BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010053
(519 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 268/545 (49%), Gaps = 73/545 (13%)
Query: 1 MEEIVSSSSSSYPMPFCQETSPTLQQRLQFIVQNRPEWWVYSIFWQP-LKDVNGRLVLSW 59
+E +++S S +P TL +RL ++ E W Y+IFW+P D +G VL W
Sbjct: 11 IEALLTSDPSPPLLPANLSLETTLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKW 70
Query: 60 GDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKV------SKEVQVHFGEDMDLDRM 113
GDG + G GNE K L RKK KE + + +++L M
Sbjct: 71 GDGVYTG---------------GNEEKTRGRLRRKKTILSSPEEKERRSNVIRELNL--M 113
Query: 114 VDGDV----------------TDGEWYYTVSVTRSFAIGDGSVLGRVFSSGDYVWLTGDH 157
+ G+ TD EW++ VS+T SF G G + G+ F+S + V +TG
Sbjct: 114 ISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFGNGSG-LAGKAFASYNPVLVTGSD 172
Query: 158 ELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLFGPVIATM 217
+ C+R K+ G+QT++C+ + GV+EL S++ I+ + L + LFG +
Sbjct: 173 LIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEEIRPNSDLFNRIRFLFGG--SKY 230
Query: 218 LTKQVNLNSE-SQLQLPNPTTRNNNNTNNVAPLLDIGMFSGAGAPHHHHHHHQKEWSLEE 276
+ N NSE QL + + N +P+ + ++ +
Sbjct: 231 FSGAPNSNSELFPFQLESSCSSTVTGNPNPSPV---------------YLQNRYNLNFST 275
Query: 277 NSKQQTREVSGDVIK-KEQLAAGFGRSSSDSGPSDSDGHFVSGFTDI--NVTSKKRGRKP 333
+S R GDV+ E + F + ++ SD + V T + KKRGRKP
Sbjct: 276 SSSTLARAPCGDVLSFGENVKQSFENRNPNTY-SDQIQNVVPHATVMLEKKKGKKRGRKP 334
Query: 334 TSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDE 393
GR+ PLNHVEAER RRE+LNHRFYALR+VVPNVSKMDK SLL DAV YI EL++K +
Sbjct: 335 AHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAEN 394
Query: 394 LEAKLREQARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVKIVGS-EA 452
+E + K + + + G +P+ +M ++VKI+ S +A
Sbjct: 395 VELE------KHAIEIQFNELKEIAGQRNAIPSVCKYEEKAS---EMMKIEVKIMESDDA 445
Query: 453 MIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISEEVIRSA 512
M+RV+ ++P A+LM+ L DLE V+HAS+S + + M+Q V++ + +E +R
Sbjct: 446 MVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEELRDL 505
Query: 513 IFQRM 517
+ ++
Sbjct: 506 LMSKI 510
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 244/544 (44%), Gaps = 72/544 (13%)
Query: 6 SSSSSSYPMPFCQETSPTLQQRLQFIVQNRPEW-------WVYSIFWQPLKDVNGRLVLS 58
++S+S+ + T TL ++L +V +W W Y+IFWQ +G+ VL
Sbjct: 30 ANSNSNQNLFLVMGTDDTLNKKLSSLV----DWPNSENFSWNYAIFWQQTMSRSGQQVLG 85
Query: 59 WGDGYFRGSKDFATRAAA-----GKQGAGNEPKFGFFLERKKVSKEVQVHFG-EDMDLDR 112
WGDG R + GA E RK+V +++ FG D D
Sbjct: 86 WGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDM---RKRVLQKLHRLFGGSDEDNYA 142
Query: 113 MVDGDVTDGEWYYTVSVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARM 172
+ VT E ++ S+ F G+G GR +SSG +VWL+ + C R A+
Sbjct: 143 LSLEKVTATEIFFLASMYFFFNHGEGGP-GRCYSSGKHVWLSDAVNSESDYCFRSFMAKS 201
Query: 173 HGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLF-----GPVIATMLT-------K 220
GI+T+V V T GV+ELGS + E+ LV+ ++LF PV+ T T K
Sbjct: 202 AGIRTIVMVPTDAGVLELGSVWSLPENIGLVKSVQALFMRRVTQPVMVTSNTNMTGGIHK 261
Query: 221 QVNLNSESQLQLPNPTTRNNNNTNNVAPLLDIGMFSGAGAPHHHHHHHQKEWSLEENS-- 278
+ P N P G + G + LE +
Sbjct: 262 LFGQDLSGAHAYPKKLEVRRNLDERFTPQSWEGYNNNKGPTFGYTPQRDDVKVLENVNMV 321
Query: 279 ------KQQTREVSGDVIKKEQLAAGFGRSSSDSGPSDSDGHFVSGFTDINVTSKK---- 328
K Q V + + S+S ++G ++V +K
Sbjct: 322 VDNNNYKTQIEFAGSSVAASSNPSTNTQQEKSESCTEKRPVSLLAGAGIVSVVDEKRPRK 381
Query: 329 RGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELR 388
RGRKP +GRE PLNHVEAERQRRE+LN RFYALRSVVPN+SKMDKASLL DA++YIKEL+
Sbjct: 382 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQ 441
Query: 389 AKVDELEAKLREQARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVKIV 448
KV K+ E R D + S +TI + S +VD++ +
Sbjct: 442 EKV-----KIMEDERVGT------DKSLSESNTITVEESP-------------EVDIQAM 477
Query: 449 GSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEG---LIS 505
E ++RV P ++PA++++ +R+ + A +S +TM V++ G L
Sbjct: 478 NEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNGSDPLTK 537
Query: 506 EEVI 509
E++I
Sbjct: 538 EKLI 541
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 133/191 (69%), Gaps = 5/191 (2%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
KKRGRKP +GRE PLNHVEAERQRRE+LN RFYALR+VVPNVSKMDKASLL DA+AYI E
Sbjct: 437 KKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINE 496
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVK 446
L++KV + E++ + + + V +++ S M +S S+ +G M+++VK
Sbjct: 497 LKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVG-----MEIEVK 551
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISE 506
I+G +AMIRV+ N+PAA+LM L DLE V+HAS+S V + M+Q V++ + ++
