Your job contains 1 sequence.
>010053
MEEIVSSSSSSYPMPFCQETSPTLQQRLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWG
DGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDGDVTD
GEWYYTVSVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVC
VSTACGVVELGSSDLIKEDWSLVQLAKSLFGPVIATMLTKQVNLNSESQLQLPNPTTRNN
NNTNNVAPLLDIGMFSGAGAPHHHHHHHQKEWSLEENSKQQTREVSGDVIKKEQLAAGFG
RSSSDSGPSDSDGHFVSGFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYA
LRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQARKSKVVYNVYDNNQSTGS
TIMMPTSSSTTHHLGININIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVH
HASVSSVRETMLQDVVVRIPEGLISEEVIRSAIFQRMQN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010053
(519 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 419 2.0e-75 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 423 4.1e-73 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 412 3.3e-69 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 426 2.1e-68 2
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 378 5.3e-61 3
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 366 1.1e-58 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 272 2.9e-44 3
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 283 6.8e-44 3
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 264 8.1e-40 3
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 209 3.1e-29 3
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 211 4.8e-28 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 213 6.6e-27 3
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 303 9.1e-27 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 189 1.5e-24 2
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 274 1.9e-23 1
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 174 1.1e-19 2
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 167 1.8e-19 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 199 1.2e-13 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 196 4.6e-13 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 171 2.4e-12 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 180 2.9e-11 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 175 3.6e-11 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 180 1.1e-10 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 157 1.3e-10 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 180 1.3e-10 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 170 5.3e-10 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 170 6.9e-10 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 162 7.3e-10 3
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 154 1.2e-09 2
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 167 1.3e-09 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 164 2.9e-09 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 161 3.9e-09 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 161 6.6e-09 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 167 1.1e-08 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 156 1.8e-08 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 156 2.8e-08 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 157 2.9e-08 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 156 3.3e-08 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 148 4.0e-08 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 141 6.2e-08 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 153 7.7e-08 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 137 8.5e-08 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 111 9.9e-08 2
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 149 1.1e-07 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 143 1.2e-07 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 113 1.3e-07 2
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 151 1.4e-07 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 147 1.5e-07 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 145 1.6e-07 2
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 145 2.5e-07 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 136 4.5e-07 2
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 141 4.5e-07 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 112 4.8e-07 2
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 116 5.4e-07 2
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 144 5.6e-07 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 143 6.3e-07 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 136 7.2e-07 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 142 1.2e-06 1
UNIPROTKB|Q5JNS0 - symbol:P0706B05.43 "Os01g0293100 prote... 141 1.3e-06 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 133 1.3e-06 1
UNIPROTKB|Q6YW41 - symbol:B1131G07.17 "Basic helix-loop-h... 144 1.8e-06 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 139 2.0e-06 1
UNIPROTKB|Q6ZGM4 - symbol:OJ1442_E05.19 "cDNA clone:006-3... 133 2.8e-06 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 137 3.0e-06 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 139 3.0e-06 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 116 3.5e-06 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 137 3.5e-06 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 114 4.5e-06 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 134 4.6e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 135 5.6e-06 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 132 5.7e-06 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 133 6.8e-06 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 123 8.5e-06 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 130 1.0e-05 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 134 1.1e-05 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 119 1.2e-05 2
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 132 1.4e-05 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 131 1.5e-05 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 127 1.8e-05 1
TAIR|locus:2042551 - symbol:CPUORF7 "conserved peptide up... 100 2.1e-05 3
UNIPROTKB|Q5N9E6 - symbol:P0505D12.13 "BHLH transcription... 124 2.2e-05 2
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 132 2.5e-05 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 129 4.0e-05 1
TAIR|locus:2157538 - symbol:ILR3 "AT5G54680" species:3702... 122 5.3e-05 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 120 6.0e-05 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 124 6.4e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 124 6.9e-05 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 125 7.5e-05 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 120 7.7e-05 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 125 0.00010 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 118 0.00012 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 125 0.00013 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 110 0.00016 2
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 123 0.00016 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 120 0.00018 2
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 121 0.00021 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 121 0.00025 1
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 117 0.00025 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 120 0.00029 1
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 117 0.00036 1
WARNING: Descriptions of 16 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 419 (152.6 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 90/192 (46%), Positives = 128/192 (66%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
KKRGRKP +GRE PLNHVEAERQRRE+LN RFYALR+VVPNVSKMDKASLL DA+AYI E
Sbjct: 437 KKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINE 496
Query: 387 LRAKVDELEA-KLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDV 445
L++KV + E+ KL+ + + +V + + +G M+++V
Sbjct: 497 LKSKVVKTESEKLQIKNQLEEVKLELA-GRKASASGGDMSSSCSSIKPVG-----MEIEV 550
Query: 446 KIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLIS 505
KI+G +AMIRV+ N+PAA+LM L DLE V+HAS+S V + M+Q V++ + +
Sbjct: 551 KIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYT 610
Query: 506 EEVIRSAIFQRM 517
+E +R+++ ++
Sbjct: 611 QEQLRASLISKI 622
Score = 364 (133.2 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 75/189 (39%), Positives = 114/189 (60%)
Query: 23 TLQQRLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAG 82
TLQQRLQ +++ E W Y+IFWQP D +G VL WGDGY++G +D A
Sbjct: 67 TLQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPF 126
Query: 83 NEPKFGFFLERKKVSKEVQ-VHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSVL 141
+ P + RKKV +E+ + G D VD +VTD EW++ VS+T+SFA G G +
Sbjct: 127 STPADQEY--RKKVLRELNSLISGGVAPSDDAVDEEVTDTEWFFLVSMTQSFACGAG-LA 183
Query: 142 GRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWS 201
G+ F++G+ VW++G +L CER K+ + G+ T+ C+ +A GVVE+GS++ I++
Sbjct: 184 GKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTEPIRQSSD 243
Query: 202 LVQLAKSLF 210
L+ + LF
Sbjct: 244 LINKVRILF 252
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 423 (154.0 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 85/191 (44%), Positives = 126/191 (65%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+KRGRKP +GRE PLNHVEAERQRRE+LN RFY+LR+VVPNVSKMDKASLL DA++YI E
Sbjct: 401 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISE 460
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVK 446
L++K+ + E+ E ++ V+ N + + I M+VDVK
Sbjct: 461 LKSKLQKAESDKEELQKQIDVM-----NKEAGNAKSSVKDRKCLNQESSVLIE-MEVDVK 514
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISE 506
I+G +AMIR+QC N+P AK M+ L++L+ V+HAS+S V + M+Q V++ ++
Sbjct: 515 IIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQ 574
Query: 507 EVIRSAIFQRM 517
+ ++ A+ +++
Sbjct: 575 DQLKVALTEKV 585
Score = 334 (122.6 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 73/206 (35%), Positives = 116/206 (56%)
Query: 13 PMPFCQETSPTLQQRLQFIVQNRPEWWVYSIFWQPL-------KDVNGRLVLSWGDGYFR 65
