 -~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~ 307 (519)
++.++++++.+ +.+++||.... .....+.+|...|.+++|+|++ +++++++.
T Consensus 196 ~~~~~l~~~~~d----------g~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~----------------~~l~~~~~ 248 (814)
T 3mkq_A 196 PDKPYMITASDD----------LTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPTL----------------PIIISGSE 248 (814)
T ss_dssp TTCCEEEEECTT----------SEEEEEETTTT-EEEEEEECCSSCEEEEEECSSS----------------SEEEEEET
T ss_pred CCCCEEEEEeCC----------CEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCC----------------CEEEEEeC
Confidence 99999998877 69999998654 4566677899999999999998 56888899
Q ss_pred CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCE-EEEEeCCCcEEEEEecCCcccceeeecCC-------------
Q 010051 308 LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARY-LALSSQDGYCTLVEFENDELGIPISLSGN------------- 373 (519)
Q Consensus 308 d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------------- 373 (519)
||.|++||+.+++.+..+.. |...+.+++|+|+|.. +++++.++.+.+|++........+...+.
T Consensus 249 dg~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 327 (814)
T 3mkq_A 249 DGTLKIWNSSTYKVEKTLNV-GLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASD 327 (814)
T ss_dssp TSCEEEEETTTCSEEEEECC-SSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTC
T ss_pred CCeEEEEECCCCcEEEEeec-CCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECccccccee
Confidence 99999999999999999988 8899999999999973 24455577899998765432111110000
Q ss_pred ------------------------cccccCCCCcccccCCccEEEeecCCceeeecCCCCCcc-----ccccccCCCceE
Q 010051 374 ------------------------KVSKDENKSPLVTKSEDMIIEASTNDKLVTAETKEPDKR-----KTEAETKDDETA 424 (519)
Q Consensus 374 ------------------------~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~~~~~~-----~~~~~~~~~~~~ 424 (519)
.......+.+++|+|+|.++++++++...+|........ ....-.++...+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~l 407 (814)
T 3mkq_A 328 IFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSY 407 (814)
T ss_dssp EEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTTEEEEEEECSEEEECTTSSCE
T ss_pred eeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECccccccCCCceEEEEEeCCCCeE
Confidence 001223578899999999999999777777775432110 011122345556
Q ss_pred EeccccceeeeeccccccccccccceeccCC
Q 010051 425 INGSIAAESRLIEPERNEAESRKAEAETEDG 455 (519)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (519)
..+..++...+|.....+........+.+++
T Consensus 408 a~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg 438 (814)
T 3mkq_A 408 ALIDETGQIKYYKNFKEVTSWSVPMHSAIDR 438 (814)
T ss_dssp EEECTTCCEEEEETTEECTTCCCCCSSCCCE
T ss_pred EEEeCCCcEEEEECCCCccceEEcCCcCccc
Confidence 6677777788876555444443444444443
No 28
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-39 Score=308.73 Aligned_cols=326 Identities=16% Similarity=0.215 Sum_probs=257.4
Q ss_pred cCCCCCEEEEEEecCCC-EEEEEcCCCcEEEEEe----cCCcc------ccccccc-cccccccccCcceeEEEEccC--
Q 010051 10 WHDTKPVLTLDFHPISG-LLATGGADYDIKIWLI----NSGEK------QKKIPTA-SYQNSLSYHGSAINILRFSPC-- 75 (519)
Q Consensus 10 ~~h~~~V~~~~~sp~~~-~la~~~~dg~i~iwd~----~~~~~------~~~~~~~-~~~~~~~~~~~~v~~~~~~~~-- 75 (519)
..|.+.|++++|+|+++ +||+|+.||.|+||++ .+++. ...+... ........|...|.+++|+|+
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 44669999999999999 9999999999999999 87773 2222110 000112236789999999998
Q ss_pred -------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccC-
Q 010051 76 -------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHY- 147 (519)
Q Consensus 76 -------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~- 147 (519)
++.|++|+. .+ ..+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+...
T Consensus 122 ~l~~~~~dg~i~i~~~-~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 122 SIVTGVENGELRLWNK-TG------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp EEEEEETTSCEEEEET-TS------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred EEEEEeCCCeEEEEeC-CC------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 478999993 33 466777889999999999999999999999999999999999999888887776
Q ss_pred --------------eEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeee
Q 010051 148 --------------VQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFH 213 (519)
Q Consensus 148 --------------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (519)
+.++.|+++ ..+++++.+|.|++||+...+.. ..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~-------------------------------~~ 242 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPT-------------------------------GK 242 (425)
T ss_dssp -----------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCS-------------------------------EE
T ss_pred cceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCcee-------------------------------ee
Confidence 899999987 46889999999999999876421 11
Q ss_pred cCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCC
Q 010051 214 DETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAG 293 (519)
Q Consensus 214 ~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 293 (519)
...+...|.+++|+|++++|++++.+ +.+++|++... .....+..|...|.++.|+|++
T Consensus 243 ~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~---------- 301 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNKLLLSASDD----------GTLRIWHGGNG-NSQNCFYGHSQSIVSASWVGDD---------- 301 (425)
T ss_dssp ECCCSSCEEEEEEETTTTEEEEEETT----------SCEEEECSSSB-SCSEEECCCSSCEEEEEEETTT----------
T ss_pred eccCCCceEEEEECCCCCEEEEEcCC----------CEEEEEECCCC-ccceEecCCCccEEEEEECCCC----------
Confidence 12355778999999999999998877 68999998754 4566677899999999999986
Q ss_pred cccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccc--------
Q 010051 294 FFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELG-------- 365 (519)
Q Consensus 294 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~-------- 365 (519)
++++++.|+.|++||+.+++.+..+.. |...|++++|+|++++|++++.||.|++|++.+....
T Consensus 302 -------~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 373 (425)
T 1r5m_A 302 -------KVISCSMDGSVRLWSLKQNTLLALSIV-DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNR 373 (425)
T ss_dssp -------EEEEEETTSEEEEEETTTTEEEEEEEC-TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC---------
T ss_pred -------EEEEEeCCCcEEEEECCCCcEeEeccc-CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeeccc
Confidence 378888899999999999999999988 9999999999999999999999999999999876410
Q ss_pred ----------ceeeecCCcccccC-CCCcccccCCccEEEeecCCcee-eecC
Q 010051 366 ----------IPISLSGNKVSKDE-NKSPLVTKSEDMIIEASTNDKLV-TAET 406 (519)
Q Consensus 366 ----------~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~~~~~d~~i-~~~~ 406 (519)
....+.++. .. .+.+++|+|++.+|++++.|+.+ +|+.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 374 DGILNPLPIPLYASYQSSQ---DNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp -----CEECCEEEEECCTT---CCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred ccccCcccchhhhhhcCcc---cCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 122222322 12 88999999999999999988866 6653
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3e-39 Score=299.60 Aligned_cols=298 Identities=13% Similarity=0.080 Sum_probs=223.7
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCC-------cEEEEEecCCccccccccc-cccccccccCcceeEEEEccC--------
Q 010051 12 DTKPVLTLDFHPISGLLATGGADY-------DIKIWLINSGEKQKKIPTA-SYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg-------~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
-.-+|+|++|+||+++||+|+.+. .|+||++..+......... .....+..|...|.++++..+
T Consensus 13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~ 92 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNE 92 (365)
T ss_dssp CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCC
T ss_pred CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECC
Confidence 346899999999999999987543 5999999866543221111 112346678888888888654
Q ss_pred ----------CCeEEEEEcccCCCccccee-e--eccccCCCCeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCceEEE
Q 010051 76 ----------GGELIIWKLHTTETGQAWKV-L--KNLSFHRKDVLDLQWSTDGAFLLSGS--VDNSCIIWDVNKGSVLQI 140 (519)
Q Consensus 76 ----------~~~i~vw~~~~~~~~~~~~~-~--~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~ 140 (519)
++.+++|++........... . .....+...+.+++|||||++|++++ .|++|+|||+.+++.+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 57899999876533211111 1 11223456689999999999987554 689999999999999888
Q ss_pred ecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcce
Q 010051 141 LDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSF 220 (519)
Q Consensus 141 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (519)
+. |...|.+++|+|++++|++++.++ +.+|+..+++... ......+...
T Consensus 173 ~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~-----------------------------~~~~~~~~~~ 221 (365)
T 4h5i_A 173 IE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIA-----------------------------RKTDFDKNWS 221 (365)
T ss_dssp EE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEE-----------------------------EECCCCTTEE
T ss_pred eC-CCCceEEEEEccCCceEEecccee-EEEEEeccCccee-----------------------------eeecCCCCCC
Confidence 76 668899999999999999998554 6666665543110 0112235567
Q ss_pred eeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc---ccccCCCCCCCeEEEEEcCCcccccccCCCCcccc
Q 010051 221 FRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR---PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKL 297 (519)
Q Consensus 221 i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~ 297 (519)
|.+++|+|+++++++++.+.. ....+++|+...... ....+.+|...|++++|+|+|
T Consensus 222 v~~v~fspdg~~l~~~s~d~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg-------------- 281 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKG------KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG-------------- 281 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSS------CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS--------------
T ss_pred EEEEEEcCCCCEEEEEecCCc------ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC--------------
Confidence 899999999999999876531 112577788764432 234567889999999999998
Q ss_pred cceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 298 PYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 298 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
++|++|+.|+.|+|||+.+++++..+...|...|++++|||||++||+|+.|++|+||++...
T Consensus 282 --~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 282 --ELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp --CEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred --CceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 668889999999999999999998874339999999999999999999999999999999644
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-38 Score=293.16 Aligned_cols=283 Identities=17% Similarity=0.211 Sum_probs=240.1
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CC
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GG 77 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~ 77 (519)
....+|.+.|++++|+|++++|++++ ||.|+|||+.++.....+.. .....|...|.+++|+|+ ++
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 119 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ----LDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE----EECSCTTSBEEEEEECTTSSEEEEEESSS
T ss_pred ceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeec----ccccCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 34468999999999999999999999 99999999988765443211 112268889999999998 48
Q ss_pred eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCC
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLS 157 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 157 (519)
.|++|++..... .....+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++
T Consensus 120 ~i~~~d~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 120 TLSIWDLAAPTP----RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp EEEEEECCCC------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred cEEEEECCCCCc----ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCC
Confidence 899999987631 3556677899999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
++|++++.||.|++||++.++... ...+...+.+++|+|+++++++++
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~~~~~--------------------------------~~~~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREGRQLQ--------------------------------QHDFTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEE--------------------------------EEECSSCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEecCCcEEEEECCCCceEe--------------------------------eecCCCceEEEEECCCCCEEEEEc
Confidence 999999999999999998764211 012345688999999999999987
Q ss_pred CCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC
Q 010051 238 GSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE 317 (519)
Q Consensus 238 ~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~ 317 (519)
.+ +.+++|++.... ...+..|...+.+++|+|++ +++++++.||.|++||+.
T Consensus 244 ~~----------~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~----------------~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 244 ES----------SNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCG----------------KWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp TT----------SCEEEEETTSSC--EEEECCCSSCEEEEEECTTS----------------SEEEEEETTSEEEEEETT
T ss_pred CC----------CcEEEEECCCCC--eEEEcCCccceeEEEECCCC----------------CEEEEecCCCcEEEEECC
Confidence 76 689999997643 34567899999999999998 668888899999999999
Q ss_pred CCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEec
Q 010051 318 SVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~ 360 (519)
+++.+.... |...|++++|+|++++|++++.||.|++|++.
T Consensus 296 ~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 296 YGASIFQSK--ESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TCCEEEEEE--CSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCeEEEEec--CCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 998875543 78899999999999999999999999999974
No 31
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-39 Score=333.21 Aligned_cols=361 Identities=11% Similarity=0.115 Sum_probs=257.7
Q ss_pred eeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------
Q 010051 5 TLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC--------- 75 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------- 75 (519)
.......|...|++++|+| +++||+++.|++|+|||+.+++.+..+. |...|++++|+|+
T Consensus 50 ~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~----------~~~~V~~v~~sp~g~~l~sgs~ 118 (902)
T 2oaj_A 50 EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF----------VPGKITSIDTDASLDWMLIGLQ 118 (902)
T ss_dssp EEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE----------CSSCEEEEECCTTCSEEEEEET
T ss_pred EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc----------CCCCEEEEEECCCCCEEEEEcC
Confidence 3444567889999999999 8899999999999999999887655431 5678999999987
Q ss_pred CCeEEEEEcccCCCccccee--e----eccccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceEEEeccc----
Q 010051 76 GGELIIWKLHTTETGQAWKV--L----KNLSFHRKDVLDLQWSTD-GAFLLSGSVDNSCIIWDVNKGSVLQILDAH---- 144 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~--~----~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h---- 144 (519)
+|.|++||+...... .+.. . ..+.+|...|++++|+|+ +..|++|+.||.| +||+++++.+..+..|
T Consensus 119 dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g 196 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPF 196 (902)
T ss_dssp TSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTT
T ss_pred CCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCc
Confidence 589999999876211 0000 0 345779999999999996 5789999999999 9999999988887665
Q ss_pred --------------ccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCcccc--------------------------cc
Q 010051 145 --------------FHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGV--------------------------EK 184 (519)
Q Consensus 145 --------------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--------------------------~~ 184 (519)
...|.+++|+|++++|++++.||.|++||+++++.... ..
T Consensus 197 ~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~ 276 (902)
T 2oaj_A 197 APGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISK 276 (902)
T ss_dssp CCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEE
T ss_pred CCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeE
Confidence 46799999999999999999999999999987653211 00
Q ss_pred cccee------eEEEecc-Cc------c--ccc-----------------------------------------------
Q 010051 185 MNYVC------QHVITKA-GQ------H--STD----------------------------------------------- 202 (519)
Q Consensus 185 ~~~~~------~~~~~~~-~~------~--~~~----------------------------------------------- 202 (519)
..+.+ ...+... .. . ...
T Consensus 277 v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp 356 (902)
T 2oaj_A 277 VYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSP 356 (902)
T ss_dssp EEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCS
T ss_pred EEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCC
Confidence 00000 0111100 00 0 000
Q ss_pred -------------CCccccceeeecC----------------CCccee--------------------------------
Q 010051 203 -------------DSKSAKNHLFHDE----------------TLPSFF-------------------------------- 221 (519)
Q Consensus 203 -------------~~~~~~~~~~~~~----------------~~~~~i-------------------------------- 221 (519)
........++... .+...|
T Consensus 357 ~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~ 436 (902)
T 2oaj_A 357 YFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVR 436 (902)
T ss_dssp HHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBC
T ss_pred CcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcC
Confidence 0000111111110 011222
Q ss_pred --eEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCccc-ccC---------CCCCCCeEEEEEcCCccccccc
Q 010051 222 --RRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA-LQL---------PGASKPVVAVRFCPLAFNLRES 289 (519)
Q Consensus 222 --~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~-~~~---------~~~~~~v~~~~~sp~~~~l~~~ 289 (519)
.+++|+|++++|++++.+ +.|++||+....... ..+ .+|...|++++|+|++
T Consensus 437 ~v~sv~~spdg~~laSgs~D----------gtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg------ 500 (902)
T 2oaj_A 437 TKRQKLPAEYGTAFITGHSN----------GSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET------ 500 (902)
T ss_dssp CCCCCCCCSEEEEEEEEETT----------SEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT------
T ss_pred CCCcccccccCcEEEEecCC----------CcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC------
Confidence 334556788888887777 799999997652110 001 2788899999999999
Q ss_pred CCCCcccccceEEEEEecCCeEEEEeCCCCC---------------------------------------------ceEE
Q 010051 290 NSAGFFKLPYRLIFAIATLNSLYIYDTESVP---------------------------------------------PIAI 324 (519)
Q Consensus 290 ~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~---------------------------------------------~~~~ 324 (519)
++|++++.||+|+||++.+++ ++..
T Consensus 501 ----------~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 570 (902)
T 2oaj_A 501 ----------LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTA 570 (902)
T ss_dssp ----------TEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEE
T ss_pred ----------CeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEE
Confidence 668888889999999998663 3567
Q ss_pred EeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCccccc-----CCc---cEEEee
Q 010051 325 LAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTK-----SED---MIIEAS 396 (519)
Q Consensus 325 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-----~~~---~~l~~~ 396 (519)
+.+ |.+.|++++||||| +||+|+.|++|+|||+.+........+......+...|++++|+ ||| .+|+++
T Consensus 571 l~~-h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg 648 (902)
T 2oaj_A 571 VHA-NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG 648 (902)
T ss_dssp ECC-CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE
T ss_pred EEc-CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEE
Confidence 777 99999999999999 99999999999999987765432212211111234679999999 885 899999
Q ss_pred cCCcee-eecC
Q 010051 397 TNDKLV-TAET 406 (519)
Q Consensus 397 ~~d~~i-~~~~ 406 (519)
+.|+.+ +|+.
T Consensus 649 s~D~tv~~wd~ 659 (902)
T 2oaj_A 649 TDMGEVITYKI 659 (902)
T ss_dssp ETTSEEEEEEE
T ss_pred ecCCcEEEEEE
Confidence 999888 7764
No 32
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.6e-39 Score=299.30 Aligned_cols=310 Identities=12% Similarity=0.124 Sum_probs=214.5
Q ss_pred EEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC---------------CeEEE
Q 010051 17 LTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG---------------GELII 81 (519)
Q Consensus 17 ~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------~~i~v 81 (519)
..+.+.++..++.+. .+.....|++.... ...|...|++++|+||| +.|++
T Consensus 9 sg~d~g~~~~~~~~~-g~~~~~~w~~p~~~-------------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~ 74 (357)
T 4g56_B 9 SGVDLGTENLYFQSN-GSSKGSAWGRPVTA-------------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWV 74 (357)
T ss_dssp ---------------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEE
T ss_pred cCCCCCccceEEecC-CCccccccCCCCCC-------------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEE
Confidence 345566666555444 45678899875433 34599999999999985 45777
Q ss_pred EEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEE----EecccccCeEEEEEcCCC
Q 010051 82 WKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQ----ILDAHFHYVQGVAWDPLS 157 (519)
Q Consensus 82 w~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~h~~~v~~~~~~~~~ 157 (519)
|+...+.... .......+|...|++++|+|++. +++++.||+|+|||+.+++... ...+|...|++++|+|++
T Consensus 75 ~~~~~~~~~~--~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg 151 (357)
T 4g56_B 75 FKDPEGAPNE--SLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG 151 (357)
T ss_dssp ESSCC---CG--GGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS
T ss_pred EECCCCCcce--eEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC
Confidence 7766543221 22333456889999999999986 5567889999999998876542 345799999999999999
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCC-eEEEe
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGS-FLLVP 236 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~~~ 236 (519)
++|++++.||.|++||+.+++. +.....+...|.+++|+|++. .++++
T Consensus 152 ~~l~sgs~dg~v~iwd~~~~~~-------------------------------~~~~~~h~~~v~~v~~s~~~~~~~~s~ 200 (357)
T 4g56_B 152 TQAVSGGKDFSVKVWDLSQKAV-------------------------------LKSYNAHSSEVNCVAACPGKDTIFLSC 200 (357)
T ss_dssp SEEEEEETTSCEEEEETTTTEE-------------------------------EEEECCCSSCEEEEEECTTCSSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcE-------------------------------EEEEcCCCCCEEEEEEccCCCceeeee
Confidence 9999999999999999987642 112234567899999999986 56666
Q ss_pred cCCcceeeeecccceEEEEeccCCCccc-ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEe
Q 010051 237 AGSYKISSMSESINSAYIFSRKDLSRPA-LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYD 315 (519)
Q Consensus 237 ~~~~~~~~~~~~~~~i~i~~~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd 315 (519)
+.+ +.|++||++...... .....+...+.+++|+|++. .++++++.|+.|++||
T Consensus 201 ~~d----------g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~---------------~~la~g~~d~~i~~wd 255 (357)
T 4g56_B 201 GED----------GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD---------------DTFACGDETGNVSLVN 255 (357)
T ss_dssp ETT----------SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST---------------TEEEEEESSSCEEEEE
T ss_pred ccC----------CceEEEECCCCceeeeeeeccccccccchhhhhccc---------------ceEEEeecccceeEEE
Confidence 655 689999997654322 23456778899999999863 3578888999999999
Q ss_pred CCCCCceEEEeccccccEEEEEEcCCC-CEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccC-CccEE
Q 010051 316 TESVPPIAILAGLHYAAITDIAWSNNA-RYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKS-EDMII 393 (519)
Q Consensus 316 ~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l 393 (519)
+.+++.+..+.+ |...|++++|+|++ ++|++++.||+|+|||+.+++. +...+| ...|.+++|+| |+.+|
T Consensus 256 ~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~---~~~~~H----~~~V~~vafsP~d~~~l 327 (357)
T 4g56_B 256 IKNPDSAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV---FRDLSH----RDFVTGVAWSPLDHSKF 327 (357)
T ss_dssp SSCGGGCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE---EEECCC----SSCEEEEEECSSSTTEE
T ss_pred CCCCcEeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE---eEECCC----CCCEEEEEEeCCCCCEE
Confidence 999999999998 99999999999997 6899999999999999988754 333344 36899999998 78999
Q ss_pred EeecCCcee-eecCC
Q 010051 394 EASTNDKLV-TAETK 407 (519)
Q Consensus 394 ~~~~~d~~i-~~~~~ 407 (519)
++++.|+.| +|+..
T Consensus 328 ~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 328 TTVGWDHKVLHHHLP 342 (357)
T ss_dssp EEEETTSCEEEEECC
T ss_pred EEEcCCCeEEEEECC
Confidence 999988877 66643
No 33
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-38 Score=291.92 Aligned_cols=277 Identities=18% Similarity=0.271 Sum_probs=234.1
Q ss_pred cccccccCcceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 010051 57 QNSLSYHGSAINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSC 127 (519)
Q Consensus 57 ~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 127 (519)
...+.+|...|.+++|+|+ |+.|+|||+.++ ..+..+..|...|.+++|+|++++|++|+.|+.|
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT------NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC------CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC------CcceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 3457889999999999998 589999999877 5667778899999999999999999999999999
Q ss_pred EEEEcCCC----ceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccC
Q 010051 128 IIWDVNKG----SVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDD 203 (519)
Q Consensus 128 ~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (519)
++|++.++ .....+.+|...|.++.|++++. |++++.|+.|++||+.+++..
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~----------------------- 177 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT----------------------- 177 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE-----------------------
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE-----------------------
Confidence 99999875 35567789999999999998764 899999999999999876421
Q ss_pred CccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCc
Q 010051 204 SKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLA 283 (519)
Q Consensus 204 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 283 (519)
.....|...|.+++|+|+++++++++.+ +.+++||++.. .....+.+|...|++++|+|++
T Consensus 178 --------~~~~~h~~~v~~~~~~~~~~~l~sg~~d----------~~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~ 238 (340)
T 1got_B 178 --------TTFTGHTGDVMSLSLAPDTRLFVSGACD----------ASAKLWDVREG-MCRQTFTGHESDINAICFFPNG 238 (340)
T ss_dssp --------EEECCCSSCEEEEEECTTSSEEEEEETT----------SCEEEEETTTC-SEEEEECCCSSCEEEEEECTTS
T ss_pred --------EEEcCCCCceEEEEECCCCCEEEEEeCC----------CcEEEEECCCC-eeEEEEcCCcCCEEEEEEcCCC
Confidence 1122456789999999999999998877 69999999754 4566788999999999999998
Q ss_pred ccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec-cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 284 FNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG-LHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 284 ~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
+++++++.|+.|++||+.+++.+..+.. .+...|++++|+|+|++|++|+.||.|++||+...
T Consensus 239 ----------------~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 239 ----------------NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp ----------------SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ----------------CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 6688999999999999999887776653 13357999999999999999999999999999876
Q ss_pred cccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-ee
Q 010051 363 ELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TA 404 (519)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~ 404 (519)
+.. ..+.+|. ..|.+++|+|++.+|++++.|+.+ +|
T Consensus 303 ~~~--~~~~~h~----~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 303 DRA--GVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp CEE--EEEECCS----SCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred cEe--eEeecCC----CcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 533 3344544 688999999999999999998877 55
No 34
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-37 Score=288.20 Aligned_cols=297 Identities=18% Similarity=0.215 Sum_probs=239.6
Q ss_pred EecCCCCCEEEEEEecC-CCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 8 INWHDTKPVLTLDFHPI-SGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 8 ~~~~h~~~V~~~~~sp~-~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
.+.+|.+.|++|+|+|+ +++||||+.|++|+|||+.+.+....
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~------------------------------------ 76 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG------------------------------------ 76 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE------------------------------------
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc------------------------------------
Confidence 46799999999999998 57999999999999999987653211
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCC
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSD 166 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 166 (519)
.....+.+|...|.+++|+|++++|++++.|+.|++|+............+...+..+.+++++++|++++.|
T Consensus 77 -------~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 149 (340)
T 4aow_A 77 -------IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 149 (340)
T ss_dssp -------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred -------eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC
Confidence 2345567799999999999999999999999999999999998888888888999999999999999999999
Q ss_pred CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCC--eEEEecCCcceee
Q 010051 167 RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGS--FLLVPAGSYKISS 244 (519)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~--~l~~~~~~~~~~~ 244 (519)
+.+++||+..... .......+...+..++|++++. ++++++.+
T Consensus 150 ~~~~~~d~~~~~~------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d----- 194 (340)
T 4aow_A 150 KTIKLWNTLGVCK------------------------------YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD----- 194 (340)
T ss_dssp SCEEEECTTSCEE------------------------------EEECSSSCSSCEEEEEECSCSSSCEEEEEETT-----
T ss_pred CeEEEEEeCCCce------------------------------EEEEeccccCcccceEEccCCCCcEEEEEcCC-----
Confidence 9999999875421 1122234567788899988753 45565555
Q ss_pred eecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEE
Q 010051 245 MSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAI 324 (519)
Q Consensus 245 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 324 (519)
+.+++||+... .....+.+|...|++++|+|++ +++++++.|+.|++||+.+.+.+..
T Consensus 195 -----~~i~i~d~~~~-~~~~~~~~h~~~v~~~~~s~~~----------------~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 195 -----KLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDG----------------SLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp -----SCEEEEETTTT-EEEEEECCCSSCEEEEEECTTS----------------SEEEEEETTCEEEEEETTTTEEEEE
T ss_pred -----CEEEEEECCCC-ceeeEecCCCCcEEEEEECCCC----------------CEEEEEeCCCeEEEEEeccCceeee
Confidence 68999999754 4566778899999999999998 6688899999999999999999888
Q ss_pred EeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecC---CcccccCCCCcccccCCccEEEeecCCce
Q 010051 325 LAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSG---NKVSKDENKSPLVTKSEDMIIEASTNDKL 401 (519)
Q Consensus 325 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l~~~~~d~~ 401 (519)
+.. ...|.+++|+|++.++ +++.|+.|++||+........+.... ....+...|.+++|+|||.+|++++.|+.
T Consensus 253 ~~~--~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 253 LDG--GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp EEC--SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSC
T ss_pred ecC--CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 875 5689999999988655 55679999999998765433322111 11134568899999999999999999887
Q ss_pred e-eecCC
Q 010051 402 V-TAETK 407 (519)
Q Consensus 402 i-~~~~~ 407 (519)
| +|+..
T Consensus 330 v~iW~~~ 336 (340)
T 4aow_A 330 VRVWQVT 336 (340)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 7 66543
No 35
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=291.65 Aligned_cols=294 Identities=18% Similarity=0.288 Sum_probs=230.5
Q ss_pred ccccccCc-ceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 010051 58 NSLSYHGS-AINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSC 127 (519)
Q Consensus 58 ~~~~~~~~-~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 127 (519)
..+.+|.. .|.+++|+|+ |+.|+||++..+... .......+|...|.+++|+|++++|++|+.|++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~---~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI---CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE---EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce---eeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 44667887 8999999998 589999999765210 1122336799999999999999999999999999
Q ss_pred EEEEcCCCc--eEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCc
Q 010051 128 IIWDVNKGS--VLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSK 205 (519)
Q Consensus 128 ~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (519)
++||+.++. .+..+.+|...|.+++|+|++++|++++.|+.|++||+....... +
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~-------~---------------- 142 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE-------C---------------- 142 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE-------E----------------
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE-------E----------------
Confidence 999998764 567889999999999999999999999999999999998653210 0
Q ss_pred cccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC-cccccCCCCCCCeEEEEEcCCcc
Q 010051 206 SAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS-RPALQLPGASKPVVAVRFCPLAF 284 (519)
Q Consensus 206 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~ 284 (519)
+.....+...|.+++|+|++.+|++++.+ +.+++|+..... .+...+.+|...|++++|+|++
T Consensus 143 -----~~~~~~h~~~v~~~~~~p~~~~l~s~s~d----------~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g- 206 (345)
T 3fm0_A 143 -----VSVLNSHTQDVKHVVWHPSQELLASASYD----------DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG- 206 (345)
T ss_dssp -----EEEECCCCSCEEEEEECSSSSCEEEEETT----------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTS-
T ss_pred -----EEEecCcCCCeEEEEECCCCCEEEEEeCC----------CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCC-
Confidence 11123456779999999999999998877 689999987543 2345688999999999999998
Q ss_pred cccccCCCCcccccceEEEEEecCCeEEEEeCCCC---------------CceEEEeccccccEEEEEEcCCCCEEEEEe
Q 010051 285 NLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV---------------PPIAILAGLHYAAITDIAWSNNARYLALSS 349 (519)
Q Consensus 285 ~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~---------------~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 349 (519)
++|++++.|+.|++|+.... .++..+.+.|...|++++|+|++.+|++++
T Consensus 207 ---------------~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 207 ---------------QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATAC 271 (345)
T ss_dssp ---------------SEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEE
T ss_pred ---------------CEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEe
Confidence 66889999999999996321 234455555888999999999999999999
Q ss_pred CCCcEEEEEecCCccc--ceeeecCCc-ccccCCCCcccccCCc-cEEEeecCCcee-eecCCC
Q 010051 350 QDGYCTLVEFENDELG--IPISLSGNK-VSKDENKSPLVTKSED-MIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 350 ~dg~i~vwd~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~s~~~-~~l~~~~~d~~i-~~~~~~ 408 (519)
.|+.|++|++...... ....+..+. ..+...|.+++|+|++ .+|++++.|+.+ +|+...
T Consensus 272 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 272 GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred CCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 9999999999765321 111111111 1245789999999998 489999988877 666544
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.7e-38 Score=284.31 Aligned_cols=256 Identities=19% Similarity=0.258 Sum_probs=208.2
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
.++.+|.+.|++++|+|+|++||+|+.|++|+|||+..+..
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~--------------------------------------- 43 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH--------------------------------------- 43 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB---------------------------------------
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc---------------------------------------
Confidence 46679999999999999999999999999999999864321
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCc--eEEEecccccCeEEEEEcCC--CCeE
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTD--GAFLLSGSVDNSCIIWDVNKGS--VLQILDAHFHYVQGVAWDPL--SKYV 160 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l 160 (519)
+.+..+.+|...|++++|+++ +++|++|+.|++|++||+.+++ .+..+..|...|.+++|+|+ +.+|
T Consensus 44 -------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l 116 (297)
T 2pm7_B 44 -------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPML 116 (297)
T ss_dssp -------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEE
T ss_pred -------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEE
Confidence 234456679999999999863 8999999999999999998874 55677889999999999997 8899
Q ss_pred EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC-----------
Q 010051 161 ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD----------- 229 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~----------- 229 (519)
++++.|+.|++||++...... ......|...|.+++|+|+
T Consensus 117 ~s~s~d~~v~~wd~~~~~~~~-----------------------------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~ 167 (297)
T 2pm7_B 117 LVASSDGKVSVVEFKENGTTS-----------------------------PIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (297)
T ss_dssp EEEETTSEEEEEEBCSSSCBC-----------------------------CEEEECCSSCEEEEEECCCC----------
T ss_pred EEEECCCcEEEEEecCCCcee-----------------------------eeeeecccCccceEeecCCcccccccCCCC
Confidence 999999999999998653110 0111245567889999997
Q ss_pred --CCeEEEecCCcceeeeecccceEEEEeccCCCc---ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEE
Q 010051 230 --GSFLLVPAGSYKISSMSESINSAYIFSRKDLSR---PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFA 304 (519)
Q Consensus 230 --g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~ 304 (519)
+++|++++.+ +.|++||+..... ....+.+|...|.+++|+|++.. + .++++
T Consensus 168 ~~~~~l~sgs~D----------~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~-------~------~~las 224 (297)
T 2pm7_B 168 KESRKFVTGGAD----------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL-------R------SYMAS 224 (297)
T ss_dssp --CCEEEEEETT----------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS-------S------EEEEE
T ss_pred CCcceEEEEcCC----------CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCC-------c------eEEEE
Confidence 5688888777 6999999875432 34567899999999999998510 1 57899
Q ss_pred EecCCeEEEEeCCCCC--ce-EEE--eccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 305 IATLNSLYIYDTESVP--PI-AIL--AGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 305 ~~~d~~i~vwd~~~~~--~~-~~~--~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
++.|++|++||+.+.. .. ..+ .. |...|.+++|+|+|++||+++.||.|+||+...
T Consensus 225 ~s~D~~v~iWd~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSC-CSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EECCCcEEEEEeCCCCCccceeeeeccc-CCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9999999999998743 12 223 34 788999999999999999999999999999864
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-38 Score=320.26 Aligned_cols=299 Identities=17% Similarity=0.205 Sum_probs=240.1
Q ss_pred EEecCCCCCEEEEEEecCC-CEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 7 QINWHDTKPVLTLDFHPIS-GLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~-~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
..+.+|.+.|++|+|+|++ ++|++|+.|++|+||++........
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~----------------------------------- 420 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYG----------------------------------- 420 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSC-----------------------------------
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccc-----------------------------------
Confidence 3567999999999999875 6999999999999999876532110
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 165 (519)
.....+.+|...|.+++|+|++++|++|+.||+|++||+.++..+..+.+|...|.+++|+|++++|++++.
T Consensus 421 --------~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 421 --------VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR 492 (694)
T ss_dssp --------EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred --------cccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC
Confidence 234456679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCC--CeEEEecCCccee
Q 010051 166 DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDG--SFLLVPAGSYKIS 243 (519)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g--~~l~~~~~~~~~~ 243 (519)
|++|++||+..... ..+ ......|...|.+++|+|++ ..+++++.+
T Consensus 493 D~~i~iwd~~~~~~-----------~~~-----------------~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d---- 540 (694)
T 3dm0_A 493 DRTIKLWNTLGECK-----------YTI-----------------SEGGEGHRDWVSCVRFSPNTLQPTIVSASWD---- 540 (694)
T ss_dssp TSCEEEECTTSCEE-----------EEE-----------------CSSTTSCSSCEEEEEECSCSSSCEEEEEETT----
T ss_pred CCEEEEEECCCCcc-----------eee-----------------ccCCCCCCCcEEEEEEeCCCCcceEEEEeCC----
Confidence 99999999754311 000 00112456779999999987 568887776
Q ss_pred eeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceE
Q 010051 244 SMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIA 323 (519)
Q Consensus 244 ~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 323 (519)
+.|++||+... .....+.+|...|++++|+|++ +++++++.|+.|++||+.+++.+.
T Consensus 541 ------~~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg----------------~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 541 ------KTVKVWNLSNC-KLRSTLAGHTGYVSTVAVSPDG----------------SLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp ------SCEEEEETTTC-CEEEEECCCSSCEEEEEECTTS----------------SEEEEEETTSBCEEEETTTTEEEE
T ss_pred ------CeEEEEECCCC-cEEEEEcCCCCCEEEEEEeCCC----------------CEEEEEeCCCeEEEEECCCCceEE
Confidence 69999999754 4566788999999999999998 668899999999999999998887
Q ss_pred EEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCc-----------c--cccCCCCcccccCCc
Q 010051 324 ILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNK-----------V--SKDENKSPLVTKSED 390 (519)
Q Consensus 324 ~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~s~~~ 390 (519)
.+.. ...|.+++|+|++.+|++++ |+.|+|||+.++.....+...... . .....+.+++|+|+|
T Consensus 598 ~~~~--~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg 674 (694)
T 3dm0_A 598 SLEA--NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG 674 (694)
T ss_dssp CCBC--SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTS
T ss_pred EecC--CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCC
Confidence 7764 56899999999998887765 667999999987654433221110 0 011135678999999
Q ss_pred cEEEeecCCcee-eecC
Q 010051 391 MIIEASTNDKLV-TAET 406 (519)
Q Consensus 391 ~~l~~~~~d~~i-~~~~ 406 (519)
.+|++++.|+.| +|+.
T Consensus 675 ~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 675 STLFSGYTDGVIRVWGI 691 (694)
T ss_dssp SEEEEEETTSEEEEEEC
T ss_pred CEEEEEcCCCeEEEEec
Confidence 999999999988 6654
No 38
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.9e-38 Score=291.45 Aligned_cols=316 Identities=13% Similarity=0.117 Sum_probs=251.7
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------CCeEEEEE
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC--------GGELIIWK 83 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~i~vw~ 83 (519)
|.+.|.+++|+|||++++++..++.+.+|....... ......|...|.+++|+|+ ++.|++|+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~ 78 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHAR---------QINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWD 78 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEE---------EEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccc---------cceeccCCCceEEEEEecCCcEEEEcCCCeEEEEE
Confidence 457899999999999999888777666664332221 1123468999999999988 48899999
Q ss_pred cccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eEEEecccccCeEEEEEcCCCCeEE
Q 010051 84 LHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS--VLQILDAHFHYVQGVAWDPLSKYVA 161 (519)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~ 161 (519)
+..+......... ...+|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|++++|+
T Consensus 79 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 157 (337)
T 1gxr_A 79 ISHPGNKSPVSQL-DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 157 (337)
T ss_dssp TTSTTCCSCSEEE-ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred CCCCCceeeeecc-cccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEE
Confidence 9876433221111 122689999999999999999999999999999999887 5667788999999999999999999
Q ss_pred EeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcc
Q 010051 162 SLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYK 241 (519)
Q Consensus 162 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~ 241 (519)
+++.||.|++||+++++.. .....+...+.+++|+|+++++++++.+
T Consensus 158 ~~~~dg~v~~~d~~~~~~~-------------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 204 (337)
T 1gxr_A 158 SCCSDGNIAVWDLHNQTLV-------------------------------RQFQGHTDGASCIDISNDGTKLWTGGLD-- 204 (337)
T ss_dssp EEETTSCEEEEETTTTEEE-------------------------------EEECCCSSCEEEEEECTTSSEEEEEETT--
T ss_pred EEeCCCcEEEEeCCCCcee-------------------------------eeeecccCceEEEEECCCCCEEEEEecC--
Confidence 9999999999999875421 1112356778999999999999998877
Q ss_pred eeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCc
Q 010051 242 ISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPP 321 (519)
Q Consensus 242 ~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~ 321 (519)
+.+++||+..... ... ..+...+.+++|+|++ +++++++.++.|++||+.+++.
T Consensus 205 --------g~i~~~d~~~~~~-~~~-~~~~~~v~~~~~s~~~----------------~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 205 --------NTVRSWDLREGRQ-LQQ-HDFTSQIFSLGYCPTG----------------EWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp --------SEEEEEETTTTEE-EEE-EECSSCEEEEEECTTS----------------SEEEEEETTSCEEEEETTSSCE
T ss_pred --------CcEEEEECCCCce-Eee-ecCCCceEEEEECCCC----------------CEEEEEcCCCcEEEEECCCCCe
Confidence 6899999976432 222 2467789999999998 5678888899999999998775
Q ss_pred eEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCce
Q 010051 322 IAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKL 401 (519)
Q Consensus 322 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~ 401 (519)
. .+.. |...|++++|+|++++|++++.||.|++|++.+++..... . +...+.+++|+|++.+|++++.|+.
T Consensus 259 ~-~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~----~~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 259 Y-QLHL-HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS---K----ESSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp E-EECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE---E----CSSCEEEEEECTTSCEEEEEETTSC
T ss_pred E-EEcC-CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe---c----CCCcEEEEEECCCCCEEEEecCCCe
Confidence 4 5566 8999999999999999999999999999999887543221 1 2467889999999999999998886
Q ss_pred e-eec
Q 010051 402 V-TAE 405 (519)
Q Consensus 402 i-~~~ 405 (519)
+ +|+
T Consensus 330 i~iw~ 334 (337)
T 1gxr_A 330 ATVYE 334 (337)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 6 554
No 39
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=290.86 Aligned_cols=295 Identities=15% Similarity=0.224 Sum_probs=236.9
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CC
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GG 77 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~ 77 (519)
..+.+|.+.|++++|+|++++||+|+.||.|+|||+.+++.... +..|...|.+++|+|+ ++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~---------~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGT---------LDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEE---------ECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhh---------hhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 44689999999999999999999999999999999998875543 5679999999999987 58
Q ss_pred eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCc-----------eEEEe
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD-----NSCIIWDVNKGS-----------VLQIL 141 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~-----------~~~~~ 141 (519)
.|++||+.++ +.+..+. +...+.+++|+|++++|++++.+ +.|.+||+..+. .+..+
T Consensus 97 ~i~iwd~~~~------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 97 SIKLWDVSNG------QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEEEEETTTC------CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred eEEEEECCCC------cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 9999999877 4555555 88899999999999999999998 999999998653 33445
Q ss_pred ccccc--CeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcc
Q 010051 142 DAHFH--YVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPS 219 (519)
Q Consensus 142 ~~h~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (519)
..|.. .+.+++|+|++++|++++.||.|++||++.... . +.....+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---------~---------------------~~~~~~~~~ 219 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE---------Y---------------------VDSIDLHEK 219 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTE---------E---------------------EEEEECCSS
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE---------e---------------------EEEEecCCC
Confidence 55665 899999999999999999999999999987321 0 111123457
Q ss_pred eeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccc
Q 010051 220 FFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPY 299 (519)
Q Consensus 220 ~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~ 299 (519)
.|.+++|+|++.+|++++.+ +.+++||+.... ....+. +...+..+.|+|++.+++++..++...
T Consensus 220 ~v~~~~~~~~~~~l~~~~~d----------~~i~v~d~~~~~-~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 284 (369)
T 3zwl_B 220 SISDMQFSPDLTYFITSSRD----------TNSFLVDVSTLQ-VLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKD--- 284 (369)
T ss_dssp CEEEEEECTTSSEEEEEETT----------SEEEEEETTTCC-EEEEEE-CSSCEEEEEECSSSSEEEEEECCC------
T ss_pred ceeEEEECCCCCEEEEecCC----------ceEEEEECCCCc-eeeeec-CCCCceeEEecCCCceEEEeecCCCce---
Confidence 78999999999999998877 699999997643 333333 678899999999996665554443211
Q ss_pred eEEEEEe--cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 300 RLIFAIA--TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 300 ~~~~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
...... ....+++||+.+++.+..+.+ |...|++++|+|++++|++++.||.|++|++..+..
T Consensus 285 -~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 285 -VTTTSANEGKFEARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp -----------CEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred -EEEEecCCCcceeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 111111 122899999999999999998 999999999999999999999999999999987643
No 40
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=286.72 Aligned_cols=281 Identities=14% Similarity=0.124 Sum_probs=212.5
Q ss_pred ccCcceeEEEEccCCC--------eEEEEEccc-----CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 010051 62 YHGSAINILRFSPCGG--------ELIIWKLHT-----TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCI 128 (519)
Q Consensus 62 ~~~~~v~~~~~~~~~~--------~i~vw~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 128 (519)
.|...|.+++|+|+|. ++++||... ...............+...|.+++|+|++ .|++|+.||+|+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~ 106 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVE 106 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred cccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEE
Confidence 4677899999999964 334554221 00000001111122356789999999985 688999999999
Q ss_pred EEEcCCCceEEE----ecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCC
Q 010051 129 IWDVNKGSVLQI----LDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDS 204 (519)
Q Consensus 129 vwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (519)
|||+.+++.+.. +.+|...|++++|+|++++|++++.|++|++||+.+++.
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~------------------------- 161 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV------------------------- 161 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-------------------------
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-------------------------
Confidence 999999875543 458999999999999999999999999999999987642
Q ss_pred ccccceeeecCCCcceeeEEEEccCCC-eEEEecCCcceeeeecccceEEEEeccCCCcccccC--CCCCCCeEEEEEcC
Q 010051 205 KSAKNHLFHDETLPSFFRRLAWSPDGS-FLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQL--PGASKPVVAVRFCP 281 (519)
Q Consensus 205 ~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--~~~~~~v~~~~~sp 281 (519)
+.....|...|.+++|+|++. .+++++.+ +.|++||++.... ...+ ..+...+.+++|+|
T Consensus 162 ------~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D----------~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 162 ------LSSYRAHAAQVTCVAASPHKDSVFLSCSED----------NRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHP 224 (344)
T ss_dssp ------EEEECCCSSCEEEEEECSSCTTEEEEEETT----------SCEEEEETTSSSC-EEECC----CCCEEEEEECS
T ss_pred ------EEEEcCcCCceEEEEecCCCCCceeeeccc----------cccccccccccce-eeeeecceeeccceeeeecC
Confidence 122235678899999999986 56666666 6999999976543 3333 35566799999999
Q ss_pred CcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCC-CEEEEEeCCCcEEEEEec
Q 010051 282 LAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNA-RYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 282 ~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~~dg~i~vwd~~ 360 (519)
++. +++++|+.|+.|++||+++++++..+.+ |...|++++|+|++ ++|++|+.|++|+|||+.
T Consensus 225 ~~~---------------~~l~sg~~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 225 QQS---------------EVFVFGDENGTVSLVDTKSTSCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp SCT---------------TEEEEEETTSEEEEEESCC--CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred CCC---------------cceEEeccCCcEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 653 4578889999999999999999999999 99999999999998 589999999999999998
Q ss_pred CCcccceeeecCCcccccCCCCcccccCCcc-EEEeecCCcee-eecCCC
Q 010051 361 NDELGIPISLSGNKVSKDENKSPLVTKSEDM-IIEASTNDKLV-TAETKE 408 (519)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~d~~i-~~~~~~ 408 (519)
+++ .+.+.+|. ..|.+++|+|++. +|++++.|+.| +|....
T Consensus 289 ~~~---~~~~~~H~----~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 289 LSE---LFRSQAHR----DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CCE---EEEECCCS----SCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred CCc---EEEEcCCC----CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 774 34455554 6899999999986 56788877766 665543
No 41
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9e-39 Score=298.85 Aligned_cols=291 Identities=16% Similarity=0.246 Sum_probs=238.8
Q ss_pred cccccccCcceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 010051 57 QNSLSYHGSAINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSC 127 (519)
Q Consensus 57 ~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 127 (519)
...+.+|.+.|++++|+|+ |+.|+|||+.++ +....+..|...|.+++|+|+|++|++|+.|+.|
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~------~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS------QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT------EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 3457889999999999998 589999999877 6777888899999999999999999999999999
Q ss_pred EEEEcCCCc-------eEEEecccccCeEEEEEcCC-CCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcc
Q 010051 128 IIWDVNKGS-------VLQILDAHFHYVQGVAWDPL-SKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQH 199 (519)
Q Consensus 128 ~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (519)
++||+.+.. ....+.+|.+.|.++.|+|+ +..|++++.|++|++||+.+++.......
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-------------- 198 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS-------------- 198 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC--------------
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec--------------
Confidence 999997532 34567899999999999997 45799999999999999988753211000
Q ss_pred cccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEE
Q 010051 200 STDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVR 278 (519)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~ 278 (519)
.....|...|.+++|+| ++.++++++.+ +.|++||++........+.+|...|++++
T Consensus 199 ------------~~~~~h~~~v~~~~~~~~~~~~l~sgs~D----------~~v~~wd~~~~~~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 199 ------------EFPSGHTADVLSLSINSLNANMFISGSCD----------TTVRLWDLRITSRAVRTYHGHEGDINSVK 256 (380)
T ss_dssp ------------CSSSSCCSCEEEEEECSSSCCEEEEEETT----------SCEEEEETTTTCCCCEEECCCSSCCCEEE
T ss_pred ------------ccCCCCccCeEEEEeecCCCCEEEEEECC----------CeEEEEECCCCCcceEEECCcCCCeEEEE
Confidence 01124567788999987 78899998877 79999999866677788899999999999
Q ss_pred EcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEecccc-------ccEEEEEEcCCCCEEEEEeCC
Q 010051 279 FCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHY-------AAITDIAWSNNARYLALSSQD 351 (519)
Q Consensus 279 ~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-------~~i~~~~~s~~g~~l~~~~~d 351 (519)
|+|++ .++++++.|++|++||+.++..+..+.. +. ..|++++|+|+|++|++|+.|
T Consensus 257 ~~p~~----------------~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 257 FFPDG----------------QRFGTGSDDGTCRLFDMRTGHQLQVYNR-EPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp ECTTS----------------SEEEEECSSSCEEEEETTTTEEEEEECC-CCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred EecCC----------------CeEEEEcCCCeEEEEECCCCcEEEEecc-cccccccccCceEEEEECCCCCEEEEEECC
Confidence 99998 6688888999999999999998887765 32 248999999999999999999
Q ss_pred CcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCC
Q 010051 352 GYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 352 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~ 408 (519)
|.|++||+..++....+ ......+...|.+++|+|+|.+|++++.|+.+ +|+...
T Consensus 320 g~i~vwd~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVLNL--GTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCEEEEETTTCCEEEEE--CCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEECCCCceEEEE--ecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 99999999877543322 11122345789999999999999999999888 776543
No 42
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.3e-38 Score=293.56 Aligned_cols=297 Identities=18% Similarity=0.193 Sum_probs=232.4
Q ss_pred eeEEecCCCCCEEEEEEecCC-CEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 5 TLQINWHDTKPVLTLDFHPIS-GLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~sp~~-~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
....+.+|.+.|++++|+|++ ++||+|+.||.|+|||+.+++....+ .+.+|...|.+++|+|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI-------QGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE-------CCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee-------ecCCcCCceeEEEeCCCCCCEEEEE
Confidence 355668899999999999999 89999999999999999987755432 23468999999999993
Q ss_pred --CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEE
Q 010051 76 --GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAW 153 (519)
Q Consensus 76 --~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 153 (519)
++.|++||+... ....+.....|...|.+++|+|++++|++|+.|+.|++||+ +++.+..+..|...|.+++|
T Consensus 138 ~~d~~i~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 138 SIRGATTLRDFSGS----VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp ETTTEEEEEETTSC----EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEE
T ss_pred eCCCEEEEEECCCC----ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEE
Confidence 689999999842 12333333456688999999999999999999999999999 67788889999999999999
Q ss_pred cCCCC-eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CCC
Q 010051 154 DPLSK-YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGS 231 (519)
Q Consensus 154 ~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~ 231 (519)
+|+++ +|++++.|+.|++||++..+.... ......+...|.+++|+| ++.
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~----------------------------~~~~~~~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNS----------------------------YIAEMPHEKPVNAAYFNPTDST 264 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTC----------------------------EEEEEECSSCEEEEEECTTTSC
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccc----------------------------eEEEecCCCceEEEEEcCCCCC
Confidence 99999 899999999999999987432110 011113567899999999 999
Q ss_pred eEEEecCCcceeeeecccceEEEEeccCCCccccc------CCCCCCCeEEEEEcCCcccccccC-CCCcccccceEEEE
Q 010051 232 FLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQ------LPGASKPVVAVRFCPLAFNLRESN-SAGFFKLPYRLIFA 304 (519)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~------~~~~~~~v~~~~~sp~~~~l~~~~-~~g~~~~~~~~~~~ 304 (519)
+|++++.+ +.+++||+......... ...|...+. +.|+|++..++.+. .++ .+ +
T Consensus 265 ~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s~dg------~~--s 325 (383)
T 3ei3_B 265 KLLTTDQR----------NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRYPDD------QL--L 325 (383)
T ss_dssp EEEEEESS----------SEEEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEECBCCT------TT--C
T ss_pred EEEEEcCC----------CcEEEEECCCCccccccccccccccccccceE-EeccCCCCceEEEecCCc------cc--c
Confidence 99998877 69999999765432211 122334444 46676665544332 233 23 6
Q ss_pred EecCCeEEEEeCCCCCceEEEecc-ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 305 IATLNSLYIYDTESVPPIAILAGL-HYAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 305 ~~~d~~i~vwd~~~~~~~~~~~~~-~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
++.|+.|++||+.+++.+..+.+. |...+..++|+|++++|++++ ||.|++||+++
T Consensus 326 ~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 326 LNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred cCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 777889999999999999999862 356677889999999999997 99999999864
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-39 Score=309.20 Aligned_cols=300 Identities=17% Similarity=0.187 Sum_probs=227.9
Q ss_pred EecCCCCCEEEEEEec-CCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC----------C
Q 010051 8 INWHDTKPVLTLDFHP-ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC----------G 76 (519)
Q Consensus 8 ~~~~h~~~V~~~~~sp-~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~ 76 (519)
...+|...|+||+|+| ++++||+|+.||.|+|||+.+++.... ..+.+|.+.|++|+|+|. |
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~-------~~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTF-------IKGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEE-------ECCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeE-------EEccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 3457889999999999 467999999999999999987764332 235679999999999984 5
Q ss_pred CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCC
Q 010051 77 GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPL 156 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 156 (519)
++|++||++... .........+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+|+
T Consensus 187 ~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 187 GTTRLQDFKGNI----LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp SCEEEEETTSCE----EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTT
T ss_pred CEEEEeeccCCc----eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCC
Confidence 889999997541 12233333455678899999999999999999999999985 4566788999999999999998
Q ss_pred CC-eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEE
Q 010051 157 SK-YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLV 235 (519)
Q Consensus 157 ~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~ 235 (519)
+. +|++++.|+.|++||++..+.... +.....|...|.+++|+|+|.+|++
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~~----------------------------~~~~~~h~~~v~~~~~spdg~~l~s 313 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKAS----------------------------FLYSLPHRHPVNAACFSPDGARLLT 313 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSSC----------------------------CSBCCBCSSCEEECCBCTTSSEEEE
T ss_pred CceEEEEecCcceeeEEecccccccce----------------------------EEEeeeccccccceeECCCCCeeEE
Confidence 76 678999999999999987653211 1122245678999999999999999
Q ss_pred ecCCcceeeeecccceEEEEeccCCCcccccCCCCC------CCeEEEEEcCCcccccccCC-CCcccccceEEEEEecC
Q 010051 236 PAGSYKISSMSESINSAYIFSRKDLSRPALQLPGAS------KPVVAVRFCPLAFNLRESNS-AGFFKLPYRLIFAIATL 308 (519)
Q Consensus 236 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~------~~v~~~~~sp~~~~l~~~~~-~g~~~~~~~~~~~~~~d 308 (519)
++.+ +.|++||+....... .+..|. ..+..+.|+|++..++.+.. ++. ..++++..+
T Consensus 314 ~~~D----------~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-----~~~~~~~~~ 377 (435)
T 4e54_B 314 TDQK----------SEIRVYSASQWDCPL-GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN-----FKSCTPYEL 377 (435)
T ss_dssp EESS----------SCEEEEESSSSSSEE-EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTT-----SCCSSTTCC
T ss_pred EcCC----------CEEEEEECCCCccce-EEecccccccccceeEEEEEcCCCCEEEEEEcCCCC-----eEEEEecCC
Confidence 8877 699999997654332 222222 12345678888877665543 331 122333445
Q ss_pred CeEEEEeCCCCCceEEEeccccccEEEE-EEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 309 NSLYIYDTESVPPIAILAGLHYAAITDI-AWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~-~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
+.|++||..+++.+..+...|...|.++ +|+|+|++|++|+ |+.|+||++..++.
T Consensus 378 ~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 378 RTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred CEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 6899999999999988876588889887 6999999999876 88999999987753
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-37 Score=291.98 Aligned_cols=298 Identities=14% Similarity=0.175 Sum_probs=239.6
Q ss_pred EecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccC
Q 010051 8 INWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTT 87 (519)
Q Consensus 8 ~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~ 87 (519)
++..|.++|++++|+|++++||+|+.|+.|+|||+.+++.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~---------------------------------------- 42 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW---------------------------------------- 42 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE----------------------------------------
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE----------------------------------------
Confidence 4456899999999999999999999999999999876531
Q ss_pred CCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEE--ecccccCeEEEEEcCCCCeEEEeeC
Q 010051 88 ETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQI--LDAHFHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~ 165 (519)
..+..+.+|...|++++|+|++++|++++.||.|++||+.+++.... +..|...|.+++|+|++++|++++.
T Consensus 43 ------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 116 (372)
T 1k8k_C 43 ------VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG 116 (372)
T ss_dssp ------EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET
T ss_pred ------EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeC
Confidence 23444556899999999999999999999999999999998875443 4678899999999999999999999
Q ss_pred CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeee
Q 010051 166 DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSM 245 (519)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~ 245 (519)
||.|++||+........ .......+...|.+++|+|+++++++++.+
T Consensus 117 d~~v~i~d~~~~~~~~~---------------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------ 163 (372)
T 1k8k_C 117 SRVISICYFEQENDWWV---------------------------CKHIKKPIRSTVLSLDWHPNSVLLAAGSCD------ 163 (372)
T ss_dssp TSSEEEEEEETTTTEEE---------------------------EEEECTTCCSCEEEEEECTTSSEEEEEETT------
T ss_pred CCEEEEEEecCCCccee---------------------------eeeeecccCCCeeEEEEcCCCCEEEEEcCC------
Confidence 99999999987642100 001112456789999999999999998877
Q ss_pred ecccceEEEEecc-----------------CCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecC
Q 010051 246 SESINSAYIFSRK-----------------DLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL 308 (519)
Q Consensus 246 ~~~~~~i~i~~~~-----------------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d 308 (519)
+.+++||+. ........+..|...|.+++|+|++ +++++++.|
T Consensus 164 ----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------~~l~~~~~d 223 (372)
T 1k8k_C 164 ----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG----------------SRVAWVSHD 223 (372)
T ss_dssp ----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS----------------SEEEEEETT
T ss_pred ----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC----------------CEEEEEeCC
Confidence 689999964 2235566677899999999999988 568889999
Q ss_pred CeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC--Ccccceeee----------------
Q 010051 309 NSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN--DELGIPISL---------------- 370 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~--~~~~~~~~~---------------- 370 (519)
+.|++||+.+++.+..+.. |...|++++|+|++++|+++ .|+.|++|++.. +.+.....+
T Consensus 224 ~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (372)
T 1k8k_C 224 STVCLADADKKMAVATLAS-ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARER 301 (372)
T ss_dssp TEEEEEEGGGTTEEEEEEC-SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHH
T ss_pred CEEEEEECCCCceeEEEcc-CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhh
Confidence 9999999999999999998 99999999999999988887 899999999988 421110000
Q ss_pred -----------------cCCcccccCCCCccccc-CCc---cEEEeecCCcee-eecC
Q 010051 371 -----------------SGNKVSKDENKSPLVTK-SED---MIIEASTNDKLV-TAET 406 (519)
Q Consensus 371 -----------------~~~~~~~~~~~~~~~~s-~~~---~~l~~~~~d~~i-~~~~ 406 (519)
......+...|.+++|+ ++| .+|++++.|+.+ +|+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 302 FQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp HHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred hhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 00011345688899866 666 899999988887 6654
No 45
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.7e-37 Score=309.17 Aligned_cols=398 Identities=13% Similarity=0.128 Sum_probs=279.4
Q ss_pred cCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCC----ccccccccccccccccccCcc-eeEEEEcc--C-------
Q 010051 10 WHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSG----EKQKKIPTASYQNSLSYHGSA-INILRFSP--C------- 75 (519)
Q Consensus 10 ~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~--~------- 75 (519)
..|.+.|++++|+|++++||+++ ++.|+|||+.++ +.. ..+.+|... |.+++|+| +
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~---------~~~~~h~~~~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPV---------VQFTGHGSSVVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSE---------EEECTTTTSCEEEEEECSSTTCCEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccc---------eEEecCCCceEEEEEECcCCCCCEEEEe
Confidence 45889999999999999999998 789999999977 433 346779999 99999999 7
Q ss_pred --CCeEEEEEcccC------CC--ccc--------------------------------------ceeeeccccCCCCeE
Q 010051 76 --GGELIIWKLHTT------ET--GQA--------------------------------------WKVLKNLSFHRKDVL 107 (519)
Q Consensus 76 --~~~i~vw~~~~~------~~--~~~--------------------------------------~~~~~~~~~~~~~v~ 107 (519)
++.|++|++.++ .. ... .+.+..+.+|...|.
T Consensus 85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~ 164 (615)
T 1pgu_A 85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRIN 164 (615)
T ss_dssp ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEE
T ss_pred cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEE
Confidence 589999999633 00 000 011233445777788
Q ss_pred EEEEcCCCC-EEEEEeCCCeEEEEEcCCCceEEEeccccc---CeEEEEEcCC-CCeEEEeeCCCeEEEEecCCCCcccc
Q 010051 108 DLQWSTDGA-FLLSGSVDNSCIIWDVNKGSVLQILDAHFH---YVQGVAWDPL-SKYVASLSSDRTCRIYANRPTKSKGV 182 (519)
Q Consensus 108 ~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~ 182 (519)
+++|+|+++ +|++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ +++|++++.||.|++||+.+++....
T Consensus 165 ~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 888888876 788999999999999999999999999998 9999999999 99999999999999999988765433
Q ss_pred c-c----ccc-eeeEEEeccCcccccCCccccceeeecC-------------CCcceeeEEEEccCCCeEEEecCCccee
Q 010051 183 E-K----MNY-VCQHVITKAGQHSTDDSKSAKNHLFHDE-------------TLPSFFRRLAWSPDGSFLLVPAGSYKIS 243 (519)
Q Consensus 183 ~-~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~i~~~~~sp~g~~l~~~~~~~~~~ 243 (519)
. . ... .....+. .+..+..........++... .....+.++.|+ ++.++++++.+
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~---- 318 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLD---- 318 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETT----
T ss_pred ecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECC----
Confidence 3 1 111 1112222 33333333333333333322 123556677775 88888888777
Q ss_pred eeecccceEEEEeccCCCcccccC---------------------------------CCCCCCeEEEEEcCCcccccccC
Q 010051 244 SMSESINSAYIFSRKDLSRPALQL---------------------------------PGASKPVVAVRFCPLAFNLRESN 290 (519)
Q Consensus 244 ~~~~~~~~i~i~~~~~~~~~~~~~---------------------------------~~~~~~v~~~~~sp~~~~l~~~~ 290 (519)
+.+++||+.. ..+...+ ..|...|.+++| +++..+++++
T Consensus 319 ------g~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~ 390 (615)
T 1pgu_A 319 ------GTLNFYELGH-DEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSIS 390 (615)
T ss_dssp ------SCEEEEETTE-EEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEE
T ss_pred ------CCEEEEECCC-CcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEe
Confidence 4566666543 2222333 345555666666 4466666666
Q ss_pred CCCccccc---------------------------------------------------------ceEEEEEec-CCeEE
Q 010051 291 SAGFFKLP---------------------------------------------------------YRLIFAIAT-LNSLY 312 (519)
Q Consensus 291 ~~g~~~~~---------------------------------------------------------~~~~~~~~~-d~~i~ 312 (519)
.++.+.++ .+++++++. ++.|+
T Consensus 391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQ 470 (615)
T ss_dssp TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEE
Confidence 66654332 346777888 99999
Q ss_pred EEeCCCCCce-EEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccC---
Q 010051 313 IYDTESVPPI-AILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKS--- 388 (519)
Q Consensus 313 vwd~~~~~~~-~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--- 388 (519)
+||+.+++.. ..+.. |...|++++|+|+|++|++++.||.|++||+.+++.... +.+ .+...+.+++|+|
T Consensus 471 ~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~--~~~---~h~~~v~~~~~sp~~~ 544 (615)
T 1pgu_A 471 VFKLSDLEVSFDLKTP-LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTS--RWA---FRTSKINAISWKPAEK 544 (615)
T ss_dssp EEETTEEEEEEECSSC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC--CSC---CCSSCEEEEEECCCC-
T ss_pred EEECCCccccccccCC-ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeE--eec---CCCCceeEEEEcCccc
Confidence 9999887655 45555 899999999999999999999999999999988754322 222 1346899999999
Q ss_pred -------CccEEEeecCCcee-eecCCCCCcccccc-----------ccCCCceEEeccccceeeeecc
Q 010051 389 -------EDMIIEASTNDKLV-TAETKEPDKRKTEA-----------ETKDDETAINGSIAAESRLIEP 438 (519)
Q Consensus 389 -------~~~~l~~~~~d~~i-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 438 (519)
++.+|++++.|+.+ +|+........... ..++.. +++++.++..++|+.
T Consensus 545 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 545 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp -----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred cccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 99999999988777 77766532111111 112333 666677777777754
No 46
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.6e-38 Score=294.35 Aligned_cols=311 Identities=15% Similarity=0.200 Sum_probs=236.6
Q ss_pred EEecCCCCCEEEEEEecC----CCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------
Q 010051 7 QINWHDTKPVLTLDFHPI----SGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC------- 75 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~----~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------- 75 (519)
.+..+|.++|++++|+|+ ..++++++.++.|+|||+.+++.+..+... ....|...|.+++|+|+
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~ 87 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSY----VDADADENFYTCAWTYDSNTSHPL 87 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEE----ECSCTTCCEEEEEEEECTTTCCEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeec----cccCCCCcEEEEEeccCCCCCCCE
Confidence 455689999999999994 446666666779999999988766544321 12236678999999887
Q ss_pred ------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceEEEe---cccc
Q 010051 76 ------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST-DGAFLLSGSVDNSCIIWDVNKGSVLQIL---DAHF 145 (519)
Q Consensus 76 ------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~h~ 145 (519)
++.|++||+.++ +.+..+.+|...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+ ..|.
T Consensus 88 l~~~~~dg~i~v~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITM------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp EEEEETTCEEEEECTTTC------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS
T ss_pred EEEecCCCEEEEEEchhc------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc
Confidence 488999999876 56777888999999999999 8999999999999999999999988888 7899
Q ss_pred cCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCc-cccceeeecCCCcceeeEE
Q 010051 146 HYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSK-SAKNHLFHDETLPSFFRRL 224 (519)
Q Consensus 146 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~ 224 (519)
..|.+++|+|++++|++++.||.|++||++..+......... .+............ ...........+...|.++
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 237 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY----DYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 237 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHH----TCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEE
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeE----EecCCCCcccccceeeccCccccccCCcceEEEE
Confidence 999999999999999999999999999998764322111000 00000000000000 0001112223467889999
Q ss_pred EEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcc-------------cccCCCCCCCeEEEEEcCC--ccccccc
Q 010051 225 AWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRP-------------ALQLPGASKPVVAVRFCPL--AFNLRES 289 (519)
Q Consensus 225 ~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~-------------~~~~~~~~~~v~~~~~sp~--~~~l~~~ 289 (519)
+|+ +.++++++.+ +.+++||+...... ...+..|...|++++|+|+ +
T Consensus 238 ~~~--~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~------ 299 (366)
T 3k26_A 238 RWL--GDLILSKSCE----------NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ------ 299 (366)
T ss_dssp EEE--TTEEEEECSS----------SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS------
T ss_pred EEc--CCEEEEEecC----------CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC------
Confidence 999 7788888776 69999998765432 3345567777888888888 6
Q ss_pred CCCCcccccceEEEEEecCCeEEEEeCCCCCce----EEEeccc--cccEEEEEEcCCCCEEEEEeCCCcEEEEEec
Q 010051 290 NSAGFFKLPYRLIFAIATLNSLYIYDTESVPPI----AILAGLH--YAAITDIAWSNNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 290 ~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~----~~~~~~~--~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~ 360 (519)
+++++++.||.|++||+.+++.. ..+.. | ...|++++|+|++++|++++.||.|++||+.
T Consensus 300 ----------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 300 ----------KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH-HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ----------SEEEEECTTSCEEEEECCSSSGGGCEEEEECC-TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ----------cEEEEEecCCcEEEEECCCCCCccccceEEcc-cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 67888888999999999987643 36666 6 7899999999999999999999999999985
No 47
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=291.56 Aligned_cols=284 Identities=16% Similarity=0.210 Sum_probs=228.5
Q ss_pred EecCCCCCEEEEEEecCCCEE-EEEcC---CCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 8 INWHDTKPVLTLDFHPISGLL-ATGGA---DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 8 ~~~~h~~~V~~~~~sp~~~~l-a~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
++.+|.+.|++++|+|++..| ++|+. |+.|+|||+.+++..... ...|...|.+++|+|+
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLR--------EIEKAKPIKCGTFGATSLQQRYLA 84 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEE--------EEEESSCEEEEECTTCCTTTCCEE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccccee--------eecccCcEEEEEEcCCCCCCceEE
Confidence 446799999999999999655 56665 899999999988754321 2358889999999986
Q ss_pred ----CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEE------cCCCCEEEEEeCCCeEEEEEcCCCc-eEEEeccc
Q 010051 76 ----GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQW------STDGAFLLSGSVDNSCIIWDVNKGS-VLQILDAH 144 (519)
Q Consensus 76 ----~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~h 144 (519)
++.|++||+..+. ..+..+.+|...|.+++| +|++++|++++.||.|++||+.++. .+..+..|
T Consensus 85 ~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEAPE-----MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp EEETTSCEEEECTTSCS-----SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred EecCCCeEEEEeCCCCC-----ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 4789999998763 256677789999999954 6899999999999999999999887 67777665
Q ss_pred cc----CeEEEE----EcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCC
Q 010051 145 FH----YVQGVA----WDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDET 216 (519)
Q Consensus 145 ~~----~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (519)
.+ .+.+++ |+|++++|++++.||.|++||++..+.. ....
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--------------------------------~~~~ 207 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR--------------------------------WETN 207 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE--------------------------------EEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee--------------------------------eecC
Confidence 54 788988 6789999999999999999999876421 1113
Q ss_pred CcceeeEEEEcc---CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccC-----CCCCCCeEEEEEcCCcccccc
Q 010051 217 LPSFFRRLAWSP---DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQL-----PGASKPVVAVRFCPLAFNLRE 288 (519)
Q Consensus 217 ~~~~i~~~~~sp---~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~ 288 (519)
+...|.+++|+| ++.++++++.+ +.+++||++... ....+ .+|...|++++|+|++.
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~---- 272 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLE----------GKFHVFDMRTQH-PTKGFASVSEKAHKSTVWQVRHLPQNR---- 272 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEEST----------TEEEEEEEEEEE-TTTEEEEEEEECCSSCEEEEEEETTEE----
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCC----------CeEEEEeCcCCC-cccceeeeccCCCcCCEEEEEECCCCC----
Confidence 456789999999 99999998877 689999987543 23333 38999999999999883
Q ss_pred cCCCCcccccceEEEEEecCCeEEEEeCCCC-------------------CceEEEeccccccEEEEEEcCCCCEEE-EE
Q 010051 289 SNSAGFFKLPYRLIFAIATLNSLYIYDTESV-------------------PPIAILAGLHYAAITDIAWSNNARYLA-LS 348 (519)
Q Consensus 289 ~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~-------------------~~~~~~~~~~~~~i~~~~~s~~g~~l~-~~ 348 (519)
.++++++.||.|++||+..+ +.+..+.+ |...|++++|+|++++|+ ++
T Consensus 273 -----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 273 -----------ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-STQPISSLDWSPDKRGLCVCS 340 (357)
T ss_dssp -----------EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-CSSCEEEEEECSSSTTEEEEE
T ss_pred -----------cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc-CCCCeeEEEEcCCCCeEEEEe
Confidence 16889999999999998754 34566777 999999999999999998 89
Q ss_pred eCCCcEEEEEecCCc
Q 010051 349 SQDGYCTLVEFENDE 363 (519)
Q Consensus 349 ~~dg~i~vwd~~~~~ 363 (519)
+.||.|++|++.+.+
T Consensus 341 ~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 341 SFDQTVRVLIVTKLN 355 (357)
T ss_dssp ETTSEEEEEEECC--
T ss_pred cCCCcEEEEECCCcc
Confidence 999999999997653
No 48
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.9e-37 Score=285.37 Aligned_cols=278 Identities=15% Similarity=0.209 Sum_probs=232.3
Q ss_pred cccccccCcceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeE
Q 010051 57 QNSLSYHGSAINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSC 127 (519)
Q Consensus 57 ~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 127 (519)
...+.+|...|++++|+|+ |+.|+|||..+. .....+..|...|.+++|+|+|.+|++|+.|+.+
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~------~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT------NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC------CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC------CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 4457889999999999998 589999998776 4556667788999999999999999999999999
Q ss_pred EEEEcCCC------ceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccc
Q 010051 128 IIWDVNKG------SVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHST 201 (519)
Q Consensus 128 ~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (519)
++|++... .....+..|...|.++.|+|++..|++++.|++|++||+.+++..
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~--------------------- 189 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL--------------------- 189 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE---------------------
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE---------------------
Confidence 99998653 345667789999999999999999999999999999999876521
Q ss_pred cCCccccceeeecCCCcceeeEEEEcc--CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEE
Q 010051 202 DDSKSAKNHLFHDETLPSFFRRLAWSP--DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRF 279 (519)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~i~~~~~sp--~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~ 279 (519)
.....|...|.+++|+| +|.+|++++.+ +.+++||++.. .+...+.+|...|++++|
T Consensus 190 ----------~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D----------g~v~~wd~~~~-~~~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 190 ----------QSFHGHGADVLCLDLAPSETGNTFVSGGCD----------KKAMVWDMRSG-QCVQAFETHESDVNSVRY 248 (354)
T ss_dssp ----------EEEECCSSCEEEEEECCCSSCCEEEEEETT----------SCEEEEETTTC-CEEEEECCCSSCEEEEEE
T ss_pred ----------EEEcCCCCCeEEEEEEeCCCCCEEEEEeCC----------CeEEEEECCCC-cEEEEecCCCCCeEEEEE
Confidence 11123556788899987 57899998877 79999999764 456678899999999999
Q ss_pred cCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec-cccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010051 280 CPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG-LHYAAITDIAWSNNARYLALSSQDGYCTLVE 358 (519)
Q Consensus 280 sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd 358 (519)
+|++ .++++++.|+.|++||++.++.+..+.. .+...+++++|+|+|++|++++.|+.|++||
T Consensus 249 ~p~~----------------~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 249 YPSG----------------DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp CTTS----------------SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eCCC----------------CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEE
Confidence 9998 6688999999999999998887776654 1235789999999999999999999999999
Q ss_pred ecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-ee
Q 010051 359 FENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TA 404 (519)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~ 404 (519)
+.++... ..+.+|. ..+.+++|+|+|.+|++++.|+.+ +|
T Consensus 313 ~~~~~~~--~~l~~h~----~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 313 VLKGSRV--SILFGHE----NRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp TTTCSEE--EEECCCS----SCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCCCceE--EEEECCC----CcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 9877532 3344443 689999999999999999999887 55
No 49
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.3e-37 Score=293.99 Aligned_cols=310 Identities=12% Similarity=0.151 Sum_probs=241.9
Q ss_pred eEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 6 LQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
.+.+.+|.+.|++++|+| ++||+|+.||.|+|||+.+++.....
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~---------------------------------- 52 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPK---------------------------------- 52 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGG----------------------------------
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCC----------------------------------
Confidence 455678999999999998 89999999999999999876532110
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCC----C---CEEEEEeCCCeEEEEEcCCCce-----EEEeccc-----ccCe
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTD----G---AFLLSGSVDNSCIIWDVNKGSV-----LQILDAH-----FHYV 148 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~---~~l~~~~~dg~i~vwd~~~~~~-----~~~~~~h-----~~~v 148 (519)
.....+.+|...|++++|+|+ + ++|++++.||.|++||+.+++. +..+..| ...|
T Consensus 53 --------~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v 124 (397)
T 1sq9_A 53 --------DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF 124 (397)
T ss_dssp --------GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCE
T ss_pred --------CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcE
Confidence 234445568999999999999 9 9999999999999999999887 8888888 5899
Q ss_pred EEEEEc----CCCCe-EEEeeCCCeEEEEecCC------CCccccccccceeeEEEeccCcccccCCccccceeeecCCC
Q 010051 149 QGVAWD----PLSKY-VASLSSDRTCRIYANRP------TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETL 217 (519)
Q Consensus 149 ~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (519)
.+++|+ |++++ |++++.||.|++||+.. .+... +.....+.. .+.....+
T Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~--------------~~~~~~~~ 185 (397)
T 1sq9_A 125 WALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN-----WSPTLELQG--------------TVESPMTP 185 (397)
T ss_dssp EEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC-----CCCEEEEEE--------------EECCSSSS
T ss_pred EEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee-----ccCcceeee--------------eeccccCC
Confidence 999999 99999 99999999999999987 33211 000000000 00011345
Q ss_pred cceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCC---C---CCCeEEEEEcCCcccccccCC
Q 010051 218 PSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPG---A---SKPVVAVRFCPLAFNLRESNS 291 (519)
Q Consensus 218 ~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~---~---~~~v~~~~~sp~~~~l~~~~~ 291 (519)
...|.+++|+|++ ++++++.+ +.+++||+... .....+.. | ...|.+++|+|++
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~d----------g~i~i~d~~~~-~~~~~~~~~~~h~~~~~~i~~i~~~~~~-------- 245 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNN----------GTVQISELSTL-RPLYNFESQHSMINNSNSIRSVKFSPQG-------- 245 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTT----------SEEEEEETTTT-EEEEEEECCC---CCCCCEEEEEECSST--------
T ss_pred CCCceEEEECCCc-eEEEEeCC----------CcEEEEECCCC-ceeEEEeccccccccCCccceEEECCCC--------
Confidence 6778999999999 88888776 69999999754 45556666 8 8999999999988
Q ss_pred CCcccccceEEEEEecC---CeEEEEeCCCCCceEEEecc------------ccccEEEEEEcCCCCEEEEEeCCCcEEE
Q 010051 292 AGFFKLPYRLIFAIATL---NSLYIYDTESVPPIAILAGL------------HYAAITDIAWSNNARYLALSSQDGYCTL 356 (519)
Q Consensus 292 ~g~~~~~~~~~~~~~~d---~~i~vwd~~~~~~~~~~~~~------------~~~~i~~~~~s~~g~~l~~~~~dg~i~v 356 (519)
.++++++.| +.|++||+.+++.+..+... |...|++++|+|++++|++++.||.|++
T Consensus 246 --------~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 246 --------SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 317 (397)
T ss_dssp --------TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred --------CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 568888888 99999999999988888752 7889999999999999999999999999
Q ss_pred EEecCCcccceeeec----CC-----------cccccCCCCcccccCCc----------cEEEeecCCcee-eecC
Q 010051 357 VEFENDELGIPISLS----GN-----------KVSKDENKSPLVTKSED----------MIIEASTNDKLV-TAET 406 (519)
Q Consensus 357 wd~~~~~~~~~~~~~----~~-----------~~~~~~~~~~~~~s~~~----------~~l~~~~~d~~i-~~~~ 406 (519)
||+.+++....+... ++ ...+...+.+++|+|++ .+|++++.|+.+ +|+.
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 999988655444421 22 00115789999999998 788998888777 6654
No 50
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-36 Score=289.94 Aligned_cols=312 Identities=16% Similarity=0.230 Sum_probs=258.7
Q ss_pred eeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------CC
Q 010051 5 TLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------GG 77 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~ 77 (519)
..+.+.+|.+.|.. ++++++++|++|+.||.|+|||+.+++.... +.+|...|.+++|+++ |+
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~---------~~~h~~~v~~~~~~~~~l~s~~~dg 179 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT---------LVGHTGGVWSSQMRDNIIISGSTDR 179 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEE---------CCCCSSCEEEEEEETTEEEEEETTS
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEE---------EcCCCCCEEEEEecCCEEEEEeCCC
Confidence 45677889887643 3555699999999999999999998876543 5578999999988765 79
Q ss_pred eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCC
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLS 157 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 157 (519)
.|++||+.++ +.+..+.+|...|.+++|+ ++.|++|+.||.|++||+.+++.+..+.+|...|.++.| ++
T Consensus 180 ~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~ 249 (445)
T 2ovr_B 180 TLKVWNAETG------ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG 249 (445)
T ss_dssp CEEEEETTTT------EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CS
T ss_pred eEEEEECCcC------cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CC
Confidence 9999999887 6778888999999999996 678999999999999999999999999999999999999 68
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
++|++++.||.|++||+++++. +.....+...|.++.| ++.++++++
T Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~-------------------------------~~~~~~~~~~v~~~~~--~~~~l~~~~ 296 (445)
T 2ovr_B 250 RRVVSGAYDFMVKVWDPETETC-------------------------------LHTLQGHTNRVYSLQF--DGIHVVSGS 296 (445)
T ss_dssp SCEEEEETTSCEEEEEGGGTEE-------------------------------EEEECCCSSCEEEEEE--CSSEEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCcE-------------------------------eEEecCCCCceEEEEE--CCCEEEEEe
Confidence 8999999999999999876531 1112245567888888 889999988
Q ss_pred CCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC
Q 010051 238 GSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE 317 (519)
Q Consensus 238 ~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~ 317 (519)
.+ +.+++||+... .....+.+|...+.++.+++ +++++++.||.|++||+.
T Consensus 297 ~d----------~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~------------------~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 297 LD----------TSIRVWDVETG-NCIHTLTGHQSLTSGMELKD------------------NILVSGNADSTVKIWDIK 347 (445)
T ss_dssp TT----------SCEEEEETTTC-CEEEEECCCCSCEEEEEEET------------------TEEEEEETTSCEEEEETT
T ss_pred CC----------CeEEEEECCCC-CEEEEEcCCcccEEEEEEeC------------------CEEEEEeCCCeEEEEECC
Confidence 77 69999999764 45667788999999888854 568999999999999999
Q ss_pred CCCceEEEec--cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEe
Q 010051 318 SVPPIAILAG--LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEA 395 (519)
Q Consensus 318 ~~~~~~~~~~--~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 395 (519)
+++.+..+.. .|...|++++|+ +++|++++.||.|++||+.+++....+.... .......+.+++|+|++.++++
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~la~ 424 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLE-SGGSGGVVWRIRASNTKLVCAV 424 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECT-TGGGTCEEEEEEECSSEEEEEE
T ss_pred CCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccc-cCCCCceEEEEEecCCEEEEEE
Confidence 9999888875 277889999995 6799999999999999999886554442211 1123567899999999999999
Q ss_pred ecCCce
Q 010051 396 STNDKL 401 (519)
Q Consensus 396 ~~~d~~ 401 (519)
++.|+.
T Consensus 425 ~~~dg~ 430 (445)
T 2ovr_B 425 GSRNGT 430 (445)
T ss_dssp ECSSSS
T ss_pred cccCCC
Confidence 999884
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-36 Score=276.88 Aligned_cols=281 Identities=23% Similarity=0.337 Sum_probs=233.0
Q ss_pred ccccccccCcceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCe
Q 010051 56 YQNSLSYHGSAINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNS 126 (519)
Q Consensus 56 ~~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 126 (519)
....+.+|...|.+++|+|+ ++.|++|++..+ +....+.+|...|.+++|+|++++|++|+.|+.
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 88 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------KFEKTISGHKLGISDVAWSSDSNLLVSASDDKT 88 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc------ccchhhccCCCceEEEEEcCCCCEEEEECCCCE
Confidence 34557789999999999998 588999999876 566778889999999999999999999999999
Q ss_pred EEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCcc
Q 010051 127 CIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKS 206 (519)
Q Consensus 127 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (519)
|++||+.+++.+..+.+|...|.++.|+|++++|++++.||.|++||+++++..
T Consensus 89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-------------------------- 142 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-------------------------- 142 (312)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE--------------------------
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE--------------------------
Confidence 999999999999999999999999999999999999999999999999876421
Q ss_pred ccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccc
Q 010051 207 AKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNL 286 (519)
Q Consensus 207 ~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 286 (519)
.....+...|.+++|+|+++++++++.+ +.+++||+............+...+..++|+|++
T Consensus 143 -----~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 204 (312)
T 4ery_A 143 -----KTLPAHSDPVSAVHFNRDGSLIVSSSYD----------GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG--- 204 (312)
T ss_dssp -----EEECCCSSCEEEEEECTTSSEEEEEETT----------SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS---
T ss_pred -----EEecCCCCcEEEEEEcCCCCEEEEEeCC----------CcEEEEECCCCceeeEEeccCCCceEEEEECCCC---
Confidence 1112345678999999999999998877 6899999986544444455677789999999998
Q ss_pred cccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEE---EEEEcCCCCEEEEEeCCCcEEEEEecCCc
Q 010051 287 RESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAIT---DIAWSNNARYLALSSQDGYCTLVEFENDE 363 (519)
Q Consensus 287 ~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~---~~~~s~~g~~l~~~~~dg~i~vwd~~~~~ 363 (519)
+++++++.|+.|++||+.+++.+..+.+ |...+. .....+++.+|++|+.||.|++||+.+++
T Consensus 205 -------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 205 -------------KYILAATLDNTLKLWDYSKGKCLKTYTG-HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp -------------SEEEEEETTTEEEEEETTTTEEEEEECS-SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred -------------CEEEEEcCCCeEEEEECCCCcEEEEEEe-cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 6688889999999999999999988887 665432 23344678999999999999999998875
Q ss_pred ccceeeecCCcccccCCCCcccccCCccEEEeec--CCcee-eecC
Q 010051 364 LGIPISLSGNKVSKDENKSPLVTKSEDMIIEAST--NDKLV-TAET 406 (519)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~--~d~~i-~~~~ 406 (519)
... .+.+|. ..+.+++|+|++.++++++ .|+.+ +|..
T Consensus 271 ~~~--~~~~h~----~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 271 IVQ--KLQGHT----DVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEE--EECCCS----SCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred hhh--hhhccC----CcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 433 334443 5788999999999999886 45555 6653
No 52
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-37 Score=283.56 Aligned_cols=258 Identities=19% Similarity=0.242 Sum_probs=202.2
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
.++.+|.+.|++++|+|+|++||+|+.|++|+|||+.++..
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~--------------------------------------- 47 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ--------------------------------------- 47 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE---------------------------------------
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc---------------------------------------
Confidence 34568999999999999999999999999999999876531
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCc--eEEEecccccCeEEEEEcCC--CCeE
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWST--DGAFLLSGSVDNSCIIWDVNKGS--VLQILDAHFHYVQGVAWDPL--SKYV 160 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l 160 (519)
..+..+.+|...|++++|++ ++++|++|+.|++|++||++++. ....+.+|...|.+++|+|+ +.+|
T Consensus 48 -------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~l 120 (316)
T 3bg1_A 48 -------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLIL 120 (316)
T ss_dssp -------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCE
T ss_pred -------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEE
Confidence 12344567999999999986 48999999999999999998874 56678899999999999998 7899
Q ss_pred EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC-----------
Q 010051 161 ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD----------- 229 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~----------- 229 (519)
++++.|+.|++||++....... ......+...+.+++|+|+
T Consensus 121 asgs~D~~i~lwd~~~~~~~~~----------------------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3bg1_A 121 ACGSSDGAISLLTYTGEGQWEV----------------------------KKINNAHTIGCNAVSWAPAVVPGSLIDHPS 172 (316)
T ss_dssp EEECSSSCEEEEEECSSSCEEE----------------------------CCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred EEEcCCCCEEEEecCCCCCcce----------------------------eeeeccccCCcceEEEccccCCcccccccc
Confidence 9999999999999976421000 0111234556778889887
Q ss_pred ------CCeEEEecCCcceeeeecccceEEEEeccCCC--cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceE
Q 010051 230 ------GSFLLVPAGSYKISSMSESINSAYIFSRKDLS--RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRL 301 (519)
Q Consensus 230 ------g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~ 301 (519)
+++|++++.+ +.|++||+.... .+...+.+|...|.+++|+|++.. + ..+
T Consensus 173 ~~~~~~~~~l~sgs~D----------~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~------~------~~~ 230 (316)
T 3bg1_A 173 GQKPNYIKRFASGGCD----------NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGL------P------TST 230 (316)
T ss_dssp SCCCCCCCBEECCBTT----------SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSC------S------CCE
T ss_pred ccCccccceEEEecCC----------CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCC------C------Cce
Confidence 4677777666 689999986432 345678899999999999998621 1 156
Q ss_pred EEEEecCCeEEEEeCCCC---C-ceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 302 IFAIATLNSLYIYDTESV---P-PIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 302 ~~~~~~d~~i~vwd~~~~---~-~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
|++++.|++|++|++.+. . ....+.. |...|.+++|+|+|++||+++.||.|++|+...
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~-~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHK-FNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEEEE-CSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhhhc-CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 899999999999998763 1 2234555 889999999999999999999999999999863
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=277.52 Aligned_cols=285 Identities=15% Similarity=0.136 Sum_probs=237.8
Q ss_pred CeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 4 GTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 4 ~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
..++.+.+|.+.|++++| |++++||+|+.||.|+|||+.+++.... +..|...|.+++|+|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTV---------VYTGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEE---------EEECSSCEEEEEEETTTTEEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEE---------eecCCccEEEEEECCCCCEEEEec
Confidence 355677899999999999 9999999999999999999988764433 4568899999999998
Q ss_pred -CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEc
Q 010051 76 -GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWD 154 (519)
Q Consensus 76 -~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 154 (519)
++.|++|++...... +....+.+|...|.+++| ++++|++++.|+.|++|| .++....+..|...+.++.|+
T Consensus 79 ~dg~i~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 79 KDTMINGVPLFATSGE---DPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp TTSCEEEEETTCCTTS---CC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEE
T ss_pred CCCeEEEEEeeecCCC---CcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEc
Confidence 478899999765433 455667789999999999 578999999999999999 777888889999999999998
Q ss_pred C-CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeE
Q 010051 155 P-LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFL 233 (519)
Q Consensus 155 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l 233 (519)
| ++++|++++.||.|++||..... . .....+...+.+++|+|++. +
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d~~~~~------------~--------------------~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQNDKVI------------K--------------------TFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEETTEEE------------E--------------------EECSSCSSCEEEEEEEETTE-E
T ss_pred cCCCCEEEEEECCCCEEEEecCceE------------E--------------------EEeccCcccEEEEEEcCCCe-E
Confidence 8 89999999999999999933210 0 11112567789999999999 7
Q ss_pred EEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEE
Q 010051 234 LVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYI 313 (519)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~v 313 (519)
++++.+ +.+++||+... ..+..+.+|...|++++|+|++ .+++++.|+.|++
T Consensus 199 ~~~~~d----------g~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~-----------------~l~~~~~dg~v~i 250 (313)
T 3odt_A 199 ISCSND----------GLIKLVDMHTG-DVLRTYEGHESFVYCIKLLPNG-----------------DIVSCGEDRTVRI 250 (313)
T ss_dssp EEEETT----------SEEEEEETTTC-CEEEEEECCSSCEEEEEECTTS-----------------CEEEEETTSEEEE
T ss_pred EEccCC----------CeEEEEECCch-hhhhhhhcCCceEEEEEEecCC-----------------CEEEEecCCEEEE
Confidence 776666 69999999754 5566777899999999999986 2678888999999
Q ss_pred EeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccccee
Q 010051 314 YDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPI 368 (519)
Q Consensus 314 wd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~ 368 (519)
||+.+++.+..+.. |...|++++|+|+++ |++++.||.|++|++.+++.....
T Consensus 251 wd~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 251 WSKENGSLKQVITL-PAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp ECTTTCCEEEEEEC-SSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred EECCCCceeEEEec-cCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 99999999999988 899999999999998 567899999999999887654443
No 54
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5e-37 Score=277.89 Aligned_cols=253 Identities=13% Similarity=0.181 Sum_probs=217.3
Q ss_pred eeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEe
Q 010051 94 KVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYA 173 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 173 (519)
.....+.+|...|++++|+|++++|++|+.||.|++||+.++..+..+..|...|.+++|+|++++|++++.|+.|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 45567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEE
Q 010051 174 NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAY 253 (519)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~ 253 (519)
+.+++. +.....|...|.+++|+|++++|++++.+ +.|+
T Consensus 84 ~~~~~~-------------------------------~~~~~~h~~~v~~~~~~~~~~~l~sgs~D----------~~v~ 122 (304)
T 2ynn_A 84 YNTGEK-------------------------------VVDFEAHPDYIRSIAVHPTKPYVLSGSDD----------LTVK 122 (304)
T ss_dssp TTTCCE-------------------------------EEEEECCSSCEEEEEECSSSSEEEEEETT----------SCEE
T ss_pred CCCCcE-------------------------------EEEEeCCCCcEEEEEEcCCCCEEEEECCC----------CeEE
Confidence 987642 11223467789999999999999998887 7999
Q ss_pred EEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccE
Q 010051 254 IFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAI 333 (519)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i 333 (519)
+||+.........+.+|...|.+++|+|.+. ..+++++.|+.|++||+.++.....+...|...+
T Consensus 123 lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~---------------~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v 187 (304)
T 2ynn_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDP---------------STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (304)
T ss_dssp EEEGGGTTEEEEEECCCCSCEEEEEECTTCT---------------TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCE
T ss_pred EEECCCCcchhhhhcccCCcEEEEEECCCCC---------------CEEEEEeCCCeEEEEECCCCCccceeccCCcCcE
Confidence 9999876566677889999999999999431 5688999999999999998887777766477889
Q ss_pred EEEEEcC--CCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCC
Q 010051 334 TDIAWSN--NARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 334 ~~~~~s~--~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~ 408 (519)
..+.|+| ++++|++++.|+.|++||+.+++.. ..+.+|. ..+..++|+|++.+|++++.|+.+ +|+...
T Consensus 188 ~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~--~~~~~h~----~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV--ATLEGHM----SNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE--EEEECCS----SCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc--eeeCCCC----CCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999987 7789999999999999999887543 3444544 578899999999999999999887 777554
No 55
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-36 Score=285.98 Aligned_cols=273 Identities=18% Similarity=0.260 Sum_probs=219.7
Q ss_pred ccCcceeEEEEccCC--------CeEEEEEcccCCCcccceeeeccccC------------------CCCeEEEEEcCCC
Q 010051 62 YHGSAINILRFSPCG--------GELIIWKLHTTETGQAWKVLKNLSFH------------------RKDVLDLQWSTDG 115 (519)
Q Consensus 62 ~~~~~v~~~~~~~~~--------~~i~vw~~~~~~~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~ 115 (519)
.|...|.+++|+|++ +.+++|++.++ ..+..+..| ...|++++|+|+|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg 135 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDG------SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 135 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTC------CEEEEECC-----------------CCCCBEEEEEECTTS
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCC------CEEEEecCccccccccccccccccCCCceeEEEEEECCCC
Confidence 599999999999985 57889999876 333333322 2349999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEec
Q 010051 116 AFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITK 195 (519)
Q Consensus 116 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 195 (519)
++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++.. ..+
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~----------~~~-- 203 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS----------LTL-- 203 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----------EEE--
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE----------EEE--
Confidence 99999999999999999999999999999999999999999999999999999999999876421 111
Q ss_pred cCcccccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEecCCcceeeeecccceEEEEeccCCCccccc-------C
Q 010051 196 AGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQ-------L 267 (519)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~-------~ 267 (519)
.+...+.+++|+| +++++++++.+ +.+++||..... .... .
T Consensus 204 --------------------~~~~~v~~~~~~~~~~~~l~~~s~d----------~~v~iwd~~~~~-~~~~~~~~~~~~ 252 (393)
T 1erj_A 204 --------------------SIEDGVTTVAVSPGDGKYIAAGSLD----------RAVRVWDSETGF-LVERLDSENESG 252 (393)
T ss_dssp --------------------ECSSCEEEEEECSTTCCEEEEEETT----------SCEEEEETTTCC-EEEEEC------
T ss_pred --------------------EcCCCcEEEEEECCCCCEEEEEcCC----------CcEEEEECCCCc-EEEeecccccCC
Confidence 1234578999999 89999998877 689999987543 2222 2
Q ss_pred CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCC------------CceEEEeccccccEEE
Q 010051 268 PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV------------PPIAILAGLHYAAITD 335 (519)
Q Consensus 268 ~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~------------~~~~~~~~~~~~~i~~ 335 (519)
.+|...|.+++|+|++ +++++++.|+.|++||+.+. .+...+.+ |...|.+
T Consensus 253 ~~h~~~v~~v~~~~~g----------------~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~ 315 (393)
T 1erj_A 253 TGHKDSVYSVVFTRDG----------------QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG-HKDFVLS 315 (393)
T ss_dssp CCCSSCEEEEEECTTS----------------SEEEEEETTSEEEEEEC---------------CEEEEEEC-CSSCEEE
T ss_pred CCCCCCEEEEEECCCC----------------CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEec-ccCcEEE
Confidence 5789999999999998 66889999999999999753 34556777 9999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccC------CccEEEeecCCcee-eecC
Q 010051 336 IAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKS------EDMIIEASTNDKLV-TAET 406 (519)
Q Consensus 336 ~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~------~~~~l~~~~~d~~i-~~~~ 406 (519)
++|+|++++|++++.||.|++||+.+++.. ..+.+|. ..+.+++|++ ++.+|++++.|+.+ +|+.
T Consensus 316 ~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~--~~l~~h~----~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 316 VATTQNDEYILSGSKDRGVLFWDKKSGNPL--LMLQGHR----NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTCCEE--EEEECCS----SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCeEE--EEECCCC----CCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 999999999999999999999999887543 3444554 4667777654 78999999998877 6653
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-38 Score=295.58 Aligned_cols=252 Identities=17% Similarity=0.173 Sum_probs=199.6
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
.++..|.++|++++|+|++++||+|+.|+.|+|||+.++..
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~--------------------------------------- 45 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW--------------------------------------- 45 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE---------------------------------------
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce---------------------------------------
Confidence 34445678999999999999999999999999999986521
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---eEEEecccccCeEEEEEcCCCCeEEEe
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS---VLQILDAHFHYVQGVAWDPLSKYVASL 163 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~~~ 163 (519)
+....+.+|...|++++|+|++++|++++.|+.|++||+.++. ....+..|...|.+++|+|++++|+++
T Consensus 46 -------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 118 (377)
T 3dwl_C 46 -------KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG 118 (377)
T ss_dssp -------EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEE
T ss_pred -------EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEE
Confidence 2344456689999999999999999999999999999999887 667788899999999999999999999
Q ss_pred eCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecC-CCcceeeEEEEccCCCeEEEecCCcce
Q 010051 164 SSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDE-TLPSFFRRLAWSPDGSFLLVPAGSYKI 242 (519)
Q Consensus 164 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~~~~~~~~~ 242 (519)
+.|+.|++||++..+.... ..... .+...|.+++|+|++++|++++.+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~----------------------------~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--- 167 (377)
T 3dwl_C 119 SGARVISVCYFEQENDWWV----------------------------SKHLKRPLRSTILSLDWHPNNVLLAAGCAD--- 167 (377)
T ss_dssp ESSSCEEECCC-----CCC----------------------------CEEECSSCCSCEEEEEECTTSSEEEEEESS---
T ss_pred ecCCeEEEEEECCccccee----------------------------eeEeecccCCCeEEEEEcCCCCEEEEEeCC---
Confidence 9999999999987642100 00111 256789999999999999998877
Q ss_pred eeeecccceEEEEeccCC-----------------CcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE
Q 010051 243 SSMSESINSAYIFSRKDL-----------------SRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 243 ~~~~~~~~~i~i~~~~~~-----------------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
+.+++||+... ......+ +|...|.+++|+|++ ++++++
T Consensus 168 -------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~----------------~~l~~~ 223 (377)
T 3dwl_C 168 -------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG----------------NALAYA 223 (377)
T ss_dssp -------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS----------------SCEEEE
T ss_pred -------CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC----------------CEEEEE
Confidence 68999998521 2334445 899999999999998 567888
Q ss_pred ecCCeEEEEeCCCCCc----eEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 306 ATLNSLYIYDTESVPP----IAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 306 ~~d~~i~vwd~~~~~~----~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
+.|+.|++||+.+++. +..+.+ |...|++++|+|++++|++++.++.+ +|+...
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKL-SQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEEC-SSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred eCCCcEEEEECCCCCCcceeeEeecC-CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 8999999999999987 778888 99999999999999999998765555 777653
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.4e-36 Score=291.20 Aligned_cols=313 Identities=16% Similarity=0.162 Sum_probs=253.9
Q ss_pred eeEEecCCCCCE-EEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 5 TLQINWHDTKPV-LTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 5 ~~~~~~~h~~~V-~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
....+.+|...| .++.| ++++|++|+.||.|+|||+.+++.... +.+|...|.+++|+++
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~---------~~~h~~~V~~l~~~~~~~l~s~s~ 181 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQ---------LSGHDGGVWALKYAHGGILVSGST 181 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEE---------ECCCSSCEEEEEECSTTEEEEEET
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEE---------EeCCCcCEEEEEEcCCCEEEEEeC
Confidence 345667888875 66555 578999999999999999998875543 5679999999999887
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEc--CCCCEEEEEeCCCeEEEEEcCCCce----------------
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWS--TDGAFLLSGSVDNSCIIWDVNKGSV---------------- 137 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~vwd~~~~~~---------------- 137 (519)
|+.|++||+.++ +.+..+.+|...|.+++|+ +++.+|++|+.|+.|++||+.++..
T Consensus 182 dg~i~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 255 (464)
T 3v7d_B 182 DRTVRVWDIKKG------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 255 (464)
T ss_dssp TSCEEEEETTTT------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESC
T ss_pred CCCEEEEECCCC------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeec
Confidence 689999999877 6778888999999999998 5788999999999999999987652
Q ss_pred -------EEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccce
Q 010051 138 -------LQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNH 210 (519)
Q Consensus 138 -------~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (519)
+..+.+|...|.++ ++++++|++++.||.|++||+++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~------------------------------- 302 (464)
T 3v7d_B 256 PEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC------------------------------- 302 (464)
T ss_dssp GGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE-------------------------------
T ss_pred cCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE-------------------------------
Confidence 45677888888877 56789999999999999999987542
Q ss_pred eeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccC
Q 010051 211 LFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESN 290 (519)
Q Consensus 211 ~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 290 (519)
+.....+...|.+++|+|+++++++++.+ +.+++||+.+. .++..+.+|...|.++.|++
T Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~sg~~d----------g~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~--------- 362 (464)
T 3v7d_B 303 LYILSGHTDRIYSTIYDHERKRCISASMD----------TTIRIWDLENG-ELMYTLQGHTALVGLLRLSD--------- 362 (464)
T ss_dssp EEEECCCSSCEEEEEEETTTTEEEEEETT----------SCEEEEETTTT-EEEEEECCCSSCEEEEEECS---------
T ss_pred EEEecCCCCCEEEEEEcCCCCEEEEEeCC----------CcEEEEECCCC-cEEEEEeCCCCcEEEEEEcC---------
Confidence 11123456779999999999999998877 68999999754 56777889999999999985
Q ss_pred CCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeee
Q 010051 291 SAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISL 370 (519)
Q Consensus 291 ~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 370 (519)
.++++++.||.|++||+.++.....+. |...+..++|++++++|++++ ||.|++||+.+++......
T Consensus 363 ---------~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~- 429 (464)
T 3v7d_B 363 ---------KFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANI- 429 (464)
T ss_dssp ---------SEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCT-
T ss_pred ---------CEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhh-
Confidence 568999999999999999887766654 567788899999999999998 9999999999886543221
Q ss_pred cCCcccccCCCCcccccCCccEEEeecCCceeeec
Q 010051 371 SGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAE 405 (519)
Q Consensus 371 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~ 405 (519)
.. +...+.+++|+ +..+++++++++.+.+.
T Consensus 430 ~~----~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 430 LK----DADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TT----TCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred cc----CCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 12 24678899997 45666666677666443
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-38 Score=301.23 Aligned_cols=330 Identities=12% Similarity=0.076 Sum_probs=229.6
Q ss_pred eeEEecCCCCCEEEEEEecCC---------CEEEE-------------------EcCCCcEEEEEecCCccccccccccc
Q 010051 5 TLQINWHDTKPVLTLDFHPIS---------GLLAT-------------------GGADYDIKIWLINSGEKQKKIPTASY 56 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~sp~~---------~~la~-------------------~~~dg~i~iwd~~~~~~~~~~~~~~~ 56 (519)
+....+.+.+.|.+|+|+|++ ++||+ ++.|++|+||++.+++.... .
T Consensus 125 r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~-----~ 199 (524)
T 2j04_B 125 RRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV-----K 199 (524)
T ss_dssp SCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEE-----E
T ss_pred cceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCce-----E
Confidence 334445578899999999987 67766 44678999999987764211 1
Q ss_pred cccccccCcceeEEEEccC---------------CCeEEEEEcccCCCcc-----cceeeeccccCCCCeEEEEEcCCCC
Q 010051 57 QNSLSYHGSAINILRFSPC---------------GGELIIWKLHTTETGQ-----AWKVLKNLSFHRKDVLDLQWSTDGA 116 (519)
Q Consensus 57 ~~~~~~~~~~v~~~~~~~~---------------~~~i~vw~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~ 116 (519)
...+..|.+.|..++|+|+ |++|+|||+..+.... .......+.+|...|++++|++++
T Consensus 200 ~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~- 278 (524)
T 2j04_B 200 VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT- 278 (524)
T ss_dssp EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-
T ss_pred EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-
Confidence 1224557788999999885 5899999997653210 001234577899999999999864
Q ss_pred EEEEEeCCCeEEEEEcCCCc-eEEEecccccCeEEE--EEcCCC-CeEEEeeCCCeEEEEecCCCCccccccccceeeEE
Q 010051 117 FLLSGSVDNSCIIWDVNKGS-VLQILDAHFHYVQGV--AWDPLS-KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHV 192 (519)
Q Consensus 117 ~l~~~~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 192 (519)
.|++|+.||+|++||++++. ....+.+|...|.++ .|+|++ ++|++++.|++|++||+++.+....
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~---------- 348 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT---------- 348 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE----------
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc----------
Confidence 89999999999999998764 456688999999999 567887 8999999999999999986532110
Q ss_pred EeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCC
Q 010051 193 ITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASK 272 (519)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 272 (519)
+ ........|.+++|+|++..+++++.+ +.+++||++.. .....+.+|..
T Consensus 349 ~-------------------~~~~~~~~v~~v~fsp~~~~l~s~~~d----------~tv~lwd~~~~-~~~~~l~gH~~ 398 (524)
T 2j04_B 349 T-------------------VSRFRGSNLVPVVYCPQIYSYIYSDGA----------SSLRAVPSRAA-FAVHPLVSRET 398 (524)
T ss_dssp E-------------------EEECSCCSCCCEEEETTTTEEEEECSS----------SEEEEEETTCT-TCCEEEEECSS
T ss_pred c-------------------ccccccCcccceEeCCCcCeEEEeCCC----------CcEEEEECccc-ccceeeecCCC
Confidence 0 000001236789999999999988776 68999999764 34455678999
Q ss_pred CeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec----cccccEEEEEEcCCCCEEEEE
Q 010051 273 PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG----LHYAAITDIAWSNNARYLALS 348 (519)
Q Consensus 273 ~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~----~~~~~i~~~~~s~~g~~l~~~ 348 (519)
.|++++|+|+| +++++|+.|++|++||+... .+..+.. .+...|.+++|+|+|..+. .
T Consensus 399 ~V~sva~Sp~g----------------~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~ 460 (524)
T 2j04_B 399 TITAIGVSRLH----------------PMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-I 460 (524)
T ss_dssp CEEEEECCSSC----------------CBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-E
T ss_pred ceEEEEeCCCC----------------CeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-c
Confidence 99999999998 55788888999999998754 2222111 0122578999999998553 2
Q ss_pred eCCCcEEEEEec-CCcccceeeecCCcccccCCCCcccccCCc---cEEEeecCCcee-eecC
Q 010051 349 SQDGYCTLVEFE-NDELGIPISLSGNKVSKDENKSPLVTKSED---MIIEASTNDKLV-TAET 406 (519)
Q Consensus 349 ~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---~~l~~~~~d~~i-~~~~ 406 (519)
.. .+.+|+.. ++. ....+.+|. ..|.+++|+|++ .++++|+.++++ +|..
T Consensus 461 ~~--~~~~~~~~~~g~--~~~~l~gh~----~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 461 DS--SYEVYPLTVNDV--SKAKIDAHG----INITCTKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp CC--CCCCCC---------------CC----CSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred cC--CceecccccCCc--ceeeecCCC----ceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence 22 23343332 121 233344443 689999999996 499999998888 5553
No 59
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=277.52 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=193.5
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcc
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQ 91 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~ 91 (519)
|.+.|++++|+|++++||+|+.|++|+|||+....... .
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~-----------------------------------------~ 95 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT-----------------------------------------F 95 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC------------------------------------------------C
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc-----------------------------------------c
Confidence 99999999999999999999999999999986432100 0
Q ss_pred cceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC----CceEEEecccccCeEEEEEcCCCCeEEEeeCCC
Q 010051 92 AWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK----GSVLQILDAHFHYVQGVAWDPLSKYVASLSSDR 167 (519)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg 167 (519)
....+..+.+|...|++++|+|++++|++|+.|++|++||+.. .+++..+.+|...|.+++|+|++++|++++.|+
T Consensus 96 ~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 175 (330)
T 2hes_X 96 EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD 175 (330)
T ss_dssp CCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred cceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 0034556678999999999999999999999999999999943 245678899999999999999999999999999
Q ss_pred eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC--CCeEEEecCCcceeee
Q 010051 168 TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD--GSFLLVPAGSYKISSM 245 (519)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~~~~~~~~ 245 (519)
+|++||...... .+ +.....|...|.+++|+|+ +.+|++++.+
T Consensus 176 ~i~iW~~~~~~~--------~~---------------------~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D------ 220 (330)
T 2hes_X 176 TVRIWKDYDDDW--------EC---------------------VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD------ 220 (330)
T ss_dssp CEEEEEEETTEE--------EE---------------------EEEECCCSSCEEEEEECCSSSSCEEEEEETT------
T ss_pred eEEEEECCCCCe--------eE---------------------EEEccCCCCcEEEEEecCCCCeeEEEEEeCC------
Confidence 999999765421 01 1222356678999999998 6788888777
Q ss_pred ecccceEEEEeccCCC-------cccccCCC-CCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC
Q 010051 246 SESINSAYIFSRKDLS-------RPALQLPG-ASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE 317 (519)
Q Consensus 246 ~~~~~~i~i~~~~~~~-------~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~ 317 (519)
+.|++|++.... .....+.+ |...|.+++|++++ ++++++.||.|++|+..
T Consensus 221 ----~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-----------------~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 221 ----STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-----------------LIASVGADGVLAVYEEV 279 (330)
T ss_dssp ----SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-----------------CEEEEETTSCEEEEEEE
T ss_pred ----CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-----------------EEEEEeCCCEEEEEEcC
Confidence 699999986432 12333444 88999999999753 58889999999999998
Q ss_pred CCC--ceEEE-eccccc-cEEEEEEcC--CCCEEEEEeCCCcEEEEEecC
Q 010051 318 SVP--PIAIL-AGLHYA-AITDIAWSN--NARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 318 ~~~--~~~~~-~~~~~~-~i~~~~~s~--~g~~l~~~~~dg~i~vwd~~~ 361 (519)
+++ .+... .+ |.. .|++++|+| ++++|++|+.||.|+||+++.
T Consensus 280 ~~~~~~~~~~~~~-h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 280 DGEWKVFAKRALC-HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTEEEEEEEESCT-TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CCceEEEeccccc-cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 774 33333 44 776 899999999 789999999999999999864
No 60
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-38 Score=292.81 Aligned_cols=312 Identities=12% Similarity=0.101 Sum_probs=229.3
Q ss_pred CCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCc
Q 010051 11 HDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETG 90 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~ 90 (519)
.-...|.+++|||||+++|+++.|++|+ |...++ .+.+|...|.+++|+|++ .+..|++.++...
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~------------~l~gh~~~v~~V~FsPdg-~~~~~~~~~~~~~ 77 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK------------DINCNSKNLFHVKEFPLE-FENKLDFELAQQN 77 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS------------CCSSBGGGTEEEEEECCC-CCCTTTTSCCCSS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccc------------eecCCCccEEEEEECCCC-CcceEEEEeCCCc
Confidence 3467899999999999999999999999 644433 245799999999999987 6777777655321
Q ss_pred ccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEeccccc-----CeEEEEEcCCCCeEEEeeC
Q 010051 91 QAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFH-----YVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~ 165 (519)
....+ .|...|.+++|||+|++||+++.||.|++||..+ ++..+. |.. .|.+++|+|+|++|++|+.
T Consensus 78 ----~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 78 ----GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp ----CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET
T ss_pred ----eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC
Confidence 22222 3578899999999999999999999999999644 666667 665 4999999999999999999
Q ss_pred CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeee
Q 010051 166 DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSM 245 (519)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~ 245 (519)
||+|++||+..+...... +.....+ ......|...|.+++|+|+| +++++.+
T Consensus 150 DGtVkIWd~~~~~l~~~~---~i~l~ti-----------------~~~~~gh~~~V~sVawSPdg--Laass~D------ 201 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPE---FYFESSI-----------------RLSDAGSKDWVTHIVWYEDV--LVAALSN------ 201 (588)
T ss_dssp TSEEEEEECCCCTTTCCC---CEEEEEE-----------------ECSCTTCCCCEEEEEEETTE--EEEEETT------
T ss_pred CCEEEEEECCCCcccccc---ceeeeee-----------------ecccccccccEEEEEEcCCc--EEEEeCC------
Confidence 999999999876421100 0000000 00113456789999999999 6666665
Q ss_pred ecccceEEEEeccCCCcc--cccC-CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCce
Q 010051 246 SESINSAYIFSRKDLSRP--ALQL-PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPI 322 (519)
Q Consensus 246 ~~~~~~i~i~~~~~~~~~--~~~~-~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 322 (519)
+.+++|++...... ...+ .+|...|.+++|+ | +.+++++ ++.|++||+.+++..
T Consensus 202 ----~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g----------------~~LASa~-~~tIkLWd~~~~~~~ 258 (588)
T 2j04_A 202 ----NSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D----------------YKVVLTC-PGYVHKIDLKNYSIS 258 (588)
T ss_dssp ----CCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T----------------TEEEEEC-SSEEEEEETTTTEEE
T ss_pred ----CeEEEEECCCCccccceeeecccccCcEEEEEEE--C----------------CEEEEEe-CCeEEEEECCCCeEE
Confidence 69999999765421 2334 4788899999999 4 3456665 689999999987764
Q ss_pred EEEeccccccEEEEEE--cCCCCEEEEEeCCCcEEEEEecC-----Cc-c-------cceeeecCCcc---cccCCCCcc
Q 010051 323 AILAGLHYAAITDIAW--SNNARYLALSSQDGYCTLVEFEN-----DE-L-------GIPISLSGNKV---SKDENKSPL 384 (519)
Q Consensus 323 ~~~~~~~~~~i~~~~~--s~~g~~l~~~~~dg~i~vwd~~~-----~~-~-------~~~~~~~~~~~---~~~~~~~~~ 384 (519)
....+ |...|..++| +|++..|++++.||+ ++|.++. .. . ...+...+... .....+.++
T Consensus 259 ~~~~g-h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~v 336 (588)
T 2j04_A 259 SLKTG-SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGI 336 (588)
T ss_dssp EEECS-CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEE
T ss_pred EEEcC-CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEE
Confidence 44446 9999999999 999999999999999 9999742 10 0 00011110000 012236779
Q ss_pred cccCCccEEEeecC
Q 010051 385 VTKSEDMIIEASTN 398 (519)
Q Consensus 385 ~~s~~~~~l~~~~~ 398 (519)
+|||||..+|++++
T Consensus 337 a~SPdG~~lA~~~~ 350 (588)
T 2j04_A 337 SLSPDGYSIAIVYD 350 (588)
T ss_dssp EECTTSSEEEEEEE
T ss_pred EECCCCCEEEEEEe
Confidence 99999999998874
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=280.88 Aligned_cols=313 Identities=16% Similarity=0.217 Sum_probs=236.2
Q ss_pred CeeEEecCCCCCEEEEEEec-CCCEEEEEcCCCcEEEEEecCCccccccccccc----cccccccCcceeEEEEccC---
Q 010051 4 GTLQINWHDTKPVLTLDFHP-ISGLLATGGADYDIKIWLINSGEKQKKIPTASY----QNSLSYHGSAINILRFSPC--- 75 (519)
Q Consensus 4 ~~~~~~~~h~~~V~~~~~sp-~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~--- 75 (519)
....++.+|.+.|++++|+| ++++||+|+.||.|+|||+.++.....+..... .....+|...|.+++|+|+
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 45667788999999999999 999999999999999999998876654421111 1122469999999999994
Q ss_pred -------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCceEEEecccc
Q 010051 76 -------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTD---GAFLLSGSVDNSCIIWDVNKGSVLQILDAHF 145 (519)
Q Consensus 76 -------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 145 (519)
++.|++||+.++ +....+. +...+.+++|++. +.+|++++.|+.|++||+.+++.+..+..|.
T Consensus 114 ~l~s~~~d~~i~iwd~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 186 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTL------QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR 186 (408)
T ss_dssp CEEEEETTSEEEEEETTTT------EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC
T ss_pred EEEEEeCCCeEEEeeCCCC------ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC
Confidence 589999999876 4444444 7788999999984 4599999999999999999999999999999
Q ss_pred cCeEEEEEcCCCCe-EEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEE
Q 010051 146 HYVQGVAWDPLSKY-VASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRL 224 (519)
Q Consensus 146 ~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (519)
..|.+++|+|++++ |++++.||.|++||++......... ..... ............+...|.++
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~---------~~~~~------~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITL---------DQHNG------KKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEEC---------CTTTT------CSCCCTTTSSCSCSSCEEEE
T ss_pred CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccc---------ccccc------ccceeeccccccccCceeEE
Confidence 99999999999985 8899999999999998765211100 00000 00000111123567789999
Q ss_pred EEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCC----CeEEEEEcCCcccccccCCCCcccccce
Q 010051 225 AWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASK----PVVAVRFCPLAFNLRESNSAGFFKLPYR 300 (519)
Q Consensus 225 ~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~----~v~~~~~sp~~~~l~~~~~~g~~~~~~~ 300 (519)
+|+|++++|++++.+ +.+++||+........ ...+.. ....+.+... .+ .
T Consensus 252 ~~~~~~~~l~~~~~d----------g~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~------~ 305 (408)
T 4a11_B 252 CFTSDGLHLLTVGTD----------NRMRLWNSSNGENTLV-NYGKVCNNSKKGLKFTVSCG---------CS------S 305 (408)
T ss_dssp EECTTSSEEEEEETT----------SCEEEEETTTCCBCCC-CCCCCCCCCSSCCCCEECCS---------SS------S
T ss_pred EEcCCCCEEEEecCC----------CeEEEEECCCCcccee-ccccccccccccceeEEecC---------CC------c
Confidence 999999999998877 6899999976543222 111110 0011111111 11 4
Q ss_pred EEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccc
Q 010051 301 LIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELG 365 (519)
Q Consensus 301 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~ 365 (519)
.+++++.++.|++||+.+++.+..+.+ |...|++++|+|++++|++++.||.|++|++.+.+..
T Consensus 306 ~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 306 EFVFVPYGSTIAVYTVYSGEQITMLKG-HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CEEEEEETTEEEEEETTTCCEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred eEEEEecCCEEEEEECcCCcceeeecc-CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 577788899999999999999999998 9999999999999999999999999999999987543
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=291.44 Aligned_cols=304 Identities=13% Similarity=0.220 Sum_probs=228.5
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcc
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQ 91 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~ 91 (519)
|.+.|++++|+|+|++||+|+.||.|+|||+.+++...... ..
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~-------------------------------------~~ 69 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHS-------------------------------------RG 69 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCC-------------------------------------CC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccc-------------------------------------cc
Confidence 57899999999999999999999999999998765321000 00
Q ss_pred cceeeeccccCC------------CCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCceE-------------------
Q 010051 92 AWKVLKNLSFHR------------KDVLDLQWSTDG--AFLLSGSVDNSCIIWDVNKGSVL------------------- 138 (519)
Q Consensus 92 ~~~~~~~~~~~~------------~~v~~~~~s~~~--~~l~~~~~dg~i~vwd~~~~~~~------------------- 138 (519)
.+.....+.+|. ..|++++|+|++ .+|++++.|+.|++||+.++...
T Consensus 70 ~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~ 149 (447)
T 3dw8_B 70 EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTV 149 (447)
T ss_dssp CEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCC
T ss_pred ceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccc
Confidence 112344455566 889999999998 79999999999999999764432
Q ss_pred --------------------EE-ecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccC
Q 010051 139 --------------------QI-LDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAG 197 (519)
Q Consensus 139 --------------------~~-~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 197 (519)
.. ..+|...|.+++|+|++++|+++ .|+.|++||++.... +...+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~---------~~~~~~~-- 217 (447)
T 3dw8_B 150 TTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDR---------SFNIVDI-- 217 (447)
T ss_dssp CSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE---------EEEEEEC--
T ss_pred cceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc---------eeeeeec--
Confidence 12 36799999999999999999998 799999999974221 0000000
Q ss_pred cccccCCccccceeeecCCCcceeeEEEEccCC-CeEEEecCCcceeeeecccceEEEEeccCCCc---ccccCCCCCC-
Q 010051 198 QHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDG-SFLLVPAGSYKISSMSESINSAYIFSRKDLSR---PALQLPGASK- 272 (519)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~---~~~~~~~~~~- 272 (519)
.......+...|.+++|+|++ .+|++++.+ +.|++||++.... ....+..|..
T Consensus 218 ------------~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 275 (447)
T 3dw8_B 218 ------------KPANMEELTEVITAAEFHPNSCNTFVYSSSK----------GTIRLCDMRASALCDRHSKLFEEPEDP 275 (447)
T ss_dssp ------------CCSSGGGCCCCEEEEEECSSCTTEEEEEETT----------SCEEEEETTTCSSSCTTCEEECCC---
T ss_pred ------------ccccccccCcceEEEEECCCCCcEEEEEeCC----------CeEEEEECcCCccccceeeEeccCCCc
Confidence 000123456789999999998 899998877 6999999976543 1456667765
Q ss_pred -----------CeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCC-CCceEEEecccccc--------
Q 010051 273 -----------PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTES-VPPIAILAGLHYAA-------- 332 (519)
Q Consensus 273 -----------~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~-------- 332 (519)
.|.+++|+|++ +++++++. +.|++||+.+ ++++..+.+ |...
T Consensus 276 ~~~~~~~~~~~~v~~~~~s~~g----------------~~l~~~~~-~~v~iwd~~~~~~~~~~~~~-~~~~~~~l~~~~ 337 (447)
T 3dw8_B 276 SNRSFFSEIISSISDVKFSHSG----------------RYMMTRDY-LSVKVWDLNMENRPVETYQV-HEYLRSKLCSLY 337 (447)
T ss_dssp --CCHHHHHTTCEEEEEECTTS----------------SEEEEEES-SEEEEEETTCCSSCSCCEES-CGGGTTTHHHHH
T ss_pred cccccccccCceEEEEEECCCC----------------CEEEEeeC-CeEEEEeCCCCccccceeec-cccccccccccc
Confidence 89999999998 55777777 8999999997 888888887 6532
Q ss_pred -------EEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCc-----------------------------cc
Q 010051 333 -------ITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNK-----------------------------VS 376 (519)
Q Consensus 333 -------i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-----------------------------~~ 376 (519)
+..++|+|++++|++++.||.|++||+.+++.. .+..+. ..
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI---TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLD 414 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE---EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCC
T ss_pred cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce---eeeecccccccccccCCccccccCCcccccccccccc
Confidence 334999999999999999999999999887542 211111 01
Q ss_pred ccCCCCcccccCCccEEEeecCCceeeecCC
Q 010051 377 KDENKSPLVTKSEDMIIEASTNDKLVTAETK 407 (519)
Q Consensus 377 ~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~ 407 (519)
....+..++|+|++.+|++++.++..+|...