Sbjct: 552 IIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQ 611
Query: 507 EVIRSAIFQRM 517
E +R+++ ++
Sbjct: 612 EQLRASLISKI 622
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 118/199 (59%), Gaps = 13/199 (6%)
Query: 16 FCQETSPTLQQRLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAA 75
F QET LQQRLQ +++ E W Y+IFWQP D +G VL WGDGY++G +D
Sbjct: 63 FNQET---LQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEED-----K 114
Query: 76 AGKQGAGNEPKFGFFLE---RKKVSKEVQVHF-GEDMDLDRMVDGDVTDGEWYYTVSVTR 131
A + + P F + RKKV +E+ G D VD +VTD EW++ VS+T+
Sbjct: 115 ANPRRRSSSPPFSTPADQEYRKKVLRELNSLISGGVAPSDDAVDEEVTDTEWFFLVSMTQ 174
Query: 132 SFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELG 191
SFA G G + G+ F++G+ VW++G +L CER K+ + G+ T+ C+ +A GVVE+G
Sbjct: 175 SFACGAG-LAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVG 233
Query: 192 SSDLIKEDWSLVQLAKSLF 210
S++ I++ L+ + LF
Sbjct: 234 STEPIRQSSDLINKVRILF 252
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 129/191 (67%), Gaps = 6/191 (3%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+KRGRKP +GRE PLNHVEAERQRRE+LN RFY+LR+VVPNVSKMDKASLL DA++YI E
Sbjct: 401 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISE 460
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVK 446
L++K+ + E+ E ++ V+ N +S+ S+ + M+VDVK
Sbjct: 461 LKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSV------LIEMEVDVK 514
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISE 506
I+G +AMIR+QC N+P AK M+ L++L+ V+HAS+S V + M+Q V++ ++
Sbjct: 515 IIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQ 574
Query: 507 EVIRSAIFQRM 517
+ ++ A+ +++
Sbjct: 575 DQLKVALTEKV 585
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 112/196 (57%), Gaps = 15/196 (7%)
Query: 23 TLQQRLQFIVQNRPEWWVYSIFWQPL-------KDVNGRLVLSWGDGYFRGSKDFATRAA 75
LQQRLQ +++ E W Y++FWQ + N ++L WGDGY++G ++ + +
Sbjct: 62 NLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKKK 121
Query: 76 AGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDL-DRMVDGDVTDGEWYYTVSVTRSFA 134
+ A + RK+V +E+ + D D +VTD EW++ VS+T+SF
Sbjct: 122 SNPASAAEQE------HRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWFFLVSMTQSFV 175
Query: 135 IGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSD 194
G G + G+ FS+ D +WL+G + L CER ++ +++G+QT+VCV+T GVVELGSS+
Sbjct: 176 KGTG-LPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSE 234
Query: 195 LIKEDWSLVQLAKSLF 210
+I + LV + F
Sbjct: 235 IIHQSSDLVDKVDTFF 250
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLRE 400
L+HVEAE+QRRE+LNHRFYALR++VP VS+MDKASLL+DAV+YI+ L++K+D+LE ++++
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 401 QARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVKIVGSEAMIRVQCPD 460
+ +N S S + + G + ++V VKIVG EA+IRVQ +
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSD---LEVQVKIVGEEAIIRVQTEN 364
Query: 461 INYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISEEVIRSAIFQRM 517
+N+P + LM L +++ V HA+ S + + M+QDVVV +PEGL SE+ +R+ + + +
Sbjct: 365 VNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSEDRLRTTLVRTL 421
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 43/236 (18%)
Query: 13 PMPFCQETSP--TLQQRLQFIVQNRPEWWVYSIFWQPL-KDVNGRLVLSWGDGYFRGSKD 69
P + P LQQ+L+F+V+ P+ W Y IFWQ + D + R L W DG+F G+K+
Sbjct: 22 PAAIVSSSPPDLVLQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKN 81
Query: 70 FATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDLDRMVDGDVTDGEWYYTVSV 129
++ + + ++ + M+DG D E +Y S
Sbjct: 82 NNSQ---------------------------ENYTTNSIECELMMDGG-DDLELFYAASF 113
Query: 130 TRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVE 189
G+ + S VWLTG EL+ ER KEA HG+ TLV + G++E
Sbjct: 114 -----YGEDRSPRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGIIE 168
Query: 190 LGSSDLIKEDWSLVQLAKSLFGPVIATMLTKQVNLNSESQLQLPNPTTRNNNNTNN 245
LGSS+ I ++ + + KS+FG T T Q P P +++ + N
Sbjct: 169 LGSSESIIQNRNFINRVKSIFGSGKTTKHTNQTG-------SYPKPAVSDHSKSGN 217
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 131/238 (55%), Gaps = 37/238 (15%)
Query: 289 VIKKEQLAAGFGRSSSDSGPSDSDGHFVSGFTDI-------NVTSKKRGRKPTSGRESPL 341
++ Q+ F +SS + ++SDG + D N +KRGR+P +GR L
Sbjct: 373 LLPPAQMQIDFSAASSRASENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEAL 432
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQ 401
NHVEAERQRRE+LN RFYALRSVVPN+SKMDKASLL DAV+YI EL AK+ +EA+ RE+
Sbjct: 433 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE-RER 491
Query: 402 ARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVKIVGSEAMIRVQCPDI 461
G + P S + D++V+ G + +R+ CP
Sbjct: 492 ----------------LGYSSNPPISLDS-----------DINVQTSGEDVTVRINCPLE 524
Query: 462 NYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISEEVIRSAIFQRMQN 519
++PA+++ + + V ++++ ++T+L VV+ E +++E + SA+ + N
Sbjct: 525 SHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKSEE--LTKEKLISALSREQTN 580
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 1 MEEIVSSSSSSYPMPFCQETSPTLQQRLQFIVQNRPEW----WVYSIFWQPLKDVNGRLV 56
++ ++S+S S+ + + LQ +L +V+ RP W Y+IFWQ + G LV
Sbjct: 25 LDYLLSNSVSNANLLMTLGSDENLQNKLSDLVE-RPNASNFSWNYAIFWQISRSKAGDLV 83
Query: 57 LSWGDGYFRGSKDFATRAAAGKQGAGNEPKFGFFLERKKVSKEVQVHFGED------MDL 110
L WGDGY R K+ G E + + RK+V +++ FG + L
Sbjct: 84 LCWGDGYCREPKEGEKSEIVRILSMGREEETHQTM-RKRVLQKLHDLFGGSEEENCALGL 142
Query: 111 DRMVDGDVTDGEWYYTVSVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEA 170
DR VTD E + S+ SF G+G G+ F+S VWL+ C R A
Sbjct: 143 DR-----VTDTEMFLLSSMYFSFPRGEGGP-GKCFASAKPVWLSDVVNSGSDYCVRSFLA 196
Query: 171 RMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQLAKSLFG----PVIATML 218
+ GIQT+V V T GVVELGS+ + E + +SLF PV A L
Sbjct: 197 KSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIRSLFTSSLPPVRAVAL 248
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 109/191 (57%), Gaps = 30/191 (15%)
Query: 327 KKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKE 386
+KRGRKP +GRE LNHVEAERQRRE+LN RFYALR+VVPN+SKMDKASLLADA+ YI +
Sbjct: 305 RKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITD 364
Query: 387 LRAKVDELEAKLREQARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVK 446
++ K+ E + + R+ ++NQ I +VD +
Sbjct: 365 MQKKIRVYETEKQIMKRR--------ESNQ---------------------ITPAEVDYQ 395
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEGLISE 506
+A++R+ CP +P +K++ LR+ E H ++V+ E ++ +R P+G +
Sbjct: 396 QRHDDAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLR-PQGGCTA 454
Query: 507 EVIRSAIFQRM 517
E ++ + +
Sbjct: 455 EQLKDKLLASL 465
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 24 LQQRLQFIVQNRPEWWVYSIFWQPLKDVNGR--LVLSWGDGYFRGSKDFATRAAAGKQGA 81
LQQ L+ +V+ W Y++FW +VN VL WGDG+ R K+GA
Sbjct: 50 LQQGLRHVVEGSD--WDYALFWLA-SNVNSSDGCVLIWGDGHCRV-----------KKGA 95
Query: 82 GNEPKFGFFLERKKVSKEVQVHF-GEDMDLDRMVDGDVTDGEWYYTVSVTRSFAIGDGSV 140
E +++V +++ + F G D D + G +TD + +Y S+ SF D +
Sbjct: 96 SGEDYSQQDEIKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRC-DTNK 154
Query: 141 LGR--VFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKE 198
G + SG +W Y R AR G QT++ V GVVELGS I E
Sbjct: 155 YGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPE 214
Query: 199 DWSLVQLAKSLFG 211
D S++++ KS+FG
Sbjct: 215 DKSVIEMVKSVFG 227
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 15/187 (8%)
Query: 23 TLQQRLQFIVQNRPEWWVYSIFWQPLKDVNGR-----LVLSWGDGYFRGSKDFATRAAAG 77
TLQQRLQ ++++ E W Y+IFWQ D + ++L WGDGY++G +D +
Sbjct: 51 TLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEKKK--- 107
Query: 78 KQGAGNEPKFGFFLERKKVSKEVQVHFGEDMDL-DRMVDGDVTDGEWYYTVSVTRSFAIG 136
N RK+V +E+ + + D D +VTD EW++ VS+T+SF G
Sbjct: 108 -----NNTNTAEQEHRKRVIRELNSLISGGIGVSDESNDEEVTDTEWFFLVSMTQSFVNG 162
Query: 137 DGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLI 196
G + G F + +WL+G L CER + +++G++T+VC++T GVVELGSS++I
Sbjct: 163 VG-LPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEVI 221
Query: 197 KEDWSLV 203
+ L+
Sbjct: 222 SQSSDLM 228
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1
SV=1
Length = 526
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 220/509 (43%), Gaps = 84/509 (16%)
Query: 27 RLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPK 86
R Q + R W Y+IFW G VL WG+G + G D R K+ + K
Sbjct: 24 RKQLALAVRSVQWSYAIFWSSSLTQPG--VLEWGEGCYNG--DMKKR----KKSYESHYK 75
Query: 87 FGFFLERKKVSKEVQVHFGEDMDLDR------------------------MVDGDVTDGE 122
+G + SKE++ + ++ D + D++D E
Sbjct: 76 YGL-----QKSKELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEE 130
Query: 123 WYYTVSVTRSFAIGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVS 182
WYY VS++ F+ + GR ++G+ +WL + R AR IQT+VC
Sbjct: 131 WYYLVSMSYVFSPSQ-CLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFP 189
Query: 183 TACGVVELGSSDLIKEDWSLVQLAKSLFGPVIATMLT---KQVNLN-SESQLQLP-NPTT 237
GV+ELG ++LI ED +L++ KS + A K++ + SE + QLP +
Sbjct: 190 YLGGVIELGVTELISEDHNLLRNIKSCLMEISAHQDNDDEKKMEIKISEEKHQLPLGISD 249
Query: 238 RNNNNTNNVAPLLDIGMFSGAGAPHHHHHHHQKEWSLEENS-----KQQTREVSGDVIKK 292
+ + ++ +L+ + H + E S KQ ++VSG V KK
Sbjct: 250 EDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNIVTSEPGSSFLRWKQCEQQVSGFVQKK 309