P P Q LQQRLQ +++ E W Y++FWQ + N ++L WGDGY++
Sbjct: 52 PPPLPQVNEDNLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYK 111
Query: 66 GSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQ-VHFGEDMDLDRMVDGDVTDGEWY 124
G ++ + + + A + RK+V +E+ + G D D +VTD EW+
Sbjct: 112 GEEEKSRKKKSNPASAAEQE------HRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWF 165
Query: 125 YTVSVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTA 184
+ VS+T+SF G G + G+ FS+ D +WL+G + L CER ++ +++G+QT+VCV+T
Sbjct: 166 FLVSMTQSFVKGTG-LPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATE 224
Query: 185 CGVVELGSSDLIKEDWSLVQLAKSLF 210
GVVELGSS++I + LV + F
Sbjct: 225 NGVVELGSSEIIHQSSDLVDKVDTFF 250
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 412 (150.1 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 83/191 (43%), Positives = 124/191 (64%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+KRGRKP +GRE PLNHVEAERQRRE+LN RFY+LR+VVPNVSKMDKASLL DA++YI E
Sbjct: 400 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINE 459
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVK 446
L++K+ + E+ +E+ +K + NN +I M++DVK
Sbjct: 460 LKSKLQQAESD-KEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIE-MEIDVK 517
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISE 506
I+G + MIRVQC ++P A+ M+ L++L+ V+HAS+S V + M+Q V++ +
Sbjct: 518 IIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFNH 577
Query: 507 EVIRSAIFQRM 517
+ ++ A+ ++
Sbjct: 578 DQLKVALMTKV 588
Score = 308 (113.5 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 72/204 (35%), Positives = 112/204 (54%)
Query: 13 PMPFCQETSPTLQQRLQFIVQNRPEWWVYSIFWQPLKDVNGR-----LVLSWGDGYFRGS 67
P P Q TLQQRLQ ++++ E W Y+IFWQ D + ++L WGDGY++G
Sbjct: 43 PQP--QFNEDTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGE 100
Query: 68 KDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDL-DRMVDGDVTDGEWYYT 126
+D K+ N RK+V +E+ + + D D +VTD EW++
Sbjct: 101 ED--------KEKKKNNTNTAEQEHRKRVIRELNSLISGGIGVSDESNDEEVTDTEWFFL 152
Query: 127 VSVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACG 186
VS+T+SF G G + G F + +WL+G L CER + +++G++T+VC++T G
Sbjct: 153 VSMTQSFVNGVG-LPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNG 211
Query: 187 VVELGSSDLIKEDWSLVQLAKSLF 210
VVELGSS++I + L+ +LF
Sbjct: 212 VVELGSSEVISQSSDLMHKVNNLF 235
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 426 (155.0 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 90/191 (47%), Positives = 124/191 (64%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+KRGRKP +GRE PLNHVEAERQRRE+LN RFYALR+VVPNVSKMDKASLL DA++YI E
Sbjct: 509 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINE 568
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVK 446
LR K+ LE + + + D G + ++++ K
Sbjct: 569 LRGKLTALETDKETLQSQMESLKKERDARPPAPSGGGGDG--------GARCHAVEIEAK 620
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISE 506
I+G EAMIRVQC N+PAA+LM LR+L+ V+HASVS V++ M+Q V V++ + S+
Sbjct: 621 ILGLEAMIRVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVAVKMASRVYSQ 680
Query: 507 EVIRSAIFQRM 517
+ + +A++ R+
Sbjct: 681 DQLNAALYTRI 691
Score = 297 (109.6 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 70/191 (36%), Positives = 108/191 (56%)
Query: 23 TLQQRLQFIVQNRPEWWVYSIFWQPLKDVN-GRLVLSWGDGYFRGSKDFATRAAAGKQGA 81
TLQQRLQ I++ E W Y+IFWQ DV+ G +L WGDGY++G D + + A
Sbjct: 67 TLQQRLQSIIEGSRETWTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDKRKQRSSTPAA 126
Query: 82 GNEPKFGFFLERKKVSKEVQ-VHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSV 140
E + RK+V +E+ + G D V+ +VTD EW++ VS+T+SF G G +
Sbjct: 127 AAEQE-----HRKRVLRELNSLIAGAGAAPDEAVEEEVTDTEWFFLVSMTQSFPNGLG-L 180
Query: 141 LGRVFSSGDYVWL-TGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKED 199
G+ + W+ TG L C+R ++A G++T+VC+ A GV+ELGS+D+I +
Sbjct: 181 PGQALFAAQPTWIATG---LSSAPCDRARQAYTFGLRTMVCLPLATGVLELGSTDVIFQT 237
Query: 200 WSLVQLAKSLF 210
+ ++LF
Sbjct: 238 GDSIPRIRALF 248
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 378 (138.1 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 76/177 (42%), Positives = 118/177 (66%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLRE 400
L+HVEAE+QRRE+LNHRFYALR++VP VS+MDKASLL+DAV+YI+ L++K+D+LE ++++
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 401 QARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVKIVGSEAMIRVQCPD 460
+ +N + G ++ +V VKIVG EA+IRVQ +
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDL---EVQVKIVGEEAIIRVQTEN 364
Query: 461 INYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISEEVIRSAIFQRM 517
+N+P + LM L +++ V HA+ S + + M+QDVVV +PEGL SE+ +R+ + + +
Sbjct: 365 VNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSEDRLRTTLVRTL 421
Score = 156 (60.0 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 46/134 (34%), Positives = 66/134 (49%)
Query: 88 GFFLERKKVSKEVQVHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSVLGRVFSS 147
G F K + + + + ++ + M+DG D E +Y S F D S V S
Sbjct: 74 GHFCGNKNNNSQ-ENYTTNSIECELMMDGG-DDLELFYAAS----FYGEDRSPRKEV-SD 126
Query: 148 GDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAK 207
VWLTG EL+ ER KEA HG+ TLV + G++ELGSS+ I ++ + + K
Sbjct: 127 ESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNRNFINRVK 186
Query: 208 SLFGPVIATMLTKQ 221
S+FG T T Q
Sbjct: 187 SIFGSGKTTKHTNQ 200
Score = 120 (47.3 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 24 LQQRLQFIVQNRPEWWVYSIFWQPL-KDVNGRLVLSWGDGYFRGSKD 69
LQQ+L+F+V+ P+ W Y IFWQ + D + R L W DG+F G+K+
Sbjct: 35 LQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKN 81
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 366 (133.9 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 82/193 (42%), Positives = 116/193 (60%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
KKRGRKP GR+ PLNHVEAER RRE+LNHRFYALR+VVPNVSKMDK SLL DAV YI E
Sbjct: 328 KKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINE 387
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDN--NQXXXXXXXXXXXXXXXHHLGININIMDVD 444
L++K + +E L + A ++ +N Q + I + IM+ D
Sbjct: 388 LKSKAENVE--LEKHA--IEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESD 443
Query: 445 VKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLI 504
+AM+RV+ ++P A+LM+ L DLE V+HAS+S + + M+Q V++ +
Sbjct: 444 ------DAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIY 497
Query: 505 SEEVIRSAIFQRM 517
+E +R + ++
Sbjct: 498 KQEELRDLLMSKI 510
Score = 254 (94.5 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 23 TLQQRLQFIVQNRPEWWVYSIFWQP-LKDVNGRLVLSWGDGYFRGSKDFATRAAAG-KQG 80
TL +RL ++ E W Y+IFW+P D +G VL WGDG + G + TR K+
Sbjct: 33 TLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKT 92
Query: 81 AGNEPKFGFFLERKKVSKEVQVHF-GEDMDL--DRMVDGD---VTDGEWYYTVSVTRSFA 134
+ P+ R V +E+ + GE + D + D D VTD EW++ VS+T SF
Sbjct: 93 ILSSPEEKE--RRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFG 150
Query: 135 IGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSD 194
G G + G+ F+S + V +TG + C+R K+ G+QT++C+ + GV+EL S++
Sbjct: 151 NGSG-LAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTE 209
Query: 195 LIKEDWSLVQLAKSLFGPVIATMLTKQVNLNSE 227
I+ + L + LFG + + N NSE
Sbjct: 210 EIRPNSDLFNRIRFLFGG--SKYFSGAPNSNSE 240
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 272 (100.8 bits), Expect = 2.9e-44, Sum P(3) = 2.9e-44
Identities = 55/79 (69%), Positives = 65/79 (82%)
Query: 323 NVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVA 382
N +KRGR+P +GR LNHVEAERQRRE+LN RFYALRSVVPN+SKMDKASLL DAV+
Sbjct: 414 NNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVS 473
Query: 383 YIKELRAKVDELEAKLREQ 401
YI EL AK+ +EA+ RE+
Sbjct: 474 YINELHAKLKVMEAE-RER 491
Score = 210 (79.0 bits), Expect = 2.9e-44, Sum P(3) = 2.9e-44
Identities = 67/192 (34%), Positives = 94/192 (48%)
Query: 24 LQQRLQFIVQNRPEW----WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQ 79
LQ +L +V+ RP W Y+IFWQ + G LVL WGDGY R K+
Sbjct: 48 LQNKLSDLVE-RPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRIL 106
Query: 80 GAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDGD-VTDGEWYYTVSVTRSFAIGDG 138
G E + + RK+V +++ FG + + + D VTD E + S+ SF G+G
Sbjct: 107 SMGREEETHQTM-RKRVLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEG 165
Query: 139 SVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKE 198
G+ F+S VWL+ C R A+ GIQT+V V T GVVELGS+ + E
Sbjct: 166 GP-GKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPE 224
Query: 199 DWSLVQLAKSLF 210
+ +SLF
Sbjct: 225 SEDSILSIRSLF 236
Score = 91 (37.1 bits), Expect = 2.9e-44, Sum P(3) = 2.9e-44
Identities = 20/78 (25%), Positives = 45/78 (57%)
Query: 442 DVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPE 501
D++V+ G + +R+ CP ++PA+++ + + V ++++ ++T+L VV+ E
Sbjct: 505 DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKSEE 564
Query: 502 GLISEEVIRSAIFQRMQN 519
L E++I SA+ + N
Sbjct: 565 -LTKEKLI-SALSREQTN 580
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 283 (104.7 bits), Expect = 6.8e-44, Sum P(3) = 6.8e-44
Identities = 54/69 (78%), Positives = 62/69 (89%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+KRGRKP +GRE PLNHVEAERQRRE+LN RFYALRSVVPN+SKMDKASLL DA++YIKE
Sbjct: 380 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKE 439
Query: 387 LRAKVDELE 395
L+ KV +E
Sbjct: 440 LQEKVKIME 448
Score = 200 (75.5 bits), Expect = 6.8e-44, Sum P(3) = 6.8e-44
Identities = 64/213 (30%), Positives = 104/213 (48%)
Query: 20 TSPTLQQRLQFIVQ--NRPEW-WVYSIFWQPLKDVNGRLVLSWGDGYFRG-SKDFATRAA 75
T TL ++L +V N + W Y+IFWQ +G+ VL WGDG R +++ ++
Sbjct: 44 TDDTLNKKLSSLVDWPNSENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVV 103
Query: 76 AGKQ--GAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSF 133
G E + + ++ + K ++ G D D + VT E ++ S+ F
Sbjct: 104 RSYNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFF 163
Query: 134 AIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSS 193
G+G GR +SSG +VWL+ + C R A+ GI+T+V V T GV+ELGS
Sbjct: 164 NHGEGGP-GRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSV 222
Query: 194 DLIKEDWSLVQLAKSLFGPVIA--TMLTKQVNL 224