T Consensus 415 ~~~~i~~~~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 415 FNKKILHTAWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp TTSCCCEEEECSSSSEEEEECSSCEEEEECC
T ss_pred cCCceeEEEECCCCCEEEEEecceeeeeccc
Confidence 2346788999999999999999998888643
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-37 Score=292.96 Aligned_cols=308 Identities=13% Similarity=0.163 Sum_probs=227.5
Q ss_pred CCCeeEEe-cCCCCCEEEEEEec-CCCEEEEEcCCCcEEEEEecC---CccccccccccccccccccCcceeEEEEccC-
Q 010051 2 KGGTLQIN-WHDTKPVLTLDFHP-ISGLLATGGADYDIKIWLINS---GEKQKKIPTASYQNSLSYHGSAINILRFSPC- 75 (519)
Q Consensus 2 ~~~~~~~~-~~h~~~V~~~~~sp-~~~~la~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 75 (519)
++..+..+ .+|.+.|++++|+| ++++||+|+.||+|+|||+.+ +..... .. ...|...|.+++|+|+
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~------~~-~~~h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSS------SL-TYDCSSTVTQITMIPNF 123 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSC------SE-EEECSSCEEEEEECTTS
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccce------ee-eccCCCCEEEEEEeCCC
Confidence 34556666 78999999999999 999999999999999999987 331110 11 1148999999999987
Q ss_pred --------CCeEEEEEcc---cCCCcccc--eeeecc--cc--CCCCeEEEE--EcCCCCEEEEEeCCCeEEEEEcCCCc
Q 010051 76 --------GGELIIWKLH---TTETGQAW--KVLKNL--SF--HRKDVLDLQ--WSTDGAFLLSGSVDNSCIIWDVNKGS 136 (519)
Q Consensus 76 --------~~~i~vw~~~---~~~~~~~~--~~~~~~--~~--~~~~v~~~~--~s~~~~~l~~~~~dg~i~vwd~~~~~ 136 (519)
|+.|++||+. .+...... ..+..+ .. +...+.++. +++++.+|++|+.|+.|++||+++++
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 5899999995 22111100 111111 12 567788887 66899999999999999999999999
Q ss_pred eEEEecc--cccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeec
Q 010051 137 VLQILDA--HFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHD 214 (519)
Q Consensus 137 ~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (519)
.+..+.. |...|++++|+|++++|++++.||.|++||++.++.... + .
T Consensus 204 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~----------~--------------------~ 253 (437)
T 3gre_A 204 RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRS----------W--------------------S 253 (437)
T ss_dssp EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE----------E--------------------B
T ss_pred eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEE----------E--------------------e
Confidence 9999988 889999999999999999999999999999987542110 0 0
Q ss_pred CCCcceeeEEEEc----cCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccC
Q 010051 215 ETLPSFFRRLAWS----PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESN 290 (519)
Q Consensus 215 ~~~~~~i~~~~~s----p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 290 (519)
..+...|.+++|+ |++.+|++++.+ +.|++||+... .....+.+|...+..+.|+|++..+....
T Consensus 254 ~~~~~~v~~~~~~~~~s~~~~~l~s~~~d----------g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 322 (437)
T 3gre_A 254 FGDHAPITHVEVCQFYGKNSVIVVGGSSK----------TFLTIWNFVKG-HCQYAFINSDEQPSMEHFLPIEKGLEELN 322 (437)
T ss_dssp CTTCEEEEEEEECTTTCTTEEEEEEESTT----------EEEEEEETTTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCC
T ss_pred cCCCCceEEEEeccccCCCccEEEEEcCC----------CcEEEEEcCCC-cEEEEEEcCCCCCccceecccccccccce
Confidence 1334578889655 568899988877 68999998654 33444445555555555555443332211
Q ss_pred CCC----------cccccceEEEEEecCCeEEEEeCCCCCceEEEecc--------------------------------
Q 010051 291 SAG----------FFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGL-------------------------------- 328 (519)
Q Consensus 291 ~~g----------~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-------------------------------- 328 (519)
..+ .+. +.+++++++.|+.|++||+.+++....+.+.
T Consensus 323 ~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (437)
T 3gre_A 323 FCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVD 401 (437)
T ss_dssp CCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC--------
T ss_pred ecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccC
Confidence 111 011 2268999999999999999999887777652
Q ss_pred ----ccccEEEEEEcCC--CCEEEEEeCCCcEEEEE
Q 010051 329 ----HYAAITDIAWSNN--ARYLALSSQDGYCTLVE 358 (519)
Q Consensus 329 ----~~~~i~~~~~s~~--g~~l~~~~~dg~i~vwd 358 (519)
|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 402 ~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 402 DSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -----CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 7889999999998 78999999999999994
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=8.3e-36 Score=276.42 Aligned_cols=275 Identities=17% Similarity=0.212 Sum_probs=218.6
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
.++.+|.+.|++++|+|++++||+|+.||.|+|||+.++....
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~------------------------------------- 47 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNW------------------------------------- 47 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCE-------------------------------------
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcc-------------------------------------
Confidence 4667999999999999999999999999999999998654211
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC---------ceEEEecccccCeEEEEEcC
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWST--DGAFLLSGSVDNSCIIWDVNKG---------SVLQILDAHFHYVQGVAWDP 155 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~ 155 (519)
.....+.+|...|++++|+| ++++|++|+.||.|++||+.++ +.+..+..|...|.+++|+|
T Consensus 48 -------~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 120 (351)
T 3f3f_A 48 -------ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP 120 (351)
T ss_dssp -------EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC
T ss_pred -------eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC
Confidence 23445567999999999999 6999999999999999999887 55778889999999999999
Q ss_pred C--CCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC---C
Q 010051 156 L--SKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD---G 230 (519)
Q Consensus 156 ~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~---g 230 (519)
+ +++|++++.||.|++||++..+........... .........+...+.+++|+|+ +
T Consensus 121 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~p~~~~~ 182 (351)
T 3f3f_A 121 AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM------------------KVLSIPPANHLQSDFCLSWCPSRFSP 182 (351)
T ss_dssp GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE------------------ESCSCCCSSCSCCCEEEEECCCSSSC
T ss_pred CCCCcEEEEecCCCcEEEecCCChHHhccccccccc------------------cccccccCCcccceeEEEeccCCCCC
Confidence 9 999999999999999999887643322211100 0001122245567889999997 8
Q ss_pred CeEEEecCCcceeeeecccceEEEEeccCCC-cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC
Q 010051 231 SFLLVPAGSYKISSMSESINSAYIFSRKDLS-RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN 309 (519)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~ 309 (519)
.++++++.+ +.+.+|+..... .....+.+|...|++++|+|++.. ..+++++++.||
T Consensus 183 ~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~------------~~~~l~s~~~dg 240 (351)
T 3f3f_A 183 EKLAVSALE----------QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGR------------WYQLIATGCKDG 240 (351)
T ss_dssp CEEEEEETT----------EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSC------------SSEEEEEEETTS
T ss_pred cEEEEecCC----------CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCC------------cceEEEEEcCCC
Confidence 999988877 455555544332 235667889999999999998621 004688889999
Q ss_pred eEEEEeCCCC----------------------------------------------CceEEEeccccccEEEEEEcCCCC
Q 010051 310 SLYIYDTESV----------------------------------------------PPIAILAGLHYAAITDIAWSNNAR 343 (519)
Q Consensus 310 ~i~vwd~~~~----------------------------------------------~~~~~~~~~~~~~i~~~~~s~~g~ 343 (519)
.|++||+..+ +.+..+.+ |...|++++|+|+++
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~ 319 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD-HNGEVWSVSWNLTGT 319 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEECT-TSSCEEEEEECSSSC
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec-ccccEEEEEEcCCCC
Confidence 9999998864 55666777 999999999999999
Q ss_pred EEEEEeCCCcEEEEEecCCcccc
Q 010051 344 YLALSSQDGYCTLVEFENDELGI 366 (519)
Q Consensus 344 ~l~~~~~dg~i~vwd~~~~~~~~ 366 (519)
+|++++.||.|++|++..++...
T Consensus 320 ~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 320 ILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp CEEEEETTSCEEEEEECTTSCEE
T ss_pred EEEEecCCCcEEEEecCcCcchh
Confidence 99999999999999999875433
No 65
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.6e-36 Score=272.38 Aligned_cols=285 Identities=18% Similarity=0.156 Sum_probs=230.0
Q ss_pred eeeeccccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCC-----CceEEEecccccCeEEEEEcCCCCeEEEeeCCC
Q 010051 94 KVLKNLSFHRKDVLDLQWSTDG-AFLLSGSVDNSCIIWDVNK-----GSVLQILDAHFHYVQGVAWDPLSKYVASLSSDR 167 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg 167 (519)
.....+.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +..+..+.+|...|.+++|+|++++|++++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 5667788999999999999965 8999999999999999864 345678899999999999999999999999999
Q ss_pred eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeec
Q 010051 168 TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSE 247 (519)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~ 247 (519)
+|++||+.+++.. .....|...|.+++|+|++.++++++.+
T Consensus 88 ~v~~wd~~~~~~~-------------------------------~~~~~h~~~v~~~~~~~~~~~l~s~s~D-------- 128 (319)
T 3frx_A 88 TLRLWDVATGETY-------------------------------QRFVGHKSDVMSVDIDKKASMIISGSRD-------- 128 (319)
T ss_dssp EEEEEETTTTEEE-------------------------------EEEECCSSCEEEEEECTTSCEEEEEETT--------
T ss_pred EEEEEECCCCCee-------------------------------EEEccCCCcEEEEEEcCCCCEEEEEeCC--------
Confidence 9999999876421 1122466789999999999999998887
Q ss_pred ccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 248 SINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 248 ~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
+.+++||+.. .....+.+|...|.++.|+|....- .++ ..+++++.|+.|++||+.+++....+.+
T Consensus 129 --~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~~~~~----~~~------~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 194 (319)
T 3frx_A 129 --KTIKVWTIKG--QCLATLLGHNDWVSQVRVVPNEKAD----DDS------VTIISAGNDKMVKAWNLNQFQIEADFIG 194 (319)
T ss_dssp --SCEEEEETTS--CEEEEECCCSSCEEEEEECCC----------C------CEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred --CeEEEEECCC--CeEEEEeccCCcEEEEEEccCCCCC----CCc------cEEEEEeCCCEEEEEECCcchhheeecC
Confidence 6999999863 4566778999999999999965321 111 4789999999999999999999889988
Q ss_pred cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeecCC
Q 010051 328 LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETK 407 (519)
Q Consensus 328 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~ 407 (519)
|...|++++|+|+|++|++++.||.|++||+.+++....+. . ...+.+++|+|++.+|+++..++..+|...
T Consensus 195 -h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~-----~~~v~~~~~sp~~~~la~~~~~~i~v~~~~ 266 (319)
T 3frx_A 195 -HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS--A-----QDEVFSLAFSPNRYWLAAATATGIKVFSLD 266 (319)
T ss_dssp -CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-----CSCEEEEEECSSSSEEEEEETTEEEEEEET
T ss_pred -CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--C-----CCcEEEEEEcCCCCEEEEEcCCCcEEEEeC
Confidence 99999999999999999999999999999998875443332 2 246889999999999999999887777654
Q ss_pred CCCcc------------------ccccccCCCceEEeccccceeeeeccc
Q 010051 408 EPDKR------------------KTEAETKDDETAINGSIAAESRLIEPE 439 (519)
Q Consensus 408 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (519)
..... ......++...++.++.++.+++|+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 267 PQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 32110 011234566677778888888888654
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-36 Score=287.16 Aligned_cols=272 Identities=15% Similarity=0.223 Sum_probs=230.3
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CCeEEEE
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GGELIIW 82 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~i~vw 82 (519)
|.+.|++++|+|++++||+|+.||.|+||| .+++... .+..|...|.+++|+|+ ++.|++|
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 176 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLN---------VLNFHRAPIVSVKWNKDGTHIISMDVENVTILW 176 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEE---------EECCCCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeee---------eccCCCccEEEEEECCCCCEEEEEecCCeEEEE
Confidence 788999999999999999999999999999 4444332 35678999999999987 4889999
Q ss_pred EcccCCCcccceeeeccccCCCC---------------eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccC
Q 010051 83 KLHTTETGQAWKVLKNLSFHRKD---------------VLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHY 147 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~ 147 (519)
|+.++ +.+..+..+... +.+++|++++ .+++++.+|.|++||+.+++.+..+..|...
T Consensus 177 d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 249 (425)
T 1r5m_A 177 NVISG------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGP 249 (425)
T ss_dssp ETTTT------EEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSC
T ss_pred ECCCC------cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCc
Confidence 99876 556666666665 9999999975 5888999999999999999999999999999
Q ss_pred eEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 148 VQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 148 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
|.+++|+|++++|++++.||.|++||++..+.. .....+...|.+++|+
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-------------------------------~~~~~~~~~i~~~~~~ 298 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ-------------------------------NCFYGHSQSIVSASWV 298 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBSCS-------------------------------EEECCCSSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCccc-------------------------------eEecCCCccEEEEEEC
Confidence 999999999999999999999999999875421 1112356778999999
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT 307 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~ 307 (519)
|++ ++++++.+ +.+++||+... .....+..|...+.+++|+|++ +++++++.
T Consensus 299 ~~~-~l~~~~~d----------~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~~~----------------~~l~~~~~ 350 (425)
T 1r5m_A 299 GDD-KVISCSMD----------GSVRLWSLKQN-TLLALSIVDGVPIFAGRISQDG----------------QKYAVAFM 350 (425)
T ss_dssp TTT-EEEEEETT----------SEEEEEETTTT-EEEEEEECTTCCEEEEEECTTS----------------SEEEEEET
T ss_pred CCC-EEEEEeCC----------CcEEEEECCCC-cEeEecccCCccEEEEEEcCCC----------------CEEEEEEC
Confidence 999 88887766 69999999754 4556677888999999999998 66888888
Q ss_pred CCeEEEEeCCCCC--------------------ceEEEeccccc--cEEEEEEcCCCCEEEEEeCCCcEEEEEec
Q 010051 308 LNSLYIYDTESVP--------------------PIAILAGLHYA--AITDIAWSNNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 308 d~~i~vwd~~~~~--------------------~~~~~~~~~~~--~i~~~~~s~~g~~l~~~~~dg~i~vwd~~ 360 (519)
||.|++||+.++. .+..+.. |.. .|++++|+|++++|++++.||.|++|+++
T Consensus 351 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 351 DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS-SQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TSCEEEEECHHHHC--------------CEECCEEEEECC-TTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC-cccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 9999999999887 7888888 765 99999999999999999999999999985
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-36 Score=280.48 Aligned_cols=259 Identities=20% Similarity=0.272 Sum_probs=213.5
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEE
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIW 82 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw 82 (519)
|..++.+.+|.+.|++++|+|++++||+|+.||.|+|||+..+..
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~----------------------------------- 45 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH----------------------------------- 45 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-----------------------------------
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-----------------------------------
Confidence 345677889999999999999999999999999999999874321
Q ss_pred EcccCCCcccceeeeccccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCc--eEEEecccccCeEEEEEcCC--
Q 010051 83 KLHTTETGQAWKVLKNLSFHRKDVLDLQWSTD--GAFLLSGSVDNSCIIWDVNKGS--VLQILDAHFHYVQGVAWDPL-- 156 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~-- 156 (519)
..+..+.+|...|++++|+++ +++|++|+.||.|++||+.+++ .+..+..|...|.+++|+|+
T Consensus 46 -----------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 114 (379)
T 3jrp_A 46 -----------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 114 (379)
T ss_dssp -----------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred -----------eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCC
Confidence 234455679999999999987 9999999999999999999987 67778889999999999999
Q ss_pred CCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc--------
Q 010051 157 SKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-------- 228 (519)
Q Consensus 157 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-------- 228 (519)
+++|++++.||.|++||++....... .....+...|.+++|+|
T Consensus 115 ~~~l~~~~~d~~i~v~d~~~~~~~~~-----------------------------~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 115 GPLLLVASSDGKVSVVEFKENGTTSP-----------------------------IIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp CSEEEEEETTSEEEEEECCTTSCCCE-----------------------------EEEECCTTCEEEEEECCCC------
T ss_pred CCEEEEecCCCcEEEEecCCCCceee-----------------------------EEecCCCCceEEEEEcCcccccccc
Confidence 99999999999999999987642111 11224567799999999
Q ss_pred -----CCCeEEEecCCcceeeeecccceEEEEeccCCCc---ccccCCCCCCCeEEEEEcCC---cccccccCCCCcccc
Q 010051 229 -----DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR---PALQLPGASKPVVAVRFCPL---AFNLRESNSAGFFKL 297 (519)
Q Consensus 229 -----~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~---~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~~g~~~~ 297 (519)
++.++++++.+ +.|++||++.... ....+.+|...|.+++|+|+ +
T Consensus 166 ~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-------------- 221 (379)
T 3jrp_A 166 HNGTKESRKFVTGGAD----------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-------------- 221 (379)
T ss_dssp ----CTTCEEEEEETT----------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS--------------
T ss_pred ccCCCCCCEEEEEeCC----------CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC--------------
Confidence 69999998877 6899999975542 34567789999999999998 5
Q ss_pred cceEEEEEecCCeEEEEeCCCCCce--EEEec--cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 298 PYRLIFAIATLNSLYIYDTESVPPI--AILAG--LHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 298 ~~~~~~~~~~d~~i~vwd~~~~~~~--~~~~~--~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
+++++++.||.|++||+.++... ..+.. .|...|++++|+|+|++|++++.||.|++|++...
T Consensus 222 --~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 222 --SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp --EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred --CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 67899999999999999986421 12211 27789999999999999999999999999999854
No 68
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-35 Score=268.02 Aligned_cols=267 Identities=18% Similarity=0.194 Sum_probs=205.0
Q ss_pred eccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--CceEEEecccccCeEEEEEcCC--CCeEEEeeCCCeEEEE
Q 010051 97 KNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK--GSVLQILDAHFHYVQGVAWDPL--SKYVASLSSDRTCRIY 172 (519)
Q Consensus 97 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~iw 172 (519)
..+.+|...|++++|+|+|++|++|+.|++|++||+.. ++.+..+.+|...|.+++|+++ +++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 34567999999999999999999999999999999974 3677889999999999999864 8899999999999999
Q ss_pred ecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC--CCeEEEecCCcceeeeecccc
Q 010051 173 ANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD--GSFLLVPAGSYKISSMSESIN 250 (519)
Q Consensus 173 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~~~~~~~~~~~~~ 250 (519)
|+.+++... +.....+...|.+++|+|+ |.+|++++.+ +
T Consensus 83 d~~~~~~~~-----------------------------~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d----------~ 123 (297)
T 2pm7_B 83 KEENGRWSQ-----------------------------IAVHAVHSASVNSVQWAPHEYGPMLLVASSD----------G 123 (297)
T ss_dssp EBSSSCBCC-----------------------------CEEECCCSSCEEEEEECCGGGCSEEEEEETT----------S
T ss_pred EcCCCceEE-----------------------------EEEeecCCCceeEEEeCcCCCCcEEEEEECC----------C
Confidence 998653211 1111245677999999998 8899998877 6
Q ss_pred eEEEEeccCCCc-ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCC----ceEEE
Q 010051 251 SAYIFSRKDLSR-PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVP----PIAIL 325 (519)
Q Consensus 251 ~i~i~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~----~~~~~ 325 (519)
.+++|++..... ....+.+|...|.+++|+|++....... ......+++++++.|+.|++||+.++. ....+
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~---~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l 200 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH---NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL 200 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccC---CCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe
Confidence 999999976532 2345678999999999999753210000 000011579999999999999998776 55677
Q ss_pred eccccccEEEEEEcCCC---CEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee
Q 010051 326 AGLHYAAITDIAWSNNA---RYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV 402 (519)
Q Consensus 326 ~~~~~~~i~~~~~s~~g---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i 402 (519)
.+ |...|++++|+|++ ++|++++.|++|+|||+............. ...+...+.+++|+|++.+|++++.|+.+
T Consensus 201 ~~-H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~las~~~D~~v 278 (297)
T 2pm7_B 201 EG-HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (297)
T ss_dssp CC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS-SSCCSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred cC-CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeee-cccCCCcEEEEEECCCCCEEEEEcCCCcE
Confidence 77 99999999999995 899999999999999998753211111110 01124678899999999999999988877
Q ss_pred -eecCC
Q 010051 403 -TAETK 407 (519)
Q Consensus 403 -~~~~~ 407 (519)
+|+..
T Consensus 279 ~lw~~~ 284 (297)
T 2pm7_B 279 TLWKEN 284 (297)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 66543
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-35 Score=277.85 Aligned_cols=288 Identities=16% Similarity=0.219 Sum_probs=232.0
Q ss_pred CCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCc
Q 010051 11 HDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETG 90 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~ 90 (519)
+|...+.+.++++++..+++++.|+.|+|||+.+++....+
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~--------------------------------------- 129 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALA--------------------------------------- 129 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEE---------------------------------------
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEee---------------------------------------
Confidence 55555444333333566778888999999998876532110
Q ss_pred ccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEE
Q 010051 91 QAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCR 170 (519)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~ 170 (519)
...|...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +++|++++.||.|+
T Consensus 130 --------~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~ 199 (401)
T 4aez_A 130 --------ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIH 199 (401)
T ss_dssp --------ECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred --------ecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEE
Confidence 01278889999999999999999999999999999999999999999999999994 67999999999999
Q ss_pred EEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccc
Q 010051 171 IYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESIN 250 (519)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~ 250 (519)
+||++..... +.....+...|.+++|+|++.++++++.+ +
T Consensus 200 i~d~~~~~~~------------------------------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----------~ 239 (401)
T 4aez_A 200 HHDVRIANHQ------------------------------IGTLQGHSSEVCGLAWRSDGLQLASGGND----------N 239 (401)
T ss_dssp EEETTSSSCE------------------------------EEEEECCSSCEEEEEECTTSSEEEEEETT----------S
T ss_pred EEecccCcce------------------------------eeEEcCCCCCeeEEEEcCCCCEEEEEeCC----------C
Confidence 9999854310 11122456789999999999999998877 6
Q ss_pred eEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe--cCCeEEEEeCCCCCceEEEecc
Q 010051 251 SAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA--TLNSLYIYDTESVPPIAILAGL 328 (519)
Q Consensus 251 ~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~--~d~~i~vwd~~~~~~~~~~~~~ 328 (519)
.|++||+.. ..+...+..|...|.+++|+|++.. ++++++ .|+.|++||+.+++.+..+.
T Consensus 240 ~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~---------------ll~~~~gs~d~~i~i~d~~~~~~~~~~~-- 301 (401)
T 4aez_A 240 VVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSN---------------LLATGGGTMDKQIHFWNAATGARVNTVD-- 301 (401)
T ss_dssp CEEEEETTC-SSEEEEECCCSSCCCEEEECTTSTT---------------EEEEECCTTTCEEEEEETTTCCEEEEEE--
T ss_pred eEEEccCCC-CCccEEecCCcceEEEEEECCCCCC---------------EEEEecCCCCCEEEEEECCCCCEEEEEe--
Confidence 999999975 3556667789999999999998753 355544 68999999999999988886
Q ss_pred ccccEEEEEEcCCCCEEEEEe--CCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eec
Q 010051 329 HYAAITDIAWSNNARYLALSS--QDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAE 405 (519)
Q Consensus 329 ~~~~i~~~~~s~~g~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~ 405 (519)
+...|++++|+|++++|++++ .||.|++|++.++.......+.+|. ..+.+++|+|++.+|++++.|+.+ +|+
T Consensus 302 ~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~----~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 302 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD----TRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCS----SCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCC----CCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 567899999999999999954 8999999999987666665565554 689999999999999999988877 776
Q ss_pred CCCC
Q 010051 406 TKEP 409 (519)
Q Consensus 406 ~~~~ 409 (519)
....
T Consensus 378 ~~~~ 381 (401)
T 4aez_A 378 VYDG 381 (401)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 5543
No 70
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.6e-36 Score=275.47 Aligned_cols=290 Identities=12% Similarity=0.088 Sum_probs=229.1
Q ss_pred eEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 6 LQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
+.+..+|.+.|++++|+|++++|++++.|+.|+||++.++...
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~------------------------------------- 46 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN------------------------------------- 46 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE-------------------------------------
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc-------------------------------------
Confidence 4556789999999999999999999999999999999866421
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEc-CCCceEEEecc--cccCeEEEEEcCCCCeEE
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGA-FLLSGSVDNSCIIWDV-NKGSVLQILDA--HFHYVQGVAWDPLSKYVA 161 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~-~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~ 161 (519)
.....+.+|...|++++|+|+++ +|++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| +++|+
T Consensus 47 --------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~ 116 (342)
T 1yfq_A 47 --------VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLI 116 (342)
T ss_dssp --------EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEE
T ss_pred --------ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEE
Confidence 01122235889999999999999 9999999999999999 77765 67788 999999999999 99999
Q ss_pred EeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcc
Q 010051 162 SLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYK 241 (519)
Q Consensus 162 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~ 241 (519)
+++.|+.|++||++........ . .........+...+.+++|+|++ +++++.+
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~-------~----------------~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d-- 169 (342)
T 1yfq_A 117 AASWDGLIEVIDPRNYGDGVIA-------V----------------KNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN-- 169 (342)
T ss_dssp EEETTSEEEEECHHHHTTBCEE-------E----------------EESCSSSSSSCCCEEEEEECSSE--EEEEEST--
T ss_pred EEcCCCeEEEEccccccccccc-------c----------------cCCeeeEEeeCCceEEEEecCCc--EEEEeCC--
Confidence 9999999999998751100000 0 00001111255778999999988 7776665
Q ss_pred eeeeecccceEEEEeccC-CCc-ccccCCCCCCCeEEEEEcC-CcccccccCCCCcccccceEEEEEecCCeEEEEeCCC
Q 010051 242 ISSMSESINSAYIFSRKD-LSR-PALQLPGASKPVVAVRFCP-LAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTES 318 (519)
Q Consensus 242 ~~~~~~~~~~i~i~~~~~-~~~-~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~ 318 (519)
+.+++||+.. ... .......|...+.+++|+| ++ +++++++.||.|++|++..
T Consensus 170 --------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~----------------~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 170 --------SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ----------------EGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp --------TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG----------------CEEEEEETTSEEEEEECCT
T ss_pred --------CeEEEEECCccccccceeeecCCCCceeEEEECCCCC----------------CEEEEEecCCcEEEEEEcC
Confidence 6999999986 433 2234456788999999999 88 6688888999999999988
Q ss_pred C------CceEEEeccccc---------cEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCc
Q 010051 319 V------PPIAILAGLHYA---------AITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSP 383 (519)
Q Consensus 319 ~------~~~~~~~~~~~~---------~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
. +....+.. |.. .|++++|+|++++|++++.||.|++||+.+++... .+.++. ...+.+
T Consensus 226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~h---~~~v~~ 299 (342)
T 1yfq_A 226 QGDDYNSSKRFAFRC-HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK--NFAKFN---EDSVVK 299 (342)
T ss_dssp TCCSTTCTTCEEEEC-CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE--ECCCCS---SSEEEE
T ss_pred CCcccccccceeeec-ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhh--hhhccc---CCCceE
Confidence 7 78888887 755 99999999999999999999999999998875432 333331 346777
Q ss_pred ccccCCccEEEeecCCce
Q 010051 384 LVTKSEDMIIEASTNDKL 401 (519)
Q Consensus 384 ~~~s~~~~~l~~~~~d~~ 401 (519)
++ |++.+|++++.|+.
T Consensus 300 ~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 300 IA--CSDNILCLATSDDT 315 (342)
T ss_dssp EE--ECSSEEEEEEECTH
T ss_pred ec--CCCCeEEEEecCCc
Confidence 77 99999999999986
No 71
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9.7e-35 Score=267.80 Aligned_cols=260 Identities=17% Similarity=0.184 Sum_probs=207.9
Q ss_pred eeeeccccCCCCeEEEEE-----cC-CCCEEEEEeCCCeEEEEEcCCC-------ceEEEecccccCeEEEEEcCCCCeE
Q 010051 94 KVLKNLSFHRKDVLDLQW-----ST-DGAFLLSGSVDNSCIIWDVNKG-------SVLQILDAHFHYVQGVAWDPLSKYV 160 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~-----s~-~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l 160 (519)
.....+.+|...|++++| ++ ++++|++|+.|++|++||+.++ .....+.+|...|.+++|+|++.+|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 456678899999999999 77 8999999999999999999753 4566789999999999999999999
Q ss_pred EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCc
Q 010051 161 ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSY 240 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~ 240 (519)
++++.|++|++||+++++.. .....|...|.+++|+|++++|++++.+
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~-------------------------------~~~~~h~~~v~~v~~sp~~~~l~s~~~d- 139 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTY-------------------------------KRFVGHQSEVYSVAFSPDNRQILSAGAE- 139 (343)
T ss_dssp EEEETTSEEEEEETTSSCEE-------------------------------EEEECCCSCEEEEEECSSTTEEEEEETT-
T ss_pred EEEcCCCcEEEEECCCCcEE-------------------------------EEEcCCCCcEEEEEECCCCCEEEEEcCC-
Confidence 99999999999999876421 1112456789999999999999998877
Q ss_pred ceeeeecccceEEEEeccCCCc-ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCC
Q 010051 241 KISSMSESINSAYIFSRKDLSR-PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV 319 (519)
Q Consensus 241 ~~~~~~~~~~~i~i~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~ 319 (519)
+.+++||+..... ......+|...|.+++|+|++.........+ .++++++.|+.|++||. ..
T Consensus 140 ---------~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~~l~s~~~d~~i~iwd~-~~ 203 (343)
T 2xzm_R 140 ---------REIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFA------PYFASVGWDGRLKVWNT-NF 203 (343)
T ss_dssp ---------SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSC------CEEEEEETTSEEEEEET-TT
T ss_pred ---------CEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCC------CEEEEEcCCCEEEEEcC-CC
Confidence 6999999863211 1122347888999999999875433222222 67999999999999994 46
Q ss_pred CceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCC
Q 010051 320 PPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTND 399 (519)
Q Consensus 320 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d 399 (519)
.....+.+ |...|++++|+|+|++|++++.||.|++||+......... . . ....+.+++|+|++.+++++.++
T Consensus 204 ~~~~~~~~-h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~-~-~----~~~~v~~v~~sp~~~~la~~~d~ 276 (343)
T 2xzm_R 204 QIRYTFKA-HESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQRE-F-D----AGSTINQIAFNPKLQWVAVGTDQ 276 (343)
T ss_dssp EEEEEEEC-CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEE-E-E----CSSCEEEEEECSSSCEEEEEESS
T ss_pred ceeEEEcC-ccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccccee-e-c----CCCcEEEEEECCCCCEEEEECCC
Confidence 66777888 9999999999999999999999999999999543221111 1 1 13468899999999999988888
Q ss_pred ceeeecCCC
Q 010051 400 KLVTAETKE 408 (519)
Q Consensus 400 ~~i~~~~~~ 408 (519)
+..+|+...
T Consensus 277 ~v~iw~~~~ 285 (343)
T 2xzm_R 277 GVKIFNLMT 285 (343)
T ss_dssp CEEEEESSS
T ss_pred CEEEEEeCC
Confidence 888887653
No 72
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.1e-35 Score=302.28 Aligned_cols=373 Identities=13% Similarity=0.117 Sum_probs=279.1
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC------- 75 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------- 75 (519)
+..+..+.+|.+.|++++|+|++++||+|+.||.|+|||+.+++.... +.+|...|.+++|+|+
T Consensus 45 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---------~~~~~~~v~~~~~s~~~~~l~~~ 115 (814)
T 3mkq_A 45 QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---------FEAHPDYIRSIAVHPTKPYVLSG 115 (814)
T ss_dssp TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---------EECCSSCEEEEEECSSSSEEEEE
T ss_pred CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE---------EecCCCCEEEEEEeCCCCEEEEE
Confidence 445667778999999999999999999999999999999998875543 5568999999999998
Q ss_pred --CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceEEEecccc-cCeEEE
Q 010051 76 --GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST-DGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF-HYVQGV 151 (519)
Q Consensus 76 --~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~ 151 (519)
++.|++|++..+. .....+.+|...|.+++|+| ++..|++++.||.|++||+.++.....+..+. ..+.++
T Consensus 116 ~~dg~i~vw~~~~~~-----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~ 190 (814)
T 3mkq_A 116 SDDLTVKLWNWENNW-----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYV 190 (814)
T ss_dssp ETTSEEEEEEGGGTS-----EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEE
T ss_pred cCCCEEEEEECCCCc-----eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEE
Confidence 4899999997652 45667778999999999999 88999999999999999999888777776554 889999
Q ss_pred EEcC--CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 152 AWDP--LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 152 ~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
+|+| ++.+|++++.||.|++||+.+++.. .....+...|.+++|+|+
T Consensus 191 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-------------------------------~~~~~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 191 DYYPLPDKPYMITASDDLTIKIWDYQTKSCV-------------------------------ATLEGHMSNVSFAVFHPT 239 (814)
T ss_dssp EECCSTTCCEEEEECTTSEEEEEETTTTEEE-------------------------------EEEECCSSCEEEEEECSS
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCcEE-------------------------------EEEcCCCCCEEEEEEcCC
Confidence 9999 9999999999999999999875411 111234567899999999
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN 309 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~ 309 (519)
+.++++++.+ +.+++||.... .....+..+...+.+++|+|++..+ +++++.++
T Consensus 240 ~~~l~~~~~d----------g~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~---------------~~~~~~~~ 293 (814)
T 3mkq_A 240 LPIIISGSED----------GTLKIWNSSTY-KVEKTLNVGLERSWCIATHPTGRKN---------------YIASGFDN 293 (814)
T ss_dssp SSEEEEEETT----------SCEEEEETTTC-SEEEEECCSSSSEEEEEECTTCGGG---------------EEEEEETT
T ss_pred CCEEEEEeCC----------CeEEEEECCCC-cEEEEeecCCCcEEEEEEccCCCce---------------EEEEEeCC
Confidence 9999998877 68999998754 5566677888999999999998642 23333344
Q ss_pred eEEEEeCCCCCce-------------------------------------------EEEeccccccEEEEEEcCCCCEEE
Q 010051 310 SLYIYDTESVPPI-------------------------------------------AILAGLHYAAITDIAWSNNARYLA 346 (519)
Q Consensus 310 ~i~vwd~~~~~~~-------------------------------------------~~~~~~~~~~i~~~~~s~~g~~l~ 346 (519)
.+.+|++...... ..+.. +...+++++|+|+|++|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~la 372 (814)
T 3mkq_A 294 GFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGS-VDVFPQSLAHSPNGRFVT 372 (814)
T ss_dssp EEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECC-CSSCCSEEEECTTSSEEE
T ss_pred CEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCC-CccCCceeEECCCCCEEE
Confidence 4555554432211 11122 455688999999999999
Q ss_pred EEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCCCC--ccccccccCCC--
Q 010051 347 LSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKEPD--KRKTEAETKDD-- 421 (519)
Q Consensus 347 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~~~--~~~~~~~~~~~-- 421 (519)
+++ ||.+.+|++...... ....+.+++|+|++.++++++.++.+ +|...... ........++.
T Consensus 373 ~~~-~~~~~i~~~~~~~~~-----------~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg~~ 440 (814)
T 3mkq_A 373 VVG-DGEYVIYTALAWRNK-----------AFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLF 440 (814)
T ss_dssp EEE-TTEEEEEETTTTEEE-----------EEEECSEEEECTTSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCEEE
T ss_pred Eec-CCEEEEEECcccccc-----------CCCceEEEEEeCCCCeEEEEeCCCcEEEEECCCCccceEEcCCcCcccee
Confidence 998 899999997533211 12467899999999999999888766 66543221 11222223333
Q ss_pred -ceEEeccccceeeeeccccccccc-----cccceeccCCceec
Q 010051 422 -ETAINGSIAAESRLIEPERNEAES-----RKAEAETEDGKRTT 459 (519)
Q Consensus 422 -~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 459 (519)
..++.++.++..++|+....+.-. .......+++...+
T Consensus 441 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~s~dg~~la 484 (814)
T 3mkq_A 441 SGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVM 484 (814)
T ss_dssp CSSSEEEEETTEEEEECTTTCCEEEEESSCEEEEEECTTSSEEE
T ss_pred cceEEEEecCCEEEEEECCcCcEEEEEecCCCEEEEcCCCCEEE
Confidence 366677788899999765432211 11344556666544
No 73
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-36 Score=288.16 Aligned_cols=293 Identities=15% Similarity=0.227 Sum_probs=233.7
Q ss_pred ecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC----------CCe
Q 010051 9 NWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC----------GGE 78 (519)
Q Consensus 9 ~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~ 78 (519)
...|...|++++|+|++++||+|+.||.|+|||+.+..... .....+..|...|.+++|+|+ ++.
T Consensus 63 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 137 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAI-----NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE 137 (416)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCC-----CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC
T ss_pred EEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccc-----cchhhccCCccceEEEEEcCCCCCEEEEEcCCCe
Confidence 35688999999999999999999999999999998721110 023346679999999999987 488
Q ss_pred EEEEEcccCCCcc---cceeeeccccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceEEEeccc------ccCe
Q 010051 79 LIIWKLHTTETGQ---AWKVLKNLSFHRKDVLDLQWSTD-GAFLLSGSVDNSCIIWDVNKGSVLQILDAH------FHYV 148 (519)
Q Consensus 79 i~vw~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h------~~~v 148 (519)
|++||+....... .......+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..| ...|
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 9999998764110 01122345679999999999999 789999999999999999999998888776 7899
Q ss_pred EEEEEcCCC-CeEEEeeCCC---eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecC-CCcceeeE
Q 010051 149 QGVAWDPLS-KYVASLSSDR---TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDE-TLPSFFRR 223 (519)
Q Consensus 149 ~~~~~~~~~-~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 223 (519)
.+++|+|++ .+|++++.|+ .|++||++..... +.... .+...|.+
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~------------------------------~~~~~~~~~~~v~~ 267 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP------------------------------LQTLNQGHQKGILS 267 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC------------------------------SBCCCSCCSSCEEE
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC------------------------------cEEeecCccCceeE
Confidence 999999997 6899999998 9999999875311 01111 35677999
Q ss_pred EEEcc-CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEE
Q 010051 224 LAWSP-DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLI 302 (519)
Q Consensus 224 ~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~ 302 (519)
++|+| ++.+|++++.+ +.+++||+... .++..+.+|...|.+++|+|++. .++
T Consensus 268 ~~~s~~~~~~l~s~~~d----------g~v~~wd~~~~-~~~~~~~~~~~~v~~~~~s~~~~---------------~~l 321 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGRD----------NTVLLWNPESA-EQLSQFPARGNWCFKTKFAPEAP---------------DLF 321 (416)
T ss_dssp EEECSSCSSCEEEEESS----------SEEEEECSSSC-CEEEEEECSSSCCCCEEECTTCT---------------TEE
T ss_pred EEeCCCCCCeEEEEeCC----------CCEEEeeCCCC-ccceeecCCCCceEEEEECCCCC---------------CEE
Confidence 99999 89999998877 69999998764 55677788999999999999873 247
Q ss_pred EEEecCCeEEEEeCCCCCceEEEe----------------c------------------cccccEEEEEEcCCCCEEEEE
Q 010051 303 FAIATLNSLYIYDTESVPPIAILA----------------G------------------LHYAAITDIAWSNNARYLALS 348 (519)
Q Consensus 303 ~~~~~d~~i~vwd~~~~~~~~~~~----------------~------------------~~~~~i~~~~~s~~g~~l~~~ 348 (519)
++++.|+.|++|++.+........ + .|..++++++|+|+|++|+++
T Consensus 322 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~ 401 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQIT 401 (416)
T ss_dssp EECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBC
T ss_pred EEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEe
Confidence 778888899999998765322110 0 145678899999999999999
Q ss_pred eCCCcEEEEEecCC
Q 010051 349 SQDGYCTLVEFEND 362 (519)
Q Consensus 349 ~~dg~i~vwd~~~~ 362 (519)
+.||.|+||++.+.
T Consensus 402 ~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 402 PDGKGVSITNPKIS 415 (416)
T ss_dssp TTSSCBCCBCCCCC
T ss_pred CCCCeEEEEEeccC
Confidence 99999999998764
No 74
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.5e-34 Score=272.79 Aligned_cols=282 Identities=17% Similarity=0.264 Sum_probs=226.1
Q ss_pred EEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCccccee
Q 010051 16 VLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKV 95 (519)
Q Consensus 16 V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~ 95 (519)
+..|+||++ ++||+|. |++|+|||..+++...
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~---------------------------------------------- 139 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQ---------------------------------------------- 139 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEE----------------------------------------------
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEE----------------------------------------------
Confidence 566888864 4777664 7888888887775322
Q ss_pred eeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecC
Q 010051 96 LKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANR 175 (519)
Q Consensus 96 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 175 (519)
+..+.+|...|++|+|+|+|++|++|+.||.|++||+.+++.+..+.+|...+.++.|+ +.+|++++.|+.+++||..
T Consensus 140 ~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 140 LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp EEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETT
T ss_pred EEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeec
Confidence 22334588899999999999999999999999999999999999999999999998875 6799999999999999987
Q ss_pred CCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEE
Q 010051 176 PTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIF 255 (519)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~ 255 (519)
..... +.....+...+..+.|+|++.++++++.+ +.+++|
T Consensus 218 ~~~~~------------------------------~~~~~~h~~~~~~~~~~~~g~~l~s~~~D----------~~v~i~ 257 (420)
T 4gga_A 218 VAEHH------------------------------VATLSGHSQEVCGLRWAPDGRHLASGGND----------NLVNVW 257 (420)
T ss_dssp SSSCE------------------------------EEEEECCSSCEEEEEECTTSSEEEEEETT----------SCEEEE
T ss_pred cccee------------------------------eEEecccccceeeeeecCCCCeeeeeecc----------ccceEE
Confidence 65321 11222456778899999999999998877 689999
Q ss_pred eccCCCc---ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEecccccc
Q 010051 256 SRKDLSR---PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAA 332 (519)
Q Consensus 256 ~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 332 (519)
+...... .......|...|.+++|+|.+..++ .+.+|+.|+.|++||+.++.++..+.. ...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~l-------------a~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~ 322 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL-------------ATGGGTSDRHIRIWNVCSGACLSAVDA--HSQ 322 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEE-------------EEEECTTTCEEEEEETTTTEEEEEEEC--SSC
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEE-------------EEEeecCCCEEEEEeCCccccceeecc--ccc
Confidence 9876542 3445678899999999999875431 122345789999999999999888875 567
Q ss_pred EEEEEEcCCCCEEEEEe--CCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCC
Q 010051 333 ITDIAWSNNARYLALSS--QDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 333 i~~~~~s~~g~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~ 408 (519)
+.++.|+++++.|++++ .|+.|+|||+.+++. ...+.+|. ..|.+++|+|||.+|++++.|+.| +|+..+
T Consensus 323 v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~--v~~l~gH~----~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 323 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK--VAELKGHT----SRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE--EEEECCCS----SCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE--EEEEcCCC----CCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 99999999999988865 789999999988754 34455654 689999999999999999999887 776544
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-35 Score=281.44 Aligned_cols=275 Identities=15% Similarity=0.197 Sum_probs=223.2
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CCeEEEEEc
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GGELIIWKL 84 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~ 84 (519)
..+....|+|++++||+|+.||.|+|||+.+++... .+..|...|.+++|+|+ ++.|++||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---------~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE---------IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE---------ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee---------ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 445555789999999999999999999998776543 24579999999999998 489999999
Q ss_pred ccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc---cccCeEEE----------
Q 010051 85 HTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA---HFHYVQGV---------- 151 (519)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~---------- 151 (519)
.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. |...|.++
T Consensus 169 ~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 169 KDG------SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp TTC------CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred CCC------cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 877 56677788999999999999999999999999999999999998888864 33444444
Q ss_pred -----------EEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcce
Q 010051 152 -----------AWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSF 220 (519)
Q Consensus 152 -----------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (519)
+|+|++++|++++.||.|++||+++++... .....+...
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~------------------------------~~~~~~~~~ 292 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI------------------------------QLPSKFTCS 292 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE------------------------------EECCTTSSC
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE------------------------------EcccccCCC
Confidence 457889999999999999999998764211 111235577
Q ss_pred eeEEEEccCCC-eEEEecCCcceeeeecccceEEEEeccCCCcccccCCC-CCCCeEEEEEcCCcccccccCCCCccccc
Q 010051 221 FRRLAWSPDGS-FLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPG-ASKPVVAVRFCPLAFNLRESNSAGFFKLP 298 (519)
Q Consensus 221 i~~~~~sp~g~-~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~g~~~~~ 298 (519)
|.+++|+|++. +|++++.+ +.+++||+.....++..+.. |...+.++.+. ++
T Consensus 293 v~~~~~~~~~~~~l~~g~~d----------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~--------------- 346 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYEN----------GMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AG--------------- 346 (420)
T ss_dssp EEEEEECSSCTTEEEEEETT----------SEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TT---------------
T ss_pred ceeEEEeCCCCCEEEEEeCC----------CeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CC---------------
Confidence 99999999999 88888776 69999999877665666655 66778888554 55
Q ss_pred ceEEEEEecCCeEEEEeCCCC---------CceEEEeccccccEEEEEEcCCCC---EEEEEeCCCcEEEEEecC
Q 010051 299 YRLIFAIATLNSLYIYDTESV---------PPIAILAGLHYAAITDIAWSNNAR---YLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 299 ~~~~~~~~~d~~i~vwd~~~~---------~~~~~~~~~~~~~i~~~~~s~~g~---~l~~~~~dg~i~vwd~~~ 361 (519)
+++++++.|+.|++|++... .....+.. |...|.+++|+|+++ .|++++.+|.+.+|++++
T Consensus 347 -~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 347 -ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVS-NDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp -EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECC-SSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred -CEEEEecCCccEEEEeccCCCCCccceeccCccEEcc-CCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 57888999999999998863 22234455 888999999999999 777888899999999864
No 76
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=261.79 Aligned_cols=279 Identities=22% Similarity=0.285 Sum_probs=223.3
Q ss_pred EEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CCeEEEEEccc
Q 010051 16 VLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GGELIIWKLHT 86 (519)
Q Consensus 16 V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~ 86 (519)
+.+|+||+++ +||+|. |++|+|||+.+++.+..+. +..|...|.+++|+|+ |+.|++|++.+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~-------~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQ-------MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEE-------CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEE-------ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC
Confidence 5789999886 777764 9999999999998765432 4568888999999997 58999999998
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceEEEecccccCeEEEEEcCCCCeEEEeeC
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKG-SVLQILDAHFHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 165 (519)
+ +.+..+.+|...+.++.+. +..|++++.++.+++|+...+ ..+..+.+|...+..+.+++++++|++++.
T Consensus 99 ~------~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 170 (318)
T 4ggc_A 99 Q------KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN 170 (318)
T ss_dssp T------EEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred c------eeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec
Confidence 7 7788888999988876654 779999999999999998876 456678899999999999999999999999
Q ss_pred CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeee
Q 010051 166 DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSM 245 (519)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~ 245 (519)
||.|++||+++++..... ......+...|..+.++|++..++....
T Consensus 171 d~~i~iwd~~~~~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~------- 216 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVP---------------------------LQTFTQHQGAVKAVAWCPWQSNVLATGG------- 216 (318)
T ss_dssp TSCEEEEESSCBTTBSCC---------------------------SEEECCCCSCEEEEEECTTSTTEEEEEE-------
T ss_pred CcceeEEECCCCcccccc---------------------------eeeecccCCceEEEEecCCCCcEEEEEe-------
Confidence 999999999876532111 1222344567889999998766553221
Q ss_pred ecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEE
Q 010051 246 SESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAIL 325 (519)
Q Consensus 246 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 325 (519)
....+.+++|+...... .....+...+..+.|+|++..+ .+++++.|+.|++||+.+++++..+
T Consensus 217 ~~~~~~i~lwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~--------------~~~sg~~d~~i~iwd~~~~~~~~~l 280 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGAC--LSAVDAHSQVCSILWSPHYKEL--------------ISGHGFAQNQLVIWKYPTMAKVAEL 280 (318)
T ss_dssp CTTTCEEEEEETTTCCE--EEEEECSSCEEEEEEETTTTEE--------------EEEECTTTCCEEEEETTTCCEEEEE
T ss_pred cCCCCEEEEEecccccc--cccccceeeeeeeeecccccce--------------EEEEEcCCCEEEEEECCCCcEEEEE
Confidence 11236899999875432 2334566789999999988542 1233447899999999999999999
Q ss_pred eccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 326 AGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 326 ~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
.+ |...|++++|+|+|++|++|+.||+|+|||+...
T Consensus 281 ~g-H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 281 KG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99 9999999999999999999999999999998653
No 77
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-34 Score=267.16 Aligned_cols=292 Identities=11% Similarity=0.153 Sum_probs=241.1
Q ss_pred ccccccCcceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 010051 58 NSLSYHGSAINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCI 128 (519)
Q Consensus 58 ~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 128 (519)
..+.+|...|.+++|+|+ ++.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.||.|+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG------ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc------hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 447789999999999998 478999999877 67788889999999999999999999999999999
Q ss_pred EEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCC-----CeEEEEecCCCCccccccccceeeEEEeccCcccccC
Q 010051 129 IWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSD-----RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDD 203 (519)
Q Consensus 129 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (519)
+||+.+++.+..+. |...|.+++|+|++++|++++.+ |.|++||+.............
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~---------------- 162 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS---------------- 162 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC----------------
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc----------------
Confidence 99999999988887 78899999999999999999998 999999998765322111100
Q ss_pred CccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCc
Q 010051 204 SKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLA 283 (519)
Q Consensus 204 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 283 (519)
...............+.+++|+|+++++++++.+ +.+++||+.........+..|...|.+++|+|++
T Consensus 163 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 163 --EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD----------GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp --SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT----------SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred --cceeeeccCCcCccceeEEEEcCCCCEEEEEcCC----------CEEEEEECCCCcEeEEEEecCCCceeEEEECCCC
Confidence 0000111111222378999999999999998777 6999999987667777788899999999999998
Q ss_pred ccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCC-----------
Q 010051 284 FNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDG----------- 352 (519)
Q Consensus 284 ~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg----------- 352 (519)
+++++++.|+.|++||+.+++.+..+. +...+..++|+|++++|++++.++
T Consensus 231 ----------------~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (369)
T 3zwl_B 231 ----------------TYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANE 292 (369)
T ss_dssp ----------------SEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-----------
T ss_pred ----------------CEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCC
Confidence 668888899999999999999888887 578899999999999999999988
Q ss_pred ---cEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCC
Q 010051 353 ---YCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 353 ---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~ 408 (519)
.+++||+.+++... .+.+| ...+.+++|+|++.+|++++.|+.+ +|+...
T Consensus 293 ~~~~i~~~d~~~~~~~~--~~~~~----~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 293 GKFEARFYHKIFEEEIG--RVQGH----FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp --CEEEEEETTTCCEEE--EEECC----SSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CcceeEEEecCCCcchh--heecc----cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 89999998875433 33333 3678999999999999999988877 665443
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-36 Score=286.58 Aligned_cols=286 Identities=16% Similarity=0.096 Sum_probs=210.0
Q ss_pred ecCCCCCEEEEEEecC------CCEEEEEcCCCcEEEEEecCCccccc--cccccccccccccCcceeEEEEccC-----
Q 010051 9 NWHDTKPVLTLDFHPI------SGLLATGGADYDIKIWLINSGEKQKK--IPTASYQNSLSYHGSAINILRFSPC----- 75 (519)
Q Consensus 9 ~~~h~~~V~~~~~sp~------~~~la~~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~----- 75 (519)
+.+|.+.|++++|+|+ +.+||+++.||+|+|||+..+..... .........+.+|...|.+++|+++
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~las 282 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVC 282 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEE
Confidence 4578899999999997 57999999999999999987653211 0111123356788999999999875
Q ss_pred ---CCeEEEEEcccCCCcccceeeeccccCCCCeEEE--EEcCCC-CEEEEEeCCCeEEEEEcCCCceEEEeccccc--C
Q 010051 76 ---GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDL--QWSTDG-AFLLSGSVDNSCIIWDVNKGSVLQILDAHFH--Y 147 (519)
Q Consensus 76 ---~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~--~ 147 (519)
||+|++||+.++. .....+.+|...|+++ +|++++ .+|++|+.|++|+|||+++++.+..+.+|.. .
T Consensus 283 gs~DgtV~lWD~~~~~-----~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPE-----VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp EETTSEEEEEETTBCS-----SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred EeCCCEEEEEECCCCC-----CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 6999999998652 2334567899999999 578888 8999999999999999999887777766653 5
Q ss_pred eEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 148 VQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 148 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
|.+++|+|+++.|++++.|++|++||++.+... .....|...|.+++|+
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~-------------------------------~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV-------------------------------HPLVSRETTITAIGVS 406 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCC-------------------------------EEEEECSSCEEEEECC
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccc-------------------------------eeeecCCCceEEEEeC
Confidence 889999999999999999999999999876421 0111356789999999
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCC-----CCCCeEEEEEcCCcccccccCCCCcccccceEE
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPG-----ASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLI 302 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~ 302 (519)
|+|++|++++.+ +.|++|+.... ....... +...+..++|+|++..+
T Consensus 407 p~g~~l~Sgs~D----------gtv~lwd~~~~--~~~~~~~~~~~~~~~~v~~v~~sp~g~~~---------------- 458 (524)
T 2j04_B 407 RLHPMVLAGSAD----------GSLIITNAARR--LLHGIKNSSATQKSLRLWKWDYSIKDDKY---------------- 458 (524)
T ss_dssp SSCCBCEEEETT----------TEEECCBSCSS--TTTCC------CCCCEEEECBCCSSSCEE----------------
T ss_pred CCCCeEEEEECC----------CEEEEEechHh--hccccccCccceeeeEEEEeccCCCCCeE----------------
Confidence 999999998887 79999997532 2221111 11246789999988422
Q ss_pred EEEecCCeEEEEeCC-CCCceEEEeccccccEEEEEEcCCCC---EEEEEeCCCcEEEEEecCC
Q 010051 303 FAIATLNSLYIYDTE-SVPPIAILAGLHYAAITDIAWSNNAR---YLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 303 ~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~i~~~~~s~~g~---~l~~~~~dg~i~vwd~~~~ 362 (519)
.... .+.+|+.. ++..+..+.+ |...|++++|+|++. +||+|+.||.|+||++...
T Consensus 459 -~~~~--~~~~~~~~~~g~~~~~l~g-h~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 459 -RIDS--SYEVYPLTVNDVSKAKIDA-HGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp -EECC--CCCCCC--------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred -EccC--CceecccccCCcceeeecC-CCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 1111 12233332 4667778888 999999999999964 9999999999999998754
No 79
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=269.46 Aligned_cols=287 Identities=17% Similarity=0.209 Sum_probs=221.9
Q ss_pred CeeEEecCCCCCEEEEEEecC---CCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEE
Q 010051 4 GTLQINWHDTKPVLTLDFHPI---SGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELI 80 (519)
Q Consensus 4 ~~~~~~~~h~~~V~~~~~sp~---~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 80 (519)
..+..+.+|.+.|++++|+|+ |++||+|+.||.|+|||+.+...
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~--------------------------------- 76 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ--------------------------------- 76 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------------------------------
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------------------------------
Confidence 456777899999999999999 59999999999999999986321
Q ss_pred EEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEE--cCCCC
Q 010051 81 IWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAW--DPLSK 158 (519)
Q Consensus 81 vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~ 158 (519)
.....+.+|...|++++|+|++++|++++.||.|++||+.+++.+. +..|...|.+++| +++++
T Consensus 77 -------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~ 142 (368)
T 3mmy_A 77 -------------TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS 142 (368)
T ss_dssp -------------EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE
T ss_pred -------------eeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCC
Confidence 1223445589999999999999999999999999999999988766 5679999999999 89999
Q ss_pred eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecC
Q 010051 159 YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAG 238 (519)
Q Consensus 159 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~ 238 (519)
+|++++.||.|++||+++++...... ....+.++.+. +..+++++.
T Consensus 143 ~l~~~~~dg~i~vwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~--~~~~~~~~~ 188 (368)
T 3mmy_A 143 CVMTGSWDKTLKFWDTRSSNPMMVLQ--------------------------------LPERCYCADVI--YPMAVVATA 188 (368)
T ss_dssp EEEEEETTSEEEEECSSCSSCSEEEE--------------------------------CSSCEEEEEEE--TTEEEEEEG
T ss_pred EEEEccCCCcEEEEECCCCcEEEEEe--------------------------------cCCCceEEEec--CCeeEEEeC
Confidence 99999999999999998865321111 11233344444 446666555
Q ss_pred CcceeeeecccceEEEEeccCCCcccccCC-CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC
Q 010051 239 SYKISSMSESINSAYIFSRKDLSRPALQLP-GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE 317 (519)
Q Consensus 239 ~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~ 317 (519)
+ +.+.+|++........... .+...+.++.+.++...- ...+++++.|+.|++|++.
T Consensus 189 ~----------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 189 E----------RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNK------------PTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp G----------GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSC------------EEEEEEEETTSEEEEEESS
T ss_pred C----------CcEEEEEeccccchhhhccccccCCCceEEEcccCCCC------------CCeEEEecCCCcEEEEecC
Confidence 5 6899999976544333322 334456666665544220 1348999999999999999
Q ss_pred CC---CceEEEeccccc------------cEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCC
Q 010051 318 SV---PPIAILAGLHYA------------AITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKS 382 (519)
Q Consensus 318 ~~---~~~~~~~~~~~~------------~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 382 (519)
.. ..+..+.. |.. .|++++|+|++++|++++.||.|++||+.+++... .+.+| ...+.
T Consensus 247 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~----~~~v~ 319 (368)
T 3mmy_A 247 PPNPAKDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK--TSEQL----DQPIS 319 (368)
T ss_dssp CSCHHHHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE--ECCCC----SSCEE
T ss_pred CCCccccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE--EecCC----CCCce
Confidence 87 56677777 665 79999999999999999999999999999875432 33333 46889
Q ss_pred cccccCCccEEEeecCCc
Q 010051 383 PLVTKSEDMIIEASTNDK 400 (519)
Q Consensus 383 ~~~~s~~~~~l~~~~~d~ 400 (519)
+++|+|++.+|++++.++
T Consensus 320 ~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EEEECTTSSCEEEEECCC
T ss_pred EEEECCCCCeEEEEeccc
Confidence 999999999999998875
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-34 Score=270.87 Aligned_cols=287 Identities=12% Similarity=0.094 Sum_probs=228.2
Q ss_pred ccccCcceeEEEEccC-------------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCC----CCEEEEEe
Q 010051 60 LSYHGSAINILRFSPC-------------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTD----GAFLLSGS 122 (519)
Q Consensus 60 ~~~~~~~v~~~~~~~~-------------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~ 122 (519)
..+|...|.+++|+|+ ++.|++|++.++.....+... ....|...|++++|+|+ +.+|++|+
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSY-VDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEE-ECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeec-cccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 4479999999999983 478999999876332211111 11236788999999998 67999999
Q ss_pred CCCeEEEEEcCCCceEEEecccccCeEEEEEcC-CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccc
Q 010051 123 VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDP-LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHST 201 (519)
Q Consensus 123 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (519)
.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||++.++... .+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~----------~~-------- 154 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVA----------IF-------- 154 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEE----------EE--------
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEE----------Ee--------
Confidence 999999999999999999999999999999999 89999999999999999998764211 00
Q ss_pred cCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcc------------------
Q 010051 202 DDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRP------------------ 263 (519)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~------------------ 263 (519)
.....+...|.+++|+|++.+|++++.+ +.+++||+......
T Consensus 155 ----------~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (366)
T 3k26_A 155 ----------GGVEGHRDEVLSADYDLLGEKIMSCGMD----------HSLKLWRINSKRMMNAIKESYDYNPNKTNRPF 214 (366)
T ss_dssp ----------CSTTSCSSCEEEEEECTTSSEEEEEETT----------SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCC
T ss_pred ----------cccccccCceeEEEECCCCCEEEEecCC----------CCEEEEECCCCccccccceeEEecCCCCcccc
Confidence 0013466789999999999999998877 68999998754211
Q ss_pred ---------cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCc-------------
Q 010051 264 ---------ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPP------------- 321 (519)
Q Consensus 264 ---------~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~------------- 321 (519)
......|...|.+++|+ + +++++++.|+.|++||+.++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~----------------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 276 (366)
T 3k26_A 215 ISQKIHFPDFSTRDIHRNYVDCVRWL--G----------------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVT 276 (366)
T ss_dssp CCEEECCCSEEECSSCSSCCCEEEEE--T----------------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEE
T ss_pred cceeeccCccccccCCcceEEEEEEc--C----------------CEEEEEecCCEEEEEeCCCccccccccccCCcchh
Confidence 11222388899999998 3 5688999999999999987754
Q ss_pred -eEEEeccccccEEEEEEcCC--CCEEEEEeCCCcEEEEEecCCcccc--eeeecCCcccccCCCCcccccCCccEEEee
Q 010051 322 -IAILAGLHYAAITDIAWSNN--ARYLALSSQDGYCTLVEFENDELGI--PISLSGNKVSKDENKSPLVTKSEDMIIEAS 396 (519)
Q Consensus 322 -~~~~~~~~~~~i~~~~~s~~--g~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 396 (519)
+..+.. |...|++++|+|+ +++|++++.||.|++||+..++... ...+.++. +...+.+++|+|++.+|+++
T Consensus 277 ~~~~~~~-~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~ 353 (366)
T 3k26_A 277 ILGRFDY-SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHK--CGAAIRQTSFSRDSSILIAV 353 (366)
T ss_dssp EEEEEEC-SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTT--CCSCEEEEEECTTSSEEEEE
T ss_pred eeccccc-cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccc--cCCceEEEEeCCCCCeEEEE
Confidence 667777 8899999999999 9999999999999999999876433 22333332 24689999999999999999
Q ss_pred cCCcee-eecC
Q 010051 397 TNDKLV-TAET 406 (519)
Q Consensus 397 ~~d~~i-~~~~ 406 (519)
+.|+.+ +|+.
T Consensus 354 ~~dg~i~iwd~ 364 (366)
T 3k26_A 354 CDDASIWRWDR 364 (366)
T ss_dssp ETTSEEEEEEC
T ss_pred eCCCEEEEEEe
Confidence 998877 6653
No 81
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6e-35 Score=265.64 Aligned_cols=266 Identities=19% Similarity=0.177 Sum_probs=200.0
Q ss_pred ccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eEEEecccccCeEEEEEcC--CCCeEEEeeCCCeEEEEe
Q 010051 98 NLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS--VLQILDAHFHYVQGVAWDP--LSKYVASLSSDRTCRIYA 173 (519)
Q Consensus 98 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd 173 (519)
.+.+|...|++++|+|+|++|++|+.|++|++||+.++. .+..+.+|...|.+++|++ ++++|++++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 356799999999999999999999999999999998875 4677899999999999986 489999999999999999
Q ss_pred cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC--CCeEEEecCCcceeeeecccce
Q 010051 174 NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD--GSFLLVPAGSYKISSMSESINS 251 (519)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~~~~~~~~~~~~~~ 251 (519)
++++.... ......|...|.+++|+|+ +.+|++++.+ +.
T Consensus 88 ~~~~~~~~-----------------------------~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D----------~~ 128 (316)
T 3bg1_A 88 EENGTWEK-----------------------------SHEHAGHDSSVNSVCWAPHDYGLILACGSSD----------GA 128 (316)
T ss_dssp CSSSCCCE-----------------------------EEEECCCSSCCCEEEECCTTTCSCEEEECSS----------SC
T ss_pred CCCCcceE-----------------------------EEEccCCCCceEEEEECCCCCCcEEEEEcCC----------CC
Confidence 98653110 1112345678999999998 7899998877 69
Q ss_pred EEEEeccCCCc--ccccCCCCCCCeEEEEEcCCccccc-ccCCCCcccccceEEEEEecCCeEEEEeCCCC---CceEEE
Q 010051 252 AYIFSRKDLSR--PALQLPGASKPVVAVRFCPLAFNLR-ESNSAGFFKLPYRLIFAIATLNSLYIYDTESV---PPIAIL 325 (519)
Q Consensus 252 i~i~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~---~~~~~~ 325 (519)
+++|++..... ....+.+|...+.++.|+|++..-. .....+.......++++++.|+.|++||+... +++..+
T Consensus 129 i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 99999976432 2455678999999999999842100 00001100011257899999999999999755 355667
Q ss_pred eccccccEEEEEEcCCC----CEEEEEeCCCcEEEEEecCCccc--ceeeecCCcccccCCCCcccccCCccEEEeecCC
Q 010051 326 AGLHYAAITDIAWSNNA----RYLALSSQDGYCTLVEFENDELG--IPISLSGNKVSKDENKSPLVTKSEDMIIEASTND 399 (519)
Q Consensus 326 ~~~~~~~i~~~~~s~~g----~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d 399 (519)
.+ |...|++++|+|++ ++|++++.||+|++|++...... ....+..+ ...+.+++|+|++.+|++++.|
T Consensus 209 ~~-h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~----~~~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 209 EA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF----NDVVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp BC-CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC----SSCEEEEEECTTTCCEEEEESS
T ss_pred cc-CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC----CCcEEEEEEcCCCCEEEEEcCC
Confidence 77 99999999999987 89999999999999999863211 11112222 4688999999999999999988
Q ss_pred cee-eecCC
Q 010051 400 KLV-TAETK 407 (519)
Q Consensus 400 ~~i-~~~~~ 407 (519)
+.+ +|+..
T Consensus 284 ~~v~lw~~~ 292 (316)
T 3bg1_A 284 NKVTLWKES 292 (316)
T ss_dssp SCEEEEEEC
T ss_pred CeEEEEEEC
Confidence 877 67643
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.6e-33 Score=267.32 Aligned_cols=277 Identities=21% Similarity=0.283 Sum_probs=232.6
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC------- 75 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------- 75 (519)
+..+..+.+|.+.|++++|+ +++|++|+.||.|++||+.+++.... +.+|...|.++.|++.
T Consensus 149 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~---------~~~h~~~v~~~~~~~~~l~s~s~ 217 (445)
T 2ovr_B 149 GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT---------LYGHTSTVRCMHLHEKRVVSGSR 217 (445)
T ss_dssp CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE---------ECCCSSCEEEEEEETTEEEEEET
T ss_pred CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE---------ECCCCCcEEEEEecCCEEEEEeC
Confidence 45666778899999999998 67999999999999999998875543 5568888998888765
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcC
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDP 155 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 155 (519)
++.|++||+.++ +.+..+.+|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.++.|
T Consensus 218 dg~i~~wd~~~~------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-- 287 (445)
T 2ovr_B 218 DATLRVWDIETG------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-- 287 (445)
T ss_dssp TSEEEEEESSSC------CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--
T ss_pred CCEEEEEECCCC------cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--
Confidence 799999999877 567778889999999999 6889999999999999999999999999999999999999
Q ss_pred CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEE
Q 010051 156 LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLV 235 (519)
Q Consensus 156 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~ 235 (519)
++.+|++++.||.|++||+++++.. .....+...+.++.+ ++.++++
T Consensus 288 ~~~~l~~~~~d~~i~i~d~~~~~~~-------------------------------~~~~~~~~~v~~~~~--~~~~l~~ 334 (445)
T 2ovr_B 288 DGIHVVSGSLDTSIRVWDVETGNCI-------------------------------HTLTGHQSLTSGMEL--KDNILVS 334 (445)
T ss_dssp CSSEEEEEETTSCEEEEETTTCCEE-------------------------------EEECCCCSCEEEEEE--ETTEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEE-------------------------------EEEcCCcccEEEEEE--eCCEEEE
Confidence 7899999999999999999876521 111133445556665 5678888
Q ss_pred ecCCcceeeeecccceEEEEeccCCCcccccCCC---CCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 236 PAGSYKISSMSESINSAYIFSRKDLSRPALQLPG---ASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 236 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
++.+ +.+++||+... .....+.. |...|.+++|++ +++++++.||.|+
T Consensus 335 ~~~d----------g~i~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~------------------~~l~s~~~dg~v~ 385 (445)
T 2ovr_B 335 GNAD----------STVKIWDIKTG-QCLQTLQGPNKHQSAVTCLQFNK------------------NFVITSSDDGTVK 385 (445)
T ss_dssp EETT----------SCEEEEETTTC-CEEEEECSTTSCSSCEEEEEECS------------------SEEEEEETTSEEE
T ss_pred EeCC----------CeEEEEECCCC-cEEEEEccCCCCCCCEEEEEECC------------------CEEEEEeCCCeEE
Confidence 8777 69999999754 33444443 888999999975 5689999999999
Q ss_pred EEeCCCCCceEEEe----ccccccEEEEEEcCCCCEEEEEeCCCc----EEEEEecCC
Q 010051 313 IYDTESVPPIAILA----GLHYAAITDIAWSNNARYLALSSQDGY----CTLVEFEND 362 (519)
Q Consensus 313 vwd~~~~~~~~~~~----~~~~~~i~~~~~s~~g~~l~~~~~dg~----i~vwd~~~~ 362 (519)
+||+.+++.+..+. ..|.+.|++++|+|++.+|++++.||+ |.|||+...
T Consensus 386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99999999988883 227889999999999999999999998 999999753
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.3e-34 Score=271.78 Aligned_cols=283 Identities=10% Similarity=0.121 Sum_probs=215.6
Q ss_pred cccccCcceeEEEEccC----------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC-CCCEEEEEeCCCeE
Q 010051 59 SLSYHGSAINILRFSPC----------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST-DGAFLLSGSVDNSC 127 (519)
Q Consensus 59 ~~~~~~~~v~~~~~~~~----------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i 127 (519)
....|...|++|+|+|. ||.|+|||+..... .....+.+|...|++|+|+| ++.+|++|+.||+|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 45568888999999985 58999999986632 34456678999999999998 68999999999999
Q ss_pred EEEEcCCCceEEEecc--cccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCc
Q 010051 128 IIWDVNKGSVLQILDA--HFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSK 205 (519)
Q Consensus 128 ~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (519)
++||++++........ +...+.+++|+|++++|++|+.||.|++||++....
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~-------------------------- 243 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL-------------------------- 243 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC--------------------------
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee--------------------------
Confidence 9999987654433333 334678999999999999999999999999865321
Q ss_pred cccceeeecCCCcceeeEEEEccCCCe-EEEecCCcceeeeecccceEEEEeccCCCc--ccccCCCCCCCeEEEEEcCC
Q 010051 206 SAKNHLFHDETLPSFFRRLAWSPDGSF-LLVPAGSYKISSMSESINSAYIFSRKDLSR--PALQLPGASKPVVAVRFCPL 282 (519)
Q Consensus 206 ~~~~~~~~~~~~~~~i~~~~~sp~g~~-l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~--~~~~~~~~~~~v~~~~~sp~ 282 (519)
.....|...|.+++|+|++.. +++++.+ +.|++||++.... ......+|...|++++|+|+
T Consensus 244 ------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d----------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spd 307 (435)
T 4e54_B 244 ------WNLRMHKKKVTHVALNPCCDWFLATASVD----------QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD 307 (435)
T ss_dssp ------CCSBCCSSCEEEEEECTTCSSEEEEEETT----------SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTT
T ss_pred ------EEEecccceEEeeeecCCCceEEEEecCc----------ceeeEEecccccccceEEEeeeccccccceeECCC
Confidence 112245678999999999875 5555555 6899999976543 23345679999999999999
Q ss_pred cccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccc------cEEEEEEcCCCCEEEEEe-------
Q 010051 283 AFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYA------AITDIAWSNNARYLALSS------- 349 (519)
Q Consensus 283 ~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------~i~~~~~s~~g~~l~~~~------- 349 (519)
| .+|++++.|+.|++||+.++.....+.. |.. .+..+.|+|++.++++++
T Consensus 308 g----------------~~l~s~~~D~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 370 (435)
T 4e54_B 308 G----------------ARLLTTDQKSEIRVYSASQWDCPLGLIP-HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFK 370 (435)
T ss_dssp S----------------SEEEEEESSSCEEEEESSSSSSEEEECC-CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSC
T ss_pred C----------------CeeEEEcCCCEEEEEECCCCccceEEec-ccccccccceeEEEEEcCCCCEEEEEEcCCCCeE
Confidence 8 6688999999999999999988877765 432 234567888877777764
Q ss_pred -----CCCcEEEEEecCCcccceeeecCCcccccCCCCcc-cccCCccEEEeecCCceeeecCCCC
Q 010051 350 -----QDGYCTLVEFENDELGIPISLSGNKVSKDENKSPL-VTKSEDMIIEASTNDKLVTAETKEP 409 (519)
Q Consensus 350 -----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~l~~~~~d~~i~~~~~~~ 409 (519)
.++.|++||+.+++....+. .+| ...+.++ +|+|+|.+|++++++.+.+|+..+.
T Consensus 371 ~~~~~~~~~i~iwd~~~g~~~~~l~-~~~----~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~g 431 (435)
T 4e54_B 371 SCTPYELRTIDVFDGNSGKMMCQLY-DPE----SSGISSLNEFNPMGDTLASAMGYHILIWSQQEA 431 (435)
T ss_dssp CSSTTCCCCEEEECSSSCCEEEEEC-CSS----CCCCCCEEEECTTSSCEEEECSSEEEECCCC--
T ss_pred EEEecCCCEEEEEECCCCcEEEEEe-CCC----CCcEEEEEEECCCCCEEEEEcCCcEEEEECCcC
Confidence 23579999998876433321 122 3466776 6999999999999877778886654
No 84
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-33 Score=265.43 Aligned_cols=281 Identities=10% Similarity=0.139 Sum_probs=217.4
Q ss_pred ccccccccCcceeEEEEccCC----------CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC-CCCEEEEEeCC
Q 010051 56 YQNSLSYHGSAINILRFSPCG----------GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST-DGAFLLSGSVD 124 (519)
Q Consensus 56 ~~~~~~~~~~~v~~~~~~~~~----------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d 124 (519)
....+.+|...|.+++|+|++ +.|+|||+.+... .....+.+|...|.+++|+| ++.+|++++.|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK----TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC----EEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc----ceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 344577899999999999985 8899999987632 23333457999999999999 78999999999
Q ss_pred CeEEEEEcCCCceEEEecc---cccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccc
Q 010051 125 NSCIIWDVNKGSVLQILDA---HFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHST 201 (519)
Q Consensus 125 g~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (519)
+.|++||+.+ ..+..+.. |...|.+++|+|++++|++++.||.|++||++...
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----------------------- 196 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHE----------------------- 196 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCE-----------------------
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCE-----------------------
Confidence 9999999986 44555544 44789999999999999999999999999984321
Q ss_pred cCCccccceeeecCCCcceeeEEEEccCCC-eEEEecCCcceeeeecccceEEEEeccCCC---cccccCCCCCCCeEEE
Q 010051 202 DDSKSAKNHLFHDETLPSFFRRLAWSPDGS-FLLVPAGSYKISSMSESINSAYIFSRKDLS---RPALQLPGASKPVVAV 277 (519)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~---~~~~~~~~~~~~v~~~ 277 (519)
+.....+...|.+++|+|+++ ++++++.+ +.+++||+.... .....+ +|...|.++
T Consensus 197 ---------~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~ 256 (383)
T 3ei3_B 197 ---------IFKEKLHKAKVTHAEFNPRCDWLMATSSVD----------ATVKLWDLRNIKDKNSYIAEM-PHEKPVNAA 256 (383)
T ss_dssp ---------EEEEECSSSCEEEEEECSSCTTEEEEEETT----------SEEEEEEGGGCCSTTCEEEEE-ECSSCEEEE
T ss_pred ---------EEEeccCCCcEEEEEECCCCCCEEEEEeCC----------CEEEEEeCCCCCcccceEEEe-cCCCceEEE
Confidence 111224567899999999999 78887766 699999998632 223333 689999999
Q ss_pred EEcC-CcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEecccc-----------------ccEEEEEEc
Q 010051 278 RFCP-LAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHY-----------------AAITDIAWS 339 (519)
Q Consensus 278 ~~sp-~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-----------------~~i~~~~~s 339 (519)
+|+| ++ .++++++.|+.|++||+.+++.+..+.. |. ..+..++|+
T Consensus 257 ~~s~~~~----------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~s 319 (383)
T 3ei3_B 257 YFNPTDS----------------TKLLTTDQRNEIRVYSSYDWSKPDQIII-HPHRQFQHLTPIKATWHPMYDLIVAGRY 319 (383)
T ss_dssp EECTTTS----------------CEEEEEESSSEEEEEETTBTTSCSEEEE-CCBCCCTTSCCCCCEECSSSSEEEEECB
T ss_pred EEcCCCC----------------CEEEEEcCCCcEEEEECCCCcccccccc-ccccccccccceEEeccCCCCceEEEec
Confidence 9999 88 6688889999999999999888777765 42 344456777
Q ss_pred CCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeecCC
Q 010051 340 NNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETK 407 (519)
Q Consensus 340 ~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~ 407 (519)
|+|++ +++.||.|++||+.+++....+. ++. ....+..++|+|++.+|++++++.+.+|+..
T Consensus 320 ~dg~~--s~s~d~~i~iwd~~~~~~~~~l~--~~~--~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~ 381 (383)
T 3ei3_B 320 PDDQL--LLNDKRTIDIYDANSGGLVHQLR--DPN--AAGIISLNKFSPTGDVLASGMGFNILIWNRE 381 (383)
T ss_dssp CCTTT--CTTCCCCEEEEETTTCCEEEEEC--BTT--BCSCCCEEEECTTSSEEEEEETTEEEEEECC
T ss_pred CCccc--ccCCCCeEEEEecCCCceeeeec--CCC--CCceEEEEEEecCccEEEEecCCcEEEEecC
Confidence 77766 77899999999998886544333 222 1346667799999999999985555577654
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.7e-33 Score=255.84 Aligned_cols=284 Identities=17% Similarity=0.169 Sum_probs=228.4
Q ss_pred eeeeccccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCc-----eEEEecccccCeEEEEEcCCCCeEEEeeCCC
Q 010051 94 KVLKNLSFHRKDVLDLQWSTD-GAFLLSGSVDNSCIIWDVNKGS-----VLQILDAHFHYVQGVAWDPLSKYVASLSSDR 167 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg 167 (519)
....+|.+|.+.|++|+|+|+ +++|++|+.|++|+|||+.+++ +...+.+|...|.+++|+|++++|++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 455678999999999999997 6899999999999999997653 4667889999999999999999999999999
Q ss_pred eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeec
Q 010051 168 TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSE 247 (519)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~ 247 (519)
.|++|+....... .........+..+.+++++.++++++.+
T Consensus 109 ~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~l~s~s~d-------- 149 (340)
T 4aow_A 109 TLRLWDLTTGTTT-------------------------------RRFVGHTKDVLSVAFSSDNRQIVSGSRD-------- 149 (340)
T ss_dssp EEEEEETTTTEEE-------------------------------EEEECCSSCEEEEEECTTSSCEEEEETT--------
T ss_pred cceEEeeccccee-------------------------------eeecCCCCceeEEEEeecCccceeecCC--------
Confidence 9999998775421 1111234556688999999999998877
Q ss_pred ccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 248 SINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 248 ~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
+.+++||............+|...+..++|++++.. .++++++.|+.|++||+.+++.+..+.+
T Consensus 150 --~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------------~~~~s~~~d~~i~i~d~~~~~~~~~~~~ 213 (340)
T 4aow_A 150 --KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN--------------PIIVSCGWDKLVKVWNLANCKLKTNHIG 213 (340)
T ss_dssp --SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS--------------CEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred --CeEEEEEeCCCceEEEEeccccCcccceEEccCCCC--------------cEEEEEcCCCEEEEEECCCCceeeEecC
Confidence 689999987766666777889999999999987643 4678899999999999999999999998
Q ss_pred cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeecCC
Q 010051 328 LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETK 407 (519)
Q Consensus 328 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~ 407 (519)
|...|++++|+|++++|++++.||.|++||+.+......+. . ...+..+.|+|++.+++++.++.+.+|+..
T Consensus 214 -h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~-----~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 214 -HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--G-----GDIINALCFSPNRYWLCAATGPSIKIWDLE 285 (340)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--C-----SSCEEEEEECSSSSEEEEEETTEEEEEETT
T ss_pred -CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--C-----CceEEeeecCCCCceeeccCCCEEEEEECC
Confidence 99999999999999999999999999999998875433322 2 346788999999988887777666688755
Q ss_pred CCCcc------------------c-cccccCCCceEEeccccceeeeecccc
Q 010051 408 EPDKR------------------K-TEAETKDDETAINGSIAAESRLIEPER 440 (519)
Q Consensus 408 ~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (519)
..... + .....++...+++++.|+.+++|+...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 286 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp TTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred CCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 32211 0 011234556777888888888886543
No 86
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=264.84 Aligned_cols=284 Identities=11% Similarity=0.124 Sum_probs=220.9
Q ss_pred ccccCcceeEEEEccC-------------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCC---CCEEEEEeC
Q 010051 60 LSYHGSAINILRFSPC-------------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTD---GAFLLSGSV 123 (519)
Q Consensus 60 ~~~~~~~v~~~~~~~~-------------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~ 123 (519)
+.+|...|.+++|+|+ ++.|+||++.++.. ......+|...|.+++|+|+ +.+|++|+.
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL-----KLLREIEKAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE-----EEEEEEEESSCEEEEECTTCCTTTCCEEEEET
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc-----cceeeecccCcEEEEEEcCCCCCCceEEEecC
Confidence 4568889999999885 36799999987631 11222368999999999998 699999999
Q ss_pred CCeEEEEEcCCCc-eEEEecccccCeEEEEE------cCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEecc
Q 010051 124 DNSCIIWDVNKGS-VLQILDAHFHYVQGVAW------DPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKA 196 (519)
Q Consensus 124 dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 196 (519)
||.|++||+.+++ .+..+.+|...|.++.| +|++++|++++.||.|++||+...+.... .+.
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~---------~~~-- 157 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA---------NME-- 157 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE---------EEC--
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce---------ecc--
Confidence 9999999999988 88889999999999955 68899999999999999999987641100 000
Q ss_pred CcccccCCccccceeeecCCCcceeeEEE----EccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCC
Q 010051 197 GQHSTDDSKSAKNHLFHDETLPSFFRRLA----WSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASK 272 (519)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 272 (519)
.........+.+++ |+|++.++++++.+ +.+++||+..... .....|..
T Consensus 158 ---------------~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~--~~~~~~~~ 210 (357)
T 3i2n_A 158 ---------------PVQGENKRDCWTVAFGNAYNQEERVVCAGYDN----------GDIKLFDLRNMAL--RWETNIKN 210 (357)
T ss_dssp ---------------CCTTSCCCCEEEEEEECCCC-CCCEEEEEETT----------SEEEEEETTTTEE--EEEEECSS
T ss_pred ---------------ccCCCCCCceEEEEEEeccCCCCCEEEEEccC----------CeEEEEECccCce--eeecCCCC
Confidence 00011123566777 78999999998877 6999999976543 33456788
Q ss_pred CeEEEEEcC---CcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEe-----ccccccEEEEEEcCCCC-
Q 010051 273 PVVAVRFCP---LAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILA-----GLHYAAITDIAWSNNAR- 343 (519)
Q Consensus 273 ~v~~~~~sp---~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~-----~~~~~~i~~~~~s~~g~- 343 (519)
.|.+++|+| ++ .++++++.|+.|++||+.+++.+..+. + |...|++++|+|+++
T Consensus 211 ~v~~~~~~~~~~~~----------------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 273 (357)
T 3i2n_A 211 GVCSLEFDRKDISM----------------NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA-HKSTVWQVRHLPQNRE 273 (357)
T ss_dssp CEEEEEESCSSSSC----------------CEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC-CSSCEEEEEEETTEEE
T ss_pred ceEEEEcCCCCCCC----------------CEEEEECCCCeEEEEeCcCCCcccceeeeccCC-CcCCEEEEEECCCCCc
Confidence 999999999 66 668889999999999998877665554 6 999999999999998
Q ss_pred EEEEEeCCCcEEEEEecCCcccc-----------------eeeecCCcccccCCCCcccccCCccEEE-eecCCcee-ee
Q 010051 344 YLALSSQDGYCTLVEFENDELGI-----------------PISLSGNKVSKDENKSPLVTKSEDMIIE-ASTNDKLV-TA 404 (519)
Q Consensus 344 ~l~~~~~dg~i~vwd~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~~~~d~~i-~~ 404 (519)
+|++++.||.|++||+....... ...+.+ +...+.+++|+|++.+|+ +++.|+.+ +|
T Consensus 274 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 274 LFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL----STQPISSLDWSPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp EEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC----CSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred EEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc----CCCCeeEEEEcCCCCeEEEEecCCCcEEEE
Confidence 89999999999999998754321 122222 346889999999999998 78877777 66
Q ss_pred cCC
Q 010051 405 ETK 407 (519)
Q Consensus 405 ~~~ 407 (519)
+..
T Consensus 350 ~~~ 352 (357)
T 3i2n_A 350 IVT 352 (357)
T ss_dssp EEC
T ss_pred ECC
Confidence 654
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=291.31 Aligned_cols=254 Identities=19% Similarity=0.263 Sum_probs=210.4
Q ss_pred eEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 6 LQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
+.++.+|.+.|++++|+|++++|++|+.||.|+|||+..+..
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-------------------------------------- 43 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-------------------------------------- 43 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE--------------------------------------
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC--------------------------------------
Confidence 356789999999999999999999999999999999874321
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCc--eEEEecccccCeEEEEEcCC--CCe
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTD--GAFLLSGSVDNSCIIWDVNKGS--VLQILDAHFHYVQGVAWDPL--SKY 159 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~ 159 (519)
.....+.+|...|++++|+|+ +++|++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ +++
T Consensus 44 --------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~ 115 (753)
T 3jro_A 44 --------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL 115 (753)
T ss_dssp --------EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE
T ss_pred --------ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCE
Confidence 344556679999999999988 9999999999999999999987 67778899999999999999 999
Q ss_pred EEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-----------
Q 010051 160 VASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP----------- 228 (519)
Q Consensus 160 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp----------- 228 (519)
|++++.||.|++||++....... .....+...|.+++|+|
T Consensus 116 l~sgs~dg~I~vwdl~~~~~~~~-----------------------------~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 116 LLVASSDGKVSVVEFKENGTTSP-----------------------------IIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp EEEEETTSEEEEEECCSSSCCCC-----------------------------EEEECCSSCEEEEEECCCC---------
T ss_pred EEEEeCCCcEEEEEeecCCCcce-----------------------------eEeecCCCceEEEEecCccccccccccc
Confidence 99999999999999987642111 11124567799999999
Q ss_pred --CCCeEEEecCCcceeeeecccceEEEEeccCCC---cccccCCCCCCCeEEEEEcCC---cccccccCCCCcccccce
Q 010051 229 --DGSFLLVPAGSYKISSMSESINSAYIFSRKDLS---RPALQLPGASKPVVAVRFCPL---AFNLRESNSAGFFKLPYR 300 (519)
Q Consensus 229 --~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~---~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~~g~~~~~~~ 300 (519)
++.++++++.+ +.|++||++... .....+.+|...|++++|+|+ + .
T Consensus 167 ~~d~~~l~sgs~d----------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~----------------~ 220 (753)
T 3jro_A 167 TKESRKFVTGGAD----------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR----------------S 220 (753)
T ss_dssp CGGGCCEEEEETT----------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS----------------E
T ss_pred CCCCCEEEEEECC----------CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCC----------------C
Confidence 58899998877 689999997654 344567789999999999998 6 6
Q ss_pred EEEEEecCCeEEEEeCCCCC-----ceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 301 LIFAIATLNSLYIYDTESVP-----PIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 301 ~~~~~~~d~~i~vwd~~~~~-----~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
++++++.||.|++||+.++. ....... |...|++++|+|+|++|++++.||.|++|++..
T Consensus 221 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~-~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 221 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEEESSSCEEEEEESSSSSCCBCCBSSSSC-CSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEEEecCCEEEEecCCCCCCcceeEEeccCC-CCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 78999999999999998864 2233334 788999999999999999999999999999984
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=275.97 Aligned_cols=313 Identities=13% Similarity=0.159 Sum_probs=226.6
Q ss_pred EEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccc-cccCcceeEEEEcc-C---------CCeEEEEEcccCC
Q 010051 20 DFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSL-SYHGSAINILRFSP-C---------GGELIIWKLHTTE 88 (519)
Q Consensus 20 ~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~---------~~~i~vw~~~~~~ 88 (519)
.|+|++..+++++ .|+. +++.+. .+ .+|...|++++|+| + |+.|+|||+....
T Consensus 34 ~f~~~~~~~~~~~------~w~~-~g~~~~---------~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~ 97 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNL-RGKLIA---------TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEII 97 (437)
T ss_dssp GGCCCCCCCCCCC------GGGC-CCCEEE---------EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHH
T ss_pred hcCCccccccccc------cccc-cceEEe---------eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccc
Confidence 3677777777665 3653 333332 34 67999999999999 6 5899999998732
Q ss_pred CcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC---CCceEEEecc------------cccCeEEEE-
Q 010051 89 TGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVN---KGSVLQILDA------------HFHYVQGVA- 152 (519)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~------------h~~~v~~~~- 152 (519)
....+.....+ +|...|++++|+|++++|++|+.||.|++||+. +++....+.. +...+.++.
T Consensus 98 ~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 176 (437)
T 3gre_A 98 VGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRA 176 (437)
T ss_dssp TTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEE
T ss_pred cCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEE
Confidence 22111222222 489999999999999999999999999999995 5555443332 445566666
Q ss_pred -EcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCC
Q 010051 153 -WDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGS 231 (519)
Q Consensus 153 -~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 231 (519)
+++++.+|++++.||.|++||+++++... .+....+...|.+++|+|++.
T Consensus 177 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-----------------------------~~~~~~h~~~v~~~~~s~~~~ 227 (437)
T 3gre_A 177 FVNEEKSLLVALTNLSRVIIFDIRTLERLQ-----------------------------IIENSPRHGAVSSICIDEECC 227 (437)
T ss_dssp EECSSCEEEEEEETTSEEEEEETTTCCEEE-----------------------------EEECCGGGCCEEEEEECTTSC
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCeeeE-----------------------------EEccCCCCCceEEEEECCCCC
Confidence 55789999999999999999998865211 111112567899999999999
Q ss_pred eEEEecCCcceeeeecccceEEEEeccCCCcccccCC-CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCe
Q 010051 232 FLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLP-GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNS 310 (519)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~ 310 (519)
+|++++.+ +.|++||++.. .++..+. .|...|.+++|+|... .++ .++++++.|+.
T Consensus 228 ~l~s~~~d----------g~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s------~~~------~~l~s~~~dg~ 284 (437)
T 3gre_A 228 VLILGTTR----------GIIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYG------KNS------VIVVGGSSKTF 284 (437)
T ss_dssp EEEEEETT----------SCEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTC------TTE------EEEEEESTTEE
T ss_pred EEEEEcCC----------CeEEEEEcCCc-cEEEEEecCCCCceEEEEeccccC------CCc------cEEEEEcCCCc
Confidence 99998887 68999999763 4444443 6778999997776421 011 67899999999
Q ss_pred EEEEeCCCCCceEEEecc-------------------------ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccc
Q 010051 311 LYIYDTESVPPIAILAGL-------------------------HYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELG 365 (519)
Q Consensus 311 i~vwd~~~~~~~~~~~~~-------------------------~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~ 365 (519)
|++||+.+++.+..+.+. |...|++++|+ ++++|++++.||.|++||+.+++..
T Consensus 285 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 285 LTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp EEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred EEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccc
Confidence 999999999988888741 55668899999 7799999999999999999987654
Q ss_pred ceeeecCCc-------------------------------ccccCCCCcccccCC--ccEEEeecCCcee
Q 010051 366 IPISLSGNK-------------------------------VSKDENKSPLVTKSE--DMIIEASTNDKLV 402 (519)
Q Consensus 366 ~~~~~~~~~-------------------------------~~~~~~~~~~~~s~~--~~~l~~~~~d~~i 402 (519)
..+...... ..+...|.+++|+++ +.+|++++.|+.|
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I 433 (437)
T 3gre_A 364 KAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLI 433 (437)
T ss_dssp EEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCE
T ss_pred eEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceE
Confidence 443321000 013456777777776 6677777777766
No 89
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-32 Score=262.76 Aligned_cols=280 Identities=19% Similarity=0.278 Sum_probs=226.8
Q ss_pred EecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccC
Q 010051 8 INWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTT 87 (519)
Q Consensus 8 ~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~ 87 (519)
...+|...|+|++| ++++|++|+.||.|+|||+.+++.
T Consensus 128 ~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~---------------------------------------- 165 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLEC---------------------------------------- 165 (435)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCE----------------------------------------
T ss_pred cccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeE----------------------------------------
Confidence 34567788999887 699999999999999999876653
Q ss_pred CCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCC
Q 010051 88 ETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDR 167 (519)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg 167 (519)
...+.+|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +..|++++.||
T Consensus 166 --------~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg 233 (435)
T 1p22_A 166 --------KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDR 233 (435)
T ss_dssp --------EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTS
T ss_pred --------EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCC
Confidence 2334568889999998 68899999999999999999999999999999999999997 46999999999
Q ss_pred eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeec
Q 010051 168 TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSE 247 (519)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~ 247 (519)
.|++||+........ ......+...|.+++| ++.++++++.+
T Consensus 234 ~i~vwd~~~~~~~~~----------------------------~~~~~~~~~~v~~~~~--~~~~l~s~~~d-------- 275 (435)
T 1p22_A 234 SIAVWDMASPTDITL----------------------------RRVLVGHRAAVNVVDF--DDKYIVSASGD-------- 275 (435)
T ss_dssp CEEEEECSSSSCCEE----------------------------EEEECCCSSCEEEEEE--ETTEEEEEETT--------
T ss_pred cEEEEeCCCCCCcee----------------------------eeEecCCCCcEEEEEe--CCCEEEEEeCC--------
Confidence 999999987642110 0112245677888888 78899998877
Q ss_pred ccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 248 SINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 248 ~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
+.+++||+... ..+..+.+|...|.++.|++ +++++++.||.|++||+.+++++..+.+
T Consensus 276 --g~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~------------------~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 334 (435)
T 1p22_A 276 --RTIKVWNTSTC-EFVRTLNGHKRGIACLQYRD------------------RLVVSGSSDNTIRLWDIECGACLRVLEG 334 (435)
T ss_dssp --SEEEEEETTTC-CEEEEEECCSSCEEEEEEET------------------TEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred --CeEEEEECCcC-cEEEEEcCCCCcEEEEEeCC------------------CEEEEEeCCCeEEEEECCCCCEEEEEeC
Confidence 69999999754 55667788999999999953 5689999999999999999999999998
Q ss_pred cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccc-------ceeeecCCcccccCCCCcccccCCccEEEeecCCc
Q 010051 328 LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELG-------IPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDK 400 (519)
Q Consensus 328 ~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~ 400 (519)
|...|++++| ++.+|++|+.||.|++||+..+... ....+.+| ...+.+++| ++.+|++++.|+
T Consensus 335 -h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~--~~~~l~s~s~Dg 405 (435)
T 1p22_A 335 -HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH----SGRVFRLQF--DEFQIVSSSHDD 405 (435)
T ss_dssp -CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC----SSCCCCEEE--CSSCEEECCSSS
T ss_pred -CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCC----CCCeEEEEe--CCCEEEEEeCCC
Confidence 9999999999 7889999999999999999765411 22233333 467888888 788899999888
Q ss_pred ee-eecCCCC
Q 010051 401 LV-TAETKEP 409 (519)
Q Consensus 401 ~i-~~~~~~~ 409 (519)
.+ +|+....
T Consensus 406 ~i~iwd~~~~ 415 (435)
T 1p22_A 406 TILIWDFLND 415 (435)
T ss_dssp EEEEEC----
T ss_pred EEEEEECCCC
Confidence 77 7765543
No 90
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-34 Score=270.33 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=198.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--ceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCc
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKG--SVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKS 179 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 179 (519)
+...|++++|+|++++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.||.|++||+..++.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 6678999999999999999999999999999988 77788899999999999999999999999999999999987640
Q ss_pred cccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccC
Q 010051 180 KGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKD 259 (519)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~ 259 (519)
. ........+...|.+++|+|++++|++++.+ +.+++||+..
T Consensus 90 ~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~ 131 (377)
T 3dwl_C 90 W----------------------------KQTLVLLRLNRAATFVRWSPNEDKFAVGSGA----------RVISVCYFEQ 131 (377)
T ss_dssp C----------------------------CCEEECCCCSSCEEEEECCTTSSCCEEEESS----------SCEEECCC--
T ss_pred e----------------------------eeeeEecccCCceEEEEECCCCCEEEEEecC----------CeEEEEEECC
Confidence 0 0112223466789999999999999998877 6899999976
Q ss_pred CCc--ccccCCC-CCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCC------------------
Q 010051 260 LSR--PALQLPG-ASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTES------------------ 318 (519)
Q Consensus 260 ~~~--~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~------------------ 318 (519)
... ....+.. |...|.+++|+|++ +++++++.|+.|++||+..
T Consensus 132 ~~~~~~~~~~~~~h~~~v~~~~~~~~~----------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 195 (377)
T 3dwl_C 132 ENDWWVSKHLKRPLRSTILSLDWHPNN----------------VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPF 195 (377)
T ss_dssp ---CCCCEEECSSCCSCEEEEEECTTS----------------SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCE
T ss_pred cccceeeeEeecccCCCeEEEEEcCCC----------------CEEEEEeCCCEEEEEEEEecccCCCccccccccccch
Confidence 542 3455666 99999999999998 5688899999999999852
Q ss_pred CCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccc--eeeecCCcccccCCCCcccccCCccEEEee
Q 010051 319 VPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGI--PISLSGNKVSKDENKSPLVTKSEDMIIEAS 396 (519)
Q Consensus 319 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 396 (519)
++++..+ . |...|++++|+|++++|++++.||.|++||+.+++... ...+.+| ...+.+++|+|++.+|+++
T Consensus 196 ~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 196 NTVCAEY-P-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS----QLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp EEEEECC-C-CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS----SSCEEEEEEEETTEEEEEE
T ss_pred hhhhhcc-c-CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC----CCceEEEEEcCCCCEEEEE
Confidence 3455555 5 99999999999999999999999999999999876411 2223333 3578999999999999999
Q ss_pred cCCceeeecCCCCC
Q 010051 397 TNDKLVTAETKEPD 410 (519)
Q Consensus 397 ~~d~~i~~~~~~~~ 410 (519)
++++.++|......
T Consensus 270 ~~~~~~~~~~~~~~ 283 (377)
T 3dwl_C 270 YNYSPILLQGNESG 283 (377)
T ss_dssp SSSSEEEECCCC--
T ss_pred cCCcEEEEEeCCCc
Confidence 99999988876433
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.5e-33 Score=261.11 Aligned_cols=249 Identities=20% Similarity=0.235 Sum_probs=199.9
Q ss_pred cCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCC
Q 010051 10 WHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTET 89 (519)
Q Consensus 10 ~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~ 89 (519)
.+|...|++++|+|++++|++|+.||.|+|||+.+++.
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~------------------------------------------ 168 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK------------------------------------------ 168 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------------------------------------------
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE------------------------------------------
Confidence 34899999999999999999999999999999876642
Q ss_pred cccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCceEEEecccccCeEEEEEcCCCCeEEEeeCCCe
Q 010051 90 GQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVN-KGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRT 168 (519)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~ 168 (519)
+..+.+|...|.+++|+ +.+|++|+.||.|++||++ .+..+..+.+|...|.+++|+|++++|++++.||.
T Consensus 169 ------~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 169 ------LRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp ------EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ------EEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 22334588899999994 6799999999999999998 46677888999999999999999999999999999
Q ss_pred EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecc
Q 010051 169 CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSES 248 (519)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~ 248 (519)
|++||++..+. +.....+...|.+++|+|++..++++++. ..
T Consensus 241 v~iwd~~~~~~-------------------------------~~~~~~~~~~v~~~~~~p~~~~ll~~~~g-------s~ 282 (401)
T 4aez_A 241 VQIWDARSSIP-------------------------------KFTKTNHNAAVKAVAWCPWQSNLLATGGG-------TM 282 (401)
T ss_dssp EEEEETTCSSE-------------------------------EEEECCCSSCCCEEEECTTSTTEEEEECC-------TT
T ss_pred EEEccCCCCCc-------------------------------cEEecCCcceEEEEEECCCCCCEEEEecC-------CC
Confidence 99999987542 11222456778999999988766664420 01
Q ss_pred cceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEE--EecCCeEEEEeCCCCCceEE--
Q 010051 249 INSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFA--IATLNSLYIYDTESVPPIAI-- 324 (519)
Q Consensus 249 ~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~--~~~d~~i~vwd~~~~~~~~~-- 324 (519)
++.+++||+.... ....+ .+...+.+++|+|++. ++++ |+.||.|++||+.++.....
T Consensus 283 d~~i~i~d~~~~~-~~~~~-~~~~~v~~~~~s~~~~----------------~l~~~~g~~dg~i~v~~~~~~~~~~~~~ 344 (401)
T 4aez_A 283 DKQIHFWNAATGA-RVNTV-DAGSQVTSLIWSPHSK----------------EIMSTHGFPDNNLSIWSYSSSGLTKQVD 344 (401)
T ss_dssp TCEEEEEETTTCC-EEEEE-ECSSCEEEEEECSSSS----------------EEEEEECTTTCEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCCC-EEEEE-eCCCcEEEEEECCCCC----------------eEEEEeecCCCcEEEEecCCccceeEEE
Confidence 2799999997543 33333 3567899999999984 4555 44789999999998665544
Q ss_pred EeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccc
Q 010051 325 LAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELG 365 (519)
Q Consensus 325 ~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~ 365 (519)
+.+ |...|++++|+|+|++|++++.||.|++|++.+++..
T Consensus 345 ~~~-h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 345 IPA-HDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEC-CSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred ecC-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 556 9999999999999999999999999999999887543
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.9e-33 Score=262.62 Aligned_cols=288 Identities=14% Similarity=0.176 Sum_probs=223.9
Q ss_pred CEEEEEEecCCCEE-EEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEcc-C---------CCeEEEEE
Q 010051 15 PVLTLDFHPISGLL-ATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSP-C---------GGELIIWK 83 (519)
Q Consensus 15 ~V~~~~~sp~~~~l-a~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~---------~~~i~vw~ 83 (519)
....++++|+...+ ++++.||.|+||++....... .....+.+|...|.+++|+| + |+.|+||+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~-----~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~ 110 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD-----KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWE 110 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC-----TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC-----CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEE
Confidence 44568899887644 457889999999986543221 12334678999999999999 4 58999999
Q ss_pred cccCCCcccc-eeeeccccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceEEEe--cccccCeEEEEEcCCCCe
Q 010051 84 LHTTETGQAW-KVLKNLSFHRKDVLDLQWSTDG-AFLLSGSVDNSCIIWDVNKGSVLQIL--DAHFHYVQGVAWDPLSKY 159 (519)
Q Consensus 84 ~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~ 159 (519)
+..+...... ..+..+.+|...|++++|+|++ .+|++++.|+.|++||+.+++.+..+ ..|...|.+++|+|++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence 9876322111 3456677899999999999998 69999999999999999999999999 889999999999999999
Q ss_pred EEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcc-eeeEEEEccCCCeEEEe--
Q 010051 160 VASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPS-FFRRLAWSPDGSFLLVP-- 236 (519)
Q Consensus 160 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~sp~g~~l~~~-- 236 (519)
|++++.||.|++||+++++... .+ . ..+.. .+.++.|+|++.+++++
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~----------~~-------------------~-~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVA----------EK-------------------D-RPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEE----------EE-------------------E-CSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred EEEEecCCcEEEEeCCCCceee----------ee-------------------c-cCCCCCcceEEEEcCCCcEEEEecc
Confidence 9999999999999998764211 00 0 12222 37789999999999987
Q ss_pred -cCCcceeeeecccceEEEEeccCCCccccc-CCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEE
Q 010051 237 -AGSYKISSMSESINSAYIFSRKDLSRPALQ-LPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIY 314 (519)
Q Consensus 237 -~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vw 314 (519)
+.+ +.+++||+.....+... ...+...+.++.|+|++..+ +++++.|+.|++|
T Consensus 241 ~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l---------------~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 241 RMSE----------RQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIV---------------YLCGKGDSSIRYF 295 (402)
T ss_dssp TTCC----------EEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEE---------------EEEETTCSCEEEE
T ss_pred CCCC----------ceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEE---------------EEEEcCCCeEEEE
Confidence 444 69999999876553333 23577889999999998432 3455578999999
Q ss_pred eCCCCCc-eEEEec-cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 315 DTESVPP-IAILAG-LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 315 d~~~~~~-~~~~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
|+.+++. +..+.. .|...|++++|+|++.++++ .++.+++|++.++..
T Consensus 296 d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 296 EITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred EecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 9999885 555544 14589999999999998875 567999999998653
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.3e-33 Score=263.73 Aligned_cols=261 Identities=15% Similarity=0.193 Sum_probs=209.8
Q ss_pred eeEEecCCCCCEEEEEEecC----C---CEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCC
Q 010051 5 TLQINWHDTKPVLTLDFHPI----S---GLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGG 77 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~sp~----~---~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 77 (519)
.+..+.+|...|++++|+|+ + ++|++++.||.|+|||+.+++....
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~--------------------------- 106 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK--------------------------- 106 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC---------------------------
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc---------------------------
Confidence 46667799999999999999 9 9999999999999999987653110
Q ss_pred eEEEEEcccCCCcccceeeeccccC-----CCCeEEEEEc----CCCCE-EEEEeCCCeEEEEEcCC------CceEE--
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFH-----RKDVLDLQWS----TDGAF-LLSGSVDNSCIIWDVNK------GSVLQ-- 139 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~dg~i~vwd~~~------~~~~~-- 139 (519)
.....+..| ...|.+++|+ |++++ |++++.||.|++||+.+ ++.+.
T Consensus 107 ----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 170 (397)
T 1sq9_A 107 ----------------VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS 170 (397)
T ss_dssp ----------------EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred ----------------ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeecc
Confidence 112233345 5889999999 99999 99999999999999998 66655
Q ss_pred ---Ee-------cccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccc
Q 010051 140 ---IL-------DAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKN 209 (519)
Q Consensus 140 ---~~-------~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (519)
.+ ..|...|.+++|+|++ +|++++.||.|++||++..+.. ..+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~----------~~~~~-------------- 225 (397)
T 1sq9_A 171 PTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL----------YNFES-------------- 225 (397)
T ss_dssp CEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE----------EEEEC--------------
T ss_pred CcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCcee----------EEEec--------------
Confidence 66 4488899999999999 9999999999999999875321 11100
Q ss_pred eeeecCCC---cceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCC-------------CCCC
Q 010051 210 HLFHDETL---PSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPG-------------ASKP 273 (519)
Q Consensus 210 ~~~~~~~~---~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-------------~~~~ 273 (519)
...+ ...|.+++|+|++++|++++.+. ..+.|++||+... ..+..+.. |...
T Consensus 226 ----~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-------~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 226 ----QHSMINNSNSIRSVKFSPQGSLLAIAHDSN-------SFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp ----CC---CCCCCEEEEEECSSTTEEEEEEEET-------TEEEEEEEETTTC-CEEEEECBC--------CCBSBSSC
T ss_pred ----cccccccCCccceEEECCCCCEEEEEecCC-------CCceEEEEECCCC-cccceeccCcccccccccccccCCc
Confidence 0114 57789999999999999876541 0148999999754 44556666 8999
Q ss_pred eEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEe------ccc---------------ccc
Q 010051 274 VVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILA------GLH---------------YAA 332 (519)
Q Consensus 274 v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~------~~~---------------~~~ 332 (519)
|.+++|+|++ +++++++.|+.|++||+.+++.+..+. . | ...
T Consensus 294 v~~~~~~~~~----------------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 294 VMSLSFNDSG----------------ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE-IEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp EEEEEECSSS----------------SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS-SGGGCCCBCTTSCBCSSCC
T ss_pred EEEEEECCCC----------------CEEEEEeCCCeEEEEEcCCCceeEEEecccCccc-chhhhhccccccccccCCc
Confidence 9999999988 668888999999999999999999998 7 7 899
Q ss_pred EEEEEEcCCC----------CEEEEEeCCCcEEEEEecCC
Q 010051 333 ITDIAWSNNA----------RYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 333 i~~~~~s~~g----------~~l~~~~~dg~i~vwd~~~~ 362 (519)
|++++|+|+| ++|++++.||.|++|++.++
T Consensus 357 v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 357 VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999999998 79999999999999999875
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3e-33 Score=266.07 Aligned_cols=264 Identities=19% Similarity=0.325 Sum_probs=213.0
Q ss_pred EEecCCCCCEEEEEEecC-CCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 7 QINWHDTKPVLTLDFHPI-SGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~-~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
....+|.+.|++++|+|+ +.+||+++.+|.|+||++........ +
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----------------------~----------- 167 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-----------------------P----------- 167 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----------------------T-----------
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-----------------------c-----------
Confidence 455789999999999997 67999999999999999975421100 0
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCce-------EEEecccccCeEEEEEcC-C
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGA-FLLSGSVDNSCIIWDVNKGSV-------LQILDAHFHYVQGVAWDP-L 156 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~-------~~~~~~h~~~v~~~~~~~-~ 156 (519)
.........+.+|...|++++|+|++. +|++|+.||.|++||+.++.. ...+..|...|.+++|+| +
T Consensus 168 ----~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 243 (430)
T 2xyi_A 168 ----SGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH 243 (430)
T ss_dssp ----TCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC
T ss_pred ----cccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC
Confidence 000134555667999999999999988 999999999999999987422 456778999999999999 6
Q ss_pred CCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe-EEE
Q 010051 157 SKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF-LLV 235 (519)
Q Consensus 157 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~-l~~ 235 (519)
+.+|++++.||.|++||++...... .+.....+...|++++|+|++.+ +++
T Consensus 244 ~~~l~s~~~dg~i~i~d~~~~~~~~----------------------------~~~~~~~~~~~v~~i~~~p~~~~~l~t 295 (430)
T 2xyi_A 244 ESLFGSVADDQKLMIWDTRNNNTSK----------------------------PSHTVDAHTAEVNCLSFNPYSEFILAT 295 (430)
T ss_dssp TTEEEEEETTSEEEEEETTCSCSSS----------------------------CSEEEECCSSCEEEEEECSSCTTEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCCCc----------------------------ceeEeecCCCCeEEEEeCCCCCCEEEE
Confidence 7889999999999999998753110 01111245677999999999985 666
Q ss_pred ecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEe
Q 010051 236 PAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYD 315 (519)
Q Consensus 236 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd 315 (519)
++.+ +.|++||++....++..+..|...|.+++|+|++.. ++++++.|+.|++||
T Consensus 296 g~~d----------g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~---------------~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 296 GSAD----------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET---------------ILASSGTDRRLHVWD 350 (430)
T ss_dssp EETT----------SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTT---------------EEEEEETTSCCEEEE
T ss_pred EeCC----------CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCC---------------EEEEEeCCCcEEEEe
Confidence 6665 799999998877778888889999999999999843 478888999999999
Q ss_pred CCC--------------CCceEEEeccccccEEEEEEcCCCC-EEEEEeCCCcEEEEEecCC
Q 010051 316 TES--------------VPPIAILAGLHYAAITDIAWSNNAR-YLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 316 ~~~--------------~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~ 362 (519)
+.. ...+..+.+ |...|++++|+|+++ +|++++.||.|+||++...
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCccccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 986 255566666 899999999999999 8999999999999999754
No 95
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.4e-33 Score=280.83 Aligned_cols=282 Identities=17% Similarity=0.175 Sum_probs=225.9
Q ss_pred eeeeccccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC-----ceEEEecccccCeEEEEEcCCCCeEEEeeCCC
Q 010051 94 KVLKNLSFHRKDVLDLQWSTDG-AFLLSGSVDNSCIIWDVNKG-----SVLQILDAHFHYVQGVAWDPLSKYVASLSSDR 167 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg 167 (519)
.....+.+|...|++++|+|++ .+|++|+.|++|++||+.+. .....+.+|...|.+++|+|++++|++++.||
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 3445678899999999999865 78999999999999999763 34567899999999999999999999999999
Q ss_pred eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeec
Q 010051 168 TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSE 247 (519)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~ 247 (519)
.|++||+.++... .....|...|.+++|+|++++|++++.+
T Consensus 453 ~v~vwd~~~~~~~-------------------------------~~~~~h~~~v~~~~~s~~~~~l~s~s~D-------- 493 (694)
T 3dm0_A 453 ELRLWDLAAGVST-------------------------------RRFVGHTKDVLSVAFSLDNRQIVSASRD-------- 493 (694)
T ss_dssp EEEEEETTTTEEE-------------------------------EEEECCSSCEEEEEECTTSSCEEEEETT--------
T ss_pred cEEEEECCCCcce-------------------------------eEEeCCCCCEEEEEEeCCCCEEEEEeCC--------
Confidence 9999999876421 1122466789999999999999998887
Q ss_pred ccceEEEEeccCCCcc--cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEE
Q 010051 248 SINSAYIFSRKDLSRP--ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAIL 325 (519)
Q Consensus 248 ~~~~i~i~~~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 325 (519)
+.|++||....... .....+|...|.+++|+|++.. ..+++++.|+.|++||+.+++....+
T Consensus 494 --~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--------------~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 494 --RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ--------------PTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp --SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS--------------CEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred --CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc--------------ceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 69999997543211 1223578889999999998632 46899999999999999999999999
Q ss_pred eccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeec
Q 010051 326 AGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAE 405 (519)
Q Consensus 326 ~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~ 405 (519)
.+ |...|++++|+|+|++|++++.||.|++||+.+++....+ . ....+.+++|+|++.+|++++++++.+|+
T Consensus 558 ~~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~--~-----~~~~v~~~~~sp~~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 558 AG-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL--E-----ANSVIHALCFSPNRYWLCAATEHGIKIWD 629 (694)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC--B-----CSSCEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred cC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe--c-----CCCcEEEEEEcCCCcEEEEEcCCCEEEEE
Confidence 98 9999999999999999999999999999999887533222 1 13468899999999999999998888998
Q ss_pred CCCCCcccc-----------------------------ccccCCCceEEeccccceeeeecc
Q 010051 406 TKEPDKRKT-----------------------------EAETKDDETAINGSIAAESRLIEP 438 (519)
Q Consensus 406 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 438 (519)
......... ..-.++...+++++.++.+++|+.
T Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp TTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 765432110 112345566777777777777754
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=249.78 Aligned_cols=274 Identities=12% Similarity=0.088 Sum_probs=223.1
Q ss_pred ccccccccCcceeEEEEccC---------CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCe
Q 010051 56 YQNSLSYHGSAINILRFSPC---------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNS 126 (519)
Q Consensus 56 ~~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 126 (519)
....+.+|...|.+++| ++ ++.|++||+.+. .....+..|...|.+++|+|++++|++++.||.
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ------WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS------EEEEEEEECSSCEEEEEEETTTTEEEEEETTSC
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC------EEEEEeecCCccEEEEEECCCCCEEEEecCCCe
Confidence 34457789999999999 55 589999999776 567777789999999999999999999999999
Q ss_pred EEEEEcCCC---ceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccC
Q 010051 127 CIIWDVNKG---SVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDD 203 (519)
Q Consensus 127 i~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (519)
|++|++... +.+..+..|...|.++.| ++++|++++.||.|++||. .+ .
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~--~~----------~-------------- 134 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE--GS----------L-------------- 134 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET--TE----------E--------------
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC--Cc----------E--------------
Confidence 999998764 556778899999999999 5789999999999999992 11 0
Q ss_pred CccccceeeecCCCcceeeEEEEcc-CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCC-CCCCeEEEEEcC
Q 010051 204 SKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPG-ASKPVVAVRFCP 281 (519)
Q Consensus 204 ~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-~~~~v~~~~~sp 281 (519)
......+...+.++.|+| ++.++++++.+ +.+++||.. .....+.. |...+.+++|+|
T Consensus 135 -------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~ 194 (313)
T 3odt_A 135 -------VYNLQAHNASVWDAKVVSFSENKFLTASAD----------KTIKLWQND---KVIKTFSGIHNDVVRHLAVVD 194 (313)
T ss_dssp -------EEEEECCSSCEEEEEEEETTTTEEEEEETT----------SCEEEEETT---EEEEEECSSCSSCEEEEEEEE
T ss_pred -------EEecccCCCceeEEEEccCCCCEEEEEECC----------CCEEEEecC---ceEEEEeccCcccEEEEEEcC
Confidence 111224567788999998 89999998877 689999943 34444555 889999999999
Q ss_pred CcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 282 LAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 282 ~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
++ . +++++.|+.|++||+.+++.+..+.. |...|++++|+|++ .|++++.||.|++||+.+
T Consensus 195 ~~----------------~-~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 195 DG----------------H-FISCSNDGLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp TT----------------E-EEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred CC----------------e-EEEccCCCeEEEEECCchhhhhhhhc-CCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 87 4 78889999999999999999999998 99999999999999 688999999999999998
Q ss_pred CcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeecCCCC
Q 010051 362 DELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETKEP 409 (519)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~~~ 409 (519)
++....+. .+ ...+.+++|+|++.+++++.++.+.+|+....
T Consensus 256 ~~~~~~~~--~~----~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 256 GSLKQVIT--LP----AISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp CCEEEEEE--CS----SSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred CceeEEEe--cc----CceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 86544333 22 35789999999999666555555558876554
No 97
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.2e-32 Score=258.39 Aligned_cols=255 Identities=20% Similarity=0.272 Sum_probs=204.2
Q ss_pred CeeEEe--cCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEE
Q 010051 4 GTLQIN--WHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELII 81 (519)
Q Consensus 4 ~~~~~~--~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~v 81 (519)
...+++ .+|...|++|+|+|+|++||+|+.||.|+|||+.+++.
T Consensus 136 ~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~---------------------------------- 181 (420)
T 4gga_A 136 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR---------------------------------- 181 (420)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----------------------------------
T ss_pred CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE----------------------------------
Confidence 344443 36788999999999999999999999999999987653
Q ss_pred EEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceEEEecccccCeEEEEEcCCCCeE
Q 010051 82 WKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKG-SVLQILDAHFHYVQGVAWDPLSKYV 160 (519)
Q Consensus 82 w~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l 160 (519)
+..+.+|...+.+++++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+|+++++
T Consensus 182 --------------~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l 245 (420)
T 4gga_A 182 --------------LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL 245 (420)
T ss_dssp --------------EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred --------------EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCee
Confidence 33345588888888875 679999999999999998864 4567789999999999999999999
Q ss_pred EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEE-ecCC
Q 010051 161 ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLV-PAGS 239 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~-~~~~ 239 (519)
++++.|+.+++|+...++.... .+.....+...|.+++|+|++..+++ +++.
T Consensus 246 ~s~~~D~~v~i~~~~~~~~~~~---------------------------~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGEGGWV---------------------------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp EEEETTSCEEEEESSCCSSCSC---------------------------CSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred eeeeccccceEEeeccccccce---------------------------eeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 9999999999999987653211 11222355678999999997765543 3321
Q ss_pred cceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE--ecCCeEEEEeCC
Q 010051 240 YKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI--ATLNSLYIYDTE 317 (519)
Q Consensus 240 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~--~~d~~i~vwd~~ 317 (519)
.++.|++||+.+.. ....+. +...+.++.|+|++.. ++++ ..|+.|+|||+.
T Consensus 299 --------~D~~I~iwd~~t~~-~~~~~~-~~~~v~~~~~~~~~~~----------------lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 299 --------SDRHIRIWNVCSGA-CLSAVD-AHSQVCSILWSPHYKE----------------LISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp --------TTCEEEEEETTTTE-EEEEEE-CSSCEEEEEEETTTTE----------------EEEEECTTTCCEEEEETT
T ss_pred --------CCCEEEEEeCCccc-cceeec-cccceeeeeecCCCCe----------------EEEEEecCCCEEEEEECC
Confidence 23789999997643 333333 3467899999998844 4443 368999999999
Q ss_pred CCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 318 SVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
+++++..+.+ |...|++++|+|+|++|++|+.|++|+|||+...
T Consensus 353 ~~~~v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 353 TMAKVAELKG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TCCEEEEECC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999 9999999999999999999999999999999764
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-33 Score=258.99 Aligned_cols=266 Identities=19% Similarity=0.220 Sum_probs=208.3
Q ss_pred eeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCceEEEecccccCeEEEEEcCC--CCeEEEeeCCCeEE
Q 010051 95 VLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVN--KGSVLQILDAHFHYVQGVAWDPL--SKYVASLSSDRTCR 170 (519)
Q Consensus 95 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~ 170 (519)
.+..+.+|...|++++|+|++++|++|+.||.|++||+. +++.+..+.+|...|++++|+++ +++|++++.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 456778899999999999999999999999999999998 55677888999999999999987 89999999999999
Q ss_pred EEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC--CCeEEEecCCcceeeeecc
Q 010051 171 IYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD--GSFLLVPAGSYKISSMSES 248 (519)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~~~~~~~~~~~ 248 (519)
+||+..++.. .+.....+...|.+++|+|+ +.++++++.+
T Consensus 83 iwd~~~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------- 124 (379)
T 3jrp_A 83 IWKEENGRWS-----------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--------- 124 (379)
T ss_dssp EEEEETTEEE-----------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETT---------
T ss_pred EEEcCCCcee-----------------------------EeeeecCCCcceEEEEeCCCCCCCEEEEecCC---------
Confidence 9999875310 11222345678999999999 9999998877
Q ss_pred cceEEEEeccCCC-cccccCCCCCCCeEEEEEcCCccccccc---CCCCcccccceEEEEEecCCeEEEEeCCCCC----
Q 010051 249 INSAYIFSRKDLS-RPALQLPGASKPVVAVRFCPLAFNLRES---NSAGFFKLPYRLIFAIATLNSLYIYDTESVP---- 320 (519)
Q Consensus 249 ~~~i~i~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~---~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~---- 320 (519)
+.+++||+.... .....+..|...|.+++|+|........ ..++ .++++++.|+.|++||+.++.
T Consensus 125 -~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~~dg~i~i~d~~~~~~~~~ 197 (379)
T 3jrp_A 125 -GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES------RKFVTGGADNLVKIWKYNSDAQTYV 197 (379)
T ss_dssp -SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTT------CEEEEEETTSCEEEEEEETTTTEEE
T ss_pred -CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCC------CEEEEEeCCCeEEEEEecCCCccee
Confidence 699999997653 2344566889999999999942111000 0011 678999999999999998765
Q ss_pred ceEEEeccccccEEEEEEcCC---CCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeec
Q 010051 321 PIAILAGLHYAAITDIAWSNN---ARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 321 ~~~~~~~~~~~~i~~~~~s~~---g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
....+.+ |...|++++|+|+ +++|++++.||.|++||+..+........... ..+...+.+++|+|++.+|++++
T Consensus 198 ~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 198 LESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE-EKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEEEECC-CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS-SCCSSCEEEEEECSSSCCEEEEE
T ss_pred eEEEEec-ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecc-ccCCCcEEEEEEcCCCCEEEEec
Confidence 3356666 9999999999999 89999999999999999988643222222111 12346789999999999999988
Q ss_pred CCcee-eecCC
Q 010051 398 NDKLV-TAETK 407 (519)
Q Consensus 398 ~d~~i-~~~~~ 407 (519)
.|+.+ +|+..
T Consensus 276 ~dg~i~iw~~~ 286 (379)
T 3jrp_A 276 GDNKVTLWKEN 286 (379)
T ss_dssp SSSSEEEEEEE
T ss_pred CCCcEEEEeCC
Confidence 88766 66644
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.1e-32 Score=249.40 Aligned_cols=280 Identities=14% Similarity=0.167 Sum_probs=203.9
Q ss_pred eEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 6 LQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
+....+|...|++++|+|||++||+|+.++ ++||++.+++....