Query: 293 EQLAAGFGRSSSDSGPSDSDGHFVSGFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRE 352
+ S D+ + KR + S LN + +R+E
Sbjct: 310 K-----------------SQNVLRKILHDVPLMHTKR---MFPSQNSGLNQDDPSDRRKE 349
Query: 353 RLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLRE---QARKSKVVY 409
N +F LR++VP V+++DK S+L + + Y++EL A+V+ELE+ + R+ K
Sbjct: 350 --NEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKTTE 407
Query: 410 NVYDN---NQSTGS---TIMMPTSSSTTHHLGININIMDVDVKIVGSEAMIRVQCPDINY 463
N+ D+ +++G+ + + +S T + + + + VK+ +E +I V+C +Y
Sbjct: 408 NLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSYRDY 467
Query: 464 PAAKLMDVLRDLEFHVHHASVSSVRETML 492
A +M+ L +L H SVR L
Sbjct: 468 IVADIMETLSNL-----HMDAFSVRSHTL 491
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 17/193 (8%)
Query: 24 LQQRLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGN 83
LQ L+ VQ+ W YS+FWQ + VL WG+GY+ G+ TR
Sbjct: 20 LQGLLKTAVQSVD--WTYSVFWQFCPQ---QRVLVWGNGYYNGA--IKTRKTTQPAEVTA 72
Query: 84 EPKFGFFLERKKVSKEV--QVHFGEDMDLDRMVDG----DVTDGEWYYTVSVTRSFAIGD 137
E LER + +E+ + GE R D+T+ EW+Y + V+ SF
Sbjct: 73 EEAA---LERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPS 129
Query: 138 GSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIK 197
G + G+ ++ +VWL+G +E+ R A+ IQT+VC+ GVVELG++ ++
Sbjct: 130 G-MPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVR 188
Query: 198 EDWSLVQLAKSLF 210
ED V+L KS F
Sbjct: 189 EDVEFVELTKSFF 201
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLRE 400
L+HV AER+RRE+LN +F LRS+VP V+KMDK S+L D +AY+ LR +V ELE E
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHE 421
Query: 401 QARK 404
Q K
Sbjct: 422 QQHK 425
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 18/191 (9%)
Query: 333 PTSGRESPLN-HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKV 391
P SP + ++ +ER RR++LN R +ALRSVVPN++KMDKAS++ DA++YI+ L+ +
Sbjct: 45 PDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEE 104
Query: 392 DELEAKLR--EQARKSKVVYNV-YDNNQSTGSTIMMPTSSSTTHHLGIN-----INIMDV 443
+LEA++R E KS + ++ +D + +++P +S L I ++++
Sbjct: 105 KKLEAEIRELESTPKSSLSFSKDFDRD------LLVPVTSKKMKQLDSGSSTSLIEVLEL 158
Query: 444 DVKIVGSEAM-IRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEG 502
V +G M + V C KL +V L + ++++S + V + E
Sbjct: 159 KVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEE 218
Query: 503 LISEEVIRSAI 513
+EV+R I
Sbjct: 219 --EQEVLRLKI 227
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 39 WVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAA-------AGKQGAGNEPKFGFFL 91
W Y IFW +G VL WGDGY+ G D TR A + G +
Sbjct: 27 WSYGIFWSVSASQSG--VLEWGDGYYNG--DIKTRKTIQASEIKADQLGLRRSEQLSELY 82
Query: 92 ERKKVSKEVQVHFGEDMDLDRMVDG------DVTDGEWYYTVSVTRSFAIGDGSVLGRVF 145
E V++ + R D+ D EWYY V ++ F IG+G + GR F
Sbjct: 83 ESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIGEG-MPGRTF 141
Query: 146 SSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSDLIKEDWSLVQL 205
++G+ +WL H R A+ ++T+VC GVVE+G+++ I ED +++Q
Sbjct: 142 ANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMNVIQC 201
Query: 206 AKSLF 210
K+ F
Sbjct: 202 VKTSF 206
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 336 GRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
R+ NH E++RRE+LN RF LR ++P+++K+DK S+L D + Y++EL +V ELE
Sbjct: 435 ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 396 AKLREQA-----------RKS------KVVYNVYDNNQSTGSTIMM----PTSSSTTHHL 434
+ RE RK + N +N G + + + T
Sbjct: 495 S-CRESTDTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFT 553
Query: 435 GININIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
G+ N+ + G+E +I ++C ++MDV+ DL H S+
Sbjct: 554 GLTDNLR---IGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSST 602
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 95/171 (55%), Gaps = 18/171 (10%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
+ N KR + + + + +H+ AER+RRE+L RF AL ++VP + KMDKAS+L DA
Sbjct: 131 EFNRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDA 190
Query: 381 VAYIKELRAKVDELEAKLREQ-------ARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHH 433
+ +IK L+ +V ELE + +E+ +KSK++ + DNNQS S+ S
Sbjct: 191 LKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILD--DNNQSFSSSCEDGFS------ 242
Query: 434 LGININIMDVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASV 484
++++ +++V+ + +I++ C AK+M + L + ++SV
Sbjct: 243 ---DLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 290
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 29 QFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPKFG 88