+ E+ LV+ ++LF + M+T N+
Sbjct: 223 WSLPENIGLVKSVQALFMRRVTQPVMVTSNTNM 255
Score = 82 (33.9 bits), Expect = 6.8e-44, Sum P(3) = 6.8e-44
Identities = 18/71 (25%), Positives = 39/71 (54%)
Query: 442 DVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPE 501
+VD++ + E ++RV P ++PA++++ +R+ + A +S +TM V++
Sbjct: 471 EVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNN 530
Query: 502 G---LISEEVI 509
G L E++I
Sbjct: 531 GSDPLTKEKLI 541
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 264 (98.0 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+KRGRKP +GRE LNHVEAERQRRE+LN RFYALR+VVPN+SKMDKASLLADA+ YI +
Sbjct: 305 RKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITD 364
Query: 387 LRAKVD--ELEAKLREQARKSKVVYNVYDNNQ 416
++ K+ E E ++ ++ +++ D Q
Sbjct: 365 MQKKIRVYETEKQIMKRRESNQITPAEVDYQQ 396
Score = 175 (66.7 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 61/193 (31%), Positives = 94/193 (48%)
Query: 24 LQQRLQFIVQNRPEWWVYSIFWQPLKDVNGR--LVLSWGDGYFRGSKDFATRAAAGKQGA 81
LQQ L+ +V+ W Y++FW +VN VL WGDG+ R K A+G+ +
Sbjct: 50 LQQGLRHVVEGSD--WDYALFWLA-SNVNSSDGCVLIWGDGHCRVKK-----GASGEDYS 101
Query: 82 GNEPKFGFFLERKKVSKEVQVHF-GEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSV 140
+ +++V +++ + F G D D + G +TD + +Y S+ SF D +
Sbjct: 102 QQDEI------KRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRC-DTNK 154
Query: 141 LGRV--FSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKE 198
G + SG +W Y R AR G QT++ V GVVELGS I E
Sbjct: 155 YGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPE 214
Query: 199 DWSLVQLAKSLFG 211
D S++++ KS+FG
Sbjct: 215 DKSVIEMVKSVFG 227
Score = 84 (34.6 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 442 DVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPE 501
+VD + +A++R+ CP +P +K++ LR+ E H ++V+ E ++ +R P+
Sbjct: 391 EVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLR-PQ 449
Query: 502 GLISEEVIRSAI 513
G + E ++ +
Sbjct: 450 GGCTAEQLKDKL 461
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 209 (78.6 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 63/193 (32%), Positives = 94/193 (48%)
Query: 24 LQQRLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGN 83
LQ L+ VQ+ W YS+FWQ + VL WG+GY+ G+ TR
Sbjct: 20 LQGLLKTAVQSVD--WTYSVFWQFCPQ---QRVLVWGNGYYNGA--IKTRKTTQPAEVTA 72
Query: 84 EPKFGFFLERKKVSKEVQVHF--GEDMDLDRMVDG----DVTDGEWYYTVSVTRSFAIGD 137
E LER + +E+ GE R D+T+ EW+Y + V+ SF
Sbjct: 73 EEAA---LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPS 129
Query: 138 GSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIK 197
G + G+ ++ +VWL+G +E+ R A+ IQT+VC+ GVVELG++ ++
Sbjct: 130 G-MPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVR 188
Query: 198 EDWSLVQLAKSLF 210
ED V+L KS F
Sbjct: 189 EDVEFVELTKSFF 201
Score = 181 (68.8 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 38/68 (55%), Positives = 48/68 (70%)
Query: 337 RESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEA 396
RE L+HV AER+RRE+LN +F LRS+VP V+KMDK S+L D +AY+ LR +V ELE
Sbjct: 359 RED-LSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELEN 417
Query: 397 KLREQARK 404
EQ K
Sbjct: 418 THHEQQHK 425
Score = 47 (21.6 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 20/79 (25%), Positives = 42/79 (53%)
Query: 442 DVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDL-EFHVHHASV-SSVRETMLQDVV--- 496
+V+V I+ ++ ++ ++C Y L+D+L+ L E + +V +SV + + +
Sbjct: 437 EVEVSIIENDVLLEMRC---EYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAK 493
Query: 497 VRIPEGLISEEVIRSAIFQ 515
VR + I+E ++ AI Q
Sbjct: 494 VRGKKASIAE--VKRAIHQ 510
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 211 (79.3 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 71/218 (32%), Positives = 103/218 (47%)
Query: 20 TSP-TLQQRLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGK 78
T P L+++L V+N W Y IFW G VL WGDGY+ G D TR
Sbjct: 8 TVPDNLKKQLAVSVRNIQ--WSYGIFWSVSASQPG--VLEWGDGYYNG--DIKTRKTI-- 59
Query: 79 QGAGNEPKFGFF-LERKKVSKEV--QVHFGEDM-----DLDRMVDG------DVTDGEWY 124
Q A E K LER + +E+ + E + R D+TD EWY
Sbjct: 60 QAA--EVKIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWY 117
Query: 125 YTVSVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTA 184
Y V ++ F IG+G + G S+G+ +WL R A+ +QT+VC
Sbjct: 118 YLVCMSFVFNIGEG-IPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFL 176
Query: 185 CGVVELGSSDLIKEDWSLVQLAKSLF--GPVIATMLTK 220
GV+E+G+++ IKED +++Q K+LF P T+ T+
Sbjct: 177 GGVLEIGTTEHIKEDMNVIQSVKTLFLEAPPYTTISTR 214
Score = 178 (67.7 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 49/180 (27%), Positives = 92/180 (51%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
++ + +KK P + E+ NH +E++RRE+LN RF LRS++P++SK+DK S+L D
Sbjct: 385 EVPLMNKKEELLPDTPEETG-NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDT 443
Query: 381 VAYIKELRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININI 440
+ Y+++L+ +V ELE+ RE A ++ + + G ++N+
Sbjct: 444 IEYLQDLQKRVQELES-CRESA-DTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNV 501
Query: 441 -----MDV-------DVKI--VGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
D+ +++I +G+E +I ++C ++MDV+ DL H S+
Sbjct: 502 GEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSST 561
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 213 (80.0 bits), Expect = 6.6e-27, Sum P(3) = 6.6e-27
Identities = 61/203 (30%), Positives = 93/203 (45%)
Query: 20 TSP-TLQQRLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGS----KDF-ATR 73
T P L++ L V+N W Y IFW +G VL WGDGY+ G K A+
Sbjct: 9 TVPENLKKHLAVSVRNIQ--WSYGIFWSVSASQSG--VLEWGDGYYNGDIKTRKTIQASE 64
Query: 74 AAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDG------DVTDGEWYYTV 127
A + G + E V++ + R D+ D EWYY V
Sbjct: 65 IKADQLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLV 124
Query: 128 SVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGV 187
++ F IG+G + GR F++G+ +WL H R A+ ++T+VC GV
Sbjct: 125 CMSFVFNIGEG-MPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGV 183
Query: 188 VELGSSDLIKEDWSLVQLAKSLF 210
VE+G+++ I ED +++Q K+ F
Sbjct: 184 VEIGTTEHITEDMNVIQCVKTSF 206
Score = 157 (60.3 bits), Expect = 6.6e-27, Sum P(3) = 6.6e-27
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 337 RESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEA 396
R+ NH E++RRE+LN RF LR ++P+++K+DK S+L D + Y++EL +V ELE+
Sbjct: 436 RDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
Score = 49 (22.3 bits), Expect = 6.6e-27, Sum P(3) = 6.6e-27
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 449 GSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
G+E +I ++C ++MDV+ DL H S+
Sbjct: 565 GNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSST 602
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 303 (111.7 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 80/197 (40%), Positives = 112/197 (56%)
Query: 326 SKKRGRKPTSGRESP-LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYI 384
+K+RGRKP + P ++HVEAERQRRE+LN RF LR+ VP VS+MDKASLLADA AYI
Sbjct: 94 AKRRGRKPGPRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYI 153
Query: 385 KELRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVD 444
ELRA+V LE+ R QA ++ + G++ V+
Sbjct: 154 AELRARVARLESDAR-QAAAARFEPSSCGGGGNASYHGGGGGGGAAP---GLD---EAVE 206
Query: 445 VKIVGSEAM-IRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVR-ETMLQDVVVRIPEG 502
V+ +G +A +RV + A+LM LR LE V HA V V T +Q+V+V +P
Sbjct: 207 VRKMGRDAAAVRVTTTGARHAPARLMGALRSLELPVQHACVMRVHGATTVQEVLVDVPAA 266
Query: 503 LISEEVIRSAIFQRMQN 519
L + +R+A+ QR+Q+
Sbjct: 267 LQDGDALRAALLQRLQD 283
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 189 (71.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 55/172 (31%), Positives = 81/172 (47%)
Query: 39 WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSK 98
W Y+IFW + G VL+W DG++ G + TR + + + L R +
Sbjct: 32 WSYTIFWSTSTSLPG--VLTWNDGFYNG--EVKTRKISNLEDLTADQ---LVLRRSEQLS 84
Query: 99 EVQVHF--GE-DMDLDRMVDG----DVTDGEWYYTVSVTRSFAIGDGSVLGRVFSSGDYV 151
E+ GE D + V D+ D EWYY V +T +F G G + GR ++S V
Sbjct: 85 ELYYSLLSGECDHRARKPVAALSPEDIADTEWYYVVCMTYAFRPGQG-LPGRSYASNRSV 143
Query: 152 WLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLV 203
WL R A+ IQT+VC+ GV+ELG++D + ED +LV
Sbjct: 144 WLCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSEDPNLV 195
Score = 164 (62.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQ 401
+HV +ER+RRE+LN F L+S++P+V K+DKAS+LA+ + Y+K L +V ELE+ RE
Sbjct: 378 SHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESSSREP 437
Query: 402 AR 403
+R
Sbjct: 438 SR 439
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 80/203 (39%), Positives = 111/203 (54%)
Query: 325 TSKKRGRKPT----SGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
T+K+RGRKP G P+ HVEAERQRRE+LN RF LR+ VP VS+MDKASLLADA
Sbjct: 73 TTKRRGRKPGPRSGGGGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADA 132
Query: 381 VAYIKELRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGIN-IN 439
V YI ELR +V+ LEA +AR++ + + LG I
Sbjct: 133 VDYIAELRRRVERLEA----EARRAPLAPSA-------------AAAAAWAAGLGAGAIG 175
Query: 440 IMDVDVKIVGSEAMI-RVQ--CPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVV 496
D+ V+++G +A I R+ + A++M +R L V HASV+ V +QDV+
Sbjct: 176 RDDLVVRMIGRDAAILRLTTAAAAARHAPARMMCAVRALNLAVQHASVARVGGATVQDVM 235
Query: 497 VR-IPEGLISEEVIRSAIFQRMQ 518
V +P L E +R+A+ +Q
Sbjct: 236 VDDVPAALQDEARLRAALLHTLQ 258
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 174 (66.3 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 59/195 (30%), Positives = 87/195 (44%)
Query: 27 RLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGS-----KDFATRAAAGKQGA 81
R Q + R W Y+IFW G VL WG+G + G K + + G Q +
Sbjct: 24 RKQLALAVRSVQWSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYESHYKYGLQKS 81
Query: 82 GNEPKFGF-FLERKKVSKEVQVH--FGEDMD----LDRMVD-GDVTDGEWYYTVSVTRSF 133
K LE + H +D D M+ D++D EWYY VS++ F
Sbjct: 82 KELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVF 141
Query: 134 AIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSS 193
+ + GR ++G+ +WL + R AR IQT+VC GV+ELG +