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~----------------------------------- 55 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS----------------------------------- 55 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE-----------------------------------
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee-----------------------------------
Confidence 334577999999999999999999998776 78999875542110
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEee
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFL-LSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLS 164 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 164 (519)
. +...+..+++.++++.+ ++++.|++|++||+.+++.+..+. |...|.++.|+++. ++++
T Consensus 56 -----------~----~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~- 116 (355)
T 3vu4_A 56 -----------Q----EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS- 116 (355)
T ss_dssp -----------E----ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-
T ss_pred -----------e----ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-
Confidence 0 11136677888888877 567778999999999999988887 56789999998753 4443
Q ss_pred CCCeEEEEecCCC-CccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEe--cCCcc
Q 010051 165 SDRTCRIYANRPT-KSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVP--AGSYK 241 (519)
Q Consensus 165 ~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~--~~~~~ 241 (519)
.|+.|++||+.+. +...... .....+++++ .+++++ ..+
T Consensus 117 ~~~~i~i~d~~~~~~~~~~~~----------------------------------~~~~~~~~s~--~~la~~sg~~~-- 158 (355)
T 3vu4_A 117 YGDVISVFKFGNPWKRITDDI----------------------------------RFGGVCEFSN--GLLVYSNEFNL-- 158 (355)
T ss_dssp ETTEEEEEESSTTCCBSSCCE----------------------------------EEEEEEEEET--TEEEEEESSCT--
T ss_pred EcCEEEEEECCCCceeeEEec----------------------------------cCCceEEEEc--cEEEEeCCCcC--
Confidence 4889999999876 3211110 0122456666 666664 333
Q ss_pred eeeeecccceEEEEeccCCC--------------cc-cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe
Q 010051 242 ISSMSESINSAYIFSRKDLS--------------RP-ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA 306 (519)
Q Consensus 242 ~~~~~~~~~~i~i~~~~~~~--------------~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~ 306 (519)
+.|++||+.... .+ ...+.+|...|++++|+|+| +++++++
T Consensus 159 --------g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g----------------~~l~s~s 214 (355)
T 3vu4_A 159 --------GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS----------------DMVATCS 214 (355)
T ss_dssp --------TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS----------------SEEEEEE
T ss_pred --------cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC----------------CEEEEEe
Confidence 789999997643 12 56788999999999999998 6688999
Q ss_pred cCCe-EEEEeCCCCCceEEEe-ccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCC-----------
Q 010051 307 TLNS-LYIYDTESVPPIAILA-GLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGN----------- 373 (519)
Q Consensus 307 ~d~~-i~vwd~~~~~~~~~~~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~----------- 373 (519)
.|++ |++||+.+++++..+. +.|...|++++|+|+|++|++++.|++|++||+..........+...
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWS 294 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSC
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccc
Confidence 9998 9999999999999998 33899999999999999999999999999999987643322222110
Q ss_pred ------cccccCCCCcccccCCccEEEeecCCcee
Q 010051 374 ------KVSKDENKSPLVTKSEDMIIEASTNDKLV 402 (519)
Q Consensus 374 ------~~~~~~~~~~~~~s~~~~~l~~~~~d~~i 402 (519)
..........++|++|+.+|++++.|+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~ 329 (355)
T 3vu4_A 295 LCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMI 329 (355)
T ss_dssp SEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEE
T ss_pred eeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeE
Confidence 00011223668899999999999888766
No 100
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.9e-32 Score=254.05 Aligned_cols=246 Identities=15% Similarity=0.150 Sum_probs=206.7
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCC
Q 010051 101 FHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS--VLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTK 178 (519)
Q Consensus 101 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 178 (519)
.|...|++++|+|++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+..++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 488999999999999999999999999999999987 888899999999999999999999999999999999997653
Q ss_pred ccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEecc
Q 010051 179 SKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRK 258 (519)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~ 258 (519)
.. .......+...|.+++|+|+++++++++.+ +.+++|++.
T Consensus 86 ~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~v~i~d~~ 126 (372)
T 1k8k_C 86 WK-----------------------------PTLVILRINRAARCVRWAPNEKKFAVGSGS----------RVISICYFE 126 (372)
T ss_dssp EE-----------------------------EEEECCCCSSCEEEEEECTTSSEEEEEETT----------SSEEEEEEE
T ss_pred ee-----------------------------eeEEeecCCCceeEEEECCCCCEEEEEeCC----------CEEEEEEec
Confidence 11 112223456779999999999999998877 689999997
Q ss_pred CCCc---ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeC------------------C
Q 010051 259 DLSR---PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDT------------------E 317 (519)
Q Consensus 259 ~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~------------------~ 317 (519)
.... .......|...|.+++|+|++ +++++++.|+.|++||+ .
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (372)
T 1k8k_C 127 QENDWWVCKHIKKPIRSTVLSLDWHPNS----------------VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 190 (372)
T ss_dssp TTTTEEEEEEECTTCCSCEEEEEECTTS----------------SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCC
T ss_pred CCCcceeeeeeecccCCCeeEEEEcCCC----------------CEEEEEcCCCCEEEEEcccccccccccccccccccc
Confidence 6542 233446788999999999988 56888889999999995 4
Q ss_pred CCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeec
Q 010051 318 SVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 318 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
.++.+..+.. |...|++++|+|++++|++++.||.|++||+.+++....+ ..+ ...+.+++|+|++.+|+++.
T Consensus 191 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~----~~~v~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 191 FGELMFESSS-SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL--ASE----TLPLLAVTFITESSLVAAGH 263 (372)
T ss_dssp TTCEEEECCC-CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE--ECS----SCCEEEEEEEETTEEEEEET
T ss_pred hhhheEecCC-CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE--ccC----CCCeEEEEEecCCCEEEEEe
Confidence 6778888887 9999999999999999999999999999999887544333 233 35789999999999999997
Q ss_pred CCceeeecCCC
Q 010051 398 NDKLVTAETKE 408 (519)
Q Consensus 398 ~d~~i~~~~~~ 408 (519)
++...+|+...
T Consensus 264 d~~i~i~~~~~ 274 (372)
T 1k8k_C 264 DCFPVLFTYDS 274 (372)
T ss_dssp TSSCEEEEEET
T ss_pred CCeEEEEEccC
Confidence 76666887655
No 101
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-31 Score=257.68 Aligned_cols=299 Identities=16% Similarity=0.197 Sum_probs=232.1
Q ss_pred cccccCcce-eEEEEcc-------CCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 010051 59 SLSYHGSAI-NILRFSP-------CGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIW 130 (519)
Q Consensus 59 ~~~~~~~~v-~~~~~~~-------~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 130 (519)
.+.+|...+ .++.+.+ .|+.|++||+.++ +.+..+.+|...|++++|++++ +|++|+.||+|++|
T Consensus 116 ~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~------~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINK------KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred EEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCC------cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 466677664 5666654 3799999999887 6788888999999999999988 99999999999999
Q ss_pred EcCCCceEEEecccccCeEEEEEc--CCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCcccc
Q 010051 131 DVNKGSVLQILDAHFHYVQGVAWD--PLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAK 208 (519)
Q Consensus 131 d~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (519)
|+.+++.+..+.+|...|.+++|+ +++++|++++.||.|++||+..................... .....
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 260 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT--------PEENP 260 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESC--------GGGCT
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeec--------cCCCe
Confidence 999999999999999999999998 57789999999999999999886543221111110000000 00011
Q ss_pred ceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccc
Q 010051 209 NHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRE 288 (519)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 288 (519)
..+.....+...+.++ ++++.++++++.+ +.+++||+.. ...+..+.+|...|.+++|+|++
T Consensus 261 ~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d----------~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~----- 322 (464)
T 3v7d_B 261 YFVGVLRGHMASVRTV--SGHGNIVVSGSYD----------NTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHER----- 322 (464)
T ss_dssp TEEEEECCCSSCEEEE--EEETTEEEEEETT----------SCEEEEETTT-TEEEEEECCCSSCEEEEEEETTT-----
T ss_pred EEEEEccCccceEEEE--cCCCCEEEEEeCC----------CeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCC-----
Confidence 1122233445555554 6889999998877 6999999975 45567788899999999999988
Q ss_pred cCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccccee
Q 010051 289 SNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPI 368 (519)
Q Consensus 289 ~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~ 368 (519)
+++++++.|+.|++||+.+++++..+.+ |...|++++|+ +.+|++++.||.|++||+.+.......
T Consensus 323 -----------~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 323 -----------KRCISASMDTTIRIWDLENGELMYTLQG-HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp -----------TEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred -----------CEEEEEeCCCcEEEEECCCCcEEEEEeC-CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 5688899999999999999999999998 99999999997 579999999999999999876432222
Q ss_pred eecCCcccccCCCCcccccCCccEEEeecCCceeeecCCCCCc
Q 010051 369 SLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETKEPDK 411 (519)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~~~~~ 411 (519)
. ....+..++|++++.++++++++...+|+......
T Consensus 389 ~-------~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 389 H-------HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKL 424 (464)
T ss_dssp E-------CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCE
T ss_pred c-------CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcE
Confidence 1 23466778999999999999966666888766543
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-31 Score=255.58 Aligned_cols=316 Identities=12% Similarity=0.039 Sum_probs=220.2
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCc---cccccccccccccccccCcceeEEEEc-------------cCCC
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGE---KQKKIPTASYQNSLSYHGSAINILRFS-------------PCGG 77 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~-------------~~~~ 77 (519)
.++.+++|+|+|++|+++ .++.|++||+.+++ .+..+.. +........+. ++..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSD---------DFDKIQESRNTTAKEQQGQSSENENENK 74 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEEC---------CC--------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCC---------ccccccccccccchhhcccccccccccc
Confidence 578999999999977766 47889999999998 4433221 11101111110 0000
Q ss_pred eEEEEEcccC--CCcccceeeeccccCCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEcC--CCceEEEec--ccccCeEE
Q 010051 78 ELIIWKLHTT--ETGQAWKVLKNLSFHRKDVLDLQWSTDGAFL-LSGSVDNSCIIWDVN--KGSVLQILD--AHFHYVQG 150 (519)
Q Consensus 78 ~i~vw~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~--~~~~~~~~~--~h~~~v~~ 150 (519)
....-.-... .............+|...|++++|+|++++| ++++.||.|++||+. +++.+..+. .|...|.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~ 154 (450)
T 2vdu_B 75 KLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNA 154 (450)
T ss_dssp -------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEE
T ss_pred ccccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceE
Confidence 0000000000 0000001122334678899999999999996 889999999999999 888888776 56688999
Q ss_pred EEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC-
Q 010051 151 VAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD- 229 (519)
Q Consensus 151 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~- 229 (519)
++|+|++++|++++.+|.|++|++........ .......+...|.+++|+|+
T Consensus 155 ~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~---------------------------~~~~~~~h~~~v~~~~~sp~~ 207 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKFGDVYSIDINSIPEEKF---------------------------TQEPILGHVSMLTDVHLIKDS 207 (450)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTSCCCSSC---------------------------CCCCSEECSSCEEEEEEEECT
T ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCcccccc---------------------------cceeeecccCceEEEEEcCCC
Confidence 99999999999999999999999987653210 00011134577999999999
Q ss_pred --CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec
Q 010051 230 --GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT 307 (519)
Q Consensus 230 --g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~ 307 (519)
+++|++++.+ +.|++||+.........+.+|...|.+++|+ ++ +++++++.
T Consensus 208 ~~~~~l~s~~~d----------~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~----------------~~l~s~~~ 260 (450)
T 2vdu_B 208 DGHQFIITSDRD----------EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD----------------YLLLSAGG 260 (450)
T ss_dssp TSCEEEEEEETT----------SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST----------------TEEEEEES
T ss_pred CCCcEEEEEcCC----------CcEEEEECCCCceeeeeecCCCCceEEEEEC-CC----------------CEEEEEeC
Confidence 9999998877 6999999976544333467899999999999 87 66888899
Q ss_pred CCeEEEEeCCCCCceEEEecc------------------------ccccEEEEEEcCCCCEEEEEe-CCCcEEEEEe--c
Q 010051 308 LNSLYIYDTESVPPIAILAGL------------------------HYAAITDIAWSNNARYLALSS-QDGYCTLVEF--E 360 (519)
Q Consensus 308 d~~i~vwd~~~~~~~~~~~~~------------------------~~~~i~~~~~s~~g~~l~~~~-~dg~i~vwd~--~ 360 (519)
|+.|++||+.+++++..+... +...|.+++|+|++++|++++ .|+.|++|++ .
T Consensus 261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~ 340 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340 (450)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC
Confidence 999999999999988888631 235689999999999999998 8999999999 4
Q ss_pred CC-cccceeeecCCcccccCCCCcccccCCccEEEeecC
Q 010051 361 ND-ELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTN 398 (519)
Q Consensus 361 ~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 398 (519)
.+ .+.....+..+ ..+.+++|+|++.+++.++.
T Consensus 341 ~~~~l~~~~~~~~~-----~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 341 QKGDLALKQIITFP-----YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp STTCEEEEEEEECS-----SCEEEEEEETTEEEEEECCT
T ss_pred CCCceeeccEeccC-----CceEEEEecCCcEEEEEecc
Confidence 33 12222223222 56889999997655555554
No 103
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1e-32 Score=255.81 Aligned_cols=277 Identities=13% Similarity=0.066 Sum_probs=203.6
Q ss_pred CcceeEEEEccCC----------------CeEEEEEcccCCCcccc--e--eeeccccCCCCeEEEEEcCCCCEEEEE--
Q 010051 64 GSAINILRFSPCG----------------GELIIWKLHTTETGQAW--K--VLKNLSFHRKDVLDLQWSTDGAFLLSG-- 121 (519)
Q Consensus 64 ~~~v~~~~~~~~~----------------~~i~vw~~~~~~~~~~~--~--~~~~~~~~~~~v~~~~~s~~~~~l~~~-- 121 (519)
..+|++++|+|++ +.|++|++......... . ....+.+|...|.+++++ ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 4579999999984 14899999765432211 1 123466788889888775 5566665
Q ss_pred ---------eCCCeEEEEEcCCCceEE----Ee-----cccccCeEEEEEcCCCCeEEEe--eCCCeEEEEecCCCCccc
Q 010051 122 ---------SVDNSCIIWDVNKGSVLQ----IL-----DAHFHYVQGVAWDPLSKYVASL--SSDRTCRIYANRPTKSKG 181 (519)
Q Consensus 122 ---------~~dg~i~vwd~~~~~~~~----~~-----~~h~~~v~~~~~~~~~~~l~~~--~~dg~i~iwd~~~~~~~~ 181 (519)
+.|+.+++|++.+..... .. ..+...+.+++|+|||++++++ +.|++|++||+.+.+...
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 357789999987653221 11 2234568999999999998654 478999999998764210
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
...+...|.+++|+|+|+++++++.+ .+.+|+.....
T Consensus 172 --------------------------------~~~~~~~V~~v~fspdg~~l~s~s~~-----------~~~~~~~~~~~ 208 (365)
T 4h5i_A 172 --------------------------------EIETRGEVKDLHFSTDGKVVAYITGS-----------SLEVISTVTGS 208 (365)
T ss_dssp --------------------------------EEECSSCCCEEEECTTSSEEEEECSS-----------CEEEEETTTCC
T ss_pred --------------------------------EeCCCCceEEEEEccCCceEEeccce-----------eEEEEEeccCc
Confidence 01234668999999999999998754 56667665544
Q ss_pred cc-cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC----eEEEEeCCCCCc----eEEEecccccc
Q 010051 262 RP-ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN----SLYIYDTESVPP----IAILAGLHYAA 332 (519)
Q Consensus 262 ~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~----~i~vwd~~~~~~----~~~~~~~~~~~ 332 (519)
.. ......|...|.+++|+|++ .++++++.++ .+++|++..... ...+.+ |...
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg----------------~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 271 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADD----------------TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKG 271 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETT----------------EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSC
T ss_pred ceeeeecCCCCCCEEEEEEcCCC----------------CEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCC
Confidence 33 23456788899999999998 5566666665 688899876643 345566 8899
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCC
Q 010051 333 ITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETK 407 (519)
Q Consensus 333 i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~ 407 (519)
|++++|||+|++||+|+.|++|+|||+.+++.... .+.+|. ..|++++|||||.+|++++.|++| +|+..
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~-~~~gH~----~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI-FKQAHS----FAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE-ETTSSS----SCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE-ecCccc----CCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 99999999999999999999999999988753221 134444 689999999999999999999998 77653
No 104
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7e-32 Score=253.13 Aligned_cols=271 Identities=13% Similarity=0.058 Sum_probs=181.9
Q ss_pred EEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC--------CCCEEEEEeCCCeEEEEEcCCCceEEEe
Q 010051 70 LRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST--------DGAFLLSGSVDNSCIIWDVNKGSVLQIL 141 (519)
Q Consensus 70 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 141 (519)
++....|++|+|||+..+... ....+..+.+|...|++++|+| |+++||+|+.|++|+|||+.++..+..+
T Consensus 104 las~~~d~~v~lw~~~~~~~~-~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETII-TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEE-EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccc-eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 444556899999999876321 1234567889999999999998 8899999999999999999999888888
Q ss_pred cccccCeEEEEEcCCCC-eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcce
Q 010051 142 DAHFHYVQGVAWDPLSK-YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSF 220 (519)
Q Consensus 142 ~~h~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (519)
..|...|.+++|+|++. +|++++.||+|++||+++++........... .....................+...
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~------~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV------KNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C------SCCCSEEEESGGGC------CCSSS
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc------ccceEEecccccceeeeeccccccc
Confidence 88999999999999874 7999999999999999887643221110000 0000000000111111223345677
Q ss_pred eeEEEEc-cCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcc----
Q 010051 221 FRRLAWS-PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFF---- 295 (519)
Q Consensus 221 i~~~~~s-p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~---- 295 (519)
+.++.|+ |+|+.+++++.+ +.+++||+... .....+..|...+..+.+.|+++.+.........
T Consensus 257 v~~v~~~~~dg~~l~s~s~d----------~~i~vwd~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKS----------GAWLRWNLFAN-NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp CSEEEEETTTTCEEEEECTT----------SEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred ceeeeeecCCCCEEEEEeCC----------CCEEEEECccC-CCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 8889987 799999998877 69999998654 3445566777888888888887655433221111
Q ss_pred cccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEec
Q 010051 296 KLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 296 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~ 360 (519)
.....++++|+.||.|++||+.+++....+.. |..+|++++|+|||++||+++.+| +.+|.+.
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~-~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEEE-CSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEecC-CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 11225677788899999999999999888888 889999999999999999998665 6666654
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-31 Score=253.46 Aligned_cols=270 Identities=14% Similarity=0.213 Sum_probs=209.3
Q ss_pred ccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC-------ceEEEeccc
Q 010051 73 SPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST-DGAFLLSGSVDNSCIIWDVNKG-------SVLQILDAH 144 (519)
Q Consensus 73 ~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~h 144 (519)
...+|.|+||++..... ....+..+.+|...|++++|+| ++++|++|+.||.|++||+.++ +.+..+.+|
T Consensus 53 ~~~~g~i~v~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGR--VDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp CSSSCCEEEEETTCCEE--CCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred EcCCCEEEEEECccCCC--CCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 45589999999965421 1124456778999999999999 9999999999999999999987 567888999
Q ss_pred ccCeEEEEEcCCC-CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeE
Q 010051 145 FHYVQGVAWDPLS-KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRR 223 (519)
Q Consensus 145 ~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 223 (519)
...|.+++|+|++ ++|++++.||.|++||+.+++.. .. +....+...|.+
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----------~~-------------------~~~~~~~~~v~~ 181 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV----------LT-------------------LGPDVHPDTIYS 181 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE----------EE-------------------ECTTTCCSCEEE
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc----------EE-------------------EecCCCCCceEE
Confidence 9999999999998 69999999999999999876421 00 111346678999
Q ss_pred EEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccC-CCCCCC-eEEEEEcCCcccccccCCCCcccccceE
Q 010051 224 LAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQL-PGASKP-VVAVRFCPLAFNLRESNSAGFFKLPYRL 301 (519)
Q Consensus 224 ~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~-~~~~~~-v~~~~~sp~~~~l~~~~~~g~~~~~~~~ 301 (519)
++|+|++.+|++++.+ +.+++||++... ....+ ..|... +..+.|+|++ .+
T Consensus 182 ~~~~~~~~~l~~~~~d----------~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------------~~ 234 (402)
T 2aq5_A 182 VDWSRDGALICTSCRD----------KRVRVIEPRKGT-VVAEKDRPHEGTRPVHAVFVSEG----------------KI 234 (402)
T ss_dssp EEECTTSSCEEEEETT----------SEEEEEETTTTE-EEEEEECSSCSSSCCEEEECSTT----------------EE
T ss_pred EEECCCCCEEEEEecC----------CcEEEEeCCCCc-eeeeeccCCCCCcceEEEEcCCC----------------cE
Confidence 9999999999998877 699999997643 44444 667665 8999999988 55
Q ss_pred EEEE---ecCCeEEEEeCCCCCc-eEEEeccccccEEEEEEcCCCCEEEE-EeCCCcEEEEEecCCcc-cceeeecCCcc
Q 010051 302 IFAI---ATLNSLYIYDTESVPP-IAILAGLHYAAITDIAWSNNARYLAL-SSQDGYCTLVEFENDEL-GIPISLSGNKV 375 (519)
Q Consensus 302 ~~~~---~~d~~i~vwd~~~~~~-~~~~~~~~~~~i~~~~~s~~g~~l~~-~~~dg~i~vwd~~~~~~-~~~~~~~~~~~ 375 (519)
++++ +.|+.|++||+.++.. +......|...+.+++|+|++++|++ ++.||.|++|++.+++. ...+ ..+.
T Consensus 235 l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l--~~~~- 311 (402)
T 2aq5_A 235 LTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYL--SMFS- 311 (402)
T ss_dssp EEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEE--EEEC-
T ss_pred EEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEee--cccc-
Confidence 6777 6789999999998765 44443237788999999999999975 55799999999998752 2222 2222
Q ss_pred cccCCCCcccccCCccEEEeecCCceeeec
Q 010051 376 SKDENKSPLVTKSEDMIIEASTNDKLVTAE 405 (519)
Q Consensus 376 ~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~ 405 (519)
+...+.+++|+|++.+++++.. ...+|.
T Consensus 312 -~~~~v~~~~~sp~~~~~~s~~~-~~~~~~ 339 (402)
T 2aq5_A 312 -SKESQRGMGYMPKRGLEVNKCE-IARFYK 339 (402)
T ss_dssp -CSSCCSEEEECCGGGSCGGGTE-EEEEEE
T ss_pred -cCCcccceEEecccccceecce-eEEEEE
Confidence 3468999999999998876433 333444
No 106
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-30 Score=237.73 Aligned_cols=271 Identities=16% Similarity=0.260 Sum_probs=217.7
Q ss_pred eEEEEccC-------CCeEEEEEcccCCCcccceeee--ccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceE
Q 010051 68 NILRFSPC-------GGELIIWKLHTTETGQAWKVLK--NLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVL 138 (519)
Q Consensus 68 ~~~~~~~~-------~~~i~vw~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 138 (519)
++|+||++ |++|+|||+.++ +.+. .+.+|...|++++|+|++++|++|+.||+|++||+++++.+
T Consensus 29 ~~l~WS~~~~lAvg~D~tV~iWd~~tg------~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 29 NLVDWSSGNVLAVALDNSVYLWSASSG------DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTTC------CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEECCCCEEEEEeCCEEEEEECCCC------CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 45566554 689999999887 3444 34568889999999999999999999999999999999999
Q ss_pred EEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCc
Q 010051 139 QILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLP 218 (519)
Q Consensus 139 ~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (519)
..+.+|...+.++.+ ++..+++++.++.+++|+....... +.....+.
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~ 150 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHH------------------------------VATLSGHS 150 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE------------------------------EEEEECCS
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCcee------------------------------EEEEcCcc
Confidence 999999988877665 4679999999999999998765321 11222456
Q ss_pred ceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc---ccccCCCCCCCeEEEEEcCCcccccccCCCCcc
Q 010051 219 SFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR---PALQLPGASKPVVAVRFCPLAFNLRESNSAGFF 295 (519)
Q Consensus 219 ~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~ 295 (519)
..+..+.++++++++++++.+ +.+++||+..... .......+...|..+.++|++..+
T Consensus 151 ~~~~~~~~~~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------- 211 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHLASGGND----------NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV--------- 211 (318)
T ss_dssp SCEEEEEECTTSSEEEEEETT----------SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE---------
T ss_pred CceEEEEEcCCCCEEEEEecC----------cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE---------
Confidence 778899999999999998877 6999999976542 234456778899999999987554
Q ss_pred cccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEe--CCCcEEEEEecCCcccceeeecCC
Q 010051 296 KLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSS--QDGYCTLVEFENDELGIPISLSGN 373 (519)
Q Consensus 296 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~ 373 (519)
-.+++++.++.|++||........... +...+..+.|+|++..+++++ .|+.|++||+.+++.. ..+.+|
T Consensus 212 ----~~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~--~~l~gH 283 (318)
T 4ggc_A 212 ----LATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV--AELKGH 283 (318)
T ss_dssp ----EEEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE--EEECCC
T ss_pred ----EEEEecCCCCEEEEEeccccccccccc--ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE--EEEcCC
Confidence 234566778999999999887766655 577899999999999888765 7899999999887543 344555
Q ss_pred cccccCCCCcccccCCccEEEeecCCcee-eecCC
Q 010051 374 KVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETK 407 (519)
Q Consensus 374 ~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~ 407 (519)
. ..|.+++|+|||.+|++++.|+.| +|+..
T Consensus 284 ~----~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 284 T----SRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp S----SCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred C----CCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 4 689999999999999999999988 77654
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-31 Score=254.69 Aligned_cols=257 Identities=15% Similarity=0.206 Sum_probs=204.9
Q ss_pred ccccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCC----------CceEEEecccccCeEEEEEcCCCC-eEEEeeC
Q 010051 98 NLSFHRKDVLDLQWSTD-GAFLLSGSVDNSCIIWDVNK----------GSVLQILDAHFHYVQGVAWDPLSK-YVASLSS 165 (519)
Q Consensus 98 ~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~ 165 (519)
....|...|++++|+|+ +.+|++++.||.|++||+.+ ...+..+.+|...|.+++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34458999999999997 67999999999999999987 567788899999999999999988 9999999
Q ss_pred CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEecCCcceee
Q 010051 166 DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISS 244 (519)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~ 244 (519)
||.|++|++.......... ........+...|.+++|+| ++..+++++.+
T Consensus 203 dg~i~vwd~~~~~~~~~~~------------------------~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d----- 253 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVI------------------------DAKNIFTGHTAVVEDVAWHLLHESLFGSVADD----- 253 (430)
T ss_dssp TSCEEEEETTSCCBGGGEE------------------------ECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----
T ss_pred CCeEEEEeCCCCCCCCcee------------------------ccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----
Confidence 9999999998743211000 00112234667899999999 66777777666
Q ss_pred eecccceEEEEeccCCC--cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCC-CCc
Q 010051 245 MSESINSAYIFSRKDLS--RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTES-VPP 321 (519)
Q Consensus 245 ~~~~~~~i~i~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~-~~~ 321 (519)
+.|++||++... .+...+..|...|++++|+|++.. ++++++.||.|++||+++ ..+
T Consensus 254 -----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~---------------~l~tg~~dg~v~vwd~~~~~~~ 313 (430)
T 2xyi_A 254 -----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF---------------ILATGSADKTVALWDLRNLKLK 313 (430)
T ss_dssp -----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTT---------------EEEEEETTSEEEEEETTCTTSC
T ss_pred -----CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCC---------------EEEEEeCCCeEEEEeCCCCCCC
Confidence 699999998653 455666789999999999998743 478889999999999998 567
Q ss_pred eEEEeccccccEEEEEEcCCCC-EEEEEeCCCcEEEEEecCCcc------------cceeeecCCcccccCCCCcccccC
Q 010051 322 IAILAGLHYAAITDIAWSNNAR-YLALSSQDGYCTLVEFENDEL------------GIPISLSGNKVSKDENKSPLVTKS 388 (519)
Q Consensus 322 ~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~s~ 388 (519)
+..+.. |...|++++|+|+++ +|++++.||.|+|||+..... .......+| ...+..++|+|
T Consensus 314 ~~~~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~p 388 (430)
T 2xyi_A 314 LHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH----TAKISDFSWNP 388 (430)
T ss_dssp SEEEEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCC----SSCEEEEEECS
T ss_pred eEEeec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCC----CCCceEEEECC
Confidence 888888 999999999999995 699999999999999987321 112222232 35789999999
Q ss_pred Ccc-EEEeecCCcee-eecCCC
Q 010051 389 EDM-IIEASTNDKLV-TAETKE 408 (519)
Q Consensus 389 ~~~-~l~~~~~d~~i-~~~~~~ 408 (519)
++. +|++++.|+.+ +|....
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCEEEEEECCCCEEEeEccc
Confidence 998 88888888876 666544
No 108
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.2e-31 Score=243.58 Aligned_cols=262 Identities=15% Similarity=0.201 Sum_probs=204.7
Q ss_pred eccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----ceEEEecccccCeEEEEEcC--CCCeEEEeeCCCeEE
Q 010051 97 KNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKG----SVLQILDAHFHYVQGVAWDP--LSKYVASLSSDRTCR 170 (519)
Q Consensus 97 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~i~ 170 (519)
..+.+|...|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 345689999999999999999999999999999999876 46677789999999999999 699999999999999
Q ss_pred EEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC--CCeEEEecCCcceeeeecc
Q 010051 171 IYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD--GSFLLVPAGSYKISSMSES 248 (519)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~~~~~~~~~~~ 248 (519)
+||+..+........ ...+.....+...|.+++|+|+ +.++++++.+
T Consensus 85 vwd~~~~~~~~~~~~----------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------- 133 (351)
T 3f3f_A 85 LWEEDPDQEECSGRR----------------------WNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--------- 133 (351)
T ss_dssp EEEECTTSCTTSSCS----------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---------
T ss_pred EEecCCCcccccccC----------------------cceeeeecccCCceeEEEEcCCCCCcEEEEecCC---------
Confidence 999987653211000 0112223356788999999999 9999998877
Q ss_pred cceEEEEeccCCCcccc------------cCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeC
Q 010051 249 INSAYIFSRKDLSRPAL------------QLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDT 316 (519)
Q Consensus 249 ~~~i~i~~~~~~~~~~~------------~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~ 316 (519)
+.+++||+........ ....|...+.++.|+|+... + .++++++.++.+.+|+.
T Consensus 134 -g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~------~~l~~~~~~~~~~~~~~ 199 (351)
T 3f3f_A 134 -GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFS-------P------EKLAVSALEQAIIYQRG 199 (351)
T ss_dssp -CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSS-------C------CEEEEEETTEEEEEEEC
T ss_pred -CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCC-------C------cEEEEecCCCcEEEEcc
Confidence 6999999876542211 11267789999999997210 1 67888999999988888
Q ss_pred CCCCc--eEEEeccccccEEEEEEcCCC----CEEEEEeCCCcEEEEEecCCccc-------------------------
Q 010051 317 ESVPP--IAILAGLHYAAITDIAWSNNA----RYLALSSQDGYCTLVEFENDELG------------------------- 365 (519)
Q Consensus 317 ~~~~~--~~~~~~~~~~~i~~~~~s~~g----~~l~~~~~dg~i~vwd~~~~~~~------------------------- 365 (519)
..+.. +..+.+ |...|++++|+|++ ++|++++.||.|++||+..+...
T Consensus 200 ~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (351)
T 3f3f_A 200 KDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQG 278 (351)
T ss_dssp TTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------
T ss_pred CCCceeeeeecCC-CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccc
Confidence 87765 566667 99999999999998 89999999999999999875211
Q ss_pred -------------------ceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCC
Q 010051 366 -------------------IPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 366 -------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~ 408 (519)
....+.+ +...+.+++|+|++.+|++++.|+.+ +|+...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 279 RSDSNTEEKAELQSNLQVELLSEHDD----HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ------------CCSEEEEEEEEECT----TSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred ccccccceeeeecccccccEEEEEec----ccccEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 1111222 34689999999999999999988876 676543
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-31 Score=269.27 Aligned_cols=264 Identities=19% Similarity=0.218 Sum_probs=206.3
Q ss_pred eccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCceEEEecccccCeEEEEEcCC--CCeEEEeeCCCeEEEE
Q 010051 97 KNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVN--KGSVLQILDAHFHYVQGVAWDPL--SKYVASLSSDRTCRIY 172 (519)
Q Consensus 97 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~iw 172 (519)
..+.+|.+.|++++|+|++++|++|+.||.|++||+. ++..+..+.+|.+.|++++|+|+ +++|++++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4567899999999999999999999999999999998 45677888999999999999988 9999999999999999
Q ss_pred ecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC--CCeEEEecCCcceeeeecccc
Q 010051 173 ANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD--GSFLLVPAGSYKISSMSESIN 250 (519)
Q Consensus 173 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~--g~~l~~~~~~~~~~~~~~~~~ 250 (519)
|+.+++.. .+.....+...|.+++|+|+ +..+++++.+ +
T Consensus 83 d~~~~~~~-----------------------------~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d----------g 123 (753)
T 3jro_A 83 KEENGRWS-----------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSD----------G 123 (753)
T ss_dssp EEETTEEE-----------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETT----------S
T ss_pred ECCCCccc-----------------------------ccccccCCCCCeEEEEECCCCCCCEEEEEeCC----------C
Confidence 98875310 11222346678999999999 9999998887 6
Q ss_pred eEEEEeccCCC-cccccCCCCCCCeEEEEEcCCcccc---cccCCCCcccccceEEEEEecCCeEEEEeCCCC----Cce
Q 010051 251 SAYIFSRKDLS-RPALQLPGASKPVVAVRFCPLAFNL---RESNSAGFFKLPYRLIFAIATLNSLYIYDTESV----PPI 322 (519)
Q Consensus 251 ~i~i~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l---~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~----~~~ 322 (519)
.|++||+.... .....+.+|...|.++.|+|..... .....++ .++++++.||.|++||+.++ ...
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~------~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES------RKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGG------CCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCC------CEEEEEECCCeEEEEeccCCcccceee
Confidence 99999997653 3344567889999999999952100 0000112 67899999999999999877 445
Q ss_pred EEEeccccccEEEEEEcCC---CCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCC
Q 010051 323 AILAGLHYAAITDIAWSNN---ARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTND 399 (519)
Q Consensus 323 ~~~~~~~~~~i~~~~~s~~---g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d 399 (519)
..+.+ |...|++++|+|+ +++|++++.||.|++||+..+.......... ...+...+.+++|+|+|.+|++++.|
T Consensus 198 ~~~~~-h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~-~~~~~~~v~~l~~spdg~~l~s~s~D 275 (753)
T 3jro_A 198 STLEG-HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGD 275 (753)
T ss_dssp EEECC-CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSS-SSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred eeecC-CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEec-cCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 56677 9999999999999 8999999999999999998864322111111 11235689999999999999999988
Q ss_pred cee-eecCC
Q 010051 400 KLV-TAETK 407 (519)
Q Consensus 400 ~~i-~~~~~ 407 (519)
+.+ +|+..
T Consensus 276 g~I~vwd~~ 284 (753)
T 3jro_A 276 NKVTLWKEN 284 (753)
T ss_dssp SCEECCBCC
T ss_pred CEEEEEecC
Confidence 877 77655
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.4e-31 Score=249.57 Aligned_cols=303 Identities=14% Similarity=0.172 Sum_probs=227.6
Q ss_pred CCcEEEEEecCCccccccccccccccccccCcceeEEEEcc-C---------CCeEEEEEcccCCCcccceeee------
Q 010051 34 DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSP-C---------GGELIIWKLHTTETGQAWKVLK------ 97 (519)
Q Consensus 34 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~---------~~~i~vw~~~~~~~~~~~~~~~------ 97 (519)
++.++||++..++... .+.+|...|++++|+| + ++.|++|++.+...........
T Consensus 22 ~~~~~v~~~~~~~~~~---------~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 92 (408)
T 4a11_B 22 ESTRRVLGLELNKDRD---------VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGR 92 (408)
T ss_dssp HHHHHHHTEEECTTEE---------ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECT
T ss_pred cCcceeeccccCccee---------eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccc
Confidence 4457777776665433 3566999999999999 6 5889999998774433222111
Q ss_pred -ccccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCC---CCeEEEeeCCCeEEEE
Q 010051 98 -NLSFHRKDVLDLQWST-DGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPL---SKYVASLSSDRTCRIY 172 (519)
Q Consensus 98 -~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~dg~i~iw 172 (519)
...+|...|.+++|+| ++.+|++++.||.|++||+.+++....+. +...+.++.|++. +.++++++.||.|++|
T Consensus 93 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (408)
T 4a11_B 93 DHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLC 171 (408)
T ss_dssp TCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEE
T ss_pred cccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEE
Confidence 1135999999999999 77899999999999999999998887776 6688999999984 4489999999999999
Q ss_pred ecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe-EEEecCCcceeeeecccce
Q 010051 173 ANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF-LLVPAGSYKISSMSESINS 251 (519)
Q Consensus 173 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~-l~~~~~~~~~~~~~~~~~~ 251 (519)
|+++++.. .....+...|.+++|+|++.+ +++++.+ +.
T Consensus 172 d~~~~~~~-------------------------------~~~~~~~~~v~~~~~~~~~~~ll~~~~~d----------g~ 210 (408)
T 4a11_B 172 DLKSGSCS-------------------------------HILQGHRQEILAVSWSPRYDYILATASAD----------SR 210 (408)
T ss_dssp ESSSSCCC-------------------------------EEECCCCSCEEEEEECSSCTTEEEEEETT----------SC
T ss_pred eCCCccee-------------------------------eeecCCCCcEEEEEECCCCCcEEEEEcCC----------Cc
Confidence 99876421 112245678999999999995 6676666 68
Q ss_pred EEEEeccCCCcccccC---------------CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeC
Q 010051 252 AYIFSRKDLSRPALQL---------------PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDT 316 (519)
Q Consensus 252 i~i~~~~~~~~~~~~~---------------~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~ 316 (519)
+++||++....+...+ ..|...|.+++|+|++ +++++++.|+.|++||+
T Consensus 211 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------~~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 211 VKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG----------------LHLLTVGTDNRMRLWNS 274 (408)
T ss_dssp EEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS----------------SEEEEEETTSCEEEEET
T ss_pred EEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC----------------CEEEEecCCCeEEEEEC
Confidence 9999997655433333 6788999999999998 66888899999999999
Q ss_pred CCCCceEEEecc----ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccE
Q 010051 317 ESVPPIAILAGL----HYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMI 392 (519)
Q Consensus 317 ~~~~~~~~~~~~----~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 392 (519)
.+++....+... ....+........+..+++++.|+.|++||+.+++... .+.+| ...+.+++|+|++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~--~~~~~----~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 275 SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT--MLKGH----YKTVDCCVFQSNFQE 348 (408)
T ss_dssp TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE--EECCC----SSCEEEEEEETTTTE
T ss_pred CCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee--eeccC----CCeEEEEEEcCCCCE
Confidence 988766544330 11222222333445667777889999999998875433 33344 368899999999999
Q ss_pred EEeecCCcee-eecCCCC
Q 010051 393 IEASTNDKLV-TAETKEP 409 (519)
Q Consensus 393 l~~~~~d~~i-~~~~~~~ 409 (519)
|++++.|+.+ +|+....
T Consensus 349 l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEEEETTSCEEEEEECC-
T ss_pred EEEECCCCeEEEEeCCCC
Confidence 9999988877 7776654
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=6.7e-30 Score=243.96 Aligned_cols=292 Identities=13% Similarity=0.075 Sum_probs=225.4
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CCeEEEE
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GGELIIW 82 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~i~vw 82 (519)
+...+.+++|+|++.++++++.++.|++||+.+++....+. ...+.+|...|.+++|+++ ++.|++|
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSP----PEKYKKKLGFVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECC----CHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecC----cccccccCCceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 34567799999987888888889999999999888665332 1134578889999999876 4899999
Q ss_pred EcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEE
Q 010051 83 KLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVA 161 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 161 (519)
|+.++ +....+..|...+.+++|+|+++++++++ .|+.|++||+.+++.+..+..+ ..+.+++|+|++++|+
T Consensus 197 d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 197 DLKTL------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELY 269 (433)
T ss_dssp ETTTC------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEE
T ss_pred ECCCc------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEE
Confidence 99876 56666777899999999999999886554 7999999999999988887765 4589999999999999
Q ss_pred Eee--------CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeE
Q 010051 162 SLS--------SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFL 233 (519)
Q Consensus 162 ~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l 233 (519)
+++ .||.|++||+.+++.... ..+...+..++|+|+++.+
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEKLIDT--------------------------------IGPPGNKRHIVSGNTENKI 317 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTEEEEE--------------------------------EEEEECEEEEEECSSTTEE
T ss_pred EEECCCCccccCCCeEEEEECCCCcEEee--------------------------------ccCCCCcceEEECCCCCEE
Confidence 888 488999999987642110 0122456789999999877
Q ss_pred EEe-cCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 234 LVP-AGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 234 ~~~-~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
+++ +.+ +.+++||+... .....+ .+...+.+++|+|++..++.+...... ....++++++.||.|+
T Consensus 318 ~~~~~~~----------~~v~v~d~~~~-~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~~~~~~~g~~dg~v~ 384 (433)
T 3bws_A 318 YVSDMCC----------SKIEVYDLKEK-KVQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNH-PTEGYLKKGLVLGKVY 384 (433)
T ss_dssp EEEETTT----------TEEEEEETTTT-EEEEEE-ECSSSEEEEEECTTSSEEEEEECCCCC-TTTCTTSCCSSCCEEE
T ss_pred EEEecCC----------CEEEEEECCCC-cEEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCc-cccccccccccceEEE
Confidence 665 444 68999999753 333333 356789999999999766554432110 0113455566688999
Q ss_pred EEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeC-CCcEEEEEecC
Q 010051 313 IYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQ-DGYCTLVEFEN 361 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-dg~i~vwd~~~ 361 (519)
+||+.+++.+..+.. ...+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 385 ~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 385 VIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 999999998888875 457999999999999998875 99999999863
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-30 Score=237.09 Aligned_cols=275 Identities=11% Similarity=0.051 Sum_probs=201.9
Q ss_pred EEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCC---cccceee
Q 010051 20 DFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTET---GQAWKVL 96 (519)
Q Consensus 20 ~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~---~~~~~~~ 96 (519)
.+.+++.+|++|+.||.|+|||+.+++.+..+. ......+..|+. +.....|+.|++|+...... ....+.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344678899999999999999999998776664 223344555555 55566789999997763210 0000222
Q ss_pred ecc-ccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCceEEEec-ccccCeEEEEEcCCCCeEEEeeCCCeEEEE
Q 010051 97 KNL-SFHRKDVLDLQWST--DGAFLLSGSVDNSCIIWDVNKGSVLQILD-AHFHYVQGVAWDPLSKYVASLSSDRTCRIY 172 (519)
Q Consensus 97 ~~~-~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~iw 172 (519)
..+ .+|...|.+++|+| ++++|++++.||.|++||+++++.+..+. .|...|.+++|+|++.+|++|+.||.|++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 222 25778999999999 99999999999999999999998876663 455689999999999999999999999999
Q ss_pred ecCCCCccccccccceeeEEEeccCcccccCCccccceeeecC-CCcceeeEEEEccCCCeEEEecCCcceeeeecccce
Q 010051 173 ANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDE-TLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINS 251 (519)
Q Consensus 173 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~ 251 (519)
|+++++... .... .|...|.+++|+|+|.+|++++. +.
T Consensus 198 d~~~~~~~~------------------------------~~~~~~h~~~v~~l~fs~~g~~l~s~~~-----------~~ 236 (343)
T 3lrv_A 198 NLSSPDQAS------------------------------SRFPVDEEAKIKEVKFADNGYWMVVECD-----------QT 236 (343)
T ss_dssp ESSCTTSCC------------------------------EECCCCTTSCEEEEEECTTSSEEEEEES-----------SB
T ss_pred ECCCCCCCc------------------------------cEEeccCCCCEEEEEEeCCCCEEEEEeC-----------Ce
Confidence 998875320 0111 25678999999999999999873 48
Q ss_pred EEEEeccCCCcccccCC---CCCCCeE--EEEEcCCcccccccCCCCcccccceEEEEEec-CCeEEEEeCCCCCceEEE
Q 010051 252 AYIFSRKDLSRPALQLP---GASKPVV--AVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT-LNSLYIYDTESVPPIAIL 325 (519)
Q Consensus 252 i~i~~~~~~~~~~~~~~---~~~~~v~--~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~-d~~i~vwd~~~~~~~~~~ 325 (519)
+++||++.... ...+. .|...+. +++|+|++ +++++++. ++.|++|++.........
T Consensus 237 v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g----------------~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 237 VVCFDLRKDVG-TLAYPTYTIPEFKTGTVTYDIDDSG----------------KNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp EEEEETTSSTT-CBSSCCCBC-----CCEEEEECTTS----------------SEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred EEEEEcCCCCc-ceeecccccccccccceEEEECCCC----------------CEEEEecCCCCcEEEEEEcccccceEe
Confidence 99999986543 22222 2333443 69999998 55777777 889999999766543332
Q ss_pred eccccccEEEEEEcC---CCCEEEEEeCCCcEEEEEecCC
Q 010051 326 AGLHYAAITDIAWSN---NARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 326 ~~~~~~~i~~~~~s~---~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
.++..++|++ +++.|++++.||.+.++-....
T Consensus 300 -----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 300 -----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp -----EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred -----cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 4678899999 8899999999999998865544
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=1.9e-30 Score=239.54 Aligned_cols=242 Identities=13% Similarity=0.095 Sum_probs=201.7
Q ss_pred eEEecCCCCCEEEEEEecCCC-EEEEEcCCCcEEEEEe-cCCccccccccccccccccccCcceeEEEEccCCCeEEEEE
Q 010051 6 LQINWHDTKPVLTLDFHPISG-LLATGGADYDIKIWLI-NSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWK 83 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~-~la~~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~ 83 (519)
+....+|...|++++|+|+++ +|++|+.||.|++||+ .+++.
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~------------------------------------ 92 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF------------------------------------ 92 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE------------------------------------
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce------------------------------------
Confidence 556678999999999999999 9999999999999998 66531
Q ss_pred cccCCCcccceeeecccc--CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC---------CceEEEecccccCeEEEE
Q 010051 84 LHTTETGQAWKVLKNLSF--HRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK---------GSVLQILDAHFHYVQGVA 152 (519)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~h~~~v~~~~ 152 (519)
..+.+ |...|.+++|+| +.+|++++.|+.|++||+.+ ++.+..+. |...|.+++
T Consensus 93 -------------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 93 -------------QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp -------------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred -------------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence 22234 888999999999 99999999999999999987 77666666 889999999
Q ss_pred EcCCCCeEEEeeCCCeEEEEecCC-CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CC
Q 010051 153 WDPLSKYVASLSSDRTCRIYANRP-TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DG 230 (519)
Q Consensus 153 ~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g 230 (519)
|+|++ |++++.|+.|++||++. ..... ......+...+.+++|+| ++
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~-----------------------------~~~~~~~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNG-----------------------------TIEESGLKYQIRDVALLPKEQ 206 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCC-----------------------------EEEECSCSSCEEEEEECSGGG
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccc-----------------------------eeeecCCCCceeEEEECCCCC
Confidence 99877 99999999999999987 43210 011123456788999999 99
Q ss_pred CeEEEecCCcceeeeecccceEEEEeccCC-----CcccccCCCCCC---------CeEEEEEcCCcccccccCCCCccc
Q 010051 231 SFLLVPAGSYKISSMSESINSAYIFSRKDL-----SRPALQLPGASK---------PVVAVRFCPLAFNLRESNSAGFFK 296 (519)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~-----~~~~~~~~~~~~---------~v~~~~~sp~~~~l~~~~~~g~~~ 296 (519)
+++++++.+ +.+++|++... ......+..|.. .|.+++|+|++
T Consensus 207 ~~l~~~~~d----------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~------------- 263 (342)
T 1yfq_A 207 EGYACSSID----------GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH------------- 263 (342)
T ss_dssp CEEEEEETT----------SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-------------
T ss_pred CEEEEEecC----------CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC-------------
Confidence 999998877 68999998765 355555666654 99999999988
Q ss_pred ccceEEEEEecCCeEEEEeCCCCCceEEEeccc-cccEEEEEEcCCCCEEEEEeCCCc-EEEEE
Q 010051 297 LPYRLIFAIATLNSLYIYDTESVPPIAILAGLH-YAAITDIAWSNNARYLALSSQDGY-CTLVE 358 (519)
Q Consensus 297 ~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~i~~~~~s~~g~~l~~~~~dg~-i~vwd 358 (519)
+++++++.||.|++||+.+++.+..+.+ | ...|++++ |++++|++++.||. .+.|.
T Consensus 264 ---~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 264 ---KFLYTAGSDGIISCWNLQTRKKIKNFAK-FNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp ---CCEEEEETTSCEEEEETTTTEEEEECCC-CSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred ---CEEEEecCCceEEEEcCccHhHhhhhhc-ccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 5678888899999999999999999988 7 99999999 99999999999998 44444
No 114
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=2.5e-30 Score=248.07 Aligned_cols=278 Identities=9% Similarity=0.121 Sum_probs=198.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-----------eEEEecccc------------cCeEEEEEcCCC-
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS-----------VLQILDAHF------------HYVQGVAWDPLS- 157 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~~~~- 157 (519)
+.+.|++++|+|+|++||+|+.||.|++||+.++. ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999998876 477888998 889999999998
Q ss_pred -CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEecc---Cccccc------CCccccceeeecCCCcceeeEEEEc
Q 010051 158 -KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKA---GQHSTD------DSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 158 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
.+|++++.|+.|++||+..................+... ...... ..............|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 789999999999999987643210000000000000000 000000 0000000011234677889999999
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCcccc-------cCCCCCCCeEEEEEcCCcccccccCCCCcccccce
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPAL-------QLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYR 300 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~-------~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~ 300 (519)
|++++|+++ .+ +.|++||+........ .+.+|...|.+++|+|++. .
T Consensus 187 ~~~~~l~s~-~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---------------~ 240 (447)
T 3dw8_B 187 SDYETYLSA-DD----------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSC---------------N 240 (447)
T ss_dssp TTSSEEEEE-CS----------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCT---------------T
T ss_pred CCCCEEEEe-CC----------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCC---------------c
Confidence 999999997 55 6999999974433333 3668899999999999862 3
Q ss_pred EEEEEecCCeEEEEeCCCCCc----eEEEeccccc------------cEEEEEEcCCCCEEEEEeCCCcEEEEEecC-Cc
Q 010051 301 LIFAIATLNSLYIYDTESVPP----IAILAGLHYA------------AITDIAWSNNARYLALSSQDGYCTLVEFEN-DE 363 (519)
Q Consensus 301 ~~~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~------------~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~-~~ 363 (519)
++++++.|+.|++||+++++. +..+.. |.. .|++++|+|+|++|++++. +.|++||+.. +.
T Consensus 241 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 241 TFVYSSSKGTIRLCDMRASALCDRHSKLFEE-PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp EEEEEETTSCEEEEETTTCSSSCTTCEEECC-C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS
T ss_pred EEEEEeCCCeEEEEECcCCccccceeeEecc-CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc
Confidence 478888899999999999887 678877 665 8999999999999999998 9999999986 54
Q ss_pred ccceeeecCCccccc-----------CCCCcccccCCccEEEeecCCcee-eecCCCC
Q 010051 364 LGIPISLSGNKVSKD-----------ENKSPLVTKSEDMIIEASTNDKLV-TAETKEP 409 (519)
Q Consensus 364 ~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~~ 409 (519)
....+. +|..... ..+..++|+|++.+|++++.|+.+ +|+....
T Consensus 319 ~~~~~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 319 PVETYQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CSCCEE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccceee--ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 433333 3321000 113458999999999999998888 7776554
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.9e-29 Score=238.65 Aligned_cols=324 Identities=11% Similarity=0.079 Sum_probs=228.5
Q ss_pred CCCCEEEEE---EecCCCEEEEEc--------------CCCcEEEEEec--CC--ccccccccccccccccccCcceeEE
Q 010051 12 DTKPVLTLD---FHPISGLLATGG--------------ADYDIKIWLIN--SG--EKQKKIPTASYQNSLSYHGSAINIL 70 (519)
Q Consensus 12 h~~~V~~~~---~sp~~~~la~~~--------------~dg~i~iwd~~--~~--~~~~~~~~~~~~~~~~~~~~~v~~~ 70 (519)
....+..++ |+|+++.+++.+ .++.+.||.+. ++ +....+.. ...+.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~ 128 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKT----------GFQPKSV 128 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEEC----------SSCBCCC
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcC----------CCCceEE
Confidence 455678888 888887665432 23323444443 23 22222221 1223345
Q ss_pred EEcc---------CCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEe
Q 010051 71 RFSP---------CGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQIL 141 (519)
Q Consensus 71 ~~~~---------~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 141 (519)
+|+| .++.|++||+.++.... ......+.+|...|.+++|++++.++++++.|+.|++||+.+++.+..+
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~ 207 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQTVR-LSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV 207 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCEEE-ECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeEee-ecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE
Confidence 5554 35789999998763210 0011145679999999999999999999999999999999999999999
Q ss_pred cccccCeEEEEEcCCCCeEEEe-eCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcce
Q 010051 142 DAHFHYVQGVAWDPLSKYVASL-SSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSF 220 (519)
Q Consensus 142 ~~h~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (519)
..|...+.+++|+|++++++++ +.|+.|++||+++++... .......
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~--------------------------------~~~~~~~ 255 (433)
T 3bws_A 208 DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR--------------------------------KTDKIGL 255 (433)
T ss_dssp ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE--------------------------------ECCCCSE
T ss_pred cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE--------------------------------EecCCCC
Confidence 8899999999999999988554 479999999998764211 1112345
Q ss_pred eeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccce
Q 010051 221 FRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYR 300 (519)
Q Consensus 221 i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~ 300 (519)
+.+++|+|+|+++++++...... ...++.|++||+.... ... ...+...+..++|+|++..
T Consensus 256 ~~~~~~~~~g~~l~~~~~~~~~~--~~~dg~i~~~d~~~~~-~~~-~~~~~~~~~~~~~~~~g~~--------------- 316 (433)
T 3bws_A 256 PRGLLLSKDGKELYIAQFSASNQ--ESGGGRLGIYSMDKEK-LID-TIGPPGNKRHIVSGNTENK--------------- 316 (433)
T ss_dssp EEEEEECTTSSEEEEEEEESCTT--CSCCEEEEEEETTTTE-EEE-EEEEEECEEEEEECSSTTE---------------
T ss_pred ceEEEEcCCCCEEEEEECCCCcc--ccCCCeEEEEECCCCc-EEe-eccCCCCcceEEECCCCCE---------------
Confidence 78999999999998876321000 0123689999987542 222 2245567889999999843
Q ss_pred EEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeC---------------CCcEEEEEecCCccc
Q 010051 301 LIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQ---------------DGYCTLVEFENDELG 365 (519)
Q Consensus 301 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~---------------dg~i~vwd~~~~~~~ 365 (519)
.+++++.++.|++||+.+++.+..+. +...+.+++|+|+|++|++++. ||.|++||+.+++..
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred EEEEecCCCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 35666788999999999998887775 5778999999999999988876 579999999887654
Q ss_pred ceeeecCCcccccCCCCcccccCCccEEEeec-CCcee-eecC
Q 010051 366 IPISLSGNKVSKDENKSPLVTKSEDMIIEAST-NDKLV-TAET 406 (519)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~d~~i-~~~~ 406 (519)
..+.. ...+..++|+|+|.+|++++ .++.+ +|+.
T Consensus 395 ~~~~~-------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 395 EFWEA-------GNQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp EEEEC-------SSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEecC-------CCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 43332 23578899999999988765 35555 6653
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1e-29 Score=222.92 Aligned_cols=275 Identities=12% Similarity=0.093 Sum_probs=175.4
Q ss_pred EEEEEEecCCC---EEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCccc
Q 010051 16 VLTLDFHPISG---LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQA 92 (519)
Q Consensus 16 V~~~~~sp~~~---~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~ 92 (519)
|.++-|-.-|- .+++++. ..|++|+..++..-. ...++.+|..+|..+++.|+-..+.---+-+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------ 108 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWE------KLYTWHFAEVPVLQIVPVPDVYNLVCVALGN------ 108 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEE------EEEEEECCSSCEEEECCCTTCCSCEEEEECS------
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccce------eeEEEeccCceeEEEEEcCcccceeeeeecc------
Confidence 55555544332 5667764 679999999882111 2334667777888888887643222111110
Q ss_pred ceeeeccccCCCCeEEEEEcCC----CCEEEEEe--------------------CCCeEEEEEc-CCCceEEEecccccC
Q 010051 93 WKVLKNLSFHRKDVLDLQWSTD----GAFLLSGS--------------------VDNSCIIWDV-NKGSVLQILDAHFHY 147 (519)
Q Consensus 93 ~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~--------------------~dg~i~vwd~-~~~~~~~~~~~h~~~ 147 (519)
-+...|+.++|+|| ++++++++ .|+.|++|++ .+|+.+..+.+|...
T Consensus 109 --------~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~ 180 (356)
T 2w18_A 109 --------LEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPE 180 (356)
T ss_dssp --------SSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCS
T ss_pred --------ccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCc
Confidence 02233444444444 33333322 4889999999 448888888889888
Q ss_pred eEEEEEcC---CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEE
Q 010051 148 VQGVAWDP---LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRL 224 (519)
Q Consensus 148 v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (519)
++.++|++ ++.+|++++.|++|+|||+.+++... .+... ..+...+.++
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~----------tL~g~------------------~~~v~~v~~v 232 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLK----------KMHID------------------DSYQASVCHK 232 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEE----------EEECC------------------C---CCCEEE
T ss_pred eeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEE----------EEcCC------------------CcceeeeEEE
Confidence 99999998 77899999999999999999886321 11100 0112356688
Q ss_pred EEccCCCeEEEecCCcce--eeeecccceEEEEeccCCCcccccC-----CCCCCCeEEEEEcCCcccccccCCCCcccc
Q 010051 225 AWSPDGSFLLVPAGSYKI--SSMSESINSAYIFSRKDLSRPALQL-----PGASKPVVAVRFCPLAFNLRESNSAGFFKL 297 (519)
Q Consensus 225 ~~sp~g~~l~~~~~~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~ 297 (519)
+|+|+|.++++++.+..+ ...+..+..+++||..+.. .+..+ .+|...+.+..++ +
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk-~l~v~~~~~p~Gh~~~~lsg~~s--g-------------- 295 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL-SVGVMLYCLPPGQAGRFLEGDVK--D-------------- 295 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTE-EEEEEEECCCTTCCCCEEEEEEE--T--------------
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE-EEEEEEeeccCCCcceeEccccC--C--------------
Confidence 999999998776543221 1224455799999986542 22111 2443333222222 1
Q ss_pred cceEEEEEecCCeEEEEeCCCCCceEEEeccccccE-EEEEEcCCCCEEEEEeCCCcEEEEEe
Q 010051 298 PYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAI-TDIAWSNNARYLALSSQDGYCTLVEF 359 (519)
Q Consensus 298 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i-~~~~~s~~g~~l~~~~~dg~i~vwd~ 359 (519)
.++++++.|++|+|||+.+++++.++.+ |...+ ..++|||||++|++|+.|++|+|||+
T Consensus 296 --~~lASgS~DgTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 296 --HCAAAILTSGTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --TEEEEEETTSCEEEEETTTCSEEEEECC-C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred --CEEEEEcCCCcEEEEECCCCcEEEEecC-CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4688899999999999999999999998 76654 46899999999999999999999996
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.1e-29 Score=242.12 Aligned_cols=243 Identities=21% Similarity=0.295 Sum_probs=197.8
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEE
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIW 82 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw 82 (519)
+..+..+.+|.+.|++++| ++++|++|+.||.|+|||+.+++.
T Consensus 163 ~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~----------------------------------- 205 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM----------------------------------- 205 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE-----------------------------------
T ss_pred CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE-----------------------------------
Confidence 4456677789999999999 688999999999999999987653
Q ss_pred EcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceE---EEecccccCeEEEEEcCCCCe
Q 010051 83 KLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVL---QILDAHFHYVQGVAWDPLSKY 159 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~ 159 (519)
+..+.+|...|.+++|+ +.+|++|+.||.|++||+.++... ..+.+|...|.++.| ++++
T Consensus 206 -------------~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~ 268 (435)
T 1p22_A 206 -------------LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKY 268 (435)
T ss_dssp -------------EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTE
T ss_pred -------------EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCE
Confidence 23334588889999997 459999999999999999987755 677889999999999 6889
Q ss_pred EEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCC
Q 010051 160 VASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGS 239 (519)
Q Consensus 160 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~ 239 (519)
|++++.||.|++||+++++.. .....+...|.++.| ++.++++++.+
T Consensus 269 l~s~~~dg~i~vwd~~~~~~~-------------------------------~~~~~~~~~v~~~~~--~~~~l~~g~~d 315 (435)
T 1p22_A 269 IVSASGDRTIKVWNTSTCEFV-------------------------------RTLNGHKRGIACLQY--RDRLVVSGSSD 315 (435)
T ss_dssp EEEEETTSEEEEEETTTCCEE-------------------------------EEEECCSSCEEEEEE--ETTEEEEEETT
T ss_pred EEEEeCCCeEEEEECCcCcEE-------------------------------EEEcCCCCcEEEEEe--CCCEEEEEeCC
Confidence 999999999999999876421 111234566778888 47888888777
Q ss_pred cceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCC
Q 010051 240 YKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV 319 (519)
Q Consensus 240 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~ 319 (519)
+.|++||+... ..+..+.+|...|.+++|. + .++++++.||.|++||+.++
T Consensus 316 ----------g~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~--~----------------~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 316 ----------NTIRLWDIECG-ACLRVLEGHEELVRCIRFD--N----------------KRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp ----------SCEEEEETTTC-CEEEEECCCSSCEEEEECC--S----------------SEEEEEETTSCEEEEEHHHH
T ss_pred ----------CeEEEEECCCC-CEEEEEeCCcCcEEEEEec--C----------------CEEEEEeCCCcEEEEECCCC
Confidence 69999999764 5667788899999999993 3 57899999999999999766
Q ss_pred C---------ceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 320 P---------PIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 320 ~---------~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
. ++..+.+ |...|++++| ++.+|++++.||.|++||+.+...
T Consensus 367 ~~~~~~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVE-HSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp TSTTSCTTTTEEEEECC-CSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred CCccccccchheeeccC-CCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 5 7788888 9999999999 788999999999999999987643
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.8e-28 Score=227.26 Aligned_cols=264 Identities=14% Similarity=0.130 Sum_probs=202.8
Q ss_pred CEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC----------CCeEEEEEcccCCCccccee
Q 010051 26 GLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC----------GGELIIWKLHTTETGQAWKV 95 (519)
Q Consensus 26 ~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~i~vw~~~~~~~~~~~~~ 95 (519)
.++++++.|+.|++||+.+++....+. .| ..+.+++|+|+ ++.|++||+.++ +.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~---------~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~------~~ 66 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIP---------VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN------NV 66 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE---------CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT------EE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEee---------cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCC------eE
Confidence 367889999999999999987665432 23 34778888887 478889999876 55
Q ss_pred eeccccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeE-EEeeCCCeEEEEe
Q 010051 96 LKNLSFHRKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYV-ASLSSDRTCRIYA 173 (519)
Q Consensus 96 ~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd 173 (519)
+..+..+. .+.+++|+|++++|+++ +.++.|++||+.+++.+..+..| ..+.+++|+|++++| ++++.++.|++||
T Consensus 67 ~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 67 IATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 56655444 89999999999988655 46799999999999988877765 578999999999977 6788899999999
Q ss_pred cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEe-cCCcceeeeecccceE
Q 010051 174 NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVP-AGSYKISSMSESINSA 252 (519)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~-~~~~~~~~~~~~~~~i 252 (519)
+.+++... .+ .....+..++|+|++++++++ ..+ +.+
T Consensus 145 ~~~~~~~~----------~~----------------------~~~~~~~~~~~~~dg~~l~~~~~~~----------~~v 182 (391)
T 1l0q_A 145 TVTKAVIN----------TV----------------------SVGRSPKGIAVTPDGTKVYVANFDS----------MSI 182 (391)
T ss_dssp TTTTEEEE----------EE----------------------ECCSSEEEEEECTTSSEEEEEETTT----------TEE
T ss_pred CCCCcEEE----------EE----------------------ecCCCcceEEECCCCCEEEEEeCCC----------CEE
Confidence 98764211 11 112345789999999988654 333 689
Q ss_pred EEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe---cCCeEEEEeCCCCCceEEEeccc
Q 010051 253 YIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA---TLNSLYIYDTESVPPIAILAGLH 329 (519)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~---~d~~i~vwd~~~~~~~~~~~~~~ 329 (519)
++||+.... ....+ .+...+.+++|+|++ +++++++ .++.|++||+.+++.+..+.. |
T Consensus 183 ~~~d~~~~~-~~~~~-~~~~~~~~~~~~~~g----------------~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~ 243 (391)
T 1l0q_A 183 SVIDTVTNS-VIDTV-KVEAAPSGIAVNPEG----------------TKAYVTNVDKYFNTVSMIDTGTNKITARIPV-G 243 (391)
T ss_dssp EEEETTTTE-EEEEE-ECSSEEEEEEECTTS----------------SEEEEEEECSSCCEEEEEETTTTEEEEEEEC-C
T ss_pred EEEECCCCe-EEEEE-ecCCCccceEECCCC----------------CEEEEEecCcCCCcEEEEECCCCeEEEEEec-C
Confidence 999987542 22223 345678999999998 4455555 578999999999998888876 4
Q ss_pred cccEEEEEEcCCCCEE-EEEeCCCcEEEEEecCCcccceee
Q 010051 330 YAAITDIAWSNNARYL-ALSSQDGYCTLVEFENDELGIPIS 369 (519)
Q Consensus 330 ~~~i~~~~~s~~g~~l-~~~~~dg~i~vwd~~~~~~~~~~~ 369 (519)
. .+.+++|+|+|++| ++++.|+.|++||+.+++....+.
T Consensus 244 ~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 244 P-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred C-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 4 57999999999987 566889999999999886654443
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=6.1e-29 Score=231.91 Aligned_cols=248 Identities=15% Similarity=0.194 Sum_probs=196.8
Q ss_pred EEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 7 QINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 7 ~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
..+.+|.+.|++++|+|++++|++++.||.|+|||+.+++...
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~------------------------------------- 122 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ------------------------------------- 122 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-------------------------------------
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-------------------------------------
Confidence 5667899999999999999999999999999999988664221
Q ss_pred CCCcccceeeeccccCCCCeEEEEE--cCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEee
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQW--STDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLS 164 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 164 (519)
+..|...|++++| ++++.+|++++.||.|++||+++++.+..+..|. .+.++.+. ...+++++
T Consensus 123 ------------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ 187 (368)
T 3mmy_A 123 ------------IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVAT 187 (368)
T ss_dssp ------------EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEE
T ss_pred ------------eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEe
Confidence 1237889999999 8999999999999999999999999988888774 56677766 45888999
Q ss_pred CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe----EEEecCCc
Q 010051 165 SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF----LLVPAGSY 240 (519)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~----l~~~~~~~ 240 (519)
.++.+.+|+++....... .........+..+.+.++... +++++.+
T Consensus 188 ~~~~i~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 237 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFR-----------------------------RIESPLKHQHRCVAIFKDKQNKPTGFALGSIE- 237 (368)
T ss_dssp GGGCEEEEECSSSCEEEE-----------------------------ECCCSCSSCEEEEEEEECTTSCEEEEEEEETT-
T ss_pred CCCcEEEEEeccccchhh-----------------------------hccccccCCCceEEEcccCCCCCCeEEEecCC-
Confidence 999999999976532100 001112233455666665554 7777766
Q ss_pred ceeeeecccceEEEEeccCCC--cccccCCCCCC------------CeEEEEEcCCcccccccCCCCcccccceEEEEEe
Q 010051 241 KISSMSESINSAYIFSRKDLS--RPALQLPGASK------------PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA 306 (519)
Q Consensus 241 ~~~~~~~~~~~i~i~~~~~~~--~~~~~~~~~~~------------~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~ 306 (519)
+.+++|++.... .....+..|.. .|++++|+|++ +++++++
T Consensus 238 ---------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~----------------~~l~s~~ 292 (368)
T 3mmy_A 238 ---------GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH----------------GTLATVG 292 (368)
T ss_dssp ---------SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT----------------CCEEEEE
T ss_pred ---------CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCC----------------CEEEEEc
Confidence 699999997653 23444555554 79999999998 5688888
Q ss_pred cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 307 TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 307 ~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
.||.|++||+.+++++..+.. |...|++++|+|+|++|++++.|+..+.|++...
T Consensus 293 ~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 293 SDGRFSFWDKDARTKLKTSEQ-LDQPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp TTSCEEEEETTTTEEEEECCC-CSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCT
T ss_pred cCCeEEEEECCCCcEEEEecC-CCCCceEEEECCCCCeEEEEecccccccccccCC
Confidence 999999999999999999998 9999999999999999999999987666665443
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.5e-29 Score=228.92 Aligned_cols=257 Identities=9% Similarity=0.056 Sum_probs=190.1
Q ss_pred eEEEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC---------CCceE
Q 010051 68 NILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVN---------KGSVL 138 (519)
Q Consensus 68 ~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~---------~~~~~ 138 (519)
..++....|+.|++||+.++. .+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~------~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSK------TITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSS------CEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred CEEEEECCCCcEEEEECCCCc------EEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 345666779999999998773 333332 356777888887 9999999999999665 45544
Q ss_pred EEec-ccccCeEEEEEcC--CCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecC
Q 010051 139 QILD-AHFHYVQGVAWDP--LSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDE 215 (519)
Q Consensus 139 ~~~~-~h~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (519)
..+. .|...|.+++|+| ++++|++++.||.|++||+++++... ....
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~------------------------------~~~~ 167 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI------------------------------VHSA 167 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE------------------------------EECC
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE------------------------------EEec
Confidence 4443 6778899999999 99999999999999999998765210 1111
Q ss_pred CCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCC-CCCCeEEEEEcCCcccccccCCCCc
Q 010051 216 TLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPG-ASKPVVAVRFCPLAFNLRESNSAGF 294 (519)
Q Consensus 216 ~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~g~ 294 (519)
.+...+.+++|+|+|.++++++.+ +.|++||++........+.. |..+|++++|+|++
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~d----------g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g----------- 226 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPD----------GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNG----------- 226 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTT----------SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTS-----------
T ss_pred CCCCceEEEEECCCCCEEEEEcCC----------CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCC-----------
Confidence 234568899999999999998877 79999999876554356676 99999999999998
Q ss_pred ccccceEEEEEecCCeEEEEeCCCCCceEEEec--cccccE--EEEEEcCCCCEEEEEeC-CCcEEEEEecCCcccceee
Q 010051 295 FKLPYRLIFAIATLNSLYIYDTESVPPIAILAG--LHYAAI--TDIAWSNNARYLALSSQ-DGYCTLVEFENDELGIPIS 369 (519)
Q Consensus 295 ~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~i--~~~~~s~~g~~l~~~~~-dg~i~vwd~~~~~~~~~~~ 369 (519)
.++++++ ++.|++||+++++.+..+.. .|...+ .+++|+|+|++|++++. |+.|+||++..... .+.
T Consensus 227 -----~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~--~~~ 298 (343)
T 3lrv_A 227 -----YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK--NWT 298 (343)
T ss_dssp -----SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC--SEE
T ss_pred -----CEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc--ceE
Confidence 5577777 55999999999877654432 022333 46999999999999998 99999999976532 222
Q ss_pred ecCCcccccCCCCcccccC---CccEEEeecCCcee
Q 010051 370 LSGNKVSKDENKSPLVTKS---EDMIIEASTNDKLV 402 (519)
Q Consensus 370 ~~~~~~~~~~~~~~~~~s~---~~~~l~~~~~d~~i 402 (519)
. ..+..+.|++ +...+++++.++.+
T Consensus 299 ~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~ 326 (343)
T 3lrv_A 299 K--------DEESALCLQSDTADFTDMDVVCGDGGI 326 (343)
T ss_dssp E--------EEEEECCC----CCCCEEEEEEETTEE
T ss_pred e--------cCceeEecCccccccceeEEEecCCce
Confidence 1 2345677777 77788877777665
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-28 Score=234.15 Aligned_cols=246 Identities=11% Similarity=0.070 Sum_probs=192.0
Q ss_pred CCCCCEEEEEEecCCCEE-EEEcCCCcEEEEEec--CCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccC
Q 010051 11 HDTKPVLTLDFHPISGLL-ATGGADYDIKIWLIN--SGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTT 87 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~l-a~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~ 87 (519)
+|.+.|++++|+|++++| |+|+.||.|+|||+. +++.+..+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~------------------------------------ 143 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLR------------------------------------ 143 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEE------------------------------------
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeee------------------------------------
Confidence 577789999999999996 899999999999998 55432211
Q ss_pred CCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEE----EecccccCeEEEEEcCC---CCeE
Q 010051 88 ETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQ----ILDAHFHYVQGVAWDPL---SKYV 160 (519)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~h~~~v~~~~~~~~---~~~l 160 (519)
. ...|...|++++|+|++++|++|+.+|.|++|++.++.... .+.+|...|.+++|+|+ +++|
T Consensus 144 ---------~-~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 213 (450)
T 2vdu_B 144 ---------K-RFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFI 213 (450)
T ss_dssp ---------E-EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEE
T ss_pred ---------e-cccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEE
Confidence 0 01366789999999999999999999999999998876543 77889999999999999 9999
Q ss_pred EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCc
Q 010051 161 ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSY 240 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~ 240 (519)
++++.|+.|++||+.+++... .....+...|.+++|+ ++++|++++.+
T Consensus 214 ~s~~~d~~i~vwd~~~~~~~~------------------------------~~~~~h~~~v~~~~~s-d~~~l~s~~~d- 261 (450)
T 2vdu_B 214 ITSDRDEHIKISHYPQCFIVD------------------------------KWLFGHKHFVSSICCG-KDYLLLSAGGD- 261 (450)
T ss_dssp EEEETTSCEEEEEESCTTCEE------------------------------EECCCCSSCEEEEEEC-STTEEEEEESS-
T ss_pred EEEcCCCcEEEEECCCCceee------------------------------eeecCCCCceEEEEEC-CCCEEEEEeCC-
Confidence 999999999999998764210 0122456789999999 99999998877
Q ss_pred ceeeeecccceEEEEeccCCCcccccCC-------------------------CCCCCeEEEEEcCCcccccccCCCCcc
Q 010051 241 KISSMSESINSAYIFSRKDLSRPALQLP-------------------------GASKPVVAVRFCPLAFNLRESNSAGFF 295 (519)
Q Consensus 241 ~~~~~~~~~~~i~i~~~~~~~~~~~~~~-------------------------~~~~~v~~~~~sp~~~~l~~~~~~g~~ 295 (519)
+.|++||+..... +..+. .....|..++|+|++
T Consensus 262 ---------~~v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~------------ 319 (450)
T 2vdu_B 262 ---------DKIFAWDWKTGKN-LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL------------ 319 (450)
T ss_dssp ---------SEEEEEETTTCCE-EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS------------
T ss_pred ---------CeEEEEECCCCcE-eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC------------
Confidence 6899999876432 22221 234578999999988
Q ss_pred cccceEEEEEe-cCCeEEEEeC--CCC---CceEEEeccccccEEEEEEcCCCCEEEEEeC------CCcEEEEEecCC
Q 010051 296 KLPYRLIFAIA-TLNSLYIYDT--ESV---PPIAILAGLHYAAITDIAWSNNARYLALSSQ------DGYCTLVEFEND 362 (519)
Q Consensus 296 ~~~~~~~~~~~-~d~~i~vwd~--~~~---~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~------dg~i~vwd~~~~ 362 (519)
+++++++ .++.|++|++ ..+ ..+..+.. | ..|.+++|+|++.++++++. +..|.+|.+...
T Consensus 320 ----~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~-~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 320 ----PFVAFFVEATKCIIILEMSEKQKGDLALKQIITF-P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp ----SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC-S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred ----CEEEEEECCCCeEEEEEeccCCCCceeeccEecc-C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 5567777 7899999999 555 56667776 6 88999999996544444343 456899988754
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6.3e-30 Score=239.84 Aligned_cols=310 Identities=13% Similarity=0.082 Sum_probs=191.1
Q ss_pred CCCEEEEEEe---cCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCC
Q 010051 13 TKPVLTLDFH---PISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTET 89 (519)
Q Consensus 13 ~~~V~~~~~s---p~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~ 89 (519)
.....++.|. |++..|++++.++.|.+|+.....................+...+..+.|++.
T Consensus 15 ~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 80 (393)
T 4gq1_A 15 NVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSS-------------- 80 (393)
T ss_dssp TCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTT--------------
T ss_pred CCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCC--------------
Confidence 3456777774 44444444445788999987543321111000000011122333334443321
Q ss_pred cccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceE-----EEecccccCeEEEEEcC--------C
Q 010051 90 GQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVL-----QILDAHFHYVQGVAWDP--------L 156 (519)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~-----~~~~~h~~~v~~~~~~~--------~ 156 (519)
.......|...+....+++++.+|++++.|++|++||+.++... ..+.+|.+.|.+++|+| +
T Consensus 81 -----~~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d 155 (393)
T 4gq1_A 81 -----CSYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLA 155 (393)
T ss_dssp -----CEEECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEE
T ss_pred -----ccccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCC
Confidence 11222335555666677778899999999999999999988653 34678999999999997 7
Q ss_pred CCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCC-eEEE
Q 010051 157 SKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGS-FLLV 235 (519)
Q Consensus 157 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~-~l~~ 235 (519)
+++|++++.|++|+|||+..... +.....+...+.+++|+|++. +|++
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~~~-------------------------------~~~~~~~~~~v~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDEGP-------------------------------ILAGYPLSSPGISVQFRPSNPNQLIV 204 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETTEE-------------------------------EEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCeEEEEECCCCce-------------------------------eeeecCCCCCcEEEEECCCCCceEEe
Confidence 88999999999999999976531 111223457788999999885 6777
Q ss_pred ecCCcceeeeecccceEEEEeccCCCcccc------------------------cCCCCCCCeEEEEEc-CCcccccccC
Q 010051 236 PAGSYKISSMSESINSAYIFSRKDLSRPAL------------------------QLPGASKPVVAVRFC-PLAFNLRESN 290 (519)
Q Consensus 236 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~------------------------~~~~~~~~v~~~~~s-p~~~~l~~~~ 290 (519)
++.+ +.|++||+........ ...+|...+.++.|+ |++
T Consensus 205 ~~~d----------~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg------- 267 (393)
T 4gq1_A 205 GERN----------GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG------- 267 (393)
T ss_dssp EETT----------SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTT-------
T ss_pred cCCC----------CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCC-------
Confidence 7666 6999999875432111 123556667777765 555
Q ss_pred CCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcC--------------------CCCEEEEEeC
Q 010051 291 SAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSN--------------------NARYLALSSQ 350 (519)
Q Consensus 291 ~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~--------------------~g~~l~~~~~ 350 (519)
..+++++.|+.+++||+..+.....+.. |...+..+.++| ++.++++|+.
T Consensus 268 ---------~~l~s~s~d~~i~vwd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 268 ---------SGILAMCKSGAWLRWNLFANNDYNEISD-STMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp ---------CEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred ---------CEEEEEeCCCCEEEEECccCCCCceEee-ecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 6788899999999999998877766665 555555444433 3346778889
Q ss_pred CCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeec
Q 010051 351 DGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAE 405 (519)
Q Consensus 351 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~ 405 (519)
||.|++||+.+++..... .++ ...|.+++|+|||++||+++++++++|.
T Consensus 338 Dg~V~lwd~~~~~~~~~~--~~~----~~~V~svafspdG~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIP--IQL----GMPIVDFCWHQDGSHLAIATEGSVLLTR 386 (393)
T ss_dssp TTEEEEEETTCTTCCEEE--EEC----SSCEEEEEECTTSSEEEEEESSEEEEEE
T ss_pred CCEEEEEECCCCcEEEEe--cCC----CCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 999999999887543332 222 3578999999999999999999998765
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.1e-27 Score=223.48 Aligned_cols=304 Identities=14% Similarity=0.116 Sum_probs=218.9
Q ss_pred eEEecCCCCCEEEEEEecCCCEE-EEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------
Q 010051 6 LQINWHDTKPVLTLDFHPISGLL-ATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC--------- 75 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~~l-a~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------- 75 (519)
+....+| ..+.+++|+|++++| ++++.|+.|++||+.+++....+. +...+.+++|+|+
T Consensus 25 ~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~----------~~~~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 25 TATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP----------AGSSPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp EEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE----------CSSSEEEEEECTTSSEEEEEET
T ss_pred EEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE----------CCCCccceEECCCCCEEEEEEC
Confidence 3344444 669999999999976 677789999999999988765543 2337778888876
Q ss_pred -CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceEEEecccccCeEEEEE
Q 010051 76 -GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFL-LSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAW 153 (519)
Q Consensus 76 -~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 153 (519)
++.|++||+.++ +.+..+. +...+.+++|+|++++| ++++.++.|++||+.+++.+..+..| ..+.+++|
T Consensus 94 ~~~~v~v~d~~~~------~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~ 165 (391)
T 1l0q_A 94 ASSTLSVIDTTSN------TVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAV 165 (391)
T ss_dssp TTTEEEEEETTTT------EEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEE
T ss_pred CCCEEEEEECCCC------eEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEE
Confidence 478999999876 4555554 34578999999999987 67788999999999999988888766 56799999
Q ss_pred cCCCCeE-EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe
Q 010051 154 DPLSKYV-ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF 232 (519)
Q Consensus 154 ~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 232 (519)
+|++++| ++++.++.|++||+++++.. ..+ .+...+.+++|+|+|++
T Consensus 166 ~~dg~~l~~~~~~~~~v~~~d~~~~~~~----------~~~----------------------~~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 166 TPDGTKVYVANFDSMSISVIDTVTNSVI----------DTV----------------------KVEAAPSGIAVNPEGTK 213 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEE----------EEE----------------------ECSSEEEEEEECTTSSE
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCeEE----------EEE----------------------ecCCCccceEECCCCCE
Confidence 9999987 56778999999999876421 100 12346778999999999
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
+++++.+ ...+.+++||+... .....+..+ ..+.+++|+|++..+ +++++.++.|+
T Consensus 214 l~~~~~~-------~~~~~v~~~d~~~~-~~~~~~~~~-~~~~~~~~s~dg~~l---------------~~s~~~d~~v~ 269 (391)
T 1l0q_A 214 AYVTNVD-------KYFNTVSMIDTGTN-KITARIPVG-PDPAGIAVTPDGKKV---------------YVALSFXNTVS 269 (391)
T ss_dssp EEEEEEC-------SSCCEEEEEETTTT-EEEEEEECC-SSEEEEEECTTSSEE---------------EEEETTTTEEE
T ss_pred EEEEecC-------cCCCcEEEEECCCC-eEEEEEecC-CCccEEEEccCCCEE---------------EEEcCCCCEEE
Confidence 9987631 01268999998754 334444444 357899999998432 35667789999
Q ss_pred EEeCCCCCceEEEeccccccEE---EEEEcC------------CC----------CEEEEEeCCCcEEEEEecCCcccce
Q 010051 313 IYDTESVPPIAILAGLHYAAIT---DIAWSN------------NA----------RYLALSSQDGYCTLVEFENDELGIP 367 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~---~~~~s~------------~g----------~~l~~~~~dg~i~vwd~~~~~~~~~ 367 (519)
+||+.+++.+..+.. |..+.. .+.+.| +. ..|...+.|..+++|++..+...
T Consensus 270 v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~-- 346 (391)
T 1l0q_A 270 VIDTATNTITATMAV-GKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS-- 346 (391)
T ss_dssp EEETTTTEEEEEEEC-SSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE--
T ss_pred EEECCCCcEEEEEEC-CcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc--
Confidence 999999998888876 443321 122222 11 23555667888999999766321
Q ss_pred eeecCCcccccCCCCcccccCCccEEEeec
Q 010051 368 ISLSGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
. ..-....|+++|.+.+...
T Consensus 347 -~---------~~~~~~~~~~~g~y~~~~~ 366 (391)
T 1l0q_A 347 -K---------KQNPTHTYSETGIYTVRLT 366 (391)
T ss_dssp -C---------SSSCEECCSSCEEEEEEEE
T ss_pred -C---------cCCCeEEeCCCceEEEEEE
Confidence 0 1113367899998876543
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.5e-28 Score=230.19 Aligned_cols=302 Identities=12% Similarity=0.067 Sum_probs=212.8
Q ss_pred CCEEEEEEecCCC-EEEEEc----CCC----cEEEEEe--cCCccccc--cccccc-cccc------------cccCcc-
Q 010051 14 KPVLTLDFHPISG-LLATGG----ADY----DIKIWLI--NSGEKQKK--IPTASY-QNSL------------SYHGSA- 66 (519)
Q Consensus 14 ~~V~~~~~sp~~~-~la~~~----~dg----~i~iwd~--~~~~~~~~--~~~~~~-~~~~------------~~~~~~- 66 (519)
..|...+|++.|. ++++|+ .+| .|+|||+ .+++.+.. +..... ...+ .++...
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4677888888886 666775 467 8999999 88876532 111100 0000 111000
Q ss_pred eeEEEEccC---C---CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCC---eEEEEEcCCCce
Q 010051 67 INILRFSPC---G---GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDN---SCIIWDVNKGSV 137 (519)
Q Consensus 67 v~~~~~~~~---~---~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~ 137 (519)
-..+++... + +.|++||+... ....+.+|...+.+++|+|||++|++++.++ .|++||+.+++.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~-------~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY-------NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV 215 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC-------SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC-------CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE
Confidence 123333332 3 79999999743 3455667889999999999999999999875 999999999877
Q ss_pred EEEecccccCeEEEEEcCCCCeEE-EeeCCCe--EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeec
Q 010051 138 LQILDAHFHYVQGVAWDPLSKYVA-SLSSDRT--CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHD 214 (519)
Q Consensus 138 ~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (519)
. .+..|...+.+++|+|+|++|+ +++.++. |++||+.+++.. ..
T Consensus 216 ~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~--------------------------------~l 262 (415)
T 2hqs_A 216 R-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--------------------------------QV 262 (415)
T ss_dssp E-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--------------------------------EC
T ss_pred E-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE--------------------------------eC
Confidence 5 4667888999999999999887 6666654 999999876421 11
Q ss_pred CCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCc
Q 010051 215 ETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGF 294 (519)
Q Consensus 215 ~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~ 294 (519)
..+...+.+++|+|||++|++++.... ...+++||..... ...+..+...+..++|+|+|++
T Consensus 263 ~~~~~~~~~~~~spdg~~l~~~s~~~g-------~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~~--------- 324 (415)
T 2hqs_A 263 TDGRSNNTEPTWFPDSQNLAFTSDQAG-------RPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKF--------- 324 (415)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSE---------
T ss_pred cCCCCcccceEECCCCCEEEEEECCCC-------CcEEEEEECCCCC--EEEEecCCCcccCeEECCCCCE---------
Confidence 123456789999999999998775321 1368888886543 3445556678899999999954
Q ss_pred ccccceEEEEEec---CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCC---cEEEEEecCCccccee
Q 010051 295 FKLPYRLIFAIAT---LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDG---YCTLVEFENDELGIPI 368 (519)
Q Consensus 295 ~~~~~~~~~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~vwd~~~~~~~~~~ 368 (519)
|++++. +..|++||+.+++.. .+.. |. .+.+++|+|+|++|++++.++ .|++||+..+. ..
T Consensus 325 -------l~~~~~~~g~~~i~~~d~~~~~~~-~l~~-~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~---~~ 391 (415)
T 2hqs_A 325 -------MVMVSSNGGQQHIAKQDLATGGVQ-VLSS-TF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF---KA 391 (415)
T ss_dssp -------EEEEEECSSCEEEEEEETTTCCEE-ECCC-SS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC---EE
T ss_pred -------EEEEECcCCceEEEEEECCCCCEE-EecC-CC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc---EE
Confidence 444443 358999999988764 4544 43 899999999999999988877 79999987543 33
Q ss_pred eecCCcccccCCCCcccccCCc
Q 010051 369 SLSGNKVSKDENKSPLVTKSED 390 (519)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~s~~~ 390 (519)
.+.++ ...+..++|+|.-
T Consensus 392 ~l~~~----~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 392 RLPAT----DGQVKFPAWSPYL 409 (415)
T ss_dssp ECCCS----SSEEEEEEECCCC
T ss_pred EeeCC----CCCCcCCcccccc
Confidence 33333 2567888888854
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.2e-27 Score=221.05 Aligned_cols=243 Identities=13% Similarity=0.113 Sum_probs=174.6
Q ss_pred eeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeE-EEeeCCCeEEEE
Q 010051 94 KVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYV-ASLSSDRTCRIY 172 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~i~iw 172 (519)
+.+..+..|...|++++|+|||++|++|+.++ +++|++.+++....... ..+..+.+.++++.+ ++++.|+.|++|
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIW 86 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEE
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEE
Confidence 44556677999999999999999999998775 78999988776654432 357788898888877 567788999999
Q ss_pred ecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceE
Q 010051 173 ANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSA 252 (519)
Q Consensus 173 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i 252 (519)
|+.+++... ...+...|.++.|+++. ++++.. +.+
T Consensus 87 d~~~~~~~~--------------------------------~~~~~~~v~~v~~~~~~--~~~~~~-----------~~i 121 (355)
T 3vu4_A 87 DDVKKQDVS--------------------------------RIKVDAPVKDLFLSREF--IVVSYG-----------DVI 121 (355)
T ss_dssp ETTTTEEEE--------------------------------EEECSSCEEEEEECSSE--EEEEET-----------TEE
T ss_pred ECCCCcEEE--------------------------------EEECCCceEEEEEcCCE--EEEEEc-----------CEE
Confidence 998764211 00134568899998864 333332 589
Q ss_pred EEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEE-EecCCeEEEEeCCCCC-----------
Q 010051 253 YIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFA-IATLNSLYIYDTESVP----------- 320 (519)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~-~~~d~~i~vwd~~~~~----------- 320 (519)
++||+......+..+.. +...+++++. .++++ ++.+|.|++||+.++.
T Consensus 122 ~i~d~~~~~~~~~~~~~---~~~~~~~s~~-----------------~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~ 181 (355)
T 3vu4_A 122 SVFKFGNPWKRITDDIR---FGGVCEFSNG-----------------LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQ 181 (355)
T ss_dssp EEEESSTTCCBSSCCEE---EEEEEEEETT-----------------EEEEEESSCTTCEEEEECCC-------------
T ss_pred EEEECCCCceeeEEecc---CCceEEEEcc-----------------EEEEeCCCcCcEEEEEECCCCCccccccccccc
Confidence 99999865333433333 4455666661 22333 6788999999999865
Q ss_pred -----ceEEEeccccccEEEEEEcCCCCEEEEEeCCCc-EEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEE
Q 010051 321 -----PIAILAGLHYAAITDIAWSNNARYLALSSQDGY-CTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIE 394 (519)
Q Consensus 321 -----~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 394 (519)
.+..+.+ |...|++++|+|+|++|++++.||+ |++||+.+++....+.. +. +...+.+++|+|++.+|+
T Consensus 182 ~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~-g~---h~~~v~~~~~s~~~~~l~ 256 (355)
T 3vu4_A 182 KAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR-GL---DRADVVDMKWSTDGSKLA 256 (355)
T ss_dssp -----CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC-TT---CCSCEEEEEECTTSCEEE
T ss_pred cccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-CC---CCCcEEEEEECCCCCEEE
Confidence 2677888 9999999999999999999999998 99999998764433321 20 236899999999999999
Q ss_pred eecCCcee-eecCCCC
Q 010051 395 ASTNDKLV-TAETKEP 409 (519)
Q Consensus 395 ~~~~d~~i-~~~~~~~ 409 (519)
+++.|+.+ +|+....
T Consensus 257 s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 257 VVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEETTCEEEEEESSCC
T ss_pred EEECCCEEEEEEccCC
Confidence 99999887 8876543
No 126
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.2e-28 Score=228.84 Aligned_cols=253 Identities=11% Similarity=0.114 Sum_probs=189.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccc
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKG 181 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 181 (519)
-...|.+++|+|||+++|+++.|++|+ |...++. +.+|...|.+++|+|+| .++.+.+|+......
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~---l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~-- 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD---INCNSKNLFHVKEFPLE-------FENKLDFELAQQNGL-- 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC---CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCS--
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccce---ecCCCccEEEEEECCCC-------CcceEEEEeCCCceE--
Confidence 457899999999999999999999999 7655554 47999999999999998 455555555432221
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
+.. .+...|.+++|||+|.+|++++.+ +.+++|+...
T Consensus 80 ------------------------------~~~-~~~~~V~~vawSPdG~~LAs~s~d----------g~V~iwd~~~-- 116 (588)
T 2j04_A 80 ------------------------------LNS-QPVCYPRVCKPSPIDDWMAVLSNN----------GNVSVFKDNK-- 116 (588)
T ss_dssp ------------------------------STT-SCSCCEEEEEECSSSSCEEEEETT----------SCEEEEETTE--
T ss_pred ------------------------------eec-CCCCcEEEEEECCCCCEEEEEeCC----------CcEEEEeCCc--
Confidence 110 124679999999999999999888 6899999543
Q ss_pred cccccCCCCCC-----CeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCc-------eEEE----
Q 010051 262 RPALQLPGASK-----PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPP-------IAIL---- 325 (519)
Q Consensus 262 ~~~~~~~~~~~-----~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~-------~~~~---- 325 (519)
....+. |.. .+.+++|||+| +++++|+.||+|++||+.++.. +..+
T Consensus 117 -~l~~l~-~~~~~~~~sv~svafSPDG----------------~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~ 178 (588)
T 2j04_A 117 -MLTNLD-SKGNLSSRTYHCFEWNPIE----------------SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD 178 (588)
T ss_dssp -EEEECC-CSSCSTTTCEEEEEECSSS----------------SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC
T ss_pred -eeeecc-CCCccccccEEEEEEcCCC----------------CEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc
Confidence 444455 554 59999999999 5688888899999999998863 5666
Q ss_pred eccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccc-eeee-cCCcccccCCCCcccccCCccEEEeecCCceee
Q 010051 326 AGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGI-PISL-SGNKVSKDENKSPLVTKSEDMIIEASTNDKLVT 403 (519)
Q Consensus 326 ~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 403 (519)
.+ |...|.+++|+|+| |++++.|++|++|++..+.... ...+ .+| ...|.+++|+ |.+|++++++...+
T Consensus 179 ~g-h~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h----~~~V~svaFs--g~~LASa~~~tIkL 249 (588)
T 2j04_A 179 AG-SKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNAS----RRKITDLKIV--DYKVVLTCPGYVHK 249 (588)
T ss_dssp TT-CCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCC----SSCCCCEEEE--TTEEEEECSSEEEE
T ss_pred cc-ccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccc----cCcEEEEEEE--CCEEEEEeCCeEEE
Confidence 44 77899999999999 8888999999999998876431 1223 233 3689999999 68888888766668
Q ss_pred ecCCCCCccccc----------cc--cCCCceEEeccccceeeeeccc
Q 010051 404 AETKEPDKRKTE----------AE--TKDDETAINGSIAAESRLIEPE 439 (519)
Q Consensus 404 ~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~ 439 (519)
|+.......... .. .++...++.+.++++ ++|...
T Consensus 250 Wd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 250 IDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 887654441111 11 344445667777777 777544
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=1.3e-26 Score=224.81 Aligned_cols=316 Identities=12% Similarity=0.071 Sum_probs=227.5
Q ss_pred EEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC---------CeEEEEEc--ccCC
Q 010051 20 DFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG---------GELIIWKL--HTTE 88 (519)
Q Consensus 20 ~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~i~vw~~--~~~~ 88 (519)
+|+|++.++++++.|++|.+||..+++.+..+.. ++. +..++|+|++ +.|.+||+ .++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~--------g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~- 212 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT--------GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP- 212 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC--------STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec--------Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC-
Confidence 4899999999999999999999999987765532 122 6788888874 78899999 554
Q ss_pred CcccceeeeccccCCCCeEEEEEcC----CCCEEEEEeC-CCeEEEEEcCCCceEEEeccc----------c-cCeEEEE
Q 010051 89 TGQAWKVLKNLSFHRKDVLDLQWST----DGAFLLSGSV-DNSCIIWDVNKGSVLQILDAH----------F-HYVQGVA 152 (519)
Q Consensus 89 ~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~h----------~-~~v~~~~ 152 (519)
+.+..+. +...+..++|+| ||++|++++. +++|.+||..+++++..+..+ . ..+..+.
T Consensus 213 -----~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 213 -----TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp -----EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred -----cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 5566665 456789999999 9999999885 899999999999988887642 2 2688999
Q ss_pred EcCCCCe-EEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCC
Q 010051 153 WDPLSKY-VASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGS 231 (519)
Q Consensus 153 ~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 231 (519)
++|++.. +++...++.|.+||+...+..... . + .....+..++|+|+|+
T Consensus 287 ~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~--------~-------------------i---~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 287 ASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT--------S-------------------I---GAAPFLHDGGWDSSHR 336 (543)
T ss_dssp ECSSSSEEEEEETTTTEEEEEECTTSSSCEEE--------E-------------------E---ECCSSCCCEEECTTSC
T ss_pred ECCCCCEEEEEECCCCeEEEEEecCCCcceeE--------E-------------------e---ccCcCccCceECCCCC
Confidence 9997765 566677899999999875421100 0 0 1123466899999999
Q ss_pred eEEEecCCcceeeeecccceEEEEeccCCCcccccCC----CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe-
Q 010051 232 FLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLP----GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA- 306 (519)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~- 306 (519)
++++++... +.|.+||..+.. ....+. .|......+ ++|++. ..++++.
T Consensus 337 ~l~va~~~~---------~~v~v~D~~tg~-l~~~i~~g~~ph~g~g~~~-~~p~~g---------------~~~~s~~~ 390 (543)
T 1nir_A 337 YFMTAANNS---------NKVAVIDSKDRR-LSALVDVGKTPHPGRGANF-VHPKYG---------------PVWSTSHL 390 (543)
T ss_dssp EEEEEEGGG---------TEEEEEETTTTE-EEEEEECSSSBCCTTCEEE-EETTTE---------------EEEEEEBS
T ss_pred EEEEEecCC---------CeEEEEECCCCe-EEEeeccCCCCCCCCCccc-CCCCCc---------------cEEEeccC
Confidence 887765322 689999987643 333332 244333333 467631 3345554
Q ss_pred cCCeEEEEeCCC-------CCceEEEeccccccEEEEEEcCCCCEEEEEe-------CCCcEEEEEecCCccc-ceeeec
Q 010051 307 TLNSLYIYDTES-------VPPIAILAGLHYAAITDIAWSNNARYLALSS-------QDGYCTLVEFENDELG-IPISLS 371 (519)
Q Consensus 307 ~d~~i~vwd~~~-------~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-------~dg~i~vwd~~~~~~~-~~~~~~ 371 (519)
.+++|.+||+.+ ++++.++.. |...+..++|+|+|++|++++ .+++|.|||+.+.+.. ..+.+.
T Consensus 391 ~d~~V~v~d~~~~~~~~~~~~~v~~l~~-~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~ 469 (543)
T 1nir_A 391 GDGSISLIGTDPKNHPQYAWKKVAELQG-QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA 469 (543)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEEC-SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH
T ss_pred CCceEEEEEeCCCCCchhcCeEEEEEEc-CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeech
Confidence 578999999998 899999998 888889999999999999987 3789999999988765 333221
Q ss_pred CCc--ccccCCCCcccccCCccEEEeec------CCceeeecCCCC
Q 010051 372 GNK--VSKDENKSPLVTKSEDMIIEAST------NDKLVTAETKEP 409 (519)
Q Consensus 372 ~~~--~~~~~~~~~~~~s~~~~~l~~~~------~d~~i~~~~~~~ 409 (519)
... ......+..+.|+|+|..+.++. ++.+++|+....
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 470 EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp HHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred hhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 100 01135678899999999988652 234446665543
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.7e-27 Score=207.72 Aligned_cols=223 Identities=14% Similarity=0.116 Sum_probs=155.1
Q ss_pred CCCCEEEEEEecC----CCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccC
Q 010051 12 DTKPVLTLDFHPI----SGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTT 87 (519)
Q Consensus 12 h~~~V~~~~~sp~----~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~ 87 (519)
|...|.+|+|+|| ++++++++. .++||++.+++.+.. ...+|...|..++|+|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~s--------s~~g~d~~V~~~~~s~dG----------- 168 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSS--------SGTLSDQQVEVMTFAEDG----------- 168 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEE--EEEEEEETTTEEEEE--------ESSSTTCEEEEEEECTTS-----------
T ss_pred cccceEEEEECCCccccccEEEeCCC--eEEEEecCCCcEEEe--------cccCCCCcEEEEEECCCC-----------
Confidence 3457889999999 889999874 488999877664322 134456555555555544
Q ss_pred CCcccceeeeccccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCceEEEecccc---cCeEEEEEcCCCCeE-
Q 010051 88 ETGQAWKVLKNLSFHRKDVLDLQWST---DGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF---HYVQGVAWDPLSKYV- 160 (519)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l- 160 (519)
+.+..+.+|...++.++|++ ++.+|++|+.|++|+|||+.+|++++.+.+|. ..+.+++|+|++.++
T Consensus 169 ------~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 169 ------GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp ------CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEE
T ss_pred ------ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEE
Confidence 34445556889999999999 77999999999999999999999999998654 367788999999876
Q ss_pred -----------EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 161 -----------ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 161 -----------~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
++|+.|++|++||..+++... .+... + ...+...+.+.. .+
T Consensus 243 s~s~~~~~w~laSGs~D~tIklWd~~tgk~l~----------v~~~~---------------~-p~Gh~~~~lsg~--~s 294 (356)
T 2w18_A 243 VLSHPCAKESESLRSPVFQLIVINPKTTLSVG----------VMLYC---------------L-PPGQAGRFLEGD--VK 294 (356)
T ss_dssp EEC------------CCEEEEEEETTTTEEEE----------EEEEC---------------C-CTTCCCCEEEEE--EE
T ss_pred EeccCCCcceeeccCCCcEEEEEECCCCEEEE----------EEEee---------------c-cCCCcceeEccc--cC
Confidence 567889999999998775321 00000 0 001111222223 33
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeE-EEEEcCCcccccccCCCCcccccceEEEEEecC
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVV-AVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL 308 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d 308 (519)
+.++++++.+ +.|+|||+... +.+..+.+|...+. .++|+|+| ++|++|+.|
T Consensus 295 g~~lASgS~D----------gTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPDG----------------~~LaSGS~D 347 (356)
T 2w18_A 295 DHCAAAILTS----------GTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGTD----------------SHLLAGQKD 347 (356)
T ss_dssp TTEEEEEETT----------SCEEEEETTTC-SEEEEECCC--CCCCEEEECSSS----------------SEEEEECTT
T ss_pred CCEEEEEcCC----------CcEEEEECCCC-cEEEEecCCCCCeEEEEEECCCC----------------CEEEEEECC
Confidence 7778887766 69999999754 56677888877655 68999999 668888899
Q ss_pred CeEEEEeC
Q 010051 309 NSLYIYDT 316 (519)
Q Consensus 309 ~~i~vwd~ 316 (519)
++|+|||+
T Consensus 348 ~TIklWd~ 355 (356)
T 2w18_A 348 GNIFVYHY 355 (356)
T ss_dssp SCEEEEEE
T ss_pred CcEEEecC
Confidence 99999995
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1.5e-26 Score=236.24 Aligned_cols=320 Identities=14% Similarity=0.135 Sum_probs=216.0
Q ss_pred CCCEEEEEEecCCCEEEEEcC-CC-----cEEEEEecCCccccccccccccc---ccc------------ccCcceeEEE
Q 010051 13 TKPVLTLDFHPISGLLATGGA-DY-----DIKIWLINSGEKQKKIPTASYQN---SLS------------YHGSAINILR 71 (519)
Q Consensus 13 ~~~V~~~~~sp~~~~la~~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~~---~~~------------~~~~~v~~~~ 71 (519)
...|.+++|||||++||+++. |+ .|++||+.+++....+....... .+. .....+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999988 88 89999999887654332110000 000 0003478899
Q ss_pred EccCC--------CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc
Q 010051 72 FSPCG--------GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA 143 (519)
Q Consensus 72 ~~~~~--------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 143 (519)
|+|++ +.|.+||+.++... ....+..|...+.+++|||||++|++++ ++.|++||+.+++.......
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~----~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKA----AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTT----SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcc----eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 99986 57889998765100 2345566788899999999999999887 46899999998877665544
Q ss_pred cccC----------------eEEEEEcCCCCeEEEeeCCC---------------------------------eEEEEec
Q 010051 144 HFHY----------------VQGVAWDPLSKYVASLSSDR---------------------------------TCRIYAN 174 (519)
Q Consensus 144 h~~~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~iwd~ 174 (519)
+... +..+.|+|||++|++++.|+ .|.+||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 4332 47799999999999987765 6667776
Q ss_pred CC-CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEE
Q 010051 175 RP-TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAY 253 (519)
Q Consensus 175 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~ 253 (519)
.+ ++.... .....+...+..++| |||++|+++..+. ......|+
T Consensus 271 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~-pDg~~l~~~~~~~-----~~~~~~i~ 315 (741)
T 2ecf_A 271 AEQAQTQWI-----------------------------DLGKEQDIYLARVNW-RDPQHLSFQRQSR-----DQKKLDLV 315 (741)
T ss_dssp STTCCCEEE-----------------------------CCCSCSSEEEEEEEE-EETTEEEEEEEET-----TSSEEEEE
T ss_pred CCCCceEEe-----------------------------cCCCCcceEEEEEEe-CCCCEEEEEEecc-----cCCeEEEE
Confidence 65 432100 000134567889999 9999999865421 11235899
Q ss_pred EEeccCCCcccccCCCCCC----CeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC-CCCceEEEecc
Q 010051 254 IFSRKDLSRPALQLPGASK----PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE-SVPPIAILAGL 328 (519)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~----~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~-~~~~~~~~~~~ 328 (519)
+||..+... ...+..+.. .+..++|+|||+ +++++..++.++||.+. .+. ...+..
T Consensus 316 ~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~spdg~----------------~~~~~~~~g~~~l~~~~~~~~-~~~l~~- 376 (741)
T 2ecf_A 316 EVTLASNQQ-RVLAHETSPTWVPLHNSLRFLDDGS----------------ILWSSERTGFQHLYRIDSKGK-AAALTH- 376 (741)
T ss_dssp EEETTTCCE-EEEEEEECSSCCCCCSCCEECTTSC----------------EEEEECTTSSCEEEEECSSSC-EEESCC-
T ss_pred EEECCCCce-EEEEEcCCCCcCCcCCceEECCCCe----------------EEEEecCCCccEEEEEcCCCC-eeeeee-
Confidence 999876432 222222222 345789999984 46666667766666554 344 666766
Q ss_pred ccccEEEE-EEcCCCCEEEE-EeCCC--cEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeec
Q 010051 329 HYAAITDI-AWSNNARYLAL-SSQDG--YCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 329 ~~~~i~~~-~~s~~g~~l~~-~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
|...|..+ .|+|+|+.|+. ++.++ .++||++..... ....+.. ...+..+.|||||.+|+...
T Consensus 377 ~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~-~~~~l~~-----~~~~~~~~~spdg~~l~~~~ 443 (741)
T 2ecf_A 377 GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG-QPQRLSK-----APGMHSASFARNASVYVDSW 443 (741)
T ss_dssp SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC-CCEECCC-----SCSEEEEEECTTSSEEEEEE
T ss_pred cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC-Ceeeccc-----CCCceEEEECCCCCEEEEEe
Confidence 77788887 59999987755 44455 899999975211 1222222 23456899999999887664
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=6.1e-26 Score=239.20 Aligned_cols=348 Identities=12% Similarity=0.079 Sum_probs=237.6
Q ss_pred CCCeeEEecCCCCCEEEEEEecCCCEEEEEcCC------CcEEEEEecCCccccccccccccccccccCcce-------e
Q 010051 2 KGGTLQINWHDTKPVLTLDFHPISGLLATGGAD------YDIKIWLINSGEKQKKIPTASYQNSLSYHGSAI-------N 68 (519)
Q Consensus 2 ~~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v-------~ 68 (519)
.++..+.+..|...|.+++|||||++||+++.+ ..|++|++.+++.. .+..|...+ .
T Consensus 41 ~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~----------~lt~~~~~~~~~~~~~~ 110 (1045)
T 1k32_A 41 KSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK----------RITYFSGKSTGRRMFTD 110 (1045)
T ss_dssp TTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE----------ECCCCCEEEETTEECSE
T ss_pred CCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeE----------EcccCCCcccccccccc
Confidence 466777788899999999999999999987543 47999999877532 255677777 8
Q ss_pred EEEEccCCC---------------eEEEEEcccCCCcc--------------------------cc--------------
Q 010051 69 ILRFSPCGG---------------ELIIWKLHTTETGQ--------------------------AW-------------- 93 (519)
Q Consensus 69 ~~~~~~~~~---------------~i~vw~~~~~~~~~--------------------------~~-------------- 93 (519)
.++|+|++. .|.+|++..+.... .+
T Consensus 111 ~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~ 190 (1045)
T 1k32_A 111 VAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIE 190 (1045)
T ss_dssp EEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEE
T ss_pred cccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEE
Confidence 899999863 35556654432100 00
Q ss_pred ---eeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceEEEecccccCeEEEEEcCCCCeEEEeeCCCeE
Q 010051 94 ---KVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK-GSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTC 169 (519)
Q Consensus 94 ---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 169 (519)
.....+.+|...+.++.|+++ .++++++.++.+.||.+.. +.....+..|. .+..++|+|+|++|+++ .++.|
T Consensus 191 ~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i 267 (1045)
T 1k32_A 191 VNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSI 267 (1045)
T ss_dssp EETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEE
T ss_pred CCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEE
Confidence 011233567888999999988 6667777889888998754 44455566564 46678999999999887 48999
Q ss_pred EEEecCCCCccccccc------------cceeeEEEe-ccCcccccCCccccc--------eeeecCCCcc-eeeEEEEc
Q 010051 170 RIYANRPTKSKGVEKM------------NYVCQHVIT-KAGQHSTDDSKSAKN--------HLFHDETLPS-FFRRLAWS 227 (519)
Q Consensus 170 ~iwd~~~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~-~i~~~~~s 227 (519)
.+|++........... .......++ +.+..+.... .... .......+.. .+..++|+
T Consensus 268 ~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s 346 (1045)
T 1k32_A 268 YIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD 346 (1045)
T ss_dssp EEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS
T ss_pred EEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc
Confidence 9999844322211100 011122333 3333222111 0000 1111223334 67788888
Q ss_pred cCCCeEEEecCCcceeeeecccceEE-EEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAY-IFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA 306 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~-i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~ 306 (519)
+|+.+++++.+ ..++ +|+..... ...+.+|...+..++|+|+| +++++++
T Consensus 347 -dg~~l~~~s~~----------~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG----------------~~la~~~ 397 (1045)
T 1k32_A 347 -TKVAFIHGTRE----------GDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNG----------------KFAVVAN 397 (1045)
T ss_dssp -SEEEEEEEETT----------EEEEEEEETTTCC--EEECCCCCCSEEEEEECTTS----------------SEEEEEE
T ss_pred -CCCeEEEEECC----------CceEEEEECCCCC--ceEecCCccceeeeEECCCC----------------CEEEEEC
Confidence 88888776553 4777 88876432 23344777889999999999 5577777
Q ss_pred cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCC----------cEEEEEecCCcccceeeecCCccc
Q 010051 307 TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDG----------YCTLVEFENDELGIPISLSGNKVS 376 (519)
Q Consensus 307 ~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg----------~i~vwd~~~~~~~~~~~~~~~~~~ 376 (519)
.++.|++||+.+++....+.. |...+.+++|||||++|++++.++ .|++||+.+++ ...+..+.
T Consensus 398 ~~~~v~~~d~~tg~~~~~~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~-- 471 (1045)
T 1k32_A 398 DRFEIMTVDLETGKPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTEN-- 471 (1045)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSS--
T ss_pred CCCeEEEEECCCCceEEeccC-CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCC--
Confidence 888999999999988877767 888999999999999999887654 89999998764 23333332
Q ss_pred ccCCCCcccccCCccEEEeecCCc
Q 010051 377 KDENKSPLVTKSEDMIIEASTNDK 400 (519)
Q Consensus 377 ~~~~~~~~~~s~~~~~l~~~~~d~ 400 (519)
..+..++|+|||.+|++.+.+.
T Consensus 472 --~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 472 --SHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp --SBEEEEEECTTSCEEEEEESCC
T ss_pred --cccCCceEcCCCCEEEEEeccc
Confidence 3456689999999998887643
No 131
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=3.1e-26 Score=233.26 Aligned_cols=344 Identities=8% Similarity=0.014 Sum_probs=208.5
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCc---ceeEEEEccCC--------------
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGS---AINILRFSPCG-------------- 76 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~-------------- 76 (519)
..+.+++|+|||+++++ +.||.|++||+.+++....+ ..|.. .|..++|+|++
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~---------~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI---------EGKKIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE---------CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe---------ccccccccccceEEECCCCCEEEEEecCcccee
Confidence 34788999999998876 68999999999998765432 22332 48889999984
Q ss_pred ----CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCe----
Q 010051 77 ----GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYV---- 148 (519)
Q Consensus 77 ----~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v---- 148 (519)
+.|.+||+.++.. ..+....+|...+..++|||||++|++++. +.|++||+.+++.......+...+
T Consensus 87 ~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g 161 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDP----QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNG 161 (723)
T ss_dssp SCCCSEEEEEESSSCCC----EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEE
T ss_pred ecceeeEEEEECCCCce----EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECc
Confidence 4566999877632 233334456666889999999999999886 799999999988776665544433
Q ss_pred --------------EEEEEcCCCCeEEEeeCC-CeEEEEecCCCCccccccccceeeEEEeccCcc-----c-ccCCccc
Q 010051 149 --------------QGVAWDPLSKYVASLSSD-RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQH-----S-TDDSKSA 207 (519)
Q Consensus 149 --------------~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~ 207 (519)
.+++|+|||++|++++.| +.+.+|++.......... .....+...+.. + .......
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPT---VKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCC---CEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred ccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCc---ceeccCCCCCCCCCeeEEEEEECCCC
Confidence 789999999999988765 345555543221110000 000000000000 0 0000000
Q ss_pred c-ceeeec----CCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCe----EEEE
Q 010051 208 K-NHLFHD----ETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPV----VAVR 278 (519)
Q Consensus 208 ~-~~~~~~----~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v----~~~~ 278 (519)
. ...+.. ..+...+..++|+|||+++++..... .....+++||+.+..........+...+ ..++
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 312 (723)
T 1xfd_A 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA------QNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPV 312 (723)
T ss_dssp CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT------SCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCE
T ss_pred ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC------CCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCce
Confidence 0 000000 01245688999999999887654321 1225789999875432211111222333 3789
Q ss_pred EcCCcccccccCCCCcccccceEEEEEecCC------eEEEEe-CCCCCc--eEEEeccccccEEE-EEEcCCCCEEEEE
Q 010051 279 FCPLAFNLRESNSAGFFKLPYRLIFAIATLN------SLYIYD-TESVPP--IAILAGLHYAAITD-IAWSNNARYLALS 348 (519)
Q Consensus 279 ~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~------~i~vwd-~~~~~~--~~~~~~~~~~~i~~-~~~s~~g~~l~~~ 348 (519)
|+|||+.|+ +++...++ .|++|| ..++.. ...+.. +...+.. ++|+|||++|+..
T Consensus 313 ~spdg~~l~--------------~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~ 377 (723)
T 1xfd_A 313 FSKDGRKFF--------------FIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS-GDWDVTKILAYDEKGNKIYFL 377 (723)
T ss_dssp ECTTSCSEE--------------EEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC-SSSCEEEEEEEETTTTEEEEE
T ss_pred EcCCCCeEE--------------EEEecccCCCcceeEEEEEeccCCCCccceeEeec-CCeEEEeeeEEcCCCCEEEEE
Confidence 999996542 11234455 677888 444441 444443 3344554 6999999999876
Q ss_pred eCC---CcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeec
Q 010051 349 SQD---GYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 349 ~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
+.+ +.++||++..........+.... .+...+..++|+|||++|+...
T Consensus 378 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 378 STEDLPRRRQLYSANTVGNFNRQCLSCDL-VENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp ESSSCTTCCEEEEECSSTTCCCBCSSTTS-SSSCCCCEEEECTTSSEEEEEC
T ss_pred EcCCCCcceEEEEEeCCCCCCcceecccc-cCCCCeEEEEECCCCCEEEEEc
Confidence 655 78999999754321222222110 0134577899999999888654
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=6.4e-25 Score=198.03 Aligned_cols=253 Identities=13% Similarity=0.054 Sum_probs=187.5
Q ss_pred CCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceEEEeccc-ccCeEEEE
Q 010051 75 CGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK-GSVLQILDAH-FHYVQGVA 152 (519)
Q Consensus 75 ~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h-~~~v~~~~ 152 (519)
.++.|++||+.++ +. ..+..|...+.+++|+|+|++|++++ ++.|++||+.+ ++....+..+ ...+.+++
T Consensus 20 ~~~~i~~~d~~~~------~~-~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 20 MRSSIEIFNIRTR------KM-RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp CCEEEEEEETTTT------EE-EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred cceeEEEEeCCCC------ce-eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 4688999999876 22 34455888999999999999999987 78999999999 8877766665 36788999
Q ss_pred EcCCCCeEEEee--CCCeEEEEec--CCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc
Q 010051 153 WDPLSKYVASLS--SDRTCRIYAN--RPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP 228 (519)
Q Consensus 153 ~~~~~~~l~~~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 228 (519)
|+|++++|++++ .++...+|.+ ....... + .....+..++|+|
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~------------------------------~---~~~~~~~~~~~sp 138 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRL------------------------------M---TKNLPSYWHGWSP 138 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEE------------------------------C---CSSSSEEEEEECT
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEE------------------------------e---ecCCCccceEECC
Confidence 999999999998 3455566654 3332100 0 1112367889999
Q ss_pred CCCeEEEec-CCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE-e
Q 010051 229 DGSFLLVPA-GSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI-A 306 (519)
Q Consensus 229 ~g~~l~~~~-~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~-~ 306 (519)
+|++|++.. .+ +.+.+|++.........+..+...+.++.|+|++.. ++.+ .
T Consensus 139 dg~~l~~~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----------------l~~~~~ 192 (297)
T 2ojh_A 139 DGKSFTYCGIRD----------QVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRW----------------IYFNSS 192 (297)
T ss_dssp TSSEEEEEEEET----------TEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSE----------------EEEEEC
T ss_pred CCCEEEEEECCC----------CceEEEEEECCCCcceEcccCCCccccceECCCCCE----------------EEEEec
Confidence 999988543 33 567777765444445666777889999999999843 4433 3
Q ss_pred cCCeEEEEeCC-CCCceEEEeccccccEEEEEEcCCCCEEEEEeCC-----------CcEEEEEecCCcccceeeecCCc
Q 010051 307 TLNSLYIYDTE-SVPPIAILAGLHYAAITDIAWSNNARYLALSSQD-----------GYCTLVEFENDELGIPISLSGNK 374 (519)
Q Consensus 307 ~d~~i~vwd~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~~~~~~ 374 (519)
.++.+++|++. .+..+..+.. |...+..++|+|+|++|++++.+ +.|++||+.+++........++
T Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~- 270 (297)
T 2ojh_A 193 RTGQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG- 270 (297)
T ss_dssp TTSSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES-
T ss_pred CCCCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC-
Confidence 57788888876 4556667766 77889999999999999988876 5699999988765444443333
Q ss_pred ccccCCCCcccccCCccEEEeecCC
Q 010051 375 VSKDENKSPLVTKSEDMIIEASTND 399 (519)
Q Consensus 375 ~~~~~~~~~~~~s~~~~~l~~~~~d 399 (519)
...+..++|+|++.+|++++.+
T Consensus 271 ---~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 271 ---QGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp ---TTTSCSCCBCTTSSEEEEEEEC
T ss_pred ---CcccccceECCCCCEEEEEEec
Confidence 2578889999999999887755
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=1.3e-24 Score=210.99 Aligned_cols=282 Identities=12% Similarity=0.145 Sum_probs=203.2
Q ss_pred EEEEEEecCCCEEEEEcCCCcEEEEEe--cCCccccccccccccccccccCcceeEEEEcc----CC----------CeE
Q 010051 16 VLTLDFHPISGLLATGGADYDIKIWLI--NSGEKQKKIPTASYQNSLSYHGSAINILRFSP----CG----------GEL 79 (519)
Q Consensus 16 V~~~~~sp~~~~la~~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~----------~~i 79 (519)
+.+++|+|||++|++++.|+.|++||+ .+++.+..+. +...+..++|+| ++ +.|
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~----------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK----------IGIEARSVESSKFKGYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE----------CCSEEEEEEECCSTTCTTTEEEEEEEESSEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe----------cCCCcceEEeCCCcCCCCCEEEEEEccCCeE
Confidence 899999999999999999999999999 7776655433 345678888888 74 778
Q ss_pred EEEEcccCCCcccceeeecccc----------C-CCCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCceEE--Eecccc
Q 010051 80 IIWKLHTTETGQAWKVLKNLSF----------H-RKDVLDLQWSTDGAF-LLSGSVDNSCIIWDVNKGSVLQ--ILDAHF 145 (519)
Q Consensus 80 ~vw~~~~~~~~~~~~~~~~~~~----------~-~~~v~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~~~~--~~~~h~ 145 (519)
.|||..+. +.+..+.. | ...+..+.++|++.. +++...++.|.+||+.+++.+. .+ .+.
T Consensus 251 ~v~D~~t~------~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~ 323 (543)
T 1nir_A 251 AIMDGETL------EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAA 323 (543)
T ss_dssp EEEETTTC------CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECC
T ss_pred EEEecccc------ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccC
Confidence 88998766 34444332 2 237899999998765 5566678999999998876543 33 355
Q ss_pred cCeEEEEEcCCCCeEEEee-CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEE
Q 010051 146 HYVQGVAWDPLSKYVASLS-SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRL 224 (519)
Q Consensus 146 ~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (519)
..+.++.|+|++++|++++ .+++|.+||+.+++.... +.. ....|.+....+
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~----------i~~-----------------g~~ph~g~g~~~ 376 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL----------VDV-----------------GKTPHPGRGANF 376 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE----------EEC-----------------SSSBCCTTCEEE
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEe----------ecc-----------------CCCCCCCCCccc
Confidence 6788999999999877655 589999999998753211 100 000122222222
Q ss_pred EEccC-CCeEEEec-CCcceeeeecccceEEEEeccCC------CcccccCCCCCCCeEEEEEcCCcccccccCCCCccc
Q 010051 225 AWSPD-GSFLLVPA-GSYKISSMSESINSAYIFSRKDL------SRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFK 296 (519)
Q Consensus 225 ~~sp~-g~~l~~~~-~~~~~~~~~~~~~~i~i~~~~~~------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~ 296 (519)
++|+ |..++++. ++ +.|.+|+.... .+.+..+..|...+..++|+|++++
T Consensus 377 -~~p~~g~~~~s~~~~d----------~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~----------- 434 (543)
T 1nir_A 377 -VHPKYGPVWSTSHLGD----------GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH----------- 434 (543)
T ss_dssp -EETTTEEEEEEEBSSS----------SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE-----------
T ss_pred -CCCCCccEEEeccCCC----------ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc-----------
Confidence 4677 44444443 33 68999999762 3556777788888889999999955
Q ss_pred ccceEEEEEe-------cCCeEEEEeCCCCCce-EEE--------eccccccEEEEEEcCCCCEEEEEe-----CCCcEE
Q 010051 297 LPYRLIFAIA-------TLNSLYIYDTESVPPI-AIL--------AGLHYAAITDIAWSNNARYLALSS-----QDGYCT 355 (519)
Q Consensus 297 ~~~~~~~~~~-------~d~~i~vwd~~~~~~~-~~~--------~~~~~~~i~~~~~s~~g~~l~~~~-----~dg~i~ 355 (519)
|++++ .+++|.+||+.+++.. ..+ .. +...+..+.|+|+|++|+++. .|+.|.