Q V R W Y IFW G VL WGDGY+ G D TR K E K
Sbjct: 16 QLAVSVRNIQWSYGIFWSVSASQPG--VLEWGDGYYNG--DIKTR----KTIQAAEVKID 67
Query: 89 -FFLERKKVSKEV--------QVHFGEDMDLDR-----MVDGDVTDGEWYYTVSVTRSFA 134
LER + +E+ G R + D+TD EWYY V ++ F
Sbjct: 68 QLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFN 127
Query: 135 IGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSD 194
IG+G + G S+G+ +WL R A+ +QT+VC GV+E+G+++
Sbjct: 128 IGEG-IPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTE 186
Query: 195 LIKEDWSLVQLAKSLF--GPVIATMLTK 220
IKED +++Q K+LF P T+ T+
Sbjct: 187 HIKEDMNVIQSVKTLFLEAPPYTTISTR 214
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 321 DINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
++ + +KK P + E+ NH +E++RRE+LN RF LRS++P++SK+DK S+L D
Sbjct: 385 EVPLMNKKEELLPDTPEETG-NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDT 443
Query: 381 VAYIKELRAKVDELEAKLREQA----RKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGI 436
+ Y+++L+ +V ELE+ RE A R + + D+ + S M + G
Sbjct: 444 IEYLQDLQKRVQELES-CRESADTETRITMMKRKKPDDEEERASANCM-----NSKRKGS 497
Query: 437 NINIMD--------------VDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHA 482
++N+ + + + +G+E +I ++C ++MDV+ DL H
Sbjct: 498 DVNVGEDEPADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSV 557
Query: 483 SVSS 486
S+
Sbjct: 558 QSST 561
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 47/238 (19%)
Query: 266 HHHQKEWSLEENSKQQTREVSGDVIKKEQLAAGFGRSSSDSGPSDSDGHFVSGFTDINVT 325
H ++ W E Q +E+ D E+ +G G SSS G + S
Sbjct: 6 HEYKNYW--ETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATS-------------- 49
Query: 326 SKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIK 385
P S + +V +ER RR++LN R +ALRSVVPN+SK+DKAS++ D++ Y++
Sbjct: 50 -------PASSK-----NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 386 ELRAKVDELEAKLREQARKSKVVYN----------------VYDNNQSTGSTIMMPTSSS 429
EL + LEA++RE +S ++ N DNN S+
Sbjct: 98 ELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYST 157
Query: 430 TTHHLGININIMDVDVKIVGSEA-MIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
H I ++++ V +G + ++ + C +L VL L ++ + SS
Sbjct: 158 RVQHYP--IEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSS 213
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 27 RLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPK 86
R Q R W Y++FW G VL+W DG++ G + TR + ++
Sbjct: 25 RSQLAAAARSINWSYALFWSISDTQPG--VLTWTDGFYNG--EVKTRKISNSVELTSD-- 78
Query: 87 FGFFLERKKVSKEV--QVHFGEDMDLDR----------MVDGDVTDGEWYYTVSVTRSFA 134
++R +E+ + GE DR + D+ D EWYY VS+T +F
Sbjct: 79 -QLVMQRSDQLRELYEALLSGEG---DRRAAPARPAGSLSPEDLGDTEWYYVVSMTYAFR 134
Query: 135 IGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSD 194
G G + GR F+S ++VWL H R A+ IQ+++C+ GV+ELG++D
Sbjct: 135 PGQG-LPGRSFASDEHVWLCNAHLAGSKAFPRALLAKSASIQSILCIPVMGGVLELGTTD 193
Query: 195 LIKEDWSLVQLAKSLF 210
+ E LV A + F
Sbjct: 194 TVPEAPDLVSRATAAF 209
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQ 401
NHV +ER+RRE+LN F L+S++P++ +++KAS+LA+ +AY+KEL+ +V ELE+
Sbjct: 418 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPA 477
Query: 402 ARKSKVVYNVYD-----NNQSTGSTIMMPTSSSTTHHLG-----------ININIMDVDV 445
+R S+ + NN+S + S + LG ++ +V V
Sbjct: 478 SRPSETTTRLITRPSRGNNESVRKEVCA-GSKRKSPELGRDDVERPPVLTMDAGSSNVTV 536
Query: 446 KIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
+ + ++ VQC ++ D ++ L V S+
Sbjct: 537 TVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASA 577
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 27 RLQFIVQNRPEWWVYSIFWQPLKDVNGRLVLSWGDGYFRGSKDFATRAAAGKQGAGNEPK 86
R Q R W Y++FW G VL+W DG++ G + TR + ++
Sbjct: 25 RSQLAAAARSINWSYALFWSISDTQPG--VLTWTDGFYNG--EVKTRKISNSVELTSD-- 78
Query: 87 FGFFLERKKVSKEV--QVHFGEDMDLDR----------MVDGDVTDGEWYYTVSVTRSFA 134
++R +E+ + GE DR + D+ D EWYY VS+T +F
Sbjct: 79 -QLVMQRSDQLRELYEALLSGEG---DRRAAPARPAGSLSPEDLGDTEWYYVVSMTYAFR 134
Query: 135 IGDGSVLGRVFSSGDYVWLTGDHELQLYECERVKEARMHGIQTLVCVSTACGVVELGSSD 194
G G + GR F+S ++VWL H R A+ IQ+++C+ GV+ELG++D
Sbjct: 135 PGQG-LPGRSFASDEHVWLCNAHLAGSKAFPRALLAKSASIQSILCIPVMGGVLELGTTD 193
Query: 195 LIKEDWSLVQLAKSLF 210
+ E LV A + F
Sbjct: 194 TVPEAPDLVSRATAAF 209
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQ 401
NHV +ER+RRE+LN F L+S++P++ +++KAS+LA+ +AY+KEL+ +V ELE+
Sbjct: 416 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPA 475
Query: 402 ARKSKVVYNVYD-----NNQSTGSTIMMPTSSSTTHHLG-----------ININIMDVDV 445
+R S+ + NN+S + S + LG ++ +V V
Sbjct: 476 SRPSETTTRLITRPSRGNNESVRKEVCA-GSKRKSPELGRDDVERPPVLTMDAGTSNVTV 534