Sbjct: 142 SPSQ-CLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVT 200
Query: 194 DLIKEDWSLVQLAKS 208
+LI ED +L++ KS
Sbjct: 201 ELISEDHNLLRNIKS 215
Score = 138 (53.6 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 45/159 (28%), Positives = 79/159 (49%)
Query: 337 RESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEA 396
+ S LN + +R+E N +F LR++VP V+++DK S+L + + Y++EL A+V+ELE+
Sbjct: 334 QNSGLNQDDPSDRRKE--NEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELES 391
Query: 397 ---KLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIM---D---VDVKI 447
+ R+ K N+ D+ + G + D + VK+
Sbjct: 392 CMGSVNFVERQRKTTENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKL 451
Query: 448 VGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
+E +I V+C +Y A +M+ L +L H+ SV S
Sbjct: 452 KETEVVIEVRCSYRDYIVADIMETLSNL--HMDAFSVRS 488
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 167 (63.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 326 SKKRGRKPTSGRESPL-NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYI 384
S RG + +ES + NHV +ER+RRE+LN F L+S+VP++ K+DKAS+L + +AY+
Sbjct: 375 STGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYL 434
Query: 385 KELRAKVDELEA 396
K L +V ELE+
Sbjct: 435 KVLEKRVKELES 446
Score = 143 (55.4 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 46/163 (28%), Positives = 75/163 (46%)
Query: 39 WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSK 98
W Y+IFW G VL+W DG++ G + + AG ++R + +
Sbjct: 32 WSYAIFWSISTSCPG--VLTWNDGFYNGVVKTRKISNSADLTAGQ-----LVVQRSEQLR 84
Query: 99 EVQVHF--GE-DMDLDRMVDG----DVTDGEWYYTVSVTRSFAIGDGSVLGRVFSSGDYV 151
E+ GE D R + D+ D EWYY V +T SF G G + G+ ++S V
Sbjct: 85 ELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQPGQG-LPGKSYASNASV 143
Query: 152 WLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSD 194
WL Q + + + + +T++C+ GV+ELG++D
Sbjct: 144 WL---RNAQSADSKTFLRSLL--AKTIICIPFTSGVLELGTTD 181
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 46/168 (27%), Positives = 86/168 (51%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
++ + KR + T + + +H+ AER+RRE+L RF AL +++P + KMDKAS+L DA
Sbjct: 105 ELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDA 164
Query: 381 VAYIKELRAKVDELEAKLREQARKSKVVYN----VYDNNQXXXXXXXXXXXXXXXHHLGI 436
+ +IK L+ V E E + +E+ +S V+ V D N
Sbjct: 165 IKHIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSS----- 219
Query: 437 NINIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASV 484
+ N+ +++V++ G + +I++ C K+M + L + +++V
Sbjct: 220 SSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 196 (74.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 52/184 (28%), Positives = 97/184 (52%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
+ N KR + + + + +H+ AER+RRE+L RF AL ++VP + KMDKAS+L DA
Sbjct: 131 EFNRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDA 190
Query: 381 VAYIKELRAKVDELEAKLREQ-------ARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHH 433
+ +IK L+ +V ELE + +E+ +KSK++ + DNNQ
Sbjct: 191 LKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILD--DNNQSFSSSCEDGFS------ 242
Query: 434 LGININIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQ 493
++++ +++V+ + +I++ C AK+M + L + ++SV + T+
Sbjct: 243 ---DLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPTL-- 297
Query: 494 DVVV 497
D+ +
Sbjct: 298 DITI 301
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 171 (65.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQ 401
NHV +ER+RRE+L F L+SVVP++ K+DKAS+LA+ +AY+KEL +V+ELE+ +
Sbjct: 244 NHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQPS 303
Query: 402 AR 403
R
Sbjct: 304 PR 305
Score = 67 (28.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 175 IQTLVCVSTAC-GVVELGSSDLIKEDWSLV-QLAKSLF 210
I+T+VCV GV+ELG++D + ED +LV ++ SL+
Sbjct: 18 IKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITASLW 55
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 160 QLYECER-----VKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQL 205
++ ECE +++ M I L + V++ SS + + WS QL
Sbjct: 105 EVAECESNAHNDLEQITMDDIGELYSLCEELDVLDDDSSSWVADPWSSFQL 155
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 38/87 (43%), Positives = 56/87 (64%)
Query: 319 FTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLA 378
F I T+KKR K G+ P ++ AER+RR+RLN R LRS+VP ++KMD+ S+L
Sbjct: 130 FISIGETNKKRSNKKLEGQ--PSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILG 187
Query: 379 DAVAYIKELRAKVDELEAKLREQARKS 405
DA+ Y+KEL K+++L+ +E S
Sbjct: 188 DAIDYMKELLDKINKLQEDEQELGSNS 214
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 175 (66.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 333 PTSGRESPLN--HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAK 390
P SP + +V +ER RR++LN R +ALRSVVPN+SK+DKAS++ D++ Y++EL +
Sbjct: 43 PDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQ 102
Query: 391 VDELEAKLREQARKSKVVYNV---YDNN 415
LEA++RE +S ++ N YD N
Sbjct: 103 EKTLEAEIRELESRSTLLENPVRDYDCN 130
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 324 VTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAY 383
VT +G+K + P ++ AER+RR++LN R Y LRSVVP +SKMD+AS+L DA+ Y
Sbjct: 322 VTGDGKGKK----KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEY 377
Query: 384 IKELRAKVDELEAKLREQARKSKV 407
+KEL K+++L+ +L S +
Sbjct: 378 LKELLQKINDLQNELESSPATSSL 401
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 48/173 (27%), Positives = 79/173 (45%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVP--NVSKMDKASLLADAVAYIKELRAKVDELEAKL 398
++H+ ER RR ++N +LRS+ P + + D+AS++ + +IKEL+ V LE+K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 399 REQA-RKSKVVYNVYDNNQXXXXXXXXXX---------XXXXXHHLGININI--MDVDVK 446
R + + Y+ +G N +V+ K
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRI 499
I GS ++RV I K++ VL L F V H ++SS+ ET+L VV+I
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 34/71 (47%), Positives = 53/71 (74%)
Query: 332 KPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKV 391
K SG+ S ++ AER+RR++LN R YALRS+VP ++K+D+AS+L DA+ Y+KEL+ +
Sbjct: 304 KKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEA 363
Query: 392 DELEAKLREQA 402
EL+ +L E +
Sbjct: 364 KELQDELEENS 374
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 170 (64.9 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 42/143 (29%), Positives = 71/143 (49%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQ 401
+H+ AER+RRE++N RF L +V+P + KMDKA++L DAV Y+KEL+ KV LE E+
Sbjct: 167 DHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLE----EE 222
Query: 402 ARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVKIVGSEAMIRVQCPDI 461
+ V + + +++V++ ++RVQC +
Sbjct: 223 DGGGRPAAMVVRKSSCSGRQSAAGDGDGEGR-------VPEIEVRVWERSVLVRVQCGNS 275
Query: 462 NYPAAKLMDVLRDLEFHVHHASV 484
+L+ + +L + H SV
Sbjct: 276 RGLLVRLLSEVEELRLGITHTSV 298
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 170 (64.9 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 34/72 (47%), Positives = 53/72 (73%)
Query: 335 SGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
+G S NHV +ER+RRE+LN F L+S+VP++ K+DKAS+L++ +AY+KEL +V EL
Sbjct: 181 AGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQEL 240
Query: 395 EA--KLREQARK 404
E+ K+ A++
Sbjct: 241 ESGKKVSRPAKR 252
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 162 (62.1 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 330 GRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRA 389
GR + R+ N +EAER+RR++LN Y LRS+VPN++KMD+AS+L DA+ YI L+
Sbjct: 274 GRSGGAKRQQCKN-LEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQK 332
Query: 390 KVDELEAKLRE 400
+V EL+ +L +
Sbjct: 333 QVKELQDELED 343
Score = 47 (21.6 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 174 GIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLFG 211
G +T + V A G+VEL +S + E+ + +L + G
Sbjct: 116 GAKTRLLVPVAGGLVELFASRYMAEEQQMAELVMAQCG 153
Score = 47 (21.6 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 446 KIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQ--DVVVRIPEGL 503
++ G+E ++V +LMD + L V + +V++ + +L V+VR E
Sbjct: 422 QVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMVRDSEVA 481
Query: 504 ISEEVIRSAIFQ 515
+ + +R ++ +
Sbjct: 482 VQADRVRDSLLE 493
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 154 (59.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 347 ERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQA 402
ER RR +LN + YALRSVVPN++KMDKAS++ DA+ YI+ L+A+ ++ LRE A
Sbjct: 98 ERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQM---LREVA 150
Score = 52 (23.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/81 (19%), Positives = 38/81 (46%)
Query: 438 INIMDVDVKIVGSEAMI-RVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVV 496
+ I ++ V VG ++ V C A++ L +L V A+++SV + +
Sbjct: 217 VEIQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAGCPMHTLF 276
Query: 497 VRIP--EGLISEEVIRSAIFQ 515
V + + + ++++ +A+ Q
Sbjct: 277 VEVDHMDSVQMKQMVEAALSQ 297
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 35/76 (46%), Positives = 55/76 (72%)
Query: 325 TSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYI 384
T+KK+ +K G+ P ++ AER+RR+RLN R LRS+VP +SKMD+ S+L DA+ Y+
Sbjct: 164 TNKKKSKK-LEGQ--PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Query: 385 KELRAKVDELEAKLRE 400
KEL K+++L+ + +E
Sbjct: 221 KELLDKINKLQDEEQE 236
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 164 (62.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
H+ AER+RRE++N RF L +V+P + KMDKA++L+DAV Y+KE++ K+ ELE
Sbjct: 193 HIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE 245
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 161 (61.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
L HV AER+RRE++N RF L +V+P + KMDKA++L+DA +YI+EL+ K+ LE
Sbjct: 129 LEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALE 183
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 161 (61.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 31/66 (46%), Positives = 48/66 (72%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQA 402
H+ AER+RRE+L+ RF AL +VP + KMDKAS+L DA+ Y+K+L+ +V LE + R +