T Consensus 435 -----l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~ 508 (543)
T 1nir_A 435 -----LYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE-GAKRVVQPEYNKRGDEVWFSVWNGKNDSSALV 508 (543)
T ss_dssp -----EEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCS-SCCEEEEEEECSSSSEEEEEEECCTTSCCEEE
T ss_pred -----EEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCC-CCCceEeccCCCCCCEEEEEeecCCCCCCeEE
Confidence 44444 2569999999999887 444 23 567899999999999988763 479999
Q ss_pred EEEecCCcccceee
Q 010051 356 LVEFENDELGIPIS 369 (519)
Q Consensus 356 vwd~~~~~~~~~~~ 369 (519)
|||..++++...+.
T Consensus 509 v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 509 VVDDKTLKLKAVVK 522 (543)
T ss_dssp EEETTTTEEEEEEC
T ss_pred EEECCCceEEEeec
Confidence 99999987655443
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.4e-24 Score=204.64 Aligned_cols=257 Identities=14% Similarity=0.062 Sum_probs=189.9
Q ss_pred ecCCCCCEEEEEEec--------------CCCEEEEEcCC------CcEEEEEecCCccccccccccccccccccCccee
Q 010051 9 NWHDTKPVLTLDFHP--------------ISGLLATGGAD------YDIKIWLINSGEKQKKIPTASYQNSLSYHGSAIN 68 (519)
Q Consensus 9 ~~~h~~~V~~~~~sp--------------~~~~la~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 68 (519)
+.+|...+.++++++ .+..|+.++.+ +.|++||+..+. . ..+..|...+.
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~---------~~l~~~~~~v~ 182 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-Q---------FVVHRSPQPLM 182 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS-C---------EEEEEESSCEE
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC-C---------EEEeCCCCcce
Confidence 456667777777765 15666666554 799999997543 2 23556888999
Q ss_pred EEEEccCC------------CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEE-EEeCCC--eEEEEEcC
Q 010051 69 ILRFSPCG------------GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLL-SGSVDN--SCIIWDVN 133 (519)
Q Consensus 69 ~~~~~~~~------------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg--~i~vwd~~ 133 (519)
+++|+|++ ..|++||+.++ +. ..+..|...+.+++|+|||++|+ +++.++ .|++||+.
T Consensus 183 ~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg------~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 183 SPAWSPDGSKLAYVTFESGRSALVIQTLANG------AV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTC------CE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred eeEEcCCCCEEEEEEecCCCcEEEEEECCCC------cE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 99999985 38899999876 22 24556788999999999999888 666555 49999998
Q ss_pred CCceEEEecccccCeEEEEEcCCCCeEEEeeC-CC--eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccce
Q 010051 134 KGSVLQILDAHFHYVQGVAWDPLSKYVASLSS-DR--TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNH 210 (519)
Q Consensus 134 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (519)
+++. ..+..|...+.+++|+|++++|++++. ++ .|.+||+.+++...
T Consensus 256 ~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~----------------------------- 305 (415)
T 2hqs_A 256 SGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR----------------------------- 305 (415)
T ss_dssp TCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-----------------------------
T ss_pred CCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-----------------------------
Confidence 8876 567778889999999999999988876 45 67777887654211
Q ss_pred eeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccC
Q 010051 211 LFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESN 290 (519)
Q Consensus 211 ~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 290 (519)
...+...+..++|+|+|++|++++.+. ....+++||+..... ..+..+. .+.+++|+|+|+
T Consensus 306 ---l~~~~~~~~~~~~spdG~~l~~~~~~~-------g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~spdg~------ 366 (415)
T 2hqs_A 306 ---ITWEGSQNQDADVSSDGKFMVMVSSNG-------GQQHIAKQDLATGGV--QVLSSTF-LDETPSLAPNGT------ 366 (415)
T ss_dssp ---CCCSSSEEEEEEECTTSSEEEEEEECS-------SCEEEEEEETTTCCE--EECCCSS-SCEEEEECTTSS------
T ss_pred ---EecCCCcccCeEECCCCCEEEEEECcC-------CceEEEEEECCCCCE--EEecCCC-CcCCeEEcCCCC------
Confidence 011234577899999999999876431 125899999975432 3455554 899999999994
Q ss_pred CCCcccccceEEEEEecCC---eEEEEeCCCCCceEEEeccccccEEEEEEcCCCC
Q 010051 291 SAGFFKLPYRLIFAIATLN---SLYIYDTESVPPIAILAGLHYAAITDIAWSNNAR 343 (519)
Q Consensus 291 ~~g~~~~~~~~~~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 343 (519)
+|++++.++ .|++||+. +.....+.. |.+.|.+++|+|.-.
T Consensus 367 ----------~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~-~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 367 ----------MVIYSSSQGMGSVLNLVSTD-GRFKARLPA-TDGQVKFPAWSPYLH 410 (415)
T ss_dssp ----------EEEEEEEETTEEEEEEEETT-SCCEEECCC-SSSEEEEEEECCCCC
T ss_pred ----------EEEEEEcCCCccEEEEEECC-CCcEEEeeC-CCCCCcCCccccccc
Confidence 455555554 89999987 556677777 889999999999753
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=5.5e-25 Score=223.30 Aligned_cols=323 Identities=14% Similarity=0.130 Sum_probs=205.7
Q ss_pred CEEEEEEecCCCEEEEEcCCCcEEEEEecCCccc-ccccccc-ccccc-------cccCcceeEEEEccC-------CCe
Q 010051 15 PVLTLDFHPISGLLATGGADYDIKIWLINSGEKQ-KKIPTAS-YQNSL-------SYHGSAINILRFSPC-------GGE 78 (519)
Q Consensus 15 ~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~-~~~~~~~-~~~~~-------~~~~~~v~~~~~~~~-------~~~ 78 (519)
.+..+.|+ |+.+++++.++ | +||+.+++.. ..+.... ....+ ..+...+.+++|+|+ ++.
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~~~~ 102 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFTQGG 102 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEETTE
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEECCE
Confidence 35667888 66777777787 8 9999998862 2221100 00000 011245888889887 467
Q ss_pred EEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-----CceEEEecccccC------
Q 010051 79 LIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK-----GSVLQILDAHFHY------ 147 (519)
Q Consensus 79 i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-----~~~~~~~~~h~~~------ 147 (519)
|++||+.++ +. ..+..+...+.+++|||||++|+++ .++.|++||+.+ ++.......+...
T Consensus 103 i~~~d~~~~------~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 103 LVGFDMLAR------KV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp EEEEETTTT------EE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC
T ss_pred EEEEECCCC------ce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc
Confidence 889999765 22 2334466778899999999999985 679999999998 8776655444333
Q ss_pred --------eEEEEEcCCCCeEEEee---------------------------------CCCeEEEEecCCCCcccccccc
Q 010051 148 --------VQGVAWDPLSKYVASLS---------------------------------SDRTCRIYANRPTKSKGVEKMN 186 (519)
Q Consensus 148 --------v~~~~~~~~~~~l~~~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~ 186 (519)
+.++.|+|||++|++++ .+..|.+||+.+++...
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~----- 249 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY----- 249 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE-----
T ss_pred hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe-----
Confidence 47899999999999987 34668888887653211
Q ss_pred ceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCccccc
Q 010051 187 YVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQ 266 (519)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 266 (519)
+.....+...+..++|+|||++|++++.+. ......+++||..+.......
T Consensus 250 ------------------------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 250 ------------------------LQTGEPKEKFLTNLSWSPDENILYVAEVNR-----AQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp ------------------------CCCCSCTTCEEEEEEECTTSSEEEEEEECT-----TSCEEEEEEEETTTCCEEEEE
T ss_pred ------------------------eccCCCCceeEeeEEEECCCCEEEEEEeCC-----CCCeeEEEEEECCCCceeeEE
Confidence 001112345688999999999998865431 112247889998765222111
Q ss_pred CC-CCC---CCeEEEEEcC--CcccccccCCCCcccccceEEEEEecCCeEEEEeCC-CCCceEEEeccccccEEE-EEE
Q 010051 267 LP-GAS---KPVVAVRFCP--LAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE-SVPPIAILAGLHYAAITD-IAW 338 (519)
Q Consensus 267 ~~-~~~---~~v~~~~~sp--~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~i~~-~~~ 338 (519)
.. .+. ..+..+.|+| +| ++++++..++.+++|.+. ++..+..+.. |...+.. ++|
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg----------------~~l~~~~~~g~~~l~~~~~~~~~~~~l~~-~~~~v~~~~~~ 363 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNN----------------QFIWQSRRDGWNHLYLYDTTGRLIRQVTK-GEWEVTNFAGF 363 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSS----------------EEEEEECTTSSCEEEEEETTSCEEEECCC-SSSCEEEEEEE
T ss_pred EEccCCCeECccCCceeecCCCC----------------EEEEEEccCCccEEEEEECCCCEEEecCC-CCeEEEeeeEE
Confidence 11 111 2345789999 88 556677777788888775 5666777766 7777877 799
Q ss_pred cCCCCEEEEEeCC-C----cEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCC----c-eeeecCCC
Q 010051 339 SNNARYLALSSQD-G----YCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTND----K-LVTAETKE 408 (519)
Q Consensus 339 s~~g~~l~~~~~d-g----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d----~-~i~~~~~~ 408 (519)
+|+|+.|+.++.+ + .|..|++.++.. ..+. ....+..++|||||.+++....+ . +.+|+...
T Consensus 364 spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~---~~l~-----~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 364 DPKGTRLYFESTEASPLERHFYCIDIKGGKT---KDLT-----PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp CTTSSEEEEEESSSCTTCBEEEEEETTCCCC---EESC-----CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred cCCCCEEEEEecCCCCceEEEEEEEcCCCCc---eecc-----CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 9999987766554 4 455555555432 1221 12456789999999988776432 2 44665443
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=1.7e-23 Score=191.93 Aligned_cols=285 Identities=12% Similarity=0.040 Sum_probs=191.4
Q ss_pred EEEecCCCE-EEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccceeee
Q 010051 19 LDFHPISGL-LATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLK 97 (519)
Q Consensus 19 ~~~sp~~~~-la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~ 97 (519)
..|++++++ +++++.++.|++||..+++....
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~----------------------------------------------- 35 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQ----------------------------------------------- 35 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEE-----------------------------------------------
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeee-----------------------------------------------
Confidence 356666664 56777788999999887764321
Q ss_pred ccccCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCce-EEEecccccCeEEEEEcCCCCeEEEeeCCC---eEEEE
Q 010051 98 NLSFHRKDVLDLQWSTDGAFLLSGSV-DNSCIIWDVNKGSV-LQILDAHFHYVQGVAWDPLSKYVASLSSDR---TCRIY 172 (519)
Q Consensus 98 ~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg---~i~iw 172 (519)
+..+...+ .++|+|+|++|++++. ++.|++||+.+++. ...+..+..+..+++|+|++++|+++..++ .|.+|
T Consensus 36 -~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 36 -ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp -EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEE
T ss_pred -EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEE
Confidence 11134445 8999999997777666 88999999999987 777776766665599999999999655553 89999
Q ss_pred ecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccce-
Q 010051 173 ANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINS- 251 (519)
Q Consensus 173 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~- 251 (519)
|+.+++.... + .....+..++|+|+|++++++.... +.
T Consensus 114 d~~~~~~~~~----------~----------------------~~~~~~~~~~~spdg~~l~~~~~~~---------~~~ 152 (331)
T 3u4y_A 114 SFLKNKFIST----------I----------------------PIPYDAVGIAISPNGNGLILIDRSS---------ANT 152 (331)
T ss_dssp ETTTTEEEEE----------E----------------------ECCTTEEEEEECTTSSCEEEEEETT---------TTE
T ss_pred ECCCCCeEEE----------E----------------------ECCCCccceEECCCCCEEEEEecCC---------Cce
Confidence 9987642110 0 1123346899999999777664331 45
Q ss_pred EEEEeccCCCccc---ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCc---eEEE
Q 010051 252 AYIFSRKDLSRPA---LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPP---IAIL 325 (519)
Q Consensus 252 i~i~~~~~~~~~~---~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~---~~~~ 325 (519)
+.+|++....... ............++|+|+|+++ ++++..++.|++||+.+++. +..+
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l---------------~v~~~~~~~v~v~d~~~~~~~~~~~~~ 217 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA---------------FVANLIGNSIGILETQNPENITLLNAV 217 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE---------------EEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE---------------EEEeCCCCeEEEEECCCCcccceeeec
Confidence 8888876433211 1111234557899999998432 34455678999999999988 7777
Q ss_pred eccccccEEEEEEcCCCCEEEEEe-CCCcEEEEEecCCcccceeeecCCc---ccccCCCCcccccCCccEEEeec-CCc
Q 010051 326 AGLHYAAITDIAWSNNARYLALSS-QDGYCTLVEFENDELGIPISLSGNK---VSKDENKSPLVTKSEDMIIEAST-NDK 400 (519)
Q Consensus 326 ~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~l~~~~-~d~ 400 (519)
.. ...+..++|+|+|++|++++ .++.|.+||+.+++........... .........++|+|||.+|++++ .++
T Consensus 218 ~~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 295 (331)
T 3u4y_A 218 GT--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISR 295 (331)
T ss_dssp EC--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTT
T ss_pred cC--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCC
Confidence 64 46678999999999877665 4688999999887653222222220 01112235689999999876554 444
Q ss_pred ee-eecCCCCC
Q 010051 401 LV-TAETKEPD 410 (519)
Q Consensus 401 ~i-~~~~~~~~ 410 (519)
.+ +|+...+.
T Consensus 296 ~v~v~d~~~~~ 306 (331)
T 3u4y_A 296 ELKVFTISGKV 306 (331)
T ss_dssp EEEEEETTSCE
T ss_pred cEEEEEecCCc
Confidence 44 77765543
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=5.7e-24 Score=224.24 Aligned_cols=352 Identities=11% Similarity=0.062 Sum_probs=233.5
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCcccccccccc--ccccccccCcceeEEEEc-cCC---
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTAS--YQNSLSYHGSAINILRFS-PCG--- 76 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~-~~~--- 76 (519)
++..+.+.+|. .+.+++|||||++||++. ++.|++|++..... ..+.... .......|...+..++|+ |++
T Consensus 235 g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~l 311 (1045)
T 1k32_A 235 GKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLI 311 (1045)
T ss_dssp SCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCE
T ss_pred CCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEE
Confidence 34445555554 467889999999999884 88999999843332 2221100 001112255678999999 885
Q ss_pred -----CeEEEEEcccCCCcccceeeeccccCCC-CeEEEEEcCCCCEEEEEeCCCeEE-EEEcCCCceEEEecccccCeE
Q 010051 77 -----GELIIWKLHTTETGQAWKVLKNLSFHRK-DVLDLQWSTDGAFLLSGSVDNSCI-IWDVNKGSVLQILDAHFHYVQ 149 (519)
Q Consensus 77 -----~~i~vw~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~-vwd~~~~~~~~~~~~h~~~v~ 149 (519)
+.|.+|++..+ . ...+..|.. .+..++|+ ||+.|++++.++.++ +||+.+++... +..|...+.
T Consensus 312 a~~~~~~i~~~~~~~~------~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~ 382 (1045)
T 1k32_A 312 AFVSRGQAFIQDVSGT------Y-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVF 382 (1045)
T ss_dssp EEEETTEEEEECTTSS------B-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEE
T ss_pred EEEEcCEEEEEcCCCC------c-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCcccee
Confidence 56777877654 2 233556777 89999999 999999999888999 99998776544 447888999
Q ss_pred EEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 150 GVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 150 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
.++|+|+|++|++++.++.|++||+.+++..... ..+...+..++|+||
T Consensus 383 ~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~-------------------------------~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE-------------------------------RSREAMITDFTISDN 431 (1045)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-------------------------------ECSSSCCCCEEECTT
T ss_pred eeEECCCCCEEEEECCCCeEEEEECCCCceEEec-------------------------------cCCCCCccceEECCC
Confidence 9999999999999999999999999876521110 123456778999999
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceE--EEEEec
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRL--IFAIAT 307 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~--~~~~~~ 307 (519)
|++|++++.+............+++||+.... ...+..|...+..++|+|+|+.|+..+..+....+... -+....
T Consensus 432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~ 509 (1045)
T 1k32_A 432 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV 509 (1045)
T ss_dssp SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCS
T ss_pred CCeEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccccccc
Confidence 99998875431000000122589999997543 56677788889999999999877665554322111000 000000
Q ss_pred CCeEE------------------------EEeCCCC-CceEEEeccccccEEEEEEcCCCCEEEE-------------Ee
Q 010051 308 LNSLY------------------------IYDTESV-PPIAILAGLHYAAITDIAWSNNARYLAL-------------SS 349 (519)
Q Consensus 308 d~~i~------------------------vwd~~~~-~~~~~~~~~~~~~i~~~~~s~~g~~l~~-------------~~ 349 (519)
+..+. .|++... ..+..+.. |.+.+..++++|||+++++ ..
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~-~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~ 588 (1045)
T 1k32_A 510 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV-DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 588 (1045)
T ss_dssp CBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSC-CCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCC
T ss_pred CceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCC-CCCChhheEEcCCCeEEEEecccCcccccccccC
Confidence 11111 1333221 12334444 6778999999999987875 12
Q ss_pred CCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeecCCCCC
Q 010051 350 QDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETKEPD 410 (519)
Q Consensus 350 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~~~~ 410 (519)
....|.+||+.+++..... ..+..++|||||++|++++.+...+|+...+.
T Consensus 589 ~~~~l~~~d~~~~~~~~l~----------~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 589 EKGVLLKYDVKTRKVTEVK----------NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp CCEEEEEEETTTCCEEEEE----------EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred CCceEEEEECCCCcEEEee----------cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 2456778888776532111 24567899999999999998888888875543
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=5.3e-23 Score=190.50 Aligned_cols=270 Identities=11% Similarity=0.052 Sum_probs=195.3
Q ss_pred CCCCCEEEEEEecCCCEEEEEcC-------CCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------
Q 010051 11 HDTKPVLTLDFHPISGLLATGGA-------DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------- 75 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------- 75 (519)
.....+..++|+|++++|++++. ++.|.+||..+++....+... ..+..++|+|+
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~v~~ 107 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND----------LKPFGATINNTTQTLWFGN 107 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES----------SCCCSEEEETTTTEEEEEE
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC----------CCcceEEECCCCCEEEEEe
Confidence 34467899999999998887764 568999999998877665432 22344455554
Q ss_pred --CCeEEEEEcccCCCcccceeeeccccCCC---------CeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCceEEEec
Q 010051 76 --GGELIIWKLHTTETGQAWKVLKNLSFHRK---------DVLDLQWSTDGAFLLSGS--VDNSCIIWDVNKGSVLQILD 142 (519)
Q Consensus 76 --~~~i~vw~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~ 142 (519)
++.|.+||+.++ +....+..+.. .+.+++|+|+|++|++++ .++.|.+||+.+++.+..+.
T Consensus 108 ~~~~~v~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 108 TVNSAVTAIDAKTG------EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp TTTTEEEEEETTTC------CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred cCCCEEEEEeCCCC------eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 478889998876 33344433322 278999999999888776 47899999999999888887
Q ss_pred ccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceee
Q 010051 143 AHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFR 222 (519)
Q Consensus 143 ~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (519)
.+...+.+++|+|++++|++++.++.|.+||+.+++....... ........+.
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~---------------------------~~~~~~~~~~ 234 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL---------------------------LDDGKEHFFI 234 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC---------------------------CCSSSCCCEE
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc---------------------------CCCCCCcccc
Confidence 5666688999999999999999999999999987642111100 0011234567
Q ss_pred EEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEE
Q 010051 223 RLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLI 302 (519)
Q Consensus 223 ~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~ 302 (519)
.++|+|+|++++++.... +.+++||..+... ...+.... ...++|+|++.. .+
T Consensus 235 ~~~~s~dg~~l~~~~~~~---------~~v~~~d~~~~~~-~~~~~~~~--~~~~~~s~dg~~---------------l~ 287 (353)
T 3vgz_A 235 NISLDTARQRAFITDSKA---------AEVLVVDTRNGNI-LAKVAAPE--SLAVLFNPARNE---------------AY 287 (353)
T ss_dssp EEEEETTTTEEEEEESSS---------SEEEEEETTTCCE-EEEEECSS--CCCEEEETTTTE---------------EE
T ss_pred eEEECCCCCEEEEEeCCC---------CEEEEEECCCCcE-EEEEEcCC--CceEEECCCCCE---------------EE
Confidence 899999999888765432 6899999865432 22222221 246899999843 23
Q ss_pred EEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCC
Q 010051 303 FAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDG 352 (519)
Q Consensus 303 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg 352 (519)
++...++.|.+||+.+++.+..+.. ...+.+++|+|+|++|+++..++
T Consensus 288 v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 288 VTHRQAGKVSVIDAKSYKVVKTFDT--PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEEC--CSEEEEEEECTTSCEEEEEEECC
T ss_pred EEECCCCeEEEEECCCCeEEEEEec--CCCCCeEEEcCCCCEEEEEEccc
Confidence 4444678999999999998888775 45789999999999887776654
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2.2e-23 Score=211.55 Aligned_cols=278 Identities=14% Similarity=0.135 Sum_probs=192.8
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC--------CeEEEEEcc
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG--------GELIIWKLH 85 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~i~vw~~~ 85 (519)
..|.+++|||| +.++.+. ++.|++||+.+++... +..+...+..++|+|++ +.|++|++.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~----------l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY----------LFDTNEETASLDFSPVGDRVAYVRNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE----------EECCTTCCTTCEECTTSSEEEEEETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE----------ccCCcccccCCcCCCCCCEEEEEECCeEEEEecC
Confidence 57999999999 6666553 5999999998876533 22345556777788874 778999998
Q ss_pred c-----CCCcccceeeeccccCCC--------------CeEEEEEcCCCCEEEEEe------------------------
Q 010051 86 T-----TETGQAWKVLKNLSFHRK--------------DVLDLQWSTDGAFLLSGS------------------------ 122 (519)
Q Consensus 86 ~-----~~~~~~~~~~~~~~~~~~--------------~v~~~~~s~~~~~l~~~~------------------------ 122 (519)
+ +. .......+.. .+.+++|||||++|++++
T Consensus 150 ~~~~~~g~------~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 150 KLGEGMSR------AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp CTTSCCCC------CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cccccCCC------cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 7 52 2222222222 258899999999999987
Q ss_pred ---------CCCeEEEEEcCCCceEEEec--ccccCeEEEEEcCCCCeEEEeeCCC-----eEEEEecCCCCcccccccc
Q 010051 123 ---------VDNSCIIWDVNKGSVLQILD--AHFHYVQGVAWDPLSKYVASLSSDR-----TCRIYANRPTKSKGVEKMN 186 (519)
Q Consensus 123 ---------~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~ 186 (519)
.+..|++||+.+++...... .|...+.+++|+|++++|++++.++ .|.+||+.+++...
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~----- 298 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR----- 298 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE-----
T ss_pred eCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee-----
Confidence 44689999999887655442 4667899999999999999887775 89999998762100
Q ss_pred ceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc--CCCeEEEecCCcceeeeecccceEEEEeccCCCccc
Q 010051 187 YVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP--DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA 264 (519)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp--~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 264 (519)
..... ........+..++|+| +|++++++..+ +.+.+|.+.......
T Consensus 299 ----~~~~~-----------------~~~~~~~~~~~~~~sp~~dg~~l~~~~~~----------g~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 299 ----TLFVE-----------------TDKHYVEPLHPLTFLPGSNNQFIWQSRRD----------GWNHLYLYDTTGRLI 347 (706)
T ss_dssp ----EEEEE-----------------ECSSCCCCCSCCEECTTCSSEEEEEECTT----------SSCEEEEEETTSCEE
T ss_pred ----EEEEc-----------------cCCCeECccCCceeecCCCCEEEEEEccC----------CccEEEEEECCCCEE
Confidence 00000 0000011235789999 99988876655 455666654334455
Q ss_pred ccCCCCCCCeEE-EEEcCCcccccccCCCCcccccceEEEEEecCC----eEEEEeCCCCCceEEEeccccccEEEEEEc
Q 010051 265 LQLPGASKPVVA-VRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN----SLYIYDTESVPPIAILAGLHYAAITDIAWS 339 (519)
Q Consensus 265 ~~~~~~~~~v~~-~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s 339 (519)
..+..+...+.. ++|+|++..+ ++++..++ .|+.||+.+++. ..+. |...+.+++||
T Consensus 348 ~~l~~~~~~v~~~~~~spdg~~l---------------~~~~~~~~~~~~~l~~~d~~~~~~-~~l~--~~~~~~~~~~s 409 (706)
T 2z3z_A 348 RQVTKGEWEVTNFAGFDPKGTRL---------------YFESTEASPLERHFYCIDIKGGKT-KDLT--PESGMHRTQLS 409 (706)
T ss_dssp EECCCSSSCEEEEEEECTTSSEE---------------EEEESSSCTTCBEEEEEETTCCCC-EESC--CSSSEEEEEEC
T ss_pred EecCCCCeEEEeeeEEcCCCCEE---------------EEEecCCCCceEEEEEEEcCCCCc-eecc--CCCceEEEEEC
Confidence 666777777876 7999998543 33333444 788888887763 3333 56779999999
Q ss_pred CCCCEEEEEeCC----CcEEEEEecCCc
Q 010051 340 NNARYLALSSQD----GYCTLVEFENDE 363 (519)
Q Consensus 340 ~~g~~l~~~~~d----g~i~vwd~~~~~ 363 (519)
|||++|+..+.+ +.|++||+.+++
T Consensus 410 pdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 410 PDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 999998876544 469999998775
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.4e-23 Score=189.23 Aligned_cols=243 Identities=12% Similarity=0.072 Sum_probs=175.1
Q ss_pred CCeeEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecC-CccccccccccccccccccCcceeEEEEccCCCeEEE
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINS-GEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELII 81 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~v 81 (519)
++....+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++....
T Consensus 31 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~------------------------------- 78 (297)
T 2ojh_A 31 TRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKV------------------------------- 78 (297)
T ss_dssp TTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEEC-------------------------------
T ss_pred CCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEe-------------------------------
Confidence 455666677889999999999999999986 78899999887 543211
Q ss_pred EEcccCCCcccceeeecccc-CCCCeEEEEEcCCCCEEEEEeC--C--CeEEEEEcCCCceEEEecccccCeEEEEEcCC
Q 010051 82 WKLHTTETGQAWKVLKNLSF-HRKDVLDLQWSTDGAFLLSGSV--D--NSCIIWDVNKGSVLQILDAHFHYVQGVAWDPL 156 (519)
Q Consensus 82 w~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~--d--g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 156 (519)
... +...+.+++|+|+|++|++++. + ..|++|++.++. ...+..+ ..+..++|+|+
T Consensus 79 -----------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spd 139 (297)
T 2ojh_A 79 -----------------DTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPD 139 (297)
T ss_dssp -----------------CCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTT
T ss_pred -----------------ccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCC
Confidence 111 2356788999999999999983 3 455555555555 3444444 34889999999
Q ss_pred CCeEE-EeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEE
Q 010051 157 SKYVA-SLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLV 235 (519)
Q Consensus 157 ~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~ 235 (519)
+++|+ +++.++.+++|++...... ......+...+.+++|+|+|+++++
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDSGV------------------------------ETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTCC------------------------------EEECCCSSSCEEEEEECTTSSEEEE
T ss_pred CCEEEEEECCCCceEEEEEECCCCc------------------------------ceEcccCCCccccceECCCCCEEEE
Confidence 99887 7788999999986532110 0111233456789999999999887
Q ss_pred ecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecC-------
Q 010051 236 PAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL------- 308 (519)
Q Consensus 236 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d------- 308 (519)
++... +.+.+|++.........+..+...+..+.|+|++.+ +++++.+
T Consensus 190 ~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----------------l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 190 NSSRT---------GQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDK----------------VVFVSYDADVFDHP 244 (297)
T ss_dssp EECTT---------SSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSE----------------EEEEEEETTCCSCC
T ss_pred EecCC---------CCccEEEECCCCCCcEEEecCCcccCCeEECCCCCE----------------EEEEEcCCCCCccc
Confidence 66421 467777775444556667778888999999999955 4444333
Q ss_pred ----CeEEEEeCCCCCceEE--EeccccccEEEEEEcCCCCEEEEEeCCC
Q 010051 309 ----NSLYIYDTESVPPIAI--LAGLHYAAITDIAWSNNARYLALSSQDG 352 (519)
Q Consensus 309 ----~~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~s~~g~~l~~~~~dg 352 (519)
+.|++||+.+++.... +.+ |...+.+++|+|+|++|++++.+.
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFG-GQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEE-STTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccCceEEEEEecCCCCceeeeccCC-CCcccccceECCCCCEEEEEEecc
Confidence 5799999998876443 335 788899999999999999887664
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.2e-23 Score=193.49 Aligned_cols=277 Identities=13% Similarity=0.050 Sum_probs=193.3
Q ss_pred CEEEEEcCCCcEEEEEecCCccccccccccccccccccCc-ceeEEEEccC----------CCeEEEEEcccCCCcccce
Q 010051 26 GLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGS-AINILRFSPC----------GGELIIWKLHTTETGQAWK 94 (519)
Q Consensus 26 ~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~----------~~~i~vw~~~~~~~~~~~~ 94 (519)
++|++++.++.|++||..+++....+.... .. .+..++|+|+ ++.|.+||+.++ +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~------~ 67 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIAD--------AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG------E 67 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTT--------CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC------C
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCC--------CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC------C
Confidence 478899999999999999988766553221 11 2445556555 478889998776 3
Q ss_pred eeecccc-C----CCCeEEEEEcCCCCEEEEEe------------CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCC
Q 010051 95 VLKNLSF-H----RKDVLDLQWSTDGAFLLSGS------------VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLS 157 (519)
Q Consensus 95 ~~~~~~~-~----~~~v~~~~~s~~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 157 (519)
.+..+.. + ...+.+++|+|+|++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg 146 (337)
T 1pby_B 68 TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDG 146 (337)
T ss_dssp EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTS
T ss_pred eEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCC
Confidence 3333321 1 22567899999999999886 579999999999888777764 3567889999999
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
++|+++ ++.|.+||+.+++.... +. .... ...+.|+|+|+++++..
T Consensus 147 ~~l~~~--~~~i~~~d~~~~~~~~~----------~~-------------------~~~~---~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 147 SKLYGL--GRDLHVMDPEAGTLVED----------KP-------------------IQSW---EAETYAQPDVLAVWNQH 192 (337)
T ss_dssp SCEEEE--SSSEEEEETTTTEEEEE----------EC-------------------STTT---TTTTBCCCBCCCCCCCC
T ss_pred CEEEEe--CCeEEEEECCCCcEeee----------ee-------------------cccc---CCCceeCCCccEEeeec
Confidence 988887 68999999987642110 00 0000 01236788888776655
Q ss_pred CCcceee----eec----------ccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEE
Q 010051 238 GSYKISS----MSE----------SINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIF 303 (519)
Q Consensus 238 ~~~~~~~----~~~----------~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~ 303 (519)
....... ... ....+++||..........+..+...+..++|+|++. +++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~----------------~l~ 256 (337)
T 1pby_B 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT----------------RAF 256 (337)
T ss_dssp TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSS----------------EEE
T ss_pred cCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCC----------------EEE
Confidence 4332110 000 0115788998765433333444556788999999984 445
Q ss_pred EEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeec
Q 010051 304 AIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLS 371 (519)
Q Consensus 304 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 371 (519)
++ ++.|++||+.+++.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.+++....+...
T Consensus 257 ~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 257 GA--YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred Ee--CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 44 68999999999988877764 356789999999999999999999999999988765555443
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=4.6e-23 Score=190.08 Aligned_cols=252 Identities=10% Similarity=0.113 Sum_probs=172.3
Q ss_pred ecCCCCCEEEEEEecCCCEEEEEcCC-CcEEEEEec--CCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 9 NWHDTKPVLTLDFHPISGLLATGGAD-YDIKIWLIN--SGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 9 ~~~h~~~V~~~~~sp~~~~la~~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
...|...+.+++|+|+|++|++++.+ +.|.+|++. +++.
T Consensus 33 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-------------------------------------- 74 (343)
T 1ri6_A 33 VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-------------------------------------- 74 (343)
T ss_dssp EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE--------------------------------------
T ss_pred eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce--------------------------------------
Confidence 35677889999999999988888776 899999987 3321
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEcC---CCceEEEecccccCeEEEEEcCCCCeEE
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSV-DNSCIIWDVN---KGSVLQILDAHFHYVQGVAWDPLSKYVA 161 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 161 (519)
..+..+..+. .+..++|+|+|++|++++. ++.|.+||+. +++.+..+..+ ..+.+++|+|++++|+
T Consensus 75 --------~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~ 144 (343)
T 1ri6_A 75 --------TFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLW 144 (343)
T ss_dssp --------EEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEE
T ss_pred --------eeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEE
Confidence 1111112122 6788999999998877765 8899999994 33445555544 4588999999999888
Q ss_pred Eee-CCCeEEEEecCC-CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCC
Q 010051 162 SLS-SDRTCRIYANRP-TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGS 239 (519)
Q Consensus 162 ~~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~ 239 (519)
+++ .++.|.+||+.. ++..... ... . .......+..++|+|+|++++++...
T Consensus 145 ~~~~~~~~v~~~d~~~~~~~~~~~------~~~-------------------~-~~~~~~~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 145 VPALKQDRICLFTVSDDGHLVAQD------PAE-------------------V-TTVEGAGPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEE------EEE-------------------E-ECSTTCCEEEEEECTTSSEEEEEETT
T ss_pred EecCCCCEEEEEEecCCCceeeec------ccc-------------------c-ccCCCCCcceEEECCCCCEEEEEeCC
Confidence 877 899999999976 3211000 000 0 00112356689999999988766532
Q ss_pred cceeeeecccceEEEEeccCCCcc------cccCCC---CCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCe
Q 010051 240 YKISSMSESINSAYIFSRKDLSRP------ALQLPG---ASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNS 310 (519)
Q Consensus 240 ~~~~~~~~~~~~i~i~~~~~~~~~------~~~~~~---~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~ 310 (519)
. +.+.+|++...... ...+.. ....+..++|+|+++++ +++...++.
T Consensus 199 ~---------~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l---------------~v~~~~~~~ 254 (343)
T 1ri6_A 199 N---------SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL---------------YACDRTASL 254 (343)
T ss_dssp T---------TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE---------------EEEETTTTE
T ss_pred C---------CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE---------------EEEecCCCE
Confidence 1 68999998532111 111221 13456789999998432 334556889
Q ss_pred EEEEeCC--CC--CceEEEeccccccEEEEEEcCCCCEEEEEe-CCCcEEEEEec
Q 010051 311 LYIYDTE--SV--PPIAILAGLHYAAITDIAWSNNARYLALSS-QDGYCTLVEFE 360 (519)
Q Consensus 311 i~vwd~~--~~--~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~vwd~~ 360 (519)
|.+|++. ++ +.+..+.. +. .+.+++|+|+|++|++++ .++.|.+|+++
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPT-ET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEEC-SS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEEEEcCCCCceEEeeeecC-CC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9999998 33 34444444 33 388999999999988887 57999999776
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=4e-23 Score=210.91 Aligned_cols=275 Identities=12% Similarity=0.089 Sum_probs=193.3
Q ss_pred CEEEEEEecCCCEEEEEcCCCcEEEEEecCC---ccccccccccccccccccCcceeEEEEccCC--------CeEEEEE
Q 010051 15 PVLTLDFHPISGLLATGGADYDIKIWLINSG---EKQKKIPTASYQNSLSYHGSAINILRFSPCG--------GELIIWK 83 (519)
Q Consensus 15 ~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~i~vw~ 83 (519)
.|.+++|||||++|++++. +.|++||+.++ ... .+..|...+..++|+|++ +.|++||
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~----------~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d 178 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR----------QLTHGEGFATDAKLSPKGGFVSFIRGRNLWVID 178 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC----------BCCCSSSCEEEEEECTTSSEEEEEETTEEEEEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE----------EcccCCcccccccCCCCCCEEEEEeCCcEEEEe
Confidence 3889999999999999886 89999999987 322 245577889999999996 4688899
Q ss_pred cccCCCcccceeeeccccCCCC----------------eEEEEEcCCCCEEEEEeCCC----------------------
Q 010051 84 LHTTETGQAWKVLKNLSFHRKD----------------VLDLQWSTDGAFLLSGSVDN---------------------- 125 (519)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~----------------v~~~~~s~~~~~l~~~~~dg---------------------- 125 (519)
+.++ +.......+... +..++|||||++|++++.|+
T Consensus 179 ~~~g------~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 179 LASG------RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp TTTT------EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred cCCC------CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 8765 233322223222 47899999999999988765
Q ss_pred -----------eEEEEEcCC-CceEEEec--ccccCeEEEEEcCCCCeEEEeeC-----CCeEEEEecCCCCcccccccc
Q 010051 126 -----------SCIIWDVNK-GSVLQILD--AHFHYVQGVAWDPLSKYVASLSS-----DRTCRIYANRPTKSKGVEKMN 186 (519)
Q Consensus 126 -----------~i~vwd~~~-~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~ 186 (519)
.|++||+.+ ++...... .|...+..++| |||++|++++. +..|.+||+.+++....
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~---- 327 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL---- 327 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE----
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE----
Confidence 899999988 87655443 47788999999 99999987654 56899999987652211
Q ss_pred ceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCccccc
Q 010051 187 YVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQ 266 (519)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 266 (519)
+... ....-..+..++|+|||++++++..+ +.+.+|.+..... ...
T Consensus 328 ------~~~~-----------------~~~~~~~~~~~~~spdg~~~~~~~~~----------g~~~l~~~~~~~~-~~~ 373 (741)
T 2ecf_A 328 ------AHET-----------------SPTWVPLHNSLRFLDDGSILWSSERT----------GFQHLYRIDSKGK-AAA 373 (741)
T ss_dssp ------EEEE-----------------CSSCCCCCSCCEECTTSCEEEEECTT----------SSCEEEEECSSSC-EEE
T ss_pred ------EEcC-----------------CCCcCCcCCceEECCCCeEEEEecCC----------CccEEEEEcCCCC-eee
Confidence 1000 00000124578999999977776554 3444554432233 666
Q ss_pred CCCCCCCeEEE-EEcCCcccccccCCCCcccccceEEEEEecCC--eEEEEeCCC-CCceEEEeccccccEEEEEEcCCC
Q 010051 267 LPGASKPVVAV-RFCPLAFNLRESNSAGFFKLPYRLIFAIATLN--SLYIYDTES-VPPIAILAGLHYAAITDIAWSNNA 342 (519)
Q Consensus 267 ~~~~~~~v~~~-~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~--~i~vwd~~~-~~~~~~~~~~~~~~i~~~~~s~~g 342 (519)
+..+...+..+ .|+|+++.+ ++++..++ .+++|++.. +.....+.. ...+..++|||||
T Consensus 374 l~~~~~~v~~~~~~s~dg~~l---------------~~~~~~~~~~~~~l~~~~~~g~~~~~l~~--~~~~~~~~~spdg 436 (741)
T 2ecf_A 374 LTHGNWSVDELLAVDEKAGLA---------------YFRAGIESARESQIYAVPLQGGQPQRLSK--APGMHSASFARNA 436 (741)
T ss_dssp SCCSSSCEEEEEEEETTTTEE---------------EEEECSSCTTCBEEEEEETTCCCCEECCC--SCSEEEEEECTTS
T ss_pred eeecceEEEeEeEEeCCCCEE---------------EEEEeCCCCceEEEEEEEcCCCCeeeccc--CCCceEEEECCCC
Confidence 77777888887 599998543 34444444 788998764 555555554 5568899999999
Q ss_pred CEEEEEeCC----CcEEEEEecCC
Q 010051 343 RYLALSSQD----GYCTLVEFEND 362 (519)
Q Consensus 343 ~~l~~~~~d----g~i~vwd~~~~ 362 (519)
++|+....+ +.+.+|+....
T Consensus 437 ~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 437 SVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp SEEEEEEEETTEEEEEEEEETTSC
T ss_pred CEEEEEecCCCCCCeEEEEEcCCC
Confidence 998876544 46888887544
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=1.1e-21 Score=180.77 Aligned_cols=244 Identities=13% Similarity=0.036 Sum_probs=162.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC-CeEEEEEcC--CCce--EEEecccccCeEEEEEcCCCCeEEEeeC-CCeEEEEecC
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVD-NSCIIWDVN--KGSV--LQILDAHFHYVQGVAWDPLSKYVASLSS-DRTCRIYANR 175 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~--~~~~--~~~~~~h~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 175 (519)
+...+.+++|+|+|++|++++.+ +.|.+|++. ++.. +..+..+. .+..++|+|++++|++++. ++.|.+||+.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 55678889999999999988886 999999997 5543 34444443 7889999999998877665 8899999985
Q ss_pred CCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec-CCcceeeeecccceEEE
Q 010051 176 PTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA-GSYKISSMSESINSAYI 254 (519)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~-~~~~~~~~~~~~~~i~i 254 (519)
.+... ..... ......+..++|+|+|++++++. .+ +.+++
T Consensus 115 ~~~~~-------~~~~~----------------------~~~~~~~~~~~~s~dg~~l~~~~~~~----------~~v~~ 155 (343)
T 1ri6_A 115 DGLPV-------GVVDV----------------------VEGLDGCHSANISPDNRTLWVPALKQ----------DRICL 155 (343)
T ss_dssp TTEEE-------EEEEE----------------------ECCCTTBCCCEECTTSSEEEEEEGGG----------TEEEE
T ss_pred CCccc-------ccccc----------------------ccCCCCceEEEECCCCCEEEEecCCC----------CEEEE
Confidence 22100 00000 01123467899999999888875 33 68999
Q ss_pred EeccCCCccc-----ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCC--CCc--eEEE
Q 010051 255 FSRKDLSRPA-----LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTES--VPP--IAIL 325 (519)
Q Consensus 255 ~~~~~~~~~~-----~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~--~~~--~~~~ 325 (519)
|++....... .........+..++|+|++.++ ++++..++.|.+|++.. ++. ...+
T Consensus 156 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l---------------~~~~~~~~~i~~~~~~~~~g~~~~~~~~ 220 (343)
T 1ri6_A 156 FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA---------------YCVNELNSSVDVWELKDPHGNIECVQTL 220 (343)
T ss_dssp EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE---------------EEEETTTTEEEEEESSCTTSCCEEEEEE
T ss_pred EEecCCCceeeecccccccCCCCCcceEEECCCCCEE---------------EEEeCCCCEEEEEEecCCCCcEEEEeec
Confidence 9987523221 1112233578889999998432 34444778999999953 433 2222
Q ss_pred ec---cc--cccEEEEEEcCCCCEEEEE-eCCCcEEEEEecC--CcccceeeecCCcccccCCCCcccccCCccEEEeec
Q 010051 326 AG---LH--YAAITDIAWSNNARYLALS-SQDGYCTLVEFEN--DELGIPISLSGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 326 ~~---~~--~~~i~~~~~s~~g~~l~~~-~~dg~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
.. .+ ...+..++|+|+|++|+++ ..++.|.+|++.. +.......+.. ...+..++|+|+|.+|++++
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT-----ETQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-----SSSCCCEEECTTSSEEEEEC
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC-----CCccceEEECCCCCEEEEec
Confidence 21 01 2356789999999988754 4789999999983 32222222221 12378899999999887776
Q ss_pred -CCcee-eec
Q 010051 398 -NDKLV-TAE 405 (519)
Q Consensus 398 -~d~~i-~~~ 405 (519)
.++.+ +|.
T Consensus 296 ~~~~~v~v~~ 305 (343)
T 1ri6_A 296 QKSHHISVYE 305 (343)
T ss_dssp TTTCEEEEEE
T ss_pred CCCCeEEEEE
Confidence 44444 664
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=2.9e-22 Score=184.91 Aligned_cols=251 Identities=11% Similarity=0.098 Sum_probs=164.0
Q ss_pred cCCCCCEEEEEEecCCCEEEEEcC---CCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 10 WHDTKPVLTLDFHPISGLLATGGA---DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 10 ~~h~~~V~~~~~sp~~~~la~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
..+...+..++|+|||+ |++++. ++.|++|++.++..
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~--------------------------------------- 75 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA--------------------------------------- 75 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE---------------------------------------
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE---------------------------------------
Confidence 34456677788888888 444433 57788888755431
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCC-Cc--eEEEecc---------cccCeEEEEE
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNK-GS--VLQILDA---------HFHYVQGVAW 153 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~-~~--~~~~~~~---------h~~~v~~~~~ 153 (519)
+.+..+..+...+..++|+|||++|++++ .++.|.+|++.. +. .+..+.. +...+.+++|
T Consensus 76 -------~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 148 (347)
T 3hfq_A 76 -------HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL 148 (347)
T ss_dssp -------EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE
T ss_pred -------EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE
Confidence 12222223556678899999999998888 679999999963 32 2222221 1224889999
Q ss_pred cCCCCeEEEeeCCCeEEEEecCC-CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe
Q 010051 154 DPLSKYVASLSSDRTCRIYANRP-TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF 232 (519)
Q Consensus 154 ~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 232 (519)
+|+++++++...++.|.+|++.. ++.... ..+ .......+..++|+|+|++
T Consensus 149 spdg~l~v~~~~~~~v~~~~~~~~g~~~~~--------~~~--------------------~~~~g~~p~~~~~spdg~~ 200 (347)
T 3hfq_A 149 TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ--------SVL--------------------TMEAGFGPRHLVFSPDGQY 200 (347)
T ss_dssp CTTSCEEEEETTTTEEEEEEECTTSCEEEE--------EEE--------------------ECCTTCCEEEEEECTTSSE
T ss_pred CCCCcEEEEeCCCCEEEEEEECCCCcEEEe--------eeE--------------------EcCCCCCCceEEECCCCCE
Confidence 99999666666788999999983 321100 000 0011224567999999998
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcc---cccCCCC------CCCeEEEEEcCCcccccccCCCCcccccceEEE
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRP---ALQLPGA------SKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIF 303 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~---~~~~~~~------~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~ 303 (519)
++++.... +.+.+|++...... ...+... ...+..++|+|+|+++ ++
T Consensus 201 l~v~~~~~---------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l---------------~v 256 (347)
T 3hfq_A 201 AFLAGELS---------SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFL---------------YV 256 (347)
T ss_dssp EEEEETTT---------TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEE---------------EE
T ss_pred EEEEeCCC---------CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEE---------------EE
Confidence 87754332 57888887641111 1111111 1458889999999432 34
Q ss_pred EEecCCeEEEEeCCCC---CceEEEeccccccEEEEEEcCCCCEEEEEeCC-CcEEEEEec
Q 010051 304 AIATLNSLYIYDTESV---PPIAILAGLHYAAITDIAWSNNARYLALSSQD-GYCTLVEFE 360 (519)
Q Consensus 304 ~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d-g~i~vwd~~ 360 (519)
+...++.|.+|++... +.+..+.. +...+..++|+|||++|++++.+ +.|.+|+++
T Consensus 257 ~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 257 SNRGYNTLAVFAVTADGHLTLIQQIST-EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEETTTEEEEEEECGGGCEEEEEEEEC-SSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EeCCCCEEEEEEECCCCcEEEeEEEec-CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 5556789999998732 34445554 55678999999999998888765 899999765
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=9.7e-22 Score=180.21 Aligned_cols=259 Identities=10% Similarity=0.020 Sum_probs=172.0
Q ss_pred eeEEecCCCCCEEEEEEecCCCEEEEEcC-CCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEE
Q 010051 5 TLQINWHDTKPVLTLDFHPISGLLATGGA-DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWK 83 (519)
Q Consensus 5 ~~~~~~~h~~~V~~~~~sp~~~~la~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~ 83 (519)
.+.....+...+ +++|+|+|++|++++. ++.|++||..+++..
T Consensus 32 ~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----------------------------------- 75 (331)
T 3u4y_A 32 ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----------------------------------- 75 (331)
T ss_dssp EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-----------------------------------
T ss_pred eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-----------------------------------
Confidence 333444455666 9999999996665554 788999998876530
Q ss_pred cccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCC---eEEEEEcCCCceEEEecccccCeEEEEEcCCCCeE
Q 010051 84 LHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDN---SCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYV 160 (519)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 160 (519)
...+..+.....+++|+|+|++|+++..++ .|.+||+.+++.+..+..+ ....+++|+|++++|
T Consensus 76 ------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l 142 (331)
T 3u4y_A 76 ------------VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGL 142 (331)
T ss_dssp ------------EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCE
T ss_pred ------------EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEE
Confidence 111111333444489999999999655553 8999999999988877654 456899999999866
Q ss_pred EEe-eCCCe-EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecC
Q 010051 161 ASL-SSDRT-CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAG 238 (519)
Q Consensus 161 ~~~-~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~ 238 (519)
+++ ..++. |.+|++........ . . ... . .....+..++|+|+|++++++..
T Consensus 143 ~~~~~~~~~~i~~~~~~~~g~~~~--~--~-~~~-------------------~---~~~~~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 143 ILIDRSSANTVRRFKIDADGVLFD--T--G-QEF-------------------I---SGGTRPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEE--E--E-EEE-------------------E---CSSSSEEEEEECTTSSEEEEEET
T ss_pred EEEecCCCceEEEEEECCCCcEee--c--C-Ccc-------------------c---cCCCCccceEECCCCCEEEEEeC
Confidence 655 45578 99999985421100 0 0 000 0 12234678999999998776653
Q ss_pred CcceeeeecccceEEEEeccCCCcc--cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeC
Q 010051 239 SYKISSMSESINSAYIFSRKDLSRP--ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDT 316 (519)
Q Consensus 239 ~~~~~~~~~~~~~i~i~~~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~ 316 (519)
.. +.+++||+...... +..+. ....+..++|+|+|+++ +++...++.|.+||+
T Consensus 196 ~~---------~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l---------------~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 196 IG---------NSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTV---------------YVLTESTVDVFNFNQ 250 (331)
T ss_dssp TT---------TEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEE---------------EEECSSEEEEEEEET
T ss_pred CC---------CeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEE---------------EEEEcCCCEEEEEEC
Confidence 32 68999998754320 33333 23567789999999543 233334678999999
Q ss_pred CCCCc--eEEEecc---cc---ccEEEEEEcCCCCEEEEEeC-CCcEEEEEecCCcc
Q 010051 317 ESVPP--IAILAGL---HY---AAITDIAWSNNARYLALSSQ-DGYCTLVEFENDEL 364 (519)
Q Consensus 317 ~~~~~--~~~~~~~---~~---~~i~~~~~s~~g~~l~~~~~-dg~i~vwd~~~~~~ 364 (519)
.+++. +..+... +. .....++|+|+|++|++++. ++.|.+||+.....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 251 LSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp TTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 98876 3333320 11 22356899999998876655 56999999987643
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=2e-22 Score=205.25 Aligned_cols=286 Identities=11% Similarity=0.096 Sum_probs=184.2
Q ss_pred CeeEEecCCCC---CEEEEEEecCCCEEEEEcCC---------CcEEEEEecCCccccccccccccccccccCcceeEEE
Q 010051 4 GTLQINWHDTK---PVLTLDFHPISGLLATGGAD---------YDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILR 71 (519)
Q Consensus 4 ~~~~~~~~h~~---~V~~~~~sp~~~~la~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 71 (519)
....++.+|.. .|.+++|||||++||+++.+ +.|++||+.+++.. .+ .....|...+..++
T Consensus 48 ~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l------~~~~~~~~~~~~~~ 120 (723)
T 1xfd_A 48 TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-SL------DPPEVSNAKLQYAG 120 (723)
T ss_dssp CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-EC------CCTTCCSCCCSBCC
T ss_pred cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE-ec------cCCccccccccccE
Confidence 34455555654 49999999999999998764 78899999988752 11 12234555678888
Q ss_pred EccCC--------CeEEEEEcccCCCcccceeeeccccCCC------------------CeEEEEEcCCCCEEEEEeCCC
Q 010051 72 FSPCG--------GELIIWKLHTTETGQAWKVLKNLSFHRK------------------DVLDLQWSTDGAFLLSGSVDN 125 (519)
Q Consensus 72 ~~~~~--------~~i~vw~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~s~~~~~l~~~~~dg 125 (519)
|+|++ +.|++|++.++. .......+.. .+.+++|||||++|++++.++
T Consensus 121 ~SPdG~~la~~~~~~i~~~~~~~g~------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 121 WGPKGQQLIFIFENNIYYCAHVGKQ------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp BCSSTTCEEEEETTEEEEESSSSSC------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred ECCCCCEEEEEECCeEEEEECCCCc------eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 99986 578889887652 2222222222 237899999999999887553
Q ss_pred ----------------------------------eEEEEEcCCCceEEEeccc------ccCeEEEEEcCCCCeEEEeeC
Q 010051 126 ----------------------------------SCIIWDVNKGSVLQILDAH------FHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 126 ----------------------------------~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~~~~~ 165 (519)
.|++||+.+++....+..+ ...+..++|+|||++|++.+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 274 (723)
T 1xfd_A 195 SRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN 274 (723)
T ss_dssp TTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE
T ss_pred CccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEc
Confidence 7999999988865666554 567899999999998877653
Q ss_pred ----CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCccee----eEEEEccCCCeEEEe-
Q 010051 166 ----DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFF----RRLAWSPDGSFLLVP- 236 (519)
Q Consensus 166 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~sp~g~~l~~~- 236 (519)
+..|.+||+.+++..... .. .+...+ ..++|+|||+.|++.
T Consensus 275 ~~~~~~~i~~~d~~~g~~~~~~----------~~--------------------~~~~~~~~~~~~~~~spdg~~l~~~~ 324 (723)
T 1xfd_A 275 RAQNVSILTLCDATTGVCTKKH----------ED--------------------ESEAWLHRQNEEPVFSKDGRKFFFIR 324 (723)
T ss_dssp TTSCEEEEEEEETTTCCEEEEE----------EE--------------------ECSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred CCCCeEEEEEEeCCCCcceEEE----------Ee--------------------ccCCEEeccCCCceEcCCCCeEEEEE
Confidence 357999999876521110 00 001111 368999999988875
Q ss_pred cCCcceeeeecccceEEEEeccCCCc--ccccCCCCCCCeEE-EEEcCCcccccccCCCCcccccceEEEEEecC--CeE
Q 010051 237 AGSYKISSMSESINSAYIFSRKDLSR--PALQLPGASKPVVA-VRFCPLAFNLRESNSAGFFKLPYRLIFAIATL--NSL 311 (519)
Q Consensus 237 ~~~~~~~~~~~~~~~i~i~~~~~~~~--~~~~~~~~~~~v~~-~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d--~~i 311 (519)
+..... ......+++|+...... ....+..+...+.. ++|+|+|+.| ++++..+ +.+
T Consensus 325 ~~~~~~---~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l---------------~~~~~~~~~~~~ 386 (723)
T 1xfd_A 325 AIPQGG---RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKI---------------YFLSTEDLPRRR 386 (723)
T ss_dssp EECCSS---SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEE---------------EEEESSSCTTCC
T ss_pred ecccCC---CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEE---------------EEEEcCCCCcce
Confidence 322100 00012577777322222 13444443444554 6999999543 2233333 678
Q ss_pred EEEeCCCCC--ceEEEecc--ccccEEEEEEcCCCCEEEEEeC
Q 010051 312 YIYDTESVP--PIAILAGL--HYAAITDIAWSNNARYLALSSQ 350 (519)
Q Consensus 312 ~vwd~~~~~--~~~~~~~~--~~~~i~~~~~s~~g~~l~~~~~ 350 (519)
++|++.... ....+... |...+..++|+|||++|+....
T Consensus 387 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 387 QLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp EEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred EEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 899876432 23333321 4566889999999998887543
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=8.8e-22 Score=181.96 Aligned_cols=296 Identities=11% Similarity=-0.005 Sum_probs=182.3
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC----------CCeEEEEEcccC
Q 010051 18 TLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC----------GGELIIWKLHTT 87 (519)
Q Consensus 18 ~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~i~vw~~~~~ 87 (519)
.+++++++.++++++.++.|++||..+++....+.... ...+..++|+|+ ++.|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--------~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD--------KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSS--------CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC--------CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 46788889999999999999999999988766554221 113445555555 477889998766
Q ss_pred CCcccceeeeccccC------CCCeEEEEEcCCCCEEEEEeCC------------CeEEEEEcCCCce---EEEeccccc
Q 010051 88 ETGQAWKVLKNLSFH------RKDVLDLQWSTDGAFLLSGSVD------------NSCIIWDVNKGSV---LQILDAHFH 146 (519)
Q Consensus 88 ~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~d------------g~i~vwd~~~~~~---~~~~~~h~~ 146 (519)
+....+..+ ...+..++|+|||++|++++.+ +.|.+||+.+++. +..+.. ..
T Consensus 76 ------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~ 148 (349)
T 1jmx_B 76 ------KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PR 148 (349)
T ss_dssp ------EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CS
T ss_pred ------cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CC
Confidence 344333322 2237789999999999998865 8999999988543 333333 34
Q ss_pred CeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCC---cceeeE
Q 010051 147 YVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETL---PSFFRR 223 (519)
Q Consensus 147 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~ 223 (519)
.+.+++|+|+++ +++++ +.|.+||+.+++.......... +.... .......++..... ......
T Consensus 149 ~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 215 (349)
T 1jmx_B 149 QVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNW--------NRKGY--SAPDVLYFWPHQSPRHEFSMLYT 215 (349)
T ss_dssp SCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTC--------CCTTB--CCCBCCCCCCCCCTTCEEEEEEE
T ss_pred cccceeECCCCc-EEEcc--CcEEEEeCCCCceecccccccc--------CCccc--cCccceeeecCCCcceeEEeeee
Confidence 688999999999 65554 3499999987753221111000 00000 00000000100000 012345
Q ss_pred EEEccCCCeEEEecCCc-ceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcC-CcccccccCCCCcccccceE
Q 010051 224 LAWSPDGSFLLVPAGSY-KISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCP-LAFNLRESNSAGFFKLPYRL 301 (519)
Q Consensus 224 ~~~sp~g~~l~~~~~~~-~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~~~~~~~~ 301 (519)
+++++++.......... .+..+....+.+.+++.. .+...+..++|+| ++. +
T Consensus 216 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~sp~dg~----------------~ 269 (349)
T 1jmx_B 216 IARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA----------DLTELYFTGLRSPKDPN----------------Q 269 (349)
T ss_dssp EEEC-------CCCEEEEEEEEEETTTCCEEEEEEE----------ECSSCEEEEEECSSCTT----------------E
T ss_pred eeecCCCcCCccccccceeEEEEeccCCcEEecccc----------cCCCcceeeEecCCCCC----------------E
Confidence 67776653221111000 000112222445555542 2445688999999 984 4
Q ss_pred EEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeec
Q 010051 302 IFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLS 371 (519)
Q Consensus 302 ~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 371 (519)
++++ ++.|.+||+.+++.+..+.. ...+.+++|+|+|++|++++.++.|.+||+.+++....+..+
T Consensus 270 l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 270 IYGV--LNRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEE--cCeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 4544 78999999999988877764 345789999999999998888999999999887665555443
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=6.1e-22 Score=195.97 Aligned_cols=266 Identities=12% Similarity=0.072 Sum_probs=181.4
Q ss_pred CCCCEEEEEEecCCCEEEEEcC-CCcEEEEEecCCccccccccccccccccccC-cceeEEEEccC-----------CCe
Q 010051 12 DTKPVLTLDFHPISGLLATGGA-DYDIKIWLINSGEKQKKIPTASYQNSLSYHG-SAINILRFSPC-----------GGE 78 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~-----------~~~ 78 (519)
+..+|++++|+|||++||+++. ||+++||++.+++..+ +..|. ..+..++|+|+ +..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~----------lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK----------LNREPINSVLDPHYGVGRVILVRDVSKGAEQ 89 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE----------CCSSCCSEECEECTTCSEEEEEEECSTTSCC
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe----------eecccccccccccCCCCeEEEEeccCCCCcc
Confidence 3567999999999999998876 9999999997665433 22233 45666666655 123
Q ss_pred EEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCC
Q 010051 79 LIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAF-LLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLS 157 (519)
Q Consensus 79 i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 157 (519)
..||.+.....+. .. .+. ....+...+|+|||+. +++.+.++.+.+||+.+++.......+ . .+++|+|||
T Consensus 90 ~~l~~~~~~~~g~---~~-~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG 161 (582)
T 3o4h_A 90 HALFKVNTSRPGE---EQ-RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRG 161 (582)
T ss_dssp EEEEEEETTSTTC---CE-ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEET
T ss_pred eEEEEEeccCCCc---cc-ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCC
Confidence 3444443310111 11 222 1223456788888863 333344455669999998766554433 3 789999999
Q ss_pred CeEEEeeCC----CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeE
Q 010051 158 KYVASLSSD----RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFL 233 (519)
Q Consensus 158 ~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l 233 (519)
++|++++.+ +.|++||+.+++... ...+...+..++|||||++|
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~g~~~~--------------------------------l~~~~~~~~~~~~SpDG~~l 209 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSSGGLRV--------------------------------FDSGEGSFSSASISPGMKVT 209 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCCCEE--------------------------------ECCSSCEEEEEEECTTSCEE
T ss_pred CEEEEEEEcCCCCeEEEEEcCCCCCceE--------------------------------eecCCCccccceECCCCCEE
Confidence 999988877 789999998765321 11234567899999999999
Q ss_pred EEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEE--------EcCCcccccccCCCCcccccceEEEEE
Q 010051 234 LVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVR--------FCPLAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~--------~sp~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
+++..++ ...|++||+..... . .+.++...+..+. |+||| .+++++
T Consensus 210 ~~~~~~~--------~~~i~~~d~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~spdg----------------~~~~~~ 263 (582)
T 3o4h_A 210 AGLETAR--------EARLVTVDPRDGSV-E-DLELPSKDFSSYRPTAITWLGYLPDG----------------RLAVVA 263 (582)
T ss_dssp EEEECSS--------CEEEEEECTTTCCE-E-ECCCSCSHHHHHCCSEEEEEEECTTS----------------CEEEEE
T ss_pred EEccCCC--------eeEEEEEcCCCCcE-E-EccCCCcChhhhhhccccceeEcCCC----------------cEEEEE
Confidence 9544431 13799999875433 3 6667777676677 99998 457888
Q ss_pred ecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCc---EEEEEec
Q 010051 306 ATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGY---CTLVEFE 360 (519)
Q Consensus 306 ~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~---i~vwd~~ 360 (519)
+.++.+++|++ ++... . +.+.|.+++|+ +|+++++++.+.. +.+|+..
T Consensus 264 ~~~g~~~l~~~--g~~~~---~-~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 264 RREGRSAVFID--GERVE---A-PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EETTEEEEEET--TEEEC---C-CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred EcCCcEEEEEE--CCeec---c-CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 88999999999 65443 2 45678999999 9999998887754 5555543
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=7.3e-22 Score=200.70 Aligned_cols=313 Identities=12% Similarity=0.070 Sum_probs=195.1
Q ss_pred EEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCc---ceeEEEEccCC-----------------
Q 010051 17 LTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGS---AINILRFSPCG----------------- 76 (519)
Q Consensus 17 ~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~----------------- 76 (519)
.+++|+|||++++++ .|+.|++||+.+++....+. .+.. .+..++|||++
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILS---------NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEEC---------HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEc---------cccccccceeeEEECCCCCeEEEEecCceeEEeec
Confidence 378999999766655 59999999999987654321 1221 37788888874
Q ss_pred -CeEEEEEcccCCCcccceee--eccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEe-cccccCe----
Q 010051 77 -GELIIWKLHTTETGQAWKVL--KNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQIL-DAHFHYV---- 148 (519)
Q Consensus 77 -~~i~vw~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~v---- 148 (519)
+.|++||+.++ +.+ ..+ ...+..++|||||++|+++. ++.|++|++.+++..+.. .++...|
T Consensus 89 ~~~i~~~d~~~g------~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~ 158 (719)
T 1z68_A 89 TATYYIYDLSNG------EFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGI 158 (719)
T ss_dssp EEEEEEEETTTT------EECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESS
T ss_pred ceEEEEEECCCC------ccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccc
Confidence 46778888766 221 222 24688899999999999886 789999999988765533 2332222
Q ss_pred -------------EEEEEcCCCCeEEEeeCC-C---------------------------------eEEEEecCCCCccc
Q 010051 149 -------------QGVAWDPLSKYVASLSSD-R---------------------------------TCRIYANRPTKSKG 181 (519)
Q Consensus 149 -------------~~~~~~~~~~~l~~~~~d-g---------------------------------~i~iwd~~~~~~~~ 181 (519)
.+++|+|||++|++++.| + .|++||+.+++...
T Consensus 159 ~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~ 238 (719)
T 1z68_A 159 PDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVG 238 (719)
T ss_dssp CCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHC
T ss_pred ccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccc
Confidence 489999999999998765 2 44555554432100
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEe----c
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFS----R 257 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~----~ 257 (519)
...+. .......+...+..++|+||++.+++..... .....|++|| .
T Consensus 239 ~~~~~-----------------------~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~------~~~~~l~~~d~~~~~ 289 (719)
T 1z68_A 239 PQEVP-----------------------VPAMIASSDYYFSWLTWVTDERVCLQWLKRV------QNVSVLSICDFREDW 289 (719)
T ss_dssp CEECC-----------------------CCHHHHTSCEEEEEEEESSSSEEEEEEEESS------TTEEEEEEEEECSSS
T ss_pred eeEcc-----------------------CCccCCCCcceEEEeEEeCCCeEEEEEeccc------cCeEEEEEEcccCCC
Confidence 00000 0000113456788999999987666533221 1124688888 5
Q ss_pred cCCCcccccC----CCCCCCeE-----EEEEcCCcccccccCCCCcccccceEEEEEecC--CeEEEEeCCCCCceEEEe
Q 010051 258 KDLSRPALQL----PGASKPVV-----AVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL--NSLYIYDTESVPPIAILA 326 (519)
Q Consensus 258 ~~~~~~~~~~----~~~~~~v~-----~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d--~~i~vwd~~~~~~~~~~~ 326 (519)
.+. .....+ .+|...+. .+.|+|||+.++ +++...+ ..|++||+.+++ ...+.
T Consensus 290 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~--------------~~~~~~~g~~~l~~~~~~~~~-~~~lt 353 (719)
T 1z68_A 290 QTW-DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYY--------------KIFSDKDGYKHIHYIKDTVEN-AIQIT 353 (719)
T ss_dssp SSE-ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEE--------------EEEECTTSCEEEEEESSCSTT-CEECS
T ss_pred CCC-ceEEEEecccccCCceEccccCCccEECCCCCeEE--------------EEEEccCCceEEEEEECCCCc-eEecc
Confidence 443 233333 35666665 789999996542 1122233 368888988776 44555
Q ss_pred ccccccEEEEEEcCCCCEEEEEeCC-----CcEEEEEecCCcc-cceeeecCCcccccCCCCcccccCCccEEEee
Q 010051 327 GLHYAAITDIAWSNNARYLALSSQD-----GYCTLVEFENDEL-GIPISLSGNKVSKDENKSPLVTKSEDMIIEAS 396 (519)
Q Consensus 327 ~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 396 (519)
. +...+..+.++ +++.|+..+.+ +.+.+|.+....- .....+..........+..+.|+||+.+++..
T Consensus 354 ~-~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 354 S-GKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp C-SSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred c-CceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEE
Confidence 4 55668888777 88877766654 8899999875211 11112211000012356678899999887754
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.1e-20 Score=174.95 Aligned_cols=249 Identities=12% Similarity=0.081 Sum_probs=177.3
Q ss_pred CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceEEEecccccC--------
Q 010051 77 GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKGSVLQILDAHFHY-------- 147 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~-------- 147 (519)
+.|.+||+.++ +....+.. ...+..++|+|+|++++.+ ..++.|.+||+.+++.+..+..+...
T Consensus 69 ~~v~~~d~~~~------~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 69 GVVYRLDPVTL------EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEEECTTTC------CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred ccEEEEcCCCC------eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 46777877665 33343332 3447789999999966555 55799999999999988877654322
Q ss_pred -eEEEEEcCCCCeEEEee--CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEE
Q 010051 148 -VQGVAWDPLSKYVASLS--SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRL 224 (519)
Q Consensus 148 -v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (519)
+.+++|+|+++++++++ .++.|.+||+.+++.... + ......+..+
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~----------~---------------------~~~~~~~~~~ 190 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA----------I---------------------QNTGKMSTGL 190 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE----------E---------------------CCCCTTCCCC
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE----------e---------------------cCCCCccceE
Confidence 68899999999887766 478999999987642110 0 0112335689
Q ss_pred EEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCC----CCCCCeEEEEEcCCcccccccCCCCcccccce
Q 010051 225 AWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLP----GASKPVVAVRFCPLAFNLRESNSAGFFKLPYR 300 (519)
Q Consensus 225 ~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~ 300 (519)
+|+|+|++++++..+ +.+.+||..+... ...+. ++...+..++|+|++..+
T Consensus 191 ~~s~dg~~l~~~~~~----------~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l-------------- 245 (353)
T 3vgz_A 191 ALDSEGKRLYTTNAD----------GELITIDTADNKI-LSRKKLLDDGKEHFFINISLDTARQRA-------------- 245 (353)
T ss_dssp EEETTTTEEEEECTT----------SEEEEEETTTTEE-EEEEECCCSSSCCCEEEEEEETTTTEE--------------
T ss_pred EECCCCCEEEEEcCC----------CeEEEEECCCCeE-EEEEEcCCCCCCcccceEEECCCCCEE--------------
Confidence 999999999988765 6888899865432 22221 245568889999998432
Q ss_pred EEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEe-CCCcEEEEEecCCcccceeeecCCcccccC
Q 010051 301 LIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSS-QDGYCTLVEFENDELGIPISLSGNKVSKDE 379 (519)
Q Consensus 301 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 379 (519)
+++...++.|.+||+.+++.+..+.. .. ...++|+|+|++|++++ .++.|.+||+.+++....+.. ..
T Consensus 246 -~~~~~~~~~v~~~d~~~~~~~~~~~~-~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-------~~ 314 (353)
T 3vgz_A 246 -FITDSKAAEVLVVDTRNGNILAKVAA-PE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-------PT 314 (353)
T ss_dssp -EEEESSSSEEEEEETTTCCEEEEEEC-SS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC-------CS
T ss_pred -EEEeCCCCEEEEEECCCCcEEEEEEc-CC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec-------CC
Confidence 33334458999999999998888775 32 25699999999766655 689999999988765544432 12
Q ss_pred CCCcccccCCccEEEeecCC
Q 010051 380 NKSPLVTKSEDMIIEASTND 399 (519)
Q Consensus 380 ~~~~~~~s~~~~~l~~~~~d 399 (519)
....++|+|||.+|+.+..+
T Consensus 315 ~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 315 HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEEECTTSCEEEEEEEC
T ss_pred CCCeEEEcCCCCEEEEEEcc
Confidence 45789999999977666554
No 152
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=3.8e-21 Score=180.45 Aligned_cols=296 Identities=9% Similarity=-0.011 Sum_probs=187.3
Q ss_pred CCCeeEEecCCCCCEEE-----EEEecCCCEEEEEcC-CCc--EEEEEecCCccccccccccccccccccCcceeEEEEc
Q 010051 2 KGGTLQINWHDTKPVLT-----LDFHPISGLLATGGA-DYD--IKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFS 73 (519)
Q Consensus 2 ~~~~~~~~~~h~~~V~~-----~~~sp~~~~la~~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (519)
.++.+..+..|...+.. .+|||||++||.++. ++. |.+||+.+++...
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~------------------------ 74 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ------------------------ 74 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE------------------------
T ss_pred CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE------------------------
Confidence 45667777778777777 899999999998876 663 6666766654321
Q ss_pred cCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEE-
Q 010051 74 PCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVA- 152 (519)
Q Consensus 74 ~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~- 152 (519)
...++...+..++|+|||++|+.++.++.|++||+.+++....+..+...+....
T Consensus 75 ------------------------lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~ 130 (388)
T 3pe7_A 75 ------------------------LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTW 130 (388)
T ss_dssp ------------------------CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEE
T ss_pred ------------------------eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccce
Confidence 1122333344568999999999999999999999999987766666655554444
Q ss_pred -EcCCCCeEEEe----------------------eCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccc
Q 010051 153 -WDPLSKYVASL----------------------SSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKN 209 (519)
Q Consensus 153 -~~~~~~~l~~~----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (519)
+++++++++.. ..+..|.+||+.+++.....
T Consensus 131 ~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-------------------------- 184 (388)
T 3pe7_A 131 VANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-------------------------- 184 (388)
T ss_dssp EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE--------------------------
T ss_pred eECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee--------------------------
Confidence 48999988743 23467888998876421110
Q ss_pred eeeecCCCcceeeEEEEcc-CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCC--CCeEEEEEcCCcccc
Q 010051 210 HLFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGAS--KPVVAVRFCPLAFNL 286 (519)
Q Consensus 210 ~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l 286 (519)
.....+..+.|+| ||+.|+....... ......+++++.... ....+..+. ..+..+.|+|||+.|
T Consensus 185 ------~~~~~~~~~~~sp~dg~~l~~~~~~~~----~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 185 ------QENQWLGHPIYRPYDDSTVAFCHEGPH----DLVDARMWLINEDGT--NMRKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp ------EESSCEEEEEEETTEEEEEEEEECSCT----TTSSCSEEEEETTSC--CCEESCCCCTTEEEEEEEECTTSSCE
T ss_pred ------cCCccccccEECCCCCCEEEEEEecCC----CCCcceEEEEeCCCC--ceEEeeeCCCCcccccceECCCCCEE
Confidence 1123467899999 9999987664310 011247788887533 233343343 357789999999654
Q ss_pred cccCCCCcccccceEEEEEecC----CeEEEEeCCCCCceEEEecc-cccc---EEEEEEcCCCCEEEEE---------e
Q 010051 287 RESNSAGFFKLPYRLIFAIATL----NSLYIYDTESVPPIAILAGL-HYAA---ITDIAWSNNARYLALS---------S 349 (519)
Q Consensus 287 ~~~~~~g~~~~~~~~~~~~~~d----~~i~vwd~~~~~~~~~~~~~-~~~~---i~~~~~s~~g~~l~~~---------~ 349 (519)
+ +....+ ..|++||+.+++........ +... ...+.|+|||+.|+.. .
T Consensus 253 ~---------------~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 253 V---------------YVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp E---------------EEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C
T ss_pred E---------------EEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 3 222221 24999999988754332210 1111 1123799999988754 4
Q ss_pred CCCcEEEEEecCCcccceeeecCCc----ccccCCCCcccccCCccEEEeecC
Q 010051 350 QDGYCTLVEFENDELGIPISLSGNK----VSKDENKSPLVTKSEDMIIEASTN 398 (519)
Q Consensus 350 ~dg~i~vwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~~l~~~~~ 398 (519)
.+..|++||+.+++........... ......+..++|+|||++|++.+.
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 318 NDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp CCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred CCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 4568999999887543221111100 000114678899999998887664
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=1.6e-20 Score=172.52 Aligned_cols=273 Identities=12% Similarity=0.053 Sum_probs=185.2
Q ss_pred EEEccCCCeEEEEEcccCCCcccceeeeccccCC-C-CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEeccc--
Q 010051 70 LRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHR-K-DVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAH-- 144 (519)
Q Consensus 70 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h-- 144 (519)
+.....++.|.+||+.++ +.+..+.... . .+..++|+|+|++++ +++.++.|.+||+.+++.+..+...
T Consensus 4 ~v~~~~~~~v~~~d~~~~------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKM------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEETTTEEEEEETTTT------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred EEEcCCCCeEEEEECCCC------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 344556899999999876 4454444222 1 478899999998765 4556789999999999887766532
Q ss_pred ---ccCeEEEEEcCCCCeEEEee------------CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccc
Q 010051 145 ---FHYVQGVAWDPLSKYVASLS------------SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKN 209 (519)
Q Consensus 145 ---~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (519)
...+..++|+|++++|++++ .++.|.+||+.+++... .+
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~----------~~---------------- 131 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK----------AF---------------- 131 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE----------EE----------------
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE----------EE----------------
Confidence 22577899999999998886 57999999997654210 00
Q ss_pred eeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCC--CCeEEEEEcCCccccc
Q 010051 210 HLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGAS--KPVVAVRFCPLAFNLR 287 (519)
Q Consensus 210 ~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~ 287 (519)
.....+..++|+|+|++++++. +.+++||..... ....+..+. .+ +.|+|++..++
T Consensus 132 ------~~~~~~~~~~~s~dg~~l~~~~------------~~i~~~d~~~~~-~~~~~~~~~~~~~---~~~s~dg~~l~ 189 (337)
T 1pby_B 132 ------EAPRQITMLAWARDGSKLYGLG------------RDLHVMDPEAGT-LVEDKPIQSWEAE---TYAQPDVLAVW 189 (337)
T ss_dssp ------ECCSSCCCEEECTTSSCEEEES------------SSEEEEETTTTE-EEEEECSTTTTTT---TBCCCBCCCCC
T ss_pred ------eCCCCcceeEECCCCCEEEEeC------------CeEEEEECCCCc-EeeeeeccccCCC---ceeCCCccEEe
Confidence 0123356789999999998872 478999986543 222222221 22 37899998776
Q ss_pred ccCCCCcccccceEEEEEecCC----------eEEEEeCCCCCceE-EEeccccccEEEEEEcCCCCEEEEEeCCCcEEE
Q 010051 288 ESNSAGFFKLPYRLIFAIATLN----------SLYIYDTESVPPIA-ILAGLHYAAITDIAWSNNARYLALSSQDGYCTL 356 (519)
Q Consensus 288 ~~~~~g~~~~~~~~~~~~~~d~----------~i~vwd~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~v 356 (519)
.....+... .........++ .|.+||+.+++... .+.. +...+.+++|+|+|++|+++ ++.|.+
T Consensus 190 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~v~~ 264 (337)
T 1pby_B 190 NQHESSGVM--ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI-MDVFYFSTAVNPAKTRAFGA--YNVLES 264 (337)
T ss_dssp CCCTTTTEE--EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE-CSSCEEEEEECTTSSEEEEE--ESEEEE
T ss_pred eeccCCCce--eeeeeccccccccccccccccceEEEeCCCCCceEeecCC-CCCceeeEEECCCCCEEEEe--CCeEEE
Confidence 555433100 00111121222 68999999988752 2233 56678899999999999988 799999
Q ss_pred EEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCC
Q 010051 357 VEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 357 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~ 408 (519)
||+.+++....+.. ...+..++|+|+|.+|++++.++.+ +|+...
T Consensus 265 ~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 265 FDLEKNASIKRVPL-------PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EETTTTEEEEEEEC-------SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred EECCCCcCcceecC-------CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 99988755443332 2356789999999988877766555 665443
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=2.6e-20 Score=189.15 Aligned_cols=348 Identities=13% Similarity=0.089 Sum_probs=198.3
Q ss_pred CCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC----------------
Q 010051 13 TKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG---------------- 76 (519)
Q Consensus 13 ~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------- 76 (519)
.....+++|+|||.+|+++ |+.|++||+.+++....+.... +..+......++||||+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENST----FDEFGHSINDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTT----TTTCCSCCCEEEECTTSSEEEEEEEEEECSSSC
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechh----hhhhcccccceEECCCCCEEEEEECCeeeEEEc
Confidence 3456789999999999986 8999999999998654322111 11122223457888885
Q ss_pred --CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEe-cccccCe-----
Q 010051 77 --GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQIL-DAHFHYV----- 148 (519)
Q Consensus 77 --~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~v----- 148 (519)
+.+.+||+.++ + ...+..|...+..++|||||+.||.+. ++.|++|++.+++..+.. .++...+
T Consensus 90 ~~~~~~~~d~~~~------~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~ 161 (740)
T 4a5s_A 90 YTASYDIYDLNKR------Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGIT 161 (740)
T ss_dssp EEEEEEEEETTTT------E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBC
T ss_pred cceEEEEEECCCC------c-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcc
Confidence 34568888876 2 344666788899999999999999885 689999999888765432 2332222
Q ss_pred ------------EEEEEcCCCCeEEEeeCCCe-EEEEecCCCCccccccccceeeEEEeccCcc-------cccCCc---
Q 010051 149 ------------QGVAWDPLSKYVASLSSDRT-CRIYANRPTKSKGVEKMNYVCQHVITKAGQH-------STDDSK--- 205 (519)
Q Consensus 149 ------------~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--- 205 (519)
..+.|||||++|+.++.|.. +.+|++....... ...+......+...+.. +.....
T Consensus 162 ~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~-~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 162 DWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES-LQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS 240 (740)
T ss_dssp CHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT-CSSCEEEEEECCBTTSCCCEEEEEEEETTSCCS
T ss_pred cccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC-CCCCcceeecCCCCcCcCCeeEEEEEECCCCCC
Confidence 34899999999998876544 7777653221110 00000000000000000 000000
Q ss_pred cccceeeecC------CCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC----c-ccccC--CCCCC
Q 010051 206 SAKNHLFHDE------TLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS----R-PALQL--PGASK 272 (519)
Q Consensus 206 ~~~~~~~~~~------~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~----~-~~~~~--~~~~~ 272 (519)
.......... .+...+..++|+|||+.++..... ......|++||..... . ....+ ..+..
T Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r------~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~ 314 (740)
T 4a5s_A 241 VTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRR------IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTG 314 (740)
T ss_dssp SSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEES------STTEEEEEEEEEETTTTEEEECGGGCEEEECSSS
T ss_pred CCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCC------CCCEEEEEEEECCCCccccceeEEEEeeeccCCc
Confidence 0000011111 255678899999999977664432 1222478999987654 1 11212 33444
Q ss_pred CeE-----EEEEcCCcccccccCCCCcccccceEEEEEe-cC--CeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCE
Q 010051 273 PVV-----AVRFCPLAFNLRESNSAGFFKLPYRLIFAIA-TL--NSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARY 344 (519)
Q Consensus 273 ~v~-----~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~-~d--~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 344 (519)
.+. .+.|+|||+.++ +..+ .+ ..|++||+.++.......+ ...+..+.+ +|++.
T Consensus 315 ~v~~~~~~~p~fspDG~~l~---------------~~~s~~~G~~~l~~~~~~~~~~~~lT~g--~~~v~~~~~-~d~~~ 376 (740)
T 4a5s_A 315 WVGRFRPSEPHFTLDGNSFY---------------KIISNEEGYRHICYFQIDKKDCTFITKG--TWEVIGIEA-LTSDY 376 (740)
T ss_dssp CSSSSSCCCCEECTTSSEEE---------------EEEECTTSCEEEEEEETTCSSCEESCCS--SSCEEEEEE-ECSSE
T ss_pred eEccCcCCCceEcCCCCEEE---------------EEEEcCCCceEEEEEECCCCceEecccC--CEEEEEEEE-EeCCE
Confidence 443 688999996543 1222 22 4789999987766544433 445555442 34655
Q ss_pred EEE-EeC----CCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCC
Q 010051 345 LAL-SSQ----DGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTND 399 (519)
Q Consensus 345 l~~-~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d 399 (519)
|+. ++. .+...||.+..........+.............+.|||++.+++.....
T Consensus 377 i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~ 436 (740)
T 4a5s_A 377 LYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSG 436 (740)
T ss_dssp EEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECS
T ss_pred EEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCC
Confidence 544 443 2445666554332111112211100112456778999999887655433
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=2.3e-19 Score=166.43 Aligned_cols=257 Identities=11% Similarity=0.093 Sum_probs=163.7
Q ss_pred CCCCEEEEEEecCCCEEEEEcCC----CcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccC
Q 010051 12 DTKPVLTLDFHPISGLLATGGAD----YDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTT 87 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~ 87 (519)
|...+..++|+|||++|++++.+ +.|.+|++..... .+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g------------------------------~~-------- 89 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG------------------------------TL-------- 89 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT------------------------------EE--------
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC------------------------------cE--------
Confidence 66778889999999988888775 6888888764210 00
Q ss_pred CCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEEe------cc--------cccCeEEEE
Q 010051 88 ETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQIL------DA--------HFHYVQGVA 152 (519)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~------~~--------h~~~v~~~~ 152 (519)
..+.....+......+++ ++++|++++ .++.|.+|++.....+..+ .+ +...+.+++
T Consensus 90 ------~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 90 ------HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp ------EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred ------EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 111222223455677787 788887776 5789999999754332211 11 123458899
Q ss_pred EcCCCCeEEEee-CCCeEEEEecCCCCcccccc-ccce-eeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 153 WDPLSKYVASLS-SDRTCRIYANRPTKSKGVEK-MNYV-CQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 153 ~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
|+|++++|++++ .++.|.+|++.......... +... ... .........+..++|+|+
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~--------------------~~~~~~~~~~~~~~~spd 221 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE--------------------AFKVAPGSGPRHLIFNSD 221 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE--------------------EEECCTTCCEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc--------------------ceecCCCCCCeEEEEcCC
Confidence 999999776655 48899999987643100000 0000 000 000112334668999999
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCc----ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSR----PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~----~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
|++++++.... +.+.+|++..... .......+......++|+|+|++ ++++
T Consensus 222 g~~l~v~~~~~---------~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~----------------l~v~ 276 (361)
T 3scy_A 222 GKFAYLINEIG---------GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKY----------------LYAS 276 (361)
T ss_dssp SSEEEEEETTT---------CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSE----------------EEEE
T ss_pred CCEEEEEcCCC---------CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCE----------------EEEE
Confidence 99888766321 6889999864321 11223344456789999999944 4444
Q ss_pred e-c-CCeEEEEeCC--CCCc--eEEEeccccccEEEEEEcCCCCEEEEEe-CCCcEEEEEecC
Q 010051 306 A-T-LNSLYIYDTE--SVPP--IAILAGLHYAAITDIAWSNNARYLALSS-QDGYCTLVEFEN 361 (519)
Q Consensus 306 ~-~-d~~i~vwd~~--~~~~--~~~~~~~~~~~i~~~~~s~~g~~l~~~~-~dg~i~vwd~~~ 361 (519)
. . ++.|.+|++. +++. +..+.. ...+.+++|+|+|++|++++ .++.|.+|+++.
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 4 3 4799999986 4442 333332 34678999999999998887 568999987763
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=6.2e-21 Score=180.12 Aligned_cols=217 Identities=16% Similarity=0.146 Sum_probs=151.8
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcc
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQ 91 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~ 91 (519)
+...+..+++++++.+|++++.++ ++||+........ ....+... +...
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~---------~~~~~~~~--------------~~~~------- 83 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQN---------KPGDDPNK--------------IVDK------- 83 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCC---------CTTCCTTC--------------EEEC-------
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhc---------ccccCccc--------------cccc-------
Confidence 345689999999999999999888 9998865321100 00000000 0000
Q ss_pred cceeeeccccCCCCeEEEEEcCCCCEEE----EEeCCCeEEEEEcCCC--------c---eEEEecccccCeEEEEEcCC
Q 010051 92 AWKVLKNLSFHRKDVLDLQWSTDGAFLL----SGSVDNSCIIWDVNKG--------S---VLQILDAHFHYVQGVAWDPL 156 (519)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~----~~~~dg~i~vwd~~~~--------~---~~~~~~~h~~~v~~~~~~~~ 156 (519)
.....+ .+...|++++|+|+|++|+ +|+.|+.|++||+.++ + .+..+.+|...|.+++|+|+
T Consensus 84 --~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~ 160 (434)
T 2oit_A 84 --VQGLLV-PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPT 160 (434)
T ss_dssp --CCCEEE-CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSS
T ss_pred --Cccccc-cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCC
Confidence 001111 2567899999999999999 7888999999998765 1 14556779999999999998
Q ss_pred -CCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEE
Q 010051 157 -SKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLV 235 (519)
Q Consensus 157 -~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~ 235 (519)
+++|++++.||+|++||++++.. +..
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~-----------------------------------------------------~~~ 187 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVK-----------------------------------------------------VCA 187 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEE-----------------------------------------------------EEE
T ss_pred CCCEEEEEECCCeEEEEEcCCCcc-----------------------------------------------------eee
Confidence 78999999999999999876310 000
Q ss_pred ecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEe
Q 010051 236 PAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYD 315 (519)
Q Consensus 236 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd 315 (519)
..+|...|.+++|+|+| +++++++.||.|++||
T Consensus 188 -------------------------------~~~~~~~v~~v~wspdg----------------~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 188 -------------------------------TLPSTVAVTSVCWSPKG----------------KQLAVGKQNGTVVQYL 220 (434)
T ss_dssp -------------------------------EECGGGCEEEEEECTTS----------------SCEEEEETTSCEEEEC
T ss_pred -------------------------------ccCCCCceeEEEEcCCC----------------CEEEEEcCCCcEEEEc
Confidence 01245568888888887 4567777788999999
Q ss_pred CCCCCceEEEec------cccccEEEEEEcCCCCEEEEE-eCCC------cEEEEEecCCc
Q 010051 316 TESVPPIAILAG------LHYAAITDIAWSNNARYLALS-SQDG------YCTLVEFENDE 363 (519)
Q Consensus 316 ~~~~~~~~~~~~------~~~~~i~~~~~s~~g~~l~~~-~~dg------~i~vwd~~~~~ 363 (519)
++ ++....+.. .|...|.+++|++++.++++. +.|| .+++|++...+
T Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 221 PT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp TT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred cC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 88 555555543 123489999999998887654 3443 38999998653
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=8e-20 Score=168.56 Aligned_cols=277 Identities=14% Similarity=0.101 Sum_probs=170.6
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCc--eEEEecccccCeEE
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSV---DNSCIIWDVNKGS--VLQILDAHFHYVQG 150 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~~--~~~~~~~h~~~v~~ 150 (519)
++.|.+|.+...... +..+. ...+...+..++|+|||+ |++++. ++.|++|++.++. .+..+..+...+..
T Consensus 15 ~~~i~v~~~d~~tg~--~~~~~-~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKT--LTNDG-LLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp CCEEEEEEEETTTTE--EEEEE-EEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCCEEEEEEcCCCCe--EEEee-eeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 456777766542111 11112 223456678899999999 665554 6899999998776 34444556778889
Q ss_pred EEEcCCCCeEEEee-CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 151 VAWDPLSKYVASLS-SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 151 ~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
++|+|++++|++++ .++.|.+|++....... ....+...+... . .......+.+++|+|+
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~-------~~~~~~~~~~~p-----------~-~~~~~~~~~~~~~spd 151 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALT-------LTDTVQHSGHGP-----------R-PEQDGSHIHYTDLTPD 151 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEE-------EEEEEECCCCCS-----------S-TTCSSCCEEEEEECTT
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCee-------ecceeecCCCCC-----------C-ccccCCCceEEEECCC
Confidence 99999999988887 68999999996422100 000010000000 0 0112345778999999
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCccc--ccC-CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA--LQL-PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA 306 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~--~~~-~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~ 306 (519)
|+.+++...+ +.+++|++....... ..+ .........++|+|+|+++ +++..
T Consensus 152 g~l~v~~~~~----------~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l---------------~v~~~ 206 (347)
T 3hfq_A 152 NRLAVIDLGS----------DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYA---------------FLAGE 206 (347)
T ss_dssp SCEEEEETTT----------TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEE---------------EEEET
T ss_pred CcEEEEeCCC----------CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEE---------------EEEeC
Confidence 9944443333 589999987332211 111 1223357789999999532 34455
Q ss_pred cCCeEEEEeCCC--CCc--eEEEecccc------ccEEEEEEcCCCCEEE-EEeCCCcEEEEEecCC-cccceeeecCCc
Q 010051 307 TLNSLYIYDTES--VPP--IAILAGLHY------AAITDIAWSNNARYLA-LSSQDGYCTLVEFEND-ELGIPISLSGNK 374 (519)
Q Consensus 307 ~d~~i~vwd~~~--~~~--~~~~~~~~~------~~i~~~~~s~~g~~l~-~~~~dg~i~vwd~~~~-~~~~~~~~~~~~ 374 (519)
.++.|.+|++.. ++. +..+.. .. ..+..++|+|||++|+ +...++.|.+|++... .+.....+..+
T Consensus 207 ~~~~v~v~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~- 284 (347)
T 3hfq_A 207 LSSQIASLKYDTQTGAFTQLGIVKT-IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE- 284 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEEES-SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS-
T ss_pred CCCEEEEEEecCCCCceEEeeeeee-cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC-
Confidence 678999999874 442 222222 11 4588999999999875 5556899999999743 22222222221
Q ss_pred ccccCCCCcccccCCccEEEeecCC-cee-eec
Q 010051 375 VSKDENKSPLVTKSEDMIIEASTND-KLV-TAE 405 (519)
Q Consensus 375 ~~~~~~~~~~~~s~~~~~l~~~~~d-~~i-~~~ 405 (519)
...+..++|+|||++|++++.+ +.+ +|.
T Consensus 285 ---~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 285 ---GDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp ---SSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ---CCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 2456789999999988777643 444 553
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.5e-19 Score=170.60 Aligned_cols=185 Identities=16% Similarity=0.133 Sum_probs=133.1
Q ss_pred cCCCCCEEEEEEecCCCEEE----EEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 10 WHDTKPVLTLDFHPISGLLA----TGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 10 ~~h~~~V~~~~~sp~~~~la----~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
..|...|++++|+|+|++|| +|+.|+.|+|||+.++..... .
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~--------------~-------------------- 134 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK--------------Q-------------------- 134 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC--------------S--------------------
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCc--------------C--------------------
Confidence 45677899999999999999 788899999999876411000 0
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEee
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTD-GAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLS 164 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 164 (519)
....+..+..+.+|...|++++|+|+ +.+|++++.||+|++||++++..+....+|...|.+++|+|++++|++++
T Consensus 135 ---~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 135 ---QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp ---SCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE
T ss_pred ---CcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc
Confidence 00000234455678999999999998 78999999999999999999977777778899999999999999999999
Q ss_pred CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCC-ccee
Q 010051 165 SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGS-YKIS 243 (519)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~-~~~~ 243 (519)
.||.|++||++ ++........ ......+...+.+++|++++.++++.+.. +.+
T Consensus 212 ~dg~v~iwd~~-~~~~~~~~~~------------------------~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~- 265 (434)
T 2oit_A 212 QNGTVVQYLPT-LQEKKVIPCP------------------------PFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL- 265 (434)
T ss_dssp TTSCEEEECTT-CCEEEEECCC------------------------TTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS-
T ss_pred CCCcEEEEccC-CcccccccCC------------------------cccCCCCceeEEEEEEecCceEEEEEccCCCcc-
Confidence 99999999987 3211000000 00001223478899999998888654322 111
Q ss_pred eeecccceEEEEeccCC
Q 010051 244 SMSESINSAYIFSRKDL 260 (519)
Q Consensus 244 ~~~~~~~~i~i~~~~~~ 260 (519)
.....+++|++...
T Consensus 266 ---~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 266 ---ETSPDVVMALLPKK 279 (434)
T ss_dssp ---SSCCEEEEEECCCT
T ss_pred ---CCCCceEEEEeccC
Confidence 11245889998754
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=1.2e-18 Score=161.50 Aligned_cols=275 Identities=12% Similarity=0.062 Sum_probs=172.5
Q ss_pred CCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCC--Cce--EEEeccccc
Q 010051 75 CGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD----NSCIIWDVNK--GSV--LQILDAHFH 146 (519)
Q Consensus 75 ~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~vwd~~~--~~~--~~~~~~h~~ 146 (519)
.++.|.+|.+..... .+..+... +...+..++|+|||++|++++.+ +.|.+|++.. ++. +.....+..
T Consensus 25 ~~~~i~~~~~d~~~g--~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 25 NSKGIYTFRFNEETG--ESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp SCCEEEEEEEETTTC--CEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CCCCEEEEEEeCCCC--CEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 356788887754211 11223333 56778889999999999999886 7999999876 433 333344555
Q ss_pred CeEEEEEcCCCCeEEEee-CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEE
Q 010051 147 YVQGVAWDPLSKYVASLS-SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLA 225 (519)
Q Consensus 147 ~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 225 (519)
....+++ ++++|++++ .++.|.+|++........... .....+.. ..........+.+++
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~------~~~~~g~~-----------~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASD------VIEFKGSG-----------PDKERQTMPHLHCVR 161 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSE------EEECCCCC-----------SCTTTCSSCCEEEEE
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccce------eEEccCCC-----------CCccccCCCcceEEE
Confidence 6777888 788777766 578999999975432111000 00000000 000011233467899
Q ss_pred EccCCCeEEEecCCcceeeeecccceEEEEeccCCCc------c------cccCCCCCCCeEEEEEcCCcccccccCCCC
Q 010051 226 WSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR------P------ALQLPGASKPVVAVRFCPLAFNLRESNSAG 293 (519)
Q Consensus 226 ~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~------~------~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 293 (519)
|+|+|++++++.... +.+++|++..... . .............++|+|+|+
T Consensus 162 ~spdg~~l~~~~~~~---------~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~--------- 223 (361)
T 3scy_A 162 ITPDGKYLLADDLGT---------DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK--------- 223 (361)
T ss_dssp ECTTSSEEEEEETTT---------TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS---------
T ss_pred ECCCCCEEEEEeCCC---------CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC---------
Confidence 999999887765322 5889998865432 1 111223445678999999994
Q ss_pred cccccceEEEEEe-cCCeEEEEeCCCCCce--EEEec--cccccEEEEEEcCCCCEEEEEeCC--CcEEEEEec--CCcc
Q 010051 294 FFKLPYRLIFAIA-TLNSLYIYDTESVPPI--AILAG--LHYAAITDIAWSNNARYLALSSQD--GYCTLVEFE--NDEL 364 (519)
Q Consensus 294 ~~~~~~~~~~~~~-~d~~i~vwd~~~~~~~--~~~~~--~~~~~i~~~~~s~~g~~l~~~~~d--g~i~vwd~~--~~~~ 364 (519)
++++++ .++.|.+|++.++... ..+.. .+......++|+|||++|++++.+ +.|.+|+++ ++.+
T Consensus 224 -------~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~ 296 (361)
T 3scy_A 224 -------FAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL 296 (361)
T ss_dssp -------EEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE
T ss_pred -------EEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE
Confidence 444444 5789999999876542 22222 133456899999999998776654 899999996 3332
Q ss_pred cceeeecCCcccccCCCCcccccCCccEEEeec-CCcee
Q 010051 365 GIPISLSGNKVSKDENKSPLVTKSEDMIIEAST-NDKLV 402 (519)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~d~~i 402 (519)
........ ...+..++|+|||++|++++ .++.+
T Consensus 297 ~~~~~~~~-----g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 297 TKVGYQLT-----GIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp EEEEEEEC-----SSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred EEeeEecC-----CCCCceEEECCCCCEEEEEECCCCCE
Confidence 22222211 24567899999999888776 44444
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.3e-20 Score=191.63 Aligned_cols=294 Identities=14% Similarity=0.145 Sum_probs=184.4
Q ss_pred eeEEecCCCC---CEEEEEEecCCCEEEEEcC---------CCcEEEEEecCCccccccccccccccccccCcceeEEEE
Q 010051 5 TLQINWHDTK---PVLTLDFHPISGLLATGGA---------DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRF 72 (519)
Q Consensus 5 ~~~~~~~h~~---~V~~~~~sp~~~~la~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 72 (519)
..+++.+|.. .|.+++|||||++||+++. ++.|++||+.+++...... + ...+..++|
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-------l---~~~~~~~~~ 117 (719)
T 1z68_A 48 SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-------L---PRPIQYLCW 117 (719)
T ss_dssp EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-------C---CSSBCCEEE
T ss_pred EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-------c---CcccccceE
Confidence 3344444433 4999999999999998876 6899999999887531111 1 245778899
Q ss_pred ccCC--------CeEEEEEcccCCCcccceeeeccccCCCCe-----------------EEEEEcCCCCEEEEEeCCC--
Q 010051 73 SPCG--------GELIIWKLHTTETGQAWKVLKNLSFHRKDV-----------------LDLQWSTDGAFLLSGSVDN-- 125 (519)
Q Consensus 73 ~~~~--------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~s~~~~~l~~~~~dg-- 125 (519)
+|+| +.|++|++.++... . ....++...| .+++|||||++|++++.|.
T Consensus 118 SPDG~~la~~~~~~i~~~~~~~g~~~----~-l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~ 192 (719)
T 1z68_A 118 SPVGSKLAYVYQNNIYLKQRPGDPPF----Q-ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTD 192 (719)
T ss_dssp CSSTTCEEEEETTEEEEESSTTSCCE----E-CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTT
T ss_pred CCCCCEEEEEECCeEEEEeCCCCCcE----E-EecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCC
Confidence 9985 67889998766321 1 1112222222 4899999999999988652
Q ss_pred --------------------------------eEEEEEcCCCceE---E-----EecccccCeEEEEEcCCCCeEEEeeC
Q 010051 126 --------------------------------SCIIWDVNKGSVL---Q-----ILDAHFHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 126 --------------------------------~i~vwd~~~~~~~---~-----~~~~h~~~v~~~~~~~~~~~l~~~~~ 165 (519)
.|++||+.+++.. . .+.+|...+..++|+||++++++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~ 272 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK 272 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec
Confidence 7899999887652 2 23457788999999999877766443
Q ss_pred C----CeEEEEe----cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceee-----EEEEccCCCe
Q 010051 166 D----RTCRIYA----NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFR-----RLAWSPDGSF 232 (519)
Q Consensus 166 d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~sp~g~~ 232 (519)
. ..|.+|| +.+++...... .....+...+. .+.|+|||+.
T Consensus 273 ~~~~~~~l~~~d~~~~~~~g~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 273 RVQNVSVLSICDFREDWQTWDCPKTQE---------------------------HIEESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp SSTTEEEEEEEEECSSSSSEECCGGGE---------------------------EEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred cccCeEEEEEEcccCCCCCCceEEEEe---------------------------cccccCCceEccccCCccEECCCCCe
Confidence 2 2488888 65543221110 00001223333 6899999997
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec----C
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT----L 308 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~----d 308 (519)
++....+. .....+++|++.... ...+..+...+..+.++ ++..+ ++++.. +
T Consensus 326 l~~~~~~~------~g~~~l~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~~i---------------~~~~~~~~~~~ 381 (719)
T 1z68_A 326 YYKIFSDK------DGYKHIHYIKDTVEN--AIQITSGKWEAINIFRV-TQDSL---------------FYSSNEFEEYP 381 (719)
T ss_dssp EEEEEECT------TSCEEEEEESSCSTT--CEECSCSSSCEEEEEEE-CSSEE---------------EEEESCGGGCT
T ss_pred EEEEEEcc------CCceEEEEEECCCCc--eEecccCceEEEEEEEE-eCCEE---------------EEEEecCCCCC
Confidence 76532110 112468888875433 34455556667777777 66432 333333 3
Q ss_pred CeEEEEeCCC--CCc-eEEEec---cccccEEEEEEcCCCCEEEEE-eCC--CcEEEEEecCCcc
Q 010051 309 NSLYIYDTES--VPP-IAILAG---LHYAAITDIAWSNNARYLALS-SQD--GYCTLVEFENDEL 364 (519)
Q Consensus 309 ~~i~vwd~~~--~~~-~~~~~~---~~~~~i~~~~~s~~g~~l~~~-~~d--g~i~vwd~~~~~~ 364 (519)
+.+++|.+.. +.. ...+.. .|...+..+.|+|++++|+.. +.+ ..+.+||+.+++.
T Consensus 382 ~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 382 GRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE 446 (719)
T ss_dssp TCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred ceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence 6777777653 421 233321 145678889999999887754 333 4688898877653
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=1.9e-19 Score=166.91 Aligned_cols=250 Identities=12% Similarity=0.105 Sum_probs=161.5
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEec-CCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCc
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLIN-SGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETG 90 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~ 90 (519)
+...+..++|+|||++|++++.+ .|.+|++. +++.....
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~--------------------------------------- 77 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA--------------------------------------- 77 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE---------------------------------------
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee---------------------------------------
Confidence 34467888999999988888777 78888886 55421100
Q ss_pred ccceeeeccccCCCCeEEEEEcCCCCE--EEEEe-------------CCCeEEEEEcC-CCceEEEec----ccccCeEE
Q 010051 91 QAWKVLKNLSFHRKDVLDLQWSTDGAF--LLSGS-------------VDNSCIIWDVN-KGSVLQILD----AHFHYVQG 150 (519)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~~~~-------------~dg~i~vwd~~-~~~~~~~~~----~h~~~v~~ 150 (519)
....+ +.+.+++|+|||++ ++++. .++.+.+|++. +++....+. .+...+.+
T Consensus 78 -------~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (365)
T 1jof_A 78 -------SHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHG 149 (365)
T ss_dssp -------EEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEE
T ss_pred -------EeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceE
Confidence 00000 11334677888874 44442 68999999997 466544333 24567899
Q ss_pred EEEcCCCCeEEEeeC-CCeEEEEecC-CCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc
Q 010051 151 VAWDPLSKYVASLSS-DRTCRIYANR-PTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP 228 (519)
Q Consensus 151 ~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 228 (519)
++|+|+|++|+++.. ++.|.+|++. +++.... .. .....+...+..++|+|
T Consensus 150 ~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~--------~~-------------------~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 150 MVFDPTETYLYSADLTANKLWTHRKLASGEVELV--------GS-------------------VDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE--------EE-------------------EECSSTTCCEEEEEECT
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEe--------ee-------------------EecCCCCCCCCEeEECC
Confidence 999999998887664 6799999997 4432100 00 00001134477899999
Q ss_pred CCCeEEEecCCcceeeeecccceEEEEeccCC-Ccc------cccCCC----CCC------CeEEEE-EcCCcccccccC
Q 010051 229 DGSFLLVPAGSYKISSMSESINSAYIFSRKDL-SRP------ALQLPG----ASK------PVVAVR-FCPLAFNLRESN 290 (519)
Q Consensus 229 ~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~-~~~------~~~~~~----~~~------~v~~~~-~sp~~~~l~~~~ 290 (519)
+|++++++.... +.+.+|++... ... +..+.. +.. .+..++ |+|||++
T Consensus 203 dg~~l~v~~~~~---------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~----- 268 (365)
T 1jof_A 203 TGNYLYALMEAG---------NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY----- 268 (365)
T ss_dssp TSSEEEEEETTT---------TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE-----
T ss_pred CCCEEEEEECCC---------CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCE-----
Confidence 999998765432 57788776421 111 112222 222 478999 9999954
Q ss_pred CCCcccccceEEEEEec-CC-----eEEEEeCC-CCCceEE---EeccccccEEEEEEcC---CCCEEEEEeCC-CcEEE
Q 010051 291 SAGFFKLPYRLIFAIAT-LN-----SLYIYDTE-SVPPIAI---LAGLHYAAITDIAWSN---NARYLALSSQD-GYCTL 356 (519)
Q Consensus 291 ~~g~~~~~~~~~~~~~~-d~-----~i~vwd~~-~~~~~~~---~~~~~~~~i~~~~~s~---~g~~l~~~~~d-g~i~v 356 (519)
++++.. .+ .|.+|++. +++.... +.. +...+..++|+| ||++|++++.+ +.|.+
T Consensus 269 -----------l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 269 -----------MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp -----------EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-SSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred -----------EEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-CCCCcccceecCCCcCCCEEEEEEcCCCeEEE
Confidence 444432 23 89999986 5664432 222 444567899999 89999999875 89999
Q ss_pred EEecCC
Q 010051 357 VEFEND 362 (519)
Q Consensus 357 wd~~~~ 362 (519)
|+++..
T Consensus 337 ~~~~~~ 342 (365)
T 1jof_A 337 YRWKDE 342 (365)
T ss_dssp EEEETT
T ss_pred EEEchh
Confidence 999876
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.83 E-value=4.1e-19 Score=167.12 Aligned_cols=287 Identities=7% Similarity=0.011 Sum_probs=176.2
Q ss_pred CCeeEEecCCCCC-----EEEEEEecCCCEEEEEcCC---CcEEEEEecCCccccccccccccccccccCcceeEEEEcc
Q 010051 3 GGTLQINWHDTKP-----VLTLDFHPISGLLATGGAD---YDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSP 74 (519)
Q Consensus 3 ~~~~~~~~~h~~~-----V~~~~~sp~~~~la~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 74 (519)
++.+..+..+... +.+++|||||++||.+... ..|.+||+.+++...
T Consensus 20 g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~------------------------- 74 (396)
T 3c5m_A 20 QVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ------------------------- 74 (396)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-------------------------
T ss_pred CcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-------------------------
Confidence 3445555554443 7788999999998876442 356677766554211
Q ss_pred CCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEE----
Q 010051 75 CGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQG---- 150 (519)
Q Consensus 75 ~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~---- 150 (519)
...++......+.|+|||++|+.++.++.|++||+.+++....+..+......
T Consensus 75 -----------------------l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l 131 (396)
T 3c5m_A 75 -----------------------LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWV 131 (396)
T ss_dssp -----------------------CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEE
T ss_pred -----------------------eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEE
Confidence 00111111223689999999999999999999999988766555544332222
Q ss_pred ---------------EEEcCCCCeEEEe-----eCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccce
Q 010051 151 ---------------VAWDPLSKYVASL-----SSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNH 210 (519)
Q Consensus 151 ---------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (519)
+.|+|+++.++.. ..+..|.+||+.+++.....
T Consensus 132 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--------------------------- 184 (396)
T 3c5m_A 132 ANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--------------------------- 184 (396)
T ss_dssp ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---------------------------
T ss_pred EeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec---------------------------
Confidence 3457777766554 35667888888765421110
Q ss_pred eeecCCCcceeeEEEEcc-CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCC--CCCeEEEEEcCCccccc
Q 010051 211 LFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGA--SKPVVAVRFCPLAFNLR 287 (519)
Q Consensus 211 ~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~ 287 (519)
.....+..+.|+| +++.|+..+.... ......+++|+..... ...+..+ ...+..+.|+|+|+.|+
T Consensus 185 -----~~~~~~~~~~~sp~dg~~l~~~~~~~~----~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 185 -----QDTAWLGHPIYRPFDDSTVGFCHEGPH----DLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp -----EESSCEEEEEEETTEEEEEEEEECSCS----SSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEE
T ss_pred -----cCCcccccceECCCCCCEEEEEecCCC----CCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEE
Confidence 1124466899999 8887777653210 0011468888875432 2222222 23578899999996543
Q ss_pred ccCCCCcccccceEEEEEecC-----CeEEEEeCCCCCceEEEeccccccEEEEEEcC-CCCEEEEEe------------
Q 010051 288 ESNSAGFFKLPYRLIFAIATL-----NSLYIYDTESVPPIAILAGLHYAAITDIAWSN-NARYLALSS------------ 349 (519)
Q Consensus 288 ~~~~~g~~~~~~~~~~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~------------ 349 (519)
.++.+ +.|++||+.+++....... . ... +.|+| +|++|++++
T Consensus 254 ----------------~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 254 ----------------YVSYFKGQTDRVIYKANPETLENEEVMVM--P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp ----------------EEEEETTTCCEEEEEECTTTCCEEEEEEC--C-SEE-EEEECSSSSEEEEEECCC---------
T ss_pred ----------------EEecCCCCccceEEEEECCCCCeEEeeeC--C-CCC-CCccCCCCceEEEecCCcceeeccccc
Confidence 22221 4599999998875543322 1 233 89999 999888765
Q ss_pred ----CCCcEEEEEecCCcccceeeecCCcc-------cccCCCCcccccCCccEEEeecC
Q 010051 350 ----QDGYCTLVEFENDELGIPISLSGNKV-------SKDENKSPLVTKSEDMIIEASTN 398 (519)
Q Consensus 350 ----~dg~i~vwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~s~~~~~l~~~~~ 398 (519)
.++.|++||+.+++... +. .+.. ........+.|+|||..|++.+.
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~~-l~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQK-LC--KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCCE-EE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cccCCCCcEEEEecccCceEE-cc--CCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 24789999998775432 22 1110 00112566889999998887764
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=1.4e-19 Score=179.07 Aligned_cols=232 Identities=10% Similarity=0.033 Sum_probs=160.1
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCceEEEecccc-cCeEEEEEcCCCCeEEEeeC---CCeEEEEecCC-
Q 010051 103 RKDVLDLQWSTDGAFLLSGSV-DNSCIIWDVNKGSVLQILDAHF-HYVQGVAWDPLSKYVASLSS---DRTCRIYANRP- 176 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~- 176 (519)
..+|.+++|+|||++||+++. ||++.||++.+++..+ +..|. ..+..+.|+|+ +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 557999999999999999887 9999999997766544 44444 68999999999 77777765 45566665543
Q ss_pred -CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEE
Q 010051 177 -TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIF 255 (519)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~ 255 (519)
..... .+ .....+...+|+|+|+.++..+... +.+.+|
T Consensus 99 ~~g~~~--~l------------------------------~~~~~~~~~~~s~dg~~~~~~s~~~---------~~~~l~ 137 (582)
T 3o4h_A 99 RPGEEQ--RL------------------------------EAVKPMRILSGVDTGEAVVFTGATE---------DRVALY 137 (582)
T ss_dssp STTCCE--EC------------------------------TTSCSBEEEEEEECSSCEEEEEECS---------SCEEEE
T ss_pred CCCccc--cc------------------------------cCCCCceeeeeCCCCCeEEEEecCC---------CCceEE
Confidence 21100 00 0011233568899987654433221 345589
Q ss_pred eccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecC----CeEEEEeCCCCCceEEEeccccc
Q 010051 256 SRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL----NSLYIYDTESVPPIAILAGLHYA 331 (519)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~ 331 (519)
|+.+... . .+..+.. .+++|+|||+. +++++.+ +.|++||+.+++.. .+.. |..
T Consensus 138 d~~~g~~-~-~l~~~~~--~~~~~spDG~~----------------la~~~~~~~~~~~i~~~d~~~g~~~-~l~~-~~~ 195 (582)
T 3o4h_A 138 ALDGGGL-R-ELARLPG--FGFVSDIRGDL----------------IAGLGFFGGGRVSLFTSNLSSGGLR-VFDS-GEG 195 (582)
T ss_dssp EEETTEE-E-EEEEESS--CEEEEEEETTE----------------EEEEEEEETTEEEEEEEETTTCCCE-EECC-SSC
T ss_pred EccCCcE-E-EeecCCC--ceEEECCCCCE----------------EEEEEEcCCCCeEEEEEcCCCCCce-Eeec-CCC
Confidence 8865432 2 2222222 78999999954 5544444 67999999988765 5566 788
Q ss_pred cEEEEEEcCCCCEEEEEeCCC--cEEEEEecCCcccceeeecCCcccccCCCCccc--------ccCCccEEEeecCCce
Q 010051 332 AITDIAWSNNARYLALSSQDG--YCTLVEFENDELGIPISLSGNKVSKDENKSPLV--------TKSEDMIIEASTNDKL 401 (519)
Q Consensus 332 ~i~~~~~s~~g~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~s~~~~~l~~~~~d~~ 401 (519)
.+..++|||||++|+++..++ .|++||+.+++.. .+.++. ..+..++ |+|||.++++++.++.
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~ 268 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE---DLELPS----KDFSSYRPTAITWLGYLPDGRLAVVARREGR 268 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE---ECCCSC----SHHHHHCCSEEEEEEECTTSCEEEEEEETTE
T ss_pred ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE---EccCCC----cChhhhhhccccceeEcCCCcEEEEEEcCCc
Confidence 899999999999999888888 8999999887543 333332 3445566 9999988888887776
Q ss_pred e-eecC
Q 010051 402 V-TAET 406 (519)
Q Consensus 402 i-~~~~ 406 (519)
+ +|..
T Consensus 269 ~~l~~~ 274 (582)
T 3o4h_A 269 SAVFID 274 (582)
T ss_dssp EEEEET
T ss_pred EEEEEE
Confidence 6 6665
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=6.3e-18 Score=171.71 Aligned_cols=248 Identities=14% Similarity=0.180 Sum_probs=163.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccC-----eEEEEEcCCCCeEEEeeCC---------CeEE
Q 010051 105 DVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHY-----VQGVAWDPLSKYVASLSSD---------RTCR 170 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~~~~~d---------g~i~ 170 (519)
...++.|+|||++|+++ |+.|++||+.+++....+..|... ...+.|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45689999999988886 899999999999988777777532 2347899999999998876 5677
Q ss_pred EEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccc
Q 010051 171 IYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESIN 250 (519)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~ 250 (519)
+||+.+++...+ ..+...+..++|||||+.|+.+.. +
T Consensus 96 ~~d~~~~~~~~l--------------------------------~~~~~~~~~~~~SPdG~~la~~~~-----------~ 132 (740)
T 4a5s_A 96 IYDLNKRQLITE--------------------------------ERIPNNTQWVTWSPVGHKLAYVWN-----------N 132 (740)
T ss_dssp EEETTTTEECCS--------------------------------SCCCTTEEEEEECSSTTCEEEEET-----------T
T ss_pred EEECCCCcEEEc--------------------------------ccCCCcceeeEECCCCCEEEEEEC-----------C
Confidence 999988753211 122345779999999999998754 4
Q ss_pred eEEEEeccCCCcccccCCCCCCCe-----------------EEEEEcCCcccccccCCCCc-ccccc-----------eE
Q 010051 251 SAYIFSRKDLSRPALQLPGASKPV-----------------VAVRFCPLAFNLRESNSAGF-FKLPY-----------RL 301 (519)
Q Consensus 251 ~i~i~~~~~~~~~~~~~~~~~~~v-----------------~~~~~sp~~~~l~~~~~~g~-~~~~~-----------~~ 301 (519)
.|++|+.........+..++...+ ..+.|||||+.|+....+.. +..+. ..
T Consensus 133 ~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~ 212 (740)
T 4a5s_A 133 DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPK 212 (740)
T ss_dssp EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCE
T ss_pred eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCc
Confidence 899999876543333333443323 34899999999887654332 21110 00
Q ss_pred EE------EEec--CCeEEEEeCCC---CC--ceEEEec-----cccccEEEEEEcCCCCEEEEEeC----CCcEEEEEe
Q 010051 302 IF------AIAT--LNSLYIYDTES---VP--PIAILAG-----LHYAAITDIAWSNNARYLALSSQ----DGYCTLVEF 359 (519)
Q Consensus 302 ~~------~~~~--d~~i~vwd~~~---~~--~~~~~~~-----~~~~~i~~~~~s~~g~~l~~~~~----dg~i~vwd~ 359 (519)
.. .|.. ...|++||+.+ ++ ....+.. .|...+..++|||||++++.... +..|++||+
T Consensus 213 ~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~ 292 (740)
T 4a5s_A 213 TVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDY 292 (740)
T ss_dssp EEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEE
T ss_pred ceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEEC
Confidence 00 0111 12689999998 73 2233321 16778999999999997766533 246999999
Q ss_pred cCCc----ccceeee--cCCccc-ccCCCCcccccCCccEEE-eec
Q 010051 360 ENDE----LGIPISL--SGNKVS-KDENKSPLVTKSEDMIIE-AST 397 (519)
Q Consensus 360 ~~~~----~~~~~~~--~~~~~~-~~~~~~~~~~s~~~~~l~-~~~ 397 (519)
.+++ ......+ .++... .......+.|+|||+.|+ ..+
T Consensus 293 ~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 293 DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE
Confidence 9876 2211111 222210 001134688999999876 554
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=1.3e-17 Score=153.85 Aligned_cols=265 Identities=10% Similarity=-0.013 Sum_probs=165.0
Q ss_pred EEEccCCCeEEEEEcccCCCcccceeeeccccCC-CCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEeccc---
Q 010051 70 LRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHR-KDVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAH--- 144 (519)
Q Consensus 70 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h--- 144 (519)
+.....++.|.+||+.++ +....+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++.+..+..+
T Consensus 14 ~v~~~~~~~v~~~d~~~~------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~ 87 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASD------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP 87 (349)
T ss_dssp EEEEETTTEEEEEETTTT------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred EEEeCCCCeEEEEECCCC------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc
Confidence 334456799999999876 4454444332 2578999999998765 4456899999999999887766532
Q ss_pred ---ccCeEEEEEcCCCCeEEEeeCC------------CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccc
Q 010051 145 ---FHYVQGVAWDPLSKYVASLSSD------------RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKN 209 (519)
Q Consensus 145 ---~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (519)
...+..++|+|++++|++++.+ +.|.+||+.+++......
T Consensus 88 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~------------------------- 142 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR------------------------- 142 (349)
T ss_dssp TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE-------------------------
T ss_pred ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee-------------------------
Confidence 2337889999999999988865 899999997643211100
Q ss_pred eeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCC------------------
Q 010051 210 HLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGAS------------------ 271 (519)
Q Consensus 210 ~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~------------------ 271 (519)
.. .....+.+++|+|+|+ +++++ +.+++||..+... ...+..+.
T Consensus 143 -~~---~~~~~~~~~~~s~dg~-l~~~~------------~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (349)
T 1jmx_B 143 -TF---PMPRQVYLMRAADDGS-LYVAG------------PDIYKMDVKTGKY-TVALPLRNWNRKGYSAPDVLYFWPHQ 204 (349)
T ss_dssp -EE---ECCSSCCCEEECTTSC-EEEES------------SSEEEECTTTCCE-EEEECSTTCCCTTBCCCBCCCCCCCC
T ss_pred -ec---cCCCcccceeECCCCc-EEEcc------------CcEEEEeCCCCce-eccccccccCCccccCccceeeecCC
Confidence 00 1123467899999999 55542 2478888765432 21221110
Q ss_pred --C----CeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceE-EEeccccccEEEEEEcC-CCC
Q 010051 272 --K----PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIA-ILAGLHYAAITDIAWSN-NAR 343 (519)
Q Consensus 272 --~----~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~i~~~~~s~-~g~ 343 (519)
. ....+++++++........ ....+..++..+++... .+.. +...+..++|+| +|+
T Consensus 205 ~~~~~~~~~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sp~dg~ 268 (349)
T 1jmx_B 205 SPRHEFSMLYTIARFKDDKQDPATAD---------------LLYGYLSVDLKTGKTHTQEFAD-LTELYFTGLRSPKDPN 268 (349)
T ss_dssp CTTCEEEEEEEEEEC-------CCCE---------------EEEEEEEEETTTCCEEEEEEEE-CSSCEEEEEECSSCTT
T ss_pred CcceeEEeeeeeeecCCCcCCccccc---------------cceeEEEEeccCCcEEeccccc-CCCcceeeEecCCCCC
Confidence 0 2234555544321110000 00112224555444221 1122 456788999999 999
Q ss_pred EEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecCCC
Q 010051 344 YLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAETKE 408 (519)
Q Consensus 344 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~~~ 408 (519)
+|+++ ++.|.+||+.+++....+.. ...+..++|+|++.+|++++.++.+ +|+...
T Consensus 269 ~l~~~--~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 269 QIYGV--LNRLAKYDLKQRKLIKAANL-------DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEEEE--ESEEEEEETTTTEEEEEEEC-------SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred EEEEE--cCeEEEEECccCeEEEEEcC-------CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 99988 88999999988765444332 2346789999999888777665555 666543
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=2.7e-17 Score=152.38 Aligned_cols=246 Identities=7% Similarity=0.064 Sum_probs=157.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCceEEEeccc-ccCeEEEEEcCCCCe--EEEee-------------CC
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVN-KGSVLQILDAH-FHYVQGVAWDPLSKY--VASLS-------------SD 166 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~--l~~~~-------------~d 166 (519)
..+..++|+|||++|++++.+ .|.+|++. +++........ .+.+.+++|+|++++ ++++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 457789999999999999887 99999997 77765433211 123556889999994 45553 68
Q ss_pred CeEEEEecCC-CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeee
Q 010051 167 RTCRIYANRP-TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSM 245 (519)
Q Consensus 167 g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~ 245 (519)
|.+.+|++.. ++.... ... +. ......+..++|+|+|++++++....