Query: 446 KIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSS 486
+ + ++ VQC ++ D ++ L V S+
Sbjct: 535 TVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASA 575
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 340 PLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLR 399
P ++ AER+RR++LN R Y LRSVVP +SKMD+AS+L DA+ Y+KEL ++++L +L
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 400 EQARKSKVVYNVYDNNQSTGSTI---MMPTSS 428
S ++ + Q+ + + P+SS
Sbjct: 325 STPPSSSSLHPLTPTPQTLSYRVKEELCPSSS 356
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 340 PLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKL 398
P ++ AER+RR++LN R Y LRSVVP +SKMD+AS+L DA+ Y+KEL ++++L +L
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNEL 363
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 46/57 (80%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQA 402
AER+RR++LN R YALRS+VP ++K+D+AS+L DA+ Y+KEL+ + EL+ +L E +
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYIKELRAKVDELEAKL 398
++H+ ER RR ++N +LRS+ P + + D+AS++ + +IKEL+ V LE+K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 399 REQA-RKSKVVYN--VYDNNQSTGSTIMMPTS-------SSTTHHLGININI--MDVDVK 446
R + + Y+ + + +T +P S +ST +G N +V+ K
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 447 IVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRI 499
I GS ++RV I K++ VL L F V H ++SS+ ET+L VV+I
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKLREQARKS 405
+ER+RR R+ + YALRS+VPN++KMDKAS++ DAV Y++EL+++ +L KS
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKL---------KS 185
Query: 406 KVVYNVYDNNQSTGSTIMMPTSSSTTHHLGINI----NIMDVDVKIVGSEAM-IRVQCPD 460
+ N + G P + T GIN I+ +DV V + +R+ C
Sbjct: 186 DIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCNK 245
Query: 461 INYPAAKLMDVLRDL-EFHVHHASVSS 486
A L L L F V ++++SS
Sbjct: 246 GEGVAPSLYKSLESLTSFQVQNSNLSS 272
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 298 GFGRSSSDSGPSDSDGHFVSGFT-DINVTSKKRGRKPTSGRESP---LNHVEAERQRRER 353
FG + + P ++ +F + + D V SK++ GR P HV AER+RR++
Sbjct: 84 SFGSPDTKTNPVETSLNFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQK 143
Query: 354 LNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
LN R AL +++P + K DKA++L DA+ ++K+L+ +V +LE
Sbjct: 144 LNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLE 185
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 328 KRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKEL 387
KR + T + + +H+ AER+RRE+L RF AL +++P + KMDKAS+L DA+ +IK L
Sbjct: 112 KRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYL 171
Query: 388 RAKVDELEAKLREQARKSKVVYN----VYDNNQSTGSTIMMPTSSSTTHHLGININIMDV 443
+ V E E + +E+ +S V+ V D N S+ + +++ + N+ ++
Sbjct: 172 QESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSS-----SSNLPEI 226
Query: 444 DVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASV 484
+V++ G + +I++ C K+M + L + +++V
Sbjct: 227 EVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 318 GFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLL 377
F I T+KKR K G+ P ++ AER+RR+RLN R LRS+VP ++KMD+ S+L
Sbjct: 129 SFISIGETNKKRSNKKLEGQ--PSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSIL 186
Query: 378 ADAVAYIKELRAKVDELEAKLREQARKSKV 407
DA+ Y+KEL K+++L+ +E S +
Sbjct: 187 GDAIDYMKELLDKINKLQEDEQELGSNSHL 216
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 86/162 (53%), Gaps = 23/162 (14%)
Query: 331 RKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAK 390
R P +E HV AER+RRE+L+ +F AL +++P + K DK ++L DA++ +K+L+ +
Sbjct: 112 RSPVLAKE----HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQ 167
Query: 391 V----DELEAKLREQA----RKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMD 442
+ +E EA + ++ +KSKV ++ N S S + H+ + + +
Sbjct: 168 LRTLKEEKEATRQMESMILVKKSKVFFDEEPN-----------LSCSPSVHIEFDQALPE 216
Query: 443 VDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASV 484
++ KI ++ +IR+ C +++ + + + + ++ V
Sbjct: 217 IEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIV 258
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 301 RSSSDSGPSDSDGHFVSGFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYA 360
R S+ G +++ F SG + + +++GR + ER+RR LN R+ A
Sbjct: 178 RDESNVGDENNNAQFDSGIIEFSKEIRRKGRGKRKNKP-----FTTERERRCHLNERYEA 232
Query: 361 LRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
L+ ++P+ SK D+AS+L D + YI ELR +V EL+
Sbjct: 233 LKLLIPSPSKGDRASILQDGIDYINELRRRVSELK 267
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 325 TSKKRGRKPTSGRE---SPLNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLAD 379
+ +KR R + E + H+ ER RR+++N LRS++P V + D+AS++