Sbjct: 182 HILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
Query: 403 RKSKVV 408
++ V+
Sbjct: 242 VEAAVL 247
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 167 (63.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 340 PLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKL 398
P ++ AER+RR++LN R Y LRSVVP +SKMD+AS+L DA+ Y+KEL ++++L +L
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNEL 363
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 79 QGAGNEPKFGFFLERKKVSKEVQV 102
+G G+ GF R KV K ++V
Sbjct: 199 EGFGSPANGGFVGNRAKVLKPLEV 222
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/171 (27%), Positives = 78/171 (45%)
Query: 321 DINVTSKKRGRKPTSGRESP---LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLL 377
D V SK++ GR P HV AER+RR++LN R AL +++P + K DKA++L
Sbjct: 108 DQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVL 167
Query: 378 ADAVAYIKELRAKVDELE-----AKLREQAR---KSKVVYNVYDNNQXXXXXXXXXXXXX 429
DA+ ++K+L+ +V +LE K +Q+ K VY D++
Sbjct: 168 EDAIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSS 227
Query: 430 XXHHLGININIMD-VDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHV 479
+ I M ++ ++ + +IRV C K++ L V
Sbjct: 228 SSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEV 278
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 331 RKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAK 390
R P G +P ++ AER+RR+RLN R LRSVVP +SKMD+ S+L D + Y+KEL +
Sbjct: 187 RPPQPG--APSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDR 244
Query: 391 VDELEAK 397
+ L+ +
Sbjct: 245 IKNLQVE 251
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 326 SKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIK 385
S P SG + L H+ +ER+RRE+LN F AL++V+P SK DK S+L A Y+K
Sbjct: 240 SASAAEAPPSGNQ--LQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVK 297
Query: 386 ELRAKVDELEAKLRE-QAR 403
L +K+ ELE K RE +AR
Sbjct: 298 SLESKLSELEEKNRELEAR 316
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 333 PTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVD 392
P ++ L H+ +ER+RRE+LN F AL++V+P SK DKAS+L A +IK L +K+
Sbjct: 175 PAPPSDNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLS 234
Query: 393 ELEAKLRE-QAR 403
ELE K RE +AR
Sbjct: 235 ELEEKNRELEAR 246
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 148 (57.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 30/63 (47%), Positives = 46/63 (73%)
Query: 336 GRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
G+E ++EAER+RR RLN +ALR+VVP ++KM K + L+DA+ +IK L+ +V EL+
Sbjct: 59 GKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQ 118
Query: 396 AKL 398
+L
Sbjct: 119 RQL 121
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 141 (54.7 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKEL----RAKVDELEAKL 398
++ ER RR+RLN + +ALR+VVP ++KMDKAS++ DA+A+I++L R +DE+
Sbjct: 98 NIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISVLQ 157
Query: 399 REQARKSKVVYNVYDN 414
A + V +V D+
Sbjct: 158 SAAAVAATAVEDVDDS 173
Score = 49 (22.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 443 VDVKIVGSEAM-IRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRI 499
+ V VG + + + ++C AK+ + L V ASV++V T++ + V +
Sbjct: 234 LQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDGTIVHTMFVEV 291
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 153 (58.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 339 SPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKL 398
+P ++ AER+RR+RLN R LRS+VP +SKMD+ S+L D + Y+KEL ++ LE ++
Sbjct: 179 TPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEI 238
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 137 (53.3 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 315 FVSGFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKA 374
F SG + + +++GR + P ER+RR LN R+ AL+ ++P+ SK D+A
Sbjct: 192 FDSGIIEFSKEIRRKGRGKRKNK--PFT---TERERRCHLNERYEALKLLIPSPSKGDRA 246
Query: 375 SLLADAVAYIKELRAKVDELEAKLREQARKSKVVYNVYDNN 415
S+L D + YI ELR +V EL+ + + + N D+N
Sbjct: 247 SILQDGIDYINELRRRVSELKYLVERKRCGGRHKNNEVDDN 287
Score = 59 (25.8 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 440 IMDVDVKIVGSEAMIRV-QCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVR 498
+ +VDV+IV E I+V Q IN + VL L+ +HH + + E +
Sbjct: 337 VTEVDVRIVDDEVTIKVVQKKKINC-LLLVSKVLDQLQLDLHHVAGGQIGEHYSFLFNTK 395
Query: 499 IPEGLISEEVIRSAIFQRM 517
I EG + SAI R+
Sbjct: 396 IYEG---STIYASAIANRV 411
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 111 (44.1 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 320 TDINVTSK-KRGRKPTSGRE---SPLNHVEAERQRRERLNHRFYALRSVVPN--VSKMDK 373
T V SK KR R + E + H+ ER RR+++N LRS++P V + D+
Sbjct: 172 TKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQ 231
Query: 374 ASLLADAVAYIKELRAKVDELEAKLREQ 401
AS++ A+ +++EL + LE++ R +
Sbjct: 232 ASIIGGAIEFVRELEQLLQCLESQKRRR 259
Score = 86 (35.3 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 440 IMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRI 499
+ DV+VK++G +AMI++ K + L DL + H +++++ +T+L V+I
Sbjct: 315 LADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKI 374
Query: 500 P-EGLISEEVIRSAIFQ 515
E + E I S+I Q
Sbjct: 375 TSETRFTAEDIASSIQQ 391
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 26/53 (49%), Positives = 44/53 (83%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKL 398
+ER+RR R+ + YALRS+VPN++KMDKAS++ DAV Y++EL+++ +L++ +
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDI 187
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 336 GRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDE 393
G + +H EAER+RR+R+N LR++VP+ S+MDKA+LL + V +++ELR + D+
Sbjct: 16 GSPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADD 73
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 113 (44.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 338 ESPLNHVEAERQRRERLNHRFYALRSVVP--NVSKMDKASLLADAVAYIKELRAKVDELE 395
+ ++HV ER RR+++N LRS++P V + D+AS++ V YI EL+ + LE
Sbjct: 99 QQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Query: 396 AK 397
AK
Sbjct: 159 AK 160
Score = 81 (33.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 440 IMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRI 499
+ DV+VK G+ +++ I K++ L DL + ++++V ETML ++I
Sbjct: 285 LADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKI 344
Query: 500 P-EGLISEEVIRSAIFQ 515
E +S E + I Q
Sbjct: 345 GIECQLSAEELAQQIQQ 361
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
++R R P + +E HV AER+RRE+L +F AL ++VP + K DK SLL + Y+K+
Sbjct: 276 ERRSRPPANAQE----HVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQ 331
Query: 387 LRAKVDELEAKLREQA 402
L KV LE R A
Sbjct: 332 LEEKVKALEEGSRRTA 347
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/171 (23%), Positives = 88/171 (51%)
Query: 331 RKPTS-GRESPL---NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
RK S G SP+ HV AER+RRE+L+ +F AL +++P + K DK ++L DA++ +K+
Sbjct: 104 RKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQ 163
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVK 446
L+ ++ L+ + +E R+ + + V + H+ + + +++ K
Sbjct: 164 LQEQLRTLKEE-KEATRQMESMILVKKSKVFFDEEPNLSCSPSV--HIEFDQALPEIEAK 220
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVV 497
I ++ +IR+ C +++ + + + + ++ V ++ L D+ V
Sbjct: 221 ISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTL-DITV 270
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 145 (56.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 323 NVTSKKRGRK--PTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
N K +K PT +S ++ +ER+RRER+N Y LR+VVP ++K++K + +DA
Sbjct: 245 NANDSKANKKLLPTENFKS--KNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDA 302
Query: 381 VAYIKELRAKVDELEAKLR 399
V YI EL + +LE +L+
Sbjct: 303 VDYINELLVEKQKLEDELK 321
Score = 48 (22.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 170 ARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKS 208
++M T V V + G+VEL + D+ D S+V L S
Sbjct: 122 SKMEMFSTRVLVPVSDGLVELFAFDMRPFDESMVHLIMS 160
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 41/183 (22%), Positives = 88/183 (48%)
Query: 327 KKRGRKPTSGRESP-LNHVEAERQRRERLNHRFYALRSVVP-NVSKM-DKASLLADAVAY 383
++R K +E+ +NH+ ER RR+++NH L+S++P + S+ D+AS++ ++Y
Sbjct: 87 RRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISY 146
Query: 384 IKELRAKVDELEAKLRE-QARKSKVVYN------VYDNNQXXXXXXXXXXXXXXXHHLGI 436
+K+L ++ LEA+L+ + +S +++ Y HH +
Sbjct: 147 LKKLEQRLQSLEAQLKATKLNQSPNIFSDFFMFPQYSTATATATATASSSSSSHHHHKRL 206
Query: 437 NINIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVV 496
+ + DV+V +V A I+V K+++ L H ++++ ++ L
Sbjct: 207 EV-VADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFS 265
Query: 497 VRI 499
V++
Sbjct: 266 VKV 268
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 136 (52.9 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 31/89 (34%), Positives = 52/89 (58%)
Query: 315 FVSGFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKA 374
F + + N ++GR R SP ER+RR N RF+ L++++PN +K+D+A
Sbjct: 225 FENEILEFNNGVTRKGRGSRKSRTSP-----TERERRVHFNDRFFDLKNLIPNPTKIDRA 279
Query: 375 SLLADAVAYIKELRAKVDELEAKLREQAR 403
S++ +A+ YIKEL ++E + L E+ R
Sbjct: 280 SIVGEAIDYIKELLRTIEEFKM-LVEKKR 307
Score = 54 (24.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 440 IMDVDVKIVGSEAMIR-VQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRE 489
+ +VDV+I+ E I+ VQ IN VL L+ +HH + + E
Sbjct: 367 VTEVDVRIIDDEVTIKLVQKKKINC-LLFTTKVLDQLQLDLHHVAGGQIGE 416
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 141 (54.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 325 TSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYI 384
+S GR T R + H EAER+RRER+N LR ++P+ +MDKA+LLA V +
Sbjct: 52 SSSGSGRSATEARALKI-HSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQV 110
Query: 385 KELRAKVDEL 394
K+L+ K E+
Sbjct: 111 KDLKRKASEI 120
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 112 (44.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYIKELRAKVDELEA-K 397
++H+ ER RR ++N LRS+ P + + D+AS++ A+ +IKEL+ + LEA K
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 398 LREQARKSKVV 408
R Q ++ ++
Sbjct: 61 KRRQQPQAHLI 71
