Query 010056
Match_columns 519
No_of_seqs 282 out of 1362
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 18:55:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010056.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010056hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oqya1 a.5.2.1 (A:160-200) DN 58.7 3.3 0.00024 26.7 2.7 25 378-402 4-28 (41)
2 d1j9ba_ c.47.1.12 (A:) Arsenat 54.7 9.8 0.00072 30.8 5.9 79 103-195 15-95 (138)
3 d2g3qa1 a.5.2.1 (A:1339-1381) 50.3 4.9 0.00035 25.9 2.4 23 382-404 8-30 (43)
4 d1z3ea1 c.47.1.12 (A:1-114) Re 44.4 27 0.0019 26.9 6.8 78 104-195 16-95 (114)
5 d1rw1a_ c.47.1.12 (A:) Hypothe 39.7 18 0.0013 27.9 5.0 19 389-407 72-90 (114)
6 d1zcza1 c.24.1.3 (A:1-157) IMP 39.4 12 0.00091 31.1 4.1 59 159-238 11-69 (157)
7 d1oqya1 a.5.2.1 (A:160-200) DN 37.1 15 0.0011 23.4 3.2 25 270-294 4-28 (41)
8 d2g3qa1 a.5.2.1 (A:1339-1381) 36.6 16 0.0012 23.4 3.2 24 273-296 7-30 (43)
9 d1g8ma1 c.24.1.3 (A:4-200) IMP 31.2 21 0.0015 30.8 4.3 59 159-238 12-70 (197)
10 d1wgna_ a.5.2.1 (A:) Ubiquitin 31.2 14 0.00099 25.9 2.5 38 379-423 20-57 (63)
11 d1wiva_ a.5.2.1 (A:) Ubiquitin 29.7 19 0.0014 25.8 3.2 37 379-422 30-66 (73)
12 d1rw1a_ c.47.1.12 (A:) Hypothe 28.2 13 0.00092 28.9 2.1 23 172-194 71-93 (114)
13 d1vg5a_ a.5.2.1 (A:) Rhomboid 24.9 22 0.0016 25.4 2.8 38 379-423 30-67 (73)
14 d1k6ya1 a.4.10.1 (A:1-46) N-te 24.7 24 0.0017 23.0 2.7 29 377-405 14-43 (46)
15 d1rxwa1 a.60.7.1 (A:220-324) F 24.5 64 0.0047 24.2 5.8 13 388-400 89-101 (105)
16 d1zcza1 c.24.1.3 (A:1-157) IMP 23.4 33 0.0024 28.4 4.0 57 197-274 13-69 (157)
17 d2pfxa1 a.152.1.3 (A:1-190) Un 22.4 1.7E+02 0.013 23.8 9.0 39 382-429 144-182 (190)
18 d1wgna_ a.5.2.1 (A:) Ubiquitin 22.0 43 0.0031 23.1 3.8 22 272-293 21-42 (63)
19 d1g8ma1 c.24.1.3 (A:4-200) IMP 21.1 51 0.0037 28.2 4.9 59 196-275 13-71 (197)
20 d1wjia_ a.5.2.1 (A:) Tudor dom 20.3 36 0.0026 23.4 3.1 39 380-425 11-49 (63)
No 1
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.73 E-value=3.3 Score=26.68 Aligned_cols=25 Identities=12% Similarity=0.095 Sum_probs=21.0
Q ss_pred HHHhHHHHHHhCCcHHHHHHHHHhc
Q 010056 378 VTRHVDFLKSCGFFLQQVRQIVVEC 402 (519)
Q Consensus 378 l~~kv~fL~~lG~s~e~I~~mv~r~ 402 (519)
.+.+++-|.+|||+.+++.+.+.++
T Consensus 4 ~e~~i~~L~~MGF~~~~a~~AL~~~ 28 (41)
T d1oqya1 4 YETMLTEIMSMGYERERVVAALRAS 28 (41)
T ss_dssp HHHHHHHHHTTTCCSHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 4677888999999999998888765
No 2
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=54.71 E-value=9.8 Score=30.83 Aligned_cols=79 Identities=14% Similarity=0.354 Sum_probs=53.0
Q ss_pred hHHHHHHhCCCCccccCCccCCCChHHHHHHHHHHHhCCCCccccccCCcccccccccchHHHHHH--HhhCCCChhHHH
Q 010056 103 KVYDFLQGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDY--LGKLGVRKSTFT 180 (519)
Q Consensus 103 ~vv~yL~~~Gi~~~~l~~l~~p~~~d~v~~~l~~L~~lGls~~~i~~~P~lL~~s~~~~l~p~l~~--L~~lGls~~~i~ 180 (519)
+.+.||++-|++.+.+.-+..|-+.+.+ ..++..+|.+..++-+. + .....- +..-.++.+++.