Sbjct: 178 SKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGG 237
Query: 380 AVAYIKELRAKVDELEAKLR-----EQARKSKVVYNVYDN------NQS-----TGSTIM 423
A+ +++EL + LE++ R E R + NQ+ TG+
Sbjct: 238 AIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTE 297
Query: 424 MPTSSSTTHHLGININIM-DVDVKIVGSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHA 482
+ N + + DV+VK++G +AMI++ K + L DL + H
Sbjct: 298 LEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHT 357
Query: 483 SVSSVRETMLQDVVVRI-PEGLISEEVIRSAIFQ 515
+++++ +T+L V+I E + E I S+I Q
Sbjct: 358 NITTMEQTVLYSFNVKITSETRFTAEDIASSIQQ 391
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 306 SGPSDSDGHFVSGFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVV 365
+G + S F GF+ SK ++ + + H +AER+RR R+N +F LR+++
Sbjct: 64 AGAATSSKLFSRGFSVTKPKSKTESKEVAAKK-----HSDAERRRRLRINSQFATLRTIL 118
Query: 366 PNVSKMDKASLLADAVAYIKELRAKVDEL 394
PN+ K DKAS+L + V Y EL+ V ++
Sbjct: 119 PNLVKQDKASVLGETVRYFNELKKMVQDI 147
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 328 KRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKEL 387
++GR R SP ER+RR N RF+ L++++PN +K+D+AS++ +A+ YIKEL
Sbjct: 238 RKGRGSRKSRTSP-----TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL 292
Query: 388 RAKVDELE--------AKLREQARKSKVVYNVYDNNQSTGSTI-MMPTSSSTTHHLGINI 438
++E + + R + R ++ + T+ P S N
Sbjct: 293 LRTIEEFKMLVEKKRCGRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNN 352
Query: 439 N-------------IMDVDVKIVGSEAMIR-VQCPDINYPAAKLMDVLRDLEFHVHHASV 484
N + +VDV+I+ E I+ VQ IN VL L+ +HH +
Sbjct: 353 NNSLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINC-LLFTTKVLDQLQLDLHHVAG 411
Query: 485 SSVRE 489
+ E
Sbjct: 412 GQIGE 416
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Query: 325 TSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYI 384
T+KK+ +K G+ P ++ AER+RR+RLN R LRS+VP +SKMD+ S+L DA+ Y+
Sbjct: 164 TNKKKSKK-LEGQ--PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Query: 385 KELRAKVDELEAKLRE 400
KEL K+++L+ + +E
Sbjct: 221 KELLDKINKLQDEEQE 236
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 323 NVTSKKRGRK--PTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADA 380
N K +K PT +S ++ +ER+RRER+N Y LR+VVP ++K++K + +DA
Sbjct: 245 NANDSKANKKLLPTENFKS--KNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDA 302
Query: 381 VAYIKELRAKVDELEAKLR 399
V YI EL + +LE +L+
Sbjct: 303 VDYINELLVEKQKLEDELK 321
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 326 SKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIK 385
SKKR PT ER+RR RF L++++PN +K D+AS++ +A+ YIK
Sbjct: 212 SKKRKIFPT------------ERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIK 259
Query: 386 ELRAKVDELEAKLREQ--ARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHH------LGIN 437
EL +DE + + ++ ++++ +V D N S ++ + ++ L
Sbjct: 260 ELLRTIDEFKLLVEKKRVKQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRK 319
Query: 438 INIMDVDVKIVGSEAMIR-VQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVV 496
DVDV+I+ E I+ VQ IN + V+ LE +HH + + + E
Sbjct: 320 SKFTDVDVRIIDDEVTIKIVQKKKINC-LLFVSKVVDQLELDLHHVAGAQIGEHHSFLFN 378
Query: 497 VRIPEGLISEEVIRSAIFQRM 517
+I EG V SAI R+
Sbjct: 379 AKISEG---SSVYASAIADRV 396
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 38/49 (77%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKV 391
H ++ER+RR+++N R L+ +VPN SK DKAS+L + + Y+K+L+A+V
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
++EAER+RRE+L+ R ALRS VP V+ M KAS++ DA+ YI EL+ V L
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNL 84
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKV 391
H +ER+RR+R+N + AL+ ++PN +K+DKAS+L +A+ Y+K L+ +V
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 342 NHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDE 393
+H AE++RR+R+N ALR +VPN K+DKA+LLA + +KEL+ K E
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEAKL 398
A R+RR R++ RF LRS+VP SKMD S+L A+ Y+K L+A+V +A L
Sbjct: 48 AARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAAL 100
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 245 NVAPLLDIGMFSGAGAPHHHHHHHQKEWSLEENSKQQTREVSGDVIKKEQLAAGFGRSSS 304
N A +LD G+ H + + L + K+Q +++ + + A G+S S
Sbjct: 55 NYAAVLD-------GSNHQTNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLS 107
Query: 305 DSGPSDSDGHFVSGFTDINVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSV 364
SD + G S KR K G S + A R+RRER+N R L+S+
Sbjct: 108 SYNSSDDEKAL--GLVSNTSKSLKRKAKANRGIASDPQSLYA-RKRRERINDRLKTLQSL 164
Query: 365 VPNVSKMDKASLLADAVAYIKELRAKVDELEAK 397
VPN +K+D +++L DAV Y+K L+ ++ L ++