Score = 68 (29.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 15/63 (23%), Positives = 34/63 (53%)
Query: 437 NINIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVV 496
N + DV+ +I G+ ++R P +++ +L L V H +++++ +T+L V
Sbjct: 134 NSPMADVEARISGANVLLRTLSR--RAPPVRIIALLESLHLEVLHLNITTMDDTVLYSFV 191
Query: 497 VRI 499
++I
Sbjct: 192 LKI 194
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 116 (45.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 327 KKRGRKPTS--GRESP----LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLA 378
KKR R+ S RE + H+ ER RR ++N LRS++P V + D+AS++
Sbjct: 70 KKRRRRAKSCKSREETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVG 129
Query: 379 DAVAYIKELRAKVDELEAKLR 399
A+ ++KEL ++ LEA+ R
Sbjct: 130 GAIEFVKELEQQLQSLEAQKR 150
Score = 72 (30.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 440 IMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRI 499
+ D++V +V + A +RV P K++ L+ L V H +V+++ +L + V++
Sbjct: 258 LADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVLYTLSVKV 317
Query: 500 PEG--LISEEVIRSAI 513
EG L + + I +A+
Sbjct: 318 EEGCSLTTVDDIAAAV 333
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 144 (55.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELR 388
+H EAER+RRER+N+ LRS++PN +K DKASLLA+ + ++KEL+
Sbjct: 177 SHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELK 223
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 143 (55.4 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
+H EAER+RRER+N LRS++PN +K DKASLLA+ + ++KEL+ + ++
Sbjct: 135 SHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI 187
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 136 (52.9 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAK 390
+H EAER+RRER+N LR +VP+ S+MDKA+LL + V Y+++LR++
Sbjct: 31 SHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSE 79
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/192 (27%), Positives = 88/192 (45%)
Query: 336 GRESPLNHV-EAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
GR S + ER+RR RF L++++PN +K D+AS++ +A+ YIKEL +DE
Sbjct: 209 GRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEF 268
Query: 395 EAKLREQA--RKSKVVYNVYDNNQXXXXXXXXXXXXXXXHH------LGININIMDVDVK 446
+ + ++ ++++ +V D N ++ L DVDV+
Sbjct: 269 KLLVEKKRVKQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDVR 328
Query: 447 IVGSEAMIR-VQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLIS 505
I+ E I+ VQ IN + V+ LE +HH + + + E +I EG
Sbjct: 329 IIDDEVTIKIVQKKKINC-LLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEG--- 384
Query: 506 EEVIRSAIFQRM 517
V SAI R+
Sbjct: 385 SSVYASAIADRV 396
>UNIPROTKB|Q5JNS0 [details] [associations]
symbol:P0706B05.43 "Os01g0293100 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002482 RefSeq:NP_001042795.1 UniGene:Os.54828 GeneID:4325164
KEGG:osa:4325164 HOGENOM:HOG000071096 OMA:HPQCELL
ProtClustDB:CLSN2691354 Uniprot:Q5JNS0
Length = 379
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/102 (36%), Positives = 61/102 (59%)
Query: 315 FVSGFTDINVTSKKRGRKPTSGRES--PLNHVEA-ERQRRERLNHRFYALRSVVPNVSKM 371
F S T + +KR R T+G P N VE E+QRR RL ++ AL ++PN +K
Sbjct: 148 FESSPTPRSGGGRKRSRA-TAGFHGGGPANGVEKKEKQRRLRLTEKYNALMLLIPNRTKE 206
Query: 372 DKASLLADAVAYIKELRAKVDELEAKLREQARKSKVVYNVYD 413
D+A++++DA+ YI+EL V+EL + ++ R+ ++ +V D
Sbjct: 207 DRATVISDAIEYIQELGRTVEELTLLVEKKRRRREMQGDVVD 248
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 338 ESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAK 397
+SP ++EAER+RRE+L+ R ALRS VP V+ M KAS++ DA+ YI EL+ V L
Sbjct: 30 KSP--NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLET 87
Query: 398 LREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVKIVGSEAMIRVQ 457
E + + + LGI N+ KI + +++
Sbjct: 88 FHEMEEAPPEI-DEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLC--KIGERKFWLKII 144
Query: 458 CPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISEEVIRSAIFQRM 517
+ K M+V+R L F + S+++ +L V+ E L E + + + M
Sbjct: 145 TEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQTQE-LCDVEQTKDFLLEVM 203
Query: 518 QN 519
++
Sbjct: 204 RS 205
>UNIPROTKB|Q6YW41 [details] [associations]
symbol:B1131G07.17 "Basic helix-loop-helix (BHLH) family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005797 ProteinModelPortal:Q6YW41
Gramene:Q6YW41 HOGENOM:HOG000083084 Uniprot:Q6YW41
Length = 745
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 333 PTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVD 392
PTS S L+H+ +ER+RRERLN F LR ++P SK DKA++LA + Y+ L A++
Sbjct: 508 PTS---SQLHHMISERRRRERLNESFEHLRGLLPPGSKKDKATVLAKTLEYMNLLIAQIS 564
Query: 393 ELEAKLR 399
ELEAK R
Sbjct: 565 ELEAKNR 571
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 26/55 (47%), Positives = 40/55 (72%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEA 396
+H EAER+RR+R+N LRS++PN +K DKASLLA+ + ++KEL+ + + A
Sbjct: 109 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAA 163
>UNIPROTKB|Q6ZGM4 [details] [associations]
symbol:OJ1442_E05.19 "cDNA clone:006-303-B03, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG277469
EMBL:AP004121 EMBL:EU837263 EMBL:HQ858854 EMBL:AK060881
EMBL:AK103434 EMBL:AK104188 RefSeq:NP_001045680.1 UniGene:Os.17893
EnsemblPlants:LOC_Os02g02480.1 EnsemblPlants:LOC_Os02g02480.3
GeneID:4328080 KEGG:osa:4328080 OMA:AIFCDGG Uniprot:Q6ZGM4
Length = 236
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 316 VSGFT---DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVV-PNV-SK 370
VSG T D +V K RGR +S P + E+ RR+RLN RF L SV+ P+ +K
Sbjct: 43 VSGDTCCLDQSVLGK-RGRDESSS-SGPKSKACREKIRRDRLNDRFLELSSVINPDKQAK 100
Query: 371 MDKASLLADAVAYIKELRAKVDELEA---KLREQARKSKVVYN 410
+DKA++L+DA + ELR + ++L+ KLRE + KV N
Sbjct: 101 LDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKN 143
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
+H EAER+RR+R+N LRS++PN +K DKASLLA+ + ++KEL+ + +
Sbjct: 124 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAM 176
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 339 SPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
S L H+ +ER+RRE+LN F+ LRS++P SK DK ++L +A Y+K L ++ ELE
Sbjct: 263 SQLYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEITELE 319
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 116 (45.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 326 SKKRGR-KPTSGRESPLNHVE-AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAY 383
+KK R K G+ S + ER+RR N RF+ L++++PN +K +AS++ D + Y
Sbjct: 5 TKKNERFKAEEGKGSKKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVY 64
Query: 384 IKELRAKVDELE 395
I EL+ V EL+
Sbjct: 65 INELQRLVSELK 76
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/170 (23%), Positives = 74/170 (43%)
Query: 327 KKRGRKPTSGRES----PLNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADA 380
K+R KPT E + H+ ER RR ++N +LRS++P+ + + D+AS++ A
Sbjct: 175 KRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGA 234
Query: 381 VAYIKELRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININI 440
+ ++K L ++ LEA+ R Q DN+ + I
Sbjct: 235 IDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI-- 292
Query: 441 MDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRET 490
+ ++ S +++QC + + +L L F V H +++S T
Sbjct: 293 ---EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNT 339
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 114 (45.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 343 HVEAERQRRERLNHRFYALRSVVP--NVSKMDKASLLADAVAYIKELRAKVDELEAKLRE 400
H+ ER RR+++N LRS++P V + D+AS++ V YIKEL+ + LEAK +
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
Query: 401 QARKSKVV 408
+ +V+
Sbjct: 199 KVYTDQVL 206
Score = 66 (28.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 434 LGININIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQ 493
LG + + DV V+ G+ +++ A K++ L + HA +S+V +T +
Sbjct: 311 LGGGLLLPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVN 370
Query: 494 DVVVRIP-E-GLISEEVIR 510
V+I E L +EE+++
Sbjct: 371 SFTVKIGIECELSAEELVQ 389
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 329 RGRKPTSGRESPLN-HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKEL 387
R +P R H +E++RR R+N + AL+S++PN SK DKAS+L DA+ Y+K+L
Sbjct: 22 RPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQL 81
Query: 388 RAKVDELEAK 397
+ +V L +
Sbjct: 82 QLQVQMLSMR 91
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+ GR+ GR + + H E+ER+RR+R+N R L+ ++P SK DK S+L D + ++K+
Sbjct: 159 RSNGRR---GRAAAI-HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQ 214
Query: 387 LRAKVD--ELEAKLREQ 401
L+A+V L A L +Q
Sbjct: 215 LQAQVQFMSLRANLPQQ 231
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRA 389
+H EAER+RRER+N LR++VP KMDKA+LLA+ V ++K+L++
Sbjct: 81 SHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLKS 128
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 42/201 (20%), Positives = 88/201 (43%)
Query: 327 KKRGRKPTSGRE---SPLNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAV 381
+KR R P + E + H+ ER RR ++N +LRS++P + + D+AS++ A+
Sbjct: 98 RKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAI 157
Query: 382 AYIKELRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININI- 440
+IKEL + LEA+ R+ ++ G
Sbjct: 158 DFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFG 217
Query: 441 ----MDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVV 496
+V+ ++ + ++V+C K + + +L+ + H ++SS + ++
Sbjct: 218 GGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFN 277
Query: 497 VRIPEG--LISEEVIRSAIFQ 515
+++ +G L S + I +A+ Q
Sbjct: 278 LKMEDGCKLGSADEIATAVHQ 298
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 123 (48.4 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 331 RKPTSGRESPLN--HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELR 388
R+PT R S H +ER+RR+R+N + AL+ ++PN +K DK S+L +A+ Y+K L+
Sbjct: 4 RRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQ 63
Query: 389 AKVDEL 394
++ L
Sbjct: 64 LQLQML 69
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 326 SKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIK 385
S GR + + H EAER+RRER+N LR ++P+ +MDKA+LLA V +K