T Consensus 15 kal~~L~~~~i~~~~idy~k~pls~~eL---~~ll~~lg~~~~~Li~~------~-----~~~~k~l~l~~~~ls~~e~i 80 (138)
T d1j9ba_ 15 NTLEMIRNSGTEPTIILYLENPPSRDEL---VKLIADMGISVRALLRK------N-----VEPYEQLGLAEDKFTDDQLI 80 (138)
T ss_dssp HHHHHHHHTTCCCEEECTTTSCCCHHHH---HHHHHHHTSCHHHHBCC------S-----SHHHHHTTTTSSCCCHHHHH
T ss_pred HHHHHHHHCCCCeEEEeeccCCCCHHHH---HHHHHHccCCHHHHHHc------c-----CchhhhcCCCcccCCHHHHH
Confidence 3468999999988776666667777776 66777778777665321 0 001111 112357888999
Q ss_pred HHHhhcCcccccccc
Q 010056 181 EFLRRYPQVLHSSVV 195 (519)
Q Consensus 181 ~ll~~~P~iL~~s~~ 195 (519)
.++..+|.++...+.
T Consensus 81 ~ll~~~P~LikRPIv 95 (138)
T d1j9ba_ 81 DFMLQHPILINRPIV 95 (138)
T ss_dssp HHHHHSGGGBCSCEE
T ss_pred HHHHhCchhEecCEE
Confidence 999999999988764
No 3
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=50.33 E-value=4.9 Score=25.91 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=18.9
Q ss_pred HHHHHHhCCcHHHHHHHHHhcCc
Q 010056 382 VDFLKSCGFFLQQVRQIVVECPQ 404 (519)
Q Consensus 382 v~fL~~lG~s~e~I~~mv~r~P~ 404 (519)
++-|++|||+.++.++.+.++-.
T Consensus 8 i~eL~~MGF~e~~A~~AL~k~~w 30 (43)
T d2g3qa1 8 VEELSGMGFTEEEAHNALEKCNW 30 (43)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHTS
T ss_pred HHHHHhcCCCHHHHHHHHHHcCC
Confidence 67788899999999988887743
No 4
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}
Probab=44.39 E-value=27 Score=26.90 Aligned_cols=78 Identities=13% Similarity=0.172 Sum_probs=49.7
Q ss_pred HHHHHHhCCCCccccCCccCCCChHHHHHHHHHHHhCCCCccccccCCcccccccccchHHHHHHH--hhCCCChhHHHH
Q 010056 104 VYDFLQGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYL--GKLGVRKSTFTE 181 (519)
Q Consensus 104 vv~yL~~~Gi~~~~l~~l~~p~~~d~v~~~l~~L~~lGls~~~i~~~P~lL~~s~~~~l~p~l~~L--~~lGls~~~i~~ 181 (519)
.+.||++-|++.....-...|.+.+.+ ..++..+|....++-+. +. ....-| ....++.+++..
T Consensus 16 a~~~L~~~~i~~~~~d~~~~p~s~~eL---~~ll~~~~~~~~~lin~------~~-----~~~k~l~~~~~~ls~~~~i~ 81 (114)
T d1z3ea1 16 ARAWLEEHEIPFVERNIFSEPLSIDEI---KQILRMTEDGTDEIIST------RS-----KVFQKLNVNVESMPLQDLYR 81 (114)
T ss_dssp HHHHHHHTTCCEEEEETTTSCCCHHHH---HHHHHTCSSCGGGTBCT------TS-----HHHHHHCCCGGGSBHHHHHH
T ss_pred HHHHHHHCCCCeEEEeeeccCCCHHHH---HHHHHHhccCHHHHHHh------cC-----chhhhcccchhhhhhHHHHH
Confidence 367888888887766555567677666 66677777777765321 00 001111 112467788999
Q ss_pred HHhhcCcccccccc
Q 010056 182 FLRRYPQVLHSSVV 195 (519)
Q Consensus 182 ll~~~P~iL~~s~~ 195 (519)
++..+|.++...+.