T Consensus 119 g~v~v~~~~~~g~~~~~-------~~~-------------------~~-~~~~~~~~~~~~spdG~~l~~~~~~~----- 166 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKN-------VQN-------------------YE-YQENTGIHGMVFDPTETYLYSADLTA----- 166 (365)
T ss_dssp CEEEEEEECTTCCEEEE-------EEE-------------------EE-CCTTCCEEEEEECTTSSEEEEEETTT-----
T ss_pred ceEEEEccCCCCcCcce-------Eee-------------------EE-eCCCCcceEEEECCCCCEEEEEcCCC-----
Confidence 9999999974 321100 000 00 01234577999999999988764321
Q ss_pred ecccceEEEEecc-CCCcc-cccCC--CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe-cCCeEEEEeCC--C
Q 010051 246 SESINSAYIFSRK-DLSRP-ALQLP--GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA-TLNSLYIYDTE--S 318 (519)
Q Consensus 246 ~~~~~~i~i~~~~-~~~~~-~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~-~d~~i~vwd~~--~ 318 (519)
+.|++|++. +.... ...+. .+...+..++|+|+|+ +++++. .++.|.+|++. +
T Consensus 167 ----~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~----------------~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 167 ----NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGN----------------YLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp ----TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSS----------------EEEEEETTTTEEEEEEECTTT
T ss_pred ----CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCC----------------EEEEEECCCCeEEEEEEeCCC
Confidence 589999986 33211 11221 2356689999999994 444444 46789998765 5
Q ss_pred CCceE---EEecc------ccc------cEEEEE-EcCCCCEEEEEeCCC------cEEEEEec-CCcccceee-ecCCc
Q 010051 319 VPPIA---ILAGL------HYA------AITDIA-WSNNARYLALSSQDG------YCTLVEFE-NDELGIPIS-LSGNK 374 (519)
Q Consensus 319 ~~~~~---~~~~~------~~~------~i~~~~-~s~~g~~l~~~~~dg------~i~vwd~~-~~~~~~~~~-~~~~~ 374 (519)
++... .+... |.. .+..++ |+|||++|++++.+. .|.+|++. ++++..... ...+
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~- 305 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP- 305 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS-
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC-
Confidence 65422 22210 121 588999 999999988776432 89999996 443322111 1111
Q ss_pred ccccCCCCcccccC---CccEEEeecCC-cee-eecC
Q 010051 375 VSKDENKSPLVTKS---EDMIIEASTND-KLV-TAET 406 (519)
Q Consensus 375 ~~~~~~~~~~~~s~---~~~~l~~~~~d-~~i-~~~~ 406 (519)
......++|+| ||++|+++..+ +.+ +|+.
T Consensus 306 ---~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 306 ---TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp ---SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ---CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 23567889999 89999888753 444 5543
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=1.4e-16 Score=142.50 Aligned_cols=245 Identities=11% Similarity=0.113 Sum_probs=167.4
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcc
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQ 91 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~ 91 (519)
|-..+.+++++|+++++++...++.|.+||.. ++....+. .
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~-------------------------------~------- 68 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFG-------------------------------E------- 68 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEEC-------------------------------C-------
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEec-------------------------------c-------
Confidence 44679999999999988888888999999865 33221110 0
Q ss_pred cceeeeccccCCCCeEEEEE-cCCCCEEEEEeC-CCeEEEEEcCCCceEEEec-ccccCeEEEEEcCCCCeEEEeeCCCe
Q 010051 92 AWKVLKNLSFHRKDVLDLQW-STDGAFLLSGSV-DNSCIIWDVNKGSVLQILD-AHFHYVQGVAWDPLSKYVASLSSDRT 168 (519)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~ 168 (519)
.....++...+..+++ .+++.++++... ++.|.+|| .+++.+..+. .+...+.+++++++++++++...++.
T Consensus 69 ----~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 143 (286)
T 1q7f_A 69 ----CGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMR 143 (286)
T ss_dssp ----BSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTE
T ss_pred ----cCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCE
Confidence 0001124456889999 467766665543 78999999 5777766664 33457899999999998887777899
Q ss_pred EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecc
Q 010051 169 CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSES 248 (519)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~ 248 (519)
|.+||...... ..+ ........+..++++|+|+.+++...+
T Consensus 144 i~~~~~~g~~~-----------~~~-------------------~~~~~~~~p~~i~~~~~g~l~v~~~~~--------- 184 (286)
T 1q7f_A 144 VIIFDQNGNVL-----------HKF-------------------GCSKHLEFPNGVVVNDKQEIFISDNRA--------- 184 (286)
T ss_dssp EEEECTTSCEE-----------EEE-------------------ECTTTCSSEEEEEECSSSEEEEEEGGG---------
T ss_pred EEEEcCCCCEE-----------EEe-------------------CCCCccCCcEEEEECCCCCEEEEECCC---------
Confidence 99998643210 000 000112346789999999877665444
Q ss_pred cceEEEEeccCCCcccccCC--CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC-eEEEEeCCCCCceEEE
Q 010051 249 INSAYIFSRKDLSRPALQLP--GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN-SLYIYDTESVPPIAIL 325 (519)
Q Consensus 249 ~~~i~i~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~-~i~vwd~~~~~~~~~~ 325 (519)
+.|++|+... ..+..+. ++...+..++++|+| +++++...++ .|.+|+. +++.+..+
T Consensus 185 -~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~G----------------~l~v~~~~~~~~i~~~~~-~g~~~~~~ 244 (286)
T 1q7f_A 185 -HCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSNG----------------EILIADNHNNFNLTIFTQ-DGQLISAL 244 (286)
T ss_dssp -TEEEEEETTC--CEEEEESCTTTSCSEEEEEECTTC----------------CEEEEECSSSCEEEEECT-TSCEEEEE
T ss_pred -CEEEEEcCCC--CEEEEEccCCccCCCcEEEECCCC----------------CEEEEeCCCCEEEEEECC-CCCEEEEE
Confidence 5888898743 2222232 233578899999988 4456666665 9999995 46666666
Q ss_pred ecccc--ccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 326 AGLHY--AAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 326 ~~~~~--~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
.. +. ..+.+++++|+|+++++ +.|++|++|++..
T Consensus 245 ~~-~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 245 ES-KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EE-SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred cc-cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 55 33 34789999999987777 6799999999754
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=1e-16 Score=146.09 Aligned_cols=282 Identities=14% Similarity=0.098 Sum_probs=183.4
Q ss_pred CCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCccc
Q 010051 13 TKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQA 92 (519)
Q Consensus 13 ~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~ 92 (519)
-+.|.+|+++|+|+++++...++.+.+++..... .+ ..+.... -.++.|.+||..++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~---~~---------~~~~~~~------~~~~~i~~~d~~~g----- 79 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKF---VY---------QQRGLGP------IEEDTILVIDPNNA----- 79 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTS---CB---------SCGGGCS------CCSCCEEEECTTTC-----
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcce---ee---------ccccccc------ccCCcEEEEECCCC-----
Confidence 4679999999999999988877765554332221 11 1111111 03578888888765
Q ss_pred ceeeeccc-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eEEEe---------cccccCeEEEEEcC-CCCeE
Q 010051 93 WKVLKNLS-FHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS-VLQIL---------DAHFHYVQGVAWDP-LSKYV 160 (519)
Q Consensus 93 ~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~---------~~h~~~v~~~~~~~-~~~~l 160 (519)
+....+. ++...+..++++++|+++++...++.|++||..... .+..+ ..+......++++| ++.++
T Consensus 80 -~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 80 -EILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp -CEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred -eEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence 2333322 355678999999999988888889999999975442 44544 23445689999999 78777
Q ss_pred EEee-CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC-CCeEEEecC
Q 010051 161 ASLS-SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD-GSFLLVPAG 238 (519)
Q Consensus 161 ~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~-g~~l~~~~~ 238 (519)
++.+ .++.|++|+... ... ..+...+... ......-..+..++++|+ +..+++...
T Consensus 159 v~d~~~~~~I~~~~~~g-~~~----------~~~~~~g~~~-----------~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 159 VSDGYCNSRIVQFSPSG-KFV----------TQWGEESSGS-----------SPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp EEECSSCCEEEEECTTS-CEE----------EEECEECCSS-----------SCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCeEEEEcCCC-CEE----------EEeccCCCCC-----------CCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 7776 689999999433 211 1110000000 000011134678999999 555555444
Q ss_pred CcceeeeecccceEEEEeccCCCcccccC--CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeC
Q 010051 239 SYKISSMSESINSAYIFSRKDLSRPALQL--PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDT 316 (519)
Q Consensus 239 ~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~ 316 (519)
. +.|++|+..+. ..+..+ ..+...+..++|+| +..+... | +..++...+..|++|+.
T Consensus 217 ~----------~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~---g------~~~v~~~~~~~v~~~~~ 275 (329)
T 3fvz_A 217 N----------GRIQCFKTDTK-EFVREIKHASFGRNVFAISYIP-GFLFAVN---G------KPYFGDQEPVQGFVMNF 275 (329)
T ss_dssp T----------TEEEEEETTTC-CEEEEECCTTTTTCEEEEEEET-TEEEEEE---C------CCCTTCSCCCCEEEEET
T ss_pred C----------CEEEEEECCCC-cEEEEEeccccCCCcceeeecC-CEEEEeC---C------CEEeccCCCcEEEEEEc
Confidence 4 68999998633 223232 34566788999999 4222211 1 12233334568999999
Q ss_pred CCCCceEEEe---ccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 317 ESVPPIAILA---GLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 317 ~~~~~~~~~~---~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
.+++.+..+. . +...+..++++|+|.++++...++.|++|++...
T Consensus 276 ~~g~~~~~~~~~~~-~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 276 SSGEIIDVFKPVRK-HFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp TTCCEEEEECCSSS-CCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCCeEEEEEcCCCC-ccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 9999888874 3 6677999999999988888888999999998753
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=6.5e-17 Score=162.75 Aligned_cols=282 Identities=10% Similarity=-0.003 Sum_probs=171.8
Q ss_pred ecCCCCCEEEEEEecCCCEEEEE--cCCCcEEEEEecCCccccccccccccccccccCccee---------EEEEc--cC
Q 010051 9 NWHDTKPVLTLDFHPISGLLATG--GADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAIN---------ILRFS--PC 75 (519)
Q Consensus 9 ~~~h~~~V~~~~~sp~~~~la~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~ 75 (519)
+.+|...|..++|++++-++++. +.++...||....+.....+ ..+...+. ...|+ |+
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~SPD 89 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESA---------LPAPWNVRNRVFEYSGFPWAGVPRPA 89 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEES---------SCTTCCBCCCGGGTCCCCEEEECCSS
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCccee---------CCCCccccccccccCCccceeeeecC
Confidence 45788999999999887677776 56889999997544333322 22222222 33333 55
Q ss_pred CCe-----------EEEEEcc--c-CCCcccceeeecccc-----CCCCeEEEEEcCCCCEEEEEeCC----------Ce
Q 010051 76 GGE-----------LIIWKLH--T-TETGQAWKVLKNLSF-----HRKDVLDLQWSTDGAFLLSGSVD----------NS 126 (519)
Q Consensus 76 ~~~-----------i~vw~~~--~-~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d----------g~ 126 (519)
++. |.++++. . + ....+.. |...+..++|+|||+.|++++.+ ..
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~-------~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGA-------VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCC-------CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCC-------CCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 444 3344433 1 2 1222333 56678999999999999998877 58
Q ss_pred EEEEEcCC------CceEEEec-ccccCeEEEEEcCCCCeEEEeeCC--------CeEEEEecC-CCCccccccccceee
Q 010051 127 CIIWDVNK------GSVLQILD-AHFHYVQGVAWDPLSKYVASLSSD--------RTCRIYANR-PTKSKGVEKMNYVCQ 190 (519)
Q Consensus 127 i~vwd~~~------~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~-~~~~~~~~~~~~~~~ 190 (519)
|++||+.+ +.. ..+. .+...+..++|+|||++|+.++.+ ..|.+||+. ++.... ..
T Consensus 163 i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~-------~~ 234 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD-------TR 234 (662)
T ss_dssp EEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE-------EE
T ss_pred EEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc-------cE
Confidence 99999987 554 4455 555778889999999999887755 379999987 341100 00
Q ss_pred EEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCC
Q 010051 191 HVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGA 270 (519)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~ 270 (519)
.. . ..+...+..+.|+|||++++++..++ ...+++|+.... ........+
T Consensus 235 ~l-------------------~--~~~~~~~~~~~~spdg~l~~~~~~~~--------~~~l~~~~~~~~-~~~~l~~~~ 284 (662)
T 3azo_A 235 TL-------------------L--GGPEEAIAQAEWAPDGSLIVATDRTG--------WWNLHRVDPATG-AATQLCRRE 284 (662)
T ss_dssp EE-------------------E--EETTBCEEEEEECTTSCEEEEECTTS--------SCEEEEECTTTC-CEEESSCCS
T ss_pred Ee-------------------C--CCCCceEcceEECCCCeEEEEECCCC--------CeEEEEEECCCC-ceeeccccc
Confidence 00 0 01134577899999999665554431 126777776432 222222222
Q ss_pred CCC--------eEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEE--eCCCCCceEEEeccccccEEEE-EEc
Q 010051 271 SKP--------VVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIY--DTESVPPIAILAGLHYAAITDI-AWS 339 (519)
Q Consensus 271 ~~~--------v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vw--d~~~~~~~~~~~~~~~~~i~~~-~~s 339 (519)
... +..++|+|++ ++++++.. +.++|| |+.+++ +..+.. |...+..+ +++
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~----------------~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~-~~~~~~~~~s~~ 345 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANG----------------LIAVVHGK-GAAVLGILDPESGE-LVDAAG-PWTEWAATLTVS 345 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTS----------------CEEEEEBS-SSCEEEEEETTTTE-EEECCS-SCCEEEEEEEEE
T ss_pred ccccCccccccCceEeEeCCC----------------EEEEEEEc-CccEEEEEECCCCc-EEEecC-CCCeEEEEEecC
Confidence 211 3456677766 45666666 777787 665555 566666 67777776 554
Q ss_pred CCCCEEEEEeCCCcEEEE--EecCCc
Q 010051 340 NNARYLALSSQDGYCTLV--EFENDE 363 (519)
Q Consensus 340 ~~g~~l~~~~~dg~i~vw--d~~~~~ 363 (519)
.+.-++++++.+....+| |+.+++
T Consensus 346 ~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 346 GTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp TTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 443344455555545555 544554
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.78 E-value=7.3e-17 Score=148.62 Aligned_cols=290 Identities=13% Similarity=0.093 Sum_probs=179.0
Q ss_pred cCCCEEEEEc------CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCC-------------------
Q 010051 23 PISGLLATGG------ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGG------------------- 77 (519)
Q Consensus 23 p~~~~la~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------------- 77 (519)
++++++++.. .|+.|++||..+++.+..++. +..+ .++|+|++.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~---------g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~ 81 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT---------AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSD 81 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC---------CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecC---------CCCC--ceEECCCCCEEEEEEecccccccCCCCC
Confidence 3566666543 367999999998887655432 2222 677777753
Q ss_pred eEEEEEcccCCCcccceeeecccc------CCCCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceEEE-ecccccCe
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSF------HRKDVLDLQWSTDGAFLLSGSV--DNSCIIWDVNKGSVLQI-LDAHFHYV 148 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~-~~~h~~~v 148 (519)
.|.+||+.+. +.+..+.. +......++|+|||++|+++.. ++.|.+||+.+++.+.. +... ..
T Consensus 82 ~v~v~d~~t~------~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~ 153 (361)
T 2oiz_A 82 VVEVWDADKL------TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GC 153 (361)
T ss_dssp EEEEEETTTC------CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TE
T ss_pred EEEEEECcCC------cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--Cc
Confidence 3677777654 33333321 2345678999999999998874 58999999999988877 5432 22
Q ss_pred EEEEEcCCC-CeEEEeeCCCeEEEEecCC-CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEE
Q 010051 149 QGVAWDPLS-KYVASLSSDRTCRIYANRP-TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAW 226 (519)
Q Consensus 149 ~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 226 (519)
..+.+.|++ ..+++.+.||.+.+|++.. ++... .... ...+... .....+.+
T Consensus 154 ~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~----------~~~~-------------~~~~~~~---~~~~~~~~ 207 (361)
T 2oiz_A 154 WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVAS----------QSRS-------------KQMFSVK---DDPIFIAP 207 (361)
T ss_dssp EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEE----------EEEC-------------CCCSCTT---TSCBCSCC
T ss_pred ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEee----------eccc-------------cceEcCC---CCceEEEe
Confidence 335677765 6778888999999999865 22110 0000 0000000 01112334
Q ss_pred ccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccc-c--CCC--------CCCCeEEEEEcCCcccccccCCCCcc
Q 010051 227 SPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPAL-Q--LPG--------ASKPVVAVRFCPLAFNLRESNSAGFF 295 (519)
Q Consensus 227 sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~-~--~~~--------~~~~v~~~~~sp~~~~l~~~~~~g~~ 295 (519)
+|++..++..+.+ +.++++|+........ . +.. .......++|+|++..
T Consensus 208 ~~~g~~~~~~~~~----------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~---------- 267 (361)
T 2oiz_A 208 ALDKDKAHFVSYY----------GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR---------- 267 (361)
T ss_dssp EECSSEEEEEBTT----------SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE----------
T ss_pred cccCCEEEEEeCC----------CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe----------
Confidence 6677666665544 4677777643221100 0 000 0011112678887743
Q ss_pred cccceEEEEEec-----------CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 296 KLPYRLIFAIAT-----------LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 296 ~~~~~~~~~~~~-----------d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
++.+.. .+.|.+||+.+++.+..+.. +. +.+++|+|||++|++++. +.|.+||..++.+
T Consensus 268 ------lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l 337 (361)
T 2oiz_A 268 ------MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP 337 (361)
T ss_dssp ------EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC-TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSC
T ss_pred ------EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec-CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc
Confidence 333322 35899999999999999987 55 999999999999998886 9999999998832
Q ss_pred cceeeecCCcccccCCCCcccccCCcc
Q 010051 365 GIPISLSGNKVSKDENKSPLVTKSEDM 391 (519)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~s~~~~ 391 (519)
...-.+... ......++++|+|.
T Consensus 338 ~~~~~i~~~----G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 338 KLLRTIEGA----AEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEEETTS----CSSEEEEEECCCSC
T ss_pred eeeEEeccC----CCCcEEEEecCCCC
Confidence 222222111 23445678888775
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.78 E-value=5.7e-17 Score=151.94 Aligned_cols=257 Identities=11% Similarity=0.009 Sum_probs=161.1
Q ss_pred eeeeccccCCCCeEE-----EEEcCCCCEEEEEeC-CC--eEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC
Q 010051 94 KVLKNLSFHRKDVLD-----LQWSTDGAFLLSGSV-DN--SCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~-----~~~s~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 165 (519)
..+..+..|...... ++|+|||++|+.++. ++ .|++||+.+++.......+...+..+.|+|+++.|+.++.
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 344555556655555 889999999998887 66 4999999999887777767666667789999999999999
Q ss_pred CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceee--EEEEccCCCeEEEecCCcce-
Q 010051 166 DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFR--RLAWSPDGSFLLVPAGSYKI- 242 (519)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~sp~g~~l~~~~~~~~~- 242 (519)
++.|++||+.+++....... ....+. ...++|++++++.......-
T Consensus 101 ~~~l~~~d~~~g~~~~~~~~-------------------------------~~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQV-------------------------------PAEWVGYGTWVANSDCTKLVGIEIRREDW 149 (388)
T ss_dssp TTEEEEEETTTCCEEEEEEC-------------------------------CTTEEEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred CCeEEEEECCCCcceeeeec-------------------------------hhhcccccceeECCCCCeeccccccCccc
Confidence 99999999988753221111 011222 23458999988753211000
Q ss_pred -----------eeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcC-CcccccccCCCCcccccceEEEEEecCCe
Q 010051 243 -----------SSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCP-LAFNLRESNSAGFFKLPYRLIFAIATLNS 310 (519)
Q Consensus 243 -----------~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~~~~~~~~~~~~~~d~~ 310 (519)
.........+++||+.... ...+..+...+..+.|+| +|..++.....+.- .....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~----------~~~~~ 217 (388)
T 3pe7_A 150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHD----------LVDAR 217 (388)
T ss_dssp CCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTT----------TSSCS
T ss_pred ccccccchhhhhhccCCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCC----------CCcce
Confidence 0001122578999987543 333444566789999999 98554322111000 00347
Q ss_pred EEEEeCCCCCceEEEecccc--ccEEEEEEcCCCCEEEEEeCC-C----cEEEEEecCCcccceeeecCCcccccCCCCc
Q 010051 311 LYIYDTESVPPIAILAGLHY--AAITDIAWSNNARYLALSSQD-G----YCTLVEFENDELGIPISLSGNKVSKDENKSP 383 (519)
Q Consensus 311 i~vwd~~~~~~~~~~~~~~~--~~i~~~~~s~~g~~l~~~~~d-g----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
|+++|+..+... .+.. +. ..+..++|||||+.|+..+.+ + .|++||+.+++.......++... .......
T Consensus 218 l~~~d~~~~~~~-~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~-~~~~~~~ 294 (388)
T 3pe7_A 218 MWLINEDGTNMR-KVKT-HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH-LMSNYDG 294 (388)
T ss_dssp EEEEETTSCCCE-ESCC-CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE-EEECTTS
T ss_pred EEEEeCCCCceE-Eeee-CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee-eeecCCC
Confidence 888898766543 3333 33 358889999999987665432 2 39999999886544333333110 0112344
Q ss_pred ccccCCccEEEee
Q 010051 384 LVTKSEDMIIEAS 396 (519)
Q Consensus 384 ~~~s~~~~~l~~~ 396 (519)
+.|+|||..|+..
T Consensus 295 ~~~spdg~~l~~~ 307 (388)
T 3pe7_A 295 SLMVGDGSDAPVD 307 (388)
T ss_dssp SEEEEEECCC---
T ss_pred CeEccCCCcceeE
Confidence 5899999988864
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=1.8e-16 Score=145.10 Aligned_cols=249 Identities=9% Similarity=0.036 Sum_probs=158.8
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCC----CeEEEEecC
Q 010051 100 SFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSD----RTCRIYANR 175 (519)
Q Consensus 100 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~ 175 (519)
..+...+.+++|+++|++++++..++.|++||..+++.......+...+.+++++++++++++...+ +.|.+||..
T Consensus 41 ~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred eccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 3455667899999999977788889999999998887665444566789999999999887777666 689999987
Q ss_pred CCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEE
Q 010051 176 PTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIF 255 (519)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~ 255 (519)
+...... .........+..++++|+|+.+++...... ....+.++.+
T Consensus 121 ~~~~~~~-----------------------------~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~----~~~~~~l~~~ 167 (333)
T 2dg1_A 121 GDNLQDI-----------------------------IEDLSTAYCIDDMVFDSKGGFYFTDFRGYS----TNPLGGVYYV 167 (333)
T ss_dssp SCSCEEE-----------------------------ECSSSSCCCEEEEEECTTSCEEEEECCCBT----TBCCEEEEEE
T ss_pred CCEEEEE-----------------------------EccCccCCcccceEECCCCCEEEEeccccc----cCCCceEEEE
Confidence 7542100 000011245778999999987776543100 0011356666
Q ss_pred eccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCC-CCceEEEe-----c-c
Q 010051 256 SRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTES-VPPIAILA-----G-L 328 (519)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~~~~-----~-~ 328 (519)
+.... ....+......+..++|+|++..+ +++...++.|++|++.+ +..+..+. . .
T Consensus 168 ~~~~~--~~~~~~~~~~~~~~i~~~~dg~~l---------------~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~ 230 (333)
T 2dg1_A 168 SPDFR--TVTPIIQNISVANGIALSTDEKVL---------------WVTETTANRLHRIALEDDGVTIQPFGATIPYYFT 230 (333)
T ss_dssp CTTSC--CEEEEEEEESSEEEEEECTTSSEE---------------EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC
T ss_pred eCCCC--EEEEeecCCCcccceEECCCCCEE---------------EEEeCCCCeEEEEEecCCCcCcccccceEEEecC
Confidence 55321 122222223457889999998432 34445578999999864 44332211 1 0
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCC
Q 010051 329 HYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTND 399 (519)
Q Consensus 329 ~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d 399 (519)
....+..++++++|+++++...++.|.+|+.. ++....+..+.........+..++|++|+..|..++.+
T Consensus 231 ~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 231 GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp SSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 01367889999999988888788999999974 33222332221100011156789999998666655544
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=5.1e-16 Score=157.02 Aligned_cols=249 Identities=10% Similarity=0.023 Sum_probs=165.3
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCC-----cEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 12 DTKPVLTLDFHPISGLLATGGADY-----DIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
|...+.+++|||||++||.+..++ .|+|||+.+++....
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~------------------------------------ 166 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD------------------------------------ 166 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE------------------------------------
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc------------------------------------
Confidence 445688999999999998765433 788888887763220
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCe----------------EEEEEcCCCce----EEEeccccc
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNS----------------CIIWDVNKGSV----LQILDAHFH 146 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~----------------i~vwd~~~~~~----~~~~~~h~~ 146 (519)
.+ ....+..++|+|||+.|+.++.++. |++|++.+++. +.....|..
T Consensus 167 -----------~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~ 233 (710)
T 2xdw_A 167 -----------VL--ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPK 233 (710)
T ss_dssp -----------EE--EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred -----------cc--cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCe
Confidence 00 0011456788888888887777655 99999988762 222233555
Q ss_pred CeEEEEEcCCCCeEEEeeC-----CCeEEEEecCC------CCccccccccceeeEEEeccCcccccCCccccceeeecC
Q 010051 147 YVQGVAWDPLSKYVASLSS-----DRTCRIYANRP------TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDE 215 (519)
Q Consensus 147 ~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (519)
.+..+.|+|+|++|+..+. +..|.+||+.+ +... ...+.
T Consensus 234 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~---------~~~l~--------------------- 283 (710)
T 2xdw_A 234 WMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK---------WVKLI--------------------- 283 (710)
T ss_dssp CEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC---------CEEEE---------------------
T ss_pred EEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc---------eEEee---------------------
Confidence 6889999999999887765 56899999875 2100 00000
Q ss_pred CCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc-ccccCCCCCC--CeEEEEEcCCcccccccCCC
Q 010051 216 TLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-PALQLPGASK--PVVAVRFCPLAFNLRESNSA 292 (519)
Q Consensus 216 ~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-~~~~~~~~~~--~v~~~~~sp~~~~l~~~~~~ 292 (519)
.....+. ..|+|+|+.|++.+... .....|++|++..... ....+..+.. .+..+.|++++
T Consensus 284 ~~~~~~~-~~~s~dg~~l~~~s~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------- 347 (710)
T 2xdw_A 284 DNFEGEY-DYVTNEGTVFTFKTNRH------SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN--------- 347 (710)
T ss_dssp CSSSSCE-EEEEEETTEEEEEECTT------CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT---------
T ss_pred CCCCcEE-EEEeccCCEEEEEECCC------CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC---------
Confidence 0111122 25889999888876542 1235789999875431 1223333333 67788888665
Q ss_pred CcccccceEEEEEecCC--eEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEE-e---CCCcEEEEEecCCc
Q 010051 293 GFFKLPYRLIFAIATLN--SLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALS-S---QDGYCTLVEFENDE 363 (519)
Q Consensus 293 g~~~~~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~---~dg~i~vwd~~~~~ 363 (519)
.++++...++ .|++|++.+++.+..+.. +.+.+..++++|++..|+.. + ..+.|++||+.+++
T Consensus 348 -------~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 348 -------FLVLCYLHDVKNTLQLHDLATGALLKIFPL-EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -------EEEEEEEETTEEEEEEEETTTCCEEEEECC-CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -------EEEEEEEECCEEEEEEEECCCCCEEEecCC-CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4566666676 567788877887777777 67789999999999766543 2 23789999998775
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=4.4e-15 Score=133.34 Aligned_cols=247 Identities=10% Similarity=0.010 Sum_probs=164.5
Q ss_pred CCeeEEecCCCCCEEEEEEecCCC-EEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEE
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISG-LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELII 81 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~-~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~v 81 (519)
+..+.....+.....+++|+|+|+ +++++..++.|++|+..++ ...
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~------------------------------- 63 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSP------------------------------- 63 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEE-------------------------------
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEE-------------------------------
Confidence 445566667778899999999998 7788888899999987654 110
Q ss_pred EEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEeccc----ccCeEEEEEcCCC
Q 010051 82 WKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAH----FHYVQGVAWDPLS 157 (519)
Q Consensus 82 w~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~ 157 (519)
| ..+...+.+++++++|+++++...++.|.+||..+++........ ...+..++++|+|
T Consensus 64 ~-----------------~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G 126 (296)
T 3e5z_A 64 E-----------------MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG 126 (296)
T ss_dssp E-----------------ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS
T ss_pred E-----------------ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC
Confidence 1 113456889999999998777766789999999888765433221 1345679999999
Q ss_pred CeEEEe----eC-------------CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcce
Q 010051 158 KYVASL----SS-------------DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSF 220 (519)
Q Consensus 158 ~~l~~~----~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (519)
+++++. +. .+.|..++.. ++... .......
T Consensus 127 ~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~--------------------------------~~~~~~~ 173 (296)
T 3e5z_A 127 SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA--------------------------------PIRDRVK 173 (296)
T ss_dssp CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE--------------------------------EECCCSS
T ss_pred CEEEECCccccccccccccccccCCCcEEEEECCC-CCEEE--------------------------------eecCCCC
Confidence 988873 21 2344444443 21100 0011234
Q ss_pred eeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcc---cccCCCCCCCeEEEEEcCCcccccccCCCCcccc
Q 010051 221 FRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRP---ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKL 297 (519)
Q Consensus 221 i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~---~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~ 297 (519)
...++|+|+|+.+++.+.. +.|++|++...... ...+..+...+..++++++|
T Consensus 174 ~~gi~~s~dg~~lv~~~~~----------~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G-------------- 229 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGD----------NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG-------------- 229 (296)
T ss_dssp EEEEEECTTSCEEEEETTT----------TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS--------------
T ss_pred CccEEECCCCCEEEEeCCC----------CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC--------------
Confidence 5689999999998554444 58888887622221 11122344456678888887
Q ss_pred cceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEE-cCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 298 PYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAW-SNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 298 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~-s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
+++++. ++.|.+|+.. ++.+..+.. +.. +++++| +|+++.|++++.+ .+..++..+..+
T Consensus 230 --~l~v~~--~~~v~~~~~~-g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 230 --LIWASA--GDGVHVLTPD-GDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp --CEEEEE--TTEEEEECTT-SCEEEEEEC-SSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred --CEEEEc--CCeEEEECCC-CCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 333333 6789999986 777777776 556 899999 6899989888875 344445554433
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=2.4e-16 Score=158.62 Aligned_cols=243 Identities=11% Similarity=0.000 Sum_probs=160.1
Q ss_pred ccccCcceeEEEEccC-----------CCeEEEEEcccCCCcccceeeeccccCCCCeE---------EEEEc--CCCCE
Q 010051 60 LSYHGSAINILRFSPC-----------GGELIIWKLHTTETGQAWKVLKNLSFHRKDVL---------DLQWS--TDGAF 117 (519)
Q Consensus 60 ~~~~~~~v~~~~~~~~-----------~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~ 117 (519)
+..|...+..++|+++ ++...||....+ .....+..|...+. ...|+ |||++
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD------GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT------SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC------CCcceeCCCCccccccccccCCccceeeeecCCCe
Confidence 4456666666666654 467888886333 12344555655555 56665 99998
Q ss_pred -EEEEeC-CCeEEEEEcC--C-CceEEEecc-----cccCeEEEEEcCCCCeEEEeeCC----------CeEEEEecCC-
Q 010051 118 -LLSGSV-DNSCIIWDVN--K-GSVLQILDA-----HFHYVQGVAWDPLSKYVASLSSD----------RTCRIYANRP- 176 (519)
Q Consensus 118 -l~~~~~-dg~i~vwd~~--~-~~~~~~~~~-----h~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~- 176 (519)
|+.++. +..|++|++. . +. ...+.. |...+..++|+|||+.|++++.+ ..|.+||+.+
T Consensus 93 ~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 93 LLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp EEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred EEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 776654 5678888875 3 43 445555 66788999999999999988877 5899999876
Q ss_pred -----CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccce
Q 010051 177 -----TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINS 251 (519)
Q Consensus 177 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~ 251 (519)
++...+. ......+..++|||||++|+.++.+.... ......
T Consensus 172 ~~~~~~~~~~l~-------------------------------~~~~~~~~~~~~SpDG~~la~~~~~~~~~--~~~~~~ 218 (662)
T 3azo_A 172 AAADRSAVRELS-------------------------------DDAHRFVTGPRLSPDGRQAVWLAWDHPRM--PWEGTE 218 (662)
T ss_dssp TTTCGGGSEESS-------------------------------CSCSSEECCCEECTTSSEEEEEEECTTCC--TTTCEE
T ss_pred ccccCCceeEEE-------------------------------ecCCCcccCceECCCCCEEEEEECCCCCC--CCCCcE
Confidence 3211000 01124566899999999999876432100 001247
Q ss_pred EEEEeccCCC---cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC--eEEEEeCCCCCceEEEe
Q 010051 252 AYIFSRKDLS---RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN--SLYIYDTESVPPIAILA 326 (519)
Q Consensus 252 i~i~~~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~ 326 (519)
|++|++...+ .......++...+..+.|+|||+ +++++..++ .|++||+.+++....+.
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~----------------l~~~~~~~~~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS----------------LIVATDRTGWWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC----------------EEEEECTTSSCEEEEECTTTCCEEESSC
T ss_pred EEEEEECCCCcccccEEeCCCCCceEcceEECCCCe----------------EEEEECCCCCeEEEEEECCCCceeeccc
Confidence 9999997322 33333344567899999999995 345555555 78888877776544333
Q ss_pred cccccc--------EEEEEEcCCCCEEEEEeCCCcEEEEEec
Q 010051 327 GLHYAA--------ITDIAWSNNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 327 ~~~~~~--------i~~~~~s~~g~~l~~~~~dg~i~vwd~~ 360 (519)
. +... +..++|+|+++++++++. +.++||.++
T Consensus 283 ~-~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 283 R-EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp C-SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred c-cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 2 3222 567899999999999998 999999665
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.74 E-value=1.3e-14 Score=132.64 Aligned_cols=191 Identities=13% Similarity=0.077 Sum_probs=125.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCceEEEec--ccccCeEEEEEcCCCCeEEEeeC------CCeE
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVD----NSCIIWDVNKGSVLQILD--AHFHYVQGVAWDPLSKYVASLSS------DRTC 169 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~------dg~i 169 (519)
+...+.+++|+++|+++++...+ +.|.+||..++.....+. .+...+.+++++|+++++++... .+.|
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l 164 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGV 164 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceE
Confidence 45679999999999877777666 689999998877553332 23457899999999987776653 2455
Q ss_pred EEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeeccc
Q 010051 170 RIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESI 249 (519)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~ 249 (519)
..++..+++.... . .....+..++|+|+|++++++... .
T Consensus 165 ~~~~~~~~~~~~~-----------------------------~---~~~~~~~~i~~~~dg~~l~v~~~~---------~ 203 (333)
T 2dg1_A 165 YYVSPDFRTVTPI-----------------------------I---QNISVANGIALSTDEKVLWVTETT---------A 203 (333)
T ss_dssp EEECTTSCCEEEE-----------------------------E---EEESSEEEEEECTTSSEEEEEEGG---------G
T ss_pred EEEeCCCCEEEEe-----------------------------e---cCCCcccceEECCCCCEEEEEeCC---------C
Confidence 5555543321100 0 001235689999999977665322 2
Q ss_pred ceEEEEeccCCCccc--------ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCc
Q 010051 250 NSAYIFSRKDLSRPA--------LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPP 321 (519)
Q Consensus 250 ~~i~i~~~~~~~~~~--------~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~ 321 (519)
+.|++|+........ ..+.++ ..+..++++++| +++++...++.|.+||. .++.
T Consensus 204 ~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G----------------~l~v~~~~~~~v~~~d~-~g~~ 265 (333)
T 2dg1_A 204 NRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDD----------------NLYVAMYGQGRVLVFNK-RGYP 265 (333)
T ss_dssp TEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTC----------------CEEEEEETTTEEEEECT-TSCE
T ss_pred CeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCC----------------CEEEEEcCCCEEEEECC-CCCE
Confidence 578889885322211 112222 356778888887 44555566789999998 4666
Q ss_pred eEEEeccccc------cEEEEEEcCCCCEEEEEeCCC
Q 010051 322 IAILAGLHYA------AITDIAWSNNARYLALSSQDG 352 (519)
Q Consensus 322 ~~~~~~~~~~------~i~~~~~s~~g~~l~~~~~dg 352 (519)
+..+.. +.. .+.+++|+|+++.|+.++.++
T Consensus 266 ~~~~~~-~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 266 IGQILI-PGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEEEC-TTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EEEEEc-CCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 666654 332 689999999987777666553
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=7.7e-14 Score=125.43 Aligned_cols=280 Identities=11% Similarity=0.027 Sum_probs=183.9
Q ss_pred CCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCc
Q 010051 11 HDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETG 90 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~ 90 (519)
.+...+.+++++++|+++++...++.|.+||.. ++... +.
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~--------------------------------~~------- 51 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE--------------------------------YP------- 51 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE--------------------------------EE-------
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE--------------------------------ec-------
Confidence 345789999999999988877667889999866 43110 00
Q ss_pred ccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceE-EEecccccCeEEEEEcCCCCeEEEeeCCCeE
Q 010051 91 QAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVL-QILDAHFHYVQGVAWDPLSKYVASLSSDRTC 169 (519)
Q Consensus 91 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 169 (519)
+..+...+.+++++++|..+++...++.|..||.. ++.. ..+......+.+++++++++++++...++.|
T Consensus 52 --------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 122 (299)
T 2z2n_A 52 --------LPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRI 122 (299)
T ss_dssp --------CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred --------CCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceE
Confidence 01123568899999999877777668899999986 4332 1222344578999999999887777778899
Q ss_pred EEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeeccc
Q 010051 170 RIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESI 249 (519)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~ 249 (519)
.+||. .++... +........+..++++++|..+++....
T Consensus 123 ~~~d~-~g~~~~------------------------------~~~~~~~~~~~~i~~~~~g~l~v~~~~~---------- 161 (299)
T 2z2n_A 123 GRITD-DGKIRE------------------------------YELPNKGSYPSFITLGSDNALWFTENQN---------- 161 (299)
T ss_dssp EEECT-TCCEEE------------------------------EECSSTTCCEEEEEECTTSCEEEEETTT----------
T ss_pred EEECC-CCCEEE------------------------------ecCCCCCCCCceEEEcCCCCEEEEeCCC----------
Confidence 99987 432110 0000112356789999999877765544
Q ss_pred ceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEE-Eecc
Q 010051 250 NSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAI-LAGL 328 (519)
Q Consensus 250 ~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~ 328 (519)
+.+..|+. +..............+..++++++| ++.++...++.|.+||. ++..... +..
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g----------------~l~v~~~~~~~i~~~~~-~g~~~~~~~~~- 222 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTPASGPVGITKGNDD----------------ALWFVEIIGNKIGRITT-SGEITEFKIPT- 222 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS----------------SEEEEETTTTEEEEECT-TCCEEEEECSS-
T ss_pred CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCC----------------CEEEEccCCceEEEECC-CCcEEEEECCC-
Confidence 46777776 3221111233344567889999987 33444445678999998 6664332 222
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeecC
Q 010051 329 HYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAET 406 (519)
Q Consensus 329 ~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~ 406 (519)
+...+.+++++++|+++++...++.|.+|+. .+.. ..+..+.. ...+..+++ ++|.+.++...++++..+.
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~----~~~~~~i~~-~~g~l~v~~~~~~l~~~~~ 293 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQIK----SAEPHGICF-DGETIWFAMECDKIGKLTL 293 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEECSSS----SCCEEEEEE-CSSCEEEEETTTEEEEEEE
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeCCCC----CCccceEEe-cCCCEEEEecCCcEEEEEc
Confidence 4567899999999997777667889999998 3322 22222221 245677888 8888777766666665543
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=1.8e-15 Score=135.90 Aligned_cols=252 Identities=10% Similarity=-0.014 Sum_probs=168.0
Q ss_pred cCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCc
Q 010051 101 FHRKDVLDLQWSTDGA-FLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKS 179 (519)
Q Consensus 101 ~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 179 (519)
.+.....+++|+|+|+ .++++..++.|..||..++ ...+..+...+.+++++++++++++...++.|.+||..+++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 3556688999999998 7778888999999999877 566666778899999999999887777778999999876642
Q ss_pred cccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcce-------eeeecccceE
Q 010051 180 KGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKI-------SSMSESINSA 252 (519)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~-------~~~~~~~~~i 252 (519)
...... ........+..++++|+|+.+++....+.. .......+.+
T Consensus 103 ~~~~~~---------------------------~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 103 ESIADS---------------------------FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp EEEECE---------------------------ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred EEEeec---------------------------cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 211000 000011235679999999988763210000 0000012356
Q ss_pred EEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC-CCCc---eEEEecc
Q 010051 253 YIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE-SVPP---IAILAGL 328 (519)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~-~~~~---~~~~~~~ 328 (519)
+.++.. . ....+..+......++|+|++ +.+++...++.|++|++. ++.. ...+ ..
T Consensus 156 ~~~~~~--g-~~~~~~~~~~~~~gi~~s~dg----------------~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~ 215 (296)
T 3e5z_A 156 FRLAPD--G-TLSAPIRDRVKPNGLAFLPSG----------------NLLVSDTGDNATHRYCLNARGETEYQGVHF-TV 215 (296)
T ss_dssp EEECTT--S-CEEEEECCCSSEEEEEECTTS----------------CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC
T ss_pred EEECCC--C-CEEEeecCCCCCccEEECCCC----------------CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC
Confidence 666553 2 223334455677899999998 445555667899999987 4554 3344 22
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccc-cCCccEEEeecCCceeeecCC
Q 010051 329 HYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVT-KSEDMIIEASTNDKLVTAETK 407 (519)
Q Consensus 329 ~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~l~~~~~d~~i~~~~~ 407 (519)
+...+..++++++|+++++. ++.|.+|+.. ++....+.. + .. +.+++| +|++..|..++.+++......
T Consensus 216 ~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~--~----~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~ 285 (296)
T 3e5z_A 216 EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT--P----QT-TSNLCFGGPEGRTLYMTVSTEFWSIETN 285 (296)
T ss_dssp SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC--S----SC-CCEEEEESTTSCEEEEEETTEEEEEECS
T ss_pred CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC--C----CC-ceeEEEECCCCCEEEEEcCCeEEEEEcc
Confidence 55667889999999877666 8899999976 332222221 1 23 788889 689998888888887766655
Q ss_pred CCCc
Q 010051 408 EPDK 411 (519)
Q Consensus 408 ~~~~ 411 (519)
.+.+
T Consensus 286 ~~~~ 289 (296)
T 3e5z_A 286 VRGL 289 (296)
T ss_dssp CCBC
T ss_pred cccc
Confidence 4443
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=5.3e-15 Score=136.20 Aligned_cols=259 Identities=16% Similarity=0.132 Sum_probs=166.4
Q ss_pred CCCCEEEEEEecCCCEEEEEc---------CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCe----
Q 010051 12 DTKPVLTLDFHPISGLLATGG---------ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGE---- 78 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---- 78 (519)
....+..++| ||++||... .++.|++||+.+++... + ..+..++|+|++..
T Consensus 13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~----------l----~~~~~~~~SpDg~~la~~ 76 (347)
T 2gop_A 13 KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF----------I----ENATMPRISPDGKKIAFM 76 (347)
T ss_dssp CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE----------E----ESCEEEEECTTSSEEEEE
T ss_pred eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE----------c----ccCCCeEECCCCCEEEEE
Confidence 3456788888 899887642 25679999998876321 1 34667788887533
Q ss_pred ----------EEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC------------------------
Q 010051 79 ----------LIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD------------------------ 124 (519)
Q Consensus 79 ----------i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------------------------ 124 (519)
|.+|++.++ +... +..+.. +..++|+|||+.|+.++.+
T Consensus 77 ~~~~~~~~~~l~~~~~~~g------~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETL------SSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp EEETTTTEEEEEEEETTTT------EEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC--------
T ss_pred EeccCCCcceEEEEECCCC------ceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 445555443 2222 222233 8999999999999887642
Q ss_pred ---CeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCC-------eEEEEecCCCCccccccccceeeEEEe
Q 010051 125 ---NSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDR-------TCRIYANRPTKSKGVEKMNYVCQHVIT 194 (519)
Q Consensus 125 ---g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~ 194 (519)
..|++||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...+|.+.+++.. .
T Consensus 149 ~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~----------~--- 212 (347)
T 2gop_A 149 GEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE----------K--- 212 (347)
T ss_dssp -CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE----------E---
T ss_pred CccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE----------E---
Confidence 5799999998877455544 3 78899999999 777776542 3445544322110 0
Q ss_pred ccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCe
Q 010051 195 KAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPV 274 (519)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v 274 (519)
+.. . ..+.. ++|+|++|++.+...... ......+++|+ ..........+...+
T Consensus 213 ----------------l~~---~-~~~~~--~spdg~~l~~~~~~~~~~--~~~~~~l~~~d---~~~~~~l~~~~~~~~ 265 (347)
T 2gop_A 213 ----------------MFE---K-VSFYA--VDSDGERILLYGKPEKKY--MSEHNKLYIYD---GKEVMGILDEVDRGV 265 (347)
T ss_dssp ----------------EEE---E-ESEEE--EEECSSCEEEEECCSSSC--CCSSCEEEEEC---SSCEEESSTTCCSEE
T ss_pred ----------------ecc---C-cceee--ECCCCCEEEEEEccccCC--ccccceEEEEC---CCceEeccccCCccc
Confidence 000 0 11223 399999998876442100 01124788888 233334445566778
Q ss_pred EE-EEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCc
Q 010051 275 VA-VRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGY 353 (519)
Q Consensus 275 ~~-~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~ 353 (519)
.. +.|+ ++ +++++..++.+++| +.+++.. .+.. +...|.+++|+| .++++++.++.
T Consensus 266 ~~~~~~s-dg-----------------~~~~~~~~~~~~l~-~~~g~~~-~~~~-~~~~v~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 266 GQAKIKD-GK-----------------VYFTLFEEGSVNLY-IWDGEIK-PIAK-GRHWIMGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp EEEEEET-TE-----------------EEEEEEETTEEEEE-EESSSEE-EEEC-SSSEEEEEEESS--SEEEEEECSSS
T ss_pred CCccEEc-Cc-----------------EEEEEecCCcEEEE-EcCCceE-EEec-CCCeEEeeeeeC--cEEEEEcCCCC
Confidence 76 8898 75 25677778889999 8766553 4444 577899999999 67777777776
Q ss_pred E-EEEEec
Q 010051 354 C-TLVEFE 360 (519)
Q Consensus 354 i-~vwd~~ 360 (519)
. .||.++
T Consensus 323 ~~~l~~~~ 330 (347)
T 2gop_A 323 LRELFTWD 330 (347)
T ss_dssp CCEEEEES
T ss_pred hHHheEeC
Confidence 5 888886
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=1.1e-14 Score=130.10 Aligned_cols=240 Identities=10% Similarity=0.099 Sum_probs=161.3
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEec------ccccCeEEEEE-cCCCCeEEEeeC-CCeEEEE
Q 010051 101 FHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILD------AHFHYVQGVAW-DPLSKYVASLSS-DRTCRIY 172 (519)
Q Consensus 101 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~-~~~~~~l~~~~~-dg~i~iw 172 (519)
++...+.+++++++++++++...++.|.+||.. ++.+..+. .+...+..+++ .++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999988888889999999986 66665553 24457889999 466666666543 8899999
Q ss_pred ecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceE
Q 010051 173 ANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSA 252 (519)
Q Consensus 173 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i 252 (519)
|.. ++.. ..+ .......+..++++|+|+.+++.... +.|
T Consensus 106 d~~-g~~~----------~~~--------------------~~~~~~~~~~i~~~~~g~l~v~~~~~----------~~i 144 (286)
T 1q7f_A 106 NQY-GQFV----------RKF--------------------GATILQHPRGVTVDNKGRIIVVECKV----------MRV 144 (286)
T ss_dssp CTT-SCEE----------EEE--------------------CTTTCSCEEEEEECTTSCEEEEETTT----------TEE
T ss_pred CCC-CcEE----------EEe--------------------cCccCCCceEEEEeCCCCEEEEECCC----------CEE
Confidence 943 3210 000 00112346789999999877765544 578
Q ss_pred EEEeccCCCcccccC--CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec-cc
Q 010051 253 YIFSRKDLSRPALQL--PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG-LH 329 (519)
Q Consensus 253 ~i~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~ 329 (519)
++|+... .....+ ..+...+..++++|+| +++++...++.|++||.. ++.+..+.. .+
T Consensus 145 ~~~~~~g--~~~~~~~~~~~~~~p~~i~~~~~g----------------~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~ 205 (286)
T 1q7f_A 145 IIFDQNG--NVLHKFGCSKHLEFPNGVVVNDKQ----------------EIFISDNRAHCVKVFNYE-GQYLRQIGGEGI 205 (286)
T ss_dssp EEECTTS--CEEEEEECTTTCSSEEEEEECSSS----------------EEEEEEGGGTEEEEEETT-CCEEEEESCTTT
T ss_pred EEEcCCC--CEEEEeCCCCccCCcEEEEECCCC----------------CEEEEECCCCEEEEEcCC-CCEEEEEccCCc
Confidence 8888542 222222 2344568899999988 556666678899999974 556666644 12
Q ss_pred cccEEEEEEcCCCCEEEEEeCCC-cEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceeeecC
Q 010051 330 YAAITDIAWSNNARYLALSSQDG-YCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAET 406 (519)
Q Consensus 330 ~~~i~~~~~s~~g~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~ 406 (519)
...+..++++++|+++++...++ .|.+|+... +....+..... ...+..++++|+|.++++..+..+.+|..
T Consensus 206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~~~~~~----~~~~~~i~~~~~g~l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 206 TNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESKVK----HAQCFDVALMDDGSVVLASKDYRLYIYRY 278 (286)
T ss_dssp SCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEEEESSC----CSCEEEEEEETTTEEEEEETTTEEEEEEC
T ss_pred cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEEcccCC----CCcceeEEECCCCcEEEECCCCeEEEEEc
Confidence 35789999999999888887776 999999543 32222222111 12356799999998887755433446754
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=6.3e-15 Score=135.69 Aligned_cols=274 Identities=9% Similarity=0.032 Sum_probs=169.2
Q ss_pred EEEEecCCCEEEEEc----------CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC-----------
Q 010051 18 TLDFHPISGLLATGG----------ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG----------- 76 (519)
Q Consensus 18 ~~~~sp~~~~la~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------- 76 (519)
.++|+|||++|++++ .++.|.+||..+++....+..... ...+......++|+|++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~---~~~~g~~p~~i~~spdg~~l~v~n~~~~ 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK---RVQGLNYDGLFRQTTDGKFIVLQNASPA 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT---BCCBCCCGGGEEECTTSSEEEEEEESSS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc---ccccCCCcceEEECCCCCEEEEECCCCC
Confidence 899999999998876 267899999998887766543210 00122334556666664
Q ss_pred CeEEEEEcccCCCcccceeeec-cccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCC-CceEEE------ecccccC
Q 010051 77 GELIIWKLHTTETGQAWKVLKN-LSFHRKDVLDLQWSTDG-AFLLSGSVDNSCIIWDVNK-GSVLQI------LDAHFHY 147 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~-~~~~~~------~~~h~~~ 147 (519)
+.|.+||+.+. +.+.. +.. .....+.+.|++ ..+++.+.||.+.+|++.. ++.... +..+..+
T Consensus 131 ~~v~v~d~~~~------~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~ 202 (361)
T 2oiz_A 131 TSIGIVDVAKG------DYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP 202 (361)
T ss_dssp EEEEEEETTTT------EEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC
T ss_pred CeEEEEECCCC------cEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc
Confidence 45677777665 44444 332 122335677876 6778888999999999865 554421 2222222
Q ss_pred eEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 148 VQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 148 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
+ .+.+++++..++..+.++.+.++|+.......... +...... .......+.....++|+
T Consensus 203 ~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~--------~~~~~~~-----------~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 203 I-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGP--------WSLLNDE-----------DKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp B-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEE--------EESCCHH-----------HHHTTCEECCSSCEEEE
T ss_pred e-EEEecccCCEEEEEeCCCeEEEEEecCCCceeccc--------ccccCcc-----------ccccccccCCeeEEEEe
Confidence 2 23345677777777889999999987543211000 0000000 00000001112237899
Q ss_pred cCCCeEEEecC-CcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe
Q 010051 228 PDGSFLLVPAG-SYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA 306 (519)
Q Consensus 228 p~g~~l~~~~~-~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~ 306 (519)
|++++++++.. +..........+.+.+||..+. +.+..+..+. +..++|+|+|+ ++++++
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~--p~~ia~spdg~----------------~l~v~n 323 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD--ALSMTIDQQRN----------------LMLTLD 323 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT--CCEEEEETTTT----------------EEEEEC
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC--eeEEEECCCCC----------------EEEEeC
Confidence 99988887643 1000000011258999998764 4455555555 89999999994 455555
Q ss_pred cCCeEEEEeCCCC--CceEEEeccccccEEEEEEcCCCC
Q 010051 307 TLNSLYIYDTESV--PPIAILAGLHYAAITDIAWSNNAR 343 (519)
Q Consensus 307 ~d~~i~vwd~~~~--~~~~~~~~~~~~~i~~~~~s~~g~ 343 (519)
. +.|.+||+.++ +.+..+.. +......++++|+|+
T Consensus 324 ~-~~v~v~D~~t~~l~~~~~i~~-~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 324 G-GNVNVYDISQPEPKLLRTIEG-AAEASLQVQFHPVGG 360 (361)
T ss_dssp S-SCEEEEECSSSSCEEEEEETT-SCSSEEEEEECCCSC
T ss_pred C-CeEEEEECCCCcceeeEEecc-CCCCcEEEEecCCCC
Confidence 5 89999999999 88888755 667788999999986
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=8.4e-16 Score=154.94 Aligned_cols=249 Identities=8% Similarity=-0.043 Sum_probs=158.0
Q ss_pred CCCCCEEEEEEecCCCEEEE-----EcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 11 HDTKPVLTLDFHPISGLLAT-----GGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
+|...+.+++|||||++||. |+.+..|++||+.+++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----------------------------------- 162 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----------------------------------- 162 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-----------------------------------
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-----------------------------------
Confidence 45567999999999999984 33446788888887764200
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCe-------------EEEEEcCCCc----eEEEecccccCe
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNS-------------CIIWDVNKGS----VLQILDAHFHYV 148 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-------------i~vwd~~~~~----~~~~~~~h~~~v 148 (519)
..+. ......++|+|||+.|+.++.|.. |++|++.++. ++.....|...+
T Consensus 163 -----------~~~~--~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 163 -----------DVIE--GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF 229 (695)
T ss_dssp -----------CCBS--CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE
T ss_pred -----------cccC--cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE
Confidence 0000 011146789999999998888765 9999998876 333334455678
Q ss_pred EEEEEcCCCCeEEEeeCCC----eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEE
Q 010051 149 QGVAWDPLSKYVASLSSDR----TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRL 224 (519)
Q Consensus 149 ~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (519)
..+.|+|+|++|+..+.++ .|.+|+..+++...+ . .....+...
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l-----------------------------~---~~~~~~~~~ 277 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLL-----------------------------V---KGVGAKYEV 277 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEE-----------------------------E---ECSSCCEEE
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEe-----------------------------e---cCCCceEEE
Confidence 9999999999998877665 566665433321100 0 001122344
Q ss_pred EEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc--ccccCCCC-CCCeEEEEEcCCcccccccCCCCcccccceE
Q 010051 225 AWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR--PALQLPGA-SKPVVAVRFCPLAFNLRESNSAGFFKLPYRL 301 (519)
Q Consensus 225 ~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~--~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~ 301 (519)
.+ ++|. +++.+.. ......|++|++..... ....+..+ ...+..+.|+ ++ .+
T Consensus 278 ~~-~~g~-l~~~s~~------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~----------------~l 332 (695)
T 2bkl_A 278 HA-WKDR-FYVLTDE------GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG----------------HL 332 (695)
T ss_dssp EE-ETTE-EEEEECT------TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT----------------EE
T ss_pred Ee-cCCc-EEEEECC------CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC----------------EE
Confidence 45 6777 5554432 11236899999865432 12222333 4457777777 33 55
Q ss_pred EEEEecCCeEEEEeCC-CCCceEEEeccccccEEEEEEcCCCCEEEEEe----CCCcEEEEEecCCcc
Q 010051 302 IFAIATLNSLYIYDTE-SVPPIAILAGLHYAAITDIAWSNNARYLALSS----QDGYCTLVEFENDEL 364 (519)
Q Consensus 302 ~~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~----~dg~i~vwd~~~~~~ 364 (519)
+++...++..++|.+. ++.....+...+.+.+..++++|+++.|+... ..+.|++||+.+++.
T Consensus 333 v~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 333 SLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7777788877777554 35555555541266788899999998776332 347899999987753
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.70 E-value=7.6e-15 Score=133.68 Aligned_cols=250 Identities=12% Similarity=0.100 Sum_probs=165.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC------------------------CeEEEEEcCCCceEEEec-ccccCeEEEEEcCCC
Q 010051 103 RKDVLDLQWSTDGAFLLSGSVD------------------------NSCIIWDVNKGSVLQILD-AHFHYVQGVAWDPLS 157 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~d------------------------g~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~ 157 (519)
...+.+++++|+|+++++...+ +.|.+||..+++.+..+. .+-.....+++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4668899999999888877766 479999998898876654 344578999999999
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEe
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVP 236 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~ 236 (519)
+++++...++.|++|+....... .. .+...+. .-........+..++++| +|..+++.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~-~~--------~~~~~~~------------~g~~~~~~~~P~~ia~~~~~g~lyv~d 161 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGP-LL--------ILGRSMQ------------PGSDQNHFCQPTDVAVEPSTGAVFVSD 161 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCC-SE--------EESBTTB------------CCCSTTCCSSEEEEEECTTTCCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEE-EE--------EecccCC------------CCCCccccCCCcEEEEeCCCCeEEEEe
Confidence 98888888999999997653210 00 0000000 000011223567999999 77777765
Q ss_pred c-CCcceeeeecccceEEEEeccCCCcccccCC----------CCCCCeEEEEEcCC-cccccccCCCCcccccceEEEE
Q 010051 237 A-GSYKISSMSESINSAYIFSRKDLSRPALQLP----------GASKPVVAVRFCPL-AFNLRESNSAGFFKLPYRLIFA 304 (519)
Q Consensus 237 ~-~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~----------~~~~~v~~~~~sp~-~~~l~~~~~~g~~~~~~~~~~~ 304 (519)
+ .. +.|++|+.. ......+. ++......++++|+ + .++++
T Consensus 162 ~~~~----------~~I~~~~~~--g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g----------------~l~v~ 213 (329)
T 3fvz_A 162 GYCN----------SRIVQFSPS--GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD----------------QLCVA 213 (329)
T ss_dssp CSSC----------CEEEEECTT--SCEEEEECEECCSSSCCTTEESCEEEEEEETTTT----------------EEEEE
T ss_pred CCCC----------CeEEEEcCC--CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC----------------EEEEE
Confidence 4 34 577777743 22222221 22234788999998 5 45666
Q ss_pred EecCCeEEEEeCCCCCceEEEec-cccccEEEEEEcCCCCEEEEE-------eCCCcEEEEEecCCcccceeeecCCccc
Q 010051 305 IATLNSLYIYDTESVPPIAILAG-LHYAAITDIAWSNNARYLALS-------SQDGYCTLVEFENDELGIPISLSGNKVS 376 (519)
Q Consensus 305 ~~~d~~i~vwd~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~-------~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 376 (519)
...++.|++|+..+++.+..+.. .+...+..++|+| +..+++. ..+..|++|++.+++....+.. ...
T Consensus 214 d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~---~~~ 289 (329)
T 3fvz_A 214 DRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP---VRK 289 (329)
T ss_dssp ETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC---SSS
T ss_pred ECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC---CCC
Confidence 67788999999998988888743 1556788999999 4333333 3345899999988765443321 111
Q ss_pred ccCCCCcccccCCccEEEeecCCcee-eec
Q 010051 377 KDENKSPLVTKSEDMIIEASTNDKLV-TAE 405 (519)
Q Consensus 377 ~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~ 405 (519)
.......++++|+|.++++...++.| +|+
T Consensus 290 ~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 290 HFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp CCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred ccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 23456789999999777777666555 443
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.69 E-value=5.4e-14 Score=136.00 Aligned_cols=299 Identities=10% Similarity=0.043 Sum_probs=193.3
Q ss_pred cCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---------CCeEEEEEcc--cCCCcc
Q 010051 23 PISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---------GGELIIWKLH--TTETGQ 91 (519)
Q Consensus 23 p~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~i~vw~~~--~~~~~~ 91 (519)
|.+.++++...++.|.++|..+++.+.++... ..+..+.|+|+ ++.|.+||+. +.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g----------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~---- 230 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG----------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP---- 230 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS----------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC----
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC----------CCccceEECCCCCEEEEEcCCCeEEEEECCCCCC----
Confidence 44456777788999999999999887766432 23446666666 4678888885 33
Q ss_pred cceeeeccccCCCCeEEEEEc----CCCCEEEEEeC-CCeEEEEEcCCCceEEEeccc----------c-cCeEEEEEcC
Q 010051 92 AWKVLKNLSFHRKDVLDLQWS----TDGAFLLSGSV-DNSCIIWDVNKGSVLQILDAH----------F-HYVQGVAWDP 155 (519)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~h----------~-~~v~~~~~~~ 155 (519)
+.+..+.. ......++|+ |||+++++++. +++|.++|..+.+.+..+... . ..+..+..++
T Consensus 231 --~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~ 307 (567)
T 1qks_A 231 --TTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH 307 (567)
T ss_dssp --CEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS
T ss_pred --cEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcC
Confidence 34444443 3346899999 69999887765 589999999999888776422 1 2577888888
Q ss_pred CCCeE-EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEE
Q 010051 156 LSKYV-ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLL 234 (519)
Q Consensus 156 ~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~ 234 (519)
++..+ +....+|.|.++|....+..... . + ........+.|+|+|++++
T Consensus 308 ~~~~~vv~~~~~g~v~~vd~~~~~~~~v~--------~-------------------i---~~~~~~~d~~~~pdgr~~~ 357 (567)
T 1qks_A 308 YRPEFIVNVKETGKILLVDYTDLNNLKTT--------E-------------------I---SAERFLHDGGLDGSHRYFI 357 (567)
T ss_dssp SSSEEEEEETTTTEEEEEETTCSSEEEEE--------E-------------------E---ECCSSEEEEEECTTSCEEE
T ss_pred CCCEEEEEecCCCeEEEEecCCCccceee--------e-------------------e---eccccccCceECCCCCEEE
Confidence 76654 45556799999998764311000 0 0 1123345789999999998
Q ss_pred EecCCcceeeeecccceEEEEeccCCCcccccC-----CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe-cC
Q 010051 235 VPAGSYKISSMSESINSAYIFSRKDLSRPALQL-----PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA-TL 308 (519)
Q Consensus 235 ~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~-~d 308 (519)
++.... +.|.++|..+... ...+ ..|.+.-..+ ++|++. ...++.. .+
T Consensus 358 va~~~s---------n~V~ViD~~t~kl-~~~i~vgg~~Phpg~g~~~-~~p~~g---------------~v~~t~~~g~ 411 (567)
T 1qks_A 358 TAANAR---------NKLVVIDTKEGKL-VAIEDTGGQTPHPGRGANF-VHPTFG---------------PVWATSHMGD 411 (567)
T ss_dssp EEEGGG---------TEEEEEETTTTEE-EEEEECSSSSBCCTTCEEE-EETTTE---------------EEEEEEBSSS
T ss_pred EEeCCC---------CeEEEEECCCCcE-EEEEeccCcCCCCccceee-ECCCCC---------------cEEEeCCCCC
Confidence 876432 6888899875432 2111 1232212122 577642 2233332 46
Q ss_pred CeEEEEeCCC-------CCceEEEeccccccEEEEEEcCCCCEEEEEeC-------CCcEEEEEecCCcc---cc---ee
Q 010051 309 NSLYIYDTES-------VPPIAILAGLHYAAITDIAWSNNARYLALSSQ-------DGYCTLVEFENDEL---GI---PI 368 (519)
Q Consensus 309 ~~i~vwd~~~-------~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~-------dg~i~vwd~~~~~~---~~---~~ 368 (519)
+.|.++|..+ .+.+..+.. ....-..+..+|++++|.+... .++|.|+|+.+.+. .. .+
T Consensus 412 ~~Vsvid~~~~~~~~~~~kvv~~i~~-~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~ 490 (567)
T 1qks_A 412 DSVALIGTDPEGHPDNAWKILDSFPA-LGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTL 490 (567)
T ss_dssp SEEEEEECCTTTCTTTBTSEEEEEEC-SCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEE
T ss_pred CeEEEecCCCCCCccccCEEEEEEec-CCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEe
Confidence 8999999987 667777776 3333355789999999998763 35999999987621 11 11
Q ss_pred eec---CCcccccCCCCcccccCCccEEEee
Q 010051 369 SLS---GNKVSKDENKSPLVTKSEDMIIEAS 396 (519)
Q Consensus 369 ~~~---~~~~~~~~~~~~~~~s~~~~~l~~~ 396 (519)
... +.. .....+..+.|+++|.++.++
T Consensus 491 ~~~~~~~~~-~~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 491 PIAEWAGIT-EGQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp CHHHHHTCC-SSCCEEEEEEECTTSSEEEEE
T ss_pred ccccccccC-CCCcceEeeeECCCCCEEEEE
Confidence 110 000 012456789999999887765
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=3.8e-14 Score=125.39 Aligned_cols=241 Identities=7% Similarity=-0.030 Sum_probs=159.8
Q ss_pred CEEEEEEecCCCEEE-EEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccc
Q 010051 15 PVLTLDFHPISGLLA-TGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAW 93 (519)
Q Consensus 15 ~V~~~~~sp~~~~la-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~ 93 (519)
...+++++++|++++ +...++.|.+|+..++....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-------------------------------------------- 60 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-------------------------------------------- 60 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE--------------------------------------------
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce--------------------------------------------
Confidence 788999999999777 54667889888754332100
Q ss_pred eeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEe
Q 010051 94 KVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYA 173 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 173 (519)
. ...+...+.+++++++|+.+++.. ++.|.+||................+.+++++++++++++...++.|.+|+
T Consensus 61 --~--~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 135 (270)
T 1rwi_B 61 --L--PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLA 135 (270)
T ss_dssp --C--CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred --E--eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEE
Confidence 0 001223467789999998655555 88999999866544322222335789999999998777777788999997
Q ss_pred cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEE
Q 010051 174 NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAY 253 (519)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~ 253 (519)
..+...... .......+..++++++|+.+++.... +.|.
T Consensus 136 ~~~~~~~~~-------------------------------~~~~~~~p~~i~~~~~g~l~v~~~~~----------~~i~ 174 (270)
T 1rwi_B 136 AGSKTQTVL-------------------------------PFTGLNDPDGVAVDNSGNVYVTDTDN----------NRVV 174 (270)
T ss_dssp TTCCSCEEC-------------------------------CCCSCCSCCCEEECTTCCEEEEEGGG----------TEEE
T ss_pred CCCceeEee-------------------------------ccccCCCceeEEEeCCCCEEEEECCC----------CEEE
Confidence 544321000 00111245689999999866654433 5788
Q ss_pred EEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccE
Q 010051 254 IFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAI 333 (519)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i 333 (519)
+|+....... .....+...+..++++++| .++++...++.|.+|+............ +...+
T Consensus 175 ~~~~~~~~~~-~~~~~~~~~p~~i~~d~~g----------------~l~v~~~~~~~v~~~~~~~~~~~~~~~~-~~~~p 236 (270)
T 1rwi_B 175 KLEAESNNQV-VLPFTDITAPWGIAVDEAG----------------TVYVTEHNTNQVVKLLAGSTTSTVLPFT-GLNTP 236 (270)
T ss_dssp EECTTTCCEE-ECCCSSCCSEEEEEECTTC----------------CEEEEETTTSCEEEECTTCSCCEECCCC-SCSCE
T ss_pred EEecCCCceE-eecccCCCCceEEEECCCC----------------CEEEEECCCCcEEEEcCCCCcceeeccC-CCCCc
Confidence 8887643321 1222233668899999987 3455555677899999876544332222 34578
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEecCCc
Q 010051 334 TDIAWSNNARYLALSSQDGYCTLVEFENDE 363 (519)
Q Consensus 334 ~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~ 363 (519)
.+++++++|+++++...++.|+++++...+
T Consensus 237 ~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 237 LAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred eeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 999999999988888899999999987653
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.68 E-value=1.4e-15 Score=142.79 Aligned_cols=282 Identities=11% Similarity=0.052 Sum_probs=162.1
Q ss_pred CeeEEecCCCCC-EEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcc---eeEEEEccCCCeE
Q 010051 4 GTLQINWHDTKP-VLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSA---INILRFSPCGGEL 79 (519)
Q Consensus 4 ~~~~~~~~h~~~-V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~i 79 (519)
+....+..+... ...+.|||||++|+.++.++.|++||+.+++...... .+... -..++|.......
T Consensus 70 ~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~---------~~~~~~~~g~~l~~~~~~~~~ 140 (396)
T 3c5m_A 70 QQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT---------VDEEWKGYGTWVANSDCTKLV 140 (396)
T ss_dssp TEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---------CCTTEEEEEEEEECTTSSEEE
T ss_pred CcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe---------cccccCCCCCEEEeccCCccc
Confidence 333333333333 3348899999999999888899999998876433211 11110 0122332222222
Q ss_pred EEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEE-----eCCCeEEEEEcCCCceEEEecccccCeEEEEEc
Q 010051 80 IIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSG-----SVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWD 154 (519)
Q Consensus 80 ~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 154 (519)
.+|. ..+.|+|+++.++.+ ..+..|++||+.+++..... .+...+..+.|+
T Consensus 141 ~~~~-----------------------~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~s 196 (396)
T 3c5m_A 141 GIEI-----------------------LKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYR 196 (396)
T ss_dssp EEEE-----------------------EGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE
T ss_pred cccc-----------------------cccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceEC
Confidence 2221 124578899887755 35678999999988765544 466788999999
Q ss_pred C-CCCeEEEeeCC------CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 155 P-LSKYVASLSSD------RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 155 ~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
| +++.|+.++.+ ..|.+||+...+...... ......+..++|+
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~------------------------------~~~~~~~~~~~~s 246 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE------------------------------HAEGESCTHEFWI 246 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC------------------------------CCTTEEEEEEEEC
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec------------------------------cCCCccccceEEC
Confidence 9 78877766543 357888876543211100 0012346689999
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCccc-ccCCCCCCCeEEEEEcC-CcccccccCCCCcccccceEEEEE
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA-LQLPGASKPVVAVRFCP-LAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~-~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
|+|++|++.+.... ...+.+++||+....... .... ... +.|+| +|+.++....+..+.....-....
T Consensus 247 pdg~~l~~~~~~~~-----~~~~~l~~~d~~~g~~~~l~~~~----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 247 PDGSAMAYVSYFKG-----QTDRVIYKANPETLENEEVMVMP----PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp TTSSCEEEEEEETT-----TCCEEEEEECTTTCCEEEEEECC----SEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred CCCCEEEEEecCCC-----CccceEEEEECCCCCeEEeeeCC----CCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence 99998887643210 011349999986543211 1122 123 88999 986543221110000000000000
Q ss_pred ecCCeEEEEeCCCCCceEEEeccccc-----------cEEEEEEcCCCCEEEEEeC-CCcEEEEEec
Q 010051 306 ATLNSLYIYDTESVPPIAILAGLHYA-----------AITDIAWSNNARYLALSSQ-DGYCTLVEFE 360 (519)
Q Consensus 306 ~~d~~i~vwd~~~~~~~~~~~~~~~~-----------~i~~~~~s~~g~~l~~~~~-dg~i~vwd~~ 360 (519)
..+..|++||+.+++... +.. +.. .+..++|+|+|++|+.++. ++...||.++
T Consensus 317 ~~~~~i~~~d~~~~~~~~-l~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKSAQK-LCK-HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCEEEEEETTTTBCCE-EEE-CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCcEEEEecccCceEE-ccC-CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 134789999998877543 433 333 2567899999998887764 5666666554
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=2.2e-14 Score=145.03 Aligned_cols=238 Identities=12% Similarity=0.018 Sum_probs=155.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCe--------
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVDN-----SCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRT-------- 168 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~-------- 168 (519)
|...+..++|||||++||.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 444688999999999998776543 8999999999876543322 23678999999999999887765
Q ss_pred --------EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCc
Q 010051 169 --------CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSY 240 (519)
Q Consensus 169 --------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~ 240 (519)
|++|++.+++... ..++....+...+..+.|+|||++|++.+...
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~---------------------------~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 254 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSED---------------------------ILCAEFPDEPKWMGGAELSDDGRYVLLSIREG 254 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGC---------------------------EEEECCTTCTTCEEEEEECTTSCEEEEEEECS
T ss_pred cccCCCCEEEEEECCCCcccc---------------------------eEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc
Confidence 8899887654210 01112222344567899999999999876421
Q ss_pred ceeeeecccceEEEEeccC------CCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec---CCeE
Q 010051 241 KISSMSESINSAYIFSRKD------LSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT---LNSL 311 (519)
Q Consensus 241 ~~~~~~~~~~~i~i~~~~~------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~---d~~i 311 (519)
......+++||+.. .......+..+...+.. .|+|+|..++ +.+.. .+.|
T Consensus 255 -----~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~---------------~~s~~~~~~~~l 313 (710)
T 2xdw_A 255 -----CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFT---------------FKTNRHSPNYRL 313 (710)
T ss_dssp -----SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEE---------------EEECTTCTTCEE
T ss_pred -----CCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEE---------------EEECCCCCCCEE
Confidence 00136899999875 32234444455555544 4888875432 22222 3479
Q ss_pred EEEeCCCCCc--eEEEeccccc--cEEEEEEcCCCCEEEEEeCCCcEE--EEEecCCcccceeeecCCcccccCCCCccc
Q 010051 312 YIYDTESVPP--IAILAGLHYA--AITDIAWSNNARYLALSSQDGYCT--LVEFENDELGIPISLSGNKVSKDENKSPLV 385 (519)
Q Consensus 312 ~vwd~~~~~~--~~~~~~~~~~--~i~~~~~s~~g~~l~~~~~dg~i~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (519)
.+||+.++.. ...+.. |.. .+..++|++++.++++...|+..+ +|++.+++....+. .+ ...+..+.
T Consensus 314 ~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~--~~----~~~v~~~~ 386 (710)
T 2xdw_A 314 INIDFTDPEESKWKVLVP-EHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP--LE----VGSVVGYS 386 (710)
T ss_dssp EEEETTSCCGGGCEEEEC-CCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC--CC----SSEEEEEE
T ss_pred EEEeCCCCCcccceeccC-CCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC--CC----CceEEEEe
Confidence 9999987752 344444 433 688899998888888998898654 45554454222222 22 24566788
Q ss_pred ccCCccEEEe
Q 010051 386 TKSEDMIIEA 395 (519)
Q Consensus 386 ~s~~~~~l~~ 395 (519)
++|++..++.
T Consensus 387 ~s~d~~~l~~ 396 (710)
T 2xdw_A 387 GQKKDTEIFY 396 (710)
T ss_dssp CCTTCSEEEE
T ss_pred cCCCCCEEEE
Confidence 8998876653
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=8.8e-15 Score=134.71 Aligned_cols=244 Identities=14% Similarity=0.151 Sum_probs=146.8
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC---C--eEEEEEcCCCceEEEecccccCeEE
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD---N--SCIIWDVNKGSVLQILDAHFHYVQG 150 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g--~i~vwd~~~~~~~~~~~~h~~~v~~ 150 (519)
.+.|.+|++.++. . ..+ ..+..++|||||++|+.++.+ + .|++|++.+++.......+ . +..
T Consensus 42 ~~~l~~~d~~~~~------~-~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~ 108 (347)
T 2gop_A 42 ENTIVIENLKNNA------R-RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRS 108 (347)
T ss_dssp EEEEEEEETTTCC------E-EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEE
T ss_pred cceEEEEeCCCCc------e-EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccc
Confidence 3568888887652 1 122 457899999999999987754 2 4888899888765554433 4 999
Q ss_pred EEEcCCCCeEEEeeCC---------------------------CeEEEEecCCCCccccccccceeeEEEeccCcccccC
Q 010051 151 VAWDPLSKYVASLSSD---------------------------RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDD 203 (519)
Q Consensus 151 ~~~~~~~~~l~~~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (519)
+.|+|+++.|+.++.+ ..|.+||+.+++..
T Consensus 109 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~----------------------- 165 (347)
T 2gop_A 109 LEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI----------------------- 165 (347)
T ss_dssp EEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE-----------------------
T ss_pred eeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE-----------------------
Confidence 9999999999887643 45777777665310
Q ss_pred CccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecc-cceEEEEeccCCCcccccCCCCCCCeEEEEEcCC
Q 010051 204 SKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSES-INSAYIFSRKDLSRPALQLPGASKPVVAVRFCPL 282 (519)
Q Consensus 204 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~-~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 282 (519)
..+.. . .+..++|+|+| .++++..+.... ... ...+++++ ... ...+..+ ..+..+ +|+
T Consensus 166 ------~~l~~---~-~~~~~~~spdg-~~~~~~~~~~~~--~~~~~~~l~~~d---~~~-~~~l~~~-~~~~~~--spd 225 (347)
T 2gop_A 166 ------EEFEK---P-RFSSGIWHRDK-IVVNVPHREIIP--QYFKFWDIYIWE---DGK-EEKMFEK-VSFYAV--DSD 225 (347)
T ss_dssp ------EEEEE---E-TTCEEEEETTE-EEEEEECCCSSC--CSSCCEEEEEEE---TTE-EEEEEEE-ESEEEE--EEC
T ss_pred ------eeecC---C-CcccccCCCCe-EEEEEecccccc--cccccccEEEeC---CCc-eEEeccC-cceeeE--CCC
Confidence 00111 1 35689999999 666554321000 000 23555665 222 2222223 444444 899
Q ss_pred cccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEE-EEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 283 AFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITD-IAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 283 ~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
|+.++....+... .......|++|| +++....+.. |...+.. +.|+ ++ ++++++.++.++|| +.+
T Consensus 226 g~~l~~~~~~~~~--------~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 226 GERILLYGKPEKK--------YMSEHNKLYIYD--GKEVMGILDE-VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp SSCEEEEECCSSS--------CCCSSCEEEEEC--SSCEEESSTT-CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred CCEEEEEEccccC--------CccccceEEEEC--CCceEecccc-CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 8655332221100 000124788888 5554433344 6778886 9999 88 99999999999999 984
Q ss_pred CcccceeeecCCcccccCCCCcccccCCccEEEeecC
Q 010051 362 DELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTN 398 (519)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 398 (519)
++. ..+... ...+..++|+| .++++++.
T Consensus 292 g~~---~~~~~~----~~~v~~~~~s~--~~~~~~~~ 319 (347)
T 2gop_A 292 GEI---KPIAKG----RHWIMGFDVDE--IVVYLKET 319 (347)
T ss_dssp SSE---EEEECS----SSEEEEEEESS--SEEEEEEC
T ss_pred Cce---EEEecC----CCeEEeeeeeC--cEEEEEcC
Confidence 432 222111 24567788888 44444443
No 189
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.66 E-value=3.9e-14 Score=128.18 Aligned_cols=281 Identities=12% Similarity=0.026 Sum_probs=178.1
Q ss_pred EEEEecCCCEEEEEcC-----CCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCe--------------
Q 010051 18 TLDFHPISGLLATGGA-----DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGE-------------- 78 (519)
Q Consensus 18 ~~~~sp~~~~la~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------------- 78 (519)
.....|+++.+++... ++.|.+.|..+++.+.+++... .+ . ++++|++..
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~---------~P-~-va~spDG~~lyVan~~~~r~~~G 105 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF---------LP-N-PVVADDGSFIAHASTVFSRIARG 105 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS---------SC-E-EEECTTSSCEEEEEEEEEETTEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC---------CC-c-EEECCCCCEEEEEcccccccccC
Confidence 3456799998887765 6799999999999887765321 11 2 667776543
Q ss_pred -----EEEEEcccCCCcccceeeeccccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceEEEeccc
Q 010051 79 -----LIIWKLHTTETGQAWKVLKNLSFH-------RKDVLDLQWSTDGAFLLSGSV--DNSCIIWDVNKGSVLQILDAH 144 (519)
Q Consensus 79 -----i~vw~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~h 144 (519)
|.+||..+. +.+..+.-. ......++|+|||++|+++.. ++.|.++|+.+++.+..+...
T Consensus 106 ~~~~~VsviD~~t~------~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 106 ERTDYVEVFDPVTL------LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp EEEEEEEEECTTTC------CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred CCCCEEEEEECCCC------eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 555666554 333333211 124567899999999998864 689999999999998888542
Q ss_pred ccCeEEEEEcCCCCeEEEeeCCCeEEEEecCC-CCccccccccceeeEEEeccCcccccCCccccceeeecCCCccee-e
Q 010051 145 FHYVQGVAWDPLSKYVASLSSDRTCRIYANRP-TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFF-R 222 (519)
Q Consensus 145 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~ 222 (519)
. . ...+....+.+++.+.||.+.+.++.. ++... ... ..+.. ....+ .
T Consensus 180 g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~----------~~~---------------~~~~~--~~~~~~~ 229 (386)
T 3sjl_D 180 D--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI----------THT---------------EVFHP--EDEFLIN 229 (386)
T ss_dssp S--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEE----------EEC---------------CCCSC--TTSCBCS
T ss_pred C--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEE----------eec---------------ceecc--ccccccc
Confidence 2 1 223333456777888899999999876 33210 000 00000 00111 1
Q ss_pred EEEEc-cCCCeEEEecCCcceeeeecccceEEEEeccCCCccc-ccCC---------C-CCCCeEEEEEcCCcccccccC
Q 010051 223 RLAWS-PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA-LQLP---------G-ASKPVVAVRFCPLAFNLRESN 290 (519)
Q Consensus 223 ~~~~s-p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~-~~~~---------~-~~~~v~~~~~sp~~~~l~~~~ 290 (519)
...|. ++|++++++. . +.++++|.......+ ..+. + .......+.++|++..
T Consensus 230 ~~~~~~~dG~~~~vs~-~----------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~----- 293 (386)
T 3sjl_D 230 HPAYSQKAGRLVWPTY-T----------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR----- 293 (386)
T ss_dssp CCEEETTTTEEEEEBT-T----------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE-----
T ss_pred cceeEcCCCcEEEEeC-C----------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCe-----
Confidence 23554 6787666544 3 578888875432111 1000 0 0112223555666633
Q ss_pred CCCcccccceEEEEEec----------CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCC-EEEEE-eCCCcEEEEE
Q 010051 291 SAGFFKLPYRLIFAIAT----------LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNAR-YLALS-SQDGYCTLVE 358 (519)
Q Consensus 291 ~~g~~~~~~~~~~~~~~----------d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~-~~dg~i~vwd 358 (519)
++.... .+.|.++|+.+++.+..+.. ...+..|++++|++ +|+++ ..++.|.++|
T Consensus 294 -----------lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v--g~~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 294 -----------IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp -----------EEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred -----------EEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC--CCCcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 333321 25799999999999999876 45788999999997 66665 4589999999
Q ss_pred ecCCcccceeeecCCc
Q 010051 359 FENDELGIPISLSGNK 374 (519)
Q Consensus 359 ~~~~~~~~~~~~~~~~ 374 (519)
..+++....+...++.
T Consensus 361 ~~t~k~~~~i~~~~~p 376 (386)
T 3sjl_D 361 AESGEELRSVNQLGHG 376 (386)
T ss_dssp TTTCCEEEEECCCCSS
T ss_pred CCCCcEEEEecCCCCC
Confidence 9999887777776665
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=2.8e-14 Score=143.80 Aligned_cols=233 Identities=13% Similarity=-0.024 Sum_probs=151.0
Q ss_pred CCCCeEEEEEcCCCCEEEE-----EeCCCeEEEEEcCCCceEEEecccccCe--EEEEEcCCCCeEEEeeCCCe------
Q 010051 102 HRKDVLDLQWSTDGAFLLS-----GSVDNSCIIWDVNKGSVLQILDAHFHYV--QGVAWDPLSKYVASLSSDRT------ 168 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~-----~~~dg~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~~~~~dg~------ 168 (519)
|...+..++|||||++||. |+.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 5557889999999999983 4445789999999988641 1122222 67899999999999988776
Q ss_pred -------EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcc
Q 010051 169 -------CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYK 241 (519)
Q Consensus 169 -------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~ 241 (519)
|++|++.++.... ..++....+...+..+.|||||++|++.+.+..
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~---------------------------~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 249 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKD---------------------------TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW 249 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGC---------------------------EEEECCCCCTTCEEEEEECTTSCCEEEEEEETT
T ss_pred cCCCCCEEEEEECCCCchhc---------------------------eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC
Confidence 9999988764210 011222223356778999999999998764420
Q ss_pred eeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe---cCCeEEEEeCCC
Q 010051 242 ISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA---TLNSLYIYDTES 318 (519)
Q Consensus 242 ~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~---~d~~i~vwd~~~ 318 (519)
....+++++.... ....+..+...+....+ ++|. + ++... .++.|.+||+.+
T Consensus 250 ------~~~~l~~~~~~~~--~~~~l~~~~~~~~~~~~-~~g~-l---------------~~~s~~~~~~~~l~~~d~~~ 304 (695)
T 2bkl_A 250 ------SENDVYWKRPGEK--DFRLLVKGVGAKYEVHA-WKDR-F---------------YVLTDEGAPRQRVFEVDPAK 304 (695)
T ss_dssp ------TEEEEEEECTTCS--SCEEEEECSSCCEEEEE-ETTE-E---------------EEEECTTCTTCEEEEEBTTB
T ss_pred ------CceEEEEEcCCCC--ceEEeecCCCceEEEEe-cCCc-E---------------EEEECCCCCCCEEEEEeCCC
Confidence 1236777755322 23334444455556656 5553 2 22222 257899999988
Q ss_pred CCc---eEEEeccc-cccEEEEEEcCCCCEEEEEeCCCcEEEEEecC-CcccceeeecCCcccccCCCCcccccCCccEE
Q 010051 319 VPP---IAILAGLH-YAAITDIAWSNNARYLALSSQDGYCTLVEFEN-DELGIPISLSGNKVSKDENKSPLVTKSEDMII 393 (519)
Q Consensus 319 ~~~---~~~~~~~~-~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 393 (519)
+.. ...+.. + ...+..++|+ ++.++++...|+..+||.++. ++. ...+..+. ...+..+.++|++..+
T Consensus 305 ~~~~~~~~l~~~-~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~--~~~l~~~~---~~~v~~~~~s~d~~~l 377 (695)
T 2bkl_A 305 PARASWKEIVPE-DSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKP--VRTVQLPG---VGAASNLMGLEDLDDA 377 (695)
T ss_dssp CSGGGCEEEECC-CSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCE--EEECCCSS---SSEECCCBSCTTCSEE
T ss_pred CCccCCeEEecC-CCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCe--eEEecCCC---CeEEEEeecCCCCCEE
Confidence 764 333333 3 4568889998 778888999999999988763 321 11222111 2456778899998776
Q ss_pred Ee
Q 010051 394 EA 395 (519)
Q Consensus 394 ~~ 395 (519)
+.
T Consensus 378 ~~ 379 (695)
T 2bkl_A 378 YY 379 (695)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.65 E-value=7.3e-14 Score=126.94 Aligned_cols=271 Identities=10% Similarity=0.015 Sum_probs=168.1
Q ss_pred CCCcEEEEEecCCccccccccccccccccccCcceeEEEEc--------cCCCeEEEEEcccCCCcccceeeeccccCCC
Q 010051 33 ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFS--------PCGGELIIWKLHTTETGQAWKVLKNLSFHRK 104 (519)
Q Consensus 33 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 104 (519)
.++.|.+||..+++....+........ .......+++. ..++.|.+||..++ +.+..+. ...
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~---lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~------~~~~~i~-~~~ 84 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFK---LGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTF------KEVGRIT-GFT 84 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSC---CBSCEEEEEEETTEEEEEEGGGTEEEEEETTTC------CEEEEEE-CCS
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcc---cCccceEEEEECCEEEEEEcCCCEEEEEECccc------EEEEEcC-CCC
Confidence 378999999999887655421100000 11112223322 23689999999877 4545553 346
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEEecccc-----cCeEEEEEcCCCCeEEEee--CCCeEEEEecCC
Q 010051 105 DVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQILDAHF-----HYVQGVAWDPLSKYVASLS--SDRTCRIYANRP 176 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~ 176 (519)
....++++++++ |+.+. .++.|.+||+.+++....+.... .....+++ ++..|+++. .++.|.++|+.+
T Consensus 85 ~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 85 SPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp SEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTT
T ss_pred CCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCC
Confidence 789999999984 55554 78999999999998877665432 14456777 345555554 488999999987
Q ss_pred CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEe
Q 010051 177 TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFS 256 (519)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~ 256 (519)
++...... .......+.++|+|++++++.+...-..+....+.++++|
T Consensus 162 ~~~~~~i~--------------------------------~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 162 DKVVDELT--------------------------------IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp TEEEEEEE--------------------------------CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred CeEEEEEE--------------------------------cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 65211100 0122457899999997776654311000011125788998
Q ss_pred ccCCCcccccCC-CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEE--EeccccccE
Q 010051 257 RKDLSRPALQLP-GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAI--LAGLHYAAI 333 (519)
Q Consensus 257 ~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~--~~~~~~~~i 333 (519)
..+.. ....+. ........++|+|++. .++.+.. .|.+||..+++.... +.. +....
T Consensus 210 ~~t~~-v~~~~~~~~g~~p~~la~~~d~~----------------~lyv~~~--~v~~~d~~t~~~~~~~~~~~-~~~~p 269 (328)
T 3dsm_A 210 AETFT-VEKQFKFKLGDWPSEVQLNGTRD----------------TLYWINN--DIWRMPVEADRVPVRPFLEF-RDTKY 269 (328)
T ss_dssp TTTTE-EEEEEECCTTCCCEEEEECTTSC----------------EEEEESS--SEEEEETTCSSCCSSCSBCC-CSSCE
T ss_pred CCCCe-EEEEEecCCCCCceeEEEecCCC----------------EEEEEcc--EEEEEECCCCceeeeeeecC-CCCce
Confidence 76543 222221 1123678999999884 4444433 899999988875421 111 24568
Q ss_pred EEEEEcC-CCCEEEEE----eCCCcEEEEEecCCcccceee
Q 010051 334 TDIAWSN-NARYLALS----SQDGYCTLVEFENDELGIPIS 369 (519)
Q Consensus 334 ~~~~~s~-~g~~l~~~----~~dg~i~vwd~~~~~~~~~~~ 369 (519)
..++++| ++.++++. ..++.|.+||.. ++....+.
T Consensus 270 ~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 270 YGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 8999999 45555555 567899999987 65544443
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.63 E-value=7.7e-12 Score=112.32 Aligned_cols=276 Identities=10% Similarity=-0.019 Sum_probs=179.7
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcc
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQ 91 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~ 91 (519)
....+.+++++++|+++++...++.|.+||.. ++... +.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~--------------------------------~~-------- 56 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE--------------------------------FE-------- 56 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE--------------------------------EE--------
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE--------------------------------EE--------
Confidence 35688999999999988877777889888865 43110 00
Q ss_pred cceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEE-EecccccCeEEEEEcCCCCeEEEeeCCCeEE
Q 010051 92 AWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQ-ILDAHFHYVQGVAWDPLSKYVASLSSDRTCR 170 (519)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~ 170 (519)
+..+...+.++++.++|..+++...++.|..||.. ++... .+......+.++++.++++++++...++.|.
T Consensus 57 -------~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 128 (300)
T 2qc5_A 57 -------VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIG 128 (300)
T ss_dssp -------CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred -------CCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEE
Confidence 01123567889999999877776667899999987 65432 2222346789999999998877776688899
Q ss_pred EEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccc
Q 010051 171 IYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESIN 250 (519)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~ 250 (519)
.||.. ++... +........+..+++.++|+.+++.... +
T Consensus 129 ~~~~~-g~~~~------------------------------~~~~~~~~~~~~i~~d~~g~l~v~~~~~----------~ 167 (300)
T 2qc5_A 129 KLTAD-GTIYE------------------------------YDLPNKGSYPAFITLGSDNALWFTENQN----------N 167 (300)
T ss_dssp EECTT-SCEEE------------------------------EECSSTTCCEEEEEECTTSSEEEEETTT----------T
T ss_pred EECCC-CCEEE------------------------------ccCCCCCCCceeEEECCCCCEEEEecCC----------C
Confidence 99876 33110 0000112346789999999966655444 4
Q ss_pred eEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEE-Eeccc
Q 010051 251 SAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAI-LAGLH 329 (519)
Q Consensus 251 ~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~ 329 (519)
.+..|+.. ..........+...+..+++.++| ++.++....+.|.+|+. ++..... +.. +
T Consensus 168 ~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g----------------~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-~ 228 (300)
T 2qc5_A 168 SIGRITNT-GKLEEYPLPTNAAAPVGITSGNDG----------------ALWFVEIMGNKIGRITT-TGEISEYDIPT-P 228 (300)
T ss_dssp EEEEECTT-CCEEEEECSSTTCCEEEEEECTTS----------------SEEEEETTTTEEEEECT-TCCEEEEECSS-T
T ss_pred eEEEECCC-CcEEEeeCCCCCCCcceEEECCCC----------------CEEEEccCCCEEEEEcC-CCcEEEEECCC-C
Confidence 67777762 221122233344568889999887 33444445668999998 4544333 222 4
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceee
Q 010051 330 YAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVT 403 (519)
Q Consensus 330 ~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 403 (519)
...+.+++++++|+++++...++.|.+|+.. +.. ..+.+.. ....+..+++.++|.+.++.. .+...
T Consensus 229 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~----~~~~~~~i~~~~~g~l~v~~~-~~i~~ 295 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTEWGANQIGRITND-NTI-QEYQLQT----ENAEPHGITFGKDGSVWFALK-CKIGK 295 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE-EEEECCS----TTCCCCCEEECTTSCEEEECS-SEEEE
T ss_pred CCCceEEEECCCCCEEEeccCCCeEEEECCC-CcE-EEEECCc----cCCccceeEeCCCCCEEEEcc-CceEE
Confidence 5678999999999977776667899999873 322 2222221 124578888999988766665 34443
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=4.5e-13 Score=121.35 Aligned_cols=246 Identities=11% Similarity=0.091 Sum_probs=159.3
Q ss_pred CCCCCEEEEEEecCCCEEEE-------EcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEE
Q 010051 11 HDTKPVLTLDFHPISGLLAT-------GGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWK 83 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~ 83 (519)
..-....+++|++++.++++ +..++.|.+||..+++... +.
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~--------------------------------~~ 62 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV--------------------------------IC 62 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE--------------------------------EE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE--------------------------------EE
Confidence 34456789999999988887 5667888888876654211 00
Q ss_pred cccCCCcccceeeeccccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceEEE-ecc----cccCeEEEEEcCCC
Q 010051 84 LHTTETGQAWKVLKNLSFHRKDVLDLQWSTD-GAFLLSGSVDNSCIIWDVNKGSVLQI-LDA----HFHYVQGVAWDPLS 157 (519)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~----h~~~v~~~~~~~~~ 157 (519)
. ....++...+.+++++++ |+++ .++..+.|.+||.. ++.... ... ....+.++++++++
T Consensus 63 ~------------~~~~~~~~~~~~i~~~~~~g~l~-v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g 128 (314)
T 1pjx_A 63 K------------PEVNGYGGIPAGCQCDRDANQLF-VADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG 128 (314)
T ss_dssp C------------CEETTEECCEEEEEECSSSSEEE-EEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS
T ss_pred e------------cccCCCCCCCceEEEecCCCcEE-EEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC
Confidence 0 000113346889999999 6544 44445579999987 765433 221 12357899999999
Q ss_pred CeEEEeeCC---------------CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceee
Q 010051 158 KYVASLSSD---------------RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFR 222 (519)
Q Consensus 158 ~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (519)
+++++...+ +.|..|+.. ++... .. .......
T Consensus 129 ~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~----------~~----------------------~~~~~~~ 175 (314)
T 1pjx_A 129 NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ----------VD----------------------TAFQFPN 175 (314)
T ss_dssp CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE----------EE----------------------EEESSEE
T ss_pred CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE----------ec----------------------cCCCCcc
Confidence 877776554 456666654 22100 00 0012345
Q ss_pred EEEEc----cCCCeEEEec-CCcceeeeecccceEEEEeccCCCc-----ccccCCCCC-CCeEEEEEcCCcccccccCC
Q 010051 223 RLAWS----PDGSFLLVPA-GSYKISSMSESINSAYIFSRKDLSR-----PALQLPGAS-KPVVAVRFCPLAFNLRESNS 291 (519)
Q Consensus 223 ~~~~s----p~g~~l~~~~-~~~~~~~~~~~~~~i~i~~~~~~~~-----~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~ 291 (519)
.++|+ |+|+.++++. .. +.|++|+...... ....+..+. .....++++++|
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~----------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G-------- 237 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPT----------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN-------- 237 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTT----------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC--------
T ss_pred eEEEecccCCCCCEEEEEECCC----------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC--------
Confidence 78999 9997766653 33 5788888652111 222344443 557788999887
Q ss_pred CCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEE-EEeCCCcEEEEEecCC
Q 010051 292 AGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLA-LSSQDGYCTLVEFEND 362 (519)
Q Consensus 292 ~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~~~~dg~i~vwd~~~~ 362 (519)
+++++...++.|.+||..+++.+..+.. +...+.+++|+++|++|+ +...++.|..|++...
T Consensus 238 --------~l~v~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 238 --------NLLVANWGSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp --------CEEEEEETTTEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred --------CEEEEEcCCCEEEEEcCCCCcEeEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 4456666678999999987877777766 667899999999999555 4455688999998653
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=1.4e-12 Score=126.20 Aligned_cols=271 Identities=13% Similarity=0.041 Sum_probs=171.4
Q ss_pred EEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCceEEEecccccC
Q 010051 70 LRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVN--KGSVLQILDAHFHY 147 (519)
Q Consensus 70 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~h~~~ 147 (519)
+.....++.|.++|..++ +.+..+.. ...+..+.|+|||++|++++.|+.|.+||+. +++.+..+.... .
T Consensus 170 ~V~~~~~~~V~viD~~t~------~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~ 241 (567)
T 1qks_A 170 SVTLRDAGQIALIDGSTY------EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-E 241 (567)
T ss_dssp EEEETTTTEEEEEETTTC------CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-E
T ss_pred EEEeCCCCeEEEEECCCC------eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-C
Confidence 334456799999999877 45555542 3457799999999999999999999999996 788877776543 4
Q ss_pred eEEEEEc----CCCCeEEEeeC-CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceee
Q 010051 148 VQGVAWD----PLSKYVASLSS-DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFR 222 (519)
Q Consensus 148 v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (519)
...++|+ |+|++++++.. ++++.++|..+.+........ +.. ....-+. ....+.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~----------~~~-------~~~~~~~---p~~rva 301 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR----------GMT-------YDEQEYH---PEPRVA 301 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC----------EEC-------TTTCCEE---SCCCEE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecc----------ccc-------ccccccc---CCCceE
Confidence 5799999 69998877665 599999998776532211110 000 0000000 011455
Q ss_pred EEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEE
Q 010051 223 RLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLI 302 (519)
Q Consensus 223 ~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~ 302 (519)
.+..++++..+++...+ .+.+.++|....................+.|+|+|+++ +
T Consensus 302 ~i~~s~~~~~~vv~~~~---------~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~---------------~ 357 (567)
T 1qks_A 302 AILASHYRPEFIVNVKE---------TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF---------------I 357 (567)
T ss_dssp EEEECSSSSEEEEEETT---------TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE---------------E
T ss_pred EEEEcCCCCEEEEEecC---------CCeEEEEecCCCccceeeeeeccccccCceECCCCCEE---------------E
Confidence 77888887766654332 26888888765432211111223456678999998543 3
Q ss_pred EEEecCCeEEEEeCCCCCceEEEec----cccccEEEEEEcCCC-CEEEEEe-CCCcEEEEEecCCc-----ccceeeec
Q 010051 303 FAIATLNSLYIYDTESVPPIAILAG----LHYAAITDIAWSNNA-RYLALSS-QDGYCTLVEFENDE-----LGIPISLS 371 (519)
Q Consensus 303 ~~~~~d~~i~vwd~~~~~~~~~~~~----~~~~~i~~~~~s~~g-~~l~~~~-~dg~i~vwd~~~~~-----~~~~~~~~ 371 (519)
++...++.|.++|+.+++.+..+.. .|.+.-..+ ++|++ .+++++. .++.|.++|....+ +.....+.
T Consensus 358 va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 358 TAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe
Confidence 4444678999999999987766643 243222222 68874 4455554 46899999998732 11222222
Q ss_pred CCcccccCCCCcccccCCccEEEeec
Q 010051 372 GNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 372 ~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
.. ...-.-+..+|++++|....
T Consensus 437 ~~----g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 437 AL----GGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp CS----CSCCCCEECCTTCSEEEEEC
T ss_pred cC----CCCCEEEEeCCCCCeEEEec
Confidence 21 12224467899998887755
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=2.8e-14 Score=144.91 Aligned_cols=249 Identities=12% Similarity=0.059 Sum_probs=152.7
Q ss_pred CCCCEEEEEEecCCCEEEEEcCC-----CcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEccc
Q 010051 12 DTKPVLTLDFHPISGLLATGGAD-----YDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHT 86 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~ 86 (519)
|...+.+++|||||++||.++.+ ..|++||+.+++.+...
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~----------------------------------- 205 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE----------------------------------- 205 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-----------------------------------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-----------------------------------
Confidence 44478899999999999877543 35888888877642100
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCC--------------eEEEEEcCCCce--EEEe--cccccCe
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDN--------------SCIIWDVNKGSV--LQIL--DAHFHYV 148 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------------~i~vwd~~~~~~--~~~~--~~h~~~v 148 (519)
. +...+..++|+|| +.|+.++.++ .|++|++.++.. ...+ ..+...+
T Consensus 206 ---------~-----~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 206 ---------L-----KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp ---------E-----EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred ---------C-----CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 0 0001234667777 7666666544 499999987752 2223 3333458
Q ss_pred EEEEEcCCCCeEEEeeCCC-----eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeE
Q 010051 149 QGVAWDPLSKYVASLSSDR-----TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRR 223 (519)
Q Consensus 149 ~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 223 (519)
..+.|+|+|++|+..+.++ .|.+||+.++.... ...+. .....+..
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~--------~~~l~---------------------~~~~~~~~ 321 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP--------VTALI---------------------PDLKAQWD 321 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC--------CEEEE---------------------CSSSSCEE
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc--------cEEec---------------------CCCCceEE
Confidence 8999999999988777544 79999987641000 00000 00111222
Q ss_pred EEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC-cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEE
Q 010051 224 LAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS-RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLI 302 (519)
Q Consensus 224 ~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~ 302 (519)
. ++|+|+.|++.+... .....|++|++.... .....+..+...+..+.|+ ++ .++
T Consensus 322 ~-~~~dg~~l~~~s~~~------~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~----------------~lv 377 (741)
T 1yr2_A 322 F-VDGVGDQLWFVSGDG------APLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN----------------RLF 377 (741)
T ss_dssp E-EEEETTEEEEEECTT------CTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT----------------EEE
T ss_pred E-EeccCCEEEEEECCC------CCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC----------------EEE
Confidence 3 348999888876541 123578899986531 2233344454556666666 22 456
Q ss_pred EEEecCCeEEEEeCC-CCCceEEEeccccccEEEEEEcCCCCEEEEE-e---CCCcEEEEEecCCc
Q 010051 303 FAIATLNSLYIYDTE-SVPPIAILAGLHYAAITDIAWSNNARYLALS-S---QDGYCTLVEFENDE 363 (519)
Q Consensus 303 ~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~---~dg~i~vwd~~~~~ 363 (519)
++...++..+||.+. ++.....+...+.+.+..+.++|+++.|+.. + ..++|++||+.+++
T Consensus 378 ~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 378 ASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 777778776666443 3555555554235678999999999866533 2 34789999998765
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=3.3e-12 Score=117.54 Aligned_cols=273 Identities=8% Similarity=-0.066 Sum_probs=164.3
Q ss_pred EEEecCCCEEEEEcC--CC---cEEEEEecCCccccccccccccccccccCcceeEEEEccCCC----------------
Q 010051 19 LDFHPISGLLATGGA--DY---DIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGG---------------- 77 (519)
Q Consensus 19 ~~~sp~~~~la~~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------- 77 (519)
....|+++++.+... .. .|.+||..+++.+..++... . . .++++|+++
T Consensus 26 ~~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~---------~-p-~i~~spDg~~lyv~n~~~~~~~rg~ 94 (373)
T 2mad_H 26 EAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF---------L-P-NPVAAHSGSEFALASTSFSRIAKGK 94 (373)
T ss_pred ccCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC---------C-C-CeEECCCCCEEEEEeccccccccCC
Confidence 345688887777653 22 78999999998776554321 1 1 666666654
Q ss_pred ---eEEEEEcccCCCcccceeeeccccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceEEE-eccc
Q 010051 78 ---ELIIWKLHTTETGQAWKVLKNLSFH-------RKDVLDLQWSTDGAFLLSGSV--DNSCIIWDVNKGSVLQI-LDAH 144 (519)
Q Consensus 78 ---~i~vw~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~-~~~h 144 (519)
.|.+||..+. +.+..+... ......++|+|||++|+++.. ++.|.++| .+++.+.. +...
T Consensus 95 ~~~~v~viD~~t~------~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~ 167 (373)
T 2mad_H 95 RTDYVEVFDPVTF------LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP 167 (373)
T ss_pred CCCeEEEEECCCC------cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence 4556665543 222222111 123558999999999998874 57899999 99988877 5432
Q ss_pred ccCeEEEEEcCCC-CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeE
Q 010051 145 FHYVQGVAWDPLS-KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRR 223 (519)
Q Consensus 145 ~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 223 (519)
. ++.+.|++ +.+++.+.||.+.++|. +++........ ..+ ... ......
T Consensus 168 -~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~-----------------------~~~-~~~-~p~~~~ 217 (373)
T 2mad_H 168 -T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVG-----------------------AML-TAA-QNLLTQ 217 (373)
T ss_pred -c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecc-----------------------ccc-cCC-cceeec
Confidence 2 24445554 45667778999999999 65422100000 000 000 001123
Q ss_pred EEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCccc-ccCCCC----------CCCeEEEEEcCCcccccccCCC
Q 010051 224 LAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA-LQLPGA----------SKPVVAVRFCPLAFNLRESNSA 292 (519)
Q Consensus 224 ~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~-~~~~~~----------~~~v~~~~~sp~~~~l~~~~~~ 292 (519)
..+.+++..++..+.. +.+++.|+......+ ..+.-. ......+.++|++.
T Consensus 218 ~~~~~~~~~~~~~~~~----------~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~-------- 279 (373)
T 2mad_H 218 PAQANKSGRIVWPVYS----------GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD-------- 279 (373)
T ss_pred ceeEecCCEEEEEcCC----------ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCC--------
Confidence 4566666555444433 467777764322111 111100 11223355566553
Q ss_pred CcccccceEEEEEec----------CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCC-EEEEEe-CCCcEEEEEec
Q 010051 293 GFFKLPYRLIFAIAT----------LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNAR-YLALSS-QDGYCTLVEFE 360 (519)
Q Consensus 293 g~~~~~~~~~~~~~~----------d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~-~dg~i~vwd~~ 360 (519)
.++.... .+.|.++|+.+++.+..+.. ......++|+|||+ +|+++. .++.|.+||+.
T Consensus 280 --------~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 280 --------GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred --------EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 3343322 36899999999999988875 44689999999999 777776 48999999999
Q ss_pred CCcccce
Q 010051 361 NDELGIP 367 (519)
Q Consensus 361 ~~~~~~~ 367 (519)
+.+....
T Consensus 350 t~~vv~~ 356 (373)
T 2mad_H 350 AGDQDQS 356 (373)
T ss_pred CCCEEee
Confidence 8865444
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=1.3e-12 Score=115.06 Aligned_cols=230 Identities=13% Similarity=0.072 Sum_probs=155.4
Q ss_pred CCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccceeeeccccCC
Q 010051 24 ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHR 103 (519)
Q Consensus 24 ~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~ 103 (519)
.+++|++++.++.|++||.++|+.+ |.+.. +.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~---------------------------------w~~~~---------------~~ 35 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV---------------------------------WEYPL---------------EK 35 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE---------------------------------EEEEC---------------CT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE---------------------------------EEeCC---------------Cc
Confidence 3578889999999999998888743 32221 11
Q ss_pred -CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccc-cCeEEEEEcCCCCeEEEeeC-CCeEEEEecCCCCcc
Q 010051 104 -KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF-HYVQGVAWDPLSKYVASLSS-DRTCRIYANRPTKSK 180 (519)
Q Consensus 104 -~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~ 180 (519)
..+.++.++|+|++|+ +.++.|..||. +|+.+..+..+. ..+.++.+.++|+++++.+. ++.|..+|.. ++..
T Consensus 36 ~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l 111 (276)
T 3no2_A 36 GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVL 111 (276)
T ss_dssp TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEE
T ss_pred cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEE
Confidence 3567889999999888 34788999998 899988887653 47888999999999999887 7777777753 3211
Q ss_pred ccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCC
Q 010051 181 GVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDL 260 (519)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~ 260 (519)
....+ ... ..........+++.++|.++++...+ +.+..||..
T Consensus 112 ~~~~~----------~~~---------------~~~~~~~~~~v~~~~~G~~lv~~~~~----------~~v~~~d~~-- 154 (276)
T 3no2_A 112 SKTEF----------ETG---------------IERPHAQFRQINKNKKGNYLVPLFAT----------SEVREIAPN-- 154 (276)
T ss_dssp EEEEE----------CCS---------------CSSGGGSCSCCEECTTSCEEEEETTT----------TEEEEECTT--
T ss_pred EEEec----------cCC---------------CCcccccccCceECCCCCEEEEecCC----------CEEEEECCC--
Confidence 10000 000 00011224456789999999987766 466777764
Q ss_pred CcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEecccc------ccEE
Q 010051 261 SRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHY------AAIT 334 (519)
Q Consensus 261 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~------~~i~ 334 (519)
++.+..+... .....+.+.++| +.++++..++.|..+|..+++.+..+.. +. ..+.
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g----------------~~~v~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~l~~~~ 216 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNG----------------DCLVACGDAHCFVQLNLESNRIVRRVNA-NDIEGVQLFFVA 216 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTS----------------CEEEECBTTSEEEEECTTTCCEEEEEEG-GGSBSCCCSEEE
T ss_pred CCEEEEEECC-CCccceeEcCCC----------------CEEEEeCCCCeEEEEeCcCCcEEEEecC-CCCCCccccccc
Confidence 2323332222 234456667776 5566667777999999999999988865 32 2378
Q ss_pred EEEEcCCCCEEEEEeCC--------CcEEEEEec
Q 010051 335 DIAWSNNARYLALSSQD--------GYCTLVEFE 360 (519)
Q Consensus 335 ~~~~s~~g~~l~~~~~d--------g~i~vwd~~ 360 (519)
.+...++|.++++.... +..+++++.
T Consensus 217 ~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~ 250 (276)
T 3no2_A 217 QLFPLQNGGLYICNWQGHDREAGKGKHPQLVEID 250 (276)
T ss_dssp EEEECTTSCEEEEEECTTCTTGGGSCCCSEEEEC
T ss_pred cceEcCCCCEEEEeccCccccccccCCceEEEEC
Confidence 89999999988887421 244677774
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=3.2e-13 Score=118.83 Aligned_cols=225 Identities=8% Similarity=0.000 Sum_probs=150.8
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceEEEecccc-cCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEE
Q 010051 114 DGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF-HYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHV 192 (519)
Q Consensus 114 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 192 (519)
.++.|++++.++.|.+||.++|+.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +++..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~------------ 68 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGREL------------ 68 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEE------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEE------------
Confidence 36789999999999999999999999988765 4688999999999888 34778999998 55421
Q ss_pred EeccCcccccCCccccceeeecCC-CcceeeEEEEccCCCeEEEecC-CcceeeeecccceEEEEeccCCCcccccCCCC
Q 010051 193 ITKAGQHSTDDSKSAKNHLFHDET-LPSFFRRLAWSPDGSFLLVPAG-SYKISSMSESINSAYIFSRKDLSRPALQLPGA 270 (519)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~~~~~-~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~ 270 (519)
+.... ....+.++.+.|+|+.+++.+. ...+..+......++-+.+... ...+
T Consensus 69 -------------------W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~------~~~~ 123 (276)
T 3no2_A 69 -------------------WNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETG------IERP 123 (276)
T ss_dssp -------------------EEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCS------CSSG
T ss_pred -------------------EEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCC------CCcc
Confidence 11111 1234668899999999998776 4333333222222222222110 0111
Q ss_pred CCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeC
Q 010051 271 SKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQ 350 (519)
Q Consensus 271 ~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~ 350 (519)
......+.+.++| +++++...++.|..||.. |+.+..+.. + ..+.++.+.++|++|++++.
T Consensus 124 ~~~~~~v~~~~~G----------------~~lv~~~~~~~v~~~d~~-G~~~w~~~~-~-~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 124 HAQFRQINKNKKG----------------NYLVPLFATSEVREIAPN-GQLLNSVKL-S-GTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp GGSCSCCEECTTS----------------CEEEEETTTTEEEEECTT-SCEEEEEEC-S-SCCCEEEECTTSCEEEECBT
T ss_pred cccccCceECCCC----------------CEEEEecCCCEEEEECCC-CCEEEEEEC-C-CCccceeEcCCCCEEEEeCC
Confidence 1223344566666 667777788899999998 999888876 3 45667888999999999888
Q ss_pred CCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeec
Q 010051 351 DGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 351 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
++.|..+|..+++....+............+..++..++|.++++..
T Consensus 185 ~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 185 AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 88999999887765444432111110112245666778888877764
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.58 E-value=2.2e-13 Score=138.30 Aligned_cols=235 Identities=14% Similarity=0.114 Sum_probs=146.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCe--------
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVD-----NSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRT-------- 168 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~-------- 168 (519)
|...+..++|||||++|+.++.+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 33467889999999999877654 46999999999875532 12222357899999 98888877654
Q ss_pred ------EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcce
Q 010051 169 ------CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKI 242 (519)
Q Consensus 169 ------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~ 242 (519)
|++|++.++.... ..++........+..+.|||||++|++.+.+..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~---------------------------~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 290 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSAD---------------------------QPVFATPELPKRGHGASVSSDGRWVVITSSEGT- 290 (741)
T ss_dssp CCCCCEEEEEETTSCGGGC---------------------------EEEECCTTCTTCEEEEEECTTSCEEEEEEECTT-
T ss_pred CCCCCEEEEEECCCCchhC---------------------------EEEeccCCCCeEEEEEEECCCCCEEEEEEEccC-
Confidence 7778776543110 011122222335678999999999988764320
Q ss_pred eeeecccceEEEEeccCCCcc-cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec----CCeEEEEeCC
Q 010051 243 SSMSESINSAYIFSRKDLSRP-ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT----LNSLYIYDTE 317 (519)
Q Consensus 243 ~~~~~~~~~i~i~~~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~----d~~i~vwd~~ 317 (519)
.....+++||+...... ...+..+...+.... +|+|..| +..+. ++.|.+||+.
T Consensus 291 ----~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l----------------~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 291 ----DPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQL----------------WFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp ----CSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEE----------------EEEECTTCTTCEEEEEECS
T ss_pred ----CCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEE----------------EEEECCCCCCCEEEEEeCC
Confidence 12358999998754212 333444444444443 4777543 33332 4579999998
Q ss_pred CC--CceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC-CcccceeeecCCcccccCCCCcccccCCccEEE
Q 010051 318 SV--PPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN-DELGIPISLSGNKVSKDENKSPLVTKSEDMIIE 394 (519)
Q Consensus 318 ~~--~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 394 (519)
++ .....+.. +...+..++|+ ++.++++...|+..+||.++. +.....+..++ ...+..+.++|++..|+
T Consensus 350 ~~~~~~~~l~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~-----~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 350 GSTPRFDTVVPE-SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG-----IGSASGLSGRPGDRHAY 422 (741)
T ss_dssp SSSCEEEEEECC-CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSS-----SCEEEEEECCBTCSCEE
T ss_pred CCccccEEEecC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCC-----CeEEEEeecCCCCCEEE
Confidence 75 23333443 55567788887 667888888999988887762 32112222111 23466788889887665
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=1.5e-12 Score=118.17 Aligned_cols=265 Identities=11% Similarity=-0.006 Sum_probs=161.5
Q ss_pred CCCeEEEEEcccCCCcccceeeeccc------cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCe
Q 010051 75 CGGELIIWKLHTTETGQAWKVLKNLS------FHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYV 148 (519)
Q Consensus 75 ~~~~i~vw~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v 148 (519)
.++.|.++|..++ +....+. ........+++. +++.+++...++.|.+||..+++.+..+.. ....
T Consensus 15 ~~~~l~~~d~~t~------~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p 86 (328)
T 3dsm_A 15 SNATLSYYDPATC------EVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSP 86 (328)
T ss_dssp CCBEEEEEETTTT------EEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSE
T ss_pred CCceEEEEECCCC------EEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCC
Confidence 4688999999876 3322221 122346778874 344455555679999999999999888853 4668
Q ss_pred EEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc
Q 010051 149 QGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP 228 (519)
Q Consensus 149 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 228 (519)
..++++++++.+++...++.|.+||+.+.+......... ..........+++
T Consensus 87 ~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~--------------------------~~~~~~~p~~i~~-- 138 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPD--------------------------MDMESGSTEQMVQ-- 138 (328)
T ss_dssp EEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT--------------------------CCTTTCBCCCEEE--
T ss_pred cEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC--------------------------ccccCCCcceEEE--
Confidence 899998888544444479999999998765221110000 0000013345666
Q ss_pred CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecC
Q 010051 229 DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL 308 (519)
Q Consensus 229 ~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d 308 (519)
++..++++... ..+.|.++|..+.. ....+.. ......+.++|+|+ +++++..+
T Consensus 139 ~~~~lyv~~~~--------~~~~v~viD~~t~~-~~~~i~~-g~~p~~i~~~~dG~----------------l~v~~~~~ 192 (328)
T 3dsm_A 139 YGKYVYVNCWS--------YQNRILKIDTETDK-VVDELTI-GIQPTSLVMDKYNK----------------MWTITDGG 192 (328)
T ss_dssp ETTEEEEEECT--------TCCEEEEEETTTTE-EEEEEEC-SSCBCCCEECTTSE----------------EEEEBCCB
T ss_pred ECCEEEEEcCC--------CCCEEEEEECCCCe-EEEEEEc-CCCccceEEcCCCC----------------EEEEECCC
Confidence 34444444310 12588899986543 2222221 12345678888874 33443333
Q ss_pred ----------CeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCccccc
Q 010051 309 ----------NSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKD 378 (519)
Q Consensus 309 ----------~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 378 (519)
+.|.++|..+++....+..........++|+|++++|+++.. .|.+||..++++........ ..
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~----~~ 266 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEF----RD 266 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCC----CS
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecC----CC
Confidence 789999999998776665312346899999999999988765 89999998776532111111 02
Q ss_pred CCCCcccccCC-ccEEEee----cCCcee-eecCC
Q 010051 379 ENKSPLVTKSE-DMIIEAS----TNDKLV-TAETK 407 (519)
Q Consensus 379 ~~~~~~~~s~~-~~~l~~~----~~d~~i-~~~~~ 407 (519)
.....++++|+ +.+.++. ..++.| +++..
T Consensus 267 ~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 267 TKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 45667899984 5555554 334444 55544
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.56 E-value=2.9e-11 Score=108.42 Aligned_cols=198 Identities=10% Similarity=-0.017 Sum_probs=131.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEE-ecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCcc
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQI-LDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSK 180 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 180 (519)
....+..+++.++|..+++...++.|.+||. +++.... +..+...+..++++++++.+++...++.|..||. +++..
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 3456889999999987777777889999998 6654332 2334457899999999987777766789999988 44311
Q ss_pred ccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCC
Q 010051 181 GVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDL 260 (519)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~ 260 (519)
.. ........+..++++++|..+++.... +.+.+|+. +.
T Consensus 175 ~~------------------------------~~~~~~~~~~~i~~~~~g~l~v~~~~~----------~~i~~~~~-~g 213 (299)
T 2z2n_A 175 EF------------------------------KIPTPASGPVGITKGNDDALWFVEIIG----------NKIGRITT-SG 213 (299)
T ss_dssp EE------------------------------ECSSTTCCEEEEEECTTSSEEEEETTT----------TEEEEECT-TC
T ss_pred Ee------------------------------eCCCCCCcceeEEECCCCCEEEEccCC----------ceEEEECC-CC
Confidence 00 000112346689999999876665444 47777877 33
Q ss_pred CcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEe-ccccccEEEEEEc
Q 010051 261 SRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILA-GLHYAAITDIAWS 339 (519)
Q Consensus 261 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~i~~~~~s 339 (519)
.........+...+..++++++| +++++...++.|.+||. ++. +..+. ..+...+.++++
T Consensus 214 ~~~~~~~~~~~~~~~~i~~~~~g----------------~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~- 274 (299)
T 2z2n_A 214 EITEFKIPTPNARPHAITAGAGI----------------DLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF- 274 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECSTT----------------CEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-
T ss_pred cEEEEECCCCCCCceeEEECCCC----------------CEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-
Confidence 22222233445678899999987 33444445678999998 444 33332 114567899999
Q ss_pred CCCCEEEEEeCCCcEEEEEecCC
Q 010051 340 NNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 340 ~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
++|+++++.. .+.|..++..+.
T Consensus 275 ~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 275 DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp CSSCEEEEET-TTEEEEEEEC--
T ss_pred cCCCEEEEec-CCcEEEEEcCcc
Confidence 8888777655 577777787654
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=3.1e-12 Score=112.96 Aligned_cols=232 Identities=10% Similarity=0.005 Sum_probs=151.1
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccc
Q 010051 105 DVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVE 183 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 183 (519)
...+++++++|+.++ +.+.++.|.+||..++........+...+.+++++++++++++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 788999999998666 446788999999766543322223335678899999988666555 889999997664321000
Q ss_pred cccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcc
Q 010051 184 KMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRP 263 (519)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~ 263 (519)
......+..++++|+|+.+++.... +.|.+|+......
T Consensus 104 -------------------------------~~~~~~p~~i~~~~~g~l~v~~~~~----------~~i~~~~~~~~~~- 141 (270)
T 1rwi_B 104 -------------------------------FDGLNYPEGLAVDTQGAVYVADRGN----------NRVVKLAAGSKTQ- 141 (270)
T ss_dssp -------------------------------CCSCSSEEEEEECTTCCEEEEEGGG----------TEEEEECTTCCSC-
T ss_pred -------------------------------cCCcCCCcceEECCCCCEEEEECCC----------CEEEEEECCCcee-
Confidence 0011346789999999866664443 5777886543221
Q ss_pred cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCC
Q 010051 264 ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNAR 343 (519)
Q Consensus 264 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 343 (519)
..........+..++++|+| +++++...++.|.+||............ +...+..++++++|.
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g----------------~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~g~ 204 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSG----------------NVYVTDTDNNRVVKLEAESNNQVVLPFT-DITAPWGIAVDEAGT 204 (270)
T ss_dssp EECCCCSCCSCCCEEECTTC----------------CEEEEEGGGTEEEEECTTTCCEEECCCS-SCCSEEEEEECTTCC
T ss_pred EeeccccCCCceeEEEeCCC----------------CEEEEECCCCEEEEEecCCCceEeeccc-CCCCceEEEECCCCC
Confidence 11122233456788999887 4455555678999999887654433333 346789999999998
Q ss_pred EEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee
Q 010051 344 YLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV 402 (519)
Q Consensus 344 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i 402 (519)
++++...++.|.+|+....... . .... ....+..++++++|.++++...++.|
T Consensus 205 l~v~~~~~~~v~~~~~~~~~~~-~--~~~~---~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 205 VYVTEHNTNQVVKLLAGSTTST-V--LPFT---GLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp EEEEETTTSCEEEECTTCSCCE-E--CCCC---SCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred EEEEECCCCcEEEEcCCCCcce-e--eccC---CCCCceeEEECCCCCEEEEECCCCEE
Confidence 7777777889999998654321 1 1110 12356788999999877777766666
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=1.1e-11 Score=115.77 Aligned_cols=196 Identities=11% Similarity=0.048 Sum_probs=126.0
Q ss_pred EEEcCCCCEEEEEeCCC--eEEEEEcCCCceEEEe----cccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCcccc
Q 010051 109 LQWSTDGAFLLSGSVDN--SCIIWDVNKGSVLQIL----DAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGV 182 (519)
Q Consensus 109 ~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 182 (519)
++|+++++.|+++..++ .|++|+...+.....+ ......+.+++++|++..|+.+..++.|..||..+......