Sbjct: 53 SSSSGRSAAAQATAMTIHSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVK 112
Query: 386 ELRAKVDE 393
L+ + E
Sbjct: 113 HLKTRATE 120
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 323 NVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVA 382
+V +RG K G+ + ER+RRE+LN +F LR + PN +K D+AS++ DA+
Sbjct: 247 SVLECRRG-KGEFGKGKGKANFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIE 305
Query: 383 YIKELRAKVDELEAKLREQAR 403
YI EL V EL+ L EQ R
Sbjct: 306 YIDELNRTVKELKI-LVEQKR 325
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 119 (46.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVP--NVSKMDKASLLADAVAYIKELRAKVDELEAKL 398
++H+ ER RR+++N LRS++P V + D+AS++ V YIKEL+ + LEAK
Sbjct: 132 MSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKK 191
Query: 399 REQARKSKVV 408
+A +V+
Sbjct: 192 NRKAYADQVL 201
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 435 GININIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRE-TMLQ 493
GI + + DV V+ G +++ A K++ L L + H S+ +V + T+L
Sbjct: 332 GI-VGVPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLS 390
Query: 494 DVV-VRIPEGLISEEVIR 510
+ + I L +EE+++
Sbjct: 391 FTIKIGIECELSAEELVQ 408
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 327 KKRGRKP---TSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAY 383
KK G K T + H ++ER+RR+++N R L+ +VPN SK DKAS+L + + Y
Sbjct: 199 KKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEY 258
Query: 384 IKELRAKV 391
+K+L+A+V
Sbjct: 259 LKQLQAQV 266
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/167 (23%), Positives = 77/167 (46%)
Query: 327 KKRGRKPTSGRES----PLNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADA 380
K+R KP+ E +NH+ ER RR ++N +LR+++P + + D+AS++ A
Sbjct: 160 KRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGA 219
Query: 381 VAYIKELRAKVDELEAKLR-EQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININ 439
+ Y+K L + LE++ R +Q S+VV N ++ L
Sbjct: 220 INYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTT-------LEDQTC 272
Query: 440 IMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
I ++ ++ + ++VQC K + L L+ V H ++++
Sbjct: 273 IPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITT 319
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDE 393
+H AE++RR+R+N ALR +VPN K+DKA+LLA + +KEL+ K E
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117
>TAIR|locus:2042551 [details] [associations]
symbol:CPUORF7 "conserved peptide upstream open reading
frame 7" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0048364 EMBL:AC006593
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AJ576042
EMBL:AY129831 EMBL:AY231425 EMBL:AY954808 EMBL:AK221935
IPI:IPI00523241 IPI:IPI00543072 IPI:IPI00657578 PIR:G84718
RefSeq:NP_001031453.1 RefSeq:NP_001031454.1 RefSeq:NP_180686.2
UniGene:At.43376 PRIDE:Q58G01 EnsemblPlants:AT2G31280.1
GeneID:817685 KEGG:ath:AT2G31280 TAIR:At2g31280
HOGENOM:HOG000137502 InParanoid:Q58G01 OMA:AGSELHE PhylomeDB:Q58G01
ProtClustDB:CLSN2679947 Genevestigator:Q58G01 Uniprot:Q58G01
Length = 720
Score = 100 (40.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 26/83 (31%), Positives = 50/83 (60%)
Query: 133 FAIGDGSVLGRVFSSGDYVWLTGDHELQL---YECERVKEARMH-GIQTLVCVSTA-CGV 187
+++G+G ++G+V SG++ W+ ++ +E V E+++ GI+T++ V+ CGV
Sbjct: 68 YSLGEG-IVGQVAVSGEHQWVFPENYNNCNSAFEFHNVWESQISAGIKTILVVAVGPCGV 126
Query: 188 VELGSSDLIKEDWSLVQLAKSLF 210
V+LGS + ED + V + LF
Sbjct: 127 VQLGSLCKVNEDVNFVNHIRHLF 149
Score = 62 (26.9 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 25/84 (29%), Positives = 37/84 (44%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
DI +KKR + S R P + R+ + R LR +VPN SK SLL
Sbjct: 535 DIPKKNKKRAKPGESSRPRPRD--------RQLIQDRIKELRELVPNGSKCSIDSLLERT 586
Query: 381 VAYIKELRAKVDELEAKLREQARK 404
+ ++ L+ E KL + A +
Sbjct: 587 IKHMLFLQNVTKHAE-KLSKSANE 609
Score = 60 (26.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 39 WVYSIFWQPLKDVNGRLVLSWGDGYF 64
W Y++FWQ L R+VL+ D Y+
Sbjct: 18 WDYAVFWQ-LNHRGSRMVLTLEDAYY 42
>UNIPROTKB|Q5N9E6 [details] [associations]
symbol:P0505D12.13 "BHLH transcription factor-like protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 InterPro:IPR025610 Pfam:PF14215 EMBL:AP008207
EMBL:AP003270 EMBL:AK068033 RefSeq:NP_001044899.2 UniGene:Os.14287
EnsemblPlants:LOC_Os01g64560.1 GeneID:4324795 KEGG:osa:4324795
Uniprot:Q5N9E6
Length = 904
Score = 124 (48.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 47/186 (25%), Positives = 81/186 (43%)
Query: 39 WVYSIFWQPLKDVNG-RLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVS 97
W Y++FW+ + + RL L WGDG++ RAA +G E L+ K +
Sbjct: 20 WSYAVFWRATRAADSQRLKLVWGDGHYE-------RAAGAPSISGFEA-MDLLLKEKAAA 71
Query: 98 KEVQVHFGEDMDLDRMVDGDVTDGEWYYTVSVTRSFA-----IGDGSVLGRVFSSGDYVW 152
G DG V ++ A +G+G V+G+ +G + W
Sbjct: 72 LRSGTGRGGGGGEGHAADGAAGHSHDRVDALVHKAMAQQVHVVGEG-VIGQAALTGLHRW 130
Query: 153 LTGDHELQLYECERVKEARMH-------GIQTLVCVSTAC-GVVELGSSDLIKEDWSLVQ 204
+ H++ + ECE E + GIQT+ + GV++LGS+ ++ E+ + +
Sbjct: 131 IV--HDI-VDECEEEDEVLLEMKGQFCAGIQTIAVIPVLPRGVIQLGSTKMVMEEAAFID 187
Query: 205 LAKSLF 210
+SLF
Sbjct: 188 HVRSLF 193
Score = 58 (25.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
+I +++KR R S R P + R+ + R LR +VPN +K +LL
Sbjct: 685 EIGKSNRKRSRPGESARPRPKD--------RQMIQDRIKELREIVPNSAKCSIDTLLEKT 736
Query: 381 VAYIKELR--AK-VDELE 395
+ ++ L+ AK D+L+
Sbjct: 737 IKHMLFLQNVAKHADKLK 754
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+K G + T + H +ER+RR+R+N + AL+ ++PN +K+DKAS+L +A+ Y+K
Sbjct: 301 RKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKT 360
Query: 387 LRAKV 391
L+ +V
Sbjct: 361 LQLQV 365
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 330 GRKPTSGRESP-LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELR 388
G + TSG + L H+ +ER+RRE+LN F ALRS++P +K DKAS+L+ A + L+
Sbjct: 276 GGRYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQ 335
Query: 389 AKVDELEAKLREQARK 404
++ +L + RE K
Sbjct: 336 GEISKLLERNREVEAK 351
>TAIR|locus:2157538 [details] [associations]
symbol:ILR3 "AT5G54680" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022214
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000238732 UniGene:At.49177
UniGene:At.9639 EMBL:AF488629 EMBL:AY054585 EMBL:BT002189
EMBL:AY086197 IPI:IPI00530460 RefSeq:NP_200279.1
ProteinModelPortal:Q9FH37 SMR:Q9FH37 IntAct:Q9FH37 STRING:Q9FH37
EnsemblPlants:AT5G54680.1 GeneID:835557 KEGG:ath:AT5G54680
TAIR:At5g54680 eggNOG:NOG277469 InParanoid:Q9FH37 OMA:MASPEGT
PhylomeDB:Q9FH37 ProtClustDB:CLSN2916456 Genevestigator:Q9FH37
Uniprot:Q9FH37
Length = 234
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/97 (36%), Positives = 57/97 (58%)
Query: 326 SKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVV-P-NVSKMDKASLLADAVAY 383
SKKRGR +S S + E+QRR+RLN +F L +++ P N K DKA++L DAV
Sbjct: 61 SKKRGRCESSSATS--SKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRM 118
Query: 384 IKELRAKVDELE---AKLREQARKSKVVYN-VYDNNQ 416
+ +LR + +L+ + L+++ ++ K N + D Q
Sbjct: 119 VTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQ 155
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 120 (47.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 24/71 (33%), Positives = 46/71 (64%)
Query: 327 KKRGRKPTSGRESPLN---HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAY 383
K+ G K + + ++ H +E++RR ++N + AL+ ++PN +K DKAS+L +A+ Y
Sbjct: 79 KRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEY 138
Query: 384 IKELRAKVDEL 394
+K+L+ +V L
Sbjct: 139 LKQLQLQVQTL 149
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 42/184 (22%), Positives = 84/184 (45%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYIKELRAKVDELEAK- 397
+ H+ ER RR+++N LRS++P+ + D+AS++ A+ Y+KEL + +E K
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174
Query: 398 LREQARKS-KVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVDVKIVGSEAMIRV 456
R K K + + + +++V + S A I++
Sbjct: 175 TRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANIKI 234
Query: 457 QCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEG--LISEEVIRSAIF 514
KL+ L+ L + H +V+++ ++L + VR+ EG L + + I +A+
Sbjct: 235 MTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATALN 294
Query: 515 QRMQ 518
Q ++
Sbjct: 295 QTIR 298
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 124 (48.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 330 GRKPTSGRESPLN-----HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYI 384
G +P G S + H +E++RR ++N + AL+S++PN +K DKAS+L +A+ Y+
Sbjct: 90 GARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYL 149
Query: 385 KELRAKVDELEAK 397
K+L+ +V L +
Sbjct: 150 KQLQLQVQMLSMR 162
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
H +E++RR R+N + AL+S++PN +K DKAS+L +A+ Y+K+L+ +V L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 120 (47.3 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 322 INVTSK--KRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLAD 379
++ TSK KR K G S + A R+RRER+N R L+S+VPN +K+D +++L D
Sbjct: 121 VSNTSKSLKRKAKANRGIASDPQSLYA-RKRRERINDRLKTLQSLVPNGTKVDISTMLED 179
Query: 380 AVAYIKELRAKVDELEAK 397
AV Y+K L+ ++ L ++
Sbjct: 180 AVHYVKFLQLQIKLLSSE 197
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 320 TDINVTSKKRGRKPTSGRESPLNHVE--AERQRRERLNHRFYALRSVVPNVSKMDKASLL 377
TD K ++ S R S V +ER+RR+R+N R AL+ ++P+ S+ DKAS+L
Sbjct: 236 TDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASIL 295
Query: 378 ADAVAYIKELRAKV 391
+A+ Y+K L+ ++
Sbjct: 296 DEAIDYLKSLQMQL 309
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 314 HFVSG-FTDINVTSKKRG--RKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSK 370
H V+G D V G R+P + + V A R+RR R++ RF LRS+VP SK
Sbjct: 26 HPVAGALGDSRVRGGGSGARRRPGAKLSTDPQSVAA-RERRHRISDRFRVLRSLVPGGSK 84
Query: 371 MDKASLLADAVAYIKELRAKVDELEAKLRE 400
MD S+L A+ Y+K L+ ++ +A L +
Sbjct: 85 MDTVSMLEQAIHYVKFLKTQISLHQAALMQ 114
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKV 391
H +ER+RR+R+N + AL+ ++PN +K+DKAS+L +A+ Y+K L+ +V
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 110 (43.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 327 KKRGRKPTSGRESP-LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAY 383