T Consensus 82 ll~~~P~LikRPI~ 95 (114)
T d1z3ea1 82 LINEHPGLLRRPII 95 (114)
T ss_dssp HHHHCGGGBCSCEE
T ss_pred HHHhChhheeCCEE
Confidence 99999998887764
No 5
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=39.68 E-value=18 Score=27.90 Aligned_cols=19 Identities=5% Similarity=0.197 Sum_probs=11.6
Q ss_pred CCcHHHHHHHHHhcCchhc
Q 010056 389 GFFLQQVRQIVVECPQVLA 407 (519)
Q Consensus 389 G~s~e~I~~mv~r~P~lL~ 407 (519)
.++.+++.+++..+|.++.
T Consensus 72 ~ls~~e~i~~i~~~P~Lik 90 (114)
T d1rw1a_ 72 DLDEAKAIELMLAQPSMIK 90 (114)
T ss_dssp TCCHHHHHHHHHHCGGGBC
T ss_pred cccHHHHHHHHHhCcceEe
Confidence 4556666666666666554
No 6
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=39.36 E-value=12 Score=31.08 Aligned_cols=59 Identities=22% Similarity=0.401 Sum_probs=42.4
Q ss_pred ccchHHHHHHHhhCCCChhHHHHHHhhcCcccccccccchHHHHHHHHhcCCCCCChhHHhhhCccccccccccchhhHH
Q 010056 159 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGLDIKPNDIPRVLERYPEVLGFKLEGTMSTSV 238 (519)
Q Consensus 159 ~~~l~p~l~~L~~lGls~~~i~~ll~~~P~iL~~s~~~~l~p~v~fL~~lG~s~~~I~~il~~~P~lL~~s~e~~l~p~v 238 (519)
...+.+....|.++|+. |+.. .-.-+||++.|++-.+|.+ ++.+|++|.-++ ++|.|++
T Consensus 11 K~~l~~la~~L~~~g~~-------------IisT------gGTak~L~~~Gi~v~~Vs~-~Tg~peil~gRv-KTLhp~i 69 (157)
T d1zcza1 11 KEKYLDILRELHEKGWE-------------IWAS------SGTAKFLKSNGIEANDVST-ITGFENLLGGLV-KTLHPEI 69 (157)
T ss_dssp TGGGHHHHHHHHHTTCE-------------EEEC------HHHHHHHHHTTCCCEEGGG-GSCCCCGGGGTT-TTCCHHH
T ss_pred ccchHHHHHHHHHCCCE-------------EEEc------ChHHHHHHHhhhhhhHHHH-HhhHHHHHHhhh-ccchHHH
Confidence 44578888888888873 1211 2467888889998888877 458899998887 4777765
No 7
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.05 E-value=15 Score=23.38 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=15.0
Q ss_pred hhhHHHHHHHhCCChHHHHHHHHhC
Q 010056 270 IKPFVEYLESLGIPRLAVARLIEKK 294 (519)
Q Consensus 270 l~p~v~~L~~lG~~~~~i~~iI~~~ 294 (519)
.+..|.-|.++|++++.+.+.+.++
T Consensus 4 ~e~~i~~L~~MGF~~~~a~~AL~~~ 28 (41)
T d1oqya1 4 YETMLTEIMSMGYERERVVAALRAS 28 (41)
T ss_dssp HHHHHHHHHTTTCCSHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 4455666666666666666655544
No 8
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=36.58 E-value=16 Score=23.40 Aligned_cols=24 Identities=25% Similarity=0.322 Sum_probs=17.6
Q ss_pred HHHHHHHhCCChHHHHHHHHhCCc
Q 010056 273 FVEYLESLGIPRLAVARLIEKKPY 296 (519)
Q Consensus 273 ~v~~L~~lG~~~~~i~~iI~~~P~ 296 (519)
.|+-|.+||+++++..+.+.++-|
T Consensus 7 ai~eL~~MGF~e~~A~~AL~k~~w 30 (43)
T d2g3qa1 7 AVEELSGMGFTEEEAHNALEKCNW 30 (43)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTS
T ss_pred HHHHHHhcCCCHHHHHHHHHHcCC
Confidence 455677788888888777777765
No 9
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.23 E-value=21 Score=30.79 Aligned_cols=59 Identities=22% Similarity=0.418 Sum_probs=39.9
Q ss_pred ccchHHHHHHHhhCCCChhHHHHHHhhcCcccccccccchHHHHHHHHhcCCCCCChhHHhhhCccccccccccchhhHH
Q 010056 159 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGLDIKPNDIPRVLERYPEVLGFKLEGTMSTSV 238 (519)