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 89999999999888766 8999998776554444 22445678899999655666677788999999876531100
Q ss_pred ccccceeeEEEeccCcccccCCccccceeeecCCCccee-eEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 183 EKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFF-RRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
.... ......... ..++|+|++..|+++... .+.|+.|+....
T Consensus 256 -----------~~~~---------------~~g~~~~~P~~~ia~~p~~g~lyv~d~~---------~~~I~~~~~~g~- 299 (409)
T 3hrp_A 256 -----------KQLE---------------LSGSLGTNPGPYLIYYFVDSNFYMSDQN---------LSSVYKITPDGE- 299 (409)
T ss_dssp -----------EECC---------------CCSCCCCSSCCEEEEETTTTEEEEEETT---------TTEEEEECTTCC-
T ss_pred -----------eccc---------------ccCCCCCCccccEEEeCCCCEEEEEeCC---------CCEEEEEecCCC-
Confidence 0000 000000111 289999965555544322 156777765422
Q ss_pred cccccCCCC---------------CCCeEEEEEcCCcccccccCCCCcccccceEEEEEe-cCCeEEEEeCCCCCceEEE
Q 010051 262 RPALQLPGA---------------SKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA-TLNSLYIYDTESVPPIAIL 325 (519)
Q Consensus 262 ~~~~~~~~~---------------~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~-~d~~i~vwd~~~~~~~~~~ 325 (519)
...+.++ -.....++++|+| +++++-. .++.|+.|++.++.. ..+
T Consensus 300 --~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG----------------~lyvad~~~~~~I~~~~~~~G~v-~~~ 360 (409)
T 3hrp_A 300 --CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG----------------NFYIVDGFKGYCLRKLDILDGYV-STV 360 (409)
T ss_dssp --EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC----------------CEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred --EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC----------------CEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence 1111111 2347789999988 4455555 678999999877763 444
Q ss_pred eccc---------------cccEEEEEEcCCCCEEEEEeCCCcEEEEEec
Q 010051 326 AGLH---------------YAAITDIAWSNNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 326 ~~~~---------------~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~ 360 (519)
.+ + -.....++++++|.++++-..++.|+.++++
T Consensus 361 ~g-~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 361 AG-QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EE-CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred eC-CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 43 3 2458899999999888888888889888763
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=2e-11 Score=109.20 Aligned_cols=231 Identities=12% Similarity=0.092 Sum_probs=146.8
Q ss_pred CCCCCEEEEEEecCCC-EEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCC
Q 010051 11 HDTKPVLTLDFHPISG-LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTET 89 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~-~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~ 89 (519)
.+..---+..|+|++. ++++...++.|+.||..+++.. .|.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--------------------------------~~~------ 51 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--------------------------------RVT------ 51 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE--------------------------------EEE------
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE--------------------------------EEe------
Confidence 3445567889998654 5556666788888887655320 111
Q ss_pred cccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc----cccCeEEEEEcCCCCeEEEeeC
Q 010051 90 GQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA----HFHYVQGVAWDPLSKYVASLSS 165 (519)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~~~~~ 165 (519)
....+.+++++++|++++ +. ++.|.+||..+++....... ....+..++++|+|+++++...
T Consensus 52 ------------~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~ 117 (297)
T 3g4e_A 52 ------------MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMA 117 (297)
T ss_dssp ------------CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEE
T ss_pred ------------CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCC
Confidence 234588999999999554 44 56799999988865433221 1235788999999996665432
Q ss_pred C---------CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEe
Q 010051 166 D---------RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVP 236 (519)
Q Consensus 166 d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~ 236 (519)
. ..-.+|.+....... .. . ........++|+|+++.|+++
T Consensus 118 ~~~~~~~~~~~~~~l~~~d~~g~~~---------~~-------------------~---~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 118 EETAPAVLERHQGALYSLFPDHHVK---------KY-------------------F---DQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp CCSBTTBCCTTCEEEEEECTTSCEE---------EE-------------------E---EEESBEEEEEECTTSCEEEEE
T ss_pred cccccccccCCCcEEEEEECCCCEE---------EE-------------------e---eccccccceEEcCCCCEEEEe
Confidence 1 223455443321000 00 0 001234689999999988665
Q ss_pred cCCcceeeeecccceEEEEecc-CCCc-----ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCe
Q 010051 237 AGSYKISSMSESINSAYIFSRK-DLSR-----PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNS 310 (519)
Q Consensus 237 ~~~~~~~~~~~~~~~i~i~~~~-~~~~-----~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~ 310 (519)
... .+.|++|++. .... ....+..+......+++.++| ++.++....+.
T Consensus 167 ~~~---------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G----------------~lwva~~~~~~ 221 (297)
T 3g4e_A 167 DSL---------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG----------------KLWVACYNGGR 221 (297)
T ss_dssp EGG---------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS----------------CEEEEEETTTE
T ss_pred cCC---------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC----------------CEEEEEcCCCE
Confidence 432 2578888863 1111 122233333456788888887 44566666788
Q ss_pred EEEEeCCCCCceEEEeccccccEEEEEEc-CCCCEEEEEeC
Q 010051 311 LYIYDTESVPPIAILAGLHYAAITDIAWS-NNARYLALSSQ 350 (519)
Q Consensus 311 i~vwd~~~~~~~~~~~~~~~~~i~~~~~s-~~g~~l~~~~~ 350 (519)
|..||..+++.+..+.. +...+++++|. |+++.|++++.
T Consensus 222 v~~~d~~tG~~~~~i~~-p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKL-PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECTTTCCEEEEEEC-SSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEcCCCceEEEEEEC-CCCCceEEEEeCCCCCEEEEEcC
Confidence 99999999999888887 66789999998 88887766554
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=3.6e-12 Score=117.64 Aligned_cols=255 Identities=12% Similarity=0.032 Sum_probs=160.0
Q ss_pred CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceEEEeccc--
Q 010051 77 GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS----------VDNSCIIWDVNKGSVLQILDAH-- 144 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h-- 144 (519)
+.|.++|+.+. +.+..+..-..+ .++++|||++|+++. .++.|.++|..+++.+..+.-.
T Consensus 99 ~~VsVID~~t~------~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~ 170 (426)
T 3c75_H 99 TQQFVIDGSTG------RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDA 170 (426)
T ss_dssp EEEEEEETTTT------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CeEEEEECCCC------EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCc
Confidence 78999999887 666666544444 899999999988876 3678999999999988776421
Q ss_pred -----ccCeEEEEEcCCCCeEEEeeC--CCeEEEEecCCCCcccccccccee---------eEEEeccCcccccCCcccc
Q 010051 145 -----FHYVQGVAWDPLSKYVASLSS--DRTCRIYANRPTKSKGVEKMNYVC---------QHVITKAGQHSTDDSKSAK 208 (519)
Q Consensus 145 -----~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 208 (519)
......+.|+|++++|+++.. ++.|.+.|+.+.+........... ...+...+...........
T Consensus 171 ~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 171 PRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp CCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 123457899999999998874 578999999998754433332110 0111112211111111111
Q ss_pred ce-----eeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCccc----ccCCC-------CCC
Q 010051 209 NH-----LFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA----LQLPG-------ASK 272 (519)
Q Consensus 209 ~~-----~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~----~~~~~-------~~~ 272 (519)
.. .+..... .....+.|++++..++..+.. +.+++.|.......+ ..... ...
T Consensus 251 v~~~~~~~~~v~~~-p~~~~~~~~~dg~~~~~~s~~----------g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 251 TKVTNTEVFHTEDE-LLINHPAFSLRSGRLVWPTYT----------GKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp CEEEECCCCSCTTS-CBCSCCEECTTTCEEEEEBTT----------SEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred EEEEeeeeeccCCC-ceeeEeeecCCCCEEEEEeCC----------CcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 00 0000000 011235667777776665544 567777764322100 00000 001
Q ss_pred CeEEEEEcCCcccccccCCCCcccccceEEEEEe----------cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCC
Q 010051 273 PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA----------TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNA 342 (519)
Q Consensus 273 ~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g 342 (519)
....++++|++.. ++... ..+.|.++|+.+.+.+..+.. ......+.|+|||
T Consensus 320 g~~~va~s~dg~r----------------lyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--g~~P~gia~spDg 381 (426)
T 3c75_H 320 GWQQTAYHRQSDR----------------IYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--GHEIDSINVSQDA 381 (426)
T ss_dssp SSSCEEEEGGGTE----------------EEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECCSS
T ss_pred CceeeEEcCCCCE----------------EEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--CCCcCeEEEccCC
Confidence 1123678888744 33322 135799999999999999875 3458899999999
Q ss_pred C-EEEEEe-CCCcEEEEEecCCccccee
Q 010051 343 R-YLALSS-QDGYCTLVEFENDELGIPI 368 (519)
Q Consensus 343 ~-~l~~~~-~dg~i~vwd~~~~~~~~~~ 368 (519)
+ +|+++. .++.|.|+|+.+.+....+
T Consensus 382 ~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 382 EPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp SCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9 888887 5899999999998765554
No 206
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=2.8e-12 Score=117.36 Aligned_cols=263 Identities=10% Similarity=0.026 Sum_probs=161.6
Q ss_pred CCEEEEEEecCCCEEEEEc--CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC--------------C
Q 010051 14 KPVLTLDFHPISGLLATGG--ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG--------------G 77 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------------~ 77 (519)
..+..++++|+|+++++.. .++.++||.+.+++. ..++.. ......+-..+..+++.+++ .
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~--~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQ--SGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCC--CSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCc--ccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 7899999999999988863 234366776654432 222211 11122355677888887763 4
Q ss_pred eEEEEEcccCCCcccceeeeccc------cCCCCeEEEEEcCCCCEEE-EEe---CCCeEEEEEcCCCceEEEecccccC
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLS------FHRKDVLDLQWSTDGAFLL-SGS---VDNSCIIWDVNKGSVLQILDAHFHY 147 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~-~~~---~dg~i~vwd~~~~~~~~~~~~h~~~ 147 (519)
.|.+||+.++ +.+..+. .+...+..+++++++.+++ +.. .++.|.+||+.+++..+.+..|...
T Consensus 94 ~i~~~d~~tg------~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 94 KLVAWDTLNN------QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp EEEEEETTTT------EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred eEEEEECCCC------eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 6777777655 2222221 2334568999998655554 444 5789999999988877766654321
Q ss_pred eE-EEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEE
Q 010051 148 VQ-GVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAW 226 (519)
Q Consensus 148 v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 226 (519)
.. ...+.+++..+.+.+.+|.++.|.. .+..++|
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~---------------------------------------------~~~gia~ 202 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHL---------------------------------------------GVNGIVL 202 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCC---------------------------------------------CEEEEEE
T ss_pred cccccceeECCEEEEeccCCCceeceec---------------------------------------------ccceeEe
Confidence 11 1334456767777777777766531 1347999
Q ss_pred ccCCCeEEEecCCcceeeeecccceEEEEeccCCCc-------ccc--cCCCCCCCeEEEEEcCCcccccccCCCCcccc
Q 010051 227 SPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-------PAL--QLPGASKPVVAVRFCPLAFNLRESNSAGFFKL 297 (519)
Q Consensus 227 sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-------~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~ 297 (519)
+|+|+.|+++.... ..++.++...... ... ...++......++++++|
T Consensus 203 s~dg~~ly~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G-------------- 259 (343)
T 2qe8_A 203 DAENEWLYLSPMHS---------TSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH-------------- 259 (343)
T ss_dssp CTTSCEEEEEESSC---------SEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC--------------
T ss_pred ccCCCEEEEEeCCC---------CeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC--------------
Confidence 99999888865442 3555555421100 000 011222334557777776
Q ss_pred cceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEE
Q 010051 298 PYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCT 355 (519)
Q Consensus 298 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~ 355 (519)
+++++...++.|.+||..+++........+....++++|+++|+++++.+..+.+.
T Consensus 260 --~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 260 --NIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSA 315 (343)
T ss_dssp --CEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSG
T ss_pred --CEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccc
Confidence 55677777889999998556543333321345689999999998888876554443
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.49 E-value=1.9e-11 Score=110.56 Aligned_cols=251 Identities=14% Similarity=0.135 Sum_probs=152.2
Q ss_pred CCCCeEEEEEcCCCCEEEE-------EeCCCeEEEEEcCCCceEEEec----ccccCeEEEEEcCC-CCeEEEeeCCCeE
Q 010051 102 HRKDVLDLQWSTDGAFLLS-------GSVDNSCIIWDVNKGSVLQILD----AHFHYVQGVAWDPL-SKYVASLSSDRTC 169 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~-------~~~dg~i~vwd~~~~~~~~~~~----~h~~~v~~~~~~~~-~~~l~~~~~dg~i 169 (519)
.-....+++|+++|..+++ +..++.|.+||..+++...... ++...+.+++++++ ++++++ +..+.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCE
Confidence 3446789999999987777 5778999999988887543222 24567899999998 664444 444578
Q ss_pred EEEecCCCCcccc-ccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcce-----e
Q 010051 170 RIYANRPTKSKGV-EKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKI-----S 243 (519)
Q Consensus 170 ~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~-----~ 243 (519)
.+||.. ++.... ... ........+..++++++|+.+++....... .
T Consensus 95 ~~~d~~-g~~~~~~~~~---------------------------~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKD---------------------------SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EEEETT-SCEEECCSBC---------------------------TTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred EEEeCC-CCEEEEEecc---------------------------CCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 899987 442111 000 000112346789999999877765432000 0
Q ss_pred eeecccceEEEEeccCCCcccccCCCCCCCeEEEEEc----CCcccccccCCCCcccccceEEEEEecCCeEEEEeCC-C
Q 010051 244 SMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFC----PLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE-S 318 (519)
Q Consensus 244 ~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~s----p~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~-~ 318 (519)
......+.++.|+.. .. ...+..+......++|+ |++..+ +++...++.|.+|++. +
T Consensus 147 ~~~~~~~~l~~~~~~--g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l---------------~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD--GQ-MIQVDTAFQFPNGIAVRHMNDGRPYQL---------------IVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp TTSSSCEEEEEECTT--SC-EEEEEEEESSEEEEEEEECTTSCEEEE---------------EEEETTTTEEEEEEEEET
T ss_pred cccCCCCeEEEECCC--CC-EEEeccCCCCcceEEEecccCCCCCEE---------------EEEECCCCeEEEEECCCC
Confidence 000011356666643 22 11122223346788888 887321 3333456889999976 3
Q ss_pred CCc-----eEEEecccc-ccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccE
Q 010051 319 VPP-----IAILAGLHY-AAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMI 392 (519)
Q Consensus 319 ~~~-----~~~~~~~~~-~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 392 (519)
+.. ...+.. +. ..+..++++++|+++++...++.|.+|+..+++....+..+ ...+.+++|++++..
T Consensus 209 g~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~------~~~~~~i~~~~dg~~ 281 (314)
T 1pjx_A 209 AKIENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP------FEKPSNLHFKPQTKT 281 (314)
T ss_dssp TEEEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS------SSCEEEEEECTTSSE
T ss_pred CccccceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC------CCCceeEEECCCCCE
Confidence 432 222222 32 56788999999998888878899999998755443333321 245678899999985
Q ss_pred EEeecCC--ceeeecC
Q 010051 393 IEASTND--KLVTAET 406 (519)
Q Consensus 393 l~~~~~d--~~i~~~~ 406 (519)
|..++.. ++..++.
T Consensus 282 l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 282 IFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEEETTTTEEEEEEC
T ss_pred EEEEeCCCCeEEEEeC
Confidence 5544433 4445543
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.48 E-value=3e-12 Score=128.76 Aligned_cols=248 Identities=10% Similarity=0.008 Sum_probs=150.9
Q ss_pred CCCCCEEEEEEecCCCEEEEEc-----CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcc
Q 010051 11 HDTKPVLTLDFHPISGLLATGG-----ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLH 85 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~ 85 (519)
+|...+..++|||||++||.+. ....|+|||+.+++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~----------------------------------- 170 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET----------------------------------- 170 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----------------------------------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-----------------------------------
Confidence 3556789999999999988432 235688888887763210
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC-------------CeEEEEEcCCCce----EEEecc-cccC
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD-------------NSCIIWDVNKGSV----LQILDA-HFHY 147 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------------g~i~vwd~~~~~~----~~~~~~-h~~~ 147 (519)
.+. ......++|+ ||+.|+.++.+ ..|++|++.++.. +..... |...
T Consensus 171 ------------~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~ 235 (693)
T 3iuj_A 171 ------------PLK--DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR 235 (693)
T ss_dssp ------------EEE--EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCS
T ss_pred ------------ccC--CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeE
Confidence 000 0001345677 77777776665 3499999987652 333333 4456
Q ss_pred eEEEEEcCCCCeEEEeeC----CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeE
Q 010051 148 VQGVAWDPLSKYVASLSS----DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRR 223 (519)
Q Consensus 148 v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 223 (519)
+..+.|+|++++|+.... ...|.++|+.++.... ..+. ........
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~---------~~l~---------------------~~~~~~~~ 285 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL---------LTVQ---------------------GDLDADVS 285 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC---------EEEE---------------------CSSSSCEE
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce---------EEEe---------------------CCCCceEE
Confidence 788999999998855432 3589999987653110 0000 00111222
Q ss_pred EEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc-ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEE
Q 010051 224 LAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLI 302 (519)
Q Consensus 224 ~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~ 302 (519)
. |+++|..|++.+... .....|+.+++..... ....+..+...+. .|++++..| +
T Consensus 286 ~-~~~~g~~l~~~t~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~l---------------v 341 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRD------APNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYL---------------F 341 (693)
T ss_dssp E-EEEETTEEEEEECTT------CTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEE---------------E
T ss_pred E-EeccCCEEEEEECCC------CCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEE---------------E
Confidence 2 677777777665432 1235788898876432 1223344444454 888887443 3
Q ss_pred EEEecCC--eEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCC----CcEEEEEecCCc
Q 010051 303 FAIATLN--SLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQD----GYCTLVEFENDE 363 (519)
Q Consensus 303 ~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~d----g~i~vwd~~~~~ 363 (519)
++...++ .|++|++..+ ....+.....+.+..+.+++++..|+....+ +.|..||+.+++
T Consensus 342 ~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 342 AEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 3333343 7899998854 4444443245668888899998877665444 789999987764
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.47 E-value=1.9e-10 Score=105.84 Aligned_cols=255 Identities=9% Similarity=-0.018 Sum_probs=149.9
Q ss_pred eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceEEEeccc---
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS----------VDNSCIIWDVNKGSVLQILDAH--- 144 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h--- 144 (519)
.|.++|..++ +.+..+.....+ .++++|||++|+.+. .++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D~~t~------~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~ 119 (373)
T 2mad_H 48 QQWVLDAGSG------SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP 119 (373)
T ss_pred EEEEEECCCC------eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcc
Confidence 7889998876 455555433333 999999999999886 3678999999998877766432
Q ss_pred ----ccCeEEEEEcCCCCeEEEeeC--CCeEEEEecCCCCcccc-ccccceeeEEEeccCcccccCCccccceeeecCCC
Q 010051 145 ----FHYVQGVAWDPLSKYVASLSS--DRTCRIYANRPTKSKGV-EKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETL 217 (519)
Q Consensus 145 ----~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (519)
......+.|+|+|++|+++.. ++.|.++| .+++.... ...
T Consensus 120 ~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-------------------------------- 166 (373)
T 2mad_H 120 RFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-------------------------------- 166 (373)
T ss_pred ccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--------------------------------
Confidence 123458999999999998874 57899999 87753211 111
Q ss_pred cceeeEEEEccCCCeE-EEecCCcceeeeecccceEEEEeccCCCcccc-----cCCCCCCCeEEEEEcCCcccccccCC
Q 010051 218 PSFFRRLAWSPDGSFL-LVPAGSYKISSMSESINSAYIFSRKDLSRPAL-----QLPGASKPVVAVRFCPLAFNLRESNS 291 (519)
Q Consensus 218 ~~~i~~~~~sp~g~~l-~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~-----~~~~~~~~v~~~~~sp~~~~l~~~~~ 291 (519)
.. ++.+.|++... ++.+.+ +.+.+++. ....... .+.+.........|.+++.
T Consensus 167 ~~---~~~~~~~~~~~~~~~~~d----------g~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~------- 225 (373)
T 2mad_H 167 PT---CYHIHPGAPSTFYLLCAQ----------GGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSG------- 225 (373)
T ss_pred Cc---eEEEEeCCCceEEEEcCC----------CCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCC-------
Confidence 01 12333443222 222222 34444444 2211100 0011111112344555542
Q ss_pred CCcccccceEEEEEecCCeEEEEeCCCCCc--eEEEec---------cccccEEEEEEcCCCCEEEEEeC----------
Q 010051 292 AGFFKLPYRLIFAIATLNSLYIYDTESVPP--IAILAG---------LHYAAITDIAWSNNARYLALSSQ---------- 350 (519)
Q Consensus 292 ~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~--~~~~~~---------~~~~~i~~~~~s~~g~~l~~~~~---------- 350 (519)
.++..+..+.+.+.|+.+... +..+.. ........+.++|+++.|+++..
T Consensus 226 ---------~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~ 296 (373)
T 2mad_H 226 ---------RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAA 296 (373)
T ss_pred ---------EEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCC
Confidence 222223567888899875432 222210 01123445789999988877653
Q ss_pred CCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCcc-EEEeec-CCcee-eecCCCCC
Q 010051 351 DGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDM-IIEAST-NDKLV-TAETKEPD 410 (519)
Q Consensus 351 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~-~d~~i-~~~~~~~~ 410 (519)
.+.|.++|+.+.+....+... .....+.|+|||+ +++++. .++.+ +++.....
T Consensus 297 ~~~V~VID~~t~~vv~~i~~g-------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 297 AKEVTSVTGLVGQTSSQISLG-------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CCeEEEEECCCCEEEEEEECC-------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 357999999888766555432 2468899999998 666665 34444 66655433
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=1.9e-10 Score=104.26 Aligned_cols=185 Identities=15% Similarity=0.007 Sum_probs=116.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc----cccCeEEEEEcCCCCeEEEeeC------CCeEEEEe
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA----HFHYVQGVAWDPLSKYVASLSS------DRTCRIYA 173 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd 173 (519)
..+.+++|+++|+++++. .+ .|.+||..+++....... ....+..++++|+|+++++... .+.|..++
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 468899999999876654 44 499999988875433221 1235889999999987665432 23444444
Q ss_pred cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEE
Q 010051 174 NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAY 253 (519)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~ 253 (519)
.++... .. ........++|+|+|+.++++... .+.|+
T Consensus 168 --~g~~~~----------~~----------------------~~~~~~~~i~~s~dg~~lyv~~~~---------~~~I~ 204 (326)
T 2ghs_A 168 --KGKVTK----------LF----------------------ADISIPNSICFSPDGTTGYFVDTK---------VNRLM 204 (326)
T ss_dssp --TTEEEE----------EE----------------------EEESSEEEEEECTTSCEEEEEETT---------TCEEE
T ss_pred --CCcEEE----------ee----------------------CCCcccCCeEEcCCCCEEEEEECC---------CCEEE
Confidence 221100 00 001224579999999987765432 15788
Q ss_pred EEecc--CC-C----cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEe
Q 010051 254 IFSRK--DL-S----RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILA 326 (519)
Q Consensus 254 i~~~~--~~-~----~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~ 326 (519)
+|+.. +. . ..+..+.........+++.++| ++.++...++.|.+|+. +++.+..+.
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G----------------~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG----------------HIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS----------------CEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC----------------CEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 88875 22 1 0111222233456677888776 44555555678999998 577777776
Q ss_pred ccccccEEEEEEc-CCCCEEEEEeCC
Q 010051 327 GLHYAAITDIAWS-NNARYLALSSQD 351 (519)
Q Consensus 327 ~~~~~~i~~~~~s-~~g~~l~~~~~d 351 (519)
. +...+++++|+ ++++.|++++..
T Consensus 268 ~-~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 268 V-PGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp C-SCSBEEEEEEESTTSCEEEEEEBC
T ss_pred C-CCCCcEEEEEecCCCCEEEEEecC
Confidence 6 56679999998 888877655543
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.45 E-value=3.6e-10 Score=101.31 Aligned_cols=194 Identities=9% Similarity=0.008 Sum_probs=126.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEE-EecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccc
Q 010051 103 RKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQ-ILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKG 181 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 181 (519)
...+.++++.++|+++++...++.|..||.. ++... .+......+.++++.++++++++...++.|..|+. .++...
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~ 180 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE 180 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE
Confidence 3568999999999877777668899999987 65442 23334467899999999986666666788999987 332110
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
+........+..++++++|..+++.... +.+.+|+.. ..
T Consensus 181 ------------------------------~~~~~~~~~~~~i~~d~~g~l~v~~~~~----------~~i~~~~~~-g~ 219 (300)
T 2qc5_A 181 ------------------------------YPLPTNAAAPVGITSGNDGALWFVEIMG----------NKIGRITTT-GE 219 (300)
T ss_dssp ------------------------------EECSSTTCCEEEEEECTTSSEEEEETTT----------TEEEEECTT-CC
T ss_pred ------------------------------eeCCCCCCCcceEEECCCCCEEEEccCC----------CEEEEEcCC-Cc
Confidence 0000112346789999999877665444 467777762 22
Q ss_pred cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEE-EeccccccEEEEEEcC
Q 010051 262 RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAI-LAGLHYAAITDIAWSN 340 (519)
Q Consensus 262 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~i~~~~~s~ 340 (519)
.....+......+.++++.++| ++.++...++.|..|+. ++..... +.. ....+.++++++
T Consensus 220 ~~~~~~~~~~~~~~~i~~d~~g----------------~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-~~~~~~~i~~~~ 281 (300)
T 2qc5_A 220 ISEYDIPTPNARPHAITAGKNS----------------EIWFTEWGANQIGRITN-DNTIQEYQLQT-ENAEPHGITFGK 281 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTT----------------CEEEEETTTTEEEEECT-TSCEEEEECCS-TTCCCCCEEECT
T ss_pred EEEEECCCCCCCceEEEECCCC----------------CEEEeccCCCeEEEECC-CCcEEEEECCc-cCCccceeEeCC
Confidence 1122233345668899999987 33444445678999998 4443322 222 345688999999
Q ss_pred CCCEEEEEeCCCcEEEEEe
Q 010051 341 NARYLALSSQDGYCTLVEF 359 (519)
Q Consensus 341 ~g~~l~~~~~dg~i~vwd~ 359 (519)
+|+++++.. . .|..++.
T Consensus 282 ~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 282 DGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TSCEEEECS-S-EEEEEEE
T ss_pred CCCEEEEcc-C-ceEEeCC
Confidence 998666554 4 6666664
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=2.5e-12 Score=116.93 Aligned_cols=119 Identities=11% Similarity=0.025 Sum_probs=86.5
Q ss_pred CEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccce
Q 010051 15 PVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWK 94 (519)
Q Consensus 15 ~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~ 94 (519)
++..|++++...+|++|+.++ ++||++........- .... | +
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~-----------~~~~-----~---------------------~ 80 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITS-----------DSTP-----L---------------------T 80 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHS-----------SSCC-----C---------------------C
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcc-----------cccc-----c---------------------c
Confidence 699999999999999999885 777987654311100 0000 0 1
Q ss_pred eeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEec
Q 010051 95 VLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYAN 174 (519)
Q Consensus 95 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 174 (519)
.... ..+.. |+.++| |+++|+++ .++.|++||+.+.........|...+.++.+.+. .+++++.||.|.+||+
T Consensus 81 ~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 81 FKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDL 153 (388)
T ss_dssp CSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEET
T ss_pred ceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEc
Confidence 1011 12455 999999 89999999 8899999999887666666777788888887754 3888899999999999
Q ss_pred CCCC
Q 010051 175 RPTK 178 (519)
Q Consensus 175 ~~~~ 178 (519)
..+.
T Consensus 154 ~~~~ 157 (388)
T 1xip_A 154 RTKS 157 (388)
T ss_dssp TTCC
T ss_pred cCCc
Confidence 8653
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.44 E-value=6.1e-12 Score=126.48 Aligned_cols=236 Identities=16% Similarity=0.127 Sum_probs=147.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-----CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCe--------
Q 010051 102 HRKDVLDLQWSTDGAFLLSGS-----VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRT-------- 168 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~-------- 168 (519)
|...+..++|||||++||.+. ....|++||+.+++.+... .+......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 556788999999999988543 3357999999999865431 111113578899 9999988887743
Q ss_pred -----EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCC-CcceeeEEEEccCCCeEEEecCCcce
Q 010051 169 -----CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDET-LPSFFRRLAWSPDGSFLLVPAGSYKI 242 (519)
Q Consensus 169 -----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~~~~~~~~~ 242 (519)
|++|++.+..... ..++.... +...+..+.|+|||++|++.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~---------------------------~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-- 255 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDD---------------------------RLVFGAIPAQHHRYVGATVTEDDRFLLISAANS-- 255 (693)
T ss_dssp CCCCEEEEEETTSCGGGC---------------------------EEEESCSGGGCCSEEEEEECTTSCEEEEEEESS--
T ss_pred CCCcEEEEEECCCCcccc---------------------------eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC--
Confidence 8888876653210 11122222 234466899999999998765431
Q ss_pred eeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec---CCeEEEEeCCCC
Q 010051 243 SSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT---LNSLYIYDTESV 319 (519)
Q Consensus 243 ~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~---d~~i~vwd~~~~ 319 (519)
...+.++++++.........+..+....... ++++|..+ ++.... .+.|..+++.++
T Consensus 256 ----~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l---------------~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 256 ----TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTL---------------YLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp ----SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEE---------------EEEECTTCTTCEEEEEETTSC
T ss_pred ----CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEE---------------EEEECCCCCCCEEEEEeCCCC
Confidence 1225899999876543444555555555554 56666433 333322 368999999887
Q ss_pred Cc--eEEEeccccccEEEEEEcCCCCEEEEEeCCC---cEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEE
Q 010051 320 PP--IAILAGLHYAAITDIAWSNNARYLALSSQDG---YCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIE 394 (519)
Q Consensus 320 ~~--~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 394 (519)
.. ...+.. |...+. .|++++++|+....++ .|++|++..+.. ..+.+++ ...+..+.+++++..|+
T Consensus 316 ~~~~~~~l~~-~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~p~-----~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 316 GPAHWRDLIP-ERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-REVALPG-----LGSVSGFNGKHDDPALY 386 (693)
T ss_dssp CGGGCEEEEC-CCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-EEECCSS-----SSEEEECCCCTTCSCEE
T ss_pred CccccEEEec-CCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-EEeecCC-----CceEEeeecCCCCCEEE
Confidence 65 344544 555554 8999999887766543 688888775432 2222221 12345667778876665
Q ss_pred eec
Q 010051 395 AST 397 (519)
Q Consensus 395 ~~~ 397 (519)
...
T Consensus 387 ~~~ 389 (693)
T 3iuj_A 387 FGF 389 (693)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.43 E-value=8.4e-11 Score=105.18 Aligned_cols=241 Identities=9% Similarity=0.026 Sum_probs=148.7
Q ss_pred CCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCcc
Q 010051 102 HRKDVLDLQWSTDGA-FLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSK 180 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 180 (519)
+..-..+..|++++. ++++...++.|+.||..++.. ..+. ....+.+++++++++++++ . ++.|.+||..+++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 334457899999655 555556688999999988765 3332 3467899999999995554 4 567999998765421
Q ss_pred ccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcce-eeeecccceEEEEeccC
Q 010051 181 GVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKI-SSMSESINSAYIFSRKD 259 (519)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~-~~~~~~~~~i~i~~~~~ 259 (519)
..... ........+..++++|+|++++........ .......+.++.++..
T Consensus 87 ~~~~~---------------------------~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~- 138 (297)
T 3g4e_A 87 VLATV---------------------------DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD- 138 (297)
T ss_dssp EEEEC---------------------------CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-
T ss_pred EEEec---------------------------CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-
Confidence 11000 000112446789999999976654322100 0000111344444432
Q ss_pred CCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeC--CCCCce-----EEEecccccc
Q 010051 260 LSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDT--ESVPPI-----AILAGLHYAA 332 (519)
Q Consensus 260 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~--~~~~~~-----~~~~~~~~~~ 332 (519)
.. ...+.......+.++|+|+++.+ +++.+.++.|.+|++ .++... ..+.. +...
T Consensus 139 -g~-~~~~~~~~~~pngi~~spdg~~l---------------yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~ 200 (297)
T 3g4e_A 139 -HH-VKKYFDQVDISNGLDWSLDHKIF---------------YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-EEQI 200 (297)
T ss_dssp -SC-EEEEEEEESBEEEEEECTTSCEE---------------EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-GGCE
T ss_pred -CC-EEEEeeccccccceEEcCCCCEE---------------EEecCCCCcEEEEeccCCCCcccCcEEEEECCC-CCCC
Confidence 22 11122223456789999998432 345555789999987 455432 12222 3456
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCccccc-CCccEEEeecC
Q 010051 333 ITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTK-SEDMIIEASTN 398 (519)
Q Consensus 333 i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~l~~~~~ 398 (519)
...++++++|++.++...++.|.+||..++++...+..+. ..+++++|. |++..|..++.
T Consensus 201 p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~------~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 201 PDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV------DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS------SBEEEEEEESGGGCEEEEEEB
T ss_pred CCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC------CCceEEEEeCCCCCEEEEEcC
Confidence 7899999999888887778889999988776555554332 356788998 78766655443
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.43 E-value=8.7e-11 Score=105.54 Aligned_cols=241 Identities=7% Similarity=-0.020 Sum_probs=146.7
Q ss_pred CCeeEEecCCCCCEEEEEEecCCC-EEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEE
Q 010051 3 GGTLQINWHDTKPVLTLDFHPISG-LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELII 81 (519)
Q Consensus 3 ~~~~~~~~~h~~~V~~~~~sp~~~-~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~v 81 (519)
+..+..+..+.......+|+|+|+ +++++..++.|..|+. +++. ..
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~--------------------------------~~ 80 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV--------------------------------DV 80 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE--------------------------------EE
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE--------------------------------EE
Confidence 345556666677888999999998 5667777788888876 3321 00
Q ss_pred EEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEeccc----ccCeEEEEEcCCC
Q 010051 82 WKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAH----FHYVQGVAWDPLS 157 (519)
Q Consensus 82 w~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~ 157 (519)
| ..+...+..++++++|+++++...++.|.+|+.. ++........ ...+..++++++|
T Consensus 81 ~-----------------~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG 142 (305)
T 3dr2_A 81 L-----------------LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG 142 (305)
T ss_dssp E-----------------EESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTS
T ss_pred E-----------------eCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCC
Confidence 1 1133457889999999966665556789999985 5533222111 1346679999999
Q ss_pred CeEEE----eeC-------------CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcce
Q 010051 158 KYVAS----LSS-------------DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSF 220 (519)
Q Consensus 158 ~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (519)
+++++ +.. .+.|..||..+++..... ....
T Consensus 143 ~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---------------------------------~~~~ 189 (305)
T 3dr2_A 143 AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---------------------------------DLDH 189 (305)
T ss_dssp CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---------------------------------EESS
T ss_pred CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---------------------------------cCCC
Confidence 98876 332 245666666544321100 0123
Q ss_pred eeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc--ccccCCCCCCCeEEEEEcCCcccccccCCCCccccc
Q 010051 221 FRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR--PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLP 298 (519)
Q Consensus 221 i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~ 298 (519)
...++|+|+++.|+++..... ....+.|++|++..... ..............+++.++|.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~----~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-------------- 251 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQ----GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-------------- 251 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC-------CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC--------------
T ss_pred CcceEEcCCCCEEEEEecCCc----CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC--------------
Confidence 457999999998877644310 00014677887753220 0000111122334566777663
Q ss_pred ceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCC
Q 010051 299 YRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDG 352 (519)
Q Consensus 299 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg 352 (519)
+.++.. +.|.+|+. .++.+..+.. +. .+.+++|+++++.|+.++.++
T Consensus 252 ---lwv~~~-~gv~~~~~-~g~~~~~~~~-~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 252 ---LWSSSG-TGVCVFDS-DGQLLGHIPT-PG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp ---EEECCS-SEEEEECT-TSCEEEEEEC-SS-CCCEEEECTTSCEEEEEETTE
T ss_pred ---EEEecC-CcEEEECC-CCCEEEEEEC-CC-ceeEEEEeCCCCEEEEEcCCe
Confidence 333333 34999998 4777777765 33 588999999998888887654
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.41 E-value=1.9e-10 Score=107.36 Aligned_cols=241 Identities=11% Similarity=0.060 Sum_probs=150.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCC--eEEEEecCCCCccc
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDR--TCRIYANRPTKSKG 181 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~ 181 (519)
.....|+|+++++++++...++.|++||+.++......... .... ++|+++++.|+++..++ .|.+|+........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46889999999987777777799999999888766555443 2233 99999999998888766 78888875432100
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeec-CCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHD-ETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDL 260 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~ 260 (519)
.+ -.. ......+..++++|++..|+++... +.|+.|+....
T Consensus 209 ----------~~------------------g~~~~~~~~~p~~iav~p~~g~lyv~d~~----------~~I~~~d~~~~ 250 (409)
T 3hrp_A 209 ----------RI------------------GQLGSTFSGKIGAVALDETEEWLYFVDSN----------KNFGRFNVKTQ 250 (409)
T ss_dssp ----------EE------------------EECCTTSCSCCCBCEECTTSSEEEEECTT----------CEEEEEETTTC
T ss_pred ----------Ee------------------eeccchhcCCcEEEEEeCCCCeEEEEECC----------CcEEEEECCCC
Confidence 00 000 0022445689999965556655443 57888887644
Q ss_pred Cccccc---CCCCCCCe--EEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccc------
Q 010051 261 SRPALQ---LPGASKPV--VAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLH------ 329 (519)
Q Consensus 261 ~~~~~~---~~~~~~~v--~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~------ 329 (519)
...... ..+..... ..++|+|++. .++++-...+.|+.|+.... +..+.+ +
T Consensus 251 ~~~~~~~~~~~g~~~~~P~~~ia~~p~~g---------------~lyv~d~~~~~I~~~~~~g~--~~~~~g-~~~~~g~ 312 (409)
T 3hrp_A 251 EVTLIKQLELSGSLGTNPGPYLIYYFVDS---------------NFYMSDQNLSSVYKITPDGE--CEWFCG-SATQKTV 312 (409)
T ss_dssp CEEEEEECCCCSCCCCSSCCEEEEETTTT---------------EEEEEETTTTEEEEECTTCC--EEEEEE-CTTCCSC
T ss_pred CEEEEecccccCCCCCCccccEEEeCCCC---------------EEEEEeCCCCEEEEEecCCC--EEEEEe-CCCCCCc
Confidence 321110 11222222 3899999532 34555556788999987643 333333 2
Q ss_pred ---------cccEEEEEEcCCCCEEEEEe-CCCcEEEEEecCCcccceeeecCCcc--------cccCCCCcccccCCcc
Q 010051 330 ---------YAAITDIAWSNNARYLALSS-QDGYCTLVEFENDELGIPISLSGNKV--------SKDENKSPLVTKSEDM 391 (519)
Q Consensus 330 ---------~~~i~~~~~s~~g~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~ 391 (519)
-.....++|+++|+++++-. .++.|+.|++.++.+....-..+... ........++++++|.
T Consensus 313 ~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~ 392 (409)
T 3hrp_A 313 QDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG 392 (409)
T ss_dssp BCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE
T ss_pred CCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC
Confidence 23478999999999777777 78999999977664321111100000 0123456688888877
Q ss_pred EEEeecCCcee
Q 010051 392 IIEASTNDKLV 402 (519)
Q Consensus 392 ~l~~~~~d~~i 402 (519)
++++....+.|
T Consensus 393 lyVad~~n~~I 403 (409)
T 3hrp_A 393 YWIAEAWGKAI 403 (409)
T ss_dssp EEEEESTTCEE
T ss_pred EEEEECCCCeE
Confidence 77776665554
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.35 E-value=6.6e-11 Score=107.49 Aligned_cols=247 Identities=9% Similarity=-0.095 Sum_probs=144.0
Q ss_pred eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceEEEeccc---
Q 010051 78 ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS----------VDNSCIIWDVNKGSVLQILDAH--- 144 (519)
Q Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h--- 144 (519)
.|.++|..+. +.+.++.....+ .+.++||+++|+++. .++.|.+||+.+++.+..+...
T Consensus 47 ~vsvID~~t~------~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~ 118 (368)
T 1mda_H 47 ENWVSCAGCG------VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP 118 (368)
T ss_dssp EEEEEETTTT------EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC
T ss_pred eEEEEECCCC------eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc
Confidence 7889998877 667766654555 799999999999886 3689999999999999887543
Q ss_pred ----ccCeEEEEEcCCCCeEEEeeC--CCeEEE--EecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCC
Q 010051 145 ----FHYVQGVAWDPLSKYVASLSS--DRTCRI--YANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDET 216 (519)
Q Consensus 145 ----~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (519)
......++++|||++++++.. ...+.+ +|+.+ ... .... .|......................+....
T Consensus 119 ~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~-i~v~-~~~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQL-TKSA-SCFHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEE-EECS-SCCCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceE-EECC-CceEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 123567899999999998875 457888 88866 111 1100 00000000000000000000000000000
Q ss_pred -----------------C-cceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcc-cccCCC--------
Q 010051 217 -----------------L-PSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRP-ALQLPG-------- 269 (519)
Q Consensus 217 -----------------~-~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~-~~~~~~-------- 269 (519)
. ..+. . ++++..++..+. +.+.+.|....... ...+.-
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-----------~~V~viD~~~~~~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-----------SSILQGDIPAAGATMKAAIDGNESGRKAD 259 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-----------SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-----------CEEEEEECCCCcceEEEEEEecccccccc
Confidence 0 0111 2 444444443322 36666776432111 111100
Q ss_pred --CCCCeEEEEEcCCcccccccCCCCcccccceEEEEE-e---c-----CCeEEEEeCCCCCceEEEeccccccEEEEEE
Q 010051 270 --ASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI-A---T-----LNSLYIYDTESVPPIAILAGLHYAAITDIAW 338 (519)
Q Consensus 270 --~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~-~---~-----d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~ 338 (519)
.......+.|+|++.. ++.+ . . ++.+.++|+.+++.+..+.. ......++|
T Consensus 260 ~~~p~g~~~v~~s~dg~~----------------lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--g~~p~gi~~ 321 (368)
T 1mda_H 260 NFRSAGFQMVAKLKNTDG----------------IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--GHDSDAIIA 321 (368)
T ss_dssp TEEECSSSCEEEETTTTE----------------EEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--EEEECEEEE
T ss_pred ccccCcceeeEEcCCCCE----------------EEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--CCCcceEEE
Confidence 0011112678998844 3332 2 1 23566999999999988876 336889999
Q ss_pred cCCCCE-EEEEe-CCCcEEEEEecCCcccceee
Q 010051 339 SNNARY-LALSS-QDGYCTLVEFENDELGIPIS 369 (519)
Q Consensus 339 s~~g~~-l~~~~-~dg~i~vwd~~~~~~~~~~~ 369 (519)
+|||++ +++.. .++.|.++|+.+.+....+.
T Consensus 322 s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 322 AQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp CCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred CCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 999984 55555 58999999999987655544
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.35 E-value=1.4e-10 Score=105.12 Aligned_cols=274 Identities=11% Similarity=0.030 Sum_probs=155.1
Q ss_pred EEEEecCCCEEEEEc----------CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCC----------
Q 010051 18 TLDFHPISGLLATGG----------ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGG---------- 77 (519)
Q Consensus 18 ~~~~sp~~~~la~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------- 77 (519)
.+++||||++|++++ .++.|.+||..+++....+....... .........++|+|++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r--~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPR--FLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC--CCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccc--cccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 499999999887765 36789999999998887764321000 00012334456666654
Q ss_pred -eEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceEEEeccc----ccCeE-E
Q 010051 78 -ELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK-GSVLQILDAH----FHYVQ-G 150 (519)
Q Consensus 78 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h----~~~v~-~ 150 (519)
.|.++|+.+. +.+..+.-. .. ...+....+.+++.+.||.+.+.++.+ ++.......+ ...+. .
T Consensus 160 ~~VsVID~~t~------~vv~tI~v~--g~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~ 230 (386)
T 3sjl_D 160 PAVGVVDLEGK------AFKRMLDVP--DC-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINH 230 (386)
T ss_dssp CEEEEEETTTT------EEEEEEECC--SE-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSC
T ss_pred CeEEEEECCCC------cEEEEEECC--Cc-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccc
Confidence 4555555554 444444321 11 223333456677888899999999876 5543221111 11221 2
Q ss_pred EEEc-CCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 151 VAWD-PLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 151 ~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
..|. ++|++++ .+.+|.+.+.|+.+........... +.. ......-.+.....++++|+
T Consensus 231 ~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~-----~~~--------------~~~~~g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 231 PAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA-----LTE--------------AERADGWRPGGWQQVAYHRA 290 (386)
T ss_dssp CEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES-----SCH--------------HHHHTTEEECSSSCEEEETT
T ss_pred ceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceec-----ccc--------------ccccccccCCCcceeeECCC
Confidence 3554 5665444 5668999999997654221111100 000 00000001122335788999
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEE-EecC
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFA-IATL 308 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~-~~~d 308 (519)
++.+++.........-....+.|.++|..+.........+ ..+..+++++|++. ++++ ...+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~---------------~ly~tn~~~ 353 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKP---------------LLYALSTGD 353 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSC---------------EEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCe---------------EEEEEcCCC
Confidence 9998886431100000011257899998765432222222 36778999999842 3444 4457
Q ss_pred CeEEEEeCCCCCceEEEeccccccEEEEEEcCC
Q 010051 309 NSLYIYDTESVPPIAILAGLHYAAITDIAWSNN 341 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~ 341 (519)
+.|.++|..+++.+..+.. .+.-+.|.+++|
T Consensus 354 ~~VsViD~~t~k~~~~i~~--~~~p~~l~~s~d 384 (386)
T 3sjl_D 354 KTLYIHDAESGEELRSVNQ--LGHGPQVITTAD 384 (386)
T ss_dssp TEEEEEETTTCCEEEEECC--CCSSCCEEEECC
T ss_pred CeEEEEECCCCcEEEEecC--CCCCceeEECCc
Confidence 8999999999999998875 344566677666
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.34 E-value=3.5e-10 Score=101.55 Aligned_cols=246 Identities=11% Similarity=0.033 Sum_probs=146.9
Q ss_pred cccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCC
Q 010051 99 LSFHRKDVLDLQWSTDGA-FLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPT 177 (519)
Q Consensus 99 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 177 (519)
+.........+.|+++|+ ++++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 333555678899999998 5566667899999998 554 34555566778999999999966665556789999875 3
Q ss_pred CccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEE----ecCCc---ceeeeecccc
Q 010051 178 KSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLV----PAGSY---KISSMSESIN 250 (519)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~----~~~~~---~~~~~~~~~~ 250 (519)
+...... . ........+..++++|+|+.+++ +.... .........+
T Consensus 117 ~~~~~~~----------~-----------------~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 117 QAHLLVG----------R-----------------YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp CEEEEEC----------E-----------------ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred CEEEEEe----------c-----------------cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence 2110000 0 00000123567999999997775 22110 0000001124
Q ss_pred eEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecC------CeEEEEeCCCCCce--
Q 010051 251 SAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATL------NSLYIYDTESVPPI-- 322 (519)
Q Consensus 251 ~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d------~~i~vwd~~~~~~~-- 322 (519)
.|+.|+....... .+. .....+.++|+|+++. ++.+... +.|++|++..+...
T Consensus 170 ~v~~~d~~~g~~~--~~~-~~~~p~gl~~spdg~~----------------lyv~~~~~~~~~~~~i~~~~~~~~~l~~~ 230 (305)
T 3dr2_A 170 SVYRLPPDGSPLQ--RMA-DLDHPNGLAFSPDEQT----------------LYVSQTPEQGHGSVEITAFAWRDGALHDR 230 (305)
T ss_dssp EEEEECSSSCCCE--EEE-EESSEEEEEECTTSSE----------------EEEEECCC---CCCEEEEEEEETTEEEEE
T ss_pred eEEEEcCCCCcEE--EEe-cCCCCcceEEcCCCCE----------------EEEEecCCcCCCCCEEEEEEecCCCccCC
Confidence 6777776433211 111 3345678999999854 3333332 68999998755411
Q ss_pred EEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee
Q 010051 323 AILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV 402 (519)
Q Consensus 323 ~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i 402 (519)
..+..........++++++|++.++ +.+ .|.+|+.. ++....+..+ ..+..++|++++..|..++.+++.
T Consensus 231 ~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~~~~~~~~-------~~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 231 RHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQLLGHIPTP-------GTASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp EEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCEEEEEECS-------SCCCEEEECTTSCEEEEEETTEEE
T ss_pred eEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCEEEEEECC-------CceeEEEEeCCCCEEEEEcCCeEE
Confidence 1111112334567899999995544 444 48888874 3322233221 247789999999888877777665
Q ss_pred e
Q 010051 403 T 403 (519)
Q Consensus 403 ~ 403 (519)
.
T Consensus 301 ~ 301 (305)
T 3dr2_A 301 M 301 (305)
T ss_dssp E
T ss_pred E
Confidence 3
No 220
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=2.2e-11 Score=110.75 Aligned_cols=187 Identities=14% Similarity=0.169 Sum_probs=128.6
Q ss_pred CeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCcccc-ccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEE
Q 010051 147 YVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGV-EKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLA 225 (519)
Q Consensus 147 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 225 (519)
.+..+++++...+|++|+.++ +.+|++...+.... ...... .. ....++. |+.++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~-------------------~~---~~~~lp~-V~~l~ 94 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLT-------------------FK---WEKEIPD-VIFVC 94 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCC-------------------CS---EEEECTT-EEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcccccccc-------------------ce---EEeeCCC-eeEEE
Confidence 688999999999999999885 55598754320000 000000 00 0112445 88999
Q ss_pred EccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE
Q 010051 226 WSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 226 ~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
| ++.+|+++ .+ +.+++||+..... ......+...+.++.+.+. .++++
T Consensus 95 f--d~~~L~v~-~~----------~~l~v~dv~sl~~-~~~~~~~~~~v~~i~~~~p------------------~~av~ 142 (388)
T 1xip_A 95 F--HGDQVLVS-TR----------NALYSLDLEELSE-FRTVTSFEKPVFQLKNVNN------------------TLVIL 142 (388)
T ss_dssp E--ETTEEEEE-ES----------SEEEEEESSSTTC-EEEEEECSSCEEEEEECSS------------------EEEEE
T ss_pred E--CCCEEEEE-cC----------CcEEEEEchhhhc-cCccceeecceeeEEecCC------------------CEEEE
Confidence 9 99999987 33 6899999876542 2334455667777776653 27778
Q ss_pred ecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc--cceeeecCCcc---cccCC
Q 010051 306 ATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL--GIPISLSGNKV---SKDEN 380 (519)
Q Consensus 306 ~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~---~~~~~ 380 (519)
..||.|.+||+.++.... +...|++++|||+| ++.|..||.+++|+....+. ...+..+.... .+...
T Consensus 143 ~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~ 215 (388)
T 1xip_A 143 NSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYS 215 (388)
T ss_dssp ETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSE
T ss_pred ECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCee
Confidence 899999999999887643 34579999999999 67899999999999988764 22332111000 13467
Q ss_pred CCcccccCCccEEEee
Q 010051 381 KSPLVTKSEDMIIEAS 396 (519)
Q Consensus 381 ~~~~~~s~~~~~l~~~ 396 (519)
+.++.|.+++.++++-
T Consensus 216 V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 216 PLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEESSSSEEEEEE
T ss_pred EEEEEEecCCeEEEEE
Confidence 8999999999988863
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.33 E-value=3.5e-10 Score=102.54 Aligned_cols=231 Identities=8% Similarity=-0.006 Sum_probs=140.0
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccc
Q 010051 105 DVLDLQWSTDGA-FLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVE 183 (519)
Q Consensus 105 ~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 183 (519)
-..+++|+|++. .+++...++.|..||..+++.. .+. ....+.+++|+++++++++. .+ .|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 356789999755 4556666889999999877643 332 34679999999998877654 44 4899998776421110
Q ss_pred cccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcc
Q 010051 184 KMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRP 263 (519)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~ 263 (519)
.. ........+..++++|+|++++....... ....+.++.++ + ..
T Consensus 126 ~~---------------------------~~~~~~~~~~~i~~d~~G~l~v~~~~~~~----~~~~~~l~~~~--~-g~- 170 (326)
T 2ghs_A 126 EL---------------------------ESDLPGNRSNDGRMHPSGALWIGTMGRKA----ETGAGSIYHVA--K-GK- 170 (326)
T ss_dssp CS---------------------------STTCTTEEEEEEEECTTSCEEEEEEETTC----CTTCEEEEEEE--T-TE-
T ss_pred eC---------------------------CCCCCCCCCCCEEECCCCCEEEEeCCCcC----CCCceEEEEEe--C-Cc-
Confidence 00 00011245778999999997665432100 00113555555 2 21
Q ss_pred cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC--CC-Cc-----eEEEeccccccEEE
Q 010051 264 ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE--SV-PP-----IAILAGLHYAAITD 335 (519)
Q Consensus 264 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~--~~-~~-----~~~~~~~~~~~i~~ 335 (519)
...+.........++|+|+++.+ +++...++.|.+|++. ++ .. +..+.. .......
T Consensus 171 ~~~~~~~~~~~~~i~~s~dg~~l---------------yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~-~~~~p~g 234 (326)
T 2ghs_A 171 VTKLFADISIPNSICFSPDGTTG---------------YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG-IKGGMDG 234 (326)
T ss_dssp EEEEEEEESSEEEEEECTTSCEE---------------EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT-SSSEEEE
T ss_pred EEEeeCCCcccCCeEEcCCCCEE---------------EEEECCCCEEEEEEcccccCCcccCceEEEECCC-CCCCCCe
Confidence 11121222356789999998432 3344456789999986 55 32 112222 3456788
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCccccc-CCccEEEeec
Q 010051 336 IAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTK-SEDMIIEAST 397 (519)
Q Consensus 336 ~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~l~~~~ 397 (519)
++++++|.++++...++.|.+|+. .++....+..+ ...+.+++|+ +++..|..++
T Consensus 235 i~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~------~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 235 SVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP------GKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS------CSBEEEEEEESTTSCEEEEEE
T ss_pred eEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC------CCCcEEEEEecCCCCEEEEEe
Confidence 999999988877766788999987 34333333321 2346788887 7776554443
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.24 E-value=3.4e-09 Score=105.76 Aligned_cols=80 Identities=10% Similarity=-0.015 Sum_probs=58.2
Q ss_pred CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCccccc
Q 010051 308 LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTK 387 (519)
Q Consensus 308 d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 387 (519)
+|.|+.||+.+++.+-.+.. + .++....++..+.++++++.||.|+.||..+++....+.+... .....+.|.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~-~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~-----~~~~p~ty~ 526 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPY-V-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASG-----VMAAPVTYS 526 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEE-S-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEEE
T ss_pred ceeEEEEECCCCCeEeEccC-C-CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCC-----cccCceEEE
Confidence 47899999999998887765 3 3344446667888999999999999999999976555544321 223456777
Q ss_pred CCccEEE
Q 010051 388 SEDMIIE 394 (519)
Q Consensus 388 ~~~~~l~ 394 (519)
.+|+..+
T Consensus 527 ~~G~qyv 533 (689)
T 1yiq_A 527 VDGEQYV 533 (689)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 8886443
No 223
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.23 E-value=2.6e-10 Score=107.62 Aligned_cols=286 Identities=11% Similarity=0.015 Sum_probs=176.7
Q ss_pred EEEEcCCCcEEEEEecCCccccccccccccc------------ccc------------cc------CcceeEEEEcc---
Q 010051 28 LATGGADYDIKIWLINSGEKQKKIPTASYQN------------SLS------------YH------GSAINILRFSP--- 74 (519)
Q Consensus 28 la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------------~~~------------~~------~~~v~~~~~~~--- 74 (519)
+.+|+..|.|+|+-+-+++.++.++.+.... .|. .+ .+....+..|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 5688899999999999999888876543211 010 00 11112233333
Q ss_pred --C----------CCeEEEEEcccCCCcccceeeecccc-CCCCeEEEEE-c-CCCCEEEEEe-----------------
Q 010051 75 --C----------GGELIIWKLHTTETGQAWKVLKNLSF-HRKDVLDLQW-S-TDGAFLLSGS----------------- 122 (519)
Q Consensus 75 --~----------~~~i~vw~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-s-~~~~~l~~~~----------------- 122 (519)
| ++.|.+.|+.+. ++...+.- ....+..+++ + |+++++++++
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~------~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVM------KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTT------EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCc------eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccc
Confidence 2 466777787766 44442221 2356888898 5 9999999885
Q ss_pred -CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCC---------------eEEEEecCCCCcccccccc
Q 010051 123 -VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDR---------------TCRIYANRPTKSKGVEKMN 186 (519)
Q Consensus 123 -~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg---------------~i~iwd~~~~~~~~~~~~~ 186 (519)
.++.+.++|..+.+.+..+.--. ....++++|+|+++++.+.+. .|.+.|....
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~--------- 241 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI--------- 241 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH---------
T ss_pred ccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce---------
Confidence 34689999999998887775322 346678999999998888653 1333322110
Q ss_pred ceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC-cc-c
Q 010051 187 YVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS-RP-A 264 (519)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~-~~-~ 264 (519)
..+.++|++... +.+.+.|..... .. +
T Consensus 242 -------------------------------------~~~v~~Gk~~~i--------------~~V~VID~~~~~~~~~~ 270 (595)
T 1fwx_A 242 -------------------------------------EKAIAAGDYQEL--------------NGVKVVDGRKEASSLFT 270 (595)
T ss_dssp -------------------------------------HHHHHHTCSEEE--------------TTEEEEECSGGGCCSSE
T ss_pred -------------------------------------eEeccCCCeeEE--------------CcEEEEeCcccCCceeE
Confidence 123345655443 357888887521 11 1
Q ss_pred ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCC------------ceEEEecccccc
Q 010051 265 LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVP------------PIAILAGLHYAA 332 (519)
Q Consensus 265 ~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~------------~~~~~~~~~~~~ 332 (519)
..++. .....++.++|||+++ ++++..+++|.++|+.+.+ ....+. -...
T Consensus 271 ~~Ipv-g~~PhGv~~sPDGk~v---------------~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG~g 332 (595)
T 1fwx_A 271 RYIPI-ANNPHGCNMAPDKKHL---------------CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LGLG 332 (595)
T ss_dssp EEEEE-ESSCCCEEECTTSSEE---------------EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CCSC
T ss_pred EEEec-CCCceEEEEcCCCCEE---------------EEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CCCC
Confidence 22221 1245679999999654 4555567899999998653 233333 2456
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEecCCc--------ccceeeecCCcc-cccCCCCcccccCCccEEEeecC
Q 010051 333 ITDIAWSNNARYLALSSQDGYCTLVEFENDE--------LGIPISLSGNKV-SKDENKSPLVTKSEDMIIEASTN 398 (519)
Q Consensus 333 i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~ 398 (519)
...++|+|+|...++.-.|++|.+||++... ....-.+.-+.. .+...-.....+|||++|++...
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 7889999999555567789999999998721 111112222221 11223355678999999988763
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.23 E-value=3.9e-09 Score=105.10 Aligned_cols=80 Identities=8% Similarity=-0.030 Sum_probs=59.2
Q ss_pred CeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccC
Q 010051 309 NSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKS 388 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 388 (519)
+.|..||+.+++.+-.+.. ..++....++.++.++++++.||.+++||..+++....+.+... .....+.|..
T Consensus 457 g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~-----~~~~p~~y~~ 529 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG-----VVAAPSTYMV 529 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC-----cccCCEEEEe
Confidence 7899999999998877763 44555566777888999999999999999999976665554321 2334566778
Q ss_pred CccEEEe
Q 010051 389 EDMIIEA 395 (519)
Q Consensus 389 ~~~~l~~ 395 (519)
+|+.++.
T Consensus 530 ~G~~~v~ 536 (677)
T 1kb0_A 530 DGRQYVS 536 (677)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8865544
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.19 E-value=3.2e-09 Score=98.07 Aligned_cols=265 Identities=9% Similarity=-0.021 Sum_probs=143.0
Q ss_pred cCCCEEEEEcC-C----CcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCe-------------------
Q 010051 23 PISGLLATGGA-D----YDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGE------------------- 78 (519)
Q Consensus 23 p~~~~la~~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------------------- 78 (519)
|++++++++.. + +.|.++|..+++.+.+++... .+ .++++|+++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~---------~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~ 150 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF---------LP--HPVAAEDGSFFAQASTVFERIARGKRTDY 150 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS---------SC--EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC---------CC--ceEECCCCCEEEEEeccccccccCCCCCE
Confidence 56776665544 2 699999999999887775321 22 6777777654
Q ss_pred EEEEEcccCCCcccceeeeccccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceEEEecccccCeE
Q 010051 79 LIIWKLHTTETGQAWKVLKNLSFH-------RKDVLDLQWSTDGAFLLSGSV--DNSCIIWDVNKGSVLQILDAHFHYVQ 149 (519)
Q Consensus 79 i~vw~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~h~~~v~ 149 (519)
|.++|..+. +.+..+.-. ......+.|+|||++|+++.. ++.|.+.|+.+++.+..+..-..
T Consensus 151 VsviD~~t~------~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--- 221 (426)
T 3c75_H 151 VEVFDPVTF------LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--- 221 (426)
T ss_dssp EEEECTTTC------CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---
T ss_pred EEEEECCCC------cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---
Confidence 455555444 333333211 123457899999999999874 57899999999998887754211
Q ss_pred EEEEcCCC-CeEEEeeCCCeEEEEecCCCCcccc----ccccc---eeeEEEeccCcccccCCccccceeeec-------
Q 010051 150 GVAWDPLS-KYVASLSSDRTCRIYANRPTKSKGV----EKMNY---VCQHVITKAGQHSTDDSKSAKNHLFHD------- 214 (519)
Q Consensus 150 ~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 214 (519)
....|++ ..+++.+.||.+.+.++..++.... ..... .....+...+.............++..
T Consensus 222 -~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v 300 (426)
T 3c75_H 222 -YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATF 300 (426)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEE
T ss_pred -eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEE
Confidence 1222222 3444455566655555533322100 00000 000000000000000000000011110
Q ss_pred ------C--------CCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEc
Q 010051 215 ------E--------TLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFC 280 (519)
Q Consensus 215 ------~--------~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~s 280 (519)
. ..+.....++++|+++++++.........-....+.|.++|..+... +..+.. ......+.|+
T Consensus 301 ~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv-v~~I~v-g~~P~gia~s 378 (426)
T 3c75_H 301 RAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER-INKIEL-GHEIDSINVS 378 (426)
T ss_dssp CCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEE-EEEECEEEEC
T ss_pred eeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE-EEEEEC-CCCcCeEEEc
Confidence 0 01112223789999998887642100000000125799999876532 333321 1247789999
Q ss_pred CCcccccccCCCCcccccceEEEEEe-cCCeEEEEeCCCCCceEEE
Q 010051 281 PLAFNLRESNSAGFFKLPYRLIFAIA-TLNSLYIYDTESVPPIAIL 325 (519)
Q Consensus 281 p~~~~l~~~~~~g~~~~~~~~~~~~~-~d~~i~vwd~~~~~~~~~~ 325 (519)
|||+. ++++.. .++.|.++|+.+++.+..+
T Consensus 379 pDg~~---------------~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 379 QDAEP---------------LLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CSSSC---------------EEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cCCCE---------------EEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99842 455555 5899999999999999887
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.16 E-value=4.5e-08 Score=89.28 Aligned_cols=224 Identities=11% Similarity=0.053 Sum_probs=134.1
Q ss_pred EEEccCCCeEEEEEcccCCCcccceeeeccc-------cCCCCeEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCc
Q 010051 70 LRFSPCGGELIIWKLHTTETGQAWKVLKNLS-------FHRKDVLDLQWSTDGAFLLSGSVD------NSCIIWDVNKGS 136 (519)
Q Consensus 70 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vwd~~~~~ 136 (519)
+.-+-.++.|.|+|+.+.... .+....+. ........+..+|+| .++++..+ |.|.++|..+++
T Consensus 99 ~v~~l~s~~I~viD~~t~p~~--p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 99 IVPGLRSSRIYIIDTKPNPRE--PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEBTTTCCEEEEECCSCTTS--CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred EEccCCCCeEEEEECCCCCCC--ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 333344688999998654221 23333331 011245667888999 66666555 789999999999
Q ss_pred eEEEeccccc---CeEEEEEcCCCCeEEEee-------------------CCCeEEEEecCCCCccccccccceeeEEEe
Q 010051 137 VLQILDAHFH---YVQGVAWDPLSKYVASLS-------------------SDRTCRIYANRPTKSKGVEKMNYVCQHVIT 194 (519)
Q Consensus 137 ~~~~~~~h~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 194 (519)
.+..+..... .-..+.|+|+++.+++.. ....|.+||+.+.+......+
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v--------- 246 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL--------- 246 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES---------
T ss_pred EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec---------
Confidence 9988863222 234578899999888885 368999999987532211111
Q ss_pred ccCcccccCCccccceeeecCCCcceeeEEEE--ccCCCeEEEecC-----CcceeeeecccceEEEEeccCCC------
Q 010051 195 KAGQHSTDDSKSAKNHLFHDETLPSFFRRLAW--SPDGSFLLVPAG-----SYKISSMSESINSAYIFSRKDLS------ 261 (519)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--sp~g~~l~~~~~-----~~~~~~~~~~~~~i~i~~~~~~~------ 261 (519)
.........+.| +|+++++++++. .. +.|.+|......
T Consensus 247 --------------------g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls---------s~V~v~~~d~g~~~~~~v 297 (462)
T 2ece_A 247 --------------------GEENRMALELRPLHDPTKLMGFINMVVSLKDLS---------SSIWLWFYEDGKWNAEKV 297 (462)
T ss_dssp --------------------CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC---------EEEEEEEEETTEEEEEEE
T ss_pred --------------------CCCCCccceeEeeECCCCCEEEEEEeeeccCCC---------ceEEEEEecCCceeEEEE
Confidence 001122334545 999999988764 22 344433322100
Q ss_pred -----c-ccccCC-------CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCC---CceEEE
Q 010051 262 -----R-PALQLP-------GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV---PPIAIL 325 (519)
Q Consensus 262 -----~-~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~---~~~~~~ 325 (519)
. ....+. +-......+.+||||++| .++.-..+.|.+||+... +.+..+
T Consensus 298 Idi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfL---------------YVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 298 IEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFL---------------YLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp EEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEE---------------EEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EeCCCccccccccccccccccCCCceeEEEECCCCCEE---------------EEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 0 000010 002346788999998543 233334689999998632 444444
Q ss_pred ecc-------c---c---ccEEEEEEcCCCCEEEEEe
Q 010051 326 AGL-------H---Y---AAITDIAWSNNARYLALSS 349 (519)
Q Consensus 326 ~~~-------~---~---~~i~~~~~s~~g~~l~~~~ 349 (519)
... | . +.-..++++|||++|+++.
T Consensus 363 ~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 363 KLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 431 0 0 1257899999999999987
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.16 E-value=4.1e-09 Score=96.25 Aligned_cols=243 Identities=9% Similarity=-0.008 Sum_probs=139.1
Q ss_pred CCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceEEEe-------cccccCeEEEEEcCCCCeEEEeeC-----CCeE
Q 010051 104 KDVLDLQWSTDGAFLLSGSV--DNSCIIWDVNKGSVLQIL-------DAHFHYVQGVAWDPLSKYVASLSS-----DRTC 169 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~~~~~-----dg~i 169 (519)
..+..++++++|+.+++... ++.++||.+.+++. ..+ ..|-..+.+++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999998888642 34355555545543 222 124467899999999876655433 5789
Q ss_pred EEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeeccc
Q 010051 170 RIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESI 249 (519)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~ 249 (519)
.+||+.+++......+. . ........+..++++|++..++++.... ...
T Consensus 96 ~~~d~~tg~~~~~~~~~----------~---------------~~~~~~~~~~~v~vd~~~g~~yvtd~~~------~~~ 144 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLP----------P---------------PITLSNSFVNDLAVDLIHNFVYISDPAP------DDK 144 (343)
T ss_dssp EEEETTTTEEEEEEECC----------T---------------TTSCTTCCCCEEEEETTTTEEEEEECCS------GGG
T ss_pred EEEECCCCeEEEEEECC----------h---------------hhcccccccceEEEecCCCEEEEEcCcc------CCC
Confidence 99999876521111000 0 0001123456899998765655543210 012
Q ss_pred ceEEEEeccCCCcccccCCCC-----------------------------CCCeEEEEEcCCcccccccCCCCcccccce
Q 010051 250 NSAYIFSRKDLSRPALQLPGA-----------------------------SKPVVAVRFCPLAFNLRESNSAGFFKLPYR 300 (519)
Q Consensus 250 ~~i~i~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~ 300 (519)
+.|.+||..... ....+.+| ...+..++|+|+|+
T Consensus 145 ~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~---------------- 207 (343)
T 2qe8_A 145 AALIRVDLQTGL-AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE---------------- 207 (343)
T ss_dssp CEEEEEETTTCC-EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC----------------
T ss_pred CeEEEEECCCCC-EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCC----------------
Confidence 577777765332 11111111 12356788888774
Q ss_pred EEEEEecC-CeEEEEeCC---CCC-----ceE--EEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceee
Q 010051 301 LIFAIATL-NSLYIYDTE---SVP-----PIA--ILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPIS 369 (519)
Q Consensus 301 ~~~~~~~d-~~i~vwd~~---~~~-----~~~--~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~ 369 (519)
.++.+... +.|+.++.. .+. ... ...+ +......++++++|.++++...++.|.+||..++++.....
T Consensus 208 ~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~ 286 (343)
T 2qe8_A 208 WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT 286 (343)
T ss_dssp EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE
Confidence 34444433 355555532 111 000 1112 33456679999999999998889999999984454322221
Q ss_pred ecCCcccccCCCCcccccCCccEEEeecCCce
Q 010051 370 LSGNKVSKDENKSPLVTKSEDMIIEASTNDKL 401 (519)
Q Consensus 370 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~ 401 (519)
.+ .......++|.+++.++++......
T Consensus 287 ~~-----~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 287 DE-----KLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp CG-----GGSCEEEEEECTTSCEEEEECCGGG
T ss_pred CC-----ceecCCeeEECCCCcEEEEeCcccc
Confidence 11 1235677889888877777665433
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.12 E-value=2.2e-07 Score=84.75 Aligned_cols=239 Identities=13% Similarity=0.086 Sum_probs=138.8
Q ss_pred CCCCEEEEE-eCCCeEEEEEcCCC----ceEEEec-------ccccCeEEEEEcCCCCeEEEeeCC------CeEEEEec
Q 010051 113 TDGAFLLSG-SVDNSCIIWDVNKG----SVLQILD-------AHFHYVQGVAWDPLSKYVASLSSD------RTCRIYAN 174 (519)
Q Consensus 113 ~~~~~l~~~-~~dg~i~vwd~~~~----~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~ 174 (519)
+++++|+.. ..++.|+++|+.+. +....+. .....-..+...|++ .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 778877754 45789999999755 5555552 111234567788999 66666555 78999999
Q ss_pred CCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCC-------ccee--ee
Q 010051 175 RPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGS-------YKIS--SM 245 (519)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~-------~~~~--~~ 245 (519)
.+.+........ ......-+.+.|+|+++.++++.-. +... ..
T Consensus 172 ~T~~v~~~~~~~----------------------------~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~ 223 (462)
T 2ece_A 172 YSFEPLGKWEID----------------------------RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLK 223 (462)
T ss_dssp TTCCEEEECCSB----------------------------CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHH
T ss_pred CCCeEEEEEccC----------------------------CCCccccceEEECCCCCEEEEccCcCccccccccchhhhh
Confidence 887632221110 0011223468889999988886410 0000 00
Q ss_pred ecccceEEEEeccCCCcccccCCC--CCCCeEEEEE--cCCcccccccCCCCcccccceEEEEEe------cCCeEEEEe
Q 010051 246 SESINSAYIFSRKDLSRPALQLPG--ASKPVVAVRF--CPLAFNLRESNSAGFFKLPYRLIFAIA------TLNSLYIYD 315 (519)
Q Consensus 246 ~~~~~~i~i~~~~~~~~~~~~~~~--~~~~v~~~~~--sp~~~~l~~~~~~g~~~~~~~~~~~~~------~d~~i~vwd 315 (519)
......|.+||+... +....+.- .......+.| +|++++ ++.++ .+++|.+|.
T Consensus 224 ~~~~d~V~v~D~~~~-k~~~tI~vg~~g~~P~~i~f~~~Pdg~~----------------aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 224 DRYGNRIHFWDLRKR-KRIHSLTLGEENRMALELRPLHDPTKLM----------------GFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp HHSCCEEEEEETTTT-EEEEEEESCTTEEEEEEEEECSSTTCCE----------------EEEEEEEETTTCCEEEEEEE
T ss_pred hccCCEEEEEECCCC-cEeeEEecCCCCCccceeEeeECCCCCE----------------EEEEEeeeccCCCceEEEEE
Confidence 023479999999763 33333322 1223445555 999854 33333 446777665
Q ss_pred CCCCCc--eEEE--ecc---------c------cccEEEEEEcCCCCEEEEEeC-CCcEEEEEecCC---cccceeeecC
Q 010051 316 TESVPP--IAIL--AGL---------H------YAAITDIAWSNNARYLALSSQ-DGYCTLVEFEND---ELGIPISLSG 372 (519)
Q Consensus 316 ~~~~~~--~~~~--~~~---------~------~~~i~~~~~s~~g~~l~~~~~-dg~i~vwd~~~~---~~~~~~~~~~ 372 (519)
...+.. ...+ ... . ......+.+|+||++|.++.. .+.|.+||+... ++...+...+
T Consensus 287 ~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG 366 (462)
T 2ece_A 287 YEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGG 366 (462)
T ss_dssp EETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBT
T ss_pred ecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCC
Confidence 544321 1111 110 0 234788999999999988775 488999999643 2222222222
Q ss_pred Cc--------ccccCCCCcccccCCccEEEeec
Q 010051 373 NK--------VSKDENKSPLVTKSEDMIIEAST 397 (519)
Q Consensus 373 ~~--------~~~~~~~~~~~~s~~~~~l~~~~ 397 (519)
.. ......-..+.++|||++|+++.
T Consensus 367 ~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 367 IFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 10 00012467899999999988876
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.09 E-value=1.3e-07 Score=87.53 Aligned_cols=281 Identities=6% Similarity=-0.017 Sum_probs=150.3
Q ss_pred CCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcce--------eEEEEccCCCeEEEEEcccCCCccccee
Q 010051 24 ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAI--------NILRFSPCGGELIIWKLHTTETGQAWKV 95 (519)
Q Consensus 24 ~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v--------~~~~~~~~~~~i~vw~~~~~~~~~~~~~ 95 (519)
++..|++++.++.|..+|..+|+.+..................+ ..+.+...++.|..+|..+++ .
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~------~ 125 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGT------V 125 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCC------E
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCC------E
Confidence 35677888888999999999998775543321100000000111 112233346788889988773 2
Q ss_pred eeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCe-----EEEEEcCCCCeEEEeeCCCeEE
Q 010051 96 LKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYV-----QGVAWDPLSKYVASLSSDRTCR 170 (519)
Q Consensus 96 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~~~~~dg~i~ 170 (519)
+................ +..++.++.++.|..+|..+|+.+..+....... ...... +..++.++.++.|.
T Consensus 126 ~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~ 201 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVS 201 (376)
T ss_dssp EEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEE
T ss_pred EEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEE
Confidence 22222111111111222 4578888899999999999999877665432211 112222 45678888899999
Q ss_pred EEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccc
Q 010051 171 IYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESIN 250 (519)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~ 250 (519)
.+|..+++............. ..+...... ...... .+..+++++.+ +
T Consensus 202 ~~d~~tG~~~w~~~~~~~~~~-----------------~~~~~~~~~---~~~p~~--~~~~v~~~~~~----------g 249 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRISQATGS-----------------TEIDRLSDV---DTTPVV--VNGVVFALAYN----------G 249 (376)
T ss_dssp EEETTTCCEEEEEECCC----------------------------CC---CCCCEE--ETTEEEEECTT----------S
T ss_pred EEECCCCcEEEEEecccCCCC-----------------ccccccccc---CCCcEE--ECCEEEEEecC----------c
Confidence 999988764221111000000 000000000 000111 23445555444 4
Q ss_pred eEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEecccc
Q 010051 251 SAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHY 330 (519)
Q Consensus 251 ~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 330 (519)
.++.+|..+.... .... ......+... + ..++.++.++.|..+|..+++.+........
T Consensus 250 ~l~~~d~~tG~~~-w~~~--~~~~~~~~~~--~----------------~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~ 308 (376)
T 3q7m_A 250 NLTALDLRSGQIM-WKRE--LGSVNDFIVD--G----------------NRIYLVDQNDRVMALTIDGGVTLWTQSDLLH 308 (376)
T ss_dssp CEEEEETTTCCEE-EEEC--CCCEEEEEEE--T----------------TEEEEEETTCCEEEEETTTCCEEEEECTTTT
T ss_pred EEEEEECCCCcEE-eecc--CCCCCCceEE--C----------------CEEEEEcCCCeEEEEECCCCcEEEeecccCC
Confidence 5666666543221 1111 1112222222 1 4577788889999999999998776652122
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceee
Q 010051 331 AAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPIS 369 (519)
Q Consensus 331 ~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~ 369 (519)
..+..... .+..|++++.+|.|.++|..+++......
T Consensus 309 ~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 309 RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp SCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 22333333 24678888999999999999887554443
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=1.6e-08 Score=100.72 Aligned_cols=303 Identities=10% Similarity=0.047 Sum_probs=160.1
Q ss_pred CCCEEEEEcCCCcEEEEEecCCccccccccc-ccc--cccc----ccCcceeEEEEcc------CCCeEEEEEcccCCCc
Q 010051 24 ISGLLATGGADYDIKIWLINSGEKQKKIPTA-SYQ--NSLS----YHGSAINILRFSP------CGGELIIWKLHTTETG 90 (519)
Q Consensus 24 ~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~-~~~--~~~~----~~~~~v~~~~~~~------~~~~i~vw~~~~~~~~ 90 (519)
++..|++++.|+.|..+|..+|+.+..+... ... .... ...+. +.+.. .++.|+.+|..+++..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~---v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGK---VIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTE---EEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCE---EEEEecccccCCCCEEEEEECCCCcEE
Confidence 3667888888999999999999987765433 100 0000 01111 22222 1578999998877322
Q ss_pred ccceeeecc--------------------------ccCCCCeEEEEEcCCCCEEEEEeCCC-------------------
Q 010051 91 QAWKVLKNL--------------------------SFHRKDVLDLQWSTDGAFLLSGSVDN------------------- 125 (519)
Q Consensus 91 ~~~~~~~~~--------------------------~~~~~~v~~~~~s~~~~~l~~~~~dg------------------- 125 (519)
-.+...... .+.......+++++++..|+.++.++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 111110000 01111223578889999998887664
Q ss_pred eEEEEEcCCCceEEEecc--cc-------cCeEEEEEcCCC---CeEEEeeCCCeEEEEecCCCCcccccccccee-eEE
Q 010051 126 SCIIWDVNKGSVLQILDA--HF-------HYVQGVAWDPLS---KYVASLSSDRTCRIYANRPTKSKGVEKMNYVC-QHV 192 (519)
Q Consensus 126 ~i~vwd~~~~~~~~~~~~--h~-------~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~ 192 (519)
.|..+|..+|+.+..++. |. .....+....+| ..++.++.+|.|.++|..+++........... ...
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 599999999998877653 21 112223333466 67899999999999999998754322221100 000
Q ss_pred EeccCcccccCCc--cccc-eeeecCCCcceeeEEEEccCCCeEEEecCCcceeee------------------------
Q 010051 193 ITKAGQHSTDDSK--SAKN-HLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSM------------------------ 245 (519)
Q Consensus 193 ~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~------------------------ 245 (519)
+...+........ .... .+.........-..++++|++..+++...+......
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 0000000000000 0000 000000000112368899998888876432100000
Q ss_pred ---------ecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeC
Q 010051 246 ---------SESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDT 316 (519)
Q Consensus 246 ---------~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~ 316 (519)
....+.+..||..+... +-... +..++....+...+ ..++.++.++.+++||+
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~-~W~~~-~~~~~~~g~~~~~g----------------~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKA-AWSVE-HVSPWNGGTLTTAG----------------NVVFQGTADGRLVAYHA 505 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEE-EEEEE-ESSSCCCCEEEETT----------------TEEEEECTTSEEEEEET
T ss_pred cccccccCCCCCccEEEEEeCCCCcE-EeecC-CCCCCcCcceEeCC----------------CEEEEECCCCcEEEEEC
Confidence 00125667777654321 11111 11111112222222 56788889999999999
Q ss_pred CCCCceEEEeccccccEEEEEEcCCCCEEEE
Q 010051 317 ESVPPIAILAGLHYAAITDIAWSNNARYLAL 347 (519)
Q Consensus 317 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~ 347 (519)
.+++.+..+...+.....-+.|..+|+.+++
T Consensus 506 ~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 506 ATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 9999999987634333345667788865443
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.06 E-value=6.2e-09 Score=94.52 Aligned_cols=266 Identities=9% Similarity=-0.065 Sum_probs=149.8
Q ss_pred EEEEecCCCEEEEEc----------CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccC
Q 010051 18 TLDFHPISGLLATGG----------ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTT 87 (519)
Q Consensus 18 ~~~~sp~~~~la~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~ 87 (519)
.++|+||+++|+++. .++.|.+||..+++...+++.......+ .......++++|+++.+++-+....
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~--~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS--VGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC--BSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc--cCCCcceEEEcCCCCEEEEEccCCC
Confidence 799999999888775 3688999999999988876532100000 0123557889999888888765321
Q ss_pred CCcccceeeec--cccCCCCeEEE------EEcCCCC-EEEEEeCCCeEEEEEcCC-----CceEE----EecccccCeE
Q 010051 88 ETGQAWKVLKN--LSFHRKDVLDL------QWSTDGA-FLLSGSVDNSCIIWDVNK-----GSVLQ----ILDAHFHYVQ 149 (519)
Q Consensus 88 ~~~~~~~~~~~--~~~~~~~v~~~------~~s~~~~-~l~~~~~dg~i~vwd~~~-----~~~~~----~~~~h~~~v~ 149 (519)
. .+.. +.... +..+ .+.|+++ .+++.+.||.+.+.|+.+ ++... .+.....+.
T Consensus 147 ~------~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~- 217 (368)
T 1mda_H 147 A------AAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA- 217 (368)
T ss_dssp C------EEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-
T ss_pred C------eEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-
Confidence 1 1111 11111 2222 1234443 345566788888888876 43321 111112333
Q ss_pred EEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 150 GVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 150 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
. .+++..++..+. +.+.+.|+............... .........+.....++++|+
T Consensus 218 --~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~-------------------~~~~~~~~~p~g~~~v~~s~d 274 (368)
T 1mda_H 218 --Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNE-------------------SGRKADNFRSAGFQMVAKLKN 274 (368)
T ss_dssp --E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSC-------------------THHHHTTEEECSSSCEEEETT
T ss_pred --c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecc-------------------ccccccccccCcceeeEEcCC
Confidence 3 566666666666 89999998653211100000000 000000000111223789999
Q ss_pred CCeEEEecC-C-c-ceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe
Q 010051 230 GSFLLVPAG-S-Y-KISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA 306 (519)
Q Consensus 230 g~~l~~~~~-~-~-~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~ 306 (519)
+++++++.. . + .+. . .+.+.++|..+.. .+..+... .....++|+|||+. .+++..
T Consensus 275 g~~lyV~~~~~~~~~~~---~-~~~~~ViD~~t~~-vv~~i~vg-~~p~gi~~s~Dg~~---------------l~va~~ 333 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLA---A-AENTSSVTASVGQ-TSGPISNG-HDSDAIIAAQDGAS---------------DNYANS 333 (368)
T ss_dssp TTEEEEEEEECSSCTTS---C-EEEEEEEESSSCC-EEECCEEE-EEECEEEECCSSSC---------------EEEEEE
T ss_pred CCEEEEEeccccCcccc---c-CCCEEEEECCCCe-EEEEEECC-CCcceEEECCCCCE---------------EEEEcc
Confidence 999887532 1 0 000 0 1245599987653 33333322 25788999999854 355555
Q ss_pred -cCCeEEEEeCCCCCceEEEeccccccEEEEEEcC
Q 010051 307 -TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSN 340 (519)
Q Consensus 307 -~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~ 340 (519)
.++.|.++|+.+++.+..+.. . .....+++.+
T Consensus 334 ~~~~~VsVID~~t~kvv~~I~v-g-~~P~~i~~~~ 366 (368)
T 1mda_H 334 AGTEVLDIYDAASDQDQSSVEL-D-KGPESLSVQN 366 (368)
T ss_dssp TTTTEEEEEESSSCEEEEECCC-C-SCCCEEECCC
T ss_pred CCCCeEEEEECCCCcEEEEEEC-C-CCCCEEEeec
Confidence 589999999999999988875 2 3344555543
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.05 E-value=3.8e-08 Score=84.26 Aligned_cols=213 Identities=10% Similarity=0.099 Sum_probs=131.8
Q ss_pred ecCCCCC--EEEEEEecCCCEEEEEcC--CCcEEEEEecCCccccccccccc--cccccccCcceeEEEEccCCCeEEEE
Q 010051 9 NWHDTKP--VLTLDFHPISGLLATGGA--DYDIKIWLINSGEKQKKIPTASY--QNSLSYHGSAINILRFSPCGGELIIW 82 (519)
Q Consensus 9 ~~~h~~~--V~~~~~sp~~~~la~~~~--dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~i~vw 82 (519)
.+.|... ...++|+||+.++++.+. ++.|+++|..+++.+..++.... ...+..+...++.+.| .++.+.++
T Consensus 14 ~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~--~~~~v~vi 91 (266)
T 2iwa_A 14 EFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW--LKNIGFIY 91 (266)
T ss_dssp EEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET--TCSEEEEE
T ss_pred EEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe--cCCEEEEE
Confidence 3456543 689999998755555443 57899999999998887653221 1112222333433333 57889999
Q ss_pred EcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccc-----cCeEEEEEcCCC
Q 010051 83 KLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF-----HYVQGVAWDPLS 157 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~ 157 (519)
|..+. +.+..+...... ...+++||+.|+.+..++.|.++|..+.+.+..+.-.. ..+..+.|. ++
T Consensus 92 D~~t~------~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 92 DRRTL------SNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp ETTTT------EEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred ECCCC------cEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC
Confidence 98876 555555322111 23355688888877778999999999988877765321 236788888 66
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
..++....++.|.+.|..+++......+..... .. .............++|+|+++.+++++
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~--------~~----------~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRK--------KL----------IDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHH--------HH----------HHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCccc--------cc----------ccccccccCceEEEEEcCCCCEEEEEC
Confidence 555555567899999999887432222110000 00 000000113457899999998888876
Q ss_pred CCcceeeeecccceEEEEeccC
Q 010051 238 GSYKISSMSESINSAYIFSRKD 259 (519)
Q Consensus 238 ~~~~~~~~~~~~~~i~i~~~~~ 259 (519)
... +.++..++..
T Consensus 225 k~~---------~~v~~i~l~~ 237 (266)
T 2iwa_A 225 KLW---------PKLFEIKLHL 237 (266)
T ss_dssp TTC---------SEEEEEEEEE
T ss_pred CCC---------CeEEEEEEec
Confidence 543 5777777653
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.05 E-value=2.6e-08 Score=90.53 Aligned_cols=287 Identities=10% Similarity=-0.044 Sum_probs=158.4
Q ss_pred EEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------CCeEEEEEcccCCCcc
Q 010051 19 LDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------GGELIIWKLHTTETGQ 91 (519)
Q Consensus 19 ~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~i~vw~~~~~~~~~ 91 (519)
+.+..++ .|..++.++.|..|| .+++....... ....+.++...++ .+ |..+|. ++
T Consensus 25 ~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~---------~~~~~~~~~~~~~g~l~v~t~~-l~~~d~-~g---- 87 (330)
T 3hxj_A 25 PILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKS---------GEIIECRPSIGKDGTIYFGSDK-VYAINP-DG---- 87 (330)
T ss_dssp CEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCG---------GGEEEECCEETTTTEECCSSCE-EEEECC-CG----
T ss_pred ceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEec---------CCCcccceEEecCCcEEEecCc-EEEECC-CC----
Confidence 3444455 455666788899999 88876544321 1122233333322 23 666664 32
Q ss_pred cceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEE
Q 010051 92 AWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRI 171 (519)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~i 171 (519)
+.+..+...........+. +..|+.++.++.|..+|.. ++....+..+...+.++...+++. |+.++.++.|..
T Consensus 88 --~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~ 161 (330)
T 3hxj_A 88 --TEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYA 161 (330)
T ss_dssp --GGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEE
T ss_pred --cEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEE
Confidence 1122222122222223333 5568888889999999988 777666665555566677776666 666777899999
Q ss_pred EecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccce
Q 010051 172 YANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINS 251 (519)
Q Consensus 172 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~ 251 (519)
||.. ++...... .....+.++...++|..++.+ . .
T Consensus 162 ~d~~-g~~~~~~~-------------------------------~~~~~~~~~~~d~~g~l~v~t---~----------~ 196 (330)
T 3hxj_A 162 INPD-GTEKWRFK-------------------------------TNDAITSAASIGKDGTIYFGS---D----------K 196 (330)
T ss_dssp ECTT-SCEEEEEE-------------------------------CSSCCCSCCEECTTCCEEEES---S----------S
T ss_pred ECCC-CCEeEEEe-------------------------------cCCCceeeeEEcCCCEEEEEe---C----------E
Confidence 9987 43211000 011234456666777755543 2 4
Q ss_pred EEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccc
Q 010051 252 AYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYA 331 (519)
Q Consensus 252 i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 331 (519)
++.+| .+. ............+.++...++| .++.++.++.|..+|. ++..+..+.. ...
T Consensus 197 l~~~d-~~g-~~~~~~~~~~~~~~~~~~~~~g-----------------~l~v~t~~~gl~~~~~-~g~~~~~~~~-~~~ 255 (330)
T 3hxj_A 197 VYAIN-PDG-TEKWNFYAGYWTVTRPAISEDG-----------------TIYVTSLDGHLYAINP-DGTEKWRFKT-GKR 255 (330)
T ss_dssp EEEEC-TTS-CEEEEECCSSCCCSCCEECTTS-----------------CEEEEETTTEEEEECT-TSCEEEEEEC-SSC
T ss_pred EEEEC-CCC-cEEEEEccCCcceeceEECCCC-----------------eEEEEcCCCeEEEECC-CCCEeEEeeC-CCC
Confidence 55565 222 1122222222345556666554 3566666778888874 5666555554 333
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCceee
Q 010051 332 AITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVT 403 (519)
Q Consensus 332 ~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 403 (519)
.+..+.+.+++ .|..++.+|.|..+|. +++......+ ....+.++...++|.+.+ ++.++.+.
T Consensus 256 ~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~------~~~~~~~~~~d~~g~l~~-gt~~G~~~ 318 (330)
T 3hxj_A 256 IESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFET------GSWIIATPVIDENGTIYF-GTRNGKFY 318 (330)
T ss_dssp CCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEEC------SSCCCSCCEECTTCCEEE-ECTTSCEE
T ss_pred ccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEc------CCccccceEEcCCCEEEE-EcCCCeEE
Confidence 44556666666 4666778888999985 4433222222 124556667767776555 55555553
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.04 E-value=3.8e-08 Score=98.20 Aligned_cols=305 Identities=9% Similarity=0.072 Sum_probs=159.7
Q ss_pred CCCEEEEEcCCCcEEEEEecCCccccccccc-ccc--ccccc----cCcceeEEEEcc------CCCeEEEEEcccCCCc
Q 010051 24 ISGLLATGGADYDIKIWLINSGEKQKKIPTA-SYQ--NSLSY----HGSAINILRFSP------CGGELIIWKLHTTETG 90 (519)
Q Consensus 24 ~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~-~~~--~~~~~----~~~~v~~~~~~~------~~~~i~vw~~~~~~~~ 90 (519)
++..|++++.|+.|+.+|..+|+.+...... ... ..... ..+. +.+.. .++.|..||..+++..
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~---v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK---VVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE---EEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE---EEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 3567888889999999999999987665432 100 00000 1111 22221 2578888888877422
Q ss_pred ccceeee-c---------c---------------ccCCCCeEEEEEcCCCCEEEEEeCCCe-------------------
Q 010051 91 QAWKVLK-N---------L---------------SFHRKDVLDLQWSTDGAFLLSGSVDNS------------------- 126 (519)
Q Consensus 91 ~~~~~~~-~---------~---------------~~~~~~v~~~~~s~~~~~l~~~~~dg~------------------- 126 (519)
-.+.... . + .++......++++|++.+|+.++.++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 1111000 0 0 011111235788898889998887764
Q ss_pred EEEEEcCCCceEEEecc--cc-------cCeEEEEEcCCCC---eEEEeeCCCeEEEEecCCCCcccccccccee-eEEE
Q 010051 127 CIIWDVNKGSVLQILDA--HF-------HYVQGVAWDPLSK---YVASLSSDRTCRIYANRPTKSKGVEKMNYVC-QHVI 193 (519)
Q Consensus 127 i~vwd~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~ 193 (519)
|..||..+|+.+..+.. |. ..+.......+|+ .++.++.+|.+.++|..+++......+.... ...+
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 99999999998877654 21 1222222223454 7889999999999999998754222111100 0000
Q ss_pred e-ccCcccccC-----CccccceeeecCC-CcceeeEEEEccCCCeEEEecCCcceeeeec-------------------
Q 010051 194 T-KAGQHSTDD-----SKSAKNHLFHDET-LPSFFRRLAWSPDGSFLLVPAGSYKISSMSE------------------- 247 (519)
Q Consensus 194 ~-~~~~~~~~~-----~~~~~~~~~~~~~-~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~------------------- 247 (519)
. ..+...... .......+..... .......++|+|+...+++...+........
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 0 000000000 0000000000000 0111235899999888887644311100000
Q ss_pred ----------------ccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeE
Q 010051 248 ----------------SINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSL 311 (519)
Q Consensus 248 ----------------~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i 311 (519)
..+.++.||+.+... +-.+..+ .+...-.+... ..+++.++.|+.|
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~-~W~~~~~-~~~~~g~~~ta----------------gglvf~gt~dg~l 498 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA-AWEVPYV-TIFNGGTLSTA----------------GNLVFEGSADGRV 498 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEE-EEEEEES-SSCCCCEEEET----------------TTEEEEECTTSEE
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCe-EeEccCC-CCccCccceEC----------------CCEEEEECCCCcE
Confidence 025677777754321 1111111 11111111111 1578889999999
Q ss_pred EEEeCCCCCceEEEeccccccEEEEEEcCCCCE-EEEEe
Q 010051 312 YIYDTESVPPIAILAGLHYAAITDIAWSNNARY-LALSS 349 (519)
Q Consensus 312 ~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~-l~~~~ 349 (519)
+.||.++|+.+..+...+.....-+.|..+|+. +++.+
T Consensus 499 ~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 499 IAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp EEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence 999999999998887623333345677788864 44443
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.99 E-value=4.9e-07 Score=83.71 Aligned_cols=258 Identities=9% Similarity=-0.003 Sum_probs=143.3
Q ss_pred CCCEEEEEcCCCcEEEEEecCCcccccccccccccc-ccccCcceeEEEEccCCCeEEEEEcccCCCcccceeeeccccC
Q 010051 24 ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNS-LSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFH 102 (519)
Q Consensus 24 ~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~ 102 (519)
++..|++++.++.|..+|..+|+.+........... .....+ .+.+...++.|..+|..++. .+......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~---~v~v~~~~g~l~~~d~~tG~------~~W~~~~~ 172 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG---LVLIHTSNGQLQALNEADGA------VKWTVNLD 172 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETT---EEEEECTTSEEEEEETTTCC------EEEEEECC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECC---EEEEEcCCCeEEEEECCCCc------EEEEEeCC
Confidence 456777788899999999999987755443221110 111111 23444567889999987773 22222211
Q ss_pred CCC-----eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccC----eEE---EEEcC--CCCeEEEeeCCCe
Q 010051 103 RKD-----VLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHY----VQG---VAWDP--LSKYVASLSSDRT 168 (519)
Q Consensus 103 ~~~-----v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~----v~~---~~~~~--~~~~l~~~~~dg~ 168 (519)
... ....... +..++.++.++.|..+|..+|+.+......... +.. +...| .+..++.++.++.
T Consensus 173 ~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~ 250 (376)
T 3q7m_A 173 MPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN 250 (376)
T ss_dssp C-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC
T ss_pred CCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE
Confidence 110 0111222 456888888999999999999887665432110 000 00111 2467777888999
Q ss_pred EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecc
Q 010051 169 CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSES 248 (519)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~ 248 (519)
+..+|..+++....... .....+.. ++..+++++.+
T Consensus 251 l~~~d~~tG~~~w~~~~---------------------------------~~~~~~~~--~~~~l~~~~~~--------- 286 (376)
T 3q7m_A 251 LTALDLRSGQIMWKREL---------------------------------GSVNDFIV--DGNRIYLVDQN--------- 286 (376)
T ss_dssp EEEEETTTCCEEEEECC---------------------------------CCEEEEEE--ETTEEEEEETT---------
T ss_pred EEEEECCCCcEEeeccC---------------------------------CCCCCceE--ECCEEEEEcCC---------
Confidence 99999988753211100 01112222 34555555544
Q ss_pred cceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEecc
Q 010051 249 INSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGL 328 (519)
Q Consensus 249 ~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~ 328 (519)
+.++.+|..+..............+...... ...++.++.+|.|+++|..+++.+..+..
T Consensus 287 -g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~------------------~~~l~v~~~~g~l~~~d~~tG~~~~~~~~- 346 (376)
T 3q7m_A 287 -DRVMALTIDGGVTLWTQSDLLHRLLTSPVLY------------------NGNLVVGDSEGYLHWINVEDGRFVAQQKV- 346 (376)
T ss_dssp -CCEEEEETTTCCEEEEECTTTTSCCCCCEEE------------------TTEEEEECTTSEEEEEETTTCCEEEEEEC-
T ss_pred -CeEEEEECCCCcEEEeecccCCCcccCCEEE------------------CCEEEEEeCCCeEEEEECCCCcEEEEEec-
Confidence 4666666654322111100001111111111 14678888899999999999998877664
Q ss_pred ccccEEE-EEEcCCCCEEEEEeCCCcEEEEE
Q 010051 329 HYAAITD-IAWSNNARYLALSSQDGYCTLVE 358 (519)
Q Consensus 329 ~~~~i~~-~~~s~~g~~l~~~~~dg~i~vwd 358 (519)
....+.. ... .+..|+.++.+|.|+.|+
T Consensus 347 ~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 347 DSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 2333322 222 245778888999999886
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.97 E-value=3.1e-08 Score=90.01 Aligned_cols=264 Identities=11% Similarity=0.015 Sum_probs=146.7
Q ss_pred CEEEEEEecCCCEEEEEcCCCcEEEEEecCCcccccccccccc-ccccccCcceeEEEEccCCCeEEEEEcccCCCcccc
Q 010051 15 PVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQ-NSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAW 93 (519)
Q Consensus 15 ~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~ 93 (519)
.+.++...+++. |..++.+ |..+|. +++....+...... ....... ..+-+...++.|..+|.. +
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~---~~l~v~t~~~~l~~~d~~-g------ 126 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFE---DILYVTSMDGHLYAINTD-G------ 126 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEET---TEEEEECTTSEEEEECTT-S------
T ss_pred cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEEC---CEEEEEecCCEEEEEcCC-C------
Confidence 346666666665 4444444 888885 56554443221110 0000011 112333346778888876 4
Q ss_pred eeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEe
Q 010051 94 KVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYA 173 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 173 (519)
+.......+...+.++...+++. |+.++.++.|..+|.. ++.+..+......+.++...+++..++. + +.|..+|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d 201 (330)
T 3hxj_A 127 TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN 201 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC
T ss_pred CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC
Confidence 22222222344456667777776 6667788999999998 8777666655566777778777775544 4 7788888
Q ss_pred cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEE
Q 010051 174 NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAY 253 (519)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~ 253 (519)
.+++.. +........+.++...++|...+.+ .+ +.++
T Consensus 202 -~~g~~~-------------------------------~~~~~~~~~~~~~~~~~~g~l~v~t-~~----------~gl~ 238 (330)
T 3hxj_A 202 -PDGTEK-------------------------------WNFYAGYWTVTRPAISEDGTIYVTS-LD----------GHLY 238 (330)
T ss_dssp -TTSCEE-------------------------------EEECCSSCCCSCCEECTTSCEEEEE-TT----------TEEE
T ss_pred -CCCcEE-------------------------------EEEccCCcceeceEECCCCeEEEEc-CC----------CeEE
Confidence 443311 1111112345677888887655543 33 2444
Q ss_pred EEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccE
Q 010051 254 IFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAI 333 (519)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i 333 (519)
.++.. ......+......+..+.+.++ ..++.++.++.|..+|. +++.+..+.. ....+
T Consensus 239 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~-----------------g~l~v~t~~ggl~~~d~-~g~~~~~~~~-~~~~~ 297 (330)
T 3hxj_A 239 AINPD--GTEKWRFKTGKRIESSPVIGNT-----------------DTIYFGSYDGHLYAINP-DGTEKWNFET-GSWII 297 (330)
T ss_dssp EECTT--SCEEEEEECSSCCCSCCEECTT-----------------SCEEEECTTCEEEEECT-TSCEEEEEEC-SSCCC
T ss_pred EECCC--CCEeEEeeCCCCccccceEcCC-----------------CeEEEecCCCCEEEECC-CCcEEEEEEc-CCccc
Confidence 45421 1111111111111112223322 34677778888999996 6776666654 45567
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 334 TDIAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 334 ~~~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
.++...++|+ |..++.+|.+++......
T Consensus 298 ~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 298 ATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp SCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred cceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 7788878886 455788999999876543
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.96 E-value=3.8e-10 Score=103.93 Aligned_cols=187 Identities=14% Similarity=0.087 Sum_probs=102.5
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEE
Q 010051 114 DGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVI 193 (519)
Q Consensus 114 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 193 (519)
++..|++++.||.|+.||..+|+.+..+.. ..+.+..+..++..+++++.||.|..||..+++.........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~------ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI------ 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC------
Confidence 577899999999999999999999887765 455555556677788888899999999998775421111100
Q ss_pred eccCcccccCCccccceeeecCCCcceee-EEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCC
Q 010051 194 TKAGQHSTDDSKSAKNHLFHDETLPSFFR-RLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASK 272 (519)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 272 (519)
...+. +..+. ++..+++++.+ +.++.||..+... ...+..+.
T Consensus 80 ------------------------~~~~~~sp~~~-~~~~v~~g~~d----------g~v~a~D~~tG~~-~w~~~~~~- 122 (369)
T 2hz6_A 80 ------------------------PELVQASPCRS-SDGILYMGKKQ----------DIWYVIDLLTGEK-QQTLSSAF- 122 (369)
T ss_dssp ------------------------HHHHTTCSCC------CCCCEEE----------EEEEEECCC--------------
T ss_pred ------------------------ccccccCceEe-cCCEEEEEeCC----------CEEEEEECCCCcE-EEEecCCC-
Confidence 00000 00111 22334443333 5788888765432 22222221
Q ss_pred CeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCC---CEEEEEe
Q 010051 273 PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNA---RYLALSS 349 (519)
Q Consensus 273 ~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g---~~l~~~~ 349 (519)
...++|++ ..+++++.++.|+.||..+++.+..+.. +. ....+++.+. ..+++++
T Consensus 123 ---~~~~~p~~----------------~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~--~~~~~~~~~~~~~~~v~~~~ 180 (369)
T 2hz6_A 123 ---ADSLSPST----------------SLLYLGRTEYTITMYDTKTRELRWNATY-FD--YAASLPEDDVDYKMSHFVSN 180 (369)
T ss_dssp -----------------------------EEEEEEEEEEECCCSSSSSCCCEEEE-EE--ECCBCCCCCTTCCCCEEEEE
T ss_pred ---cccccccC----------------CEEEEEecCCEEEEEECCCCCEEEeEec-cc--ccCccccCCccccceEEEEC
Confidence 13345533 5688888899999999999988766653 21 2333444432 4677788
Q ss_pred CCCcEEEEEecCCcccce
Q 010051 350 QDGYCTLVEFENDELGIP 367 (519)
Q Consensus 350 ~dg~i~vwd~~~~~~~~~ 367 (519)
.||.|+.||..+++....
T Consensus 181 ~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 181 GDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp TSCEEEEECTTTCCEEEE
T ss_pred CCCEEEEEECCCCcEEEE
Confidence 999999999998865433
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=7.5e-07 Score=76.26 Aligned_cols=206 Identities=11% Similarity=0.077 Sum_probs=129.9
Q ss_pred eeeeccccCCC--CeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceEEEecccc-cCeEEEEEcCCCCeEEE-eeCCC
Q 010051 94 KVLKNLSFHRK--DVLDLQWSTDGAFLLSGSV--DNSCIIWDVNKGSVLQILDAHF-HYVQGVAWDPLSKYVAS-LSSDR 167 (519)
Q Consensus 94 ~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~-~~~dg 167 (519)
+.+..+. |.. ....++|++++..+++.+. ++.|.++|+.+++.+..+.... .....+++. ++.|+. .-.++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4445553 443 3689999998644444333 5799999999999888765322 233456665 445544 44578
Q ss_pred eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeec
Q 010051 168 TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSE 247 (519)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~ 247 (519)
.+.++|..+.+....... . .-....+++||+.++++.++
T Consensus 87 ~v~viD~~t~~v~~~i~~-----------------------------g----~~~g~glt~Dg~~l~vs~gs-------- 125 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTH-----------------------------Q----MKDGWGLATDGKILYGSDGT-------- 125 (266)
T ss_dssp EEEEEETTTTEEEEEEEC-----------------------------C----SSSCCEEEECSSSEEEECSS--------
T ss_pred EEEEEECCCCcEEEEEEC-----------------------------C----CCCeEEEEECCCEEEEECCC--------
Confidence 999999987653211100 0 00124466788888877654
Q ss_pred ccceEEEEeccCCCcccccCCC-C---CCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceE
Q 010051 248 SINSAYIFSRKDLSRPALQLPG-A---SKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIA 323 (519)
Q Consensus 248 ~~~~i~i~~~~~~~~~~~~~~~-~---~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 323 (519)
+.++++|..+.........+ . -..++.+.|. +| ...+....++.|.+.|..+++.+.
T Consensus 126 --~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg----------------~lyvn~~~~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 126 --SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG----------------EVWANIWQTDCIARISAKDGTLLG 186 (266)
T ss_dssp --SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT----------------EEEEEETTSSEEEEEETTTCCEEE
T ss_pred --CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC----------------EEEEecCCCCeEEEEECCCCcEEE
Confidence 68889998654322211111 1 1235566766 44 334444457899999999999998
Q ss_pred EEecc-c-----------cccEEEEEEcCCCCE-EEEEeCCCcEEEEEecCC
Q 010051 324 ILAGL-H-----------YAAITDIAWSNNARY-LALSSQDGYCTLVEFEND 362 (519)
Q Consensus 324 ~~~~~-~-----------~~~i~~~~~s~~g~~-l~~~~~dg~i~vwd~~~~ 362 (519)
.+... . ....+.++|+|+++. ++++...+.|.+.++...
T Consensus 187 ~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 187 WILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 88641 1 024589999999865 555557788999988764
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.92 E-value=1.9e-06 Score=75.39 Aligned_cols=223 Identities=9% Similarity=-0.000 Sum_probs=129.7
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEe-eCCCeEEEEecCCCCcccc
Q 010051 105 DVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASL-SSDRTCRIYANRPTKSKGV 182 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~ 182 (519)
.+..++|++++..|+.+. ..+.|.++++..+.....+.........+++++++..|+.+ ...+.|.++++.......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~- 115 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV- 115 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE-
Confidence 467899998766666554 46799999987665433333333467899999976655544 456789999886432100
Q ss_pred ccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc
Q 010051 183 EKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR 262 (519)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~ 262 (519)
+ .. .. ......++++|++..|+++.... ..+.|+.++......
T Consensus 116 ----------~------------------~~-~~-~~~P~~i~vd~~~g~lyv~~~~~-------~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 116 ----------L------------------FD-TG-LVNPRGIVTDPVRGNLYWTDWNR-------DNPKIETSHMDGTNR 158 (267)
T ss_dssp ----------E------------------EC-SS-CSSEEEEEEETTTTEEEEEECCS-------SSCEEEEEETTSCCC
T ss_pred ----------E------------------EE-CC-CCCccEEEEeeCCCEEEEEECCC-------CCcEEEEEecCCCCc
Confidence 0 00 00 12356899999776666544220 124677777643221
Q ss_pred ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCC
Q 010051 263 PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNA 342 (519)
Q Consensus 263 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g 342 (519)
.. ...........++++|++.. ++++-...+.|.++++........+.. ......++.. +
T Consensus 159 ~~-~~~~~~~~P~gia~d~~~~~---------------lyv~d~~~~~I~~~~~~g~~~~~~~~~--~~~P~gi~~d--~ 218 (267)
T 1npe_A 159 RI-LAQDNLGLPNGLTFDAFSSQ---------------LCWVDAGTHRAECLNPAQPGRRKVLEG--LQYPFAVTSY--G 218 (267)
T ss_dssp EE-EECTTCSCEEEEEEETTTTE---------------EEEEETTTTEEEEEETTEEEEEEEEEC--CCSEEEEEEE--T
T ss_pred EE-EEECCCCCCcEEEEcCCCCE---------------EEEEECCCCEEEEEecCCCceEEEecC--CCCceEEEEe--C
Confidence 11 11122345788999997633 244445567899999875543333332 2334566654 4
Q ss_pred CEEEEEe-CCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCc
Q 010051 343 RYLALSS-QDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSED 390 (519)
Q Consensus 343 ~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 390 (519)
..|+.+. ..+.|.++|..+++....+.... ......+++.|++
T Consensus 219 ~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~-----~~~p~gi~~~~~~ 262 (267)
T 1npe_A 219 KNLYYTDWKTNSVIAMDLAISKEMDTFHPHK-----QTRLYGITIALSQ 262 (267)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEECCSS-----CCCCCCEEEECSC
T ss_pred CEEEEEECCCCeEEEEeCCCCCceEEEcccc-----ccccceeeecCcc
Confidence 4555444 55889999988776544443211 1134556666655
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.91 E-value=3.2e-08 Score=93.63 Aligned_cols=265 Identities=11% Similarity=0.083 Sum_probs=153.7
Q ss_pred ecCCCEEEEEcC-CCcEEEEEecCCcccc--cccccccccccc----ccCcceeEEE-----EccC----------CCeE
Q 010051 22 HPISGLLATGGA-DYDIKIWLINSGEKQK--KIPTASYQNSLS----YHGSAINILR-----FSPC----------GGEL 79 (519)
Q Consensus 22 sp~~~~la~~~~-dg~i~iwd~~~~~~~~--~~~~~~~~~~~~----~~~~~v~~~~-----~~~~----------~~~i 79 (519)
.+||++|..... ++.|.+.|+.+.++.. .++...-...+. .....+.+-. +.++ ++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 348888776654 5679999999998777 333222122211 1112221111 1112 2567
Q ss_pred EEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCC---------------eEEEEEcCCCceEEEeccc
Q 010051 80 IIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDN---------------SCIIWDVNKGSVLQILDAH 144 (519)
Q Consensus 80 ~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---------------~i~vwd~~~~~~~~~~~~h 144 (519)
.++|..+. +...++.-.. ....++++|+|+++++.+.+. .|.+.|.....
T Consensus 178 tvID~~t~------~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~-------- 242 (595)
T 1fwx_A 178 TAVDADKW------EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE-------- 242 (595)
T ss_dssp EEEETTTT------EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH--------
T ss_pred EEEECCCC------eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee--------
Confidence 77777765 4444443212 346678999999999888653 23333321111
Q ss_pred ccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEE
Q 010051 145 FHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRL 224 (519)
Q Consensus 145 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (519)
.+.++|++... +.|.+.|.++.+... ....+ .......++
T Consensus 243 -------~~v~~Gk~~~i----~~V~VID~~~~~~~~-------~~~~I----------------------pvg~~PhGv 282 (595)
T 1fwx_A 243 -------KAIAAGDYQEL----NGVKVVDGRKEASSL-------FTRYI----------------------PIANNPHGC 282 (595)
T ss_dssp -------HHHHHTCSEEE----TTEEEEECSGGGCCS-------SEEEE----------------------EEESSCCCE
T ss_pred -------EeccCCCeeEE----CcEEEEeCcccCCce-------eEEEE----------------------ecCCCceEE
Confidence 12234554433 459999988721000 00000 011234479
Q ss_pred EEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc----------ccccCCCCCCCeEEEEEcCCcccccccCCCCc
Q 010051 225 AWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR----------PALQLPGASKPVVAVRFCPLAFNLRESNSAGF 294 (519)
Q Consensus 225 ~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~----------~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~ 294 (519)
.++|||++++++.... +.+.++|+..... .+.....-......++|+|+| .
T Consensus 283 ~~sPDGk~v~V~~~~s---------~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~--------- 343 (595)
T 1fwx_A 283 NMAPDKKHLCVAGKLS---------PTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-N--------- 343 (595)
T ss_dssp EECTTSSEEEEECTTS---------SBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-E---------
T ss_pred EEcCCCCEEEEeCCCC---------CeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-e---------
Confidence 9999999999876543 6899999874311 111112233567889999998 3
Q ss_pred ccccceEEEEEecCCeEEEEeCCC----------CCceEEEeccccccE-----EEEEEcCCCCEEEEEeC---CCc---
Q 010051 295 FKLPYRLIFAIATLNSLYIYDTES----------VPPIAILAGLHYAAI-----TDIAWSNNARYLALSSQ---DGY--- 353 (519)
Q Consensus 295 ~~~~~~~~~~~~~d~~i~vwd~~~----------~~~~~~~~~~~~~~i-----~~~~~s~~g~~l~~~~~---dg~--- 353 (519)
..++..-++.|.+||+.. .+.+..+.. |..+- ..+.++|||++|+++.. |..
T Consensus 344 ------aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV-~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~ 416 (595)
T 1fwx_A 344 ------AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNV 416 (595)
T ss_dssp ------EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCC
T ss_pred ------EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec-ccccccceeccceEeCCCCCEEEEcCCCCccccccC
Confidence 355566678999999876 556666665 44321 12356899999999754 332
Q ss_pred -------EEEEEecCCcccce
Q 010051 354 -------CTLVEFENDELGIP 367 (519)
Q Consensus 354 -------i~vwd~~~~~~~~~ 367 (519)
-.++|+..+++...
T Consensus 417 gp~~~~~~ql~dis~~~m~lv 437 (595)
T 1fwx_A 417 GPLKPENDQLIDISGDKMVLV 437 (595)
T ss_dssp CSSCCEEEEEEECSSSSCEEE
T ss_pred CCCCCCcceEEEcCCCcEEEE
Confidence 28899976665443
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.88 E-value=2.3e-05 Score=80.30 Aligned_cols=322 Identities=10% Similarity=0.036 Sum_probs=187.8
Q ss_pred CCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC--------CeEEEEEc
Q 010051 13 TKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG--------GELIIWKL 84 (519)
Q Consensus 13 ~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~i~vw~~ 84 (519)
...|.++...++|.+.+.. .+| |.+||..++............ -.-....|.++...+++ +-|..|+.
T Consensus 262 ~~~i~~i~~d~~g~lWigt-~~G-l~~~~~~~~~~~~~~~~~~~~--~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~ 337 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGT-FND-LNIYHEGTDSFASYSSNPVEN--GSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHP 337 (795)
T ss_dssp CSBEEEEEECTTSCEEEEE-SSC-EEEEETTTTEEEEECCCTTST--TSCSSSCEEEEEECTTSCEEEEESSSCEEEECG
T ss_pred CCeEEEEEEcCCCCEEEEe-CCh-hheEcCCCCeEEEEecCCCCC--CCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCC
Confidence 3569999999988866544 445 889998766533211100000 11133567777766653 55667765
Q ss_pred ccCCCcccceeeecc----ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc--------cccCeEEEE
Q 010051 85 HTTETGQAWKVLKNL----SFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA--------HFHYVQGVA 152 (519)
Q Consensus 85 ~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------h~~~v~~~~ 152 (519)
....- ...... .-....|.++...++|. |..|+.++-|..|+..++........ ....|.++.
T Consensus 338 ~~~~~----~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 338 IRNRF----KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp GGGSS----EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEE
T ss_pred Ccccc----eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEE
Confidence 44311 111110 11345699999988886 56677777799999887765432211 235789999
Q ss_pred EcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe
Q 010051 153 WDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF 232 (519)
Q Consensus 153 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 232 (519)
..++++.|..|+.++-|.+||..+++....... ........|.++...++|..
T Consensus 413 ~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~---------------------------~~~l~~~~v~~i~~d~~g~l 465 (795)
T 4a2l_A 413 VDEKKSLVYIGTHAGGLSILHRNSGQVENFNQR---------------------------NSQLVNENVYAILPDGEGNL 465 (795)
T ss_dssp EETTTTEEEEEETTTEEEEEETTTCCEEEECTT---------------------------TSCCSCSCEEEEEECSSSCE
T ss_pred EcCCCCEEEEEeCcCceeEEeCCCCcEEEeecC---------------------------CCCcCCCeeEEEEECCCCCE
Confidence 888887577777777799999877642111000 00011245778888888886
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccCC-------CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLP-------GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
.+.+. . .+.+|+..... ...+. -....|.++...++|. +..+
T Consensus 466 wigt~-~-----------Gl~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~g~-----------------lWig 514 (795)
T 4a2l_A 466 WLGTL-S-----------ALVRFNPEQRS--FTTIEKEKDGTPVVSKQITTLFRDSHKR-----------------LWIG 514 (795)
T ss_dssp EEEES-S-----------CEEEEETTTTE--EEECCBCTTCCBCCCCCEEEEEECTTCC-----------------EEEE
T ss_pred EEEec-C-----------ceeEEeCCCCe--EEEccccccccccCCceEEEEEECCCCC-----------------EEEE
Confidence 66543 2 45666654321 11111 1235688888888763 3333
Q ss_pred ecCCeEEEEeCCCCCceEEEe------ccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccC
Q 010051 306 ATLNSLYIYDTESVPPIAILA------GLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDE 379 (519)
Q Consensus 306 ~~d~~i~vwd~~~~~~~~~~~------~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 379 (519)
+. +-|..||..++.. .+. +.....|.++..+++|.+.++.. . .|..||..+..... + .........
T Consensus 515 t~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~-~--~~~~gl~~~ 586 (795)
T 4a2l_A 515 GE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKR-Y--NTTNGLPNN 586 (795)
T ss_dssp ES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEE-E--CGGGTCSCS
T ss_pred eC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEE-e--CCCCCCchh
Confidence 33 4588888776654 222 11345799999999998666543 3 58888876653321 1 111112234
Q ss_pred CCCcccccCCccEEEeecCCceeeecCCCCC
Q 010051 380 NKSPLVTKSEDMIIEASTNDKLVTAETKEPD 410 (519)
Q Consensus 380 ~~~~~~~s~~~~~l~~~~~d~~i~~~~~~~~ 410 (519)
.+.++...++|.+.+++ ..++..++.....
T Consensus 587 ~i~~i~~d~~g~lWi~t-~~Gl~~~~~~~~~ 616 (795)
T 4a2l_A 587 VVYGILEDSFGRLWLST-NRGISCFNPETEK 616 (795)
T ss_dssp CEEEEEECTTSCEEEEE-TTEEEEEETTTTE
T ss_pred heEEEEECCCCCEEEEc-CCceEEEcCCCCc
Confidence 56677777777665555 5677766655433
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.88 E-value=1.9e-07 Score=78.88 Aligned_cols=199 Identities=12% Similarity=0.177 Sum_probs=126.3
Q ss_pred ecCCCCCE--EEEEEecCCCEEEEEcCCC--cEEEEEecCCcccccccccccc--ccccccCcceeEEEEccCCCeEEEE
Q 010051 9 NWHDTKPV--LTLDFHPISGLLATGGADY--DIKIWLINSGEKQKKIPTASYQ--NSLSYHGSAINILRFSPCGGELIIW 82 (519)
Q Consensus 9 ~~~h~~~V--~~~~~sp~~~~la~~~~dg--~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~i~vw 82 (519)
.+.|...- ..|.|+ ++.++.+.+.+| .|+++|+.+++.+..+...... ..+....+.++.+.| .++.+.++
T Consensus 36 ~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw--~~~~v~v~ 112 (262)
T 3nol_A 36 SYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW--KNGLGFVW 112 (262)
T ss_dssp EEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES--SSSEEEEE
T ss_pred EecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe--eCCEEEEE
Confidence 34565544 889998 676666776665 8999999999988877543321 123334455555544 47889999
Q ss_pred EcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccc-----cCeEEEEEcCCC
Q 010051 83 KLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF-----HYVQGVAWDPLS 157 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~ 157 (519)
|..+. +.+.++.-.. .-..++ +|++.|+....++.|.++|..+.+.+..+.-.. ..+..+.|. +|
T Consensus 113 D~~t~------~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 113 NIRNL------RQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp ETTTC------CEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred ECccC------cEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 99877 4555544222 112333 568878877768889999999998887764321 334567776 67
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
..++..-.+..|.+.|..+++......+. +...... .......-.+.++|+|+++.|++++
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~----------~L~~~~~---------~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLN----------GILAEAG---------PLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECT----------TGGGGSC---------SCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECC----------cCccccc---------cccCcCCceEEEEEcCCCCEEEEEC
Confidence 65555556889999999998743322221 0000000 0001123467899999999888876
Q ss_pred CC
Q 010051 238 GS 239 (519)
Q Consensus 238 ~~ 239 (519)
..
T Consensus 244 K~ 245 (262)
T 3nol_A 244 KL 245 (262)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 243
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.87 E-value=1.2e-09 Score=100.52 Aligned_cols=224 Identities=13% Similarity=0.019 Sum_probs=112.9
Q ss_pred CCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccceeeeccccCC
Q 010051 24 ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHR 103 (519)
Q Consensus 24 ~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~ 103 (519)
++.+|++++.||.|+.||..+|+.+ |....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~---------------------------------W~~~~----------------- 37 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIK---------------------------------WTLKE----------------- 37 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEE---------------------------------EEEEC-----------------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEE---------------------------------EEecC-----------------
Confidence 4778999999999999999988753 22211
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccC-eE-EEEEcCCCCeEEEeeCCCeEEEEecCCCCccc
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHY-VQ-GVAWDPLSKYVASLSSDRTCRIYANRPTKSKG 181 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~-v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 181 (519)
..+.+..+..++..+++++.|+.|+.||..+|+.+..+..+... +. ...+. .+..+++++.++.|..||..+++...
T Consensus 38 ~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w 116 (369)
T 2hz6_A 38 DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ 116 (369)
T ss_dssp CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC------
T ss_pred CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 01112223356777787889999999999999877666543211 10 01111 34567888889999999999876421
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
.... . . ...++|++..+++++.+ +.++.||..+..
