Citrus Sinensis ID: 010051

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------52
MKGGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETKEPDKRKTEAETKDDETAINGSIAAESRLIEPERNEAESRKAEAETEDGKRTTNDSSDTAESRPMDLDRNEVDNRKIETEKIQGKQAQSASSRSTAIQNKPAKRRITPMAIDP
cCEEEEEEcccccccEEEEEEcccccEEEEEcccccEEEEEcccccccccccccccccccccccccEEEEEEcccccEEEEEEEEcccccEEEEEEEEcccccccEEEEEEcccccEEEEECccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEccccccEEEEEccccccEEEEEcccEEEEEEccccccccccccccEEEEEEcccccccEEEEEEcccccEEEECccccEEEEccccccEEEEEEccccccccEEcccccccEEEEEEccccccccccccccccccccEEEEEEEcccEEEEEEcccccEEEEEccccccEEEEEEEcccccEEEEECccccEEEEEccccCEEEEECccccEEEEccccccEEEcccccEEEEEcccccEEEEEEcccccEEEEcccccCEEccccccccccccccccccccccEEEEEcccccEEEcccccccccccccccccccccccccccccccEEEEccccccCEEEcccccCEEccccccc
MKGGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGN*V*****************IEASTN**L*************************GSIAAE*************RK*EAETE************AESRPMD**************************************RITPMAIDP
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MKGGTLQINWHDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAINILRFSPCGGELIIWKLHTTETGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSGSVDNSCIIWDVNKGSVLQILDAHFHYVQGVAWDPLSKYVASLSSDRTCRIYANRPTKSKGVEKMNYVCQHVITKAGQHSTDDSKSAKNHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKISSMSESINSAYIFSRKDLSRPALQLPGASKPVVAVRFCPLAFNLRESNSAGFFKLPYRLIFAIATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSNNARYLALSSQDGYCTLVEFENDELGIPISLSGNKVSKDENKSPLVTKSEDMIIEASTNDKLVTAETKEPDKRKTEAETKDDETAINGSIAAESRLIEPERNEAESRKAEAETEDGKRTTNDSSDTAESRPMDLDRNEVDNRKIETEKIQGKQAQSASSRSTAIQNKPAKRRITPMAIDP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chromatin assembly factor 1 subunit FAS2 homolog Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including apical meristem maintenance by regulating the durations of the S-and G2-phases of the cell cycle through its chromatin assembly activity.probableQ6ZD63
Chromatin assembly factor 1 subunit FAS2 Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including seedling growth and leaf hair differentiation. Plays a critical role in the organization of shoot apical meristem (SAM) and root apical meristem (RAM) during postembryonic development by facilitating stable maintenance of gene expression states. Seems not required to maintain transcriptional repression of heterochromatic genes. Involved in heterologous recombination.probableQ9SXY1

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 2-239,250-436
View the alignment between query and template
View the model in PyMOL
Template: 1NR0, chain A
Confidence level:confident
Coverage over the Query: 3-239,250-438
View the alignment between query and template
View the model in PyMOL
Template: 3MKQ, chain A
Confidence level:confident
Coverage over the Query: 2-182,213-239,250-283,300-455
View the alignment between query and template
View the model in PyMOL