Sbjct: 165 VPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
H +E++RR R+N + AL+S++PN +K DKAS+L +A+ Y+K+L+ +V L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 346 AERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELE 395
A RQRRER++ + L+++VP +KMD AS+L +A Y+K LRA+V LE
Sbjct: 283 AARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYIKELRAKVDELEAKL 398
+NH+ ER RR ++N +LR+++P + + D+AS++ A+ Y+K L + LE++
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 399 R-EQARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVKIVGSEAMIRVQ 457
R +Q S+VV N ++ S + T T I ++ ++ + ++VQ
Sbjct: 238 RTQQQSNSEVVENALNHLSGISSNDLWTTLEDQT-------CIPKIEATVIQNHVSLKVQ 290
Query: 458 CPDINYPAAKLMDVLRDLEFHVHHASVSS 486
C K + L L+ V H ++++
Sbjct: 291 CEKKQGQLLKGIISLEKLKLTVLHLNITT 319
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYIKELRAKVDELEAKL 398
+ H+ ER RR+++N LRS++P + D+AS++ A+ Y+KEL + +E +
Sbjct: 125 MTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPV 184
Query: 399 REQARKSKVVYNVYDNNQSTGST-----IMMPTSSSTTHHLGININIMDVDVKIVGSEAM 453
+ + ++ ++ S P S+ + +++V +V S A
Sbjct: 185 KTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHAS 244
Query: 454 IRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEG--LISEEVIRS 511
+++ KL+ ++ L + H +V++ +++L + V++ EG L + E I +
Sbjct: 245 LKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDIAA 304
Query: 512 AIFQ 515
A+ Q
Sbjct: 305 AVNQ 308
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 322 INVTSKKRGRKPTSGRESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAV 381
++ TS KR R H +ER+RR+R+N R AL+ ++P +K DKAS+L +A+
Sbjct: 275 VSTTSTKRSRAAEV-------HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAI 327
Query: 382 AYIKELRAKV 391
Y+K L+ ++
Sbjct: 328 EYMKSLQLQI 337
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
H +E++RR ++N + AL+ ++PN +K DKAS+L +A+ Y+K+L+ +V L
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 87/174 (50%), Gaps = 20/174 (11%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYIKELRAKVDELEAKL 398
+ H+ ER RR+++N LRS++P+ + D+AS++ A+ Y+KEL + +E K
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPK- 173
Query: 399 REQARKSKVVYNVYDNNQSTGSTIMMP----------TSSSTTHHLGININIMDVDVKIV 448
R + K ++++ S+++ P ++ S++ + + +++V +
Sbjct: 174 RTRTHDPK-------GDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVA 226
Query: 449 GSEAMIRVQCPDINYPAAKLMDVLRDLEFHVHHASVSSVRETMLQDVVVRIPEG 502
S A I++ KL+ L+ L + H +V+++ ++L + VR+ EG
Sbjct: 227 ESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEG 280
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 343 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDEL 394
H AER RRER+ R AL+ +VPN +K DKAS+L + + Y+K L+ +V L
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 329 RGRKPTSGRESPLN-HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKEL 387
R RKP + R+ H ER+RR+ N + AL+ ++PN K DKASLL +A+ Y++ L
Sbjct: 219 RTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTL 278
Query: 388 RAKV 391
+ +V
Sbjct: 279 QLQV 282
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 341 LNHVEAERQRRERLNHRFYALRSVVPN--VSKMDKASLLADAVAYIKELRAKVDELEAKL 398
+ H+ ER RR ++N +LRS++P+ + + D+AS++ A+ ++K L ++ LEA+
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 399 REQARKSKVVYNVYDNNQSTGSTIMMPTSSSTTHHLGININIMDVDVKIVGSEAMIRVQC 458
R Q DN+ S+ + S+ + I + ++ S +++QC
Sbjct: 253 RSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI-----EATVIESHVNLKIQC 307
Query: 459 PDINYPAAKLMDVLRDLEFHVHHASVSS 486
+ + +L L F V H +++S
Sbjct: 308 TRKQGQLLRSIILLEKLRFTVLHLNITS 335
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 291 KKEQLAAGFGRSSSDSGPSDSDGHFVSGFTD---INVTSKKRGRKPTSGRESPLNHVEAE 347
KK+Q + + +S + DG +S +D +VTS K + T G + + A
Sbjct: 124 KKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYA- 182
Query: 348 RQRRERLNHRFYALRSVVPNVSKMDKASLLADAVAYIKELRAKVDELEA 396
R+RRE++N R L+++VPN +K+D +++L +AV Y+K L+ ++ L +
Sbjct: 183 RKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,450,834
Number of Sequences: 539616
Number of extensions: 8401035
Number of successful extensions: 48881
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 313
Number of HSP's that attempted gapping in prelim test: 46932
Number of HSP's gapped (non-prelim): 1818
length of query: 519
length of database: 191,569,459
effective HSP length: 122
effective length of query: 397
effective length of database: 125,736,307
effective search space: 49917313879
effective search space used: 49917313879
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)