Q Consensus 159 ~~~l~p~l~~L~~lGls~~~i~~ll~~~P~iL~~s~~~~l~p~v~fL~~lG~s~~~I~~il~~~P~lL~~s~e~~l~p~v 238 (519)
...+.+....|.++|+. |+.. .-..+||++.|+.-.+|.++ +.+|.++.-++ ++|.|++
T Consensus 12 K~~l~~la~~L~~~g~~-------------IisT------gGTak~L~~~gi~v~~Vs~~-tg~peil~GRV-KTLhPkI 70 (197)
T d1g8ma1 12 KAGLVEFARSLNALGLG-------------LIAS------GGTATALRDAGLPVRDVSDL-TGFPEMLGGRV-KTLHPAV 70 (197)
T ss_dssp CTTHHHHHHHHHHTTCE-------------EEEC------HHHHHHHHHTTCCCEEHHHH-HSCCCBGGGTB-SSCSHHH
T ss_pred ccCHHHHHHHHHHCCCE-------------EEEC------cHHHHHHHHhcccHHHHHhh-hcCHHHHHHHH-hhcccee
Confidence 34577777777777763 1221 23567888888888888775 58888888777 4677665
No 10
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.15 E-value=14 Score=25.87 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=27.9
Q ss_pred HHhHHHHHHhCCcHHHHHHHHHhcCchhccCHHHHHHHHHHHHHH
Q 010056 379 TRHVDFLKSCGFFLQQVRQIVVECPQVLALNLDIMKLSFDYFQRE 423 (519)
Q Consensus 379 ~~kv~fL~~lG~s~e~I~~mv~r~P~lL~~S~e~Lk~k~~fL~~~ 423 (519)
++.|+-|++|||+.+++.+.+..+=. ++..-++||...
T Consensus 20 e~~v~~L~~MGF~~~~a~~AL~~~~~-------n~e~A~~~Lls~ 57 (63)
T d1wgna_ 20 RQCVETVVNMGYSYECVLRAMKKKGE-------NIEQILDYLFAH 57 (63)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHCS-------CHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCC-------CHHHHHHHHHhC
Confidence 45689999999999999888776521 355567777754
No 11
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.68 E-value=19 Score=25.78 Aligned_cols=37 Identities=22% Similarity=0.210 Sum_probs=27.8
Q ss_pred HHhHHHHHHhCCcHHHHHHHHHhcCchhccCHHHHHHHHHHHHH
Q 010056 379 TRHVDFLKSCGFFLQQVRQIVVECPQVLALNLDIMKLSFDYFQR 422 (519)
Q Consensus 379 ~~kv~fL~~lG~s~e~I~~mv~r~P~lL~~S~e~Lk~k~~fL~~ 422 (519)
.+.+.-|++|||+.+++.+.+..+-. ++..-++||..
T Consensus 30 ~~~i~~L~~MGF~~~~a~~AL~~~~~-------n~e~Av~~Lls 66 (73)
T d1wiva_ 30 QSSVDTLLSFGFAEDVARKALKASGG-------DIEKATDWVFN 66 (73)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHTTS-------CHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHcCC-------CHHHHHHHHHc
Confidence 35588899999999999988877622 45556777765
No 12
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.19 E-value=13 Score=28.88 Aligned_cols=23 Identities=13% Similarity=0.294 Sum_probs=15.2
Q ss_pred CCCChhHHHHHHhhcCccccccc
Q 010056 172 LGVRKSTFTEFLRRYPQVLHSSV 194 (519)
Q Consensus 172 lGls~~~i~~ll~~~P~iL~~s~ 194 (519)
..++.+++..++..+|.++...+
T Consensus 71 ~~ls~~e~i~~i~~~P~LikRPI 93 (114)
T d1rw1a_ 71 ADLDEAKAIELMLAQPSMIKRPV 93 (114)
T ss_dssp TTCCHHHHHHHHHHCGGGBCSCE
T ss_pred ccccHHHHHHHHHhCcceEeCCE
Confidence 34666777777777777666654
No 13
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.94 E-value=22 Score=25.45 Aligned_cols=38 Identities=13% Similarity=0.221 Sum_probs=26.5
Q ss_pred HHhHHHHHHhCCcHHHHHHHHHhcCchhccCHHHHHHHHHHHHHH
Q 010056 379 TRHVDFLKSCGFFLQQVRQIVVECPQVLALNLDIMKLSFDYFQRE 423 (519)
Q Consensus 379 ~~kv~fL~~lG~s~e~I~~mv~r~P~lL~~S~e~Lk~k~~fL~~~ 423 (519)
++.++-|++|||+.+++.+.+..+-. ++..-++||...