T Consensus 117 ~~~~-------------------------------~-~---~~~~~p~~~~v~~~~~d----------g~v~a~d~~tG~ 151 (369)
T 2hz6_A 117 TLSS-------------------------------A-F---ADSLSPSTSLLYLGRTE----------YTITMYDTKTRE 151 (369)
T ss_dssp ---------------------------------------------------EEEEEEE----------EEEECCCSSSSS
T ss_pred EecC-------------------------------C-C---cccccccCCEEEEEecC----------CEEEEEECCCCC
Confidence 1110 0 0 12345677777776554 578888876543
Q ss_pred cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEE-EEEEcC
Q 010051 262 RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAIT-DIAWSN 340 (519)
Q Consensus 262 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~-~~~~s~ 340 (519)
.. ..+..+ ......+.++. .....+++++.+|.|+.||..+++.+..+.. ..++. ...+++
T Consensus 152 ~~-W~~~~~--~~~~~~~~~~~-------------~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--~~pv~~~~~~~~ 213 (369)
T 2hz6_A 152 LR-WNATYF--DYAASLPEDDV-------------DYKMSHFVSNGDGLVVTVDSESGDVLWIQNY--ASPVVAFYVWQR 213 (369)
T ss_dssp CC-CEEEEE--EECCBCCCCCT-------------TCCCCEEEEETSCEEEEECTTTCCEEEEEEC--SSCEEEEEECTT
T ss_pred EE-EeEecc--cccCccccCCc-------------cccceEEEECCCCEEEEEECCCCcEEEEecC--CCceEEEEEecC
Confidence 21 111100 00001111110 0013477788899999999999998877664 34443 445666
Q ss_pred CCCEE----EEEeCCCcEEEEEecCCc
Q 010051 341 NARYL----ALSSQDGYCTLVEFENDE 363 (519)
Q Consensus 341 ~g~~l----~~~~~dg~i~vwd~~~~~ 363 (519)
+|... +.+ ++.++.+|..+++
T Consensus 214 dg~~~v~~~~~~--~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 214 EGLRKVMHINVA--VETLRYLTFMSGE 238 (369)
T ss_dssp SSCEEECCEEEE--HHHHHHHHHHHHH
T ss_pred CceEeccceeec--ccceeeeehhcCC
Confidence 66432 122 3456666665554
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.85 E-value=1.6e-06 Score=78.22 Aligned_cols=255 Identities=9% Similarity=-0.031 Sum_probs=138.4
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcc--
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQ-- 91 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~-- 91 (519)
....+++|++++++|.++..++.|..|+..++... .|.........
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~ 66 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV--------------------------------DFAYASPYWNKAF 66 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE--------------------------------EEEESCTTCCHHH
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE--------------------------------EEecccccccccc
Confidence 34567889999987888888888888876644321 11100000000
Q ss_pred -cceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc-----cccCeEEEEEcC-CCCeEEEee
Q 010051 92 -AWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA-----HFHYVQGVAWDP-LSKYVASLS 164 (519)
Q Consensus 92 -~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~-~~~~l~~~~ 164 (519)
.-............+..+++.+++..|+.+...+.|..+|..++.. ..+.. .......+++.+ +|+++++-.
T Consensus 67 ~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~ 145 (322)
T 2fp8_A 67 CENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDV 145 (322)
T ss_dssp HTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEES
T ss_pred cccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECC
Confidence 0000000000123478899987333455565556688888765543 22211 113467899999 887666543
Q ss_pred C-----------------CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 165 S-----------------DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 165 ~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
. ++.|..||..+++.... .. .......++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-----------------------------~~---~~~~p~gia~~ 193 (322)
T 2fp8_A 146 STLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL-----------------------------LK---ELHVPGGAEVS 193 (322)
T ss_dssp CSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE-----------------------------EE---EESCCCEEEEC
T ss_pred cccccccccceehcccCCCceEEEEeCCCCEEEEe-----------------------------cc---CCccCcceEEC
Confidence 2 35677777654421100 00 01223479999
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCc-ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEe
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIA 306 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~ 306 (519)
|+|++|+++... .+.|+.|++..... ....+..... ...+++.++|. +.++..
T Consensus 194 ~dg~~lyv~d~~---------~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~----------------l~va~~ 247 (322)
T 2fp8_A 194 ADSSFVLVAEFL---------SHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH----------------FWVSSS 247 (322)
T ss_dssp TTSSEEEEEEGG---------GTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC----------------EEEEEE
T ss_pred CCCCEEEEEeCC---------CCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC----------------EEEEec
Confidence 999977765322 25788888763210 0111101112 56677777773 333333
Q ss_pred c----------CCeEEEEeCCCCCceEEEeccc---cccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 307 T----------LNSLYIYDTESVPPIAILAGLH---YAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 307 ~----------d~~i~vwd~~~~~~~~~~~~~~---~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
. .+.|..+|.. ++.+..+.... ...++.+++ .+++++++....+.|.++++..
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 2 4678888874 77666665411 234667776 4666666666678899998764
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.83 E-value=2.4e-05 Score=80.06 Aligned_cols=320 Identities=9% Similarity=0.053 Sum_probs=180.1
Q ss_pred EEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcc-eeEEEEccC--------CCeEEEEEccc
Q 010051 16 VLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSA-INILRFSPC--------GGELIIWKLHT 86 (519)
Q Consensus 16 V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--------~~~i~vw~~~~ 86 (519)
|.++...++|.+.+... . .|.+||..+++.... .. .+ .... |.++...++ ++.|..|+..+
T Consensus 133 i~~i~~d~~g~lwi~t~-~-gl~~~~~~~~~~~~~-~~-----~~--~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~ 202 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTP-E-GLIMFDIKESKFIDD-SF-----ST--AMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQ 202 (795)
T ss_dssp CCEEEEEETTEEEEEET-T-EEEEEETTTTEEECS-SS-----CH--HHHTCCEEEEEEETTEEEEEESSSCEEEEETTT
T ss_pred EEEEEECCCCCEEEEEC-C-ceEEEECCCCEEEec-cC-----CC--CCCcceEEEEECCCCCEEEEECCCCEEEEeCCC
Confidence 88899988887666543 4 488999776543221 10 00 0011 444444333 34577777654
Q ss_pred CCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc-------cccCeEEEEEcCCCCe
Q 010051 87 TETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA-------HFHYVQGVAWDPLSKY 159 (519)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~ 159 (519)
... .... ...+...|.++...++|. |..|+.++-|.+||..+++....... ....|.++...+++.+
T Consensus 203 ~~~----~~~~-~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 276 (795)
T 4a2l_A 203 KTF----EKVI-PILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRL 276 (795)
T ss_dssp CCE----EECC-----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCE
T ss_pred CeE----EEec-CCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCE
Confidence 411 1111 112346788888887776 44555544499999877654432221 1356999999888775
Q ss_pred EEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCC
Q 010051 160 VASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGS 239 (519)
Q Consensus 160 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~ 239 (519)
.+ |+.+ -|.+|+..+........... ....-....|.++...++|...+.+..
T Consensus 277 Wi-gt~~-Gl~~~~~~~~~~~~~~~~~~------------------------~~~~l~~~~i~~i~~D~~g~lWigt~~- 329 (795)
T 4a2l_A 277 WI-GTFN-DLNIYHEGTDSFASYSSNPV------------------------ENGSLSQRSVRSIFMDSQGGMWLGTYF- 329 (795)
T ss_dssp EE-EESS-CEEEEETTTTEEEEECCCTT------------------------STTSCSSSCEEEEEECTTSCEEEEESS-
T ss_pred EE-EeCC-hhheEcCCCCeEEEEecCCC------------------------CCCCCCCCcEEEEEEeCCcCEEEEECC-
Confidence 44 4445 58888876543211000000 000012345888999998886665433
Q ss_pred cceeeeecccceEEEEeccCCCcccccC-----CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEE
Q 010051 240 YKISSMSESINSAYIFSRKDLSRPALQL-----PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIY 314 (519)
Q Consensus 240 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vw 314 (519)
+.+..|+.....-..... .-....|.++...++|. +..|+.++-|..|
T Consensus 330 ----------~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-----------------lWiGt~~~Gl~~~ 382 (795)
T 4a2l_A 330 ----------GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-----------------LWIGTNDGGLNLY 382 (795)
T ss_dssp ----------SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-----------------EEEEESSSCEEEE
T ss_pred ----------CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-----------------EEEEECCCCeEEE
Confidence 245566543221100000 01234688888877763 5556666679999
Q ss_pred eCCCCCceEEEec-------cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCccccc
Q 010051 315 DTESVPPIAILAG-------LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTK 387 (519)
Q Consensus 315 d~~~~~~~~~~~~-------~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 387 (519)
+..++........ .....|.++...++|+.|..|+.++.|.+|+..++.... +... ........+.++...
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~-~~~l~~~~v~~i~~d 460 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQR-NSQLVNENVYAILPD 460 (795)
T ss_dssp CTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTT-TSCCSCSCEEEEEEC
T ss_pred cCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecC-CCCcCCCeeEEEEEC
Confidence 9887654332211 123579999999999856667777789999987764322 1110 111223467777777
Q ss_pred CCccEEEeecCCceeeecCCC
Q 010051 388 SEDMIIEASTNDKLVTAETKE 408 (519)
Q Consensus 388 ~~~~~l~~~~~d~~i~~~~~~ 408 (519)
++|.+.+... +++..++...
T Consensus 461 ~~g~lwigt~-~Gl~~~~~~~ 480 (795)
T 4a2l_A 461 GEGNLWLGTL-SALVRFNPEQ 480 (795)
T ss_dssp SSSCEEEEES-SCEEEEETTT
T ss_pred CCCCEEEEec-CceeEEeCCC
Confidence 7777665554 6776665443
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.82 E-value=1.1e-06 Score=74.24 Aligned_cols=192 Identities=12% Similarity=0.179 Sum_probs=119.2
Q ss_pred eeeeccccCCCC--eEEEEEcCCCCEEEEEeCCC--eEEEEEcCCCceEEEecccccCeE--EEEEcCCCCeEEEee-CC
Q 010051 94 KVLKNLSFHRKD--VLDLQWSTDGAFLLSGSVDN--SCIIWDVNKGSVLQILDAHFHYVQ--GVAWDPLSKYVASLS-SD 166 (519)
Q Consensus 94 ~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~~~~-~d 166 (519)
+.+..+. |... ...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ... .+++ +++.|+... .+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~--~g~~ly~ltw~~ 106 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISD--WKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEE--ETTEEEEEESSS
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEE--eCCEEEEEEeeC
Confidence 3444443 4433 4788998 666666666666 89999999999988775432 333 3444 355555544 58
Q ss_pred CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeee
Q 010051 167 RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMS 246 (519)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~ 246 (519)
+.+.+||..+.+........ . ....++++++.|+.+.++
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~--------------------------------~--eG~glt~dg~~L~~SdGs------- 145 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYD--------------------------------G--EGWGLTHNDQYLIMSDGT------- 145 (262)
T ss_dssp SEEEEEETTTCCEEEEEECS--------------------------------S--CCCCEEECSSCEEECCSS-------
T ss_pred CEEEEEECccCcEEEEEECC--------------------------------C--CceEEecCCCEEEEECCC-------
Confidence 89999999887632211110 0 123445678888876654
Q ss_pred cccceEEEEeccCCCcccccCC-CCC---CCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCce
Q 010051 247 ESINSAYIFSRKDLSRPALQLP-GAS---KPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPI 322 (519)
Q Consensus 247 ~~~~~i~i~~~~~~~~~~~~~~-~~~---~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 322 (519)
+.++++|..+......... ... ..++.+.|. +| ...+..-.++.|.+.|..+++.+
T Consensus 146 ---~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G----------------~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 146 ---PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG----------------EIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp ---SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT----------------EEEEEETTSSEEEEECTTTCBEE
T ss_pred ---CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC----------------EEEEEEccCCeEEEEECCCCcEE
Confidence 5788888765432111111 111 234455665 44 33344445789999999999998
Q ss_pred EEEecc--c---------cccEEEEEEcCCCCEEEEEeCC
Q 010051 323 AILAGL--H---------YAAITDIAWSNNARYLALSSQD 351 (519)
Q Consensus 323 ~~~~~~--~---------~~~i~~~~~s~~g~~l~~~~~d 351 (519)
..+... . ....+.|+|+|+++.|++.+..
T Consensus 206 ~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 206 GIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 887641 0 1245889999998877776643
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.78 E-value=9.5e-06 Score=72.48 Aligned_cols=238 Identities=13% Similarity=0.086 Sum_probs=127.8
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccc
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAW 93 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~ 93 (519)
.....++|+++|+++++-..++.|..||..... ..+|..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~--------------------------------~~~~~~--------- 70 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ--------------------------------QIHATV--------- 70 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE--------------------------------EEEEEC---------
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce--------------------------------EEEEeC---------
Confidence 567889999998877776667777777654211 111211
Q ss_pred eeeeccccCCCCeEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCceEEEecc-cccCeEEEEEcCCCCeEEEeeCCCeEE
Q 010051 94 KVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD--NSCIIWDVNKGSVLQILDA-HFHYVQGVAWDPLSKYVASLSSDRTCR 170 (519)
Q Consensus 94 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~i~ 170 (519)
...+..+++.++|+++++.... ..|..+|..+++....... .......++..+++..+++-..++.|.
T Consensus 71 ---------~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~ 141 (306)
T 2p4o_A 71 ---------EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIW 141 (306)
T ss_dssp ---------SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEE
T ss_pred ---------CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEE
Confidence 1246788999999865554332 2477778777765432221 122334555555554445444578888
Q ss_pred EEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccc
Q 010051 171 IYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESIN 250 (519)
Q Consensus 171 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~ 250 (519)
++|...++.... ..... .. .......-.....+ +|++++|+++... .+
T Consensus 142 ~~d~~~~~~~v~---------~~~~~---~~---------~~~~~~~~~~pngi--s~dg~~lyv~d~~---------~~ 189 (306)
T 2p4o_A 142 LIDVVQPSGSIW---------LEHPM---LA---------RSNSESVFPAANGL--KRFGNFLYVSNTE---------KM 189 (306)
T ss_dssp EEETTTTEEEEE---------EECGG---GS---------CSSTTCCSCSEEEE--EEETTEEEEEETT---------TT
T ss_pred EEeCCCCcEeEE---------EECCc---cc---------cccccCCCCcCCCc--CcCCCEEEEEeCC---------CC
Confidence 888764311000 00000 00 00000000122344 7888877765433 26
Q ss_pred eEEEEeccCCCcc--cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEE--Ee
Q 010051 251 SAYIFSRKDLSRP--ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAI--LA 326 (519)
Q Consensus 251 ~i~i~~~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~--~~ 326 (519)
.|+.|+....... ...+. .......+++.++| +++++....+.|.+++.. ++.... +.
T Consensus 190 ~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG----------------~l~va~~~~~~V~~~~~~-G~~~~~~~~~ 251 (306)
T 2p4o_A 190 LLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEG----------------NLYGATHIYNSVVRIAPD-RSTTIIAQAE 251 (306)
T ss_dssp EEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTC----------------CEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred EEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCC----------------CEEEEeCCCCeEEEECCC-CCEEEEeecc
Confidence 8888887641110 00000 00122345556655 444555556789999975 554332 22
Q ss_pred ccccccEEEEEEc---CCCCEEEEEeCCC
Q 010051 327 GLHYAAITDIAWS---NNARYLALSSQDG 352 (519)
Q Consensus 327 ~~~~~~i~~~~~s---~~g~~l~~~~~dg 352 (519)
. .....++++|. |+++.|++++..+
T Consensus 252 ~-~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 Q-GVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp G-TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred c-ccCCceEEEEecccCCCCEEEEECCCC
Confidence 2 23568999998 8888777766543
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.77 E-value=2.6e-06 Score=84.82 Aligned_cols=78 Identities=8% Similarity=-0.022 Sum_probs=53.9
Q ss_pred cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccc
Q 010051 307 TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVT 386 (519)
Q Consensus 307 ~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
.+|.|..||+.+++.+-.... ..+.....+...+.++++++.||.|++||..+++....+.+... ..-..+.+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~-----~~~~p~~~ 508 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSG-----IVAAPMTF 508 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEE
T ss_pred ccceEEEEeCCCCcEEEEccC--CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCC-----cccCceEE
Confidence 348899999999998877664 23344445556788999999999999999999876655554321 12234455
Q ss_pred cCCcc
Q 010051 387 KSEDM 391 (519)
Q Consensus 387 s~~~~ 391 (519)
..+|+
T Consensus 509 ~~~G~ 513 (668)
T 1kv9_A 509 ELAGR 513 (668)
T ss_dssp EETTE
T ss_pred EECCE
Confidence 56665
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.77 E-value=9.6e-07 Score=74.50 Aligned_cols=200 Identities=9% Similarity=0.085 Sum_probs=128.2
Q ss_pred EecCCCCC--EEEEEEecCCCEEEEEcCCCcEEEEEecCCcccccccccccc--ccccccCcceeEEEEccCCCeEEEEE
Q 010051 8 INWHDTKP--VLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQ--NSLSYHGSAINILRFSPCGGELIIWK 83 (519)
Q Consensus 8 ~~~~h~~~--V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~i~vw~ 83 (519)
..+.|... ...|.|+ ++.++.+.+.+|.|+++|+++++.+..+ ..... ..+....+.++.+.| .++.+.+||
T Consensus 47 ~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw--~~~~v~V~D 122 (268)
T 3nok_A 47 REYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW--TEGLLFTWS 122 (268)
T ss_dssp EEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES--SSCEEEEEE
T ss_pred EEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc--cCCEEEEEE
Confidence 33456444 4688888 4566677888889999999999988876 33221 223444555655544 578999999
Q ss_pred cccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccc-----cCeEEEEEcCCCC
Q 010051 84 LHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF-----HYVQGVAWDPLSK 158 (519)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~ 158 (519)
..+. +.+.++.... .-..++ +|++.|+.+..++.|.++|..+.+.+..+.-.. ..++.+.|. +|.
T Consensus 123 ~~Tl------~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 123 GMPP------QRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp TTTT------EEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred CCcC------cEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 9877 5555554322 223444 568888888778999999999998887764322 245677877 676
Q ss_pred eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecC
Q 010051 159 YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAG 238 (519)
Q Consensus 159 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~ 238 (519)
.++..-.+..|.+.|..+++......+.... ..... .......-.+.++|+|+++.|++++.
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~----------~~~~~--------~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDASALT----------RAVAG--------QVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECHHHH----------HHHTT--------TCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECCCCc----------ccccc--------cccCcCCceEEEEEcCCCCEEEEeCC
Confidence 5555556889999999998743332221000 00000 00011234678999999888887654
Q ss_pred C
Q 010051 239 S 239 (519)
Q Consensus 239 ~ 239 (519)
.
T Consensus 255 ~ 255 (268)
T 3nok_A 255 L 255 (268)
T ss_dssp T
T ss_pred C
Confidence 3
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.76 E-value=1.3e-05 Score=70.07 Aligned_cols=181 Identities=11% Similarity=0.038 Sum_probs=105.6
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC---CCeEEEEecCCCCc
Q 010051 104 KDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS---DRTCRIYANRPTKS 179 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~ 179 (519)
.....+++++++..|+.+. ..+.|.++++........+.........++++|++..|+.+.. .+.|..+++.....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 4568889998766665544 4678999998644322222222245689999997666655543 36788887754321
Q ss_pred cccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccC
Q 010051 180 KGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKD 259 (519)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~ 259 (519)
. .+ .... ......++++|++.+|+++.... +.|..++...
T Consensus 159 ~-----------~~-------------------~~~~-~~~P~gia~d~~~~~lyv~d~~~---------~~I~~~~~~g 198 (267)
T 1npe_A 159 R-----------IL-------------------AQDN-LGLPNGLTFDAFSSQLCWVDAGT---------HRAECLNPAQ 198 (267)
T ss_dssp E-----------EE-------------------ECTT-CSCEEEEEEETTTTEEEEEETTT---------TEEEEEETTE
T ss_pred E-----------EE-------------------EECC-CCCCcEEEEcCCCCEEEEEECCC---------CEEEEEecCC
Confidence 0 00 0001 13456899999888777665432 5778887753
Q ss_pred CCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEc
Q 010051 260 LSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWS 339 (519)
Q Consensus 260 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s 339 (519)
... ...+... .....++.. +. ..+++....+.|.++|..+++.+..+..........+++.
T Consensus 199 ~~~-~~~~~~~-~~P~gi~~d--~~---------------~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~ 259 (267)
T 1npe_A 199 PGR-RKVLEGL-QYPFAVTSY--GK---------------NLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA 259 (267)
T ss_dssp EEE-EEEEECC-CSEEEEEEE--TT---------------EEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred Cce-EEEecCC-CCceEEEEe--CC---------------EEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeec
Confidence 211 1111111 122334332 11 3344445568999999999988888764122246777888
Q ss_pred CCCC
Q 010051 340 NNAR 343 (519)
Q Consensus 340 ~~g~ 343 (519)
|++.
T Consensus 260 ~~~~ 263 (267)
T 1npe_A 260 LSQC 263 (267)
T ss_dssp CSCC
T ss_pred CccC
Confidence 7764
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.74 E-value=1.1e-06 Score=87.72 Aligned_cols=245 Identities=8% Similarity=-0.020 Sum_probs=126.6
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCceEEEeccccc-CeEEEEEcCCCCeEEEee-CC-----CeEEEEecCC
Q 010051 105 DVLDLQWSTDGAFLLSGSV-DNSCIIWDVNKGSVLQILDAHFH-YVQGVAWDPLSKYVASLS-SD-----RTCRIYANRP 176 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~ 176 (519)
...++++..+++.++.|+. +..+.+||..+++....-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 3445778889999999884 55899999988765432211111 113455667899999988 34 4688999877
Q ss_pred CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEe
Q 010051 177 TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFS 256 (519)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~ 256 (519)
.+.......... . +... .. ...+..++..+++++.++.+. .......+..||
T Consensus 324 ~~W~~~~~~~~~----------p-----------~~~~-~~-----~~~~~~~~~iyv~Gg~~g~~~-~~~~~~~v~~yd 375 (656)
T 1k3i_A 324 KTWTSLPNAKVN----------P-----------MLTA-DK-----QGLYRSDNHAWLFGWKKGSVF-QAGPSTAMNWYY 375 (656)
T ss_dssp TEEEEETTSCSG----------G-----------GCCC-CT-----TGGGTTTCSCCEEECGGGCEE-ECCSSSEEEEEE
T ss_pred CcceeCCCcccc----------c-----------cccc-cc-----cceeecCCceEEEECCCCcEE-EecCccceeeee
Confidence 642211000000 0 0000 00 011123444444444332221 111234677888
Q ss_pred ccCCCccc--ccCC------CCCCCeEEEEEcC-CcccccccCCCCcccccceEEEEEecCC-----------eEEEEeC
Q 010051 257 RKDLSRPA--LQLP------GASKPVVAVRFCP-LAFNLRESNSAGFFKLPYRLIFAIATLN-----------SLYIYDT 316 (519)
Q Consensus 257 ~~~~~~~~--~~~~------~~~~~v~~~~~sp-~~~~l~~~~~~g~~~~~~~~~~~~~~d~-----------~i~vwd~ 316 (519)
........ .... .....-.++.|.. ++ ++++.|+.++ .|.+||.
T Consensus 376 ~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~----------------~i~v~GG~~~~~~~~~~~~~~~v~~yd~ 439 (656)
T 1k3i_A 376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG----------------KILTFGGSPDYQDSDATTNAHIITLGEP 439 (656)
T ss_dssp CSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTT----------------EEEEECCBSSSSSSBCCCCEEEEECCST
T ss_pred cCCcceeecCCccccccccCCCCCCCceEeccCCCC----------------eEEEEeCCCCCCCCCcCCcceEEEcCCC
Confidence 76432110 0000 0011123333332 33 3445554321 6888888
Q ss_pred CCCCceEEE--ecccccc-EEEEEEcCCCCEEEEEeCC-----------CcEEEEEecCCcccceeeecCCcccccCCCC
Q 010051 317 ESVPPIAIL--AGLHYAA-ITDIAWSNNARYLALSSQD-----------GYCTLVEFENDELGIPISLSGNKVSKDENKS 382 (519)
Q Consensus 317 ~~~~~~~~~--~~~~~~~-i~~~~~s~~g~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 382 (519)
.+..-.... .. +... -.+++..|+|++++.|+.+ ..+.+||..+......-.++. ......
T Consensus 440 ~~~~W~~~~~~~m-p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~----~R~~hs 514 (656)
T 1k3i_A 440 GTSPNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI----VRVYHS 514 (656)
T ss_dssp TSCCEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS----CCCTTE
T ss_pred CCCCeeEEccCCC-CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC----cccccc
Confidence 776544332 11 2222 2345677899999999865 468999988764332111111 112223
Q ss_pred cccccCCccEEEeecC
Q 010051 383 PLVTKSEDMIIEASTN 398 (519)
Q Consensus 383 ~~~~s~~~~~l~~~~~ 398 (519)
...+.+||+++++|+.
T Consensus 515 ~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 515 ISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECTTSCEEEEECC
T ss_pred HhhcCCCcEEEecCCC
Confidence 3456789999999885
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.69 E-value=1.7e-05 Score=70.89 Aligned_cols=230 Identities=10% Similarity=0.028 Sum_probs=124.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCC-C-eEEEEecCCCCccc
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSD-R-TCRIYANRPTKSKG 181 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g-~i~iwd~~~~~~~~ 181 (519)
.....++|+++|+++++-..++.|..||.... ....+. ....+..+++.++++++++.... + .|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 56789999999986666667899999998653 333332 23468899999999866554332 2 46666665553211
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
.... ........++..+++..+++-... +.++.+|.....
T Consensus 110 ~~~~------------------------------~~~~~~~g~~~~~~~~~~v~d~~~----------g~i~~~d~~~~~ 149 (306)
T 2p4o_A 110 LLTL------------------------------PDAIFLNGITPLSDTQYLTADSYR----------GAIWLIDVVQPS 149 (306)
T ss_dssp EEEC------------------------------TTCSCEEEEEESSSSEEEEEETTT----------TEEEEEETTTTE
T ss_pred EEeC------------------------------CCccccCcccccCCCcEEEEECCC----------CeEEEEeCCCCc
Confidence 0000 000112234444444434433233 466666653210
Q ss_pred cccc---------cCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCC-CCc--eEEEeccc
Q 010051 262 RPAL---------QLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTES-VPP--IAILAGLH 329 (519)
Q Consensus 262 ~~~~---------~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~-~~~--~~~~~~~~ 329 (519)
..+. .........+.+ +|++.. ++++-...+.|..|++.. +.. ...+..
T Consensus 150 ~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~---------------lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-- 210 (306)
T 2p4o_A 150 GSIWLEHPMLARSNSESVFPAANGL--KRFGNF---------------LYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-- 210 (306)
T ss_dssp EEEEEECGGGSCSSTTCCSCSEEEE--EEETTE---------------EEEEETTTTEEEEEEBCTTSCBCCCEEEEE--
T ss_pred EeEEEECCccccccccCCCCcCCCc--CcCCCE---------------EEEEeCCCCEEEEEEeCCCCCCCccEEEec--
Confidence 0000 011111233444 666532 244445568999999874 322 122221
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCccccc---CCccEEEeecCC
Q 010051 330 YAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTK---SEDMIIEASTND 399 (519)
Q Consensus 330 ~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~l~~~~~d 399 (519)
......++++++|+++++....+.|.+++.. ++......... ......+++|. +++..|......
T Consensus 211 ~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~----~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 211 QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ----GVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG----TCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc----ccCCceEEEEecccCCCCEEEEECCC
Confidence 1345678999999887776667889998864 32211111111 12346778887 786666555443
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.68 E-value=7.9e-06 Score=81.31 Aligned_cols=153 Identities=8% Similarity=-0.012 Sum_probs=93.0
Q ss_pred CCEEEEEcCCCcEEEEEecCCccccccccccccc--cccc----cCcceeEEEEccC------CCeEEEEEcccCCCccc
Q 010051 25 SGLLATGGADYDIKIWLINSGEKQKKIPTASYQN--SLSY----HGSAINILRFSPC------GGELIIWKLHTTETGQA 92 (519)
Q Consensus 25 ~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~----~~~~v~~~~~~~~------~~~i~vw~~~~~~~~~~ 92 (519)
+..|++++.|+.|..+|..+|+.+.++....... .... ..+. +.+... ++.|..+|..+++..-.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~---v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGK---VIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTE---EEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCE---EEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 5577888889999999999999876654321100 0000 1111 222211 47888888887732211
Q ss_pred ceeeecc-------------------------ccCCCCeEEEEEcCCCCEEEEEeCCC-------------------eEE
Q 010051 93 WKVLKNL-------------------------SFHRKDVLDLQWSTDGAFLLSGSVDN-------------------SCI 128 (519)
Q Consensus 93 ~~~~~~~-------------------------~~~~~~v~~~~~s~~~~~l~~~~~dg-------------------~i~ 128 (519)
+.....- .++......+++.+++..++.++.++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 1100000 00111123478888888888887765 499
Q ss_pred EEEcCCCceEEEecc--cc-------cCeEEEEEcCCCC---eEEEeeCCCeEEEEecCCCCcc
Q 010051 129 IWDVNKGSVLQILDA--HF-------HYVQGVAWDPLSK---YVASLSSDRTCRIYANRPTKSK 180 (519)
Q Consensus 129 vwd~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~ 180 (519)
.+|..+|+.+..++. |. .+.....+..+++ .++.++.+|.+.++|..+++..
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 999999998877654 22 2222223333564 6889999999999999998754
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.66 E-value=1.9e-05 Score=76.95 Aligned_cols=83 Identities=10% Similarity=0.012 Sum_probs=54.0
Q ss_pred cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccc
Q 010051 307 TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVT 386 (519)
Q Consensus 307 ~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
.++.|..||+.+++.+-.+.. ...+....+...+..+++++.||.|+.||..+++....+.+.... .-..+.+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~-----~~~p~~~ 514 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG-----IGSPMTY 514 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-----CSCCEEE
T ss_pred CCCeEEEEECCCCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc-----EeeeEEE
Confidence 358999999999998877754 233333333345667788999999999999998766555443211 1233445
Q ss_pred cCCccEEEee
Q 010051 387 KSEDMIIEAS 396 (519)
Q Consensus 387 s~~~~~l~~~ 396 (519)
..+|+.++..
T Consensus 515 ~~~G~~yv~~ 524 (571)
T 2ad6_A 515 SFKGKQYIGS 524 (571)
T ss_dssp EETTEEEEEE
T ss_pred EECCEEEEEE
Confidence 5677655443
No 255
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=0.00058 Score=69.72 Aligned_cols=326 Identities=9% Similarity=-0.030 Sum_probs=180.5
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC--------CCeEEEEEcc
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC--------GGELIIWKLH 85 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~i~vw~~~ 85 (519)
..|.++...++|.+.+.. .. -+.+||..+++........... .......|.++...++ ++-|.+++..
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~--~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNI--HGALSSYIFSIKQLKDNKLWIATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-------------CCCCEEEEEECTTSEEEEEESSSCEEEEETT
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCcc--ccccCceEEEEEECCCCCEEEEeCCCCeEEECCC
Confidence 569999999888766654 34 4889998766433211000000 0012345666665444 2567777765
Q ss_pred cCCCcccce----ee-e---ccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEec---------ccccCe
Q 010051 86 TTETGQAWK----VL-K---NLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILD---------AHFHYV 148 (519)
Q Consensus 86 ~~~~~~~~~----~~-~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---------~h~~~v 148 (519)
......... .+ . ........|.++...++|. |..|+.++-|..++..++....... .....|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 542110000 00 0 0112346799999988886 6667777779999987655332211 123568
Q ss_pred EEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc
Q 010051 149 QGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP 228 (519)
Q Consensus 149 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 228 (519)
.++...+++. |..|+.++-|..|+..+....... . ........|.++...+
T Consensus 366 ~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~-~---------------------------~~~~~~~~v~~i~~d~ 416 (781)
T 3v9f_A 366 SSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNK-E---------------------------NRELLSNSVLCSLKDS 416 (781)
T ss_dssp EEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC---------------------------------CCCSBEEEEEECT
T ss_pred EEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEcc-C---------------------------CCCCCCcceEEEEECC
Confidence 9998887766 555666666888887653211000 0 0001234577888888
Q ss_pred CCCeEEEecCCcceeeeecccceEEEEeccCCCcccccC---CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE
Q 010051 229 DGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQL---PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 229 ~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
+|...+.+ .. +.+..++..... ...+ ......|.++...+++. +..+
T Consensus 417 ~g~lWigt-~~----------~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g~-----------------lwig 466 (781)
T 3v9f_A 417 EGNLWFGT-YL----------GNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKNKK-----------------IWIG 466 (781)
T ss_dssp TSCEEEEE-TT----------EEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTTSE-----------------EEEE
T ss_pred CCCEEEEe-cc----------CCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCCCC-----------------EEEE
Confidence 88766643 32 356666654321 1111 12345688888877762 3444
Q ss_pred ecCCeEEEEeCCCCCceEEEecc----ccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCC
Q 010051 306 ATLNSLYIYDTESVPPIAILAGL----HYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENK 381 (519)
Q Consensus 306 ~~d~~i~vwd~~~~~~~~~~~~~----~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 381 (519)
+. +-|..||..+++........ ....|.++...++|.+.+. +.++-|..|+..+..... ...........+
T Consensus 467 t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~---~~~~~~l~~~~i 541 (781)
T 3v9f_A 467 TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRK---FNQYEGFCSNTI 541 (781)
T ss_dssp ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEE---ECTTTTCSCSCE
T ss_pred EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEE---ccCCCCCCCCee
Confidence 44 56889998876654433220 1357999999999986654 444447777766543221 111111223456
Q ss_pred CcccccCCccEEEeecCCce-eeecCCCC
Q 010051 382 SPLVTKSEDMIIEASTNDKL-VTAETKEP 409 (519)
Q Consensus 382 ~~~~~s~~~~~l~~~~~d~~-i~~~~~~~ 409 (519)
.++...++|.+.++.. .+. ..++....
T Consensus 542 ~~i~~d~~g~lWi~T~-~Glv~~~d~~~~ 569 (781)
T 3v9f_A 542 NQIYRSSKGQMWLATG-EGLVCFPSARNF 569 (781)
T ss_dssp EEEEECTTSCEEEEET-TEEEEESCTTTC
T ss_pred EEEEECCCCCEEEEEC-CCceEEECCCCC
Confidence 7777778887665555 677 55554433
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.63 E-value=1e-05 Score=67.66 Aligned_cols=200 Identities=10% Similarity=0.096 Sum_probs=125.9
Q ss_pred ecCCCCC--EEEEEEecCCCEEEEEcCC--CcEEEEEecCCcccccccccccc--ccccccCcceeEEEEccCCCeEEEE
Q 010051 9 NWHDTKP--VLTLDFHPISGLLATGGAD--YDIKIWLINSGEKQKKIPTASYQ--NSLSYHGSAINILRFSPCGGELIIW 82 (519)
Q Consensus 9 ~~~h~~~--V~~~~~sp~~~~la~~~~d--g~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~i~vw 82 (519)
.+.|... .-.|.|++ +.++.+.+.+ ..|+++|+.+++.+..+...... ..+....+.++.+.| .++.+.++
T Consensus 14 ~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw--~~~~v~v~ 90 (243)
T 3mbr_X 14 RYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW--RNHEGFVY 90 (243)
T ss_dssp EEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES--SSSEEEEE
T ss_pred EcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe--eCCEEEEE
Confidence 3456544 56899986 5566666654 48999999999988877543221 223334455555543 36889999
Q ss_pred EcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccc-----cCeEEEEEcCCC
Q 010051 83 KLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHF-----HYVQGVAWDPLS 157 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~ 157 (519)
|..+. +.+.++.... .-..++ ++++.|+.+..++.|.++|..+.+.+..+.-.. ..++.+.|. +|
T Consensus 91 D~~tl------~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 91 DLATL------TPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp ETTTT------EEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred ECCcC------cEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 99877 5555554322 224444 567777777778999999999998887775422 345667776 56
Q ss_pred CeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 158 KYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 158 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
+.++..-.+..|.+.|..+++......+... ..... . .......-.+.++++|+++.|++++
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l----------~~~~~------~--~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQAL----------VPDAD------A--LTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGG----------STTTT------S--CCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcC----------ccccc------c--ccCCcCCceEEEEEcCCCCEEEEEC
Confidence 6555555678999999999874332222110 00000 0 0001223567999999988888876
Q ss_pred CC
Q 010051 238 GS 239 (519)
Q Consensus 238 ~~ 239 (519)
..
T Consensus 223 K~ 224 (243)
T 3mbr_X 223 KR 224 (243)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=7.4e-06 Score=82.91 Aligned_cols=201 Identities=10% Similarity=0.082 Sum_probs=113.9
Q ss_pred CeEEEEEc-CCCCEEEEEeC-C----CeEEEEEcCCC-ceEE-EecccccCeEEEEEcCCCCeEEEeeCC-----CeEEE
Q 010051 105 DVLDLQWS-TDGAFLLSGSV-D----NSCIIWDVNKG-SVLQ-ILDAHFHYVQGVAWDPLSKYVASLSSD-----RTCRI 171 (519)
Q Consensus 105 ~v~~~~~s-~~~~~l~~~~~-d----g~i~vwd~~~~-~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~i 171 (519)
.+...+|| |||++||.+.. + .+|+++|+.++ +.+. .+. .....+.|+||++.|+....+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99998886543 2 35999999998 6321 111 123468899999988777665 24666
Q ss_pred EecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccce
Q 010051 172 YANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINS 251 (519)
Q Consensus 172 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~ 251 (519)
+++.++.... ..++.. ........+.|||||++|+...... ....
T Consensus 252 ~~lgt~~~~~---------------------------~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~-------~~~~ 296 (751)
T 2xe4_A 252 HVMGKLQSED---------------------------VCLYEE-HNPLFSAFMYKAADTNTLCIGSQSP-------ETAE 296 (751)
T ss_dssp EETTSCGGGC---------------------------EEEEEC-CCTTCEEEEEECTTSSEEEEEEECS-------SCEE
T ss_pred EECCCCchhc---------------------------EEEEec-CCCceEEEEEECCCCCEEEEEecCC-------CCce
Confidence 6665542110 001111 1123345789999999999876432 2357
Q ss_pred EEEEeccCCC-cc--cccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec----CCeEEEEeCCCC-CceE
Q 010051 252 AYIFSRKDLS-RP--ALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT----LNSLYIYDTESV-PPIA 323 (519)
Q Consensus 252 i~i~~~~~~~-~~--~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~----d~~i~vwd~~~~-~~~~ 323 (519)
++++|+.... .. .............+.|+..+ .+++.... ...|..+++.++ ....
T Consensus 297 l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~----------------~l~~~t~~~~a~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 297 VHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS----------------HLVILTNEGGAVNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp EEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT----------------EEEEEECTTTCTTCEEEEEETTSTTCCCC
T ss_pred EEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC----------------EEEEEeCCCCCCCcEEEEEcCCCccccee
Confidence 8899987642 22 22333344455555554333 22333222 247788887653 2222
Q ss_pred -EEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEec
Q 010051 324 -ILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 324 -~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~ 360 (519)
.+.......+..+.+. .+.++++...+|..+||-++
T Consensus 361 ~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 361 VLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp EEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred eEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence 2322112245666665 33455667777865555443
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.61 E-value=4.6e-06 Score=70.39 Aligned_cols=178 Identities=8% Similarity=0.055 Sum_probs=111.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCe--EEEEEcCCCCeEE-EeeCCCeEEEEecCCCCccc
Q 010051 105 DVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYV--QGVAWDPLSKYVA-SLSSDRTCRIYANRPTKSKG 181 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~ 181 (519)
....+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ -. ... ..+++. ++.|+ ..-.++.+.+||..+.+...
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEE
Confidence 34788887 3556667777889999999999988777 22 233 335554 44444 44468899999998875322
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
.... . . ....+.++++.|+++.++ +.++++|..+..
T Consensus 131 ti~~-----------------------------~---~--eGwGLt~Dg~~L~vSdGs----------~~l~~iDp~T~~ 166 (268)
T 3nok_A 131 TTRY-----------------------------S---G--EGWGLCYWNGKLVRSDGG----------TMLTFHEPDGFA 166 (268)
T ss_dssp EEEC-----------------------------S---S--CCCCEEEETTEEEEECSS----------SEEEEECTTTCC
T ss_pred EEeC-----------------------------C---C--ceeEEecCCCEEEEECCC----------CEEEEEcCCCCe
Confidence 1111 0 0 123334678888887655 688888876543
Q ss_pred cccccCC--CCC---CCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEecc--------
Q 010051 262 RPALQLP--GAS---KPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGL-------- 328 (519)
Q Consensus 262 ~~~~~~~--~~~---~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-------- 328 (519)
. ...+. .+. ..++.+.|. +| ...+....++.|.+.|..+++.+..+...
T Consensus 167 v-~~~I~V~~~g~~v~~lNeLe~~-dG----------------~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~ 228 (268)
T 3nok_A 167 L-VGAVQVKLRGQPVELINELECA-NG----------------VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAG 228 (268)
T ss_dssp E-EEEEECEETTEECCCEEEEEEE-TT----------------EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTT
T ss_pred E-EEEEEeCCCCcccccccccEEe-CC----------------EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccc
Confidence 2 11111 111 234555655 44 33334445789999999999998887641
Q ss_pred ----ccccEEEEEEcCCCCEEEEEe
Q 010051 329 ----HYAAITDIAWSNNARYLALSS 349 (519)
Q Consensus 329 ----~~~~i~~~~~s~~g~~l~~~~ 349 (519)
-....+.|+|+|+++.|++.+
T Consensus 229 ~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 229 QVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccCcCCceEEEEEcCCCCEEEEeC
Confidence 013568899999876655554
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=0.00061 Score=69.56 Aligned_cols=332 Identities=11% Similarity=0.027 Sum_probs=178.3
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCC-------CeEEEEEccc
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCG-------GELIIWKLHT 86 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~i~vw~~~~ 86 (519)
..|.++...++|.+.+ |+.++-|..||..+++.............+ ....|.++...+++ +-|.+||..+
T Consensus 163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l--~~~~i~~i~~d~~g~lwigt~~Gl~~~d~~~ 239 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSL--PGNDVRCIYKDTNGNIWIGTSKGLALFNANT 239 (781)
T ss_dssp CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC----------CCSSEEEEEECTTCCEEEEETTEEEEEETTT
T ss_pred cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccC--CCCceeEEEEcCCCCEEEEeCCcHheECCCC
Confidence 5688888888876655 444545888987765432211000000001 12446666554442 3577777654
Q ss_pred CCCcccceeeecc-----ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEec--------------ccccC
Q 010051 87 TETGQAWKVLKNL-----SFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILD--------------AHFHY 147 (519)
Q Consensus 87 ~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------~h~~~ 147 (519)
... ...... ......|.++...++|. |..|+..+-|.++|..++....... .....
T Consensus 240 ~~~----~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~ 314 (781)
T 3v9f_A 240 ETF----TNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNAS 314 (781)
T ss_dssp TEE----EC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSC
T ss_pred CcE----EEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCe
Confidence 311 111100 11245699999888776 5556664568899987765322111 12357
Q ss_pred eEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 148 VQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 148 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
|.++...++|. |..|+.++-|..++.............. .. .........|.++...
T Consensus 315 v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~--------~~--------------~~~~l~~~~v~~i~~d 371 (781)
T 3v9f_A 315 ARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPT--------QM--------------NESSLSNKVVSSVCDD 371 (781)
T ss_dssp EEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC------------CC--------------CSSCCSSSCEEEEEEC
T ss_pred EEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcc--------cc--------------ccCCCCCcceEEEEEc
Confidence 89999888776 5567767778888876543211100000 00 0000112457788888
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCccccc--CCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEE
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQ--LPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAI 305 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~ 305 (519)
++|...+.+.. +.+..|+.......... .......|.++...++|. +..|
T Consensus 372 ~~g~lWigt~~-----------~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-----------------lWig 423 (781)
T 3v9f_A 372 GQGKLWIGTDG-----------GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-----------------LWFG 423 (781)
T ss_dssp TTSCEEEEEBS-----------SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-----------------EEEE
T ss_pred CCCCEEEEeCC-----------CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-----------------EEEE
Confidence 88876654323 24566665422110000 012335677887776652 4456
Q ss_pred ecCCeEEEEeCCCCCceEEEe-ccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcc
Q 010051 306 ATLNSLYIYDTESVPPIAILA-GLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPL 384 (519)
Q Consensus 306 ~~d~~i~vwd~~~~~~~~~~~-~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (519)
+.++-|..|+..+++...... ......|.++...++|.+.+. +. +.|.+|+..++......... ........+.++
T Consensus 424 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~-~~~~~~~~i~~i 500 (781)
T 3v9f_A 424 TYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTS-NSQLLENFVRSI 500 (781)
T ss_dssp ETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTT-TSSCSCSCEEEE
T ss_pred eccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCc-ccccccceeEEE
Confidence 655678889987665332211 113467999999988875554 44 56888888766543222111 011113456777
Q ss_pred cccCCccEEEeecCCceeeecCC
Q 010051 385 VTKSEDMIIEASTNDKLVTAETK 407 (519)
Q Consensus 385 ~~s~~~~~l~~~~~d~~i~~~~~ 407 (519)
...++|.+.+....+++..++..
T Consensus 501 ~~d~~g~lWigt~~~Gl~~~~~~ 523 (781)
T 3v9f_A 501 AQDSEGRFWIGTFGGGVGIYTPD 523 (781)
T ss_dssp EECTTCCEEEEESSSCEEEECTT
T ss_pred EEcCCCCEEEEEcCCCEEEEeCC
Confidence 77888877666655666666544
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.57 E-value=9.9e-06 Score=81.99 Aligned_cols=113 Identities=13% Similarity=0.086 Sum_probs=72.1
Q ss_pred CEEEEEEe-cCCCEEEEEcC-C----CcEEEEEecCC-ccccccccccccccccccCcceeEEEEccCCCeEEEEEcccC
Q 010051 15 PVLTLDFH-PISGLLATGGA-D----YDIKIWLINSG-EKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTT 87 (519)
Q Consensus 15 ~V~~~~~s-p~~~~la~~~~-d----g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~ 87 (519)
.+...+|| |||++||.+.. + ..|+++|+.++ +.+..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~------------------------------------- 217 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD------------------------------------- 217 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------------------------------------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------------------------------------
Confidence 68889999 99998885432 2 24888888877 42100
Q ss_pred CCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCce--EEEec-ccccCeEEEEEcCCCCe
Q 010051 88 ETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD-----NSCIIWDVNKGSV--LQILD-AHFHYVQGVAWDPLSKY 159 (519)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~--~~~~~-~h~~~v~~~~~~~~~~~ 159 (519)
.+. .....++|+|||+.|+....+ ..|+++++.++.. ...+. .+......+.|+||+++
T Consensus 218 -------~~~------~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~ 284 (751)
T 2xe4_A 218 -------KVS------GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT 284 (751)
T ss_dssp -------CEE------EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE
T ss_pred -------ccc------CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE
Confidence 000 001246788888777766654 3688889877642 22222 22344678899999998
Q ss_pred EEEeeC---CCeEEEEecCCC
Q 010051 160 VASLSS---DRTCRIYANRPT 177 (519)
Q Consensus 160 l~~~~~---dg~i~iwd~~~~ 177 (519)
|+..+. ...|.++|+.++
T Consensus 285 l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 285 LCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEECSSCEEEEEEESSSC
T ss_pred EEEEecCCCCceEEEEECCCC
Confidence 876553 345777887664
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.57 E-value=2.4e-05 Score=65.54 Aligned_cols=191 Identities=14% Similarity=0.135 Sum_probs=115.0
Q ss_pred eeeeccccCC--CCeEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCceEEEecccccC-eEEEEEcCCCCeEE-EeeCCC
Q 010051 94 KVLKNLSFHR--KDVLDLQWSTDGAFLLSGSVD--NSCIIWDVNKGSVLQILDAHFHY-VQGVAWDPLSKYVA-SLSSDR 167 (519)
Q Consensus 94 ~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~-~~~~dg 167 (519)
+.+..+. |. .....+.|+. +.++.+.+.+ ..|+++|+.+++.+..+...... --.+++. ++.|+ ..-.++
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 4444442 43 3466899986 4455555554 48999999999998877543221 1334443 44444 445689
Q ss_pred eEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeec
Q 010051 168 TCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSE 247 (519)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~ 247 (519)
.+.+||..+.+........ . ....+.+++..|+++.++
T Consensus 86 ~v~v~D~~tl~~~~ti~~~--------------------------------~--~Gwglt~dg~~L~vSdgs-------- 123 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYP--------------------------------G--EGWALTSDDSHLYMSDGT-------- 123 (243)
T ss_dssp EEEEEETTTTEEEEEEECS--------------------------------S--CCCEEEECSSCEEEECSS--------
T ss_pred EEEEEECCcCcEEEEEeCC--------------------------------C--CceEEeeCCCEEEEECCC--------
Confidence 9999999886532211110 0 123444678888776655
Q ss_pred ccceEEEEeccCCCcccccCC--CCC---CCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCce
Q 010051 248 SINSAYIFSRKDLSRPALQLP--GAS---KPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPI 322 (519)
Q Consensus 248 ~~~~i~i~~~~~~~~~~~~~~--~~~---~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 322 (519)
+.++++|..+... ...+. .+. ..++.+.|. +| ...+..-.++.|.+.|..+++.+
T Consensus 124 --~~l~~iDp~t~~~-~~~I~V~~~g~~~~~lNeLe~~-~G----------------~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 124 --AVIRKLDPDTLQQ-VGSIKVTAGGRPLDNLNELEWV-NG----------------ELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp --SEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TT----------------EEEEEETTTTEEEEECTTTCBEE
T ss_pred --CeEEEEeCCCCeE-EEEEEEccCCcccccceeeEEe-CC----------------EEEEEECCCCeEEEEECCCCCEE
Confidence 6888888765432 11111 111 234445544 33 33333445789999999999998
Q ss_pred EEEecc------------ccccEEEEEEcCCCCEEEEEeC
Q 010051 323 AILAGL------------HYAAITDIAWSNNARYLALSSQ 350 (519)
Q Consensus 323 ~~~~~~------------~~~~i~~~~~s~~g~~l~~~~~ 350 (519)
..+... .....+.|+|+|+++.|++.+.
T Consensus 184 ~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 184 AWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 887631 1135688999998777666654
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.55 E-value=8.4e-05 Score=72.33 Aligned_cols=80 Identities=10% Similarity=0.050 Sum_probs=52.8
Q ss_pred cCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccc
Q 010051 307 TLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVT 386 (519)
Q Consensus 307 ~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (519)
..|.|..||+.+++.+-.... ..+...-.+...+.+++.++.||.|+.||..+++......+... .....+.+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g-----~~~~P~~y 523 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG-----AIGYPMTY 523 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEE
T ss_pred CcCeEEEEECCCCCEEeEecC--CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC-----cEeccEEE
Confidence 358999999999998877653 22222212233567788899999999999999976555544322 22344666
Q ss_pred cCCccEE
Q 010051 387 KSEDMII 393 (519)
Q Consensus 387 s~~~~~l 393 (519)
..+|+..
T Consensus 524 ~~~G~qy 530 (599)
T 1w6s_A 524 THKGTQY 530 (599)
T ss_dssp EETTEEE
T ss_pred EeCCEEE
Confidence 6777543
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.52 E-value=0.00011 Score=71.48 Aligned_cols=80 Identities=10% Similarity=0.013 Sum_probs=53.3
Q ss_pred CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCccccc
Q 010051 308 LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTK 387 (519)
Q Consensus 308 d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 387 (519)
+|.|..||+.+++.+-.... ..++..-.....+.+++.++.||.++.||.++++....+.+... ..-..+.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g-----~~a~P~~y~ 537 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE--HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG-----IVSPPITWE 537 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE--SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEEE
T ss_pred cceEEEEECCCCCEEEEecC--CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC-----cccCceEEE
Confidence 58899999999998877654 22222222223466888899999999999999976655554321 122346666
Q ss_pred CCccEEE
Q 010051 388 SEDMIIE 394 (519)
Q Consensus 388 ~~~~~l~ 394 (519)
.+|+..+
T Consensus 538 ~~G~qYv 544 (582)
T 1flg_A 538 QDGEQYL 544 (582)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 7776443
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.51 E-value=2.7e-05 Score=70.11 Aligned_cols=210 Identities=7% Similarity=-0.003 Sum_probs=117.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc--------------------cccCeEEEEEcCCCCeEEEe
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA--------------------HFHYVQGVAWDPLSKYVASL 163 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------h~~~v~~~~~~~~~~~l~~~ 163 (519)
....+++|.++|++++++..++.|..|+..++... .+.. ....+..+++.++...|+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34567889999988888888999999998765433 2210 11357889999733345555
Q ss_pred eCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEecCCc-c
Q 010051 164 SSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGSY-K 241 (519)
Q Consensus 164 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~-~ 241 (519)
...+.|..+|..++........ . ..........+++.+ +|...++..... .
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~---------~------------------~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~ 150 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATS---------V------------------DGVPFKWLYAVTVDQRTGIVYFTDVSTLYD 150 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESE---------E------------------TTEECSCEEEEEECTTTCCEEEEESCSSCC
T ss_pred ECCCCEEEEeCCCCEEEEeccc---------C------------------CCCcccccceEEEecCCCEEEEECCccccc
Confidence 5555588888664321100000 0 000012356799999 897666643310 0
Q ss_pred ee------eeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEe
Q 010051 242 IS------SMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYD 315 (519)
Q Consensus 242 ~~------~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd 315 (519)
.. ......+.++.|+...... ..+.......+.++|+|++..+ +++-...+.|.+|+
T Consensus 151 ~~~~~~~~~~~~~~g~v~~~d~~~~~~--~~~~~~~~~p~gia~~~dg~~l---------------yv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 151 DRGVQQIMDTSDKTGRLIKYDPSTKET--TLLLKELHVPGGAEVSADSSFV---------------LVAEFLSHQIVKYW 213 (322)
T ss_dssp TTCHHHHHHHTCCCEEEEEEETTTTEE--EEEEEEESCCCEEEECTTSSEE---------------EEEEGGGTEEEEEE
T ss_pred ccccceehcccCCCceEEEEeCCCCEE--EEeccCCccCcceEECCCCCEE---------------EEEeCCCCeEEEEE
Confidence 00 0001124677777643221 1111111234568899887432 33434567899999
Q ss_pred CCCCC--ceEEEeccccccEEEEEEcCCCCEEEEEeC----------CCcEEEEEec
Q 010051 316 TESVP--PIAILAGLHYAAITDIAWSNNARYLALSSQ----------DGYCTLVEFE 360 (519)
Q Consensus 316 ~~~~~--~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~----------dg~i~vwd~~ 360 (519)
+.... ....+.. ..+ ...++++++|+++++... .+.|..++-.
T Consensus 214 ~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 214 LEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp SSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 87532 1222222 223 788999999987766544 3556666643
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=7.8e-05 Score=69.82 Aligned_cols=115 Identities=10% Similarity=0.102 Sum_probs=66.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC-C----eEEEEEcCCCceE--EEecccccCeEEEEEcC-CCCeEEEeeCCCeEEEEec
Q 010051 103 RKDVLDLQWSTDGAFLLSGSVD-N----SCIIWDVNKGSVL--QILDAHFHYVQGVAWDP-LSKYVASLSSDRTCRIYAN 174 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~d-g----~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~ 174 (519)
......++|+++|++|+.+... + .+.+++. .+... ..+.. ......++++| ++.++++-...+.|..++.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 3457888999988866666541 1 3443443 33221 22222 23456788999 6665666556788999998
Q ss_pred CCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEE
Q 010051 175 RPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYI 254 (519)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i 254 (519)
....... +... ........++|+|+|++|+++.... +.|+.
T Consensus 256 ~~~~~~~-----------------------------~~~~-~~~~~P~gia~~pdG~~lyv~d~~~---------~~I~~ 296 (430)
T 3tc9_A 256 TTQETTP-----------------------------LFTI-QDSGWEFHIQFHPSGNYAYIVVVNQ---------HYILR 296 (430)
T ss_dssp TTTEEEE-----------------------------EEEC-SSSSCCEEEEECTTSSEEEEEETTT---------TEEEE
T ss_pred CCCcEEE-----------------------------EEEc-CCCCcceeEEEcCCCCEEEEEECCC---------CEEEE
Confidence 7543100 0000 0112356899999999766654332 57777
Q ss_pred Eecc
Q 010051 255 FSRK 258 (519)
Q Consensus 255 ~~~~ 258 (519)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7654
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.46 E-value=0.00015 Score=67.89 Aligned_cols=200 Identities=11% Similarity=0.076 Sum_probs=102.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCce-EEEecccccCeEEEEEcC-CCCeEEEeeCCCeEEEEecC
Q 010051 103 RKDVLDLQWSTDGAFLLSGSVDN-----SCIIWDVNKGSV-LQILDAHFHYVQGVAWDP-LSKYVASLSSDRTCRIYANR 175 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~ 175 (519)
......++|+++|+ |+.+...+ .+...+...+.. ...+. .......++++| ++.++++-..++.|+.++..
T Consensus 181 ~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 181 IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 34577888888888 44443311 233333322211 01111 123446788899 56655555567889999887
Q ss_pred CCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEE
Q 010051 176 PTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIF 255 (519)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~ 255 (519)
++.... ..+ .... ......++|+|+|++|+++.... +.|+.+
T Consensus 259 ~g~~~~---------~~~-------------------~~~~-~~~~~~ia~dpdG~~LYvad~~~---------~~I~~~ 300 (433)
T 4hw6_A 259 TGTLTE---------EEV-------------------MMDT-KGSNFHIVWHPTGDWAYIIYNGK---------HCIYRV 300 (433)
T ss_dssp TCCEEE---------EEE-------------------ECSC-CSSCEEEEECTTSSEEEEEETTT---------TEEEEE
T ss_pred CCeEEE---------EEe-------------------ccCC-CCCcccEEEeCCCCEEEEEeCCC---------CEEEEE
Confidence 543200 000 0000 11123699999999666654332 567776
Q ss_pred eccCCCccc---ccCC---C------------CCCCeEEEEE---------cCCcccccccCCCCcccccceEEEEEecC
Q 010051 256 SRKDLSRPA---LQLP---G------------ASKPVVAVRF---------CPLAFNLRESNSAGFFKLPYRLIFAIATL 308 (519)
Q Consensus 256 ~~~~~~~~~---~~~~---~------------~~~~v~~~~~---------sp~~~~l~~~~~~g~~~~~~~~~~~~~~d 308 (519)
+.......+ ..+. + .-.....+++ .++| +++++-...
T Consensus 301 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g----------------~lyvaD~~n 364 (433)
T 4hw6_A 301 DYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY----------------DFYFCDRDS 364 (433)
T ss_dssp EBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE----------------EEEEEETTT
T ss_pred eCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC----------------cEEEEECCC
Confidence 654211110 0000 0 0112445666 3333 445555556
Q ss_pred CeEEEEeCCCCCceEEEeccc-----------------cccEEEEEEc-CCCCEEEEEeCCCcEEEEEec
Q 010051 309 NSLYIYDTESVPPIAILAGLH-----------------YAAITDIAWS-NNARYLALSSQDGYCTLVEFE 360 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~~~~~~-----------------~~~i~~~~~s-~~g~~l~~~~~dg~i~vwd~~ 360 (519)
+.|+.++. ++. +.++.+.. -.....|+++ ++|.++++=.....|+.++++
T Consensus 365 ~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 365 HTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 78888885 443 33333200 1236788998 566666655566778887764
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.42 E-value=0.00051 Score=58.39 Aligned_cols=214 Identities=12% Similarity=0.068 Sum_probs=128.5
Q ss_pred eccccCCCCeEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCceEEEecc-cccCeEEEEEcCCCCeEEEeeCCCeEEEEec
Q 010051 97 KNLSFHRKDVLDLQWSTDGAFLLS-GSVDNSCIIWDVNKGSVLQILDA-HFHYVQGVAWDPLSKYVASLSSDRTCRIYAN 174 (519)
Q Consensus 97 ~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 174 (519)
+.+.+-...+..++|+|++..|++ ...++.|...|.. ++.++.+.- -....-.|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 345566678999999998776665 6668899999987 887777632 2256788999988877676656788999988
Q ss_pred CCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEE
Q 010051 175 RPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYI 254 (519)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i 254 (519)
........ ...... . +........+..++|+|.+..|+++.... ...++.
T Consensus 99 ~~~~~i~~-------~~~~~~--------------~-~~~~~~N~g~EGLA~d~~~~~L~va~E~~--------p~~i~~ 148 (255)
T 3qqz_A 99 TPNSEVKI-------LKKIKI--------------P-LQESPTNCGFEGLAYSRQDHTFWFFKEKN--------PIEVYK 148 (255)
T ss_dssp CTTCCEEE-------EEEEEC--------------C-CSSCCCSSCCEEEEEETTTTEEEEEEESS--------SEEEEE
T ss_pred CCCCeeee-------eeeecc--------------c-cccccccCCcceEEEeCCCCEEEEEECcC--------CceEEE
Confidence 66432000 000000 0 00012234467999999998887765442 124455
Q ss_pred EeccCCCcccccC-------CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 255 FSRKDLSRPALQL-------PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 255 ~~~~~~~~~~~~~-------~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
|+-......+..+ ..+...+..++|+|... ++++.......|.++|.. ++.+..+.-
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg---------------~lliLS~~s~~L~~~d~~-g~~~~~~~L 212 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN---------------TLLVLSHESRALQEVTLV-GEVIGEMSL 212 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT---------------EEEEEETTTTEEEEECTT-CCEEEEEEC
T ss_pred EcccccCCceeeecchhhccccccCCceeEEEcCCCC---------------eEEEEECCCCeEEEEcCC-CCEEEEEEc
Confidence 5410000001100 11233567888888643 445566666788888866 555554433
Q ss_pred c---cc-----ccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010051 328 L---HY-----AAITDIAWSNNARYLALSSQDGYCTLVE 358 (519)
Q Consensus 328 ~---~~-----~~i~~~~~s~~g~~l~~~~~dg~i~vwd 358 (519)
. |. ..--.|+|.++|+++++ +.-..++++.
T Consensus 213 ~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 213 TKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp STTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 1 11 24578999999985555 6666555553
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.40 E-value=6.3e-05 Score=73.24 Aligned_cols=152 Identities=10% Similarity=-0.005 Sum_probs=87.1
Q ss_pred CCEEEEEcCCCcEEEEEecCCccccccccccccc--ccc----ccCcceeEEEEccC------CCeEEEEEcccCCCccc
Q 010051 25 SGLLATGGADYDIKIWLINSGEKQKKIPTASYQN--SLS----YHGSAINILRFSPC------GGELIIWKLHTTETGQA 92 (519)
Q Consensus 25 ~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~----~~~~~v~~~~~~~~------~~~i~vw~~~~~~~~~~ 92 (519)
+..|++++.|+.|..+|..+|+.+.+........ .+. ...+.| .+... ++.|..+|..+++..-.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v---~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTV---LMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEE---EEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEE---EEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 5577788889999999999998876654322100 000 112222 22222 57888888887732211
Q ss_pred ceeeecc--------------------------------ccCCCCeEEEEEcCCCCEEEEEeCC----------------
Q 010051 93 WKVLKNL--------------------------------SFHRKDVLDLQWSTDGAFLLSGSVD---------------- 124 (519)
Q Consensus 93 ~~~~~~~--------------------------------~~~~~~v~~~~~s~~~~~l~~~~~d---------------- 124 (519)
+...... .+.......+++.++...++.+..+
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 1110000 0000001235666766677766532
Q ss_pred CeEEEEEcCCCceEEEecc--cc--------cCeEEEEEcCCCC---eEEEeeCCCeEEEEecCCCCcc
Q 010051 125 NSCIIWDVNKGSVLQILDA--HF--------HYVQGVAWDPLSK---YVASLSSDRTCRIYANRPTKSK 180 (519)
Q Consensus 125 g~i~vwd~~~~~~~~~~~~--h~--------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~ 180 (519)
+.|..+|..+|+.+..++. |. .++. +....+|+ .++.++.+|.+.++|..+++..
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 3699999999998876643 21 1221 22224664 5677888999999999988754
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.36 E-value=0.00022 Score=69.37 Aligned_cols=158 Identities=11% Similarity=0.039 Sum_probs=91.0
Q ss_pred EEEecCCCE----EEEEcCCCcEEEEEecCCccccccccccccc--ccc----ccCcceeEEEEcc------CCCeEEEE
Q 010051 19 LDFHPISGL----LATGGADYDIKIWLINSGEKQKKIPTASYQN--SLS----YHGSAINILRFSP------CGGELIIW 82 (519)
Q Consensus 19 ~~~sp~~~~----la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~----~~~~~v~~~~~~~------~~~~i~vw 82 (519)
++++|.+.. |++++.|+.|.-+|..+|+.+-+........ .+. ...+. |.+.. .++.|+-+
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~---V~vg~~g~e~g~~g~v~A~ 187 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDK---VIIGSSGAELGVRGYLTAY 187 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTE---EEECCBCGGGTCCCEEEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCE---EEEEecccccCCCCeEEEE
Confidence 445444444 7888889999999999998876543321100 000 01121 22222 25788888
Q ss_pred EcccCCCcccceeeecc-------------------------------ccCCCCe-EEEEEcCCCCEEEEEeCC------
Q 010051 83 KLHTTETGQAWKVLKNL-------------------------------SFHRKDV-LDLQWSTDGAFLLSGSVD------ 124 (519)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-------------------------------~~~~~~v-~~~~~s~~~~~l~~~~~d------ 124 (519)
|..+++..-.+...... ..-...+ ..+++.++..+++.+..+
T Consensus 188 D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~ 267 (599)
T 1w6s_A 188 DVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNE 267 (599)
T ss_dssp ETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCG
T ss_pred ECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccC
Confidence 88777321111110000 0000011 135666777778877655
Q ss_pred ----------CeEEEEEcCCCceEEEeccccc----------CeEEEEEc-CCC---CeEEEeeCCCeEEEEecCCCCcc
Q 010051 125 ----------NSCIIWDVNKGSVLQILDAHFH----------YVQGVAWD-PLS---KYVASLSSDRTCRIYANRPTKSK 180 (519)
Q Consensus 125 ----------g~i~vwd~~~~~~~~~~~~h~~----------~v~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~ 180 (519)
+.|..+|..+|+.+..++.... ++. +... .+| ..++.++.+|.+.++|..+++..
T Consensus 268 ~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 268 TMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp GGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 3899999999998876654221 121 2222 467 46777889999999999998754
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.34 E-value=0.00057 Score=63.00 Aligned_cols=208 Identities=8% Similarity=-0.069 Sum_probs=123.4
Q ss_pred CCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeE-EEeeCCCeEEEEecCCCCcc
Q 010051 103 RKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYV-ASLSSDRTCRIYANRPTKSK 180 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~ 180 (519)
...+..++|.+.+..|+.. ...+.|+.+++..+.....+.........+++.+.+..| ++-...+.|.+.++......
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 4458899999866666544 457889999987665444333333345678888755555 44455677888877643211
Q ss_pred ccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCC
Q 010051 181 GVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDL 260 (519)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~ 260 (519)
.. . . ........++++|.+.+|+.+.... .+.|+.+++...
T Consensus 195 ~l-----------------------------~-~-~~l~~P~giavdp~~g~ly~td~~~--------~~~I~r~~~dG~ 235 (386)
T 3v65_B 195 VL-----------------------------L-W-QSLEKPRAIALHPMEGTIYWTDWGN--------TPRIEASSMDGS 235 (386)
T ss_dssp EE-----------------------------E-C-SSCSCEEEEEEETTTTEEEEEECSS--------SCEEEEEETTSC
T ss_pred Ee-----------------------------e-c-CCCCCCcEEEEEcCCCeEEEeccCC--------CCEEEEEeCCCC
Confidence 00 0 0 0113356899999877777654321 146777777543
Q ss_pred CcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcC
Q 010051 261 SRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSN 340 (519)
Q Consensus 261 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~ 340 (519)
... ..........+.++|+|++.. ++++-...+.|..+++........+.. .......|++ .
T Consensus 236 ~~~-~~~~~~~~~PnGlavd~~~~~---------------lY~aD~~~~~I~~~d~dG~~~~~~~~~-~~~~P~giav-~ 297 (386)
T 3v65_B 236 GRR-IIADTHLFWPNGLTIDYAGRR---------------MYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITV-F 297 (386)
T ss_dssp SCE-EEECSSCSCEEEEEEEGGGTE---------------EEEEETTTTEEEEECTTSCSCEEEECS-SCSSEEEEEE-E
T ss_pred CcE-EEEECCCCCeeeEEEeCCCCE---------------EEEEECCCCEEEEEeCCCCeeEEEEEC-CCCCceEEEE-E
Confidence 221 222223345788999987643 234444557899999875444434433 3445677888 3
Q ss_pred CCCEEEEEeCCCcEEEEEecCCcccce
Q 010051 341 NARYLALSSQDGYCTLVEFENDELGIP 367 (519)
Q Consensus 341 ~g~~l~~~~~dg~i~vwd~~~~~~~~~ 367 (519)
.+.++++-...+.|..++..+++....
T Consensus 298 ~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 298 EDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 455556655667888887555544333
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.34 E-value=0.0012 Score=59.98 Aligned_cols=240 Identities=11% Similarity=-0.018 Sum_probs=127.7
Q ss_pred CEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCC-----
Q 010051 15 PVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTET----- 89 (519)
Q Consensus 15 ~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~----- 89 (519)
..+|.+..++ .+|+.+.. ..|+..++....... +......+..++|.+.++.|++-|.....-
T Consensus 35 ~~~C~~~~~~-~~ll~~~~-~~I~~i~~~g~~~~~----------~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~ 102 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFANR-IDIRQVLPHRSEYTL----------LLNNLENAIALDFHHRRELVFWSDVTLDRILRANL 102 (349)
T ss_dssp SSCEEESSSC-CEEEEECB-SCEEEECTTSCCEEE----------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCcccccccC-ceeEeecc-cceEEEeCCCCeeEE----------eecCCCceEEEEEeccccEEEEEeccCCceEEEec
Confidence 3455555553 34444433 447777765443221 111233467888888777766655543210
Q ss_pred -cccceeeeccccCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEee-CC
Q 010051 90 -GQAWKVLKNLSFHRKDVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLS-SD 166 (519)
Q Consensus 90 -~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d 166 (519)
+. .....+.........+++.+.+..|+ +-...+.|.+.++........+...-.....++++|.+..|+... ..
T Consensus 103 ~g~--~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~ 180 (349)
T 3v64_C 103 NGS--NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN 180 (349)
T ss_dssp TSC--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS
T ss_pred CCC--CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC
Confidence 00 00011111223456788887555554 445567899999865443333333335678999998766665544 33
Q ss_pred -CeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeee
Q 010051 167 -RTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSM 245 (519)
Q Consensus 167 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~ 245 (519)
+.|..+++.......... ..-.....++++|++..|+.+....
T Consensus 181 ~~~I~r~~~dG~~~~~~~~-------------------------------~~~~~PnGla~d~~~~~lY~aD~~~----- 224 (349)
T 3v64_C 181 TPRIEASSMDGSGRRIIAD-------------------------------THLFWPNGLTIDYAGRRMYWVDAKH----- 224 (349)
T ss_dssp SCEEEEEETTSCSCEESCC-------------------------------SSCSCEEEEEEETTTTEEEEEETTT-----
T ss_pred CCEEEEEeCCCCCcEEEEE-------------------------------CCCCCcceEEEeCCCCEEEEEECCC-----
Confidence 678877776532111000 0113356899999888777764332
Q ss_pred ecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEE
Q 010051 246 SESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAIL 325 (519)
Q Consensus 246 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 325 (519)
+.|..+++...... ..+.........+++.. + ..+++-...+.|..++..+++....+
T Consensus 225 ----~~I~~~~~dG~~~~-~~~~~~~~~P~giav~~-~----------------~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 225 ----HVIERANLDGSHRK-AVISQGLPHPFAITVFE-D----------------SLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp ----TEEEEEETTSCSCE-EEECSSCSSEEEEEEET-T----------------EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ----CEEEEEeCCCCceE-EEEeCCCCCceEEEEEC-C----------------EEEEecCCCCeEEEEEccCCCccEEe
Confidence 57888887543221 11222223344555522 1 33444445567777776566655555
Q ss_pred e
Q 010051 326 A 326 (519)
Q Consensus 326 ~ 326 (519)
.
T Consensus 283 ~ 283 (349)
T 3v64_C 283 R 283 (349)
T ss_dssp E
T ss_pred c
Confidence 4
No 272
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.00071 Score=63.48 Aligned_cols=71 Identities=11% Similarity=0.146 Sum_probs=43.2
Q ss_pred CCeEEEEE-------cCCCCEEEEEeCCC-------eEEEEEcCC-CceE-----EEecccccCeEEEEEcCCCCe-EEE
Q 010051 104 KDVLDLQW-------STDGAFLLSGSVDN-------SCIIWDVNK-GSVL-----QILDAHFHYVQGVAWDPLSKY-VAS 162 (519)
Q Consensus 104 ~~v~~~~~-------s~~~~~l~~~~~dg-------~i~vwd~~~-~~~~-----~~~~~h~~~v~~~~~~~~~~~-l~~ 162 (519)
.....|+| +++|++|+++...+ .|.+++... +... ..+... .....++++|++.. +++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 35788888 88888676665543 266665443 2221 222221 23357788995444 555
Q ss_pred eeCCCeEEEEecC
Q 010051 163 LSSDRTCRIYANR 175 (519)
Q Consensus 163 ~~~dg~i~iwd~~ 175 (519)
-..++.|..+|+.
T Consensus 265 d~~~g~V~r~d~~ 277 (496)
T 3kya_A 265 SYEKGQVFRLDLV 277 (496)
T ss_dssp ETTTTEEEEECHH
T ss_pred ECCCCEEEEEecc
Confidence 6667889999987
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.32 E-value=0.00079 Score=62.03 Aligned_cols=238 Identities=11% Similarity=-0.027 Sum_probs=127.2
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCC------Ccc
Q 010051 18 TLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTE------TGQ 91 (519)
Q Consensus 18 ~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~------~~~ 91 (519)
|.+..+ ..+|+.+.. ..|+.+++........ ......+..++|.+.++.|++-|..... .+.
T Consensus 81 C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~----------~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 81 CKALGP-EPVLLFANR-IDIRQVLPHRSEYTLL----------LNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp EEECSS-CCEEEEECB-SCEEEECTTSCCCEEE----------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ECCccc-cceeEeecC-ccceeeccCCCcEEEE----------ecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 444444 334544443 4577777765443221 1123346788888877666655543320 000
Q ss_pred cceeeeccccCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC-C-Ce
Q 010051 92 AWKVLKNLSFHRKDVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS-D-RT 168 (519)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d-g~ 168 (519)
.....+.........+++.+.+..|+ +-...+.|.+.++........+...-.....++++|.+..|+.... . +.
T Consensus 149 --~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~ 226 (386)
T 3v65_B 149 --NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR 226 (386)
T ss_dssp --CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred --CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCE
Confidence 01111111223456788887555554 4445678999888654433333333356789999987776655543 3 67
Q ss_pred EEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecc
Q 010051 169 CRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSES 248 (519)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~ 248 (519)
|..+++........ .. ..-.....++|+|++..|+.+....
T Consensus 227 I~r~~~dG~~~~~~-----------------------------~~--~~~~~PnGlavd~~~~~lY~aD~~~-------- 267 (386)
T 3v65_B 227 IEASSMDGSGRRII-----------------------------AD--THLFWPNGLTIDYAGRRMYWVDAKH-------- 267 (386)
T ss_dssp EEEEETTSCSCEEE-----------------------------EC--SSCSCEEEEEEEGGGTEEEEEETTT--------
T ss_pred EEEEeCCCCCcEEE-----------------------------EE--CCCCCeeeEEEeCCCCEEEEEECCC--------
Confidence 77777765321100 00 0112356899999888777764332
Q ss_pred cceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 249 INSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 249 ~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
+.|+.+++..... ...+.........+++..+ ..+++-...+.|..++..+++.+..+..
T Consensus 268 -~~I~~~d~dG~~~-~~~~~~~~~~P~giav~~~-----------------~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 268 -HVIERANLDGSHR-KAVISQGLPHPFAITVFED-----------------SLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp -TEEEEECTTSCSC-EEEECSSCSSEEEEEEETT-----------------EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred -CEEEEEeCCCCee-EEEEECCCCCceEEEEECC-----------------EEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 5788888754322 1122222233445555221 3344545567788888666666655543
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.31 E-value=0.0019 Score=58.56 Aligned_cols=205 Identities=8% Similarity=-0.059 Sum_probs=122.9
Q ss_pred CCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeE-EEeeCCCeEEEEecCCCCcc
Q 010051 103 RKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYV-ASLSSDRTCRIYANRPTKSK 180 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~ 180 (519)
...+..++|++.+..|+.. ...+.|..+++..+.....+.........+++.+.+..| ++-...+.|.+.++......
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 3458899999866666655 457889999987765444343333455788998755544 55555678999888654211
Q ss_pred ccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCC
Q 010051 181 GVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDL 260 (519)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~ 260 (519)
.. . . ........++++|.+..|+.+.... .+.|+.+++...
T Consensus 152 ~l-----------------------------~-~-~~l~~P~~iavdp~~g~ly~td~~~--------~~~I~r~~~dG~ 192 (349)
T 3v64_C 152 VL-----------------------------L-W-QSLEKPRAIALHPMEGTIYWTDWGN--------TPRIEASSMDGS 192 (349)
T ss_dssp EE-----------------------------E-C-TTCSCEEEEEEETTTTEEEEEECSS--------SCEEEEEETTSC
T ss_pred EE-----------------------------E-e-CCCCCcceEEEecCcCeEEEeccCC--------CCEEEEEeCCCC
Confidence 00 0 0 0113356899999777776654321 156777777543
Q ss_pred CcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcC
Q 010051 261 SRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSN 340 (519)
Q Consensus 261 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~ 340 (519)
.. ...........+.++++|++.. +.++-...+.|..+++........+.. .......+++ .
T Consensus 193 ~~-~~~~~~~~~~PnGla~d~~~~~---------------lY~aD~~~~~I~~~~~dG~~~~~~~~~-~~~~P~giav-~ 254 (349)
T 3v64_C 193 GR-RIIADTHLFWPNGLTIDYAGRR---------------MYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITV-F 254 (349)
T ss_dssp SC-EESCCSSCSCEEEEEEETTTTE---------------EEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEE-E
T ss_pred Cc-EEEEECCCCCcceEEEeCCCCE---------------EEEEECCCCEEEEEeCCCCceEEEEeC-CCCCceEEEE-E
Confidence 22 1222223445788999987643 234444557899999875444333333 3445677777 3
Q ss_pred CCCEEEEEeCCCcEEEEEecCCcc
Q 010051 341 NARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 341 ~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
.+.++++-...+.|..++..+++.
T Consensus 255 ~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 255 EDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCEEEEecCCCCeEEEEEccCCCc
Confidence 455555555667788877545543
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.30 E-value=0.00049 Score=67.06 Aligned_cols=73 Identities=12% Similarity=0.107 Sum_probs=50.8
Q ss_pred EEEEcCCCCEEEEEeC--------------------C----CeEEEEEcCCCceEEEecc--cc--------cCeEEEEE
Q 010051 108 DLQWSTDGAFLLSGSV--------------------D----NSCIIWDVNKGSVLQILDA--HF--------HYVQGVAW 153 (519)
Q Consensus 108 ~~~~s~~~~~l~~~~~--------------------d----g~i~vwd~~~~~~~~~~~~--h~--------~~v~~~~~ 153 (519)
.+++.|+..+++.+.. | +.|..+|..+|+.+-.++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4567777777776653 2 5899999999998877643 32 1221 222
Q ss_pred c-CCCC---eEEEeeCCCeEEEEecCCCCccc
Q 010051 154 D-PLSK---YVASLSSDRTCRIYANRPTKSKG 181 (519)
Q Consensus 154 ~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~ 181 (519)
. .+|+ .++.++.+|.+.++|..+++...
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 360 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQN 360 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEec
Confidence 1 4664 67889999999999999987543
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.28 E-value=0.0013 Score=55.84 Aligned_cols=117 Identities=18% Similarity=0.222 Sum_probs=76.8
Q ss_pred CCCCCEEEEEEecCCCEE-EEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCC
Q 010051 11 HDTKPVLTLDFHPISGLL-ATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTET 89 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~l-a~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~ 89 (519)
+-.+.+..++|+|+++.| ++...++.|...|.. ++.++.++.
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l------------------------------------ 66 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL------------------------------------ 66 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC------------------------------------
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec------------------------------------
Confidence 445689999999987644 556677888888876 554332210
Q ss_pred cccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce---EEEec------ccccCeEEEEEcCCCCeE
Q 010051 90 GQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSV---LQILD------AHFHYVQGVAWDPLSKYV 160 (519)
Q Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~------~h~~~v~~~~~~~~~~~l 160 (519)
. -....-.|++.+++.++++.-.++.+.++++..... +.... ........++|+|.++.|
T Consensus 67 ----------~-g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L 135 (255)
T 3qqz_A 67 ----------D-FVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTF 135 (255)
T ss_dssp ----------S-SCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEE
T ss_pred ----------C-CCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEE
Confidence 1 124567778888887666655677888888765432 12221 233456899999999888
Q ss_pred EEeeCCCeEEEEecC
Q 010051 161 ASLSSDRTCRIYANR 175 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~ 175 (519)
+++.+.....+|.+.
T Consensus 136 ~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 136 WFFKEKNPIEVYKVN 150 (255)
T ss_dssp EEEEESSSEEEEEEE
T ss_pred EEEECcCCceEEEEc
Confidence 887776666666654
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.26 E-value=0.0021 Score=57.36 Aligned_cols=230 Identities=8% Similarity=-0.007 Sum_probs=122.3
Q ss_pred EEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEE----------cccCCCcccceee
Q 010051 27 LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWK----------LHTTETGQAWKVL 96 (519)
Q Consensus 27 ~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~----------~~~~~~~~~~~~~ 96 (519)
+|+.+.. ..|+..|+.+.+....++ ....+..++|.+.++.|++-| +.....+. ...
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~----------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~--~~~ 69 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP----------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS--SYD 69 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC----------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------CE
T ss_pred EEEEECC-CeEEEEECCCcceEehhc----------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc--ccE
Confidence 4454443 458888887665332211 223456777777665555444 33210000 001
Q ss_pred eccccCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCC--CeEEEEe
Q 010051 97 KNLSFHRKDVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSD--RTCRIYA 173 (519)
Q Consensus 97 ~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd 173 (519)
..+.........+++.+.+..|+ +-...+.|.+.++........+.........++++|.+..|+.+... +.|..++
T Consensus 70 ~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 70 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEc
Confidence 11111223457889887555555 44567899999986544333333333567899999877766555442 6777777
Q ss_pred cCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEE
Q 010051 174 NRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAY 253 (519)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~ 253 (519)
+....... + . . ..-.....++++|++..|+.+.... +.|.
T Consensus 150 ~dG~~~~~-----------~------------------~-~-~~~~~P~gla~d~~~~~lY~~D~~~---------~~I~ 189 (316)
T 1ijq_A 150 LNGVDIYS-----------L------------------V-T-ENIQWPNGITLDLLSGRLYWVDSKL---------HSIS 189 (316)
T ss_dssp TTSCCEEE-----------E------------------E-C-SSCSCEEEEEEETTTTEEEEEETTT---------TEEE
T ss_pred CCCCCeEE-----------E------------------E-E-CCCCCceEEEEeccCCEEEEEECCC---------CeEE
Confidence 65432100 0 0 0 0113456899999888877764432 5788
Q ss_pred EEeccCCCcccc-cCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEe
Q 010051 254 IFSRKDLSRPAL-QLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILA 326 (519)
Q Consensus 254 i~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~ 326 (519)
.++......... ...........+++.. + ..+++-...+.|..++..+++.+..+.
T Consensus 190 ~~d~dg~~~~~~~~~~~~~~~P~giav~~-~----------------~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 190 SIDVNGGNRKTILEDEKRLAHPFSLAVFE-D----------------KVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEETTSCSCEEEEECTTTTSSEEEEEEET-T----------------EEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEecCCCceEEEeecCCccCCcEEEEEEC-C----------------EEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 888753222111 1111122334555532 2 334455556788888877776655554
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.24 E-value=4e-05 Score=76.41 Aligned_cols=243 Identities=13% Similarity=0.114 Sum_probs=127.7
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------eEEEEEcCCCceE--EEec-ccccCeEEEEEcCCCCeEEEeeC-CCeEEE
Q 010051 108 DLQWST-DGAFLLSGSVDN-----------SCIIWDVNKGSVL--QILD-AHFHYVQGVAWDPLSKYVASLSS-DRTCRI 171 (519)
Q Consensus 108 ~~~~s~-~~~~l~~~~~dg-----------~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~~~~~-dg~i~i 171 (519)
.+++.+ +++.++.|+.+. .+.+||+.+++.. ..+. .+.....++++..++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556677 888888887543 6889999887642 2221 23333445677889999999884 457999
Q ss_pred EecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecC-Ccceeeeecccc
Q 010051 172 YANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAG-SYKISSMSESIN 250 (519)
Q Consensus 172 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~-~~~~~~~~~~~~ 250 (519)
||..+.+......++ ....-.+++..++|+.+++++. +.. ....
T Consensus 270 yd~~t~~W~~~~~~~------------------------------~~R~~~s~~~~~dg~iyv~GG~~~~~-----~~~~ 314 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQ------------------------------VARGYQSSATMSDGRVFTIGGSWSGG-----VFEK 314 (656)
T ss_dssp EEGGGTEEEECCCCS------------------------------SCCSSCEEEECTTSCEEEECCCCCSS-----SCCC
T ss_pred ecCcCCceeECCCCC------------------------------ccccccceEEecCCeEEEEeCcccCC-----cccc
Confidence 998765422111110 0111124666678998888773 211 1235
Q ss_pred eEEEEeccCCCcccc------cCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEE
Q 010051 251 SAYIFSRKDLSRPAL------QLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAI 324 (519)
Q Consensus 251 ~i~i~~~~~~~~~~~------~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 324 (519)
.+.+||.....-... .+..... ...+..++..++.+..+| . ++.......+..||..+......
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~~---~~~~~~~~~iyv~Gg~~g------~-~~~~~~~~~v~~yd~~~~~w~~~ 384 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTADK---QGLYRSDNHAWLFGWKKG------S-VFQAGPSTAMNWYYTSGSGDVKS 384 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCCT---TGGGTTTCSCCEEECGGG------C-EEECCSSSEEEEEECSTTCEEEE
T ss_pred cceEeCCCCCcceeCCCccccccccccc---cceeecCCceEEEECCCC------c-EEEecCccceeeeecCCcceeec
Confidence 788888754321100 0000000 011222333333333332 1 22222345788899887764433
Q ss_pred Eeccccc---------cEEEEEEc-CCCCEEEEEeCCC-----------cEEEEEecCCcccceeeecCCcccccCCCCc
Q 010051 325 LAGLHYA---------AITDIAWS-NNARYLALSSQDG-----------YCTLVEFENDELGIPISLSGNKVSKDENKSP 383 (519)
Q Consensus 325 ~~~~~~~---------~i~~~~~s-~~g~~l~~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (519)
... +.. .-.++.|. .++++++.|+.++ .|.+||..+...... .............
T Consensus 385 ~~~-~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~---~~~~mp~~R~~~~ 460 (656)
T 1k3i_A 385 AGK-RQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVF---ASNGLYFARTFHT 460 (656)
T ss_dssp EEE-CEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEE---CTTCCSSCCBSCE
T ss_pred CCc-cccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEE---ccCCCCCCcccCC
Confidence 322 211 22444554 3778888887543 566777665433211 1001111122334
Q ss_pred ccccCCccEEEeecCC
Q 010051 384 LVTKSEDMIIEASTND 399 (519)
Q Consensus 384 ~~~s~~~~~l~~~~~d 399 (519)
.+..++++++++++.+
T Consensus 461 ~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQR 476 (656)
T ss_dssp EEECTTSCEEEECCBS
T ss_pred eEECCCCCEEEECCcc
Confidence 4667899999988854
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.22 E-value=0.0034 Score=58.05 Aligned_cols=168 Identities=7% Similarity=-0.046 Sum_probs=97.1
Q ss_pred CCCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC--CCeEEEEecCCCCc
Q 010051 103 RKDVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS--DRTCRIYANRPTKS 179 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~ 179 (519)
......+++.+.+..|+ +-...+.|.+.++........+...-.....|+++|.+.+|+.... .+.|...++.....
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 34567888887544444 4455788999998665444444434455789999997666665542 36787777765321
Q ss_pred cccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccC
Q 010051 180 KGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKD 259 (519)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~ 259 (519)
... .. ..-.....|+++|++..|+.+.... +.|..+++..
T Consensus 238 ~~~-----------------------------~~--~~l~~P~glavd~~~~~lY~aD~~~---------~~I~~~d~dG 277 (400)
T 3p5b_L 238 YSL-----------------------------VT--ENIQWPNGITLDLLSGRLYWVDSKL---------HSISSIDVNG 277 (400)
T ss_dssp EEE-----------------------------EC--SSCSCEEEEEEETTTTEEEEEETTT---------TEEEEEETTS
T ss_pred EEE-----------------------------EE--CCCCceEEEEEEeCCCEEEEEECCC---------CEEEEEeCCC
Confidence 110 00 0113456899999888887764332 5788888754
Q ss_pred CCccccc-CCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 260 LSRPALQ-LPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 260 ~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
....... ..........+++..+ ..+++-...+.|..+|..+++.+..+..
T Consensus 278 ~~~~~~~~~~~~l~~P~gl~v~~~-----------------~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 278 GNRKTILEDEKRLAHPFSLAVFED-----------------KVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp CCCEEEEECSSTTSSEEEEEEETT-----------------EEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred CccEEEEeCCCCCCCCEEEEEeCC-----------------EEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 3221111 1111223334444222 3344445557788888777776666654
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.15 E-value=0.0037 Score=55.74 Aligned_cols=225 Identities=12% Similarity=0.003 Sum_probs=126.8
Q ss_pred CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCC----CceEEEecccccCeEEE
Q 010051 77 GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNK----GSVLQILDAHFHYVQGV 151 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~ 151 (519)
..|+..++.... ....+ .....+..++|++.+..|+.+ ...+.|..+++.. ......+...-.....+
T Consensus 10 ~~I~~i~~~~~~------~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 10 HEVRKMTLDRSE------YTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp SSEEEEETTSCC------CEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred CeEEEEECCCcc------eEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 456777776542 11112 234568899999876666655 4568999999876 22222233222455788
Q ss_pred EEcCCCCeE-EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCC
Q 010051 152 AWDPLSKYV-ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDG 230 (519)
Q Consensus 152 ~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 230 (519)
++.+.+..| ++-...+.|.++++....... + .. ........++++|.+
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~-----------~------------------~~--~~~~~P~~iavdp~~ 131 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKT-----------L------------------FR--ENGSKPRAIVVDPVH 131 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEE-----------E------------------EE--CTTCCEEEEEEETTT
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEE-----------E------------------EE--CCCCCcceEEeCCCC
Confidence 988755544 454567889999876532110 0 00 011245689999977
Q ss_pred CeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCe
Q 010051 231 SFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNS 310 (519)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~ 310 (519)
.+|+.+.... .+.|+.+++....... .....-...+.++++|++.. ++++-...+.
T Consensus 132 g~ly~~d~~~--------~~~I~~~~~dG~~~~~-~~~~~~~~P~gla~d~~~~~---------------lY~~D~~~~~ 187 (316)
T 1ijq_A 132 GFMYWTDWGT--------PAKIKKGGLNGVDIYS-LVTENIQWPNGITLDLLSGR---------------LYWVDSKLHS 187 (316)
T ss_dssp TEEEEEECSS--------SCEEEEEETTSCCEEE-EECSSCSCEEEEEEETTTTE---------------EEEEETTTTE
T ss_pred CEEEEEccCC--------CCeEEEEcCCCCCeEE-EEECCCCCceEEEEeccCCE---------------EEEEECCCCe
Confidence 7666654221 1467777764322211 11223346778999987643 2344445578
Q ss_pred EEEEeCCCCCceEEEec-cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 311 LYIYDTESVPPIAILAG-LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 311 i~vwd~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
|..+|+........... ........+++. .+.++++-...+.|..++..+++.
T Consensus 188 I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 99999875433222221 012345677774 355555555667888888765543
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.00061 Score=63.74 Aligned_cols=156 Identities=10% Similarity=0.136 Sum_probs=90.4
Q ss_pred CCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCC-C----eEEEEecCCC
Q 010051 104 KDVLDLQWST-DGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSD-R----TCRIYANRPT 177 (519)
Q Consensus 104 ~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~~~ 177 (519)
.....|+++| ++..|+.+...+.|+.+|+..+....... .......++|++++++|+++... + .+.+++.. +
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g 214 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-S 214 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-G
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-C
Confidence 3567899998 46667777666889999997766544333 44567899999999966665542 1 23333322 1
Q ss_pred CccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEecCCcceeeeecccceEEEEe
Q 010051 178 KSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISSMSESINSAYIFS 256 (519)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~~ 256 (519)
..... .. +.. ......++++| +|..+++-... +.|+.++
T Consensus 215 ~~~~~--------~~-------------------l~~---~~~p~giavdp~~g~lyv~d~~~----------~~V~~~~ 254 (430)
T 3tc9_A 215 GFKVI--------TE-------------------LTK---GQNCNGAETHPINGELYFNSWNA----------GQVFRYD 254 (430)
T ss_dssp TSCSE--------EE-------------------EEE---CSSCCCEEECTTTCCEEEEETTT----------TEEEEEE
T ss_pred ceeee--------ee-------------------ecc---CCCceEEEEeCCCCEEEEEECCC----------CEEEEEE
Confidence 11000 00 000 12245788999 56555543333 5788888
Q ss_pred ccCCCc-ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC
Q 010051 257 RKDLSR-PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE 317 (519)
Q Consensus 257 ~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~ 317 (519)
...... .+.... .......++|+|+|.+| +++-...+.|+.++..
T Consensus 255 ~~~~~~~~~~~~~-~~~~P~gia~~pdG~~l---------------yv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 255 FTTQETTPLFTIQ-DSGWEFHIQFHPSGNYA---------------YIVVVNQHYILRSDYD 300 (430)
T ss_dssp TTTTEEEEEEECS-SSSCCEEEEECTTSSEE---------------EEEETTTTEEEEEEEE
T ss_pred CCCCcEEEEEEcC-CCCcceeEEEcCCCCEE---------------EEEECCCCEEEEEeCC
Confidence 754322 111121 22346789999998532 3444455678887654
No 282
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.13 E-value=0.0047 Score=56.01 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=21.7
Q ss_pred CCCCEEEEEEecCCCEEEEEcCCCcEEEEE
Q 010051 12 DTKPVLTLDFHPISGLLATGGADYDIKIWL 41 (519)
Q Consensus 12 h~~~V~~~~~sp~~~~la~~~~dg~i~iwd 41 (519)
.-..-..|+|.|+|+++++ ...|.|++++
T Consensus 29 ~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp CCSCEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred CCCCceEEEEcCCCeEEEE-eCCCeEEEEE
Confidence 3455779999999986655 4568888887
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.11 E-value=0.0034 Score=55.91 Aligned_cols=165 Identities=10% Similarity=-0.015 Sum_probs=95.4
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC--CCeEEEEecCCCCccc
Q 010051 105 DVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS--DRTCRIYANRPTKSKG 181 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~ 181 (519)
....+++.+.+..|+ +-...+.|.++++........+.........+++.|.+..|+.+.. .+.|...++.......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 456788887555444 4455678999998654333333334456789999987666665542 4677777776432110
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
. .. ..-.....++++|++..|+.+.... +.|+.+++....
T Consensus 160 ~-----------------------------~~--~~l~~Pnglavd~~~~~lY~aD~~~---------~~I~~~d~dG~~ 199 (318)
T 3sov_A 160 I-----------------------------IN--SEIYWPNGLTLDYEEQKLYWADAKL---------NFIHKSNLDGTN 199 (318)
T ss_dssp E-----------------------------EC--SSCSCEEEEEEETTTTEEEEEETTT---------TEEEEEETTSCS
T ss_pred E-----------------------------EE--CCCCCccEEEEeccCCEEEEEECCC---------CEEEEEcCCCCc
Confidence 0 00 0012356899999888777764332 578888875422
Q ss_pred cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 262 RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 262 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
.. ....+.......+++..+ ..+++-...+.|..++..+++....+..
T Consensus 200 ~~-~~~~~~~~~P~glav~~~-----------------~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 200 RQ-AVVKGSLPHPFALTLFED-----------------ILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp CE-EEECSCCSCEEEEEEETT-----------------EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred eE-EEecCCCCCceEEEEeCC-----------------EEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 21 112222333445555332 3344444567888888877776655543
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.09 E-value=0.0063 Score=56.24 Aligned_cols=229 Identities=12% Similarity=-0.007 Sum_probs=131.3
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCC----ceEEEecccccCeEE
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKG----SVLQILDAHFHYVQG 150 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~----~~~~~~~~h~~~v~~ 150 (519)
...|+..++..... ..+......+..|+|++.+..|+.+. ..+.|+.+++... .....+.........
T Consensus 91 ~~~I~~i~l~~~~~-------~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 91 RHEVRKMTLDRSEY-------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp TTEEEEECTTSCSC-------EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred cceeEEEccCCcce-------eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 46777777764421 11122456789999998766666554 5678999998652 233333334456788
Q ss_pred EEEcCCCC-eEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 151 VAWDPLSK-YVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 151 ~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
+++.+.+. ++++-...+.|.+.++........ .. ........++++|.
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l-----------------------------~~--~~~~~P~~iavdp~ 212 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL-----------------------------FR--ENGSKPRAIVVDPV 212 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEE-----------------------------EE--CSSCCEEEEEEETT
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEE-----------------------------Ee--CCCCCcceEEEecc
Confidence 99987444 445555678888888875431110 00 01123568999997
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN 309 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~ 309 (519)
+.+|+.+... ..+.|+..++..... .......-...+.++++|++..| +++-...+
T Consensus 213 ~g~ly~td~~--------~~~~I~~~~~dG~~~-~~~~~~~l~~P~glavd~~~~~l---------------Y~aD~~~~ 268 (400)
T 3p5b_L 213 HGFMYWTDWG--------TPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRL---------------YWVDSKLH 268 (400)
T ss_dssp TTEEEEEECS--------SSCCEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEE---------------EEEETTTT
T ss_pred cCeEEEEeCC--------CCCEEEEEeCCCCcc-EEEEECCCCceEEEEEEeCCCEE---------------EEEECCCC
Confidence 7777665421 114677777754322 22222333567889999876432 33334457
Q ss_pred eEEEEeCCCCCceEEEec-cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccce
Q 010051 310 SLYIYDTESVPPIAILAG-LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIP 367 (519)
Q Consensus 310 ~i~vwd~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~ 367 (519)
.|..+|+........+.. ........+++. .+.++++-...+.|..++..+++....
T Consensus 269 ~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 269 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNL 326 (400)
T ss_dssp EEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEE
T ss_pred EEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEE
Confidence 899999875444333332 012345567762 344555555668888888666644333
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.04 E-value=0.0064 Score=54.50 Aligned_cols=275 Identities=13% Similarity=0.125 Sum_probs=139.1
Q ss_pred CCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEE-----cc
Q 010051 11 HDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWK-----LH 85 (519)
Q Consensus 11 ~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~-----~~ 85 (519)
.....+.+|.|.+++..+|+| ..|.| +.....|+.-..+.. ........+..|.|.+ +.+.+-- +.
T Consensus 33 ~~~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~-----~~~~~~~~~~~i~~~~--~~~~~~g~~g~i~~ 103 (327)
T 2xbg_A 33 PTTATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTL-----VLDHSDYRFNSVSFQG--NEGWIVGEPPIMLH 103 (327)
T ss_dssp SCSSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCC-----CCSCCCCEEEEEEEET--TEEEEEEETTEEEE
T ss_pred CCCCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCC-----CCCCCCccEEEEEecC--CeEEEEECCCeEEE
Confidence 445689999998888888865 46654 333333432111110 0011234567777765 2332211 01
Q ss_pred cCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce-EEEecccccCeEEEEEcCCCCeEEEee
Q 010051 86 TTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSV-LQILDAHFHYVQGVAWDPLSKYVASLS 164 (519)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~ 164 (519)
+...+..|+.+.....+...+..+.+.+++..++.+ .++.|+. ....|+. ......+...+..+.+.+++.+++++.
T Consensus 104 S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~ 181 (327)
T 2xbg_A 104 TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS 181 (327)
T ss_dssp ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET
T ss_pred ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC
Confidence 222355666654433334557888887777655554 4565432 2223432 222234456788999999887776654
Q ss_pred CCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceee
Q 010051 165 SDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISS 244 (519)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~ 244 (519)
..+..+-+|-....... . .......+..+.+.+++..++++..
T Consensus 182 ~G~~~~S~d~gG~tW~~------------------------------~-~~~~~~~~~~~~~~~~g~~~~~~~~------ 224 (327)
T 2xbg_A 182 RGSFYSTWEPGQTAWEP------------------------------H-NRTTSRRLHNMGFTPDGRLWMIVNG------ 224 (327)
T ss_dssp TSSEEEEECTTCSSCEE------------------------------E-ECCSSSCEEEEEECTTSCEEEEETT------
T ss_pred CCcEEEEeCCCCCceeE------------------------------C-CCCCCCccceeEECCCCCEEEEeCC------
Confidence 33333333321111000 0 0011244667888999887766532
Q ss_pred eecccceEEEEecc---CCCcccccC-CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCC
Q 010051 245 MSESINSAYIFSRK---DLSRPALQL-PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVP 320 (519)
Q Consensus 245 ~~~~~~~i~i~~~~---~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~ 320 (519)
+.+++.... +... +..- ......+..+.+.+++. +++++.++.| ++....++
T Consensus 225 -----G~~~~s~~D~G~tW~~-~~~~~~~~~~~~~~v~~~~~~~-----------------~~~~g~~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 225 -----GKIAFSDPDNSENWGE-LLSPLRRNSVGFLDLAYRTPNE-----------------VWLAGGAGAL-LCSQDGGQ 280 (327)
T ss_dssp -----TEEEEEETTEEEEECC-CBCTTSSCCSCEEEEEESSSSC-----------------EEEEESTTCE-EEESSTTS
T ss_pred -----ceEEEecCCCCCeeEe-ccCCcccCCcceEEEEecCCCE-----------------EEEEeCCCeE-EEeCCCCc
Confidence 234443211 1111 1100 01223578888887653 3334445656 34445454
Q ss_pred ceEEEecc--ccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010051 321 PIAILAGL--HYAAITDIAWSNNARYLALSSQDGYCTLVE 358 (519)
Q Consensus 321 ~~~~~~~~--~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd 358 (519)
.-..+... ....+.++.|.+++. +++++.+|.|.-++
T Consensus 281 tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 281 TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 44444320 235678888876555 55666788766554
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.99 E-value=0.0088 Score=60.23 Aligned_cols=116 Identities=7% Similarity=-0.087 Sum_probs=72.3
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC--CCeEEEEecCCCCcc
Q 010051 104 KDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS--DRTCRIYANRPTKSK 180 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~ 180 (519)
.....|++.+.++.|+.+ ...+.|.+.++........+...-.....|+++|.+.+|+.... .+.|...++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 456678888877655544 45789999998655443333334456789999998666665543 267887777654311
Q ss_pred ccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccC
Q 010051 181 GVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKD 259 (519)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~ 259 (519)
.+ + . ..-.....|++++.+..|+.+.... ..|..+++..
T Consensus 551 ~l-----------------------------v-~-~~l~~P~GLavD~~~~~LYwaD~~~---------~~I~~~d~dG 589 (791)
T 3m0c_C 551 SL-----------------------------V-T-ENIQWPNGITLDLLSGRLYWVDSKL---------HSISSIDVNG 589 (791)
T ss_dssp EE-----------------------------E-C-SSCSCEEEEEEETTTTEEEEEETTT---------TEEEEEETTS
T ss_pred EE-----------------------------E-e-CCCCCceEEEEecCCCeEEEEeCCC---------CcEEEEecCC
Confidence 00 0 0 0113466899998887777764332 5777777754
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.97 E-value=0.0057 Score=54.47 Aligned_cols=230 Identities=11% Similarity=-0.019 Sum_probs=129.4
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCce-EEEecccccCeEEEEE
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKGSV-LQILDAHFHYVQGVAW 153 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~ 153 (519)
...|+.+++........ ..+. ....+..++|.+.+..|+.+ ...+.|..+++..+.. ...+...-.....+++
T Consensus 12 ~~~I~~i~l~~~~~~~~-~~~~----~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glav 86 (318)
T 3sov_A 12 RRDLRLVDATNGKENAT-IVVG----GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 86 (318)
T ss_dssp EEEEEEEETTCTTSCCE-EEEE----EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEE
T ss_pred cCeEEEEECCCCceEEE-EEec----CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEE
Confidence 45677777765421100 1111 12346789999865555544 4578899999876532 1222222234567888
Q ss_pred cCCCCeE-EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCe
Q 010051 154 DPLSKYV-ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSF 232 (519)
Q Consensus 154 ~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~ 232 (519)
.+.+..| ++-...+.|.++++......... . ........+++.|.+.+
T Consensus 87 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~------------------------------~-~~~~~P~giavdp~~g~ 135 (318)
T 3sov_A 87 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLF------------------------------W-QELDQPRAIALDPSSGF 135 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEE------------------------------C-SSCSSEEEEEEEGGGTE
T ss_pred EcCCCeEEEEECCCCEEEEEECCCCcEEEEE------------------------------e-CCCCCccEEEEeCCCCE
Confidence 8755444 55555778999988754211100 0 11133568999997766
Q ss_pred EEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 233 LLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
|+.+... ..+.|+.+++...... ......-...+.++++|++.. +.++-...+.|.
T Consensus 136 ly~td~~--------~~~~I~r~~~dG~~~~-~~~~~~l~~Pnglavd~~~~~---------------lY~aD~~~~~I~ 191 (318)
T 3sov_A 136 MYWTDWG--------EVPKIERAGMDGSSRF-IIINSEIYWPNGLTLDYEEQK---------------LYWADAKLNFIH 191 (318)
T ss_dssp EEEEECS--------SSCEEEEEETTSCSCE-EEECSSCSCEEEEEEETTTTE---------------EEEEETTTTEEE
T ss_pred EEEEecC--------CCCEEEEEEcCCCCeE-EEEECCCCCccEEEEeccCCE---------------EEEEECCCCEEE
Confidence 6665421 1256777776532221 112222345688999986643 234444567899
Q ss_pred EEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcccce
Q 010051 313 IYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIP 367 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~ 367 (519)
.+|+........+.. .......+++. .+.++.+-...+.|..++..+++....
T Consensus 192 ~~d~dG~~~~~~~~~-~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 192 KSNLDGTNRQAVVKG-SLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp EEETTSCSCEEEECS-CCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEcCCCCceEEEecC-CCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEE
Confidence 999875443333332 33455677775 334555555668888888866654333
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.97 E-value=0.003 Score=59.10 Aligned_cols=197 Identities=7% Similarity=-0.000 Sum_probs=109.1
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCC----e-EEEEecCC
Q 010051 104 KDVLDLQWSTD--GAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDR----T-CRIYANRP 176 (519)
Q Consensus 104 ~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg----~-i~iwd~~~ 176 (519)
.....++|+|+ +..|+.+...+.|+.+|+.++...... ........++|+++++ |+.+...+ . +...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34678999984 455666655589999999887765443 3445688999999999 54444322 1 22222211
Q ss_pred CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEcc-CCCeEEEecCCcceeeeecccceEEEE
Q 010051 177 TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSP-DGSFLLVPAGSYKISSMSESINSAYIF 255 (519)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~~~~~~~~~~~~~~~~~i~i~ 255 (519)
.. .. .. ... .......++++| +|..+++-... +.|+.+
T Consensus 217 ~~-~~--------~~-------------------~~~---~~~~P~giavd~~~G~lyv~d~~~----------~~V~~~ 255 (433)
T 4hw6_A 217 GF-TE--------RL-------------------SLC---NARGAKTCAVHPQNGKIYYTRYHH----------AMISSY 255 (433)
T ss_dssp TT-CC--------EE-------------------EEE---ECSSBCCCEECTTTCCEEECBTTC----------SEEEEE
T ss_pred Ce-ec--------cc-------------------ccc---ccCCCCEEEEeCCCCeEEEEECCC----------CEEEEE
Confidence 10 00 00 000 012345788999 55544443333 467777
Q ss_pred eccCCCc--ccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC--CCCc--eEEEecc-
Q 010051 256 SRKDLSR--PALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE--SVPP--IAILAGL- 328 (519)
Q Consensus 256 ~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~--~~~~--~~~~~~~- 328 (519)
+...... .+... +....-..++|+|++..| +++-...+.|+.++.. ++.. ...+.+.
T Consensus 256 d~~~g~~~~~~~~~-~~~~~~~~ia~dpdG~~L---------------Yvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~ 319 (433)
T 4hw6_A 256 DPATGTLTEEEVMM-DTKGSNFHIVWHPTGDWA---------------YIIYNGKHCIYRVDYNRETGKLAVPYIVCGQH 319 (433)
T ss_dssp CTTTCCEEEEEEEC-SCCSSCEEEEECTTSSEE---------------EEEETTTTEEEEEEBCTTTCCBCCCEEEEECT
T ss_pred ECCCCeEEEEEecc-CCCCCcccEEEeCCCCEE---------------EEEeCCCCEEEEEeCCCCCcccCcEEEEEecC
Confidence 7653221 11111 112233469999998432 3444455788887765 2321 1222220
Q ss_pred -------------ccccEEEEEE---------cCCCCEEEEEeCCCcEEEEEe
Q 010051 329 -------------HYAAITDIAW---------SNNARYLALSSQDGYCTLVEF 359 (519)
Q Consensus 329 -------------~~~~i~~~~~---------s~~g~~l~~~~~dg~i~vwd~ 359 (519)
.-.....+++ .++|.++++-...+.|+.++.
T Consensus 320 g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 320 SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 0123567899 777777777666778888874
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.96 E-value=0.002 Score=56.49 Aligned_cols=217 Identities=12% Similarity=0.081 Sum_probs=118.1
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEE-ecc----cc--cCeEEEEE---cCCCCeEEEeeC------
Q 010051 103 RKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQI-LDA----HF--HYVQGVAW---DPLSKYVASLSS------ 165 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~-~~~----h~--~~v~~~~~---~~~~~~l~~~~~------ 165 (519)
..-..+++|.+....|+.++ ..++|..||...+..... +.. .. ..+..|.| .|+++++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33445789988666666666 689999999976643332 222 11 13578999 688777665431
Q ss_pred -------CCeEEEEecC---CCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEE
Q 010051 166 -------DRTCRIYANR---PTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLV 235 (519)
Q Consensus 166 -------dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~ 235 (519)
+..|..||+. +++......+...... .... ..........++..++|+..++
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~-----------------~~~~-~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE-----------------FEKK-AGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH-----------------HHHH-HSSCCEEEEEEEECTTSCEEEE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCcccccc-----------------cccc-ccccccCCceeEECCCCCEEEe
Confidence 5779999998 5543322211100000 0000 0001134668999999998887
Q ss_pred ecCC-cceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEE
Q 010051 236 PAGS-YKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIY 314 (519)
Q Consensus 236 ~~~~-~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vw 314 (519)
.+.. ..+..+......+..|.+.... .......+.|+++|+|.. |++....+.|..+
T Consensus 154 ~s~~~~~I~rV~pdG~~~~~~~~~~~~------~~~~~G~nGIv~~pdg~~----------------Liv~~~~g~L~~f 211 (334)
T 2p9w_A 154 FALGMPAIARVSADGKTVSTFAWESGN------GGQRPGYSGITFDPHSNK----------------LIAFGGPRALTAF 211 (334)
T ss_dssp EEESSCEEEEECTTSCCEEEEEECCCC------SSSCCSCSEEEEETTTTE----------------EEEESSSSSEEEE
T ss_pred CCCCCCeEEEEeCCCCEEeeeeecCCC------cccccCcceEEEeCCCCE----------------EEEEcCCCeEEEE
Confidence 6655 5555554444445555443210 112234678999999854 4444447899999
Q ss_pred eCCCCCc--eEEEe-cc--ccccEEEE-EEcCCCCE-EEEEeCCCcEEEEEe
Q 010051 315 DTESVPP--IAILA-GL--HYAAITDI-AWSNNARY-LALSSQDGYCTLVEF 359 (519)
Q Consensus 315 d~~~~~~--~~~~~-~~--~~~~i~~~-~~s~~g~~-l~~~~~dg~i~vwd~ 359 (519)
|+..... +..-. +. .......| .--.+|+. |++.+..+.+.+.+-
T Consensus 212 D~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 212 DVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp ECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred cCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence 9885332 21110 10 01123332 33357777 444444554444443
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.89 E-value=0.0049 Score=54.57 Aligned_cols=199 Identities=13% Similarity=0.163 Sum_probs=112.1
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCC----CCe--E--EEeeC--CCeEEEEecCC--CCcccc
Q 010051 115 GAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPL----SKY--V--ASLSS--DRTCRIYANRP--TKSKGV 182 (519)
Q Consensus 115 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~----~~~--l--~~~~~--dg~i~iwd~~~--~~~~~~ 182 (519)
..+++.....+-+.+||+ +|+.++.+.. +.+..+..-|+ ++. + ++.-. +++|.+|++.. ......
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 445666667788999999 8988888754 45666666553 222 3 33333 57899997743 221100
Q ss_pred ccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEE--ccC-CC-eEEEecCCcceeeeecccceEEEEecc
Q 010051 183 EKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAW--SPD-GS-FLLVPAGSYKISSMSESINSAYIFSRK 258 (519)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--sp~-g~-~l~~~~~~~~~~~~~~~~~~i~i~~~~ 258 (519)
.... ..+ ..-...++.+++ +|. ++ ++++...+ +.+..|.+.
T Consensus 117 ~~~~----------------------~pv---~t~~~~pyGlcly~~~~~g~~yafV~~k~----------G~~~q~~l~ 161 (355)
T 3amr_A 117 TDPD----------------------HPI---ATAINEVYGFTLYHSQKTGKYYAMVTGKE----------GEFEQYELK 161 (355)
T ss_dssp SCTT----------------------SCE---ECCCSSCCCEEEEECTTTCCEEEEEECSS----------SEEEEEEEE
T ss_pred cccc----------------------cCc---CCCCCCeeEEEEEecCCCCcEEEEEECCC----------CeEEEEEEE
Confidence 0000 000 000133556777 674 44 45544443 566666663
Q ss_pred CCC------cccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCC-----CCCceEEEec
Q 010051 259 DLS------RPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTE-----SVPPIAILAG 327 (519)
Q Consensus 259 ~~~------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~-----~~~~~~~~~~ 327 (519)
... +.+..+.- ...+..|...+.. ..|+.+-.+.-|..|+.. +++.+..+..
T Consensus 162 ~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~----------------g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~ 224 (355)
T 3amr_A 162 ADKNGYISGKKVRAFKM-NSQTEGMAADDEY----------------GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG 224 (355)
T ss_dssp ECTTSCEEEEEEEEEEC-SSCEEEEEEETTT----------------TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS
T ss_pred eCCCCcccceEEEEecC-CCCcceEEEcCCC----------------CeEEEecccceEEEEeCCcCCCCCceEEEEecC
Confidence 211 22222222 2456677777655 567888888778888865 2344544432
Q ss_pred ccc-ccEEEEEE--cCCCC-EEEEEe-CCCcEEEEEec-CCccccee
Q 010051 328 LHY-AAITDIAW--SNNAR-YLALSS-QDGYCTLVEFE-NDELGIPI 368 (519)
Q Consensus 328 ~~~-~~i~~~~~--s~~g~-~l~~~~-~dg~i~vwd~~-~~~~~~~~ 368 (519)
.+- ..+..|++ .++++ ||++++ .+.++.|||.. +.+....+
T Consensus 225 g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 225 RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 122 36888887 56665 666666 56799999996 44433333
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.84 E-value=0.0053 Score=54.33 Aligned_cols=149 Identities=10% Similarity=0.186 Sum_probs=89.6
Q ss_pred CCCEEEEEcCCCcEEEEEecCCcccccccccccc-----ccccccCcce-eEEEEccC--CCeEEEEEcccCCCccccee
Q 010051 24 ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQ-----NSLSYHGSAI-NILRFSPC--GGELIIWKLHTTETGQAWKV 95 (519)
Q Consensus 24 ~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~v-~~~~~~~~--~~~i~vw~~~~~~~~~~~~~ 95 (519)
...+++.....+-+.|||+ +|+.+..++....- ..+.-....+ ..++-... .++|.+|++..... .+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~--~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG--TLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC--CEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC--ceee
Confidence 3456666666778999999 78877766432110 0011011111 12333344 68999998842211 1122
Q ss_pred eecc--c--cCCCCeEEEEE--cCC-CC-EEEEEeCCCeEEEEEcC-------CCceEEEecccccCeEEEEEcCCCCeE
Q 010051 96 LKNL--S--FHRKDVLDLQW--STD-GA-FLLSGSVDNSCIIWDVN-------KGSVLQILDAHFHYVQGVAWDPLSKYV 160 (519)
Q Consensus 96 ~~~~--~--~~~~~v~~~~~--s~~-~~-~l~~~~~dg~i~vwd~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~l 160 (519)
+..+ . .....+..+|+ +|. ++ ++++...+|.+..|++. +.+.++.+... +.+..+...+....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeE
Confidence 2111 1 11155666777 774 44 67788889999999983 23456666543 578889999988999
Q ss_pred EEeeCCCeEEEEecCC
Q 010051 161 ASLSSDRTCRIYANRP 176 (519)
Q Consensus 161 ~~~~~dg~i~iwd~~~ 176 (519)
+.+-++.-|..++.+.
T Consensus 195 yv~eEd~GIw~~da~p 210 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEP 210 (355)
T ss_dssp EEEETTTEEEEEECST
T ss_pred EEecccceEEEEeCCc
Confidence 9999987666666543
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.81 E-value=0.01 Score=53.80 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=46.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--EEEec---ccccCeEEEEEcCC---CCeEEEeeC-C-----Ce
Q 010051 103 RKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSV--LQILD---AHFHYVQGVAWDPL---SKYVASLSS-D-----RT 168 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~---~h~~~v~~~~~~~~---~~~l~~~~~-d-----g~ 168 (519)
-.....++|.|+|+++ .+..+|.|++++ +++. +..+. ........|+|+|+ +..|+.+.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3457899999999854 456679999998 4442 11111 12356789999998 555554433 2 56
Q ss_pred EEEEecCC
Q 010051 169 CRIYANRP 176 (519)
Q Consensus 169 i~iwd~~~ 176 (519)
|..|+...
T Consensus 107 v~r~~~~~ 114 (352)
T 2ism_A 107 VVRLRHLG 114 (352)
T ss_dssp EEEEEECS
T ss_pred EEEEEeCC
Confidence 77777653
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.78 E-value=0.021 Score=51.75 Aligned_cols=50 Identities=12% Similarity=0.070 Sum_probs=32.1
Q ss_pred eEEEEEecCCeEEEEeCCCC-Cce--EEEeccccccEEEEEEcCCCCEEEEEe
Q 010051 300 RLIFAIATLNSLYIYDTESV-PPI--AILAGLHYAAITDIAWSNNARYLALSS 349 (519)
Q Consensus 300 ~~~~~~~~d~~i~vwd~~~~-~~~--~~~~~~~~~~i~~~~~s~~g~~l~~~~ 349 (519)
.++++....+.|...++... ... ..+.......+.++++.|||.++++..
T Consensus 278 ~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 278 WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 55666666778888888753 322 222211245789999999998766654
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.77 E-value=0.00022 Score=71.23 Aligned_cols=165 Identities=7% Similarity=-0.035 Sum_probs=87.9
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC--CCeEEEEecCCCCccc
Q 010051 105 DVLDLQWSTDGAFLL-SGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS--DRTCRIYANRPTKSKG 181 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~ 181 (519)
....|++.+.+..|+ +-...+.|.++++........+.........|+++|.+.+|+.+.. .+.|..+++.......
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 345678876544444 4445688999998655443333332345578889987666655443 2566666654322110
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
+ .. ..-.....|+|+|++..|+++.... +.|..+++....
T Consensus 534 l-----------------------------~~--~~l~~PnGlavd~~~~~LY~aD~~~---------~~I~~~d~dG~~ 573 (699)
T 1n7d_A 534 L-----------------------------VT--ENIQWPNGITLDLLSGRLYWVDSKL---------HSISSIDVNGGN 573 (699)
T ss_dssp E-----------------------------SC--SSCSSCCCEEECTTTCCEEEEETTT---------TEEEEECSSSSC
T ss_pred E-----------------------------Ee--CCCCCccEEEEeccCCEEEEEecCC---------CeEEEEccCCCc
Confidence 0 00 0012345799999877777654332 578888875322
Q ss_pred cccccCC--CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec
Q 010051 262 RPALQLP--GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG 327 (519)
Q Consensus 262 ~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 327 (519)
... .+. ........+++..+ .++++....+.|..++..+++.+..+..
T Consensus 574 ~~~-~~~~~~~~~~P~glavd~~-----------------~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 574 RKT-ILEDEKRLAHPFSLAVFED-----------------KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp CEE-ECCCSSSCSSCCCCEEETT-----------------EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred eEE-EEecCCcCCCceEeEEECC-----------------EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 211 111 11111122222221 3344445567888888777776665543
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.73 E-value=0.018 Score=57.99 Aligned_cols=207 Identities=12% Similarity=0.003 Sum_probs=116.8
Q ss_pred CCCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCC----ceEEEecccccCeEEEEEcCCCCeEE-EeeCCCeEEEEecC
Q 010051 102 HRKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKG----SVLQILDAHFHYVQGVAWDPLSKYVA-SLSSDRTCRIYANR 175 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~ 175 (519)
....+..|+|.+....|+.. ...+.|+.+++... .....+.........|++.+.++.|+ +-...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 35567899999865555544 45678999998653 22333333345567899987775554 44557889999887
Q ss_pred CCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEE
Q 010051 176 PTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIF 255 (519)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~ 255 (519)
......+ +. ........|+++|.+.+|+.+... ....|...
T Consensus 502 G~~~~~l-----------------------------~~--~~l~~P~gIaVDp~~g~LYwtD~g--------~~~~I~~~ 542 (791)
T 3m0c_C 502 GVKRKTL-----------------------------FR--ENGSKPRAIVVDPVHGFMYWTDWG--------TPAKIKKG 542 (791)
T ss_dssp SSSEEEE-----------------------------EE--CTTCCEEEEEEETTTTEEEEEECS--------SSCEEEEE
T ss_pred CCeEEEE-----------------------------Ee--CCCCCcceEEEecCCCCEEEecCC--------CCCeEEEE
Confidence 5431110 00 011235689999987777665422 11467777
Q ss_pred eccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEec-cccccEE
Q 010051 256 SRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAG-LHYAAIT 334 (519)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~i~ 334 (519)
++..... ...+.......+.|++.+.+..| +++-...+.|..+++........+.. .......
T Consensus 543 ~~dG~~~-~~lv~~~l~~P~GLavD~~~~~L---------------YwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~ 606 (791)
T 3m0c_C 543 GLNGVDI-YSLVTENIQWPNGITLDLLSGRL---------------YWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 606 (791)
T ss_dssp ETTSCCE-EEEECSSCSCEEEEEEETTTTEE---------------EEEETTTTEEEEEETTSCSCEEEEECTTTTSSEE
T ss_pred ecCCCce-EEEEeCCCCCceEEEEecCCCeE---------------EEEeCCCCcEEEEecCCCceEEEecCCCccCCCC
Confidence 7653322 22222333567888888765332 33334457899999875544444432 0122345
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 335 DIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 335 ~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
.|++.. ++++++-...+.|...+..++..