+ R K ES + H+ ER RR ++N LRS++P V + D+AS++ A+ +
Sbjct: 80 RARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDF 139
Query: 384 IKELRAKVDELEAKLR 399
+KEL + LEA+ R
Sbjct: 140 VKELEQLLQSLEAQKR 155
Score = 54 (24.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 440 IMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVR 498
+ D++V +V + A IRV K++ L+ L V H +V+++ L + V+
Sbjct: 234 VADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALYSISVK 292
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 328 KRGRKPTSGRESPLNHVE--AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIK 385
K ++ S R S V +ER+RR+R+N R AL+ ++P+ SK DKAS+L +A+ Y+K
Sbjct: 245 KSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLK 304
Query: 386 ELRAKV 391
L+ ++
Sbjct: 305 SLQLQL 310
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 33/94 (35%), Positives = 49/94 (52%)
Query: 323 NVTSKKRGRKPT--SGRESPLN----HVEAERQRRERLNHRFYALRSVVPN--VSKMDKA 374
N K+R RKP E N H+ ER RR ++N LRS++P K D+A
Sbjct: 64 NRGKKRRRRKPRVCKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQA 123
Query: 375 SLLADAVAYIKELRAKVDELEAKLREQARKSKVV 408
S++ A+ +IKEL K+ LEA+ A+ ++ V
Sbjct: 124 SIVGGAIDFIKELEHKLLSLEAQKHHNAKLNQSV 157
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 466 AKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEG--LISEEVIRSAI 513
+KL+ L+ L + H SV+++ + + ++ E L S + I A+
Sbjct: 243 SKLVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAV 292
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQARKS 405
A RQRRER++ + L+++VP +KMD AS+L +A Y+K LRA+V LE LR + ++
Sbjct: 283 AARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE-NLRPKLDQT 341
Query: 406 KVVYN 410
+ ++
Sbjct: 342 NLSFS 346
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 24/63 (38%), Positives = 43/63 (68%)
Query: 331 RKPTSGRESPLNHVE--AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELR 388
++P + R + V +ER+RR+R+N + AL+ +VP+ +K DKAS+L +A+ Y+K L+
Sbjct: 219 KRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQ 278
Query: 389 AKV 391
+V
Sbjct: 279 MQV 281
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDE 393
NH EAER+RRER+N LR+V+ SK DKA+LLA V ++EL+ + E
Sbjct: 70 NHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLE 121
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQARKS 405
A R RRER++ R L+ +VP +KMD AS+L +A +Y+K L+++V +LE L S
Sbjct: 289 AARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLET-LGTTTTTS 347
Query: 406 KVVYNVYDNN 415
K+ Y N
Sbjct: 348 KLPQQYYSGN 357
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 36/163 (22%), Positives = 69/163 (42%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYI 384
+KR +KP + H+ ER RR +N +LRS++P+ + + D+A+++ A+ Y+
Sbjct: 104 EKR-KKPEEAENQRMTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYV 162
Query: 385 KELRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHHLGININIMDVD 444
K+L ++ L+A E++ V + G+++
Sbjct: 163 KQLEQQLVALQAAAAERSGVGVVAAAATAASDGVFVSPQYTSYSEARGGSGVDVEA---- 218
Query: 445 VKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSV 487
VG +RV + + + DL V H +V+SV
Sbjct: 219 TAAVGGHVRVRVAGRRWTGRLVRAVAAMEDLRLTVLHLAVTSV 261
>UNIPROTKB|Q69JI7 [details] [associations]
symbol:OSJNBa0026C08.39-1 "BHLH protein family-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 EMBL:EU837261 EMBL:AP006169
EMBL:AP005759 RefSeq:NP_001063459.1 UniGene:Os.16741
EnsemblPlants:LOC_Os09g29930.1 GeneID:4347359 KEGG:osa:4347359
OMA:HNIVTSA ProtClustDB:CLSN2697427 Uniprot:Q69JI7
Length = 504
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 331 RKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVS-KMDKASLLADAVAYIKELRA 389
++P+S R H E++RR ++N RF LR ++P+ K DKA+ L + + YI+ L+
Sbjct: 213 QRPSSPRSK---HSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFLQE 269
Query: 390 KVDELEAKLRE-QARKSKVV--YNVY 412
KV + EA + E +K++ N+Y
Sbjct: 270 KVQKFEASVPEWNQENAKILPWSNIY 295
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 20/43 (46%), Positives = 33/43 (76%)
Query: 349 QRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKV 391
+RR+R+N + L+ +VPN SK DKAS+L + + Y+K+L+A+V
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQV 54
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 112 (44.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 327 KKRGRKPTSGRESP----LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADA 380
K+R + RE + H+ ER RR+++N LRS++P V + D+AS++ A
Sbjct: 122 KRRRARTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGA 181
Query: 381 VAYIKELRAKVDELEAKLREQARKSK 406
+ Y+KE+ + LEA AR+++
Sbjct: 182 INYVKEMEQLLQSLEA--HRHARRAR 205
Score = 47 (21.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 439 NIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFH---VHHASVSSVRETMLQDV 495
++ D++V +V S A ++V P +L+ ++ L+ H V H +V+S L +
Sbjct: 267 SVADIEVTMVESHANLKVLSR--RRPR-QLLRMVAGLQHHRLAVLHLNVASAGHMALYSL 323
Query: 496 VVRIPEG--LISEEVIRSAI 513
+++ E L S + I +A+
Sbjct: 324 SLKVEEDCQLTSVDDIAAAV 343
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
D TSK + R P + + A R+RRER+N R L+++VPN +K+D +++L +A
Sbjct: 207 DAGATSKGKSRAGRGAATDPQS-LYA-RKRRERINERLKTLQNLVPNGTKVDISTMLEEA 264
Query: 381 VAYIKELRAKVDELEAKLREQARKSKVVYN 410
V Y+K L+ ++ L + E + + YN
Sbjct: 265 VHYVKFLQLQIKLLSSD--EMWMYAPIAYN 292
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 322 INVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAV 381
I T + RG + H AER+RRE++N R L+ ++P +K K S+L D +
Sbjct: 134 IQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVI 193
Query: 382 AYIKELRAKVDE 393
Y+K L ++++
Sbjct: 194 EYVKSLEMQINQ 205
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 322 INVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAV 381
++ TS KR R H +ER+RR+R+N R AL+ ++P +K DKAS+L +A+
Sbjct: 275 VSTTSTKRSRAAEV-------HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAI 327
Query: 382 AYIKELRAKV 391
Y+K L+ ++
Sbjct: 328 EYMKSLQLQI 337
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 119 (46.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 41/202 (20%), Positives = 89/202 (44%)
Query: 327 KKRGRKPTSGRESPLN----HVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADA 380
K+R + + +E N H+ ER RR+++N LRS++P + D+AS++ A
Sbjct: 107 KRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGA 166
Query: 381 VAYIKELRAKVDELEAKLREQARKSKVVYNVYDNNQXXXXXXXXXXXXXXXHH-----LG 435
+ Y+KEL + +E ++ + ++ +
Sbjct: 167 INYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAA 226
Query: 436 ININIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDV 495
+ +++V +V S A +++ KL+ ++ L + H +V++ +++L +
Sbjct: 227 AAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSI 286
Query: 496 VVRIPEG--LISEEVIRSAIFQ 515
V++ EG L + E I +A+ Q
Sbjct: 287 SVKVEEGSQLNTVEDIAAAVNQ 308
Score = 37 (18.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 135 IGDGSVLGRVFSSGDYVWLTGDH 157
+G G G F+S +Y TGD+
Sbjct: 45 LGQGQ--GHGFASNNYNGRTGDY 65
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 119 (46.9 bits), Expect = 0.00057, P = 0.00057
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 343 HVEAERQRRERLNHRFYALRSVVP-NVSKMDKASLLADAVAYIKELRAKVDELEAKLRE- 400
H E++RR ++N RF LR ++P N K DKAS L + + YI+ L+ KV + E E
Sbjct: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEW 285
Query: 401 QARKSKVV--YNVY 412
+KVV N+Y
Sbjct: 286 NQENAKVVPWTNIY 299
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 113 (44.8 bits), Expect = 0.00067, P = 0.00067
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
A R RRER++ R L+ +VP +KMD AS+L +A+ Y+K L+ +V LE
Sbjct: 165 AARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00068
Identities = 22/74 (29%), Positives = 45/74 (60%)
Query: 320 TDINVTSKKRGRKPTSGRES--PLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLL 377
T++ + R TS + S + H +ER+RR+++N AL+ ++P +K D++S+L
Sbjct: 257 TNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSML 316
Query: 378 ADAVAYIKELRAKV 391
D + Y+K L++++
Sbjct: 317 DDVIEYVKSLQSQI 330
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
A R RRER++ R L+ +VP +KMD AS+L +A+ Y+K L+ +V LE
Sbjct: 133 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 113 (44.8 bits), Expect = 0.00076, P = 0.00076
Identities = 26/74 (35%), Positives = 47/74 (63%)
Query: 323 NVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVA 382
+VTS K + T G + + A R+RRE++N R L+++VPN +K+D +++L +AV
Sbjct: 159 SVTSVKGKTRATKGTATDPQSLYA-RKRREKINERLKTLQNLVPNGTKVDISTMLEEAVH 217
Query: 383 YIKELRAKVDELEA 396
Y+K L+ ++ L +
Sbjct: 218 YVKFLQLQIKLLSS 231
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 112 (44.5 bits), Expect = 0.00079, P = 0.00078
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
A R RRER++ R L+ +VP +KMD AS+L +A+ Y+K L+++V LE
Sbjct: 155 AARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLE 204
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 324 VTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAY 383
V K R R P H AER RRER+ R +L+ +VPN +K DKAS+L + + Y
Sbjct: 93 VRQKPRVRARRGQATDP--HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEY 150
Query: 384 IKELRAKVDEL 394
++ L+ +V L
Sbjct: 151 VRFLQLQVKVL 161
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 112 (44.5 bits), Expect = 0.00083, P = 0.00083
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
A R RRER++ R L+ +VP +KMD AS+L +A+ Y+K L+ +V LE
Sbjct: 136 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 329 RGRKPTSGRESPLN-HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKEL 387
R RKP + R+ H ER+RR+ N + AL+ ++PN K DKASLL +A+ Y++ L
Sbjct: 219 RTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTL 278
Query: 388 RAKV 391
+ +V
Sbjct: 279 QLQV 282
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 519 464 0.00097 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 116
No. of states in DFA: 616 (65 KB)
Total size of DFA: 279 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.61u 0.13s 36.74t Elapsed: 00:00:02
Total cpu time: 36.62u 0.13s 36.75t Elapsed: 00:00:02
Start: Mon May 20 16:44:30 2013 End: Mon May 20 16:44:32 2013
WARNINGS ISSUED: 1