T Consensus 30 ee~i~~L~~MGF~~~~a~~AL~~~~~-------n~e~A~~~Ll~~ 67 (73)
T d1vg5a_ 30 EEQIQKLVAMGFDRTQVEVALAAADD-------DLTVAVEILMSQ 67 (73)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHTS-------CHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCC-------CHHHHHHHHHhC
Confidence 45577899999999998877766432 355556777653
No 14
>d1k6ya1 a.4.10.1 (A:1-46) N-terminal Zn binding domain of HIV integrase {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=24.75 E-value=24 Score=22.99 Aligned_cols=29 Identities=14% Similarity=0.181 Sum_probs=23.5
Q ss_pred HHHHhHHHHHH-hCCcHHHHHHHHHhcCch
Q 010056 377 AVTRHVDFLKS-CGFFLQQVRQIVVECPQV 405 (519)
Q Consensus 377 ~l~~kv~fL~~-lG~s~e~I~~mv~r~P~l 405 (519)
+.-.....|.. +|++..+++++|..||.+
T Consensus 14 k~H~n~~~L~~~F~ip~~vAr~IV~~C~~C 43 (46)
T d1k6ya1 14 KYHSNWRAMASDFNLPPVVAKEIVASCDKC 43 (46)
T ss_dssp HHCCCHHHHHHHHTCCHHHHHHHHHHCTTC
T ss_pred HHhcCHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 34445677776 999999999999999975
No 15
>d1rxwa1 a.60.7.1 (A:220-324) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.46 E-value=64 Score=24.22 Aligned_cols=13 Identities=15% Similarity=0.217 Sum_probs=6.0
Q ss_pred hCCcHHHHHHHHH
Q 010056 388 CGFFLQQVRQIVV 400 (519)
Q Consensus 388 lG~s~e~I~~mv~ 400 (519)
+||+.+.+...+.
T Consensus 89 ~~F~~~rv~~~l~ 101 (105)
T d1rxwa1 89 HDFSRERVEKALE 101 (105)
T ss_dssp TCCCHHHHHHHHG
T ss_pred hCCCHHHHHHHHH
Confidence 4555444444443
No 16
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=23.35 E-value=33 Score=28.35 Aligned_cols=57 Identities=16% Similarity=0.345 Sum_probs=38.7
Q ss_pred chHHHHHHHHhcCCCCCChhHHhhhCccccccccccchhhHHHHHHHhCCChhHHHHHHhhCccccccccccchhhHH
Q 010056 197 DLAPVVKYLQGLDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREIGGVLTRYPDILGMRVGRVIKPFV 274 (519)
Q Consensus 197 ~l~p~v~fL~~lG~s~~~I~~il~~~P~lL~~s~e~~l~p~v~fL~~lGv~~~~I~~ll~~~P~lL~~s~e~~l~p~v 274 (519)
.+.+....|.++|+. |++. ...-.+|++.|++-.+|.+ ++.+|.+|.-.+. .+-|++
T Consensus 13 ~l~~la~~L~~~g~~-------------IisT------gGTak~L~~~Gi~v~~Vs~-~Tg~peil~gRvK-TLhp~i 69 (157)
T d1zcza1 13 KYLDILRELHEKGWE-------------IWAS------SGTAKFLKSNGIEANDVST-ITGFENLLGGLVK-TLHPEI 69 (157)
T ss_dssp GGHHHHHHHHHTTCE-------------EEEC------HHHHHHHHHTTCCCEEGGG-GSCCCCGGGGTTT-TCCHHH
T ss_pred chHHHHHHHHHCCCE-------------EEEc------ChHHHHHHHhhhhhhHHHH-HhhHHHHHHhhhc-cchHHH
Confidence 567777777777762 2222 2345788888888888877 5688888877776 566653
No 17
>d2pfxa1 a.152.1.3 (A:1-190) Uncharacterized protein TM1040_2465 {Silicibacter sp. tm1040 [TaxId: 292414]}
Probab=22.41 E-value=1.7e+02 Score=23.75 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=25.7
Q ss_pred HHHHHHhCCcHHHHHHHHHhcCchhccCHHHHHHHHHHHHHHhCCChh