T Consensus 607 glav~~-~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 607 SLAVFE-DKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EEEEET-TEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEeC-CEEEEEECCCCEEEEEeCCCCcc
Confidence 666632 23444444557777777655543
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.65 E-value=0.00045 Score=68.94 Aligned_cols=226 Identities=11% Similarity=0.004 Sum_probs=118.8
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCC----CceEEEecccccCeEE
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNK----GSVLQILDAHFHYVQG 150 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~----~~~~~~~~~h~~~v~~ 150 (519)
...|+..++... .....+. ....+..|+|.+.+..|+.+. ..+.|+.+++.. ......+.........
T Consensus 385 ~~~I~~id~~~~------~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 385 RHEVRKMTLDRS------EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 457 (699)
T ss_dssp TTC-CEECTTSC------CEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCC
T ss_pred ccceEEEeCCCC------cceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcce
Confidence 355666666543 1211121 234567889998777776654 457899999875 2222222222223456
Q ss_pred EEEcCCCCeE-EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC
Q 010051 151 VAWDPLSKYV-ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD 229 (519)
Q Consensus 151 ~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 229 (519)
|++.+.+..| ++-...+.|.++++.......+.. ........++++|.
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-------------------------------~~~~~P~giavDp~ 506 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------------------------------EQGSKPRAIVVDPV 506 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC-------------------------------CSSCCCCCEECCSS
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe-------------------------------CCCCCcceEEEccC
Confidence 7887544444 444556788888876542111000 00122457888887
Q ss_pred CCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC
Q 010051 230 GSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN 309 (519)
Q Consensus 230 g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~ 309 (519)
+.+|+.+... ..+.|+.+++....... .+.......+.|+|+|++..| +++-...+
T Consensus 507 ~g~ly~td~~--------~~~~I~~~~~dG~~~~~-l~~~~l~~PnGlavd~~~~~L---------------Y~aD~~~~ 562 (699)
T 1n7d_A 507 HGFMYWTDWG--------TPAKIKKGGLNGVDIYS-LVTENIQWPNGITLDLLSGRL---------------YWVDSKLH 562 (699)
T ss_dssp SSCCEECCCS--------SSCCEEBCCSSSCCCCE-ESCSSCSSCCCEEECTTTCCE---------------EEEETTTT
T ss_pred CCcEEEcccC--------CCCeEEEEeCCCCCeeE-EEeCCCCCccEEEEeccCCEE---------------EEEecCCC
Confidence 7766664421 11456666654322211 111223345678899876432 34444567
Q ss_pred eEEEEeCCCCCceEEEec-cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 310 SLYIYDTESVPPIAILAG-LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 310 ~i~vwd~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
.|.++++........+.. ........|++..+ .++++....+.|..++..+++.
T Consensus 563 ~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 563 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEE
T ss_pred eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCc
Confidence 899999875433332221 01123345555443 4444555567898888766543
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.06 Score=50.58 Aligned_cols=63 Identities=11% Similarity=0.127 Sum_probs=43.6
Q ss_pred CeEEEEEcC-CCCEEEEEeC-CCeEEEEEcCCCceEEEeccc---ccCeEEEEE-------cCCCCeEEEeeCCC
Q 010051 105 DVLDLQWST-DGAFLLSGSV-DNSCIIWDVNKGSVLQILDAH---FHYVQGVAW-------DPLSKYVASLSSDR 167 (519)
Q Consensus 105 ~v~~~~~s~-~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~~~~~dg 167 (519)
....|+|+| ++..|+.+.. .+.|++.|+.++.....+... ......++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 467899998 4555655544 467999998887765544332 235789999 99999776665543
No 298
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.53 E-value=0.037 Score=48.13 Aligned_cols=269 Identities=16% Similarity=0.160 Sum_probs=148.3
Q ss_pred CCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC
Q 010051 34 DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST 113 (519)
Q Consensus 34 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 113 (519)
+..|.|.|+..+....+.+...... +-.-...|.++.- +..|+|+|+++. +.++.+.- ...|.-=.|-.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~AdsA-IMnP~~~ViALra---g~~LQiFnletK------~klks~~~-~e~VvfWkWis 116 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISADSA-IMNPASKVIALKA---GKTLQIFNIEMK------SKMKAHTM-TDDVTFWKWIS 116 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCSEE-EECSSSSEEEEEE---TTEEEEEETTTT------EEEEEEEC-SSCEEEEEECS
T ss_pred CCEEEEEECCCCCCcccccccccee-eeCCCccEEEEec---CCeEEEechHHh------hhhcceec-CCccEEEEecC
Confidence 3478899998876554332221111 1111234555553 899999999877 45555443 35666667754
Q ss_pred CCCEEEEEeCCCeEEEEEcCC-CceEEEecccc----cCeEEEEEcCCCCeEEEeeC-------CCeEEEEecCCCCccc
Q 010051 114 DGAFLLSGSVDNSCIIWDVNK-GSVLQILDAHF----HYVQGVAWDPLSKYVASLSS-------DRTCRIYANRPTKSKG 181 (519)
Q Consensus 114 ~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~----~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~ 181 (519)
+ +.|+..+ +..|+-|++.. ..+.+.+..|. ..|.....+++.++++..+- .|.+.+|..+......
T Consensus 117 ~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ 194 (365)
T 2xzh_A 117 L-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 194 (365)
T ss_dssp S-SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE
T ss_pred C-CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce
Confidence 3 4555554 46799999975 35566665553 46777788899998765442 3678888877654221
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCC-----CeEEEecCCcceeeeecccceEEEEe
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDG-----SFLLVPAGSYKISSMSESINSAYIFS 256 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-----~~l~~~~~~~~~~~~~~~~~~i~i~~ 256 (519)
+.. |.... ..+-.+| ..++.+.. ....+.+++.+
T Consensus 195 ieG--------------------------------haa~F--~~~~~~g~~~~~~lf~fa~r-------~~~g~kLhIiE 233 (365)
T 2xzh_A 195 IEG--------------------------------HAASF--AQFKMEGNAEESTLFCFAVR-------GQAGGKLHIIE 233 (365)
T ss_dssp ECC--------------------------------SEEEE--EEECCTTCSSCEEEEEEEEE-------ETTEEEEEEEE
T ss_pred eee--------------------------------eeeee--EEEecCCCCCCceEEEEEEe-------cCCCcEEEEEE
Confidence 111 11111 1111111 11222111 01114777777
Q ss_pred ccCCCcccccCCCCCCCeEEEEEcCCccc--ccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEE
Q 010051 257 RKDLSRPALQLPGASKPVVAVRFCPLAFN--LRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAIT 334 (519)
Q Consensus 257 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~--l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~ 334 (519)
+...... -.........+-|.|+... -++. .+...+..++..+.-|.|++||+.++.++..-+- ....|.
T Consensus 234 i~~~~~~---~~~f~kk~vdi~fppea~~DFPVam----qvs~kygviyviTK~G~ihlyDleTgt~i~~nrI-S~d~iF 305 (365)
T 2xzh_A 234 VGTPPTG---NQPFPKKAVDVFFPPEAQNDFPVAM----QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIF 305 (365)
T ss_dssp CSSCCTT---CCCCCCEEEEECCCTTCTTCCEEEE----EEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEE
T ss_pred cCCCCCC---CCCcccccceeeCCccccCCceEEE----EecccCCEEEEEeCCcEEEEEEcccCcEEEEecc-CCCceE
Confidence 7432100 0112222334444443210 0000 0001126788888999999999999999987766 555665
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 335 DIAWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 335 ~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
.-+-+....=++.....|.|.-..++...+
T Consensus 306 ~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 306 VTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 555544444455566888888887776544
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.45 E-value=0.1 Score=51.26 Aligned_cols=229 Identities=11% Similarity=0.007 Sum_probs=133.7
Q ss_pred EEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceEEEecccccCe
Q 010051 70 LRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSG-SVDNSCIIWDVNKGSVLQILDAHFHYV 148 (519)
Q Consensus 70 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~v 148 (519)
+.|+ .+..|+..++..... .....+. .-..+..|+|.+.+..|+.+ ..++.|+.+++........+.......
T Consensus 9 Ll~s-~~~~I~~i~l~~~~~----~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 9 LLFS-RRADIRRISLETNNN----NVAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp EEEE-ETTEEEEEESSCTTC----EEECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEE-eCCcEEEEECCCCCc----ceEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 4444 567788888865421 1111122 23468899999976666655 457899999986654433343333456
Q ss_pred EEEEEcCCCCeE-EEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEc
Q 010051 149 QGVAWDPLSKYV-ASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWS 227 (519)
Q Consensus 149 ~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (519)
..+++.+.+..| ++-...+.|.+.++........ . . ..-.....+++.
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l-----------------------------~-~-~~l~~P~~iavd 131 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL-----------------------------V-W-KDLDSPRALALD 131 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE-----------------------------E-C-SSCCCEEEEEEE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE-----------------------------E-e-CCCCCcccEEEc
Confidence 788888765555 4444567888888865431100 0 0 011235689999
Q ss_pred cCCCeEEEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEec
Q 010051 228 PDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIAT 307 (519)
Q Consensus 228 p~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~ 307 (519)
|...+|+.+... ....|...++....... +.......+.+++++++..| .++-..
T Consensus 132 p~~G~lY~tD~g--------~~~~I~r~~~dG~~~~~--l~~~~~~P~GlalD~~~~~L---------------Y~aD~~ 186 (628)
T 4a0p_A 132 PAEGFMYWTEWG--------GKPKIDRAAMDGSERTT--LVPNVGRANGLTIDYAKRRL---------------YWTDLD 186 (628)
T ss_dssp TTTTEEEEEECS--------SSCEEEEEETTSCSCEE--EECSCSSEEEEEEETTTTEE---------------EEEETT
T ss_pred cCCCeEEEeCCC--------CCCEEEEEeCCCCceEE--EECCCCCcceEEEccccCEE---------------EEEECC
Confidence 976666665421 12467777765433221 11234567889999876432 344445
Q ss_pred CCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCc
Q 010051 308 LNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDE 363 (519)
Q Consensus 308 d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~ 363 (519)
.+.|..+++..... ..+.. .......+++.. +.++++-...+.|...|..+++
T Consensus 187 ~~~I~~~d~dG~~~-~v~~~-~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 187 TNLIESSNMLGLNR-EVIAD-DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp TTEEEEEETTSCSC-EEEEE-CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEcCCCCce-EEeec-cCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 67899999876544 33433 334456777754 4444444456788888865554
No 300
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.44 E-value=0.046 Score=49.42 Aligned_cols=72 Identities=13% Similarity=0.047 Sum_probs=46.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eEEEec---ccccCeEEEEEcCC---CCeEEEeeC----C----C
Q 010051 103 RKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGS-VLQILD---AHFHYVQGVAWDPL---SKYVASLSS----D----R 167 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~---~h~~~v~~~~~~~~---~~~l~~~~~----d----g 167 (519)
-.....|+|.|+|+ |+.+..+|.|++++ .+++ .+..+. ........|+++|+ +..|+++.. + .
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34578999999997 55556679999997 4554 222211 12346789999997 555544433 2 5
Q ss_pred eEEEEecCC
Q 010051 168 TCRIYANRP 176 (519)
Q Consensus 168 ~i~iwd~~~ 176 (519)
.|..|+...
T Consensus 106 ~v~r~~~~~ 114 (354)
T 3a9g_A 106 RVIRGRLDG 114 (354)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 566676654
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.39 E-value=0.042 Score=49.28 Aligned_cols=156 Identities=16% Similarity=0.246 Sum_probs=85.2
Q ss_pred EEEEEEecCCCEEEEEc------------CCCcEEEEEecCCc-cccccccccc---cccccccC--------cceeEEE
Q 010051 16 VLTLDFHPISGLLATGG------------ADYDIKIWLINSGE-KQKKIPTASY---QNSLSYHG--------SAINILR 71 (519)
Q Consensus 16 V~~~~~sp~~~~la~~~------------~dg~i~iwd~~~~~-~~~~~~~~~~---~~~~~~~~--------~~v~~~~ 71 (519)
.-.++..|+|..+++++ .+|.|.++|..+.. ....+..... ...+..|. +.++-+.
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34566788876555542 68999999987431 1222221110 00111111 1222222
Q ss_pred Ecc--CCCeEEEEEcccCCCcccceeeeccccC-CCCeEEEEEcCCCCEEEEEe-----------------CCCeEEEEE
Q 010051 72 FSP--CGGELIIWKLHTTETGQAWKVLKNLSFH-RKDVLDLQWSTDGAFLLSGS-----------------VDNSCIIWD 131 (519)
Q Consensus 72 ~~~--~~~~i~vw~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~-----------------~dg~i~vwd 131 (519)
.+. .+..|.+|++..... ....+..+.+. -...+.+.+.++|.+.++.. ..|.|+.+|
T Consensus 132 vnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EECSTTCCEEEEEEEETTTT--EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EECCCCCCeEEEEEEECCCC--EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 221 246666776654322 22333444332 34578999999998777653 124565565
Q ss_pred cCCCceEEEecccccCeEEEEEcCCCCeEEEee-CCCeEEEEecCC
Q 010051 132 VNKGSVLQILDAHFHYVQGVAWDPLSKYVASLS-SDRTCRIYANRP 176 (519)
Q Consensus 132 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 176 (519)
. ++. ..+...-...+.++|+||++.|+.+. ..+.|..|++..
T Consensus 210 ~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 210 P--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp T--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C--CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 4 333 23323334568999999998877665 468899999864
No 302
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.36 E-value=0.078 Score=47.91 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=36.4
Q ss_pred eEEEEEecCCeEEEEeCCCCCceEE--EeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEe
Q 010051 300 RLIFAIATLNSLYIYDTESVPPIAI--LAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEF 359 (519)
Q Consensus 300 ~~~~~~~~d~~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~ 359 (519)
.++++....+.|...++..++.... +.......+..+++.|||.++++.. +..=+||.+
T Consensus 290 ~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td-~~~g~I~ri 350 (353)
T 2g8s_A 290 KLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD-ESSGELLKV 350 (353)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC-STTEEEEEE
T ss_pred cEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe-CCCCEEEEE
Confidence 5666666778888888876543322 2111235789999999998666543 223345554
No 303
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.33 E-value=0.089 Score=47.80 Aligned_cols=271 Identities=15% Similarity=0.155 Sum_probs=147.4
Q ss_pred CCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC
Q 010051 34 DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST 113 (519)
Q Consensus 34 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 113 (519)
...|.|-|+..+....+.+...... +-.-...|.++.- +..+.|+|+++. ..++.+.-. ..|.-=.|-.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~AdsA-IMnP~~~iiALra---g~~lQiFnle~K------~klks~~~~-e~VvfWkWis 115 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISADSA-IMNPASKVIALKA---GKTLQIFNIEMK------SKMKAHTMT-DDVTFWKWIS 115 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCSEE-EECSSSSCEEEEE---TTEEEEEETTTT------EEEEEEECS-SCCCEEEEEE
T ss_pred CCeEEEEECCCCCcceeccccccee-eeCCCCcEEEEec---CCeEEEEchHHh------hhhcceecC-CCceEEEecC
Confidence 3478999998876554332221111 1112234555553 899999999876 455554433 3455555643
Q ss_pred CCCEEEEEeCCCeEEEEEcCC-CceEEEecccc----cCeEEEEEcCCCCeEEEeeC-------CCeEEEEecCCCCccc
Q 010051 114 DGAFLLSGSVDNSCIIWDVNK-GSVLQILDAHF----HYVQGVAWDPLSKYVASLSS-------DRTCRIYANRPTKSKG 181 (519)
Q Consensus 114 ~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~----~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~ 181 (519)
.+.|+..+ +..|+-|++.. ..+.+.+..|. ..|.....+++.++++..+- .|.+.+|..+......
T Consensus 116 -~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ 193 (494)
T 1bpo_A 116 -LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 193 (494)
T ss_dssp -TTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEE
T ss_pred -CCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccch
Confidence 34555554 46799999974 34566665553 46777788899998865442 4778889887664322
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC---CCeEEEecCCcceeeeecccceEEEEecc
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD---GSFLLVPAGSYKISSMSESINSAYIFSRK 258 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~---g~~l~~~~~~~~~~~~~~~~~~i~i~~~~ 258 (519)
+... ......+.+.-+ ...++.+... ...+.+++.++.
T Consensus 194 ieGh--------------------------------aa~F~~~~~~g~~~~~~lf~fa~r~-------~~g~kLhi~Ei~ 234 (494)
T 1bpo_A 194 IEGH--------------------------------AASFAQFKMEGNAEESTLFCFAVRG-------QAGGKLHIIEVG 234 (494)
T ss_dssp ECCS--------------------------------EEEEEEEECTTCSSEEEEEEEEECS-------TTCCEEEEEECS
T ss_pred heee--------------------------------eeeeEEEecCCCCCCceEEEEEEec-------CCCcEEEEEEcC
Confidence 2111 111111111100 0112221111 011477777774
Q ss_pred CCCcccccCCCCCCCeEEEEEcCCccc--ccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEE
Q 010051 259 DLSRPALQLPGASKPVVAVRFCPLAFN--LRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDI 336 (519)
Q Consensus 259 ~~~~~~~~~~~~~~~v~~~~~sp~~~~--l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~ 336 (519)
...... .........+-|.|+... -++. .+...+..++..+.-|.|++||+.++.++..-+- ....|..-
T Consensus 235 ~~~~~~---~~f~kk~vdv~fppe~~~DFPvam----qvs~kygviyviTK~G~i~lyDleTgt~i~~nrI-s~~~iF~t 306 (494)
T 1bpo_A 235 TPPTGN---QPFPKKAVDVFFPPEAQNDFPVAM----QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVT 306 (494)
T ss_dssp CCCTTC---CCCCCEEEECCCCTTSTTCCEEEE----EEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEE
T ss_pred CCccCC---CCccceeeeeeCCcccccCceeEE----EecccCCEEEEEecCceEEEEecccceeeeeecc-cCCceEEe
Confidence 321000 111112223333332100 0000 0000125788888899999999999999887765 55666655
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEecCCcc
Q 010051 337 AWSNNARYLALSSQDGYCTLVEFENDEL 364 (519)
Q Consensus 337 ~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 364 (519)
+-+....=++.....|.|.-..++...+
T Consensus 307 ~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 307 APHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred cccCCCCcEEEEccCceEEEEEEccccc
Confidence 5555555566666888888877776543
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.28 E-value=0.091 Score=46.94 Aligned_cols=240 Identities=10% Similarity=0.066 Sum_probs=117.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEec----ccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCC
Q 010051 103 RKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILD----AHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTK 178 (519)
Q Consensus 103 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 178 (519)
...+.++.|.+++..++ ++..|.|. .....|+.=..+. .....+..+.|.+ +. ++.++..|.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 45799999987777676 45567653 3333443212211 1234688899876 34 444556664443 222222
Q ss_pred ccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEecc
Q 010051 179 SKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRK 258 (519)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~ 258 (519)
.-..... ...++..+..+.+.+++..++++. .+ .+ |-..
T Consensus 110 tW~~~~~----------------------------~~~~~~~~~~i~~~~~~~~~~~~~-~g----------~v--~~S~ 148 (327)
T 2xbg_A 110 SWSQIPL----------------------------DPKLPGSPRLIKALGNGSAEMITN-VG----------AI--YRTK 148 (327)
T ss_dssp SCEECCC----------------------------CTTCSSCEEEEEEEETTEEEEEET-TC----------CE--EEES
T ss_pred CceECcc----------------------------ccCCCCCeEEEEEECCCCEEEEeC-Cc----------cE--EEEc
Confidence 1000000 001122345677767776666543 21 22 1111
Q ss_pred CCCccc-ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEE-EeCCCCCceEEEeccccccEEEE
Q 010051 259 DLSRPA-LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYI-YDTESVPPIAILAGLHYAAITDI 336 (519)
Q Consensus 259 ~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~v-wd~~~~~~~~~~~~~~~~~i~~~ 336 (519)
+....- .........+..+.+.|++.. ++ .+..+.++. .|- .+..-..+.......+..+
T Consensus 149 DgG~tW~~~~~~~~~~~~~~~~~~~~~~----------------~~-~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~ 210 (327)
T 2xbg_A 149 DSGKNWQALVQEAIGVMRNLNRSPSGEY----------------VA-VSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNM 210 (327)
T ss_dssp STTSSEEEEECSCCCCEEEEEECTTSCE----------------EE-EETTSSEEEEECT-TCSSCEEEECCSSSCEEEE
T ss_pred CCCCCCEEeecCCCcceEEEEEcCCCcE----------------EE-EECCCcEEEEeCC-CCCceeECCCCCCCcccee
Confidence 111111 111233456888999887643 32 233344433 332 1222222222245678899
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCc-ccccCCCCcccccCCccEEEeecCCceeeecCCCCC
Q 010051 337 AWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNK-VSKDENKSPLVTKSEDMIIEASTNDKLVTAETKEPD 410 (519)
Q Consensus 337 ~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~~~~~~ 410 (519)
.++++++++++ +.+|.+++.+.+.+ ..+...... ......+..+.+.+++.+++++....+.........
T Consensus 211 ~~~~~g~~~~~-~~~G~~~~s~~D~G---~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S~DgG~t 281 (327)
T 2xbg_A 211 GFTPDGRLWMI-VNGGKIAFSDPDNS---ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQT 281 (327)
T ss_dssp EECTTSCEEEE-ETTTEEEEEETTEE---EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEESSTTSS
T ss_pred EECCCCCEEEE-eCCceEEEecCCCC---CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEeCCCCcc
Confidence 99999876654 46787777642222 222211111 011234667788888888887776555444443333
No 305
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.27 E-value=0.13 Score=48.30 Aligned_cols=76 Identities=13% Similarity=-0.002 Sum_probs=42.7
Q ss_pred EecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---CCeEEEEEc
Q 010051 8 INWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---GGELIIWKL 84 (519)
Q Consensus 8 ~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~i~vw~~ 84 (519)
.....-...++|+|.|+|+++++-...+.|++++..++.......... .............|+|+|+ ++.|++...
T Consensus 21 ~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~-~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 21 VILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPE-IVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTT-CCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCc-cccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 333334567899999999988876544568877655443221110000 0000012345667777776 777777664
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.25 E-value=0.034 Score=49.02 Aligned_cols=63 Identities=11% Similarity=0.069 Sum_probs=36.1
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCc---eEEE--ecccccCeEEEEEcCCCCeEEEeeCC-----CeEEEEecCCCC
Q 010051 114 DGAFLLSGSVD-----NSCIIWDVNKGS---VLQI--LDAHFHYVQGVAWDPLSKYVASLSSD-----RTCRIYANRPTK 178 (519)
Q Consensus 114 ~~~~l~~~~~d-----g~i~vwd~~~~~---~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 178 (519)
++..++.|+.+ ..+.+||+.+++ .... +.........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 46677777754 469999998876 3322 1111112222222 46667777654 357778877654
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.18 E-value=0.13 Score=46.67 Aligned_cols=113 Identities=16% Similarity=0.214 Sum_probs=74.7
Q ss_pred eeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc-cc------------ccC----CCCCCCeEEEEEcCC
Q 010051 220 FFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-PA------------LQL----PGASKPVVAVRFCPL 282 (519)
Q Consensus 220 ~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-~~------------~~~----~~~~~~v~~~~~sp~ 282 (519)
.+..+..+|+|++||+.+.. .|.|..+..... .. ..+ .....+|..+.|||-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-----------~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl 135 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-----------EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPK 135 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-----------EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTT
T ss_pred ceeEEEECCCCCEEEEecCC-----------eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccc
Confidence 36679999999999998664 555555542110 00 001 113578999999997
Q ss_pred cccccccCCCCcccccceEEEEEecCCeEEEEeCCCCC--ceEEEec--------cccccEEEEEEcCCCCEEEEEe--C
Q 010051 283 AFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVP--PIAILAG--------LHYAAITDIAWSNNARYLALSS--Q 350 (519)
Q Consensus 283 ~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~--~~~~~~~--------~~~~~i~~~~~s~~g~~l~~~~--~ 350 (519)
+.. + ..+++-..|+.|++||+.... +. .+.. .....|.+++|..++-.|...+ .
T Consensus 136 ~~~-------d------s~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~ 201 (452)
T 3pbp_A 136 SYR-------D------SCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTE 201 (452)
T ss_dssp BGG-------G------CEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTT
T ss_pred cCC-------C------CeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCC
Confidence 743 1 579999999999999998632 22 2221 0225789999999887666654 7
Q ss_pred CCcEEEE
Q 010051 351 DGYCTLV 357 (519)
Q Consensus 351 dg~i~vw 357 (519)
.|.|+-.
T Consensus 202 ~GDIYAl 208 (452)
T 3pbp_A 202 GGDIFAF 208 (452)
T ss_dssp SCEEEEE
T ss_pred CCCEEEE
Confidence 7877543
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.15 E-value=0.1 Score=46.82 Aligned_cols=199 Identities=10% Similarity=0.098 Sum_probs=105.7
Q ss_pred CeEEEEEcCCCCEEEEE------------eCCCeEEEEEcCC--CceEEEe--cc-----cccCeEEEEEcC--CCC-eE
Q 010051 105 DVLDLQWSTDGAFLLSG------------SVDNSCIIWDVNK--GSVLQIL--DA-----HFHYVQGVAWDP--LSK-YV 160 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~------------~~dg~i~vwd~~~--~~~~~~~--~~-----h~~~v~~~~~~~--~~~-~l 160 (519)
..-.++..|+|..++++ ..+|.|.++|+.+ ++. ..+ .+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 44566677877544443 1689999999874 222 222 21 223556777655 343 34
Q ss_pred EEee-C--CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec
Q 010051 161 ASLS-S--DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA 237 (519)
Q Consensus 161 ~~~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~ 237 (519)
+++. . +.+|.+|++....... ..... +. ...-...+.+.+.++|.+.+...
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~------~~~~~-------------------~~-g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSL------LHLKT-------------------IR-HKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEE------EEEEE-------------------EC-CTTCSSEEEEEEEETTEEEEEES
T ss_pred EEEECCCCCCeEEEEEEECCCCEE------EEEec-------------------cc-cCCCCCCceEEEeCCCCEEecCC
Confidence 4432 2 4567787765532100 00000 00 01124467899999998777644
Q ss_pred CCcce---ee----eecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCe
Q 010051 238 GSYKI---SS----MSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNS 310 (519)
Q Consensus 238 ~~~~~---~~----~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~ 310 (519)
....- .. .....+.++.++.. . ...+...-...+.++|+||++.+ +++-+..+.
T Consensus 184 ~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~-~~~~~~~l~~pNGia~spDg~~l---------------Yvadt~~~~ 244 (355)
T 3sre_A 184 HYFIDPYLKSWEMHLGLAWSFVTYYSPN---D-VRVVAEGFDFANGINISPDGKYV---------------YIAELLAHK 244 (355)
T ss_dssp CSCSSHHHHHHHHHTTCCCEEEEEECTT---C-CEEEEEEESSEEEEEECTTSSEE---------------EEEEGGGTE
T ss_pred cEeCCcccccchhhccCCccEEEEEECC---e-EEEeecCCcccCcceECCCCCEE---------------EEEeCCCCe
Confidence 21000 00 01122456556542 1 22222223456889999998543 344445678
Q ss_pred EEEEeCCC-CCc--eEEEeccccccEEEEEEcC-CCCEEEEEeCC
Q 010051 311 LYIYDTES-VPP--IAILAGLHYAAITDIAWSN-NARYLALSSQD 351 (519)
Q Consensus 311 i~vwd~~~-~~~--~~~~~~~~~~~i~~~~~s~-~g~~l~~~~~d 351 (519)
|+.|++.. +.. ...+ . ..+....+++.+ +|++.+++..+
T Consensus 245 I~~~~~~~~g~l~~~~~~-~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 245 IHVYEKHANWTLTPLRVL-S-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEECTTSCEEEEEEE-E-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEEEECCCCcEecCEEE-e-CCCCCceEEEeCCCCcEEEEecCC
Confidence 99999863 322 1233 2 245667889998 58887766544
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.11 E-value=0.032 Score=49.40 Aligned_cols=63 Identities=17% Similarity=0.107 Sum_probs=37.4
Q ss_pred CCCEEEEEeCC----CeEEEEEcCCCceEEE--ecccccCeEEEEEcCCCCeEEEeeCC------CeEEEEecCCCC
Q 010051 114 DGAFLLSGSVD----NSCIIWDVNKGSVLQI--LDAHFHYVQGVAWDPLSKYVASLSSD------RTCRIYANRPTK 178 (519)
Q Consensus 114 ~~~~l~~~~~d----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~ 178 (519)
++..++.|+.+ ..+.+||+.+++.... +.........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 56677777754 6789999988764332 2111112222233 56677777765 357888887654
No 310
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.06 E-value=0.42 Score=50.53 Aligned_cols=101 Identities=14% Similarity=0.088 Sum_probs=63.3
Q ss_pred EEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCC------CCEEEEEeC-CCeEEEEEcCCCceEEEec
Q 010051 70 LRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTD------GAFLLSGSV-DNSCIIWDVNKGSVLQILD 142 (519)
Q Consensus 70 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~-dg~i~vwd~~~~~~~~~~~ 142 (519)
+.++ .++.|.++.+..+. +....... -...|.|+++.|. +.+++.|.. |++|+|+++.+.+.+....
T Consensus 526 vvva-~g~~l~~fel~~~~----L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 526 VVVA-VGRALYYLQIHPQE----LRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp EEEE-ETTEEEEEEEETTE----EEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred EEEE-ECCEEEEEEeeCCc----eeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 4444 36788888876531 12222222 3567999999863 368999986 9999999998766554322
Q ss_pred cc-ccCeEEEEEc--CCCCeEEEeeCCCeEEEEecCC
Q 010051 143 AH-FHYVQGVAWD--PLSKYVASLSSDRTCRIYANRP 176 (519)
Q Consensus 143 ~h-~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~ 176 (519)
-. .....++.+. ....+|..|-.||.+.-+.+..
T Consensus 600 L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 600 LGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp CCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT
T ss_pred CCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC
Confidence 11 1233444332 2345788888999987766543
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.05 E-value=0.28 Score=48.14 Aligned_cols=344 Identities=9% Similarity=-0.012 Sum_probs=161.5
Q ss_pred CCEEEEEEecCCCEEE-EEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCC---
Q 010051 14 KPVLTLDFHPISGLLA-TGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTET--- 89 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~--- 89 (519)
.....|++.+.+..|+ +-...+.|.+.+....... .+ +...-.....|++.|.+|.|++=|......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~-~l--------~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r 154 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VL--------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIER 154 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE--------ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE-EE--------EeCCCCCCceEEEecCCCeEEEeccCCCCEEEE
Confidence 5688999999666544 5556788999998754321 11 112234467888888888777666432100
Q ss_pred ----cccceeeeccccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEee
Q 010051 90 ----GQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLS 164 (519)
Q Consensus 90 ----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 164 (519)
+.....+ ....-.....|++++++..|+.+. ..+.|...|+........+.+......+|++..+ ..+++-.
T Consensus 155 ~~~dG~~~~~l--~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~ 231 (619)
T 3s94_A 155 AGMDGSSRFII--INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDW 231 (619)
T ss_dssp EETTSCSCEEE--ECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECT
T ss_pred EECCCCceEEE--EeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecC
Confidence 0000111 111334578999999877776664 4678999998654332222212222346677654 4444545
Q ss_pred CCCeEEEEecCCCCcccccccc---ceeeEEEeccCccccc-CC---ccccceeeecCCCcceeeEEEEccCCCeEEE--
Q 010051 165 SDRTCRIYANRPTKSKGVEKMN---YVCQHVITKAGQHSTD-DS---KSAKNHLFHDETLPSFFRRLAWSPDGSFLLV-- 235 (519)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~-- 235 (519)
..+.|...|..+++........ ......+....+.... .. .....++-..........| ..|.|-.|..
T Consensus 232 ~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C--~C~~g~~l~~d~ 309 (619)
T 3s94_A 232 STHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQC--ACPTGVKLLENG 309 (619)
T ss_dssp TTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEE--ECCTTCCBCTTS
T ss_pred CCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceE--eCCchheecccC
Confidence 5778888888776543221111 1111111111110000 00 0000000000000000111 1122211110
Q ss_pred --ecCCcceeeeecccceEEEEeccCCCcccccCC-CCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEE
Q 010051 236 --PAGSYKISSMSESINSAYIFSRKDLSRPALQLP-GASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLY 312 (519)
Q Consensus 236 --~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~ 312 (519)
+........+-.....|+..++.........+. ..-..+..++|.+.+. ..+++-...+.|+
T Consensus 310 ~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~---------------~ly~sD~~~~~I~ 374 (619)
T 3s94_A 310 KTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEG---------------YIYWTDDEVRAIR 374 (619)
T ss_dssp SCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTT---------------EEEEEETTTTEEE
T ss_pred cccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCC---------------eEEEEeCCCCeEE
Confidence 000000000111123555555543322111121 1224567788887542 2233444567888
Q ss_pred EEeCCCCCceEEEeccccccEEEEEEcCCCC-EEEEEeCCCcEEEEEecCCcccceeeecCCcccccCCCCcccccCCcc
Q 010051 313 IYDTESVPPIAILAGLHYAAITDIAWSNNAR-YLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDM 391 (519)
Q Consensus 313 vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 391 (519)
.+++........+.. .......+++.+.+. ++++-+..+.|.+.+++.... ..+...+ ......+++.|...
T Consensus 375 r~~~~g~~~~~v~~~-~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~-~~l~~~~-----l~~P~~iavdp~~G 447 (619)
T 3s94_A 375 RSFIDGSGSQFVVTA-QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR-KILISED-----LEEPRAIVLDPMVG 447 (619)
T ss_dssp EEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTT-----CCSEEEEEEETTTT
T ss_pred EEEcCCCccEEEEEC-CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE-EEEEECC-----CCCeeeEEEEcCCC
Confidence 888876544444433 335677899987555 444445568899988875432 2221111 23456677777533
Q ss_pred EE
Q 010051 392 II 393 (519)
Q Consensus 392 ~l 393 (519)
.|
T Consensus 448 ~l 449 (619)
T 3s94_A 448 YM 449 (619)
T ss_dssp EE
T ss_pred cE
Confidence 33
No 312
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.05 E-value=0.068 Score=46.92 Aligned_cols=174 Identities=6% Similarity=-0.016 Sum_probs=96.9
Q ss_pred ceeeEEEEccCCCeEEEec-CCcceeeeecccceEEEEeccCCCcccccCCC----C--CCCeEEEEE---cCCcccccc
Q 010051 219 SFFRRLAWSPDGSFLLVPA-GSYKISSMSESINSAYIFSRKDLSRPALQLPG----A--SKPVVAVRF---CPLAFNLRE 288 (519)
Q Consensus 219 ~~i~~~~~sp~g~~l~~~~-~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~----~--~~~v~~~~~---sp~~~~l~~ 288 (519)
....++.|++....+.+++ .. +.|..|+..........+.+ . ...+..+.| .|+++.+++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~----------g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYK----------GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTT----------TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccC----------CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEE
Confidence 4456899988665555554 33 67888887533211122322 1 123578889 577644332
Q ss_pred cCCCCcccccceEEEEEecCCeEEEEeCC---CCCceEEEecc-cc-----------ccEEEEEEcCCCCEEEEEeCC-C
Q 010051 289 SNSAGFFKLPYRLIFAIATLNSLYIYDTE---SVPPIAILAGL-HY-----------AAITDIAWSNNARYLALSSQD-G 352 (519)
Q Consensus 289 ~~~~g~~~~~~~~~~~~~~d~~i~vwd~~---~~~~~~~~~~~-~~-----------~~i~~~~~s~~g~~l~~~~~d-g 352 (519)
......+...... .+.+..|..||+. +++.+....-. .. ....+++..++|+..++++.- +
T Consensus 83 ~~~~~af~~~g~~---~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~ 159 (334)
T 2p9w_A 83 MKNAKSFNFADQS---SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP 159 (334)
T ss_dssp EEETTTTCTTSCC---SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC
T ss_pred Ecccccccccccc---cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC
Confidence 1100000000000 0125789999999 78776655420 11 248899999999999998887 7
Q ss_pred cEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEeecCCcee-eecC
Q 010051 353 YCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLV-TAET 406 (519)
Q Consensus 353 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d~~i-~~~~ 406 (519)
.|...+-+... ...+.+...........+.+++.|+|.+|++....+.+ ..+.
T Consensus 160 ~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 160 AIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred eEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 76555544332 22232222111223457789999999777666545544 4443
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.03 E-value=0.17 Score=45.61 Aligned_cols=59 Identities=14% Similarity=0.034 Sum_probs=38.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEe-------cccccCeEEEEEcCC---CCeEEEe
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQIL-------DAHFHYVQGVAWDPL---SKYVASL 163 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~h~~~v~~~~~~~~---~~~l~~~ 163 (519)
...+.|+|.|+|++|+.+...|.|++++. .+.....+ .........|+|+|+ +..|+.+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 35789999999984555667899999985 34321111 112345789999996 4555444
No 314
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.88 E-value=0.13 Score=48.28 Aligned_cols=280 Identities=10% Similarity=0.081 Sum_probs=142.1
Q ss_pred EEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccceeeecc-ccCCCC
Q 010051 27 LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNL-SFHRKD 105 (519)
Q Consensus 27 ~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~-~~~~~~ 105 (519)
.+.+|+..|.|+|+-+-+++.++.++.........+ -+.. .+.+.+... .-..+.
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~--------------------G~t~----esk~il~~~~~~~~gD 127 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGW--------------------GLTN----ESRHIMGDSAKFLNGD 127 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCT--------------------TTBH----HHHHHHGGGGGCCCCC
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCccc--------------------CCch----hHHHHHhcCCCccCCC
Confidence 356888999999999999999988875433211100 0000 000111000 000111
Q ss_pred e--EEEEEcC---CCCEEEEEeC-CCeEEEEEcCCCceEEEec-ccccCeEEEEEc--CCCCeEEEeeCCCeEEEEecCC
Q 010051 106 V--LDLQWST---DGAFLLSGSV-DNSCIIWDVNKGSVLQILD-AHFHYVQGVAWD--PLSKYVASLSSDRTCRIYANRP 176 (519)
Q Consensus 106 v--~~~~~s~---~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~ 176 (519)
. ..+++.. ||++|+.-.. ...|...++...++-+.+. .....+.+++|- |+..|++.+++...-.- ..
T Consensus 128 ~HHp~~S~tdg~yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~p---nd 204 (638)
T 3sbq_A 128 CHHPHISMTDGKYDGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHP---ND 204 (638)
T ss_dssp CCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESS---CS
T ss_pred cCCCcccccCCeeeeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCC---CC
Confidence 1 1233322 6788887764 6688889998887765553 345678888886 78888888876421110 11
Q ss_pred CCcccc-ccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceee-----eecccc
Q 010051 177 TKSKGV-EKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISS-----MSESIN 250 (519)
Q Consensus 177 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~-----~~~~~~ 250 (519)
+....+ ....+ ..+...+. ....+.......+....+...++|++.++.+-+..... ......
T Consensus 205 g~~~~~~~~~~y---~~f~~iD~--------~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D 273 (638)
T 3sbq_A 205 GKVFDLQDENSY---TMYNAIDA--------ETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERD 273 (638)
T ss_dssp SSCCCTTSTTEE---EEEEEEET--------TTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCE
T ss_pred CcccccCChhhc---eEEEEEcC--------CccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCccccc
Confidence 110000 00011 11221111 00001111111234446777888988888764322110 011222
Q ss_pred eEEEEec-------------------------cCC---CcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEE
Q 010051 251 SAYIFSR-------------------------KDL---SRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLI 302 (519)
Q Consensus 251 ~i~i~~~-------------------------~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~ 302 (519)
-+.++++ +.. ......+..-......+.++|||+++ +
T Consensus 274 ~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi---------------~ 338 (638)
T 3sbq_A 274 WVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYF---------------I 338 (638)
T ss_dssp EEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEE---------------E
T ss_pred EEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEE---------------E
Confidence 3444443 220 00000000111223346677777543 4
Q ss_pred EEEecCCeEEEEeCCC------CCc-------eEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 010051 303 FAIATLNSLYIYDTES------VPP-------IAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFEN 361 (519)
Q Consensus 303 ~~~~~d~~i~vwd~~~------~~~-------~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~ 361 (519)
+++--+.++.++|+.. ++. ..... -.-.....+|.++|....+.-.|..|..|++..
T Consensus 339 v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 339 AAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred EcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 4444578999999873 111 12222 234567789999996666667899999999975
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.87 E-value=0.62 Score=49.31 Aligned_cols=36 Identities=33% Similarity=0.292 Sum_probs=29.0
Q ss_pred CCCEEEEEEecC------CCEEEEEcC-CCcEEEEEecCCccc
Q 010051 13 TKPVLTLDFHPI------SGLLATGGA-DYDIKIWLINSGEKQ 48 (519)
Q Consensus 13 ~~~V~~~~~sp~------~~~la~~~~-dg~i~iwd~~~~~~~ 48 (519)
...|.|+++.|. ++++|+|.. |++|+|+++.+.+.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 467999999864 369999996 999999999865544
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.86 E-value=0.22 Score=45.21 Aligned_cols=148 Identities=12% Similarity=0.110 Sum_probs=87.0
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCceEEEeccc----ccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccc-c
Q 010051 110 QWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAH----FHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVE-K 184 (519)
Q Consensus 110 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~ 184 (519)
..+.+|..++.+- ++.||.-++......+.+... -..|..+..+|+|++|+..+ +..|.|..+..+...... .
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 3445677777664 478888888755444444332 23578899999999998886 557888888743221111 0
Q ss_pred --ccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccC---CCeEEEecCCcceeeeecccceEEEEeccC
Q 010051 185 --MNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPD---GSFLLVPAGSYKISSMSESINSAYIFSRKD 259 (519)
Q Consensus 185 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~---g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~ 259 (519)
....+ ..+.... . .......|..+.|+|- +..|++-..+ +.|++||+..
T Consensus 105 ~~~~~q~-~ty~l~~--------------~-~~~~~s~I~qVlWHPl~~~ds~LVVLtsD----------~~Ir~yDl~~ 158 (452)
T 3pbp_A 105 IQDAFQI-FHYSIDE--------------E-EVGPKSSIKKVLFHPKSYRDSCIVVLKED----------DTITMFDILN 158 (452)
T ss_dssp HHHTTEE-EEEEGGG--------------C-C--CCCCEEEEEECTTBGGGCEEEEEETT----------SCEEEEETTC
T ss_pred cccccce-eEEEcCC--------------c-ccCCCCceeEEEeccccCCCCeEEEEecC----------CEEEEEEccc
Confidence 00111 1111100 0 0112567999999995 4567776666 6899999975
Q ss_pred CC-ccc--------ccCCCCCCCeEEEEEcCCccc
Q 010051 260 LS-RPA--------LQLPGASKPVVAVRFCPLAFN 285 (519)
Q Consensus 260 ~~-~~~--------~~~~~~~~~v~~~~~sp~~~~ 285 (519)
.. .+. .-.......|.+++|.+++-.
T Consensus 159 s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lT 193 (452)
T 3pbp_A 159 SQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLT 193 (452)
T ss_dssp TTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSC
T ss_pred CCCCCcchhccccccCCCcccceEEEEEEcCCCcE
Confidence 22 222 111222356888899887644
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.86 E-value=0.12 Score=45.38 Aligned_cols=63 Identities=11% Similarity=0.106 Sum_probs=36.0
Q ss_pred CCCEEEEEeCC-----CeEEEEEcCCCceEEE--ecccccCeEEEEEcCCCCeEEEeeCCC-----eEEEEecCCCC
Q 010051 114 DGAFLLSGSVD-----NSCIIWDVNKGSVLQI--LDAHFHYVQGVAWDPLSKYVASLSSDR-----TCRIYANRPTK 178 (519)
Q Consensus 114 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~ 178 (519)
++..++.|+.+ ..+.+||..+.+.... +.........+.+ ++..++.|+.++ .+.+||+.+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 56677777754 3688999987764332 1111112222222 466777777653 46777777654
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.75 E-value=0.28 Score=43.74 Aligned_cols=75 Identities=13% Similarity=0.057 Sum_probs=43.5
Q ss_pred eEEecCCCCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC---CCeEEEE
Q 010051 6 LQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC---GGELIIW 82 (519)
Q Consensus 6 ~~~~~~h~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~i~vw 82 (519)
+......-..-+.|+|.|||.+|++--..|.|++++...++... +.. ..............|+|+|+ ++.|+++
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~--~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGE--VPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEE--CTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-ecc--cCceeecCCCCceeeEeccccccCCEEEEE
Confidence 34444445678899999999988877658889888755444211 100 00011122344566666664 5666654
Q ss_pred E
Q 010051 83 K 83 (519)
Q Consensus 83 ~ 83 (519)
.
T Consensus 101 y 101 (347)
T 3das_A 101 F 101 (347)
T ss_dssp E
T ss_pred E
Confidence 3
No 319
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.75 E-value=0.11 Score=45.53 Aligned_cols=198 Identities=9% Similarity=0.014 Sum_probs=104.7
Q ss_pred CCCCEEEEEe--CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCC--------------CeEEEEecCC
Q 010051 113 TDGAFLLSGS--VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSD--------------RTCRIYANRP 176 (519)
Q Consensus 113 ~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~ 176 (519)
.+|.+|+... .++.|+..+..... ...+... .+--+++++.+|+.+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4577777664 35677777764333 3444332 133457888888776543 3456666655
Q ss_pred CCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEec--CCcceeeeecccceEEE
Q 010051 177 TKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPA--GSYKISSMSESINSAYI 254 (519)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~--~~~~~~~~~~~~~~i~i 254 (519)
.+...+ .. -....|++++.+|+... .. ....|+.
T Consensus 98 ~~~~~l------------------------------~~------~~~~~~s~~g~~Iy~~~~~~~--------~~~~Iy~ 133 (302)
T 3s25_A 98 HGSTVL------------------------------DP------DPCIYASLIGNYIYYLHYDTQ--------TATSLYR 133 (302)
T ss_dssp CCCEEE------------------------------EC------SCEEEEEEETTEEEEEEESSS--------SCEEEEE
T ss_pred CcceEe------------------------------ec------CCccEEEEeCCEEEEEeecCC--------CCceEEE
Confidence 431110 00 11347788999988764 11 1146666
Q ss_pred EeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEE
Q 010051 255 FSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAIT 334 (519)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~ 334 (519)
.++.... ...+..+.. ..|+|+++.| .++......|++.++..+.....+.+ ...
T Consensus 134 ~~~dGs~--~~~lt~~~~----~~~~~~g~~i---------------y~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~ 188 (302)
T 3s25_A 134 IRIDGEE--KKKIKNHYL----FTCNTSDRYF---------------YYNNPKNGQLYRYDTASQSEALFYDC----NCY 188 (302)
T ss_dssp EETTSCC--CEEEESSCC----CCSEEETTEE---------------EEECTTTCCEEEEETTTTEEEEEECS----CEE
T ss_pred EECCCCC--eEEEeCCCc----eEeeEECCEE---------------EEEeCCCceEEEEECCCCCEEEEeCC----Ccc
Confidence 6665332 222222221 3456666443 23333356888888876655444332 222
Q ss_pred EEEEcCCCCEEEEEeCCC--cEEEEEecCCcccceeeecCCcccccCCCCcccccCCccEEEee
Q 010051 335 DIAWSNNARYLALSSQDG--YCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEAS 396 (519)
Q Consensus 335 ~~~~s~~g~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 396 (519)
..++|++.+|+-....+ .|..-+++.... ..+ ... .+ ..++|++.+|..+
T Consensus 189 -~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~L--t~~------~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 189 -KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVL--TEA------NI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp -EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EEC--SCS------CE--EEEEEETTEEEEE
T ss_pred -ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEE--eCC------Cc--ceEEECCCEEEEE
Confidence 23569999888766543 455555554432 111 111 11 2377788777665
No 320
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.71 E-value=0.3 Score=51.62 Aligned_cols=271 Identities=16% Similarity=0.132 Sum_probs=137.4
Q ss_pred CCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcC
Q 010051 34 DYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWST 113 (519)
Q Consensus 34 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 113 (519)
...|.|.|+..+..+.+.+.......+ .-...|.++. .+..+.|+|+.+. ..++.+.- ..+|.-=.|-.
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~AdsAIM-nP~~~iiALr---ag~~lQiFnl~~k------~klks~~~-~e~VvfWkWis 115 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISADSAIM-NPASKVIALK---AGKTLQIFNIEMK------SKMKAHTM-TDDVTFWKWIS 115 (1630)
T ss_pred CceEEEEECCCCCCcccccccchhhcc-CCCcceEEEe---cCCeEEEeehHHh------hhhccccc-CCCceEEEecC
Confidence 347899999887655433322111111 1123455555 3899999999866 33443332 33455556643
Q ss_pred CCCEEEEEeCCCeEEEEEcCC-CceEEEeccc----ccCeEEEEEcCCCCeEEEee-------CCCeEEEEecCCCCccc
Q 010051 114 DGAFLLSGSVDNSCIIWDVNK-GSVLQILDAH----FHYVQGVAWDPLSKYVASLS-------SDRTCRIYANRPTKSKG 181 (519)
Q Consensus 114 ~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~ 181 (519)
+ +.|+..+ +..|+.|++.. ..+...+..| ...|..-..+++.++++..| -.|.+.+|.........
T Consensus 116 ~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ 193 (1630)
T 1xi4_A 116 L-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 193 (1630)
T ss_pred C-CeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh
Confidence 3 3455444 46799999964 2344444444 35677777889999876544 24788888877654332
Q ss_pred cccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCC
Q 010051 182 VEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLS 261 (519)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 261 (519)
+......... ........+..+.+++.- . ...+.++|.++....
T Consensus 194 iegha~~F~~------------------~~~~~~~~~~~l~~f~~~-----------~-------~~g~kLhi~Ei~~~~ 237 (1630)
T 1xi4_A 194 IEGHAASFAQ------------------FKMEGNAEESTLFCFAVR-----------G-------QAGGKLHIIEVGTPP 237 (1630)
T ss_pred hhHhHhhhhe------------------eccCCCCCCceEEEEEEe-----------c-------CCCceEEEEecCCCc
Confidence 2111100000 000000111112122111 0 001467777764320
Q ss_pred cccccCCCCCCCeEEEEEcCCccc----ccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEE
Q 010051 262 RPALQLPGASKPVVAVRFCPLAFN----LRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIA 337 (519)
Q Consensus 262 ~~~~~~~~~~~~v~~~~~sp~~~~----l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 337 (519)
.. -.........+-|.|+... ..-. ...+..++..+.-|.|++||+.++.++..-+- ....|...+
T Consensus 238 ~~---~~~f~kk~~~~~~~~~~~~Dfpv~~~v------s~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri-s~~~iF~~~ 307 (1630)
T 1xi4_A 238 TG---NQPFPKKAVDVFFPPEAQNDFPVAMQI------SEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTA 307 (1630)
T ss_pred cC---CCCCccccccccCCcccccCcceEEEe------ccccCEEEEEecCceEEEEecccchhhhhccc-cCCceEEec
Confidence 00 0111122333444443110 0000 00125688888889999999999988765544 344454444
Q ss_pred EcCCCCEEEEEeCCCcEEEEEecCCc
Q 010051 338 WSNNARYLALSSQDGYCTLVEFENDE 363 (519)
Q Consensus 338 ~s~~g~~l~~~~~dg~i~vwd~~~~~ 363 (519)
-+....=++.....|.|.-..++...
T Consensus 308 ~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 308 PHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred cCCCCCceEEEcCCceEEEEEEccch
Confidence 44333334444567777666666543
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.67 E-value=0.11 Score=45.81 Aligned_cols=63 Identities=11% Similarity=0.128 Sum_probs=35.1
Q ss_pred CCCEEEEEe-CC-----CeEEEEEcCCCceEEE--ecccccCeEEEEEcCCCCeEEEeeCC-----CeEEEEecCCCC
Q 010051 114 DGAFLLSGS-VD-----NSCIIWDVNKGSVLQI--LDAHFHYVQGVAWDPLSKYVASLSSD-----RTCRIYANRPTK 178 (519)
Q Consensus 114 ~~~~l~~~~-~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 178 (519)
++..++.|+ .+ ..+.+||+.+++.... +.........+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 345566666 32 4788999887764332 1111111222222 46677777755 358888887765
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.66 E-value=0.57 Score=46.01 Aligned_cols=151 Identities=9% Similarity=-0.052 Sum_probs=89.0
Q ss_pred CCEEEEEEecCCCEE-EEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCC----
Q 010051 14 KPVLTLDFHPISGLL-ATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTE---- 88 (519)
Q Consensus 14 ~~V~~~~~sp~~~~l-a~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~---- 88 (519)
.....|++.+.+..| ++-...+.|.+.++..... ..+ +...-.....|++.|..|.|++-|.....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l--------~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r 150 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVL--------VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDR 150 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEE--------ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEE--------EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEE
Confidence 456788888766544 4445567888888764432 111 11123456889999888877766643110
Q ss_pred ---CcccceeeeccccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEee
Q 010051 89 ---TGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLS 164 (519)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 164 (519)
.+. ....+...-.....|+++++++.|+.+. ..+.|..+|+..... ..+.........+++.. +..+++-.
T Consensus 151 ~~~dG~---~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~ 225 (628)
T 4a0p_A 151 AAMDGS---ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDW 225 (628)
T ss_dssp EETTSC---SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEET
T ss_pred EeCCCC---ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecC
Confidence 000 0111112345678999999877777664 467899999865443 33333334456777764 44444444
Q ss_pred CCCeEEEEecCCCC
Q 010051 165 SDRTCRIYANRPTK 178 (519)
Q Consensus 165 ~dg~i~iwd~~~~~ 178 (519)
..+.|...|..+++
T Consensus 226 ~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 226 SRRSIERANKTSGQ 239 (628)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CCCEEEEEECCCCC
Confidence 56778888765554
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.65 E-value=0.14 Score=45.18 Aligned_cols=63 Identities=10% Similarity=0.016 Sum_probs=35.1
Q ss_pred CCCEEEEEeC----C-----CeEEEEEcCCCceEEE--ecccccCeEEEEEcCCCCeEEEeeCC-----CeEEEEecCCC
Q 010051 114 DGAFLLSGSV----D-----NSCIIWDVNKGSVLQI--LDAHFHYVQGVAWDPLSKYVASLSSD-----RTCRIYANRPT 177 (519)
Q Consensus 114 ~~~~l~~~~~----d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 177 (519)
++..++.|+. + ..+.+||+.+.+.... +.........+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5666666665 2 4688999987754332 1111112222233 46666776643 35777887765
Q ss_pred C
Q 010051 178 K 178 (519)
Q Consensus 178 ~ 178 (519)
+
T Consensus 148 ~ 148 (308)
T 1zgk_A 148 E 148 (308)
T ss_dssp E
T ss_pred e
Confidence 4
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.57 E-value=0.27 Score=43.51 Aligned_cols=67 Identities=12% Similarity=0.086 Sum_probs=36.0
Q ss_pred EEcCCCCEEEEEeC----C-------CeEEEEEcCCCceEEE--ecccccCeEEEEEcCCCCeEEEeeCC--------Ce
Q 010051 110 QWSTDGAFLLSGSV----D-------NSCIIWDVNKGSVLQI--LDAHFHYVQGVAWDPLSKYVASLSSD--------RT 168 (519)
Q Consensus 110 ~~s~~~~~l~~~~~----d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~d--------g~ 168 (519)
+...++..++.|+. + ..+.+||..+++.... +.........+.+ ++..++.|+.+ ..
T Consensus 41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCC
T ss_pred EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccce
Confidence 33457777777773 1 1378899888764321 1111111122222 45666666632 35
Q ss_pred EEEEecCCCC
Q 010051 169 CRIYANRPTK 178 (519)
Q Consensus 169 i~iwd~~~~~ 178 (519)
+.+||+.+.+
T Consensus 119 ~~~~d~~~~~ 128 (315)
T 4asc_A 119 VMCYDRLSFK 128 (315)
T ss_dssp EEEEETTTTE
T ss_pred EEEECCCCCc
Confidence 7788877654
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.56 E-value=0.39 Score=42.85 Aligned_cols=265 Identities=13% Similarity=0.066 Sum_probs=124.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceE--EEe----cccccCeEEEEEcCC---CCeEEEe---eCCCeE
Q 010051 102 HRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVL--QIL----DAHFHYVQGVAWDPL---SKYVASL---SSDRTC 169 (519)
Q Consensus 102 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~----~~h~~~v~~~~~~~~---~~~l~~~---~~dg~i 169 (519)
.-...+.|+|.|||.++++-...|.|++++..+++.. ..+ .........|+++|+ +.+|+.. ..++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456789999999987766655899999987666532 212 123456889999995 3444432 234555
Q ss_pred EEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceee---ee
Q 010051 170 RIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISS---MS 246 (519)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~---~~ 246 (519)
.-|.+........ .+. ....++.. +. .........|.|.|||.+.++.+....... ..
T Consensus 110 ~R~~~~~~~~~~~-~~~-~~~~i~~~----------------~p-~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~ 170 (347)
T 3das_A 110 VRMLYDEKKPSGE-QLG-APDTVFRG----------------IP-KGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRK 170 (347)
T ss_dssp EEEEBCTTSCTTC-CBC-CCEEEEEE----------------EC-CCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTT
T ss_pred EEEEeCCCCcccc-cCC-CcEEEEEc----------------CC-CCCCccCccccCCCCCCEEEEECCCCCCccccCCC
Confidence 5565554221000 000 00000000 00 011123457999999976665433221100 01
Q ss_pred cccceEEEEeccCCC---ccc----ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCC
Q 010051 247 ESINSAYIFSRKDLS---RPA----LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESV 319 (519)
Q Consensus 247 ~~~~~i~i~~~~~~~---~~~----~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~ 319 (519)
...+.|.-++....- .+. ....+|. ....++|+|+|..+++-...... ..|-.. ..|.-+=|-...+
T Consensus 171 ~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~----deln~i-~~G~nyGwP~~~g 244 (347)
T 3das_A 171 SLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTW----DELNAI-KPGDNYGWPEAEG 244 (347)
T ss_dssp CSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSC----EEEEEE-CTTCBCCTTTCCS
T ss_pred CCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCC----ceeeEE-cCCCEecCCcccC
Confidence 122455555543210 000 1112332 24568888877544332211000 000000 0011111111111
Q ss_pred --------CceEEEeccccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCcc-cc-eeeecCCcccccCCCCcccccCC
Q 010051 320 --------PPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDEL-GI-PISLSGNKVSKDENKSPLVTKSE 389 (519)
Q Consensus 320 --------~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~s~~ 389 (519)
.++..+.. +......|+|. +|.+++..-..+.|....+..... .. ...+.+ ....+..++..||
T Consensus 245 ~~~~~~~~~P~~~~~~-~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~----~~gR~~dv~~~pD 318 (347)
T 3das_A 245 KGGGSGFHDPVAQWST-DEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEG----EYGRLRTVAPAGG 318 (347)
T ss_dssp SCCCTTCCCCSEEECT-TTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTT----TSSCEEEEEEEET
T ss_pred CCCCccccCCcEecCC-CCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecC----CCCCccEEEECCC
Confidence 12333332 22356677776 466666555566777777765432 11 111111 1246777888888
Q ss_pred ccEEEeec
Q 010051 390 DMIIEAST 397 (519)
Q Consensus 390 ~~~l~~~~ 397 (519)
|.++++..
T Consensus 319 G~lyv~td 326 (347)
T 3das_A 319 DKLWLVTS 326 (347)
T ss_dssp TEEEEEEC
T ss_pred CcEEEEEc
Confidence 87665544
No 326
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.49 E-value=0.73 Score=45.16 Aligned_cols=158 Identities=14% Similarity=0.035 Sum_probs=87.9
Q ss_pred cCCCCCEEEEEEecCCCEEEEEc-CCCcEEEEEecCCccccccccccccccccccCcceeEEEEccCCCeEEEEEcccCC
Q 010051 10 WHDTKPVLTLDFHPISGLLATGG-ADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTE 88 (519)
Q Consensus 10 ~~h~~~V~~~~~sp~~~~la~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~vw~~~~~~ 88 (519)
....+.+..|+|++.+..|..+. ..+.|..+++........+ +...-.....+++.+.++.|++-|...+.
T Consensus 36 ~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v--------~~~~~~~P~GlAvD~~~~~ly~~d~~~~~ 107 (619)
T 3s94_A 36 VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--------VVSGLLSPDGLACDWLGEKLYWTDSETNR 107 (619)
T ss_dssp CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE--------ECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE--------EeCCCCCcCeEEEEecCCEEEEEeCCCCE
Confidence 34455688999999777666544 4677888887654211111 11112356778887766555544432210
Q ss_pred ------CcccceeeeccccCCCCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeE
Q 010051 89 ------TGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSV--DNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYV 160 (519)
Q Consensus 89 ------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 160 (519)
.+.....+ +.........|++.|.+.+|+.... .+.|...++............-.....|++++++..|
T Consensus 108 I~v~~~dG~~~~~l--~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~L 185 (619)
T 3s94_A 108 IEVSNLDGSLRKVL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 185 (619)
T ss_dssp EEEEETTSCSCEEE--ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEE--EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEE
Confidence 00000111 1123345678999997666665543 4677777775433333333334567899999877766
Q ss_pred EEee-CCCeEEEEecCCC
Q 010051 161 ASLS-SDRTCRIYANRPT 177 (519)
Q Consensus 161 ~~~~-~dg~i~iwd~~~~ 177 (519)
+.+. ..+.|..+|+...
T Consensus 186 Y~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 186 YWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEEETTTCCEEEESSSCC
T ss_pred EEEeCCCCeEEEecCCCC
Confidence 6554 4567888888654
No 327
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.45 E-value=0.41 Score=41.80 Aligned_cols=200 Identities=12% Similarity=0.159 Sum_probs=116.5
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------CCeEEEEEcccCCCc
Q 010051 18 TLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------GGELIIWKLHTTETG 90 (519)
Q Consensus 18 ~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~i~vw~~~~~~~~ 90 (519)
+.-.+|..+.||.-. ..++.|+|+++.+.++... ....|..-.|-.+ +..|+-|++......
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~----------~~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P 139 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT----------MTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQP 139 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE----------CSSCEEEEEECSSSEEEEEESSEEEEEESSTTCCC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhccee----------cCCccEEEEecCCCeEEEEcCCcEEEEcccCCCCC
Confidence 344688888888665 5789999999988776543 2345555555544 588999999753221
Q ss_pred -ccceeeeccccCCCCeEEEEEcCCCCEEEEEe-------CCCeEEEEEcCCCceEEEecccccCeEEEEEcCC---CCe
Q 010051 91 -QAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGS-------VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPL---SKY 159 (519)
Q Consensus 91 -~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~ 159 (519)
+.+.....+. ...|..-..+++.++++..+ -.|.+.+|..+.+ ..+.+.+|.+....+.+..+ .+.
T Consensus 140 ~kvFdR~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~l 216 (365)
T 2xzh_A 140 VKMFDRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTL 216 (365)
T ss_dssp EEEEECCGGGT--TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEE
T ss_pred ceeeecchhcc--cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceE
Confidence 1112222232 46677888889999877543 2478999998655 45678888655433333211 123
Q ss_pred EEEeeC---CCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEe
Q 010051 160 VASLSS---DRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVP 236 (519)
Q Consensus 160 l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~ 236 (519)
|+.+.. .+.+++.++..... ....+.......+ +.........-++..|+.-..++..
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~-~~~~f~kk~vdi~------------------fppea~~DFPVamqvs~kygviyvi 277 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPT-GNQPFPKKAVDVF------------------FPPEAQNDFPVAMQISEKHDVVFLI 277 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCT-TCCCCCCEEEEEC------------------CCTTCTTCCEEEEEEETTTTEEEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCCC-CCCCcccccceee------------------CCccccCCceEEEEecccCCEEEEE
Confidence 333332 25788888854310 0111111111111 1111223445577777776666665
Q ss_pred cCCcceeeeecccceEEEEeccCC
Q 010051 237 AGSYKISSMSESINSAYIFSRKDL 260 (519)
Q Consensus 237 ~~~~~~~~~~~~~~~i~i~~~~~~ 260 (519)
+.. |-+++||+.+.
T Consensus 278 TK~----------G~ihlyDleTg 291 (365)
T 2xzh_A 278 TKY----------GYIHLYDLETG 291 (365)
T ss_dssp ETT----------SEEEEEETTTC
T ss_pred eCC----------cEEEEEEcccC
Confidence 554 79999999764
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.44 E-value=0.52 Score=42.94 Aligned_cols=237 Identities=10% Similarity=0.086 Sum_probs=137.4
Q ss_pred cCCCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEE
Q 010051 74 PCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAW 153 (519)
Q Consensus 74 ~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 153 (519)
.++..|.|.|+..+... .+. .-..-+.-.+|..+.||.-. ..++.++|+++...+..+.-. ..|.--.|
T Consensus 45 ~~~~~vvIiDl~~~~~~-----~rr----pi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkW 113 (494)
T 1bpo_A 45 GEQAQVVIIDMNDPSNP-----IRR----PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKW 113 (494)
T ss_dssp TTCCEEEEEETTSTTSC-----EEE----ECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEE
T ss_pred CCCCeEEEEECCCCCcc-----eec----ccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEe
Confidence 34568889999876421 111 11123455678777777654 689999999999888777654 45656666
Q ss_pred cCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeE
Q 010051 154 DPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFL 233 (519)
Q Consensus 154 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l 233 (519)
-.+ +.|+-.+ +..|..|++.... .+...+..... --...|.....+++.+|+
T Consensus 114 is~-~~l~lVT-~taVyHWsi~~~s---------~P~kvFdR~~~-----------------L~~~QIInY~~d~~~kW~ 165 (494)
T 1bpo_A 114 ISL-NTVALVT-DNAVYHWSMEGES---------QPVKMFDRHSS-----------------LAGCQIINYRTDAKQKWL 165 (494)
T ss_dssp EET-TEEEEEC-SSEEEEEESSSSC---------CCEEEEECCGG-----------------GTTCEEEEEEECTTSSEE
T ss_pred cCC-CeEEEEc-CCeeEEecccCCC---------Cchhheecchh-----------------cccceEEEEEECCCCCeE
Confidence 533 3343333 5689999986522 11122211110 013557788889999998
Q ss_pred EEecCCcceeeeecccceEEEEeccCCCcccccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEE-Eec---CC
Q 010051 234 LVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFA-IAT---LN 309 (519)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~-~~~---d~ 309 (519)
+..+-...- +...|.+.+|.... +....+.+|......+.+.-+..- ..+++ +.. .+
T Consensus 166 ~l~GI~~~~---~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~--------------~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 166 LLTGISAQQ---NRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEE--------------STLFCFAVRGQAGG 226 (494)
T ss_dssp EEEEEEEET---TEEEEEEEEEESTT--CCEEEECCSEEEEEEEECTTCSSE--------------EEEEEEEECSTTCC
T ss_pred EEEeecccC---CcccceEEEeeccc--cccchheeeeeeeEEEecCCCCCC--------------ceEEEEEEecCCCc
Confidence 875521000 11237899999864 334556777655544443221100 11333 222 27
Q ss_pred eEEEEeCCCC---Cc---eEEE--e-c--cccccEEEEEEcCCCCEEEEEeCCCcEEEEEecCCccccee
Q 010051 310 SLYIYDTESV---PP---IAIL--A-G--LHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPI 368 (519)
Q Consensus 310 ~i~vwd~~~~---~~---~~~~--~-~--~~~~~i~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~ 368 (519)
.++|.++... .. .... . . .-..---++..|+.-..+..-+.-|.|.+||++++.....-
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeee
Confidence 8999998543 11 1111 1 0 01223456778888788888899999999999998654333
No 329
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.23 E-value=0.38 Score=39.27 Aligned_cols=187 Identities=10% Similarity=0.074 Sum_probs=95.7
Q ss_pred CCEEEEEeCCCeEEEEEcCCCc------eEEEecc-cccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccc
Q 010051 115 GAFLLSGSVDNSCIIWDVNKGS------VLQILDA-HFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNY 187 (519)
Q Consensus 115 ~~~l~~~~~dg~i~vwd~~~~~------~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 187 (519)
..+|+....| +++.=...++. ....+-. -=..+..++|+|++.+.++ .+|.+.-.+..+.....-...
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-- 78 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-- 78 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH--
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc--
Confidence 3456666666 66655554443 1122211 1236779999998886655 678766655443221110000
Q ss_pred eeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCccccc-
Q 010051 188 VCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQ- 266 (519)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~- 266 (519)
...+ -.... .....+.|.|+|.+.++ .+ +.|+-++..+.....-.
T Consensus 79 --~t~I-------------------G~~Gw-~~F~a~~fD~~G~LYav--~d----------G~iyr~~pP~~~~~~Wl~ 124 (236)
T 1tl2_A 79 --AKKI-------------------GNGGW-NQFQFLFFDPNGYLYAV--SK----------DKLYKASPPQSDTDNWIA 124 (236)
T ss_dssp --CEEE-------------------ECSCG-GGCSEEEECTTSCEEEE--ET----------TEEEEESCCCSTTCCHHH
T ss_pred --ccEe-------------------ccccc-ccceEEEECCCCCEEEe--CC----------CEEEEeCCCcCCCCceec
Confidence 0000 00011 11458999999998887 22 46666654322211100
Q ss_pred ----C-CCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCC------ceEEEeccccccEEE
Q 010051 267 ----L-PGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVP------PIAILAGLHYAAITD 335 (519)
Q Consensus 267 ----~-~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~------~~~~~~~~~~~~i~~ 335 (519)
+ ..-=..+..+.|.|+|. |.+.. ++.++-....+.. ....+....-...+.
T Consensus 125 ~a~~vg~~gw~~~~~lff~p~G~-----------------Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~ 186 (236)
T 1tl2_A 125 RATEVGSGGWSGFKFLFFHPNGY-----------------LYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKF 186 (236)
T ss_dssp HSEEEECSSGGGEEEEEECTTSC-----------------EEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEE
T ss_pred cccEeccCCCCceEEEEECCCce-----------------EEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEE
Confidence 0 00113578899999983 44555 7776544333221 111222113334566
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEecCC
Q 010051 336 IAWSNNARYLALSSQDGYCTLVEFEND 362 (519)
Q Consensus 336 ~~~s~~g~~l~~~~~dg~i~vwd~~~~ 362 (519)
+.|+++|.++++. +| ++|.....
T Consensus 187 l~f~~~G~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 187 LFFSSVGTLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp EEECTTSCEEEEE--TT--EEEEESCC
T ss_pred EEECCCCcEEEEe--CC--eEEecCCc
Confidence 7899999877776 66 55555443
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.18 E-value=1.3 Score=44.84 Aligned_cols=196 Identities=10% Similarity=0.031 Sum_probs=103.9
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccc
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVE 183 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 183 (519)
..|.++....+| .|..|+.+| +..||..+.+...........|.++... ++ .|..++.+ -|..+|..+.+.....
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLTSFD 137 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEEEEC
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEEEec
Confidence 457777776665 566677665 7899987764322111122357766543 44 46556655 5778887654321100
Q ss_pred cccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCcc
Q 010051 184 KMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRP 263 (519)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~ 263 (519)
.. ........|.++....+|...+.+ .. .+..|+.......
T Consensus 138 ~~---------------------------~~~l~~~~i~~i~~d~~g~lWigt-~~-----------Gl~~~~~~~~~~~ 178 (758)
T 3ott_A 138 TR---------------------------RNGLPNNTIYSIIRTKDNQIYVGT-YN-----------GLCRYIPSNGKFE 178 (758)
T ss_dssp HH---------------------------HHCCSCSCEEEEEECTTCCEEEEE-TT-----------EEEEEETTTTEEE
T ss_pred cC---------------------------CCCcCCCeEEEEEEcCCCCEEEEe-CC-----------CHhhCccCCCceE
Confidence 00 000012346677777777766643 22 3445554322110
Q ss_pred cccCCC----CCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEc
Q 010051 264 ALQLPG----ASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWS 339 (519)
Q Consensus 264 ~~~~~~----~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s 339 (519)
...... ....|.++...+++ +.+..++. +-|..+|..+++... +.......|.++...
T Consensus 179 ~~~~~~~~~~~~~~i~~i~~d~~~----------------~~lWigt~-~Gl~~~~~~~~~~~~-~~~l~~~~i~~i~~d 240 (758)
T 3ott_A 179 GIPLPVHSSQSNLFVNSLLEDTTR----------------QCVWIGTE-GYLFQYFPSTGQIKQ-TEAFHNNSIKSLALD 240 (758)
T ss_dssp EECCCCCTTCSSCCEEEEEEETTT----------------TEEEEEEE-EEEEEEETTTTEEEE-EEEEEEEEEEEEEEC
T ss_pred EecCCCccccccceeEEEEEECCC----------------CEEEEEEC-CCCeEEcCCCCeEEe-ccCCCCCeEEEEEEc
Confidence 001111 12246777666554 22333443 458888987665332 221134568899988
Q ss_pred CCCCEEEEEeCCCcEEEEEecCCc
Q 010051 340 NNARYLALSSQDGYCTLVEFENDE 363 (519)
Q Consensus 340 ~~g~~l~~~~~dg~i~vwd~~~~~ 363 (519)
.+|.+.+. +. +-+.+++..+..
T Consensus 241 ~~g~lWig-T~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 241 GNGDLLAG-TD-NGLYVYHNDTTP 262 (758)
T ss_dssp TTCCEEEE-ET-TEEEEECCTTSC
T ss_pred CCCCEEEE-eC-CceeEEecCCCc
Confidence 88876654 44 457778776554
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.11 E-value=0.23 Score=43.59 Aligned_cols=53 Identities=9% Similarity=0.064 Sum_probs=30.0
Q ss_pred CeEEEEeCCCCCceEE--EeccccccEEEEEEcCCCCEEEEEeCC-----CcEEEEEecCCcc
Q 010051 309 NSLYIYDTESVPPIAI--LAGLHYAAITDIAWSNNARYLALSSQD-----GYCTLVEFENDEL 364 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~vwd~~~~~~ 364 (519)
..+.+||+.+.+-... +.. .......+.+ ++++++.|+.+ ..+.+||+.+...
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMST-RRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred cEEEEEeCCCCcEEECCCCcc-ccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 4588999887643222 111 1111122222 67788887765 3688888877644
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.01 E-value=0.72 Score=40.47 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=49.6
Q ss_pred CeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCceEEE--ecccccCe
Q 010051 77 GELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD------NSCIIWDVNKGSVLQI--LDAHFHYV 148 (519)
Q Consensus 77 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vwd~~~~~~~~~--~~~h~~~v 148 (519)
..+.+||+.+. .|..+..+.........+.+ +++.++.|+.+ ..+.+||+.+.+.... +.......
T Consensus 70 ~~~~~~d~~~~----~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 143 (306)
T 3ii7_A 70 KRMDCYNVVKD----SWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH 143 (306)
T ss_dssp CEEEEEETTTT----EEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred ceEEEEeCCCC----eEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee
Confidence 45667776544 33444443322222233333 56777777765 4689999988764332 11111111
Q ss_pred EEEEEcCCCCeEEEeeC---------CCeEEEEecCCCC
Q 010051 149 QGVAWDPLSKYVASLSS---------DRTCRIYANRPTK 178 (519)
Q Consensus 149 ~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~ 178 (519)
..+.+ +++.++.|+. -..+.+||+.+.+
T Consensus 144 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 144 GMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred EEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 22222 4566666654 2347788887654
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.91 E-value=0.64 Score=41.93 Aligned_cols=61 Identities=11% Similarity=-0.036 Sum_probs=29.4
Q ss_pred eEEEEeCCCCCc--eEEEeccccccEEEEEEcCCCCEEEEEeCCC------cEEEEEecCCcccceeeecCC
Q 010051 310 SLYIYDTESVPP--IAILAGLHYAAITDIAWSNNARYLALSSQDG------YCTLVEFENDELGIPISLSGN 373 (519)
Q Consensus 310 ~i~vwd~~~~~~--~~~~~~~~~~~i~~~~~s~~g~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~ 373 (519)
.+.+||+.+.+- +..+.. ....-.+ ...++++++.|+.++ .|.++++++++.......++|
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~-~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~ 354 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQ-GRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEHHH 354 (357)
T ss_dssp CCEEEECC---CEEEEECSS-CCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-----
T ss_pred eEEEEecCCCceeeCCCCCC-Cccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccccc
Confidence 577899886543 222222 1111122 234778888888653 355668887766555554443
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.86 E-value=0.26 Score=43.41 Aligned_cols=53 Identities=15% Similarity=0.016 Sum_probs=29.9
Q ss_pred CeEEEEeCCCCCceEE--EeccccccEEEEEEcCCCCEEEEEeCC-----CcEEEEEecCCcc
Q 010051 309 NSLYIYDTESVPPIAI--LAGLHYAAITDIAWSNNARYLALSSQD-----GYCTLVEFENDEL 364 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~s~~g~~l~~~~~d-----g~i~vwd~~~~~~ 364 (519)
..+.+||+.+.+-... +.. .......+.+ ++++++.|+.+ ..+.+||+.+...
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNT-IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCeEeeCCCCCC-ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 4688999876542211 111 1111122233 67777777765 4588899887644
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.70 E-value=0.98 Score=39.53 Aligned_cols=64 Identities=9% Similarity=0.104 Sum_probs=39.6
Q ss_pred EEEcCCCCEEEEEe----CCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeC-CCeEEEEecCCC
Q 010051 109 LQWSTDGAFLLSGS----VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSS-DRTCRIYANRPT 177 (519)
Q Consensus 109 ~~~s~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~ 177 (519)
..|++++++|+-.. ....|+.-++.... ...+..+.. ..|+++++.|+-.+. ...|...++...
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 36778899888775 24456666665433 344444422 345677888876654 566777776654
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.68 E-value=0.99 Score=47.96 Aligned_cols=142 Identities=13% Similarity=0.181 Sum_probs=87.3
Q ss_pred EEEecCCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCcceeEEEEccC-------CCeEEEEEcccCCCcc
Q 010051 19 LDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPC-------GGELIIWKLHTTETGQ 91 (519)
Q Consensus 19 ~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~i~vw~~~~~~~~~ 91 (519)
.-.+|..+.||.-. ..++.|||+++...++... ....|..-.|-.. +..|..|++....
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~----------~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s--- 136 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT----------MTDDVTFWKWISLNTVALVTDNAVYHWSMEGES--- 136 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccc----------cCCCceEEEecCCCeeEEEcCCeEEEeccCCCC---
Confidence 34577777777654 6789999999888766543 2334555555443 5889999996532
Q ss_pred cceeeeccccC----CCCeEEEEEcCCCCEEEEEe-------CCCeEEEEEcCCCceEEEecccccCeEEEEEc--CC-C
Q 010051 92 AWKVLKNLSFH----RKDVLDLQWSTDGAFLLSGS-------VDNSCIIWDVNKGSVLQILDAHFHYVQGVAWD--PL-S 157 (519)
Q Consensus 92 ~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~ 157 (519)
.+.+.+..| ...|..-..+++.++++..| -.|.+.+|.++.+. .+.+.+|.+....+... +. .
T Consensus 137 --~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~ 213 (1630)
T 1xi4_A 137 --QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEES 213 (1630)
T ss_pred --ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCc
Confidence 222222222 45677778888998877543 35889999986553 45667776655444442 11 2
Q ss_pred CeEEEeeC---CCeEEEEecCCC
Q 010051 158 KYVASLSS---DRTCRIYANRPT 177 (519)
Q Consensus 158 ~~l~~~~~---dg~i~iwd~~~~ 177 (519)
+.|..+.. .+.++|.++...
T Consensus 214 ~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 214 TLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred eEEEEEEecCCCceEEEEecCCC
Confidence 23332222 267888887543
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.57 E-value=0.45 Score=44.53 Aligned_cols=53 Identities=19% Similarity=0.319 Sum_probs=30.8
Q ss_pred eeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc-ccccCC------CCCCCeEEEEEcCC
Q 010051 220 FFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-PALQLP------GASKPVVAVRFCPL 282 (519)
Q Consensus 220 ~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-~~~~~~------~~~~~v~~~~~sp~ 282 (519)
....|+|.|+|+.+++-... +.|++++..+... .+..+. ........|+|+|+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~g----------g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERAT----------GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SEEEEEECTTSCEEEEETTT----------CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCC----------CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 35689999999977764433 2455554322111 111111 13456789999996
No 338
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.42 E-value=1.4 Score=39.65 Aligned_cols=65 Identities=9% Similarity=0.122 Sum_probs=35.6
Q ss_pred CeEEEEEcccC--CCcccceeeeccccCCCCeEEEEEc---CC----CCEEEEEe-CCCeEEEEEcCCCceEEEe
Q 010051 77 GELIIWKLHTT--ETGQAWKVLKNLSFHRKDVLDLQWS---TD----GAFLLSGS-VDNSCIIWDVNKGSVLQIL 141 (519)
Q Consensus 77 ~~i~vw~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s---~~----~~~l~~~~-~dg~i~vwd~~~~~~~~~~ 141 (519)
-+|.+||+.+. +..+.+..........+.+..+.+. |+ +.+++.+. ..+-|.|+|+.+++.-+.+
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 35667777665 3322222222222234557777776 22 33444443 3567999999888776655
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.23 E-value=0.75 Score=37.59 Aligned_cols=66 Identities=12% Similarity=-0.044 Sum_probs=43.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceE------EEec--ccccCeEEEEEcCCCCeEEEeeCCCeEEEEecC
Q 010051 105 DVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVL------QILD--AHFHYVQGVAWDPLSKYVASLSSDRTCRIYANR 175 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~------~~~~--~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 175 (519)
.+..++|+|+|.+.++ .+|.++-.+..++... ..+- +-. .-.++.|.|+|.+.++ .||.|.-++..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 5679999998885555 7788777776553221 1110 111 1478899999987777 56988777653
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.09 E-value=1.6 Score=38.41 Aligned_cols=66 Identities=12% Similarity=0.050 Sum_probs=35.8
Q ss_pred EcCCCCEEEEEeC----CC-------eEEEEEcCCCceEEE--ecccccCeEEEEEcCCCCeEEEeeCC-------CeEE
Q 010051 111 WSTDGAFLLSGSV----DN-------SCIIWDVNKGSVLQI--LDAHFHYVQGVAWDPLSKYVASLSSD-------RTCR 170 (519)
Q Consensus 111 ~s~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~d-------g~i~ 170 (519)
...++..++.|+. ++ .+.+||..+++.... +.........+.+ ++..++.|+.+ ..+.
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 3456777777773 12 278889887764332 1111111122222 46666777754 2477
Q ss_pred EEecCCCC
Q 010051 171 IYANRPTK 178 (519)
Q Consensus 171 iwd~~~~~ 178 (519)
+||+.+.+
T Consensus 131 ~yd~~~~~ 138 (318)
T 2woz_A 131 CYDPVAAK 138 (318)
T ss_dssp EEETTTTE
T ss_pred EEeCCCCC
Confidence 78877654
No 341
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.01 E-value=2.3 Score=39.76 Aligned_cols=69 Identities=12% Similarity=-0.003 Sum_probs=39.2
Q ss_pred CCEEEEEEecCCC-EEEEEcCCCcEEEEEecCCcccccccccccccccc-----ccCcceeEEEEccC---CCeEEEEEc
Q 010051 14 KPVLTLDFHPISG-LLATGGADYDIKIWLINSGEKQKKIPTASYQNSLS-----YHGSAINILRFSPC---GGELIIWKL 84 (519)
Q Consensus 14 ~~V~~~~~sp~~~-~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~i~vw~~ 84 (519)
..-+.|+|.|||. .|+++...|.|++++.........+.. ....+. ........|+|.|+ ++.|+|...
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~--~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLD--IHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEE--CTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecC--CcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 4578999999996 454556789999996432211111100 000010 12355677888876 677777644
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.59 E-value=2.2 Score=37.51 Aligned_cols=59 Identities=5% Similarity=0.009 Sum_probs=32.7
Q ss_pred EEEEeCCCeEEEEEcCCCceEE-EecccccCeEEEEEcCCCCeEEEeeC----C-------CeEEEEecCCCC
Q 010051 118 LLSGSVDNSCIIWDVNKGSVLQ-ILDAHFHYVQGVAWDPLSKYVASLSS----D-------RTCRIYANRPTK 178 (519)
Q Consensus 118 l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~----d-------g~i~iwd~~~~~ 178 (519)
++.|+ ..+.+||..+++... .+..............++..++.|+. + ..+.+||+.+.+
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 78 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE 78 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe
Confidence 44454 579999998887543 12111122222233456777777773 1 126677877654
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.43 E-value=2 Score=42.91 Aligned_cols=66 Identities=5% Similarity=-0.008 Sum_probs=37.8
Q ss_pred CCCCEEEEEeCC----CeEEEEEcCCCceEEEe-c-------ccccCeEEEEEcCCCCeEEEeeCCC------eEEEEec
Q 010051 113 TDGAFLLSGSVD----NSCIIWDVNKGSVLQIL-D-------AHFHYVQGVAWDPLSKYVASLSSDR------TCRIYAN 174 (519)
Q Consensus 113 ~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~-~-------~h~~~v~~~~~~~~~~~l~~~~~dg------~i~iwd~ 174 (519)
.++..++.|+.+ ..+.+||..+++....- . .....-..+.+..+++.++.|+.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46889998887654322 1 1111223333322677777777543 4677777
Q ss_pred CCCC
Q 010051 175 RPTK 178 (519)
Q Consensus 175 ~~~~ 178 (519)
.+.+
T Consensus 476 ~t~~ 479 (695)
T 2zwa_A 476 KTRE 479 (695)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 7654
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.33 E-value=1.8 Score=40.90 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=77.7
Q ss_pred cceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCc-----------ccccCCCCCCCeEEEEEcCCcccc
Q 010051 218 PSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSR-----------PALQLPGASKPVVAVRFCPLAFNL 286 (519)
Q Consensus 218 ~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-----------~~~~~~~~~~~v~~~~~sp~~~~l 286 (519)
+.....+.++|||+++++++.-. ..+.+++...... .+..-..-.......+|.++|
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLs---------ptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G--- 389 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLS---------PTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG--- 389 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTS---------SBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS---
T ss_pred CCCCcceeeCCCCCEEEEcCCCC---------CeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC---
Confidence 34455799999999999976543 6888898863211 111111223456778899887
Q ss_pred cccCCCCcccccceEEEEEecCCeEEEEeCCCC----------CceEEEeccccccEEEE-----EEcCCCCEEEEEe--
Q 010051 287 RESNSAGFFKLPYRLIFAIATLNSLYIYDTESV----------PPIAILAGLHYAAITDI-----AWSNNARYLALSS-- 349 (519)
Q Consensus 287 ~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~----------~~~~~~~~~~~~~i~~~-----~~s~~g~~l~~~~-- 349 (519)
+-..+.--|..|..|++... ..+..+.- |-.+-... .-.++|++|++..
T Consensus 390 -------------~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv-~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 390 -------------NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDV-HYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp -------------EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEEC-SSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred -------------ceEeeeeecceEEEEeccHHHHHhcCccCCeeeecccc-ccCCcccccCCCccCCCCccEEEEeccc
Confidence 33455556889999998743 34444444 44332222 2367999999975
Q ss_pred -CCCcE----------EEEEecCCcccceee
Q 010051 350 -QDGYC----------TLVEFENDELGIPIS 369 (519)
Q Consensus 350 -~dg~i----------~vwd~~~~~~~~~~~ 369 (519)
.|..+ .+.|+...++.....
T Consensus 456 skdrfl~vGpl~pen~QlidIsGdkM~lv~D 486 (638)
T 3sbq_A 456 SKDRFLPVGPLHPENDQLIDISGDEMKLVHD 486 (638)
T ss_dssp CTTSSCCCSSSCCEEEEEEECSSSSCEEEEE
T ss_pred ccccCcCCCCCCCCcceeEecCCCceEEEec
Confidence 45433 777887665544433
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.79 E-value=4.7 Score=35.43 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=46.6
Q ss_pred EEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCC-------CeEEEEEcCCCceEEE--ecccccCeE
Q 010051 79 LIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVD-------NSCIIWDVNKGSVLQI--LDAHFHYVQ 149 (519)
Q Consensus 79 i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~ 149 (519)
+.+||..+. .|..+..+.........+.+ ++..++.|+.+ ..+.+||+.+.+.... +........
T Consensus 80 ~~~~d~~~~----~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 153 (318)
T 2woz_A 80 FFQLDNVSS----EWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHN 153 (318)
T ss_dssp EEEEETTTT----EEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCE
T ss_pred EEEEeCCCC----cEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccE
Confidence 566666543 33333333322222223333 56677777754 3588899887764432 111111112
Q ss_pred EEEEcCCCCeEEEeeCC------CeEEEEecCCCC
Q 010051 150 GVAWDPLSKYVASLSSD------RTCRIYANRPTK 178 (519)
Q Consensus 150 ~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~ 178 (519)
.+. .+++.++.|+.+ ..+.+||+.+.+
T Consensus 154 ~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 154 VIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 222 356666666642 357888887754
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.32 E-value=3.4 Score=41.17 Aligned_cols=148 Identities=14% Similarity=0.142 Sum_probs=72.7
Q ss_pred CCCEEEEEcCCC------cEEEEEecCCccccc--cccccccccccc-cCcceeEEEEccC--CCeEEEEEcccCCCccc
Q 010051 24 ISGLLATGGADY------DIKIWLINSGEKQKK--IPTASYQNSLSY-HGSAINILRFSPC--GGELIIWKLHTTETGQA 92 (519)
Q Consensus 24 ~~~~la~~~~dg------~i~iwd~~~~~~~~~--~~~~~~~~~~~~-~~~~v~~~~~~~~--~~~i~vw~~~~~~~~~~ 92 (519)
++.+++.|+.++ .+.+||..+..-... ++.......... +.+.+ ..|... ++.+.+||+.+. .
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~i--yv~GG~~~~~~v~~yd~~t~----~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNV--LILGGVTEGPAMLLYNVTEE----I 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCE--EEECCBCSSCSEEEEETTTT----E
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEE--EEECCCCCCCCEEEEECCCC----c
Confidence 677777877532 477888877543321 111111111111 11211 112111 126778887654 3
Q ss_pred ceeeec---cccCCCCeEEEEEcCC-CCEEEEEeC--C-----CeEEEEEcCCCc------eEEEec---ccccCeEEEE
Q 010051 93 WKVLKN---LSFHRKDVLDLQWSTD-GAFLLSGSV--D-----NSCIIWDVNKGS------VLQILD---AHFHYVQGVA 152 (519)
Q Consensus 93 ~~~~~~---~~~~~~~v~~~~~s~~-~~~l~~~~~--d-----g~i~vwd~~~~~------~~~~~~---~h~~~v~~~~ 152 (519)
|..+.. +........++.+..+ ++.++.|+. + ..+.+||+.+.. ...... ........+
T Consensus 525 W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~- 603 (695)
T 2zwa_A 525 FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK- 603 (695)
T ss_dssp EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-
T ss_pred eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-
Confidence 444432 2222233344555555 667777765 2 468999998876 221111 111122222
Q ss_pred EcCCCCeEEEeeCC--------CeEEEEecCCCC
Q 010051 153 WDPLSKYVASLSSD--------RTCRIYANRPTK 178 (519)
Q Consensus 153 ~~~~~~~l~~~~~d--------g~i~iwd~~~~~ 178 (519)
...+++.++.|+.+ ..+.+||+.+.+
T Consensus 604 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 604 YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 33336677777743 458888887764
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.28 E-value=0.84 Score=40.51 Aligned_cols=145 Identities=9% Similarity=0.065 Sum_probs=79.1
Q ss_pred CEEEEEcCCCcEEEEEecCCccccccccc--cccccccccCc--ceeEEEEcc-CCCeEEEEEcccCCCccccee-eecc
Q 010051 26 GLLATGGADYDIKIWLINSGEKQKKIPTA--SYQNSLSYHGS--AINILRFSP-CGGELIIWKLHTTETGQAWKV-LKNL 99 (519)
Q Consensus 26 ~~la~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~--~v~~~~~~~-~~~~i~vw~~~~~~~~~~~~~-~~~~ 99 (519)
.++++++.||.|+-+|..+|+..-.+... ........... .-..+...| .+|.|..++..++.. .|.. +..+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~--~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ--KLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE--EEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE--Eeeeccccc
Confidence 46778888999999999888887776543 11111111110 012334454 689999998876521 1111 0111
Q ss_pred ccCCCCeEE---EEE-----cCCCCEEEEEeCCCeEEEEEcCCCceEEEeccccc-C------eEEEEEc-----CCCCe
Q 010051 100 SFHRKDVLD---LQW-----STDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFH-Y------VQGVAWD-----PLSKY 159 (519)
Q Consensus 100 ~~~~~~v~~---~~~-----s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-~------v~~~~~~-----~~~~~ 159 (519)
. ...++.. ... +..+..+++|+.+|.+...|+.+|+.+..+..... . ..|.... ..+..
T Consensus 89 v-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 89 V-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp H-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred e-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 1 2222221 000 01356789999999999999999999988754311 0 1111111 12356
Q ss_pred EEEeeCCCeEEEEe
Q 010051 160 VASLSSDRTCRIYA 173 (519)
Q Consensus 160 l~~~~~dg~i~iwd 173 (519)
++.+..+..+.+.+
T Consensus 168 v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 168 IVIGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEEEECEECC
T ss_pred EEEecceEEEEEEC
Confidence 66677666666665
No 348
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=91.93 E-value=11 Score=37.57 Aligned_cols=56 Identities=13% Similarity=0.140 Sum_probs=35.4
Q ss_pred cCCeEEEEeCCCCC-------ceEE-EeccccccEEEEEEcCCCCEEEEEeCCCc--EEEEEecCCc
Q 010051 307 TLNSLYIYDTESVP-------PIAI-LAGLHYAAITDIAWSNNARYLALSSQDGY--CTLVEFENDE 363 (519)
Q Consensus 307 ~d~~i~vwd~~~~~-------~~~~-~~~~~~~~i~~~~~s~~g~~l~~~~~dg~--i~vwd~~~~~ 363 (519)
..+.|.+.++.++. .... +.......+..+.|..+ .++++...++. |.++++.++.
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 35678889887631 2222 33214457888999876 57777777765 6666766553
No 349
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.45 E-value=28 Score=34.67 Aligned_cols=95 Identities=14% Similarity=-0.015 Sum_probs=51.3
Q ss_pred cceEEEEeccCCC------cccc--cCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCC--eEEEEeCCC
Q 010051 249 INSAYIFSRKDLS------RPAL--QLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLN--SLYIYDTES 318 (519)
Q Consensus 249 ~~~i~i~~~~~~~------~~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~--~i~vwd~~~ 318 (519)
.+.+..+++.... .... ........+..+.+..+ .++++...++ .|.++++.+
T Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------------~l~~~~~~~~~~~l~~~~~~~ 381 (711)
T 4hvt_A 319 AGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-----------------RVFLATYDNVVAKVVTFTLEN 381 (711)
T ss_dssp TTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-----------------CEEEEEEETTEEEEEEECEET
T ss_pred CCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-----------------EEEEEEEECCEEEEEEEECCC
Confidence 4678888876531 1111 22334456777788765 2355555554 577788766
Q ss_pred CC-ceEE-EeccccccEEEEEEcCCCCE-EEEEeCC---CcEEEEEec
Q 010051 319 VP-PIAI-LAGLHYAAITDIAWSNNARY-LALSSQD---GYCTLVEFE 360 (519)
Q Consensus 319 ~~-~~~~-~~~~~~~~i~~~~~s~~g~~-l~~~~~d---g~i~vwd~~ 360 (519)
+. .... +.....+.+..+.+++++.. +++.+.. +.+..+|+.
T Consensus 382 g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 382 EQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 64 2222 32211345777777777654 4443322 566776665
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.18 E-value=28 Score=36.17 Aligned_cols=38 Identities=11% Similarity=0.238 Sum_probs=33.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEe
Q 010051 104 KDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQIL 141 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 141 (519)
..+.+++..++..++++-+.|+++++|++.+++++...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35678888888899999999999999999999988765
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.04 E-value=4.1 Score=42.28 Aligned_cols=38 Identities=16% Similarity=0.322 Sum_probs=33.5
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCcccccc
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKI 51 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~ 51 (519)
..|.+++..++..+|++-+.|+++|||++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 46788888989999999999999999999999887654
No 352
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.90 E-value=49 Score=33.23 Aligned_cols=245 Identities=10% Similarity=0.040 Sum_probs=120.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEEecCCCCcccccc
Q 010051 105 DVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEK 184 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 184 (519)
.|.++...+++..|..|+. +-|..+|..+++...........|.++....++.+.+ |+.+ -+.+++..+.+......
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~ 268 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIH 268 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEc
Confidence 4888888777776666664 4588899877654322111234588888877776544 4444 47778776543211000
Q ss_pred ccceeeEEEeccCcccccCCccccceeeecCCCcceeeEEEEccCCCeEEEecCCcceeeeecccceEEEEeccCCCccc
Q 010051 185 MNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPA 264 (519)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 264 (519)
.. .. ...-....|.++....+|...+.+. .+ +... ........+....
T Consensus 269 ~~----------~~--------------~~~l~~~~i~~i~~D~~g~lWiGT~-~G-l~~~-~~~~~~~~~~~~~----- 316 (758)
T 3ott_A 269 DS----------RN--------------IQSLTNNIIWNIFADQEHNIWLGTD-YG-ISLS-RYNSALQFIPISQ----- 316 (758)
T ss_dssp CT----------TC--------------TTSCSCSCEEEEEECTTCCEEEEES-SS-EEEE-CCCC-CEEEEHHH-----
T ss_pred CC----------CC--------------cCcCCcCeEEEEEEcCCCCEEEEeC-Cc-cccc-ccCCceeEEeccc-----
Confidence 00 00 0001124477888777777655442 21 1110 0011111111100
Q ss_pred ccCCCCCCCeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCC--ceEEEec------cccccEEEE
Q 010051 265 LQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVP--PIAILAG------LHYAAITDI 336 (519)
Q Consensus 265 ~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~--~~~~~~~------~~~~~i~~~ 336 (519)
..-......|.++.-..+|. +..|+.+ -+..++..++. ....+.. .....|.++
T Consensus 317 ~~~~~~~~~v~~i~~D~~g~-----------------lWiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i 378 (758)
T 3ott_A 317 ITGTGDGNQFYSLFRDSKGF-----------------YWFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHI 378 (758)
T ss_dssp HSCSCCCCBEEEEEECTTCC-----------------EEEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEE
T ss_pred CCCCCCCceEEEEEEcCCCC-----------------EEEeeCC-cceeecccccccceeEEeccCCcCCCCCCCceEEE
Confidence 00011224577777666653 3334433 36666655432 1222211 012458899
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEecCCcccceeeecCCc-ccccCCCCcccccCCccEEEeecCCceeeec
Q 010051 337 AWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNK-VSKDENKSPLVTKSEDMIIEASTNDKLVTAE 405 (519)
Q Consensus 337 ~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~d~~i~~~ 405 (519)
.-..+|++.+ |+ ++-|..|+..++.... +...... ......+.++....+|.+.+....+++...+
T Consensus 379 ~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~ 445 (758)
T 3ott_A 379 YEDKEQQLWI-AT-DGSINRYDYATRQFIH-YNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVD 445 (758)
T ss_dssp EECTTSCEEE-EE-TTEEEEEETTTTEEEE-EEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEE
T ss_pred EECCCCCEEE-Ee-CCcHhhcCcCCCcEEE-eecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEc
Confidence 9888887655 44 4578888887664422 2111111 0112345566666666655544445555443
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.78 E-value=37 Score=31.69 Aligned_cols=53 Identities=13% Similarity=0.062 Sum_probs=35.6
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCc---eEEEec---------ccccCeEEEEEcCC
Q 010051 104 KDVLDLQWSTDGA-FLLSGSVDNSCIIWDVNKGS---VLQILD---------AHFHYVQGVAWDPL 156 (519)
Q Consensus 104 ~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~---~~~~~~---------~h~~~v~~~~~~~~ 156 (519)
...+.|+|.|||. .|+++...|.|++++..... .+..+. ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4568999999996 56667788999999754221 222221 11356789999996
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.22 E-value=27 Score=29.89 Aligned_cols=89 Identities=15% Similarity=0.146 Sum_probs=49.0
Q ss_pred CCeEEEEEcccCCCcccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecccccCeEEEEEcC
Q 010051 76 GGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDP 155 (519)
Q Consensus 76 ~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 155 (519)
++.|..|-........ ... .....|..++...+.. ++. . ||.|+.|-......+..-..-...|..++...
T Consensus 41 ~G~v~~wG~n~~Gqlg--~p~----~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~ 111 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLT--MPA----ATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA 111 (282)
T ss_dssp TTEEEEEECCSSSTTS--CCG----GGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEET
T ss_pred CCEEEEEeCCCCCCCC--CCc----cCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcC
Confidence 7999999865432111 000 1123577777654332 333 4 89999998654222111111124677777653
Q ss_pred CCCeEEEeeCCCeEEEEecCC
Q 010051 156 LSKYVASLSSDRTCRIYANRP 176 (519)
Q Consensus 156 ~~~~l~~~~~dg~i~iwd~~~ 176 (519)
...+... ||.|..|-...
T Consensus 112 --~hs~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 112 --WASYALK-DGKVIAWGDDS 129 (282)
T ss_dssp --TEEEEEE-TTEEEEEECCT
T ss_pred --CEEEEEe-CCeEEEecCCC
Confidence 3344445 99999997654
No 355
>2i32_E Histone regulatory homolog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens}
Probab=77.85 E-value=0.52 Score=27.72 Aligned_cols=16 Identities=38% Similarity=0.717 Sum_probs=11.7
Q ss_pred cCccccccccccccCC
Q 010051 504 QNKPAKRRITPMAIDP 519 (519)
Q Consensus 504 ~~~~~~~~~~p~~~~~ 519 (519)
+++-+||+++||+|.|
T Consensus 38 rt~dGKrritp~~I~p 53 (57)
T 2i32_E 38 RTADGRRRITPLCIAQ 53 (57)
T ss_dssp ECTTSCEEEECEEC--
T ss_pred cCCCCcccccceecCC
Confidence 3457899999999875
No 356
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=76.74 E-value=40 Score=29.87 Aligned_cols=21 Identities=5% Similarity=-0.190 Sum_probs=14.5
Q ss_pred CCCEEEEEcCC-CcEEEEEecC
Q 010051 24 ISGLLATGGAD-YDIKIWLINS 44 (519)
Q Consensus 24 ~~~~la~~~~d-g~i~iwd~~~ 44 (519)
++.+++.|+.+ ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~ 40 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQA 40 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTS
T ss_pred CCEEEEEeCcCCCeEEEEcccc
Confidence 67777777653 4688888864
No 357
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=76.08 E-value=6.2 Score=34.97 Aligned_cols=66 Identities=12% Similarity=0.074 Sum_probs=43.4
Q ss_pred eEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEE---EcCCCCEEEEE-eCCCcEEEEEecCCccc
Q 010051 300 RLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIA---WSNNARYLALS-SQDGYCTLVEFENDELG 365 (519)
Q Consensus 300 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~---~s~~g~~l~~~-~~dg~i~vwd~~~~~~~ 365 (519)
..++.++.||.|+-+|..+|+.+-.+......++.... ...++..++.. +.||.|..++..++...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 67899999999999999999998888762112222211 00122333333 57899999888776433
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=74.45 E-value=14 Score=35.74 Aligned_cols=72 Identities=14% Similarity=0.014 Sum_probs=44.1
Q ss_pred CeEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEE
Q 010051 273 PVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALS 348 (519)
Q Consensus 273 ~v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~ 348 (519)
..-.|+|+|.|..++.-..+..-. -.+.+...+.+.+.+..+++....+.+.....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~----~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNA----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCS----GGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCccc----ccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 346788888886444332211000 000001124566777778887777766456789999999999887765
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=74.14 E-value=11 Score=37.14 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=29.3
Q ss_pred CEEEEEEecCCCEEEEEcCCCcEEEEEecCCcccccccc
Q 010051 15 PVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPT 53 (519)
Q Consensus 15 ~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~~ 53 (519)
.|.|+.+ +..+|++-+.|+++|+|++.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4665555 477999999999999999999987766543
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.13 E-value=23 Score=33.85 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=30.9
Q ss_pred CeEEEEeCCCCCceEEEeccccccEEEEEEcCCCCEEEEEe
Q 010051 309 NSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSS 349 (519)
Q Consensus 309 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 349 (519)
+.++.++..+++....+.......++.++|+||++.|+++-
T Consensus 509 n~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 509 NQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 36777888788876666542346799999999999888764
No 361
>2z34_C Protein HIR1; histone chaperone, nucleosome disassmebly/assembly, chromatin regulation, chromatin regulator, coiled coil, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=68.70 E-value=1.2 Score=22.21 Aligned_cols=13 Identities=31% Similarity=0.672 Sum_probs=10.9
Q ss_pred Ccccccccccccc
Q 010051 505 NKPAKRRITPMAI 517 (519)
Q Consensus 505 ~~~~~~~~~p~~~ 517 (519)
.|.+|+|++|+.+
T Consensus 12 tK~GKKRVaP~Lv 24 (29)
T 2z34_C 12 TKEGKKRVAPQLL 24 (29)
T ss_dssp CTTSCEEECCEEE
T ss_pred eeCCceeecceee
Confidence 5789999999865
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.01 E-value=76 Score=28.57 Aligned_cols=157 Identities=8% Similarity=0.118 Sum_probs=90.3
Q ss_pred CCCEEEEEEecCCCEEE--EEcC-------------CCcEEEEEecCC--ccccccccccccccccccCcceeEEEEc--
Q 010051 13 TKPVLTLDFHPISGLLA--TGGA-------------DYDIKIWLINSG--EKQKKIPTASYQNSLSYHGSAINILRFS-- 73 (519)
Q Consensus 13 ~~~V~~~~~sp~~~~la--~~~~-------------dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 73 (519)
--.|..+...+++++-+ +|-. --.|.+||+.++ +.++++........ .....+.+++.
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~---~~S~l~di~VD~~ 162 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVE---KPTYFGGFAVDVA 162 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCC---CGGGEEEEEEEES
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcc---cCCccceEEEecc
Confidence 34688888888777433 2311 125889999999 88887765322211 12233444443
Q ss_pred -------------cC--CCeEEEEEcccCCCcccceeee-----------ccccC----CCCeEEEEEcCC----CCEEE
Q 010051 74 -------------PC--GGELIIWKLHTTETGQAWKVLK-----------NLSFH----RKDVLDLQWSTD----GAFLL 119 (519)
Q Consensus 74 -------------~~--~~~i~vw~~~~~~~~~~~~~~~-----------~~~~~----~~~v~~~~~s~~----~~~l~ 119 (519)
+| +..|.|+|+.++.. |+... .+.+. ...+..|+++|+ ++.|+
T Consensus 163 ~~~~~c~~~~aYItD~~~~gLIVydl~~~~s---wRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LY 239 (381)
T 3q6k_A 163 NPKGDCSETFVYITNFLRGALFIYDHKKQDS---WNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAY 239 (381)
T ss_dssp CTTTTSCSEEEEEEETTTTEEEEEETTTTEE---EEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEE
T ss_pred cCCCCCCccEEEEEcCCCCcEEEEECCCCcE---EEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEE
Confidence 22 46788888876632 22221 01111 257899999998 78888
Q ss_pred EEeCCCeEEEEEcCC-----C---ceEEEeccc--ccCeEEEEEc-CCCCeEEEeeCCCeEEEEecCC
Q 010051 120 SGSVDNSCIIWDVNK-----G---SVLQILDAH--FHYVQGVAWD-PLSKYVASLSSDRTCRIYANRP 176 (519)
Q Consensus 120 ~~~~dg~i~vwd~~~-----~---~~~~~~~~h--~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~ 176 (519)
.....+ -++|.+.+ . ..++.+-.. ...-..+++. .+|.++++--....|..|+..+
T Consensus 240 f~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 240 YLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 776654 23444322 1 122222111 1233456675 6777778778889999999875
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=63.20 E-value=28 Score=33.63 Aligned_cols=59 Identities=17% Similarity=0.184 Sum_probs=42.0
Q ss_pred CeEEEEEcCCCCEEEEEeCC------------CeEEEEEcCCCceEEEeccc-ccCeEEEEEcCCCCeEEEe
Q 010051 105 DVLDLQWSTDGAFLLSGSVD------------NSCIIWDVNKGSVLQILDAH-FHYVQGVAWDPLSKYVASL 163 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~ 163 (519)
..-.|+|+|.|.++++-..+ ..+.+.+..+++..+.+... ...++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45679999999855543221 35677777778776666554 3679999999999888765
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=62.83 E-value=20 Score=38.23 Aligned_cols=38 Identities=11% Similarity=0.254 Sum_probs=31.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEec
Q 010051 105 DVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILD 142 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 142 (519)
.+.+++..++..+|++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667788999999999999999999999887653
No 365
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.39 E-value=44 Score=31.99 Aligned_cols=61 Identities=15% Similarity=0.159 Sum_probs=43.2
Q ss_pred CCeEEEEEcCCCCEEEEEeC------------CCeEEEEEcCCCceEEEeccc-ccCeEEEEEcCCCCeEEEee
Q 010051 104 KDVLDLQWSTDGAFLLSGSV------------DNSCIIWDVNKGSVLQILDAH-FHYVQGVAWDPLSKYVASLS 164 (519)
Q Consensus 104 ~~v~~~~~s~~~~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~ 164 (519)
.....|.|.++|.+.++... ...|+.++..+++....+... ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999986663211 126777887788776655432 35689999999999887653
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.59 E-value=28 Score=34.33 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=29.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceEEEecc
Q 010051 105 DVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDA 143 (519)
Q Consensus 105 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 143 (519)
.|.++.+ +..+|++-+.|+++++|++.+++++....-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 377999999999999999999998876543
No 367
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.55 E-value=9.9 Score=40.45 Aligned_cols=39 Identities=15% Similarity=0.309 Sum_probs=32.7
Q ss_pred CCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccccc
Q 010051 14 KPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIP 52 (519)
Q Consensus 14 ~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~~~ 52 (519)
..+.+++..++..+|++-+.|+++|||++.+++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 456677778888999999999999999999998876543
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=43.89 E-value=1.7e+02 Score=25.69 Aligned_cols=161 Identities=11% Similarity=0.019 Sum_probs=85.4
Q ss_pred CCCCEEEEEEec---CCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCccee---------EEEEccCCCeE
Q 010051 12 DTKPVLTLDFHP---ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAIN---------ILRFSPCGGEL 79 (519)
Q Consensus 12 h~~~V~~~~~sp---~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~~~~~~i 79 (519)
....|.++..-+ +..++++++.+|.++--.+..-.....- ......+... +.+. .+.+..+.|.+
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~--G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~ 169 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSG--GIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQS 169 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSS--CEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEE
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccC--ceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeE
Confidence 345666665443 4679999999999999887653322110 0000111111 1111 23333345666
Q ss_pred EEEEcc--cCCC-cc--cceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-------ceEEEe--cccc
Q 010051 80 IIWKLH--TTET-GQ--AWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKG-------SVLQIL--DAHF 145 (519)
Q Consensus 80 ~vw~~~--~~~~-~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~--~~h~ 145 (519)
..+... .-.. +. .-...-.+. ....|.++...+++.+|+.++..|.++.-.+..- +-+..+ ....
T Consensus 170 ~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~ 248 (327)
T 3uc1_A 170 IRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRR 248 (327)
T ss_dssp EEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTT
T ss_pred EEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCC
Confidence 666555 2110 10 001112232 3456777777666778999999999988876431 112222 2212
Q ss_pred cCeEEEEEcCCCCeEEEeeCCCeEEEEecCC
Q 010051 146 HYVQGVAWDPLSKYVASLSSDRTCRIYANRP 176 (519)
Q Consensus 146 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 176 (519)
+.+..+....+...++..+.+|.+.-++...
T Consensus 249 d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 249 GRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred CeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 3455544444455677777888877776654
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=43.52 E-value=1.5e+02 Score=25.13 Aligned_cols=158 Identities=7% Similarity=-0.060 Sum_probs=84.1
Q ss_pred CCCCEEEEEEec--CCCEEEEEcCCCcEEEEEecCCccccccccccccccccccCccee---------EEEEccCCCeEE
Q 010051 12 DTKPVLTLDFHP--ISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAIN---------ILRFSPCGGELI 80 (519)
Q Consensus 12 h~~~V~~~~~sp--~~~~la~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~~~~~~i~ 80 (519)
....|.++.. + +..+++..+.+|.++-..+..-. ...- ......+.. .+.+. .+.+..+.|.+.
T Consensus 66 ~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~~--G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~ 140 (276)
T 3no0_A 66 REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-YKAQ--GMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVA 140 (276)
T ss_dssp TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-TCST--TEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEE
T ss_pred CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-hhcC--CeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEE
Confidence 4566777654 4 46789999999999999876532 1110 000011111 11111 233334456665
Q ss_pred EEEcccCCC-c--ccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-------CceEEEecccccCeEE
Q 010051 81 IWKLHTTET-G--QAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNK-------GSVLQILDAHFHYVQG 150 (519)
Q Consensus 81 vw~~~~~~~-~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~ 150 (519)
.+....-.. + ..-...-.+. ....|..+...+++..|+..+..|.++...+.. ++-+..+ ...+.+..
T Consensus 141 r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~ 218 (276)
T 3no0_A 141 RFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVD 218 (276)
T ss_dssp EEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEE
T ss_pred EEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEE
Confidence 555543211 0 0001112233 235566666556677888999999999888743 2223333 23344555
Q ss_pred EEEcCCCCeEEEeeCCCeEEE--EecCC
Q 010051 151 VAWDPLSKYVASLSSDRTCRI--YANRP 176 (519)
Q Consensus 151 ~~~~~~~~~l~~~~~dg~i~i--wd~~~ 176 (519)
+........++..+.+|.+.. ++...
T Consensus 219 ~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 219 LIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 444334456777778888777 76654
No 370
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=36.54 E-value=1.6e+02 Score=27.64 Aligned_cols=57 Identities=12% Similarity=0.174 Sum_probs=38.4
Q ss_pred eEEEEEecCCeEEEEeCCCC-C-------ceEEEecc-ccccEEEEEEcCCCCEEEEEeCCCcEEE
Q 010051 300 RLIFAIATLNSLYIYDTESV-P-------PIAILAGL-HYAAITDIAWSNNARYLALSSQDGYCTL 356 (519)
Q Consensus 300 ~~~~~~~~d~~i~vwd~~~~-~-------~~~~~~~~-~~~~i~~~~~s~~g~~l~~~~~dg~i~v 356 (519)
..++.|+.+|.|.-.-+... . .+..+.-. ...+|..|.++++..+|.+++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 67888888998765543321 1 22233321 3578999999999999999988776655
No 371
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.27 E-value=1e+02 Score=29.37 Aligned_cols=58 Identities=21% Similarity=0.305 Sum_probs=37.7
Q ss_pred ceEEEEEecCCeEEEEeCCCCC----ceEEEecc-ccccEE-EEEEcCCCCEEEEEeCCCcEEE
Q 010051 299 YRLIFAIATLNSLYIYDTESVP----PIAILAGL-HYAAIT-DIAWSNNARYLALSSQDGYCTL 356 (519)
Q Consensus 299 ~~~~~~~~~d~~i~vwd~~~~~----~~~~~~~~-~~~~i~-~~~~s~~g~~l~~~~~dg~i~v 356 (519)
+..++.|..+|.|.-..+.... .+..+.-. ...+|. .|.+++++.+|++++..+.++|
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3678888889988766554321 12222221 246785 8999999999999887655444
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=27.29 E-value=3.1e+02 Score=23.91 Aligned_cols=72 Identities=10% Similarity=0.100 Sum_probs=47.1
Q ss_pred CCCeEEEEEcC---CCCEEEEEeCCCeEEEEEcCC-------CceEEEecccccCeEEEEEcCCCCeEEEeeCCCeEEEE
Q 010051 103 RKDVLDLQWST---DGAFLLSGSVDNSCIIWDVNK-------GSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIY 172 (519)
Q Consensus 103 ~~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~iw 172 (519)
...|..+..-+ +..+++..+.+|.|+.-.+.. |.....+... ..+..+........|+..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 34555554333 577999999999999988754 2222233333 445555555556678888899998888
Q ss_pred ecC
Q 010051 173 ANR 175 (519)
Q Consensus 173 d~~ 175 (519)
...
T Consensus 173 ~~~ 175 (327)
T 3uc1_A 173 SAT 175 (327)
T ss_dssp ECC
T ss_pred ECc
Confidence 776
No 373
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.12 E-value=4e+02 Score=23.69 Aligned_cols=266 Identities=9% Similarity=0.015 Sum_probs=0.0
Q ss_pred CCCEEEEEEec-CCCEEEEEcCCC----cEEEEEecCCccccccccccccccccc----cCcceeEEEEccC--CCeEE-
Q 010051 13 TKPVLTLDFHP-ISGLLATGGADY----DIKIWLINSGEKQKKIPTASYQNSLSY----HGSAINILRFSPC--GGELI- 80 (519)
Q Consensus 13 ~~~V~~~~~sp-~~~~la~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~--~~~i~- 80 (519)
...|.+|+++| +...|.+++..| .|...+-....-............... ....|.++++.|. .+.|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Q ss_pred ------EEEcccCCCcccceeeecc----------------ccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCce
Q 010051 81 ------IWKLHTTETGQAWKVLKNL----------------SFHRKDVLDLQWST-DGAFLLSGSVDNSCIIWDVNKGSV 137 (519)
Q Consensus 81 ------vw~~~~~~~~~~~~~~~~~----------------~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~ 137 (519)
||....+ +..|+.+..+ ......+.+|.+.| +...|+.+..++.|...+ ..|+.
T Consensus 134 g~~~ggl~~S~Dg--G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 134 GTSPQGLFRSTDH--GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEETTEEEEESST--TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EecCCcEEEEcCC--CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Q ss_pred EEEecccccC-------------eEEEEEcCCCCeEEEeeCCCeEEEEecCCCCccccccccceeeEEEeccCcccccCC
Q 010051 138 LQILDAHFHY-------------VQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDS 204 (519)
Q Consensus 138 ~~~~~~h~~~-------------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (519)
-..+...... +.++.++|...-.+..+..+.|...+-...........
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~G~tW~~~~~~------------------- 271 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRIGDA------------------- 271 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETTTTEEECGGGG-------------------
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCCCCcceECCCC-------------------
Q ss_pred ccccceeeecCCCc---ceeeEEEEcc-CCCeEEEecC-----------CcceeeeecccceEEEEeccCCCcccccCCC
Q 010051 205 KSAKNHLFHDETLP---SFFRRLAWSP-DGSFLLVPAG-----------SYKISSMSESINSAYIFSRKDLSRPALQLPG 269 (519)
Q Consensus 205 ~~~~~~~~~~~~~~---~~i~~~~~sp-~g~~l~~~~~-----------~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~ 269 (519)
... ..+..+.++| +...+.++.. + +...+|...+.......+..
T Consensus 272 -----------l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~----------~~~~~~~S~DgG~tW~~~~~ 330 (394)
T 3b7f_A 272 -----------MPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG----------GKPAVYVTRDAGESWQRQDR 330 (394)
T ss_dssp -----------SCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC----------SSCCEEEESSTTSCCEEECB
T ss_pred -----------CCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC----------CceeEEEECCCCCCceECCC
Q ss_pred CCCC--------eEEEEEcCCcccccccCCCCcccccceEEEEEecCCeEEEEeCCCCCceEEEeccccccEEEEEE
Q 010051 270 ASKP--------VVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAW 338 (519)
Q Consensus 270 ~~~~--------v~~~~~sp~~~~l~~~~~~g~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~ 338 (519)
.... ...++++|... ..++.++.++.|+.-+ ..++.-..+.. +...+.++.|
T Consensus 331 glp~~~~~~~~~~~~~~~~p~~~---------------~~l~~g~~~g~l~~S~-D~G~tW~~~~~-~lp~~~~v~~ 390 (394)
T 3b7f_A 331 GLPTDQAWLTVKRQAMTADAHAP---------------VGVYFGTTGGEIWASA-DEGEHWQCIAS-HLPHIYAVQS 390 (394)
T ss_dssp TSCCSSCCCCCCTBSEEECCSSS---------------CCEEEECTTSCEEEES-STTSBCEEEEC-SCSCEEEEEE
T ss_pred CCCCccccceEEEEEEEECCCCC---------------CEEEEEeCCCeEEEEC-CCCCCceEccc-CCCCeeEEEE
No 374
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=21.07 E-value=3.5e+02 Score=26.55 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=36.4
Q ss_pred eEEEEEecCCeEEE-EeCCCCC-------ceEEEec-cccccEEEEEEcCCCCEEEEEeCCCcEEE
Q 010051 300 RLIFAIATLNSLYI-YDTESVP-------PIAILAG-LHYAAITDIAWSNNARYLALSSQDGYCTL 356 (519)
Q Consensus 300 ~~~~~~~~d~~i~v-wd~~~~~-------~~~~~~~-~~~~~i~~~~~s~~g~~l~~~~~dg~i~v 356 (519)
..++.|+.+|.|.- ....... .+..+.. ....+|..|.++++..+|++++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 56888888988753 2222111 1111211 14568999999999999999988775555
No 375
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=20.87 E-value=4.6e+02 Score=23.56 Aligned_cols=156 Identities=14% Similarity=0.160 Sum_probs=77.1
Q ss_pred CCCEEEEEEecCCCEEEEEcCCCcEEEEEecCCccccc-----cccccccccccccCccee--------EEEEccCCCeE
Q 010051 13 TKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKK-----IPTASYQNSLSYHGSAIN--------ILRFSPCGGEL 79 (519)
Q Consensus 13 ~~~V~~~~~sp~~~~la~~~~dg~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~v~--------~~~~~~~~~~i 79 (519)
...|..|+.. ..+.+.-..+|.|+.|=....-.+-. ...+.....+. ...|. .+++..+++.|
T Consensus 15 ~~~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~--~~~i~~va~G~~ht~al~~~gg~v 90 (406)
T 4d9s_A 15 PRKVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALD--GHQIVSVTCGADHTVAYSQSGMEV 90 (406)
T ss_dssp CCCEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGT--TSCEEEEEECSSEEEEEETTTTEE
T ss_pred ccceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccC--CCCEEEEEeCcceEEEEECCCCEE
Confidence 3466666665 33444455688999996543211100 00000111111 11233 34455556799
Q ss_pred EEEEcccCCC------cccceeeeccccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ce----------EEEec
Q 010051 80 IIWKLHTTET------GQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKG-SV----------LQILD 142 (519)
Q Consensus 80 ~vw~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~----------~~~~~ 142 (519)
+.|-...... ................|..++.. ..+.+.-..+|.|+.|-.... ++ ...+.
T Consensus 91 ~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~ 168 (406)
T 4d9s_A 91 YSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168 (406)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECG
T ss_pred EEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEec
Confidence 9996543210 00011111111123357777664 445666678999999975431 11 11122
Q ss_pred cc-ccCeEEEEEcCCCCeEEEeeCCCeEEEEecCC
Q 010051 143 AH-FHYVQGVAWDPLSKYVASLSSDRTCRIYANRP 176 (519)
Q Consensus 143 ~h-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 176 (519)
.. ...|..++.. ..+.+....+|.|..|-...
T Consensus 169 ~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~ 201 (406)
T 4d9s_A 169 AFEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGR 201 (406)
T ss_dssp GGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCT
T ss_pred ccCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCC
Confidence 11 1246666543 34556667899999996544
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.73 E-value=2.3e+02 Score=26.93 Aligned_cols=67 Identities=7% Similarity=0.062 Sum_probs=42.5
Q ss_pred CeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCc----eEEEe--cccccCeE-EEEEcCCCCeEEEeeCCCeEEE
Q 010051 105 DVLDLQWSTDG--AFLLSGSVDNSCIIWDVNKGS----VLQIL--DAHFHYVQ-GVAWDPLSKYVASLSSDRTCRI 171 (519)
Q Consensus 105 ~v~~~~~s~~~--~~l~~~~~dg~i~vwd~~~~~----~~~~~--~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~i 171 (519)
.+++|+....+ ..++.|+.+|.|.-..+..+. .+..+ .....+|. .|.++++..+|++++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35666655433 357788899987665554321 22222 22245775 8999999999999887765555
Done!