Q 010056 382 VDFLKSCGFFLQQVRQIVVECPQVLALNLDIMKLSFDYFQREMQRPLD 429 (519)
Q Consensus 382 v~fL~~lG~s~e~I~~mv~r~P~lL~~S~e~Lk~k~~fL~~~mg~~~~ 429 (519)
++-|++.||+.++|..++.-. + +-.-++.+.+.+|++++
T Consensus 144 ~~~L~~~G~sd~eI~el~~~i----a-----~~~~~nr~~~~lgv~pd 182 (190)
T d2pfxa1 144 REVLRSHGFNDRDIWDIANVT----G-----FFNMTNRVASATAMMPN 182 (190)
T ss_dssp HHHHHHTTCCHHHHHHHHHHH----H-----HHHHHHHHHHHHTCCCC
T ss_pred HHHHHHCCCCHHHHHHHHHHH----H-----HHHHHHHHHHHcCCCCC
Confidence 677888999999998775321 1 22334556677888763
No 18
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.95 E-value=43 Score=23.07 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=11.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHh
Q 010056 272 PFVEYLESLGIPRLAVARLIEK 293 (519)
Q Consensus 272 p~v~~L~~lG~~~~~i~~iI~~ 293 (519)
..|+-|.+||++++.+.+.+..
T Consensus 21 ~~v~~L~~MGF~~~~a~~AL~~ 42 (63)
T d1wgna_ 21 QCVETVVNMGYSYECVLRAMKK 42 (63)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 3455555566655555555443
No 19
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.08 E-value=51 Score=28.16 Aligned_cols=59 Identities=24% Similarity=0.477 Sum_probs=42.3
Q ss_pred cchHHHHHHHHhcCCCCCChhHHhhhCccccccccccchhhHHHHHHHhCCChhHHHHHHhhCccccccccccchhhHHH
Q 010056 196 VDLAPVVKYLQGLDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREIGGVLTRYPDILGMRVGRVIKPFVE 275 (519)
Q Consensus 196 ~~l~p~v~fL~~lG~s~~~I~~il~~~P~lL~~s~e~~l~p~v~fL~~lGv~~~~I~~ll~~~P~lL~~s~e~~l~p~v~ 275 (519)
..+.+...+|.++|+. |++. .....||++.|++..+|.++ +.+|.++.-.+. +|-|++-
T Consensus 13 ~~l~~la~~L~~~g~~-------------IisT------gGTak~L~~~gi~v~~Vs~~-tg~peil~GRVK-TLhPkI~ 71 (197)
T d1g8ma1 13 AGLVEFARSLNALGLG-------------LIAS------GGTATALRDAGLPVRDVSDL-TGFPEMLGGRVK-TLHPAVH 71 (197)
T ss_dssp TTHHHHHHHHHHTTCE-------------EEEC------HHHHHHHHHTTCCCEEHHHH-HSCCCBGGGTBS-SCSHHHH
T ss_pred cCHHHHHHHHHHCCCE-------------EEEC------cHHHHHHHHhcccHHHHHhh-hcCHHHHHHHHh-hccceee
Confidence 3577777777777762 2322 23557899999998888885 799999988777 5777653
No 20
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.31 E-value=36 Score=23.43 Aligned_cols=39 Identities=10% Similarity=0.266 Sum_probs=29.2
Q ss_pred HhHHHHHHhCCcHHHHHHHHHhcCchhccCHHHHHHHHHHHHHHhC
Q 010056 380 RHVDFLKSCGFFLQQVRQIVVECPQVLALNLDIMKLSFDYFQREMQ 425 (519)
Q Consensus 380 ~kv~fL~~lG~s~e~I~~mv~r~P~lL~~S~e~Lk~k~~fL~~~mg 425 (519)
+.++-|.+|||+...+.+.+..+- ..+..-++||...+.
T Consensus 11 ~~v~~L~~MGF~~~~a~~AL~~~~-------~~~e~A~~wL~~~~~ 49 (63)
T d1wjia_ 11 KALKHITEMGFSKEASRQALMDNG-------NNLEAALNVLLTSNK 49 (63)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHTT-------SCHHHHHHHHHHHSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhC-------CCHHHHHHHHHHCCC
Confidence 457888999999999988877662 146667888887653